Oenococcus kitaharae DSM 17330 plasmid unnamed, whole genome shotgun sequence.
type: Entry
definition: Oenococcus kitaharae DSM 17330 plasmid unnamed, whole genome shotgun sequence.
sequence version: NZ_CM001399.1
sequence date: 2023-04-12
sequence: sequence
division: CON
label: NZ_CM001399.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02471115
keyword: WGS
keyword: RefSeq
source: Oenococcus kitaharae DSM 17330
organism: Oenococcus kitaharae DSM 17330
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Oenococcus.
reference: 1
references: 22235313
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM001399.1.\nBacteria available from the German Collection of Microorganisms and\nCell Cultures (DSMZ).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: MIRA v. 3.2.1\nGenome Coverage :: 50x\nSequencing Technology :: Illumina GA IIx paired-end sequencing\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/12/2023 00:41:10\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,874\nCDSs (total) :: 1,820\nGenes (coding) :: 1,795\nCDSs (with protein) :: 1,795\nGenes (RNA) :: 54\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 45\nncRNAs :: 3\nPseudo Genes (total) :: 25\nCDSs (without protein) :: 25\nPseudo Genes (ambiguous residues) :: 0 of 25\nPseudo Genes (frameshifted) :: 5 of 25\nPseudo Genes (incomplete) :: 19 of 25\nPseudo Genes (internal stop) :: 2 of 25\nPseudo Genes (multiple problems) :: 1 of 25\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 8313
topology: circular
so has quality: SO_0000988
location: 1..8313
location: region:1-8313:1
RO_0002162: 1045004

NZ_CM001399
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02471115
type: BioSample
SIO_000068: biosample

1
title: Functional divergence in the genus Oenococcus as predicted by genome sequencing of the newly-described species, Oenococcus kitaharae
author: Borneman, A.R.
author: McCarthy, J.M.
author: Chambers, P.J.
author: Bartowsky, E.J.
journal: PLoS One 7 (1), e29626 (2012)
pubmed: 22235313

22235313
type: PubMed
SIO_000068: pubmed

2
title: Functional divergence in the genus Oenococcus as predicted by genome sequencing of the newly-described species, Oenococcus kitaharae
author: Borneman, A.R.
author: McCarthy, J.
author: Chambers, P.J.
author: Bartowsky, E.J.
journal: Unpublished

3
title: Direct Submission
author: Borneman, A.R.
author: McCarthy, J.
author: Chambers, P.J.
author: Bartowsky, E.J.
journal: Submitted (10-AUG-2011) Wine Biosciences, The Australian Wine Research Institute, PO Box 197, Glen Osmond, South Australia 5064, Australia

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8313:1
position: 8313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-8313:1:source
so part of: sequence
organism: Oenococcus kitaharae DSM 17330
mol type: genomic DNA
strain: DSM 17330
culture collection: DSM:17330
type material: type strain of Oenococcus kitaharae
plasmid: unnamed

1045004
type: Taxonomy
SIO_000068: taxonomy

OKIT_RS09665
type: Gene
subclass of: SO_0000704
RO_0002162: 1045004
locus tag: OKIT_RS09665
old locus tag: OKIT_1884
so part of: sequence
location: join(8149..8313,1..27)
location: region:1-8313:1
so has part: feature:8149-8313:1:exon
so has part: feature:1-27:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:8149-8313:1:exon

position:8149:1
position: 8149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-27:1:exon

position:27:1
position: 27
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OKIT_RS09665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1045004
locus tag: OKIT_RS09665
old locus tag: OKIT_1884
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKENVCFVLALIVGFAGLALFHGLVSNISIGIAAVLILLSLIFESVRKVKNVAQLIHHREQK
SIO_010081: OKIT_RS09665
subclass of: SO_0000673
so part of: OKIT_RS09665
location: join(8149..8313,1..27)
location: region:1-8313:1
so has part: feature:8149-8313:1:exon
so has part: feature:1-27:1:exon

WP_007747423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8149-8313:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-27:1:exon

OKIT_RS09670
type: Gene
subclass of: SO_0000704
RO_0002162: 1045004
locus tag: OKIT_RS09670
old locus tag: OKIT_1873
so part of: sequence
location: 127..1395
location: region:127-1395:1
so has part: feature:127-1395:1:exon
subclass of: SO_0000010

position:127:1
position: 127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1395:1
position: 1395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127-1395:1:exon

OKIT_RS09670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1045004
locus tag: OKIT_RS09670
old locus tag: OKIT_1873
inference: COORDINATES: protein motif:HMM:NF013727.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FtsK/SpoIIIE domain-containing protein
translation: MYYKNDLLRLQGLVNLLILIFQVPFLFSFPLLIRLIGLLFGFWLLFKDIKYFHKLRLFFRFKFSYEADLLTMAYEQGLAHSKFMYRIEENLFHFRIFKDYTPELAKVEALDKPLMATLNLPLKSKIVNEQSVDYYFQLKKPERLVYNPQASELTDDLALAINLGYGMVYNPAKAPHILVSGGTGSGKSVFISFLVLELLKRKSDLYVVDPKHSDLSALKSYLPDGHVATSLNEIAKATRLVVEEMQRRYDEMNAPENFKYGSNFQGHNYRSVWLLFDELAGFQAMGATKEARSTIQEVMNNLTQIVLLGRQAGCFLLFSAQQMNSNTLPTELRDNLGCRIALGANSSEGYRMVFGGHIPEVIPQTSVKGSGLIYIDGTGKQEAEYWEAPFMDMKKFNFLDEIKKLCDLTNSSEDLASNKNAL
SIO_010081: OKIT_RS09670
subclass of: SO_0000673
so part of: OKIT_RS09670
location: 127..1395
location: region:127-1395:1
so has part: feature:127-1395:1:exon

WP_169311637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127-1395:1:exon

OKIT_RS09225
type: Gene
subclass of: SO_0000704
RO_0002162: 1045004
locus tag: OKIT_RS09225
so part of: sequence
location: 1492..1803
location: region:1492-1803:1
so has part: feature:1492-1803:1:exon
subclass of: SO_0000010

position:1492:1
position: 1492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1803:1
position: 1803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1492-1803:1:exon

OKIT_RS09225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1045004
locus tag: OKIT_RS09225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003757099.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLEDFLDTSKLGNNFLAVGAYEEVNDHETGKLTAYRLNVSIQSQESPFYFEMIPVKVKTLAPTVSVEQLAKAKTTPVELKDLNMGQYNGALWFNCTDVLPKK
SIO_010081: OKIT_RS09225
subclass of: SO_0000673
so part of: OKIT_RS09225
location: 1492..1803
location: region:1492-1803:1
so has part: feature:1492-1803:1:exon

WP_028291659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1492-1803:1:exon

OKIT_RS09230
type: Gene
subclass of: SO_0000704
RO_0002162: 1045004
locus tag: OKIT_RS09230
old locus tag: OKIT_1875
so part of: sequence
location: 2034..2879
location: region:2034-2879:1
so has part: feature:2034-2879:1:exon
subclass of: SO_0000010

position:2034:1
position: 2034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2879:1
position: 2879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2034-2879:1:exon

OKIT_RS09230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1045004
locus tag: OKIT_RS09230
old locus tag: OKIT_1875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004269869.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFDTKVAKTSSYVEIWKYDKPVSQNELVSQKEKKSAKRKSFEELTPTEKQKQLSRLKKHRQEAKWRLLRLIDTNFDLKTSFITLTTKENIQDRDQFNKLFMQFVKRYNYWVFQTKTAQLKYVACLERQKRGSWHAHCLFFDVPFVPHKELSRIWKQGAVRINKLNELDDVANAGRYCVKYMEKGIGQELLESLGKKSYLHSNNLKSPIEFRYLSGKPLVVDPSLVAFETEYDSKVFFKHELISNPVHYFKIPIHQANQEAVKKLLSNRSFENLNIEDRVYN
SIO_010081: OKIT_RS09230
subclass of: SO_0000673
so part of: OKIT_RS09230
location: 2034..2879
location: region:2034-2879:1
so has part: feature:2034-2879:1:exon

WP_007747428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2034-2879:1:exon

OKIT_RS09235
type: Gene
subclass of: SO_0000704
RO_0002162: 1045004
locus tag: OKIT_RS09235
old locus tag: OKIT_1876
so part of: sequence
location: 3000..3587
location: region:3000-3587:1
so has part: feature:3000-3587:1:exon
subclass of: SO_0000010

position:3000:1
position: 3000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3587:1
position: 3587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3000-3587:1:exon

OKIT_RS09235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1045004
locus tag: OKIT_RS09235
old locus tag: OKIT_1876
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005917937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MRQIVLPIKDSNILKEVQDTLLNNFQAGRRNYTIFQVGKATLLRVSDVMRLRWVDVFNKNATVRQNAFIHDKKTGKANLLYLKPVQTDLLAYQTWLQENHLVSEWLFPSLQHPDRHITEKQFYKIMAKVGDLLGINYLGTHTMRKTGAYRVYTQSNYNIGLVMHLLNHSSEAMTLAYLGLDQASQETLLDQIDFG
SIO_010081: OKIT_RS09235
subclass of: SO_0000673
so part of: OKIT_RS09235
location: 3000..3587
location: region:3000-3587:1
so has part: feature:3000-3587:1:exon

WP_007747431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3000-3587:1:exon

OKIT_RS09240
type: Gene
subclass of: SO_0000704
RO_0002162: 1045004
locus tag: OKIT_RS09240
old locus tag: OKIT_1877
so part of: sequence
location: 3700..3996
location: region:3700-3996:1
so has part: feature:3700-3996:1:exon
subclass of: SO_0000010

position:3700:1
position: 3700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3996:1
position: 3996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3700-3996:1:exon

OKIT_RS09240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1045004
locus tag: OKIT_RS09240
old locus tag: OKIT_1877
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: RelB/DinJ family addiction module antitoxin
translation: MATLEKEKDRRQVSFKSNTALVKKARKVFAEQDLNLTEVMNEFLEHVAQTGVIPFKTKTDKKREQMITDLKSQIDKSFASYEAGHVVSQEEMKARYGL
SIO_010081: OKIT_RS09240
subclass of: SO_0000673
so part of: OKIT_RS09240
location: 3700..3996
location: region:3700-3996:1
so has part: feature:3700-3996:1:exon

WP_007747433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3700-3996:1:exon

OKIT_RS09245
type: Gene
subclass of: SO_0000704
RO_0002162: 1045004
locus tag: OKIT_RS09245
old locus tag: OKIT_1878
so part of: sequence
location: 3986..4330
location: region:3986-4330:1
so has part: feature:3986-4330:1:exon
subclass of: SO_0000010

position:3986:1
position: 3986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4330:1
position: 4330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3986-4330:1:exon

OKIT_RS09245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1045004
locus tag: OKIT_RS09245
old locus tag: OKIT_1878
inference: COORDINATES: protein motif:HMM:NF016876.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MVSKHYEIKYAIEVSDKIDQIYAYTLNLSRSKETAQKTVGQLILAIDRLNVFPEAGLDIDQKIGVQLRPPYKTYGLIAGKYIVIYEIVESSVVLISQILAANSDWIELLTKQAN
SIO_010081: OKIT_RS09245
subclass of: SO_0000673
so part of: OKIT_RS09245
location: 3986..4330
location: region:3986-4330:1
so has part: feature:3986-4330:1:exon

WP_007747436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3986-4330:1:exon

OKIT_RS09250
type: Gene
subclass of: SO_0000704
RO_0002162: 1045004
locus tag: OKIT_RS09250
old locus tag: OKIT_1879
so part of: sequence
location: 4651..5493
location: region:4651-5493:1
so has part: feature:4651-5493:1:exon
subclass of: SO_0000010

position:4651:1
position: 4651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5493:1
position: 5493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4651-5493:1:exon

OKIT_RS09250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1045004
locus tag: OKIT_RS09250
old locus tag: OKIT_1879
inference: COORDINATES: protein motif:HMM:NF013235.2
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MDKIVKYANEMNKVSFRQLTASEYDTLFAIVSQIKDQGARELTLSFDQIKSLIRWDKSQREELFVKTLINMYDKIINLKFNRTSDDGNIISRFVVFSRYSINKEKQTALIAVSADFWQLFNLLFDNFTTFMLDDLVYISTSYGKELFRNIKQFRTQGYLYWSIEIFRQKLMVPDSFSTGKAFQRVFGKRTLKQLQTAIPGFTYKKKTSRKRGNPVIGIEFSWNAEKFNEDYLKRNTSKKDFVQLELLNQTAEKQKSAKKKLSERTIPLTKIGKNDEPLLR
SIO_010081: OKIT_RS09250
subclass of: SO_0000673
so part of: OKIT_RS09250
location: 4651..5493
location: region:4651-5493:1
so has part: feature:4651-5493:1:exon

WP_007747439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4651-5493:1:exon

OKIT_RS09255
type: Gene
subclass of: SO_0000704
RO_0002162: 1045004
locus tag: OKIT_RS09255
old locus tag: OKIT_1880
so part of: sequence
location: 5508..5999
location: region:5508-5999:1
so has part: feature:5508-5999:1:exon
subclass of: SO_0000010

position:5508:1
position: 5508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5999:1
position: 5999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5508-5999:1:exon

OKIT_RS09255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1045004
locus tag: OKIT_RS09255
old locus tag: OKIT_1880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDKSHTIKELADHFSKSKTAIRSALKHANISAVSTPTSTLNSALKYDDSALAYLNKKYGVKANMTKISVGDGQHTQQSNSTLKSANQRTISALIEQLDVLHEQLKVKDGQLSNKDKQIEELHTLLDQSQKLNLSDKKPALVAEKTNKKSLGFFKRLFGADNH
SIO_010081: OKIT_RS09255
subclass of: SO_0000673
so part of: OKIT_RS09255
location: 5508..5999
location: region:5508-5999:1
so has part: feature:5508-5999:1:exon

WP_007747451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5508-5999:1:exon

OKIT_RS09260
type: Gene
subclass of: SO_0000704
RO_0002162: 1045004
locus tag: OKIT_RS09260
old locus tag: OKIT_1881
so part of: sequence
location: 6022..6510
location: region:6022-6510:1
so has part: feature:6022-6510:1:exon
subclass of: SO_0000010

position:6022:1
position: 6022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6510:1
position: 6510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6022-6510:1:exon

OKIT_RS09260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1045004
locus tag: OKIT_RS09260
old locus tag: OKIT_1881
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002392593.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKVTILSRASFLTYVPDLPKEQVVAIRIGDKRAPLKDSASQYYLDSLSMAFFDERTLFEDQINRSYGTGSNMFSEKDKRLVDDFVDKYQDKYFVIHCEEGKSRSAAIGYYILKKLGCTKELNQKKESGRFDPNPQVYGLLIGKPYTMGNAGEVTTELITSE
SIO_010081: OKIT_RS09260
subclass of: SO_0000673
so part of: OKIT_RS09260
location: 6022..6510
location: region:6022-6510:1
so has part: feature:6022-6510:1:exon

WP_007747452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6022-6510:1:exon

OKIT_RS09265
type: Gene
subclass of: SO_0000704
RO_0002162: 1045004
locus tag: OKIT_RS09265
old locus tag: OKIT_1882
so part of: sequence
location: 6535..6927
location: region:6535-6927:1
so has part: feature:6535-6927:1:exon
subclass of: SO_0000010

position:6535:1
position: 6535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6927:1
position: 6927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6535-6927:1:exon

OKIT_RS09265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1045004
locus tag: OKIT_RS09265
old locus tag: OKIT_1882
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRQTVRLSIDTLKGIKILKKNYENEFNGLKLNQGYVVSKAFIDTKSNLKDGESWKKIRDEKFPLGDFNGIEKTEESRTTLDLSDDVLKGIDKMKQDLPGPFSVNWVTTGYCIRLIVKAGLLKLRGEQKSN
SIO_010081: OKIT_RS09265
subclass of: SO_0000673
so part of: OKIT_RS09265
location: 6535..6927
location: region:6535-6927:1
so has part: feature:6535-6927:1:exon

WP_007747453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6535-6927:1:exon

OKIT_RS09270
type: Gene
subclass of: SO_0000704
RO_0002162: 1045004
locus tag: OKIT_RS09270
old locus tag: OKIT_1883
so part of: sequence
location: 7073..7882
location: region:7073-7882:1
so has part: feature:7073-7882:1:exon
subclass of: SO_0000010

position:7073:1
position: 7073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7882:1
position: 7882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7073-7882:1:exon

OKIT_RS09270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1045004
locus tag: OKIT_RS09270
old locus tag: OKIT_1883
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: endonuclease/exonuclease/phosphatase
translation: MKLLEWNLNGRTKGNSDLAVELIGDSVARISPDGLVFTEYIRNQYLTSLLQEQGFVISEDNAGQPNGVLLAVKKDCFEITREIDLVPSESNPNFHLIQVKNRKDASQNFTLAGVRIQVGREHGEADYNNDFKRRMEQLAVLILELKGSDVGSLFAMGDFNNAPYKDSDSVDSYAGRARQFYSYPLLRQELNDHDLALITPLDASSCGALRLDHLVSSYRDQVKKIIYDWSFTGDRRYRKNVVGFPDHAMLIADVSTNPVKPKALEGALL
SIO_010081: OKIT_RS09270
subclass of: SO_0000673
so part of: OKIT_RS09270
location: 7073..7882
location: region:7073-7882:1
so has part: feature:7073-7882:1:exon

WP_007747454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7073-7882:1:exon