Yersinia pestis A1122 plasmid unnamed2, complete sequence.
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia.
Finished sequence of Yersinia pestis A1122
Submitted (14-JUL-2011) Genome Sciences Group, Los Alamos National Laboratory, P.O. Box 1663, Los Alamos, NM 87545, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP002958.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/07/2023 01:20:55\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,234\nCDSs (total) :: 4,138\nGenes (coding) :: 3,973\nCDSs (with protein) :: 3,973\nGenes (RNA) :: 96\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 68\nncRNAs :: 10\nPseudo Genes (total) :: 165\nCDSs (without protein) :: 165\nPseudo Genes (ambiguous residues) :: 0 of 165\nPseudo Genes (frameshifted) :: 72 of 165\nPseudo Genes (incomplete) :: 108 of 165\nPseudo Genes (internal stop) :: 24 of 165\nPseudo Genes (multiple problems) :: 31 of 165\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_002218512.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_001285181.1
COORDINATES: similar to AA sequence:RefSeq:WP_002221218.1
COORDINATES: similar to AA sequence:RefSeq:WP_002231174.1
COORDINATES: similar to AA sequence:RefSeq:WP_002218230.1
COORDINATES: similar to AA sequence:RefSeq:WP_002225538.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1
IS21-like element IS100 family transposase
COORDINATES: similar to AA sequence:RefSeq:NP_858162.1
IS21-like element IS100kyp family helper ATPase IstB