Leguminivora glycinivorella isolate SPB_JAAS2020 chromosome 20, LegGlyc_1.1, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Tortricoidea; Tortricidae; Olethreutinae; Grapholitini; Leguminivora.
REFSEQ INFORMATION: The reference sequence is identical to\nCM041140.1.\nAssembly name: LegGlyc_1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the USDA-ARS on 2022/04/22. The\noriginal whole-genome shotgun project has the accession\nJAKXMO000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: USDA-ARS\nAssembly Date :: 08-OCT-2021\nAssembly Method :: NextDeNovo v. 2.5.0\nAssembly Name :: LegGlyc_1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 85.48x\nSequencing Technology :: Oxford Nanopore GridION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Leguminivora glycinivorella\n Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA asparagine (anticodon AUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon.
basement membrane-specific heparan sulfate proteoglycan core protein
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
uncharacterized LOC125237156, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized LOC125237156, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125237232, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC125237232, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized protein LOC125237232 isoform X2
uncharacterized protein LOC125237232 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125236997, transcript variant X3
uncharacterized LOC125236997, transcript variant X2
uncharacterized LOC125236997, transcript variant X1
nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
zinc finger protein 879-like, transcript variant X2
zinc finger protein 879-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
dynamin-like 120 kDa protein, mitochondrial, transcript variant X5
dynamin-like 120 kDa protein, mitochondrial, transcript variant X2
dynamin-like 120 kDa protein, mitochondrial, transcript variant X4
dynamin-like 120 kDa protein, mitochondrial, transcript variant X3
dynamin-like 120 kDa protein, mitochondrial, transcript variant X1
dynamin-like 120 kDa protein, mitochondrial isoform X5
dynamin-like 120 kDa protein, mitochondrial isoform X2
dynamin-like 120 kDa protein, mitochondrial isoform X4
dynamin-like 120 kDa protein, mitochondrial isoform X3
dynamin-like 120 kDa protein, mitochondrial isoform X1
EH domain-binding protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
EH domain-binding protein 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
EH domain-binding protein 1, transcript variant X1
transfer RNA alanine (anticodon GGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
thyroid receptor-interacting protein 11-like, transcript variant X1
thyroid receptor-interacting protein 11-like, transcript variant X2
thyroid receptor-interacting protein 11-like isoform X1
thyroid receptor-interacting protein 11-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
zinc finger protein 808-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
zinc finger protein 808-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
gastrula zinc finger protein XlCGF26.1-like
gastrula zinc finger protein XlCGF46.1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
neural/ectodermal development factor IMP-L2-like, transcript variant X1
neural/ectodermal development factor IMP-L2-like, transcript variant X2
neural/ectodermal development factor IMP-L2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
neural/ectodermal development factor IMP-L2-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
neural/ectodermal development factor IMP-L2-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
neural/ectodermal development factor IMP-L2-like isoform X1
neural/ectodermal development factor IMP-L2-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC125237161, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
uncharacterized LOC125237161, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
proton-coupled amino acid transporter-like protein pathetic
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
irregular chiasm C-roughest protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125237022, transcript variant X3
uncharacterized LOC125237022, transcript variant X2
uncharacterized LOC125237022, transcript variant X1
uncharacterized protein LOC125237022 isoform X2
uncharacterized protein LOC125237022 isoform X1
zinc finger protein 865-like, transcript variant X2
zinc finger protein 865-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized LOC125237186, transcript variant X2
uncharacterized LOC125237186, transcript variant X1
uncharacterized protein LOC125237186 isoform X1
uncharacterized protein LOC125237186 isoform X2
irregular chiasm C-roughest protein-like, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
irregular chiasm C-roughest protein-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
irregular chiasm C-roughest protein-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
irregular chiasm C-roughest protein-like, transcript variant X4
irregular chiasm C-roughest protein-like, transcript variant X1
irregular chiasm C-roughest protein-like, transcript variant X5
irregular chiasm C-roughest protein-like, transcript variant X8
irregular chiasm C-roughest protein-like, transcript variant X6
irregular chiasm C-roughest protein-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
irregular chiasm C-roughest protein-like isoform X5
irregular chiasm C-roughest protein-like isoform X2
irregular chiasm C-roughest protein-like isoform X6
irregular chiasm C-roughest protein-like isoform X7
irregular chiasm C-roughest protein-like isoform X3
irregular chiasm C-roughest protein-like isoform X1
irregular chiasm C-roughest protein-like isoform X8
irregular chiasm C-roughest protein-like isoform X4
transfer RNA serine (anticodon GGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
E3 ubiquitin-protein ligase CBL-B-B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized protein DDB_G0290685-like
uncharacterized LOC125237250, transcript variant X2
uncharacterized LOC125237250, transcript variant X1
uncharacterized LOC125237246, transcript variant X3
uncharacterized LOC125237246, transcript variant X2
uncharacterized LOC125237246, transcript variant X1
uncharacterized protein LOC125237246 isoform X3
uncharacterized protein LOC125237246 isoform X2
uncharacterized protein LOC125237246 isoform X1
uncharacterized LOC125237225, transcript variant X1
uncharacterized LOC125237225, transcript variant X2
uncharacterized LOC125237225, transcript variant X3
uncharacterized protein LOC125237225 isoform X1
uncharacterized protein LOC125237225 isoform X2
uncharacterized protein LOC125237225 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transfer RNA threonine (anticodon CGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
stress protein DDR48-like, transcript variant X1
stress protein DDR48-like, transcript variant X2
uncharacterized protein DDB_G0271670-like isoform X2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
serologically defined colon cancer antigen 8 homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
serologically defined colon cancer antigen 8 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized protein LOC125237234 isoform X2
serologically defined colon cancer antigen 8 homolog isoform X1
serologically defined colon cancer antigen 8 homolog, transcript variant X4
serologically defined colon cancer antigen 8 homolog, transcript variant X3
serologically defined colon cancer antigen 8 homolog, transcript variant X7
serologically defined colon cancer antigen 8 homolog isoform X4
serologically defined colon cancer antigen 8 homolog isoform X3
serologically defined colon cancer antigen 8 homolog, transcript variant X9
serologically defined colon cancer antigen 8 homolog, transcript variant X5
serologically defined colon cancer antigen 8 homolog isoform X7
serologically defined colon cancer antigen 8 homolog isoform X5
serologically defined colon cancer antigen 8 homolog isoform X9
serologically defined colon cancer antigen 8 homolog, transcript variant X10
serologically defined colon cancer antigen 8 homolog, transcript variant X8
serologically defined colon cancer antigen 8 homolog isoform X10
serologically defined colon cancer antigen 8 homolog isoform X8
serologically defined colon cancer antigen 8 homolog, transcript variant X6
serologically defined colon cancer antigen 8 homolog isoform X6
uncharacterized LOC125237242, transcript variant X1
uncharacterized LOC125237242, transcript variant X2
uncharacterized LOC125237242, transcript variant X3
uncharacterized protein LOC125237242 isoform X1
uncharacterized protein LOC125237242 isoform X2
uncharacterized protein LOC125237242 isoform X3
uncharacterized LOC125237244, transcript variant X2
uncharacterized LOC125237244, transcript variant X1
mitochondrial import receptor subunit TOM20 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 8-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
mitochondrial import inner membrane translocase subunit Tim10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
damage-control phosphatase ARMT1-like, transcript variant X1
damage-control phosphatase ARMT1-like, transcript variant X2
damage-control phosphatase ARMT1-like isoform X1
damage-control phosphatase ARMT1-like isoform X2
transfer RNA lysine (anticodon UUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
zinc finger and BTB domain-containing protein 17-like
zinc finger protein 14-like, transcript variant X2
zinc finger protein 14-like, transcript variant X1
adrenodoxin-like protein 1, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
heterogeneous nuclear ribonucleoprotein L, transcript variant X2
heterogeneous nuclear ribonucleoprotein L, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
heterogeneous nuclear ribonucleoprotein L, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
heterogeneous nuclear ribonucleoprotein L isoform X2
heterogeneous nuclear ribonucleoprotein L isoform X1
heterogeneous nuclear ribonucleoprotein L isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
F-box only protein 28, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
F-box only protein 28, transcript variant X1
F-box only protein 28, transcript variant X4
F-box only protein 28, transcript variant X2
uncharacterized LOC125237110, transcript variant X2
uncharacterized LOC125237110, transcript variant X1
uncharacterized protein LOC125237110 isoform X2
uncharacterized protein LOC125237110 isoform X1
uncharacterized LOC125237109, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized LOC125237109, transcript variant X2
uncharacterized LOC125237183, transcript variant X2
uncharacterized LOC125237183, transcript variant X1
uncharacterized protein LOC125237183 isoform X1
uncharacterized protein LOC125237183 isoform X2
transfer RNA proline (anticodon AGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC125237217, transcript variant X3
uncharacterized LOC125237217, transcript variant X2
uncharacterized LOC125237217, transcript variant X4
uncharacterized LOC125237217, transcript variant X1
uncharacterized protein LOC125237217 isoform X1
uncharacterized protein LOC125237217 isoform X2
uncharacterized LOC125237090, transcript variant X2
uncharacterized LOC125237090, transcript variant X1
transfer RNA serine (anticodon GCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC125237006, transcript variant X1
uncharacterized LOC125237006, transcript variant X2
uncharacterized LOC125237006, transcript variant X3
uncharacterized LOC125237004, transcript variant X3
uncharacterized LOC125237004, transcript variant X2
uncharacterized LOC125237004, transcript variant X1
uncharacterized protein LOC125237004 isoform X2
uncharacterized protein LOC125237004 isoform X1
mediator of RNA polymerase II transcription subunit 15-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
prostamide/prostaglandin F synthase-like
thioredoxin domain-containing protein 5 homolog, transcript variant X1
thioredoxin domain-containing protein 5 homolog, transcript variant X2
thioredoxin domain-containing protein 5 homolog isoform X1
uncharacterized protein LOC125237092 isoform X2
serine/threonine-protein kinase Genghis Khan, transcript variant X9
serine/threonine-protein kinase Genghis Khan
serine/threonine-protein kinase Genghis Khan, transcript variant X8
serine/threonine-protein kinase Genghis Khan, transcript variant X7
serine/threonine-protein kinase Genghis Khan, transcript variant X6
serine/threonine-protein kinase Genghis Khan, transcript variant X5
serine/threonine-protein kinase Genghis Khan, transcript variant X2
serine/threonine-protein kinase Genghis Khan, transcript variant X4
serine/threonine-protein kinase Genghis Khan, transcript variant X3
serine/threonine-protein kinase Genghis Khan, transcript variant X1
puff-specific protein Bx42, transcript variant X1
puff-specific protein Bx42, transcript variant X2
puff-specific protein Bx42, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
thioredoxin-related transmembrane protein 1-like, transcript variant X2
thioredoxin-related transmembrane protein 1-like isoform X2
thioredoxin-related transmembrane protein 1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
thioredoxin-related transmembrane protein 1-like isoform X1
lysophosphatidylserine lipase ABHD12-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
lysophosphatidylserine lipase ABHD12-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
lysophosphatidylserine lipase ABHD12-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
lysophosphatidylserine lipase ABHD12-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
lysophosphatidylserine lipase ABHD12-like isoform X1
lysophosphatidylserine lipase ABHD12-like isoform X2
lysophosphatidylserine lipase ABHD12-like isoform X4
lysophosphatidylserine lipase ABHD12-like isoform X3
uncharacterized LOC125237194, transcript variant X2
uncharacterized LOC125237194, transcript variant X1
uncharacterized protein LOC125237194 isoform X2
uncharacterized protein LOC125237194 isoform X1
pleckstrin homology-like domain family B member 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
pleckstrin homology-like domain family B member 2
uncharacterized LOC125237159, transcript variant X2
uncharacterized LOC125237159, transcript variant X1
uncharacterized protein LOC125237159 isoform X2
uncharacterized protein LOC125237159 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 83% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
thioredoxin domain-containing protein 2-like
phage-like element PBSX protein XkdO, transcript variant X1
phage-like element PBSX protein XkdO, transcript variant X2
phage-like element PBSX protein XkdO isoform X1
phage-like element PBSX protein XkdO isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
sprouty-related, EVH1 domain-containing protein 2, transcript variant X2
sprouty-related, EVH1 domain-containing protein 2, transcript variant X1
sprouty-related, EVH1 domain-containing protein 2, transcript variant X3
sprouty-related, EVH1 domain-containing protein 2 isoform X2
sprouty-related, EVH1 domain-containing protein 1 isoform X1
sprouty-related, EVH1 domain-containing protein 2 isoform X3
delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
proton-coupled amino acid transporter-like protein pathetic, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
proton-coupled amino acid transporter-like protein pathetic isoform X1
proton-coupled amino acid transporter-like protein pathetic, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
proton-coupled amino acid transporter-like protein pathetic isoform X2
GTP cyclohydrolase 1, transcript variant X2
GTP cyclohydrolase 1, transcript variant X4
GTP cyclohydrolase 1, transcript variant X1
GTP cyclohydrolase 1, transcript variant X3
GTP cyclohydrolase 1, transcript variant X5
deubiquitinase DESI2, transcript variant X2
deubiquitinase DESI2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
deubiquitinase DESI2, transcript variant X4
deubiquitinase DESI2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
coatomer subunit delta, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
coatomer subunit delta, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
heterogeneous nuclear ribonucleoprotein U-like protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125237100, transcript variant X2
uncharacterized LOC125237100, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
dynein regulatory complex protein 8, transcript variant X2
dynein regulatory complex protein 8, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
dynein regulatory complex protein 8 isoform X2
dynein regulatory complex protein 8 isoform X1
uncharacterized LOC125237134, transcript variant X2
uncharacterized LOC125237134, transcript variant X1
uncharacterized LOC125237175, transcript variant X2
uncharacterized LOC125237175, transcript variant X1
uncharacterized protein LOC125237175 isoform X1
uncharacterized protein LOC125237175 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
60S ribosome subunit biogenesis protein NIP7 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
uncharacterized LOC125237196, transcript variant X3
uncharacterized LOC125237196, transcript variant X1
uncharacterized LOC125237196, transcript variant X2
uncharacterized protein LOC125237196 isoform X3
uncharacterized protein LOC125237196 isoform X1
uncharacterized protein LOC125237196 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57% coverage of the annotated genomic feature by RNAseq alignments
leucine-rich repeat-containing protein 1, transcript variant X1
leucine-rich repeat-containing protein 1, transcript variant X2
leucine-rich repeat-containing protein 1 isoform X2
leucine-rich repeat protein SHOC-2 isoform X1
cofilin/actin-depolymerizing factor homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments
macro domain-containing protein RSc0334-like
neutral alpha-glucosidase AB, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
neutral alpha-glucosidase AB, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
poly(A) polymerase type 3, transcript variant X2
poly(A) polymerase type 3, transcript variant X1
MAP/microtubule affinity-regulating kinase 3-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
MAP/microtubule affinity-regulating kinase 3-like, transcript variant X12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
serine/threonine-protein kinase MARK2-like isoform X10
MAP/microtubule affinity-regulating kinase 3-like, transcript variant X10
serine/threonine-protein kinase MARK2-like isoform X8
MAP/microtubule affinity-regulating kinase 3-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
MAP/microtubule affinity-regulating kinase 3-like, transcript variant X1
MAP/microtubule affinity-regulating kinase 3-like, transcript variant X6
MAP/microtubule affinity-regulating kinase 3-like, transcript variant X8
MAP/microtubule affinity-regulating kinase 3-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
MAP/microtubule affinity-regulating kinase 3-like, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
MAP/microtubule affinity-regulating kinase 3-like, transcript variant X4
MAP/microtubule affinity-regulating kinase 3-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
MAP/microtubule affinity-regulating kinase 3-like, transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
MAP/microtubule affinity-regulating kinase 3-like isoform X1
serine/threonine-protein kinase MARK2-like isoform X4
serine/threonine-protein kinase MARK2-like isoform X6
MAP/microtubule affinity-regulating kinase 3-like isoform X3
MAP/microtubule affinity-regulating kinase 3-like isoform X7
MAP/microtubule affinity-regulating kinase 3-like isoform X2
serine/threonine-protein kinase MARK2-like isoform X5
serine/threonine-protein kinase MARK2-like isoform X9
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC125237189
transfer RNA serine (anticodon CGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
fibroblast growth factor receptor-like 1, transcript variant X2
fibroblast growth factor receptor-like 1, transcript variant X1
fibroblast growth factor receptor-like 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
regulator of chromosome condensation-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: regulator of chromosome condensation-like
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00004
methylosome subunit pICln-like, transcript variant X1
methylosome subunit pICln-like, transcript variant X2
methylosome subunit pICln-like isoform X1
methylosome subunit pICln-like isoform X2
uncharacterized LOC125237202, transcript variant X1
uncharacterized protein LOC125237202 isoform X1
uncharacterized LOC125237202, transcript variant X2
uncharacterized protein LOC125237202 isoform X2
rRNA 2'-O-methyltransferase fibrillarin-like
LOW QUALITY PROTEIN: rRNA 2'-O-methyltransferase fibrillarin-like
LOW QUALITY PROTEIN: WD repeat-containing protein 43
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: ALK tyrosine kinase receptor
transmembrane channel-like protein 7, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transmembrane channel-like protein 7, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transmembrane channel-like protein 7 isoform X1
transmembrane channel-like protein 7, transcript variant X3
transmembrane channel-like protein 7 isoform X2
transmembrane channel-like protein 7, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transmembrane channel-like protein 7 isoform X3
actin-related protein 2, transcript variant X2
actin-related protein 2, transcript variant X1
probable serine/threonine-protein kinase HSL1
CCAAT/enhancer-binding protein zeta, transcript variant X2
CCAAT/enhancer-binding protein zeta, transcript variant X1
CCAAT/enhancer-binding protein zeta isoform X2
CCAAT/enhancer-binding protein zeta isoform X1
mitogen-activated protein kinase kinase kinase kinase 5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: uncharacterized protein LOC125236940
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: uncharacterized protein LOC125236943
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86% coverage of the annotated genomic feature by RNAseq alignments
homeobox protein 2-like, transcript variant X4
homeobox protein 2-like, transcript variant X1
homeobox protein 2-like, transcript variant X2
homeobox protein 2-like, transcript variant X3
homeobox protein 2-like, transcript variant X5
probable serine/threonine-protein kinase clkA isoform X2
uncharacterized LOC125237167, transcript variant X2
uncharacterized LOC125237167, transcript variant X1
uncharacterized protein LOC125237167 isoform X2
uncharacterized protein LOC125237167 isoform X1
uncharacterized LOC125237167, transcript variant X3
uncharacterized protein LOC125237167 isoform X3
MFS-type transporter clz9-like, transcript variant X1
MFS-type transporter clz9-like, transcript variant X2
MFS-type transporter clz9-like isoform X1
MFS-type transporter clz9-like isoform X2
uncharacterized LOC125237106, transcript variant X2
uncharacterized LOC125237106, transcript variant X1
uncharacterized protein LOC125237106 isoform X2
uncharacterized protein LOC125237106 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
bromo and FHA domain-containing protein DDB_G0267958-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments
RNA polymerase-associated protein Rtf1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: RNA polymerase-associated protein Rtf1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125237081, transcript variant X1
uncharacterized LOC125237081, transcript variant X2
uncharacterized protein LOC125237081 isoform X1
uncharacterized protein LOC125237081 isoform X2
transfer RNA threonine (anticodon GGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC125237199, transcript variant X1
uncharacterized LOC125237199, transcript variant X2
uncharacterized protein LOC125237199 isoform X1
uncharacterized protein LOC125237199 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
putative uncharacterized protein DDB_G0282133
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
putative uncharacterized protein DDB_G0282133, transcript variant X2
putative uncharacterized protein DDB_G0282133, transcript variant X1
uncharacterized protein LOC125237253 isoform X2
putative uncharacterized protein DDB_G0282133 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments
probable ATP-dependent RNA helicase DHX35
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
uncharacterized LOC125237230, transcript variant X1
uncharacterized LOC125237230, transcript variant X2
uncharacterized protein LOC125237230 isoform X1
uncharacterized protein LOC125237230 isoform X2
uncharacterized LOC125237219, transcript variant X2
uncharacterized LOC125237219, transcript variant X1
uncharacterized protein LOC125237219 isoform X2
uncharacterized protein LOC125237219 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins