Leguminivora glycinivorella isolate SPB_JAAS2020 chromosome 23, LegGlyc_1.1, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Tortricoidea; Tortricidae; Olethreutinae; Grapholitini; Leguminivora.
REFSEQ INFORMATION: The reference sequence is identical to\nCM041143.1.\nAssembly name: LegGlyc_1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the USDA-ARS on 2022/04/22. The\noriginal whole-genome shotgun project has the accession\nJAKXMO000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: USDA-ARS\nAssembly Date :: 08-OCT-2021\nAssembly Method :: NextDeNovo v. 2.5.0\nAssembly Name :: LegGlyc_1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 85.48x\nSequencing Technology :: Oxford Nanopore GridION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Leguminivora glycinivorella\n Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
actin cytoskeleton-regulatory complex protein pan1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
COORDINATES: polyA evidence [ECO:0006239]
uncharacterized LOC125238323, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized LOC125238323, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized protein LOC125238323 isoform X2
uncharacterized protein LOC125238323 isoform X1
G protein-coupled receptor kinase 2, transcript variant X2
G protein-coupled receptor kinase 2, transcript variant X1
G protein-coupled receptor kinase 2 isoform X1
G protein-coupled receptor kinase 2 isoform X2
nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1, transcript variant X3
nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1, transcript variant X5
nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1 isoform X4
nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3 isoform X2
nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3 isoform X3
nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3 isoform X1
nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1 isoform X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 27% coverage of the annotated genomic feature by RNAseq alignments
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: cytochrome P450 6B1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
CCHC-type zinc finger nucleic acid binding protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
translocator protein-like, transcript variant X2
translocator protein-like, transcript variant X3
translocator protein-like, transcript variant X1
translocator protein-like, transcript variant X4
upstream activation factor subunit spp27
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
cilia- and flagella-associated protein 206-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
biorientation of chromosomes in cell division protein 1-like 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
28S ribosomal protein S18c, mitochondrial
ABC transporter G family member 23, transcript variant X1
ABC transporter G family member 23 isoform X1
ABC transporter G family member 23, transcript variant X2
ABC transporter G family member 23 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
aminopeptidase N-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
aminopeptidase N-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
aminopeptidase N-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
protein Skeletor, isoforms B/C, transcript variant X1
protein Skeletor, isoforms B/C, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
clathrin interactor 1, transcript variant X2
clathrin interactor 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized protein LOC125238435 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64% coverage of the annotated genomic feature by RNAseq alignments
nuclear hormone receptor family member nhr-8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transfer RNA aspartic acid (anticodon AUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transfer RNA serine (anticodon CGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 58% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA alanine (anticodon AGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA alanine (anticodon GGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
ankyrin repeat domain-containing protein EMB506, chloroplastic
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
protein Skeletor, isoforms B/C, transcript variant X3
protein Skeletor, isoforms D/E isoform X2
protein Skeletor, isoforms D/E isoform X1
protein Skeletor, isoforms D/E isoform X3
protein Skeletor, isoforms B/C, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
protein Skeletor, isoforms B/C isoform X4
protein Skeletor, isoforms B/C, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
protein Skeletor, isoforms B/C isoform X5
uncharacterized LOC125238473, transcript variant X1
uncharacterized protein LOC125238473 isoform X1
uncharacterized LOC125238473, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized protein LOC125238473 isoform X2
protein fem-1 homolog C, transcript variant X1
protein fem-1 homolog C, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
NADPH-dependent diflavin oxidoreductase 1
U3 small nucleolar ribonucleoprotein protein IMP4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125238282, transcript variant X1
uncharacterized protein LOC125238282 isoform X1
uncharacterized LOC125238282, transcript variant X2
uncharacterized protein LOC125238282 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
retinol dehydrogenase 14, transcript variant X4
retinol dehydrogenase 14, transcript variant X5
retinol dehydrogenase 14, transcript variant X3
retinol dehydrogenase 14, transcript variant X1
retinol dehydrogenase 14, transcript variant X2
erythroid differentiation-related factor 1
facilitated trehalose transporter Tret1-2 homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
facilitated trehalose transporter Tret1-2 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
facilitated trehalose transporter Tret1-2 homolog
facilitated trehalose transporter Tret1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
zinc finger protein on ecdysone puffs-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
facilitated trehalose transporter Tret1-2 homolog isoform X1
facilitated trehalose transporter Tret1-2 homolog isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
facilitated trehalose transporter Tret1-like, transcript variant X1
facilitated trehalose transporter Tret1-like, transcript variant X2
facilitated trehalose transporter Tret1-like isoform X1
facilitated trehalose transporter Tret1-like isoform X2
myrosinase 1-like, transcript variant X1
myrosinase 1-like, transcript variant X2
myrosinase 1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125238461, transcript variant X1
uncharacterized LOC125238461, transcript variant X2
uncharacterized protein LOC125238461 isoform X1
uncharacterized protein LOC125238461 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
mushroom body large-type Kenyon cell-specific protein 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
mushroom body large-type Kenyon cell-specific protein 1, transcript variant X2
mushroom body large-type Kenyon cell-specific protein 1, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
mushroom body large-type Kenyon cell-specific protein 1, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
mushroom body large-type Kenyon cell-specific protein 1 isoform X1
mushroom body large-type Kenyon cell-specific protein 1 isoform X2
mushroom body large-type Kenyon cell-specific protein 1 isoform X4
mushroom body large-type Kenyon cell-specific protein 1, transcript variant X3
transfer RNA proline (anticodon CGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
mushroom body large-type Kenyon cell-specific protein 1 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
flocculation protein FLO11-like, transcript variant X2
flocculation protein FLO11-like, transcript variant X4
flocculation protein FLO11-like, transcript variant X3
flocculation protein FLO11-like, transcript variant X5
flocculation protein FLO11-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized protein LOC125238426 isoform X2
uncharacterized protein LOC125238426 isoform X4
uncharacterized protein LOC125238426 isoform X3
uncharacterized protein LOC125238426 isoform X5
uncharacterized protein LOC125238426 isoform X1
flocculation protein FLO11-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
flocculation protein FLO11-like isoform X6
flocculation protein FLO11-like, transcript variant X7
uncharacterized protein LOC125238426 isoform X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
vacuolar protein sorting-associated protein 16B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
pollen-specific leucine-rich repeat extensin-like protein 2
solute carrier family 2, facilitated glucose transporter member 6-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
ornithine carbamoyltransferase, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
probable 28S ribosomal protein S25, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
probable G-protein coupled receptor No18
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 85% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA threonine (anticodon GGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
ABC transporter G family member 23-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ABC transporter G family member 23-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transfer RNA serine (anticodon GGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
protein phosphatase PP2A 55 kDa regulatory subunit, transcript variant X1
cytochrome b-c1 complex subunit 6, mitochondrial-like
serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1
protein phosphatase PP2A 55 kDa regulatory subunit, transcript variant X3
protein phosphatase PP2A 55 kDa regulatory subunit, transcript variant X2
protein phosphatase PP2A 55 kDa regulatory subunit isoform X3
protein phosphatase PP2A 55 kDa regulatory subunit isoform X2
uncharacterized LOC125238416, transcript variant X4
uncharacterized LOC125238416, transcript variant X3
uncharacterized LOC125238416, transcript variant X1
uncharacterized LOC125238416, transcript variant X2
uncharacterized protein LOC125238416 isoform X1
uncharacterized protein LOC125238416 isoform X2
uncharacterized protein LOC125238416 isoform X3
uncharacterized LOC125238293, transcript variant X2
uncharacterized LOC125238293, transcript variant X1
disintegrin and metalloproteinase domain-containing protein 12-like, transcript variant X1
disintegrin and metalloproteinase domain-containing protein 12-like, transcript variant X3
disintegrin and metalloproteinase domain-containing protein 12-like isoform X1
disintegrin and metalloproteinase domain-containing protein 12-like isoform X3
disintegrin and metalloproteinase domain-containing protein 12-like, transcript variant X2
uncharacterized protein LOC125238291 isoform X2
probable small nuclear ribonucleoprotein Sm D2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
disintegrin and metalloproteinase domain-containing protein 12-like isoform X2
F-box/LRR-repeat protein 7-like, transcript variant X2
F-box/LRR-repeat protein 7-like, transcript variant X4
F-box/LRR-repeat protein 7-like, transcript variant X3
F-box/LRR-repeat protein 7-like, transcript variant X1
F-box/LRR-repeat protein 7-like, transcript variant X6
F-box/LRR-repeat protein 7-like, transcript variant X5
uncharacterized protein LOC125238432 isoform X1
F-box/LRR-repeat protein 7-like isoform X3
uncharacterized protein LOC125238432 isoform X4
uncharacterized protein LOC125238432 isoform X2
glycerol-3-phosphate acyltransferase 1, mitochondrial
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
LOW QUALITY PROTEIN: glycerol-3-phosphate acyltransferase 1, mitochondrial
xenotropic and polytropic retrovirus receptor 1-like
LOW QUALITY PROTEIN: xenotropic and polytropic retrovirus receptor 1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: coatomer subunit alpha
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
leucine-rich repeat-containing protein 70-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC125238476, transcript variant X1
uncharacterized LOC125238476, transcript variant X2
uncharacterized protein LOC125238476 isoform X1
uncharacterized protein LOC125238476 isoform X2
GDNF-inducible zinc finger protein 1-like, transcript variant X2
GDNF-inducible zinc finger protein 1-like, transcript variant X1
GDNF-inducible zinc finger protein 1-like isoform X2
putative zinc finger and SCAN domain-containing protein 5D isoform X1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: phosphatidylinositide phosphatase SAC2
gastrula zinc finger protein XlCGF17.1-like
LOW QUALITY PROTEIN: equilibrative nucleoside transporter 2
uncharacterized LOC125238381, transcript variant X2
uncharacterized LOC125238381, transcript variant X1
uncharacterized protein LOC125238381 isoform X2
uncharacterized protein LOC125238381 isoform X1
vesicular integral-membrane protein VIP36
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: dosage compensation regulator
dynein light chain roadblock-type 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
28S ribosomal protein S10, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC125238285, transcript variant X2
uncharacterized LOC125238285, transcript variant X1
uncharacterized protein LOC125238285 isoform X1
uncharacterized protein LOC125238285 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA alanine (anticodon CGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125238478, transcript variant X2
uncharacterized LOC125238478, transcript variant X1
putative fatty acyl-CoA reductase CG5065
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transfer RNA phenylalanine (anticodon GAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
homeobox protein MSH-D-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
homeobox protein MSH-D-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
muscle segmentation homeobox-like isoform X1
uncharacterized LOC125238359, transcript variant X2
uncharacterized LOC125238359, transcript variant X3
uncharacterized LOC125238359, transcript variant X1
general transcription factor IIH subunit 3
ileal sodium/bile acid cotransporter-like, transcript variant X2
ileal sodium/bile acid cotransporter-like, transcript variant X1
ileal sodium/bile acid cotransporter-like, transcript variant X4
ileal sodium/bile acid cotransporter-like, transcript variant X3
sodium/bile acid cotransporter 5-like isoform X1
ileal sodium/bile acid cotransporter-like isoform X2
isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, transcript variant X2
isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, transcript variant X1
isocitrate dehydrogenase [NAD] subunit beta, mitochondrial isoform X2
probable isocitrate dehydrogenase [NAD] subunit beta, mitochondrial isoform X1
isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
probable isocitrate dehydrogenase [NAD] subunit beta, mitochondrial isoform X3
low molecular weight phosphotyrosine protein phosphatase-like
snRNA-activating protein complex subunit 4-like
uncharacterized LOC125238318, transcript variant X1
uncharacterized LOC125238318, transcript variant X2
uncharacterized protein LOC125238318 isoform X1
uncharacterized protein LOC125238318 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
cell growth-regulating nucleolar protein, transcript variant X1
cell growth-regulating nucleolar protein, transcript variant X2
cell growth-regulating nucleolar protein
uncharacterized LOC125238379, transcript variant X2
uncharacterized LOC125238379, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
casein kinase I-like, transcript variant X2
casein kinase I-like, transcript variant X3
casein kinase I-like, transcript variant X1
4-hydroxybutyrate coenzyme A transferase, transcript variant X1
4-hydroxybutyrate coenzyme A transferase, transcript variant X2
4-hydroxybutyrate coenzyme A transferase isoform X1
4-hydroxybutyrate coenzyme A transferase isoform X2
V-type proton ATPase subunit B, transcript variant X1
V-type proton ATPase subunit B, transcript variant X2
V-type proton ATPase subunit B isoform X1
V-type proton ATPase subunit B isoform X2
serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit
thyrotropin-releasing hormone receptor-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
thyrotropin-releasing hormone receptor-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
thyrotropin-releasing hormone receptor-like isoform X2
thyrotropin-releasing hormone receptor-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA threonine (anticodon CGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
ubiquitin-like domain-containing CTD phosphatase 1
uncharacterized LOC125238278, transcript variant X1
uncharacterized protein LOC125238278 isoform X1
uncharacterized LOC125238278, transcript variant X2
uncharacterized protein LOC125238278 isoform X2
DC-STAMP domain-containing protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
rho-related BTB domain-containing protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
H/ACA ribonucleoprotein complex subunit 2-like protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125238469, transcript variant X2
uncharacterized LOC125238469, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125238368, transcript variant X1
uncharacterized LOC125238368, transcript variant X2
uncharacterized protein LOC125238368 isoform X1
uncharacterized protein LOC125238368 isoform X2
uncharacterized LOC125238367, transcript variant X2
uncharacterized LOC125238367, transcript variant X1
uncharacterized LOC125238428, transcript variant X4
uncharacterized LOC125238428, transcript variant X1
uncharacterized LOC125238428, transcript variant X5
uncharacterized LOC125238428, transcript variant X3
uncharacterized LOC125238428, transcript variant X2
uncharacterized protein LOC125238428 isoform X1
uncharacterized protein LOC125238428 isoform X2
uncharacterized protein LOC125238428 isoform X3
hyphancin-3G-like, transcript variant X3
hyphancin-3G-like, transcript variant X2
hyphancin-3G-like, transcript variant X1
neuropeptide F receptor-like, transcript variant X1
neuropeptide F receptor-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
serine protease HTRA2, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized protein LOC125238403 isoform X1
uncharacterized protein LOC125238403 isoform X2
uncharacterized protein LOC125238403 isoform X3
uncharacterized protein LOC125238403 isoform X10
uncharacterized protein LOC125238403 isoform X11
uncharacterized protein LOC125238403 isoform X12
uncharacterized protein LOC125238403 isoform X8
uncharacterized protein LOC125238403 isoform X13
uncharacterized protein LOC125238403 isoform X9
uncharacterized protein LOC125238403 isoform X14
uncharacterized protein LOC125238403 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125238405, transcript variant X2
uncharacterized LOC125238405, transcript variant X1
uncharacterized protein LOC125238405 isoform X1
uncharacterized protein LOC125238405 isoform X2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: dedicator of cytokinesis protein 1
sodium-coupled monocarboxylate transporter 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
octopamine receptor beta-2R-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
octopamine receptor beta-2R-like isoform X2
octopamine receptor beta-2R-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
octopamine receptor beta-2R-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
octopamine receptor beta-2R-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments