Halobaculum magnesiiphilum strain NBRC 109044 plasmid unnamed2, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Haloferacales; Haloferacaceae; Halobaculum.
Halobaculum rubrum sp. nov. isolated from an inland salt lak
Submitted (24-AUG-2021) School of Food and Biological Engineering, Jiangsu University, No. 301 Xuefu Road, Jingkou District, Zhenjiang, Jiangsu 212013, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP081960.1.\nSource bacteria available from CGMCC.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 4\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 629.64x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/30/2023 11:22:24\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,793\nCDSs (total) :: 3,732\nGenes (coding) :: 3,663\nCDSs (with protein) :: 3,663\nGenes (RNA) :: 61\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 53\nncRNAs :: 2\nPseudo Genes (total) :: 69\nCDSs (without protein) :: 69\nPseudo Genes (ambiguous residues) :: 0 of 69\nPseudo Genes (frameshifted) :: 22 of 69\nPseudo Genes (incomplete) :: 51 of 69\nPseudo Genes (internal stop) :: 11 of 69\nPseudo Genes (multiple problems) :: 11 of 69\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Halobaculum magnesiiphilum
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_008849718.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014566.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:NF025168.2
COORDINATES: protein motif:HMM:NF027245.2
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019644560.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008846897.1
COORDINATES: protein motif:HMM:NF024091.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008006755.1
COORDINATES: similar to AA sequence:RefSeq:WP_008012745.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014052486.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006884331.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008413670.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055684.1
COORDINATES: similar to AA sequence:RefSeq:WP_008423334.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061567.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308542.1
COORDINATES: similar to AA sequence:RefSeq:WP_006649281.1
COORDINATES: similar to AA sequence:RefSeq:WP_006183170.1
COORDINATES: similar to AA sequence:RefSeq:WP_014051299.1
GO:0004803 - transposase activity [Evidence IEA]
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005046260.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056664.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030614.1
GO:0016301 - kinase activity [Evidence IEA]
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
type II toxin-antitoxin system death-on-curing family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_010890448.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015319753.1
COORDINATES: similar to AA sequence:RefSeq:WP_004517699.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015911025.1
COORDINATES: similar to AA sequence:RefSeq:WP_007738835.1
COORDINATES: similar to AA sequence:RefSeq:WP_008577272.1
COORDINATES: similar to AA sequence:RefSeq:WP_004057793.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007544898.1
COORDINATES: protein motif:HMM:NF012926.2
COORDINATES: similar to AA sequence:RefSeq:WP_008577277.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004967854.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056343.1
COORDINATES: similar to AA sequence:RefSeq:WP_004515400.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024583.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005575637.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056345.1
TrmB family transcriptional regulator sugar-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006054675.1
COORDINATES: similar to AA sequence:RefSeq:WP_009365911.1
COORDINATES: similar to AA sequence:RefSeq:WP_006053999.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
multicopper oxidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008000839.1
COORDINATES: similar to AA sequence:RefSeq:WP_005040080.1
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007108404.1
TIGR04053 family radical SAM/SPASM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004050550.1
COORDINATES: protein motif:HMM:TIGR04031.1
Htur_1727 family rSAM-partnered candidate RiPP
COORDINATES: similar to AA sequence:RefSeq:WP_006181728.1
TIGR04347 family pseudo-SAM/SPASM protein
COORDINATES: similar to AA sequence:RefSeq:WP_008426059.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030951.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007108333.1
COORDINATES: similar to AA sequence:RefSeq:WP_006666866.1
COORDINATES: protein motif:HMM:NF021010.2
GO:0020037 - heme binding [Evidence IEA]
ethylbenzene dehydrogenase-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_006648831.1
COORDINATES: similar to AA sequence:RefSeq:WP_007108338.1
COORDINATES: similar to AA sequence:RefSeq:WP_015910787.1
COORDINATES: similar to AA sequence:RefSeq:WP_007275923.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_012659175.1
COORDINATES: similar to AA sequence:RefSeq:WP_005558352.1
COORDINATES: protein motif:HMM:NF015552.2
tellurite resistance/C4-dicarboxylate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007740867.1
COORDINATES: similar to AA sequence:RefSeq:WP_005046154.1
GO:0050421 - nitrite reductase (NO-forming) activity [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF028236.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF016831.2
COORDINATES: similar to AA sequence:RefSeq:WP_004062736.1
COORDINATES: similar to AA sequence:RefSeq:WP_014051823.1
COORDINATES: similar to AA sequence:RefSeq:WP_008893128.1
GO:0006817 - phosphate ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006181455.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015995.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
glycine betaine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008383571.1
COORDINATES: protein motif:HMM:NF019998.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_010902650.1
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014040369.1
COORDINATES: similar to AA sequence:RefSeq:WP_006181451.1
COORDINATES: similar to AA sequence:RefSeq:WP_007995274.1
COORDINATES: similar to AA sequence:RefSeq:WP_008383565.1
gluconate 2-dehydrogenase subunit 3 family protein
COORDINATES: protein motif:HMM:NF024871.2
COORDINATES: similar to AA sequence:RefSeq:WP_004041677.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006113953.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009761195.1
COORDINATES: similar to AA sequence:RefSeq:WP_006181243.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF036897.2
COORDINATES: similar to AA sequence:RefSeq:WP_007997554.1
GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0120225 - coenzyme A binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007997552.1
GO:0008483 - transaminase activity [Evidence IEA]
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008011965.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009761184.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007997546.1
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: similar to AA sequence:RefSeq:WP_007997542.1
COORDINATES: similar to AA sequence:RefSeq:WP_007977518.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007997535.1
COORDINATES: similar to AA sequence:RefSeq:WP_013880556.1
COORDINATES: similar to AA sequence:RefSeq:WP_007997528.1
COORDINATES: similar to AA sequence:RefSeq:WP_007997527.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF019380.2
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: protein motif:HMM:NF024627.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014052383.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF040138.1
COORDINATES: similar to AA sequence:RefSeq:WP_008896394.1
COORDINATES: similar to AA sequence:RefSeq:WP_006650332.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012695.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018258971.1
COORDINATES: protein motif:HMM:NF012360.2
glucose-1-phosphate thymidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006601003.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_015762986.1
COORDINATES: similar to AA sequence:RefSeq:WP_007997890.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009761178.1
COORDINATES: protein motif:HMM:NF024248.2
COORDINATES: similar to AA sequence:RefSeq:WP_010903573.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: similar to AA sequence:RefSeq:WP_007140746.1
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_008320386.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012942789.1
COORDINATES: similar to AA sequence:RefSeq:WP_006091692.1
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00125.1
adenylyltransferase/cytidyltransferase family protein
COORDINATES: protein motif:HMM:NF013811.2
COORDINATES: protein motif:HMM:NF012656.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_006054291.1
COORDINATES: similar to AA sequence:RefSeq:WP_008327117.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_015301266.1
COORDINATES: similar to AA sequence:RefSeq:WP_008309602.1
COORDINATES: similar to AA sequence:RefSeq:WP_017344565.1
COORDINATES: similar to AA sequence:RefSeq:WP_006054285.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004959330.1
COORDINATES: similar to AA sequence:RefSeq:WP_008528122.1
COORDINATES: similar to AA sequence:RefSeq:WP_006079014.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595903.1
COORDINATES: similar to AA sequence:RefSeq:WP_004516918.1
COORDINATES: similar to AA sequence:RefSeq:WP_008383755.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_007977237.1
COORDINATES: similar to AA sequence:RefSeq:WP_007977239.1
COORDINATES: similar to AA sequence:RefSeq:WP_009761308.1
COORDINATES: similar to AA sequence:RefSeq:WP_009377856.1
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004056243.1
COORDINATES: similar to AA sequence:RefSeq:WP_007140324.1
COORDINATES: similar to AA sequence:RefSeq:WP_015762937.1
COORDINATES: similar to AA sequence:RefSeq:WP_008324418.1
COORDINATES: similar to AA sequence:RefSeq:WP_007698308.1
COORDINATES: similar to AA sequence:RefSeq:WP_008007371.1
COORDINATES: similar to AA sequence:RefSeq:WP_008007346.1
COORDINATES: similar to AA sequence:RefSeq:WP_013881475.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008385396.1
COORDINATES: similar to AA sequence:RefSeq:WP_014052709.1
COORDINATES: protein motif:HMM:NF012428.2
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008312263.1
COORDINATES: protein motif:HMM:NF012398.2
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_012064421.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693657.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006883389.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014051116.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004045458.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004971318.1
COORDINATES: similar to AA sequence:RefSeq:WP_013035730.1
GO:0050131 - N-methyl-L-amino-acid oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013035693.1
COORDINATES: similar to AA sequence:RefSeq:WP_004045462.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971326.1
COORDINATES: similar to AA sequence:RefSeq:WP_013035678.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971330.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015298673.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015408823.1
COORDINATES: similar to AA sequence:RefSeq:WP_006629020.1
COORDINATES: similar to AA sequence:RefSeq:WP_008322729.1
acetyl-CoA hydrolase/transferase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019992184.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008416698.1
COORDINATES: protein motif:HMM:NF015905.2
COORDINATES: protein motif:HMM:NF013736.2
GAF domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_007980620.1
COORDINATES: similar to AA sequence:RefSeq:WP_006883275.1
COORDINATES: similar to AA sequence:RefSeq:WP_012659333.1
COORDINATES: similar to AA sequence:RefSeq:WP_008326029.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005537540.1
metal-dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006182892.1
COORDINATES: similar to AA sequence:RefSeq:WP_008096691.1
COORDINATES: protein motif:HMM:NF013223.2
GO:0006811 - monoatomic ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012245.2
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_013880718.1
COORDINATES: similar to AA sequence:RefSeq:WP_008459207.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968770.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008322470.1
COORDINATES: similar to AA sequence:RefSeq:WP_004050276.1
COORDINATES: protein motif:HMM:NF013508.2
COORDINATES: protein motif:HMM:NF019325.2
COORDINATES: similar to AA sequence:RefSeq:WP_004213573.1
PAS domain-containing sensor histidine kinase
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005534713.1
hybrid sensor histidine kinase/response regulator
bacterio-opsin activator domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004594369.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274078.1
COORDINATES: similar to AA sequence:RefSeq:WP_011223404.1
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009732947.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890426.1
COORDINATES: similar to AA sequence:RefSeq:WP_006179377.1
COORDINATES: similar to AA sequence:RefSeq:WP_015320452.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008383657.1
COORDINATES: similar to AA sequence:RefSeq:WP_004267600.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006667810.1
GO:0016208 - AMP binding [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004053755.1
COORDINATES: similar to AA sequence:RefSeq:WP_008383713.1
COORDINATES: similar to AA sequence:RefSeq:WP_014051653.1
COORDINATES: similar to AA sequence:RefSeq:WP_004598191.1
cobalamin-independent methionine synthase II family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017343057.1
COORDINATES: similar to AA sequence:RefSeq:WP_009487983.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847798.1
COORDINATES: similar to AA sequence:RefSeq:WP_009762112.1
COORDINATES: similar to AA sequence:RefSeq:WP_004048599.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945688.1
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014052752.1
COORDINATES: similar to AA sequence:RefSeq:WP_004059888.1
COORDINATES: similar to AA sequence:RefSeq:WP_008584915.1
GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008442178.1
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_011323351.1
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: similar to AA sequence:RefSeq:WP_004056069.1
COORDINATES: similar to AA sequence:RefSeq:WP_008444577.1
COORDINATES: similar to AA sequence:RefSeq:WP_004599872.1
COORDINATES: similar to AA sequence:RefSeq:WP_006651139.1
COORDINATES: similar to AA sequence:RefSeq:WP_015321771.1
COORDINATES: similar to AA sequence:RefSeq:WP_004976143.1
GO:0004471 - malate dehydrogenase (decarboxylating) (NAD+) activity [Evidence IEA]; GO:0004470 - malic enzyme activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005534495.1
COORDINATES: protein motif:HMM:NF010587.0
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008367576.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007141552.1
COORDINATES: similar to AA sequence:RefSeq:WP_007141556.1
COORDINATES: similar to AA sequence:RefSeq:WP_006088651.1
COORDINATES: protein motif:HMM:NF036688.2
COORDINATES: similar to AA sequence:RefSeq:WP_008445895.1
COORDINATES: similar to AA sequence:RefSeq:WP_008365536.1
COORDINATES: similar to AA sequence:RefSeq:WP_006113174.1
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_006113175.1
GO:0070069 - cytochrome complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0019646 - aerobic electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004966619.1
COORDINATES: similar to AA sequence:RefSeq:WP_006179402.1
COORDINATES: similar to AA sequence:RefSeq:WP_004598683.1
COORDINATES: similar to AA sequence:RefSeq:WP_006628333.1
COORDINATES: similar to AA sequence:RefSeq:WP_006431770.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693688.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693689.1
COORDINATES: similar to AA sequence:RefSeq:WP_008387268.1
COORDINATES: similar to AA sequence:RefSeq:WP_007740884.1
xanthine dehydrogenase family protein subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_008387264.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007693695.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008413894.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693698.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007693700.1
COORDINATES: similar to AA sequence:RefSeq:WP_004596948.1
COORDINATES: similar to AA sequence:RefSeq:WP_008416906.1
COORDINATES: similar to AA sequence:RefSeq:WP_005537293.1
COORDINATES: similar to AA sequence:RefSeq:WP_004062908.1
COORDINATES: similar to AA sequence:RefSeq:WP_007696895.1
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012660292.1
COORDINATES: similar to AA sequence:RefSeq:WP_015910734.1
COORDINATES: similar to AA sequence:RefSeq:WP_008446221.1
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: similar to AA sequence:RefSeq:WP_006666834.1
COORDINATES: similar to AA sequence:RefSeq:WP_006666835.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274155.1
COORDINATES: similar to AA sequence:RefSeq:WP_004516724.1
COORDINATES: similar to AA sequence:RefSeq:WP_011323164.1
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007344119.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968585.1
COORDINATES: similar to AA sequence:RefSeq:WP_006673835.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
TIGR03571 family LLM class oxidoreductase
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014044.2
type IV secretion system DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006628816.1
COORDINATES: similar to AA sequence:RefSeq:WP_007260360.1
COORDINATES: similar to AA sequence:RefSeq:WP_010904193.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009376993.1
sugar-specific transcriptional regulator TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_004060458.1
COORDINATES: similar to AA sequence:RefSeq:WP_006885440.1
COORDINATES: similar to AA sequence:RefSeq:WP_009762281.1
COORDINATES: similar to AA sequence:RefSeq:WP_014865877.1
COORDINATES: similar to AA sequence:RefSeq:WP_004043364.1
GO:0008233 - peptidase activity [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF016159.2
COORDINATES: similar to AA sequence:RefSeq:WP_008458786.1
orc1/cdc6 family replication initiation protein
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: similar to AA sequence:RefSeq:WP_019561454.1
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008094590.1
COORDINATES: protein motif:HMM:NF021759.2
COORDINATES: similar to AA sequence:RefSeq:WP_009488113.1
ribbon-helix-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009488119.1
COORDINATES: protein motif:HMM:NF024491.2
COORDINATES: similar to AA sequence:RefSeq:WP_008526920.1
COORDINATES: similar to AA sequence:RefSeq:WP_004049964.1
COORDINATES: similar to AA sequence:RefSeq:WP_004516371.1
COORDINATES: similar to AA sequence:RefSeq:WP_015408486.1
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: similar to AA sequence:RefSeq:WP_008164936.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008313223.1
COORDINATES: similar to AA sequence:RefSeq:WP_006165229.1
COORDINATES: similar to AA sequence:RefSeq:WP_008322081.1
ADP-ribosylglycohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007143875.1
type IV toxin-antitoxin system AbiEi family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_008368181.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006182416.1
COORDINATES: similar to AA sequence:RefSeq:WP_006066879.1
COORDINATES: similar to AA sequence:RefSeq:WP_010904189.1
COORDINATES: similar to AA sequence:RefSeq:WP_010904190.1
COORDINATES: similar to AA sequence:RefSeq:WP_015301690.1
COORDINATES: similar to AA sequence:RefSeq:WP_006054393.1
COORDINATES: similar to AA sequence:RefSeq:WP_012659656.1
COORDINATES: similar to AA sequence:RefSeq:WP_004060214.1
COORDINATES: similar to AA sequence:RefSeq:WP_008003716.1
COORDINATES: similar to AA sequence:RefSeq:WP_008327182.1
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: protein motif:HMM:NF023367.2
alpha-glucosidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:NF020897.2
COORDINATES: similar to AA sequence:RefSeq:WP_012945299.1
COORDINATES: similar to AA sequence:RefSeq:WP_005557534.1
carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006066995.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF040043.1
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: similar to AA sequence:RefSeq:WP_008422697.1
COORDINATES: similar to AA sequence:RefSeq:WP_008422699.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983268.1
COORDINATES: similar to AA sequence:RefSeq:WP_007741324.1
COORDINATES: similar to AA sequence:RefSeq:WP_005557530.1
COORDINATES: similar to AA sequence:RefSeq:WP_007695653.1
COORDINATES: similar to AA sequence:RefSeq:WP_007695654.1
COORDINATES: similar to AA sequence:RefSeq:WP_020221492.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009762257.1
COORDINATES: similar to AA sequence:RefSeq:WP_006882991.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385575.1
COORDINATES: similar to AA sequence:RefSeq:WP_006183540.1
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: similar to AA sequence:RefSeq:WP_007697360.1
COORDINATES: similar to AA sequence:RefSeq:WP_010903955.1
COORDINATES: similar to AA sequence:RefSeq:WP_005046175.1
COORDINATES: similar to AA sequence:RefSeq:WP_007997609.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825252.1
COORDINATES: similar to AA sequence:RefSeq:WP_018257752.1
COORDINATES: similar to AA sequence:RefSeq:WP_004049544.1
COORDINATES: similar to AA sequence:RefSeq:WP_004047914.1
COORDINATES: similar to AA sequence:RefSeq:WP_006054612.1
COORDINATES: similar to AA sequence:RefSeq:WP_006883792.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594837.1
COORDINATES: similar to AA sequence:RefSeq:WP_004972120.1
COORDINATES: similar to AA sequence:RefSeq:WP_018259133.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041089.1
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010903131.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT
COORDINATES: similar to AA sequence:RefSeq:WP_006649056.1
cobalt-factor II C(20)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006628318.1
cobalt-precorrin-4/precorrin-4 C(11)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006628319.1
COORDINATES: similar to AA sequence:RefSeq:WP_008319324.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010903136.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006106911.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968499.1
COORDINATES: similar to AA sequence:RefSeq:WP_008383854.1
CbiX/SirB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008383852.1
COORDINATES: similar to AA sequence:RefSeq:WP_010903141.1
COORDINATES: similar to AA sequence:RefSeq:WP_014039274.1
COORDINATES: similar to AA sequence:RefSeq:WP_012942210.1
GO:0051116 - cobaltochelatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018259130.1
COORDINATES: protein motif:HMM:NF004457.0
cobalt-precorrin-7 (C(5))-methyltransferase