Fusarium musae strain F31 chromosome 2, whole genome shotgun sequence.
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium.
Telomere to telomere genome assembly of Fusarium musae F31, causal agent of crown rot disease of banana
Mol Plant Microbe Interact (2021) In press
Publication Status: Available-Online prior to print
Submitted (23-NOV-2021) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (01-JAN-2019) DeFENS, University of Milan, via Celoria 2, Milano 20133, Italy
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM034115.\n'Annotated using 1.8.7'.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 10-FEB-2021\nAssembly Method :: Canu v. 1.8; Medaka v. 1.0.3+; Minimap2\n v. 2.17+; Pilon v. 1.20.1; Shovill v.\n 1.1.0+\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 250.0x\nSequencing Technology :: Illumina HiSeq; Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
CAZy:GT2_Glyco_tranf_2; EggNog:ENOG41; CAZy:GT2_Glycos_transf
EggNog:ENOG41; SMCOG1100:3-hydroxyisobutyrate dehydrogenase; antiSMASH:Cluster_2.1
EggNog:ENOG41; antiSMASH:Cluster_2.1; SMCOG1087:hypothetical protein
putative NRPS-like protein biosynthetic cluster
EggNog:ENOG41; antiSMASH:Cluster_2.1; SMCOG1002:AMP-dependent synthetase and ligase
MEROPS:MER0026469; antiSMASH:Cluster_2.1
EggNog:ENOG41; antiSMASH:Cluster_2.1; SMCOG1106:major facilitator transporter
EggNog:ENOG41; CAZy:CE10; MEROPS:MER0039263
Bifunctional cytokinin biosynthesis protein
putative choline transporter, neither null mutation nor overexpression affects choline transport
antiSMASH:Cluster_2.2; SMCOG1038:phenylalanine-specific permease
antiSMASH:Cluster_2.2; EggNog:ENOG41; SMCOG1002:AMP-dependent synthetase and ligase
antiSMASH:Cluster_2.2; EggNog:ENOG41; MEROPS:MER0019360
E3 ubiquitin ligase complex SCF subunit scon-2
EggNog:ENOG41; SMCOG1034:cytochrome P450; antiSMASH:Cluster_2.3
SMCOG1034:cytochrome P450; antiSMASH:Cluster_2.3
EggNog:ENOG41; antiSMASH:Cluster_2.3; MEROPS:MER0033188
EggNog:ENOG41; SMCOG1022:Beta-ketoacyl synthase; antiSMASH:Cluster_2.3
EggNog:ENOG41; BUSCO:EOG09264KO7; antiSMASH:Cluster_2.4
nucleolar DEAD-box protein required for synthesis of 60S ribosomal subunit
EggNog:ENOG41; SMCOG1122:ATP-dependent RNA helicase; antiSMASH:Cluster_2.4
EggNog:ENOG41; SMCOG1271:2-isopropylmalate synthase; antiSMASH:Cluster_2.4
antiSMASH:Cluster_2.4; BUSCO:EOG09260OLB
EggNog:ENOG41; antiSMASH:Cluster_2.4; SMCOG1002:AMP-dependent synthetase and ligase
EggNog:ENOG41; BUSCO:EOG092620FM; antiSMASH:Cluster_2.4
pre-mRNA cleavage and polyadenylation factor (CPF) complex subunit
Mitochondrial inner membrane organizing system component
mRNA turnover and ribosome assembly protein
mitochondrial import inner membrane translocase subunit TIM14
ATPase-activating ribosome biosynthesis protein
Guanine nucleotide-binding protein subunit gamma
eukaryotic translation initiation factor 3 subunit A
5-aminolevulinate synthase, mitochondrial
transcription factor TFIIH complex ERCC-3 subunit
retention in endoplasmic reticulum protein 1
Peptidyl-prolyl cis-trans isomerase pin4
Histidine biosynthesis bifunctional protein hisB
NuA4 histone H4 acetyltransferase complex and the SWR1 complex subunit
TATA-binding protein-associated factor mot1
BUSCO:EOG09262QL6; EggNog:ENOG41; MEROPS:MER0064621
Histone acetyltransferase type B subunit 2
Mitochondrial inner membrane m-AAA protease component
eukaryotic translation initiation factor 2 subunit gamma
Cytoplasmic and mitochondrial histidine tRNA synthetase
E3 ubiquitin ligase complex SCF subunit scon-3
Eukaryotic peptide chain release factor subunit 1
actin organization and endocytosis protein
SMCOG1094:ferredoxin; antiSMASH:Cluster_2.5
EggNog:ENOG41; antiSMASH:Cluster_2.5; SMCOG1272:TPR repeat-containing protein; BUSCO:EOG09260EAZ
BUSCO:EOG092603D0; antiSMASH:Cluster_2.5; SMCOG1002:AMP-dependent synthetase and ligase
Sorting nexin, cytoplasm-to-vacuole targeting pathway/endosomal sorting
BUSCO:EOG09262K8L; antiSMASH:Cluster_2.5
antiSMASH:Cluster_2.5; BUSCO:EOG09262PMC
BUSCO:EOG0926115P; antiSMASH:Cluster_2.5
Mitochondrial inner membrane protease atp23
NAD(P)H-dependent D-xylose reductase (XR)
H(+)-transporting V1 sector ATPase subunit A
Fe-S cluster-binding ribosome biosynthesis protein
vacuolar protein sorting-associated protein 1
centromere/microtubule-binding protein cbf5
translocase of outer mitochondrial membrane
succinate dehydrogenase flavoprotein subunit
putative tRNA threonylcarbamoyladenosine biosynthesis protein kae1
serine/threonine protein kinase, CMGC, CDC2/CDK sub
type I protein arginine N-methyltransferase Rmt1
Uracil phosphoribosyltransferase, synthesizes UMP from uracil
Alternative oxidase, mitochondrial precursor
Protoheme IX farnesyltransferase, mitochondrial
EggNog:ENOG41; antiSMASH:Cluster_2.6; SMCOG1169:sugar transport protein
EggNog:ENOG41; SMCOG1127:condensation domain-containing protein; antiSMASH:Cluster_2.6
putative secondary metabolism biosynthetic enzyme
EggNog:ENOG41; antiSMASH:Cluster_2.6; SMCOG1040:alcohol dehydrogenase
Fusaric acid cluster transcription factor fub12
EggNog:ENOG41; antiSMASH:Cluster_2.7; SMCOG1169:sugar transport protein
Fusaric acid cluster transcription factor fub10
Non-canonical non-ribosomal peptide synthetase fub8
EggNog:ENOG41; antiSMASH:Cluster_2.7; SMCOG1002:AMP-dependent synthetase and ligase
EggNog:ENOG41; SMCOG1168:O-succinylhomoserine sulfhydrylase; antiSMASH:Cluster_2.7
EggNog:ENOG41; SMCOG1028:crotonyl-CoA reductase / alcohol dehydrogenase; antiSMASH:Cluster_2.7
antiSMASH:Cluster_2.7; SMCOG1170:metallo-beta-lactamase family protein
EggNog:ENOG41; SMCOG1006:acyl-CoA dehydrogenase; antiSMASH:Cluster_2.7
EggNog:ENOG41; CAZy:CE10; antiSMASH:Cluster_2.7; MEROPS:MER0033188
EggNog:ENOG41; SMCOG1022:Beta-ketoacyl synthase; antiSMASH:Cluster_2.7
EggNog:ENOG41; MEROPS:MER0044357; antiSMASH:Cluster_2.8
SMCOG1030:serine/threonine protein kinase; antiSMASH:Cluster_2.8