Leguminivora glycinivorella isolate SPB_JAAS2020 chromosome 18, LegGlyc_1.1, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Tortricoidea; Tortricidae; Olethreutinae; Grapholitini; Leguminivora.
REFSEQ INFORMATION: The reference sequence is identical to\nCM041138.1.\nAssembly name: LegGlyc_1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the USDA-ARS on 2022/04/22. The\noriginal whole-genome shotgun project has the accession\nJAKXMO000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: USDA-ARS\nAssembly Date :: 08-OCT-2021\nAssembly Method :: NextDeNovo v. 2.5.0\nAssembly Name :: LegGlyc_1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 85.48x\nSequencing Technology :: Oxford Nanopore GridION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Leguminivora glycinivorella\n Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
probable cytochrome P450 301a1, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
GDP-D-glucose phosphorylase 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
GDP-D-glucose phosphorylase 1, transcript variant X3
GDP-D-glucose phosphorylase 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
WD repeat domain phosphoinositide-interacting protein 4, transcript variant X2
WD repeat domain phosphoinositide-interacting protein 4, transcript variant X1
WD repeat domain phosphoinositide-interacting protein 4 isoform X1
WD repeat domain phosphoinositide-interacting protein 4 isoform X2
telomere length and silencing protein 1 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
AN1-type zinc finger protein 2A-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
AN1-type zinc finger protein 2A-like isoform X1
AN1-type zinc finger protein 2A-like, transcript variant X2
AN1-type zinc finger protein 2A-like isoform X2
probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like isoform X1
pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like, transcript variant X2
pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like isoform X2
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00007
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
uncharacterized LOC125235719, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC125235719, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC125235719, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC125236088
protein kinase C and casein kinase substrate in neurons protein 1, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
protein kinase C and casein kinase substrate in neurons protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
protein kinase C and casein kinase substrate in neurons protein 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
protein kinase C and casein kinase substrate in neurons protein 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
protein kinase C and casein kinase substrate in neurons protein 1 isoform X1
protein kinase C and casein kinase substrate in neurons protein 1 isoform X2
protein kinase C and casein kinase substrate in neurons protein 1 isoform X3
protein kinase C and casein kinase substrate in neurons protein 1 isoform X4
uncharacterized LOC125236030, transcript variant X1
uncharacterized LOC125236030, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
acyl-CoA (8-3)-desaturase-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
acyl-CoA (8-3)-desaturase-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
acyl-CoA (8-3)-desaturase-like isoform X2
acyl-CoA (8-3)-desaturase-like isoform X1
prothoracicostatic peptide-like, transcript variant X1
prothoracicostatic peptide-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
prothoracicostatic peptides-like isoform X1
prothoracicostatic peptide-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
tRNA:m(4)X modification enzyme TRM13 homolog
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: tRNA:m(4)X modification enzyme TRM13 homolog
ADP-ribosylation factor GTPase-activating protein 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
ADP-ribosylation factor GTPase-activating protein 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
ADP-ribosylation factor GTPase-activating protein 2 isoform X2
ADP-ribosylation factor GTPase-activating protein 3 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
glucosamine-6-phosphate isomerase, transcript variant X1
glucosamine-6-phosphate isomerase, transcript variant X2
glucosamine-6-phosphate isomerase isoform X2
glucosamine-6-phosphate isomerase isoform X1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
LOW QUALITY PROTEIN: charged multivesicular body protein 2a
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 347 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
LOW QUALITY PROTEIN: rho GTPase-activating protein Graf
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
apoptosis-inducing factor 1, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
hemicentin-1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
hemicentin-1-like, transcript variant X1
hemicentin-2-like, transcript variant X1
hemicentin-2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Hermansky-Pudlak syndrome 5 protein homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
COORDINATES: nucleotide motif:Rfam:12.0:RF00026
zinc finger protein ZFP2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
zinc finger protein ZFP2-like, transcript variant X2
zinc finger and SCAN domain-containing protein 12-like isoform X1
zinc finger protein ZFP2-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
ankyrin repeat and SAM domain-containing protein 1A-like, transcript variant X1
ankyrin repeat and SAM domain-containing protein 1A-like, transcript variant X2
ankyrin repeat and SAM domain-containing protein 1A-like, transcript variant X3
ankyrin repeat and SAM domain-containing protein 1A-like isoform X1
ankyrin repeat and SAM domain-containing protein 1A-like isoform X2
ankyrin repeat and SAM domain-containing protein 1A-like isoform X3
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transmembrane 7 superfamily member 3-like, transcript variant X1
transmembrane 7 superfamily member 3-like, transcript variant X2
transmembrane 7 superfamily member 3-like isoform X1
transmembrane 7 superfamily member 3-like isoform X2
paired box protein Pax-6, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
paired box protein Pax-6, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
paired box protein Pax-6, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
paired box protein Pax-6, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
paired box protein Pax-6, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
paired box protein Pax-6, transcript variant X1
torso-like protein, transcript variant X1
torso-like protein, transcript variant X2
uncharacterized LOC125235869, transcript variant X2
uncharacterized LOC125235869, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized protein LOC125235869 isoform X2
uncharacterized protein LOC125235869 isoform X1
transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
structural maintenance of chromosomes protein 1A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
N-alpha-acetyltransferase 15, NatA auxiliary subunit
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
nuclear transcription factor Y subunit alpha, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
nuclear transcription factor Y subunit alpha, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
nuclear transcription factor Y subunit alpha, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
nuclear transcription factor Y subunit alpha isoform X1
nuclear transcription factor Y subunit alpha isoform X2
uncharacterized LOC125235841, transcript variant X2
uncharacterized LOC125235841, transcript variant X1
uncharacterized protein LOC125235841 isoform X2
uncharacterized protein LOC125235841 isoform X1
homeodomain-interacting protein kinase 2, transcript variant X1
homeodomain-interacting protein kinase 2, transcript variant X3
homeodomain-interacting protein kinase 2, transcript variant X4
homeodomain-interacting protein kinase 2, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
homeodomain-interacting protein kinase 2, transcript variant X2
homeodomain-interacting protein kinase 2 isoform X1
homeodomain-interacting protein kinase 2 isoform X2
homeodomain-interacting protein kinase 2 isoform X3
uncharacterized LOC125235831, transcript variant X2
uncharacterized LOC125235831, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: proteasome subunit alpha type-1-like
FMRFamide-related peptides-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
FMRFamide-related peptides-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
FMRFamide-related peptides-like isoform X1
FMRFamide-related peptides-like isoform X2
transient receptor potential protein-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: transient receptor potential protein-like
transient-receptor-potential-like protein
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: transient-receptor-potential-like protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
probable protein phosphatase 2C T23F11.1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
galactose mutarotase-like, transcript variant X1
galactose mutarotase-like, transcript variant X2
galactose mutarotase-like, transcript variant X3
galactose mutarotase-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
ecto-NOX disulfide-thiol exchanger 1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR1
transfer RNA tryptophan (anticodon CCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: myotubularin-related protein 13
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
zinc finger BED domain-containing protein 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125235976, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
uncharacterized LOC125235976, transcript variant X1
uncharacterized protein LOC125235976 isoform X2
uncharacterized protein LOC125235976 isoform X1
uncharacterized LOC125235898, transcript variant X3
uncharacterized LOC125235898, transcript variant X1
uncharacterized LOC125235898, transcript variant X2
uncharacterized protein LOC125235898 isoform X2
uncharacterized protein LOC125235898 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
U8-agatoxin-Ao1a-like, transcript variant X4
U8-agatoxin-Ao1a-like, transcript variant X6
U8-agatoxin-Ao1a-like, transcript variant X5
U8-agatoxin-Ao1a-like, transcript variant X2
U8-agatoxin-Ao1a-like, transcript variant X3
U8-agatoxin-Ao1a-like, transcript variant X1
uncharacterized protein LOC125235973 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125236186, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized protein LOC125236186 isoform X2
uncharacterized LOC125236186, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized protein LOC125236186 isoform X1
protein tumorous imaginal discs, mitochondrial-like, transcript variant X2
protein tumorous imaginal discs, mitochondrial-like isoform X2
protein tumorous imaginal discs, mitochondrial-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
protein tumorous imaginal discs, mitochondrial-like isoform X3
protein tumorous imaginal discs, mitochondrial-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
protein tumorous imaginal discs, mitochondrial-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125235958, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
uncharacterized LOC125235958, transcript variant X1
AF4/FMR2 family member 3, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
AF4/FMR2 family member 3, transcript variant X5
AF4/FMR2 family member 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
AF4/FMR2 family member 3, transcript variant X3
AF4/FMR2 family member 3, transcript variant X2
uncharacterized protein K02A2.6-like, transcript variant X1
uncharacterized protein K02A2.6-like, transcript variant X2
uncharacterized protein LOC125235990 isoform X2
uncharacterized protein K02A2.6-like isoform X1
AT-rich interactive domain-containing protein 2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 2
transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
endochitinase-like, transcript variant X1
endochitinase-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
chitotriosidase-1-like, transcript variant X1
chitotriosidase-1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
acidic mammalian chitinase-like, transcript variant X1
acidic mammalian chitinase-like, transcript variant X2
acidic mammalian chitinase-like isoform X2
acidic mammalian chitinase-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
guanylate cyclase soluble subunit beta-1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 4 bases at 4 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: guanylate cyclase soluble subunit beta-1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
glutaredoxin domain-containing cysteine-rich protein CG31559-like
transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
synaptotagmin-6-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
synaptotagmin-6-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
cleavage and polyadenylation specificity factor subunit 6, transcript variant X2
cleavage and polyadenylation specificity factor subunit 6, transcript variant X5
cleavage and polyadenylation specificity factor subunit 6, transcript variant X4
cleavage and polyadenylation specificity factor subunit 6, transcript variant X3
cleavage and polyadenylation specificity factor subunit 6, transcript variant X1
cleavage and polyadenylation specificity factor subunit 6 isoform X2
cleavage and polyadenylation specificity factor subunit 6 isoform X5
cleavage and polyadenylation specificity factor subunit 6 isoform X4
cleavage and polyadenylation specificity factor subunit 6 isoform X3
cleavage and polyadenylation specificity factor subunit 6 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
DNA-directed RNA polymerase III subunit RPC3
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC125235843
probable serine/threonine-protein kinase fhkE, transcript variant X3
probable serine/threonine-protein kinase fhkE, transcript variant X2
probable serine/threonine-protein kinase fhkE, transcript variant X1
probable serine/threonine-protein kinase fhkE isoform X2
probable serine/threonine-protein kinase fhkE isoform X1
probable serine/threonine-protein kinase fhkE isoform X3
intraflagellar transport protein 57 homolog
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
LOW QUALITY PROTEIN: intraflagellar transport protein 57 homolog
xylosyl- and glucuronyltransferase LARGE2s-like
xylosyl- and glucuronyltransferase LARGE1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin repeat domain-containing protein 12-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125235963, transcript variant X4
uncharacterized LOC125235963, transcript variant X3
uncharacterized LOC125235963, transcript variant X2
uncharacterized LOC125235963, transcript variant X1
uncharacterized protein LOC125235963 isoform X4
uncharacterized protein LOC125235963 isoform X3
uncharacterized protein LOC125235963 isoform X2
uncharacterized protein LOC125235963 isoform X1
uncharacterized LOC125235962, transcript variant X3
uncharacterized LOC125235962, transcript variant X2
uncharacterized LOC125235962, transcript variant X1
uncharacterized protein LOC125235962 isoform X3
uncharacterized protein LOC125235962 isoform X2
uncharacterized protein LOC125235962 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
histone deacetylase 11, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
histone deacetylase 11, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transfer RNA arginine (anticodon UCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC125236155, transcript variant X1
uncharacterized LOC125236155, transcript variant X2
uncharacterized protein LOC125236155 isoform X1
uncharacterized protein LOC125236155 isoform X2
ankyrin repeat and LEM domain-containing protein 2
malignant T-cell-amplified sequence 1 homolog, transcript variant X1
malignant T-cell-amplified sequence 1 homolog isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
malignant T-cell-amplified sequence 1 homolog, transcript variant X2
malignant T-cell-amplified sequence 1 homolog isoform X2
electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125236169, transcript variant X1
uncharacterized protein LOC125236169 isoform X1
uncharacterized LOC125236169, transcript variant X2
uncharacterized protein LOC125236169 isoform X2
transfer RNA glutamine (anticodon CUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC125236182, transcript variant X2
uncharacterized LOC125236182, transcript variant X1
uncharacterized LOC125236178, transcript variant X2
uncharacterized LOC125236178, transcript variant X1
uncharacterized protein LOC125236178 isoform X2
uncharacterized protein LOC125236178 isoform X1
uncharacterized LOC125236176, transcript variant X1
uncharacterized LOC125236176, transcript variant X2
uncharacterized LOC125236176, transcript variant X4
uncharacterized LOC125236176, transcript variant X3
brain tumor protein, transcript variant X13
brain tumor protein, transcript variant X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
brain tumor protein, transcript variant X9
brain tumor protein, transcript variant X6
transfer RNA threonine (anticodon CGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
brain tumor protein, transcript variant X12
brain tumor protein, transcript variant X11
brain tumor protein, transcript variant X1
brain tumor protein, transcript variant X7
uncharacterized LOC125236159, transcript variant X1
uncharacterized LOC125236159, transcript variant X3
uncharacterized LOC125236159, transcript variant X2
uncharacterized protein LOC125236159 isoform X2
uncharacterized protein LOC125236159 isoform X3
uncharacterized protein LOC125236159 isoform X1
brain tumor protein, transcript variant X2
brain tumor protein, transcript variant X5
brain tumor protein, transcript variant X4
brain tumor protein, transcript variant X3
brain tumor protein, transcript variant X8
uncharacterized LOC125235946, transcript variant X1
uncharacterized LOC125235946, transcript variant X2
uncharacterized protein LOC125235946 isoform X1
uncharacterized protein LOC125235946 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 87% coverage of the annotated genomic feature by RNAseq alignments
protein ALP1-like, transcript variant X2
protein ALP1-like, transcript variant X1
uncharacterized LOC125236075, transcript variant X4
uncharacterized LOC125236075, transcript variant X2
uncharacterized LOC125236075, transcript variant X1
uncharacterized LOC125236075, transcript variant X3
uncharacterized protein LOC125236075 isoform X3
uncharacterized protein LOC125236075 isoform X1
uncharacterized protein LOC125236075 isoform X2
uncharacterized LOC125236078, transcript variant X2
uncharacterized LOC125236078, transcript variant X1
uncharacterized LOC125236077, transcript variant X2
uncharacterized protein LOC125236077 isoform X2
uncharacterized LOC125236077, transcript variant X1
uncharacterized protein LOC125236077 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125236074, transcript variant X3
uncharacterized protein LOC125236074 isoform X2
uncharacterized LOC125236074, transcript variant X1
uncharacterized LOC125236074, transcript variant X2
uncharacterized protein LOC125236074 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65% coverage of the annotated genomic feature by RNAseq alignments
protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like, transcript variant X2
protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like isoform X1
protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like isoform X2
uncharacterized LOC125235948, transcript variant X1
uncharacterized LOC125235948, transcript variant X2
uncharacterized protein LOC125235948 isoform X1
uncharacterized protein LOC125235948 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 69% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125236017, transcript variant X1
uncharacterized LOC125236017, transcript variant X3
uncharacterized LOC125236017, transcript variant X2
uncharacterized protein LOC125236017 isoform X1
uncharacterized protein LOC125236017 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized protein LOC125235951 isoform X2
uncharacterized LOC125236001, transcript variant X1
uncharacterized LOC125236001, transcript variant X2
uncharacterized LOC125236001, transcript variant X3
uncharacterized LOC125236001, transcript variant X4
uncharacterized protein LOC125236001 isoform X1
uncharacterized protein LOC125236001 isoform X2
uncharacterized protein LOC125236001 isoform X3
uncharacterized LOC125235970, transcript variant X2
uncharacterized LOC125235970, transcript variant X1
zinc finger MYM-type protein 1-like, transcript variant X1
zinc finger MYM-type protein 1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
LOW QUALITY PROTEIN: trans-1,2-dihydrobenzene-1,2-diol dehydrogenase-like
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
ubiquitin-fold modifier 1, transcript variant X2
ubiquitin-fold modifier 1, transcript variant X1
uncharacterized protein LOC125235856 isoform X1
uncharacterized LOC125235857, transcript variant X1
uncharacterized LOC125235857, transcript variant X4
uncharacterized LOC125235857, transcript variant X3
uncharacterized LOC125235857, transcript variant X2
uncharacterized protein LOC125235857 isoform X1
uncharacterized protein LOC125235857 isoform X4
uncharacterized protein LOC125235857 isoform X3
uncharacterized protein LOC125235857 isoform X2
phospholipid-transporting ATPase ABCA1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: phospholipid-transporting ATPase ABCA1-like
retinal-specific phospholipid-transporting ATPase ABCA4-like, transcript variant X1
retinal-specific phospholipid-transporting ATPase ABCA4-like, transcript variant X2
retinal-specific phospholipid-transporting ATPase ABCA4-like
TNF receptor-associated factor 1, transcript variant X1
TNF receptor-associated factor 1, transcript variant X2
TNF receptor-associated factor 3 isoform X1
TNF receptor-associated factor 1 isoform X2
transfer RNA alanine (anticodon GGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: neuropeptides capa receptor
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments
keratin-associated protein 9-3-like, transcript variant X1
keratin-associated protein 9-3-like, transcript variant X2
keratin-associated protein 9-3-like isoform X2
uncharacterized protein LOC125236046 isoform X1
uncharacterized LOC125235883, transcript variant X2
uncharacterized LOC125235883, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
activity-regulated cytoskeleton associated protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC125235747, transcript variant X2
uncharacterized LOC125235747, transcript variant X1
uncharacterized protein LOC125235747 isoform X2
uncharacterized protein LOC125235747 isoform X1
uncharacterized LOC125235746, transcript variant X2
uncharacterized protein LOC125235746 isoform X2
uncharacterized LOC125235746, transcript variant X1
uncharacterized protein LOC125235746 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125236127, transcript variant X2
uncharacterized LOC125236127, transcript variant X1
transfer RNA threonine (anticodon GGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
carboxypeptidase B-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
carboxypeptidase B-like, transcript variant X1
uncharacterized LOC125235707, transcript variant X1
uncharacterized LOC125235707, transcript variant X2
transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SH3RF1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC125235790
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: uncharacterized protein LOC125235792
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: centrosomal protein of 97 kDa
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
AP-1 complex subunit mu-1, transcript variant X1
AP-1 complex subunit mu-1, transcript variant X3
AP-1 complex subunit mu-1, transcript variant X2
DNA polymerase subunit gamma-1, mitochondrial
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1, mitochondrial
transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61% coverage of the annotated genomic feature by RNAseq alignments
leucine-rich repeat-containing protein 24-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 24-like
uncharacterized oxidoreductase TM_0325-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
leucine-rich repeat-containing protein 24-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
leucine-rich repeat-containing protein 24-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
leucine-rich repeat-containing protein 24-like, transcript variant X3
transfer RNA aspartic acid (anticodon AUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
uncharacterized LOC125236034, transcript variant X1
uncharacterized LOC125236034, transcript variant X2
protein Fe65 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
protein Fe65 homolog, transcript variant X2
protein Fe65 homolog, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
protein Fe65 homolog, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
protein Fe65 homolog, transcript variant X5
uncharacterized LOC125235742, transcript variant X1
uncharacterized LOC125235742, transcript variant X2
uncharacterized LOC125235742, transcript variant X3
uncharacterized LOC125235742, transcript variant X4
uncharacterized protein LOC125235742 isoform X1
uncharacterized protein LOC125235742 isoform X2
uncharacterized protein LOC125235742 isoform X3
endoplasmic reticulum-Golgi intermediate compartment protein 2-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: endoplasmic reticulum-Golgi intermediate compartment protein 2-like
ragulator complex protein LAMTOR1, transcript variant X1
ragulator complex protein LAMTOR1 isoform X1
ragulator complex protein LAMTOR1, transcript variant X2
ragulator complex protein LAMTOR1 isoform X2
uncharacterized LOC125235941, transcript variant X1
uncharacterized protein LOC125235941 isoform X1
uncharacterized LOC125235941, transcript variant X2
uncharacterized protein LOC125235941 isoform X2
uncharacterized LOC125235727, transcript variant X2
uncharacterized LOC125235727, transcript variant X1
uncharacterized protein LOC125235727 isoform X2
uncharacterized protein LOC125235727 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
COORDINATES: nucleotide motif:Rfam:12.0:RF00020
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: putative oxidoreductase GLYR1 homolog
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
LOW QUALITY PROTEIN: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
pre-mRNA cleavage complex 2 protein Pcf11
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 4 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: pre-mRNA cleavage complex 2 protein Pcf11
probable asparagine--tRNA ligase, mitochondrial
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
LOW QUALITY PROTEIN: probable asparagine--tRNA ligase, mitochondrial
LOW QUALITY PROTEIN: estradiol 17-beta-dehydrogenase 8-like
facilitated trehalose transporter Tret1-2 homolog
LOW QUALITY PROTEIN: facilitated trehalose transporter Tret1-2 homolog
LOW QUALITY PROTEIN: protein mab-21-like
transfer RNA alanine (anticodon AGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC125235833, transcript variant X4
uncharacterized LOC125235833, transcript variant X5
uncharacterized protein LOC125235833 isoform X4
uncharacterized LOC125235833, transcript variant X3
uncharacterized protein LOC125235833 isoform X3
uncharacterized LOC125235833, transcript variant X2
uncharacterized LOC125235833, transcript variant X1
uncharacterized LOC125235833, transcript variant X6
uncharacterized protein LOC125235833 isoform X2
uncharacterized protein LOC125235833 isoform X1
uncharacterized protein LOC125235833 isoform X5
neurobeachin-like, transcript variant X1
neurobeachin-like, transcript variant X2
uncharacterized LOC125235830, transcript variant X2
uncharacterized LOC125235830, transcript variant X3
uncharacterized LOC125235830, transcript variant X1
uncharacterized protein LOC125235830 isoform X1
uncharacterized protein LOC125235830 isoform X2
uncharacterized protein LOC125235830 isoform X3
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons
LOW QUALITY PROTEIN: GAS2-like protein 3
eukaryotic translation initiation factor 2D
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 65% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: kinesin-like protein Klp68D
vacuolar protein sorting-associated protein 26C
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
lutropin-choriogonadotropic hormone receptor
LOW QUALITY PROTEIN: lutropin-choriogonadotropic hormone receptor
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89% coverage of the annotated genomic feature by RNAseq alignments