Carassius gibelio mitochondrion, complete genome.
type: Entry
definition: Carassius gibelio mitochondrion, complete genome.
sequence version: NC_014177.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_014177.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Carassius gibelio (silver crucian carp)
organism: Carassius gibelio
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius.
reference: 1
reference: 2
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to GU170401.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16581
topology: circular
so has quality: SO_0000988
location: 1..16581
location: region:1-16581:1
RO_0002162: 101364

NC_014177
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Direct Submission
journal: Submitted (27-MAY-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

2
title: Direct Submission
author: Liang, L.
author: Han, Q.
author: Chang, Y.
author: Wang, S.
journal: Submitted (02-NOV-2009) Heilongjiang River Fishery Research Institute, 232 Hesong Abenue, Daoli, Harbin, Heilongjiang 150070, People's Republic of China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16581:1
position: 16581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16581:1:source
so part of: sequence
organism: Carassius gibelio
organelle: mitochondrion
mol type: genomic DNA
sex: male
authority: Carassius gibelio (Bloch, 1782)
note: synonym=natural gynogenetic Carassius auratus gibelio

101364
type: Taxonomy
SIO_000068: taxonomy

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 101364
so part of: sequence
location: 1..924
location: region:1-924:1
so has part: feature:1-924:1:region

position:924:1
position: 924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-924:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Phe
so part of: sequence
location: 925..993
location: region:925-993:1
so has part: feature:925-993:1:region

position:925:1
position: 925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993:1
position: 993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:925-993:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 101364
product: 12S ribosomal RNA
so part of: sequence
location: 994..1947
location: region:994-1947:1
so has part: feature:994-1947:1:region

position:994:1
position: 994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1947:1
position: 1947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:994-1947:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Val
so part of: sequence
location: 1948..2019
location: region:1948-2019:1
so has part: feature:1948-2019:1:region

position:1948:1
position: 1948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2019:1
position: 2019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1948-2019:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 101364
product: 16S ribosomal RNA
so part of: sequence
location: 2020..3700
location: region:2020-3700:1
so has part: feature:2020-3700:1:region

position:2020:1
position: 2020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3700:1
position: 3700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2020-3700:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Leu
so part of: sequence
location: 3702..3777
location: region:3702-3777:1
so has part: feature:3702-3777:1:region

position:3702:1
position: 3702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3777:1
position: 3777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3702-3777:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 101364
gene: ND1
so part of: sequence
location: 3779..4753
location: region:3779-4753:1
so has part: feature:3779-4753:1:exon
subclass of: SO_0000010

9222077
type: Gene
SIO_000068: ncbigene

position:3779:1
position: 3779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4753:1
position: 4753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3779-4753:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 101364
gene: ND1
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MLNTLMTHLINPLAYIVPVLLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAAPVLALTLAMTLWAPMPMPHPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFSGGYTLQTFNTTQESIWLLIPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAVLFLGASHIPNMPELTTINLMTKAALLSILFLWVRASYPRFRYDQLMHLVWKNFLPLTLAFVLWHTALPIALAGLPPQL
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 3779..4753
location: region:3779-4753:1
so has part: feature:3779-4753:1:exon

YP_003667934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3779-4753:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Ile
so part of: sequence
location: 4758..4829
location: region:4758-4829:1
so has part: feature:4758-4829:1:region

position:4758:1
position: 4758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4829:1
position: 4829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4758-4829:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Gln
so part of: sequence
location: complement(4828..4898)
location: region:4828-4898:-1
so has part: feature:4828-4898:-1:region

position:4828:-1
position: 4828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4898:-1
position: 4898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4828-4898:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Met
so part of: sequence
location: 4900..4968
location: region:4900-4968:1
so has part: feature:4900-4968:1:region

position:4900:1
position: 4900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4968:1
position: 4968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4900-4968:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 101364
gene: ND2
so part of: sequence
location: 4969..6013
location: region:4969-6013:1
so has part: feature:4969-6013:1:exon
subclass of: SO_0000010

9222065
type: Gene
SIO_000068: ncbigene

position:4969:1
position: 4969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6013:1
position: 6013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4969-6013:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 101364
gene: ND2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:6013,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPYVLMILLSSLGLGTTLTFASSHWLLAWMGLEINTLAITPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWMTGEWNITDLSDPLANTMFMTALALKIGLAPMHFWMPEVMQGLDLLTGLILSTWQKLAPFALIIQTAQNIDPLLLTLLGVTSTLVGGWGGLNQTQLRKILAYSSIAHMGWMIIVIQYAPQLTLIALGTYIIMTSAAFLTLKMLLTTKLNTLATTWSKSPILTATTALVLLSLGGLPPLTGFMPKWLILQELTKQDLPIIATIMALAALISLYFYLRLCYAMTLTISPNTTNSTTPWRTQTTQTSMPLTLFTMATLGLLPMTPTILMLAT
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 4969..6013
location: region:4969-6013:1
so has part: feature:4969-6013:1:exon

YP_003667935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4969-6013:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Trp
so part of: sequence
location: 6014..6084
location: region:6014-6084:1
so has part: feature:6014-6084:1:region

position:6014:1
position: 6014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6084:1
position: 6084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6014-6084:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Ala
so part of: sequence
location: complement(6087..6155)
location: region:6087-6155:-1
so has part: feature:6087-6155:-1:region

position:6087:-1
position: 6087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6155:-1
position: 6155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6087-6155:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Asn
so part of: sequence
location: complement(6157..6229)
location: region:6157-6229:-1
so has part: feature:6157-6229:-1:region

position:6157:-1
position: 6157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6229:-1
position: 6229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6157-6229:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Cys
so part of: sequence
location: complement(6263..6331)
location: region:6263-6331:-1
so has part: feature:6263-6331:-1:region

position:6263:-1
position: 6263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6331:-1
position: 6331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6263-6331:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Tyr
so part of: sequence
location: complement(6331..6401)
location: region:6331-6401:-1
so has part: feature:6331-6401:-1:region

position:6401:-1
position: 6401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6331-6401:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 101364
gene: COX1
so part of: sequence
location: 6403..7953
location: region:6403-7953:1
so has part: feature:6403-7953:1:exon
subclass of: SO_0000010

9222066
type: Gene
SIO_000068: ncbigene

position:6403:1
position: 6403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7953:1
position: 7953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6403-7953:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 101364
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MAITRWFFSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPAISQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWETPMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAAFVHWFPLLTGYTLHSAWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPDAYALWNTVSSIGSLISLVAVIMFLFILWEAFAAKREVLSVELTMTNVEWLHGCPPPYHTYEEPAFVQIQSN
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 6403..7953
location: region:6403-7953:1
so has part: feature:6403-7953:1:exon

YP_003667936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6403-7953:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Ser
so part of: sequence
location: complement(7954..8024)
location: region:7954-8024:-1
so has part: feature:7954-8024:-1:region

position:7954:-1
position: 7954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8024:-1
position: 8024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7954-8024:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Asp
so part of: sequence
location: 8028..8099
location: region:8028-8099:1
so has part: feature:8028-8099:1:region

position:8028:1
position: 8028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8099:1
position: 8099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8028-8099:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 101364
gene: COX2
so part of: sequence
location: 8112..8802
location: region:8112-8802:1
so has part: feature:8112-8802:1:exon
subclass of: SO_0000010

9222067
type: Gene
SIO_000068: ncbigene

position:8112:1
position: 8112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8802:1
position: 8802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8112-8802:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 101364
gene: COX2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:8802,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPTQLGFQDAASPVMEELLHFHDHALMIVFLISTLVLYIIIAMVSTKLTNKYILDSQEIEIVWTILPAVILVLIALPSLRILYLMDEINDPHLTIKAMGHQWYWSYEYTDYENLGFDSYMVPTQDLAPGQFRLLETDHRMVVPMESPVRVLVSAEDVLHSWAVPSLGVKMDAVPGRLNQTAFIASRPGVFYGQCSEICGANHSFMPIVVEAVPLEHFENWSSLMLEDA
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 8112..8802
location: region:8112-8802:1
so has part: feature:8112-8802:1:exon

YP_003667937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8112-8802:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Lys
so part of: sequence
location: 8803..8878
location: region:8803-8878:1
so has part: feature:8803-8878:1:region

position:8803:1
position: 8803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8878:1
position: 8878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8803-8878:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 101364
gene: ATP8
so part of: sequence
location: 8880..9044
location: region:8880-9044:1
so has part: feature:8880-9044:1:exon
subclass of: SO_0000010

9222068
type: Gene
SIO_000068: ncbigene

position:8880:1
position: 8880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9044:1
position: 9044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8880-9044:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 101364
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPGPWFAILVFSWLVFLTIIPTKILSHISPNEPTPVSAEKHKTESWDWPW
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 8880..9044
location: region:8880-9044:1
so has part: feature:8880-9044:1:exon

YP_003667938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8880-9044:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 101364
gene: ATP6
so part of: sequence
location: 9038..9721
location: region:9038-9721:1
so has part: feature:9038-9721:1:exon
subclass of: SO_0000010

9222069
type: Gene
SIO_000068: ncbigene

position:9038:1
position: 9038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9721:1
position: 9721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9038-9721:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 101364
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MMVSFFDQFASPSYLGIPLIAIAIALPWVLYPTSSSRWINNRLITIQGWFINRFTNQLMLPLNVGGHKWALLLASLMIFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTVALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 9038..9721
location: region:9038-9721:1
so has part: feature:9038-9721:1:exon

YP_003667939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9038-9721:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 101364
gene: COX3
so part of: sequence
location: 9721..10505
location: region:9721-10505:1
so has part: feature:9721-10505:1:exon
subclass of: SO_0000010

9222070
type: Gene
SIO_000068: ncbigene

position:10505:1
position: 10505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9721-10505:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 101364
gene: COX3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:10504..10505,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHAYHMVDPSPWPLTGAIAALLMTSGLAIWFHFHSTTLMTLGLILLLLTMYQWWRDIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGITPLDPFEVPLLNTAVLLASGVTVTWAHHSIMEGERKQAIQSLALTILLGLYFTALQAMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQIQYHFTSEHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 9721..10505
location: region:9721-10505:1
so has part: feature:9721-10505:1:exon

YP_003667940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9721-10505:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Gly
so part of: sequence
location: 10506..10577
location: region:10506-10577:1
so has part: feature:10506-10577:1:region

position:10506:1
position: 10506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10577:1
position: 10577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10506-10577:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 101364
gene: ND3
so part of: sequence
location: 10578..10926
location: region:10578-10926:1
so has part: feature:10578-10926:1:exon
subclass of: SO_0000010

9222071
type: Gene
SIO_000068: ncbigene

position:10578:1
position: 10578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10926:1
position: 10926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10578-10926:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 101364
gene: ND3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:10926,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLIMTILTITTALSLILATISFWLPQMNPDAEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLNNPTGTFFWATTVLILLTLGLIYEWTQGGLEWAE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 10578..10926
location: region:10578-10926:1
so has part: feature:10578-10926:1:exon

YP_003667941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10578-10926:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Arg
so part of: sequence
location: 10927..10996
location: region:10927-10996:1
so has part: feature:10927-10996:1:region

position:10927:1
position: 10927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10996:1
position: 10996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10927-10996:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 101364
gene: ND4L
so part of: sequence
location: 10997..11293
location: region:10997-11293:1
so has part: feature:10997-11293:1:exon
subclass of: SO_0000010

9222072
type: Gene
SIO_000068: ncbigene

position:10997:1
position: 10997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11293:1
position: 11293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10997-11293:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 101364
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALALWALQFESTGFSTAPMLLLAFSACEASTGLALLVATARTHGTDRLQNLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 10997..11293
location: region:10997-11293:1
so has part: feature:10997-11293:1:exon

YP_003667942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10997-11293:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 101364
gene: ND4
so part of: sequence
location: 11287..12667
location: region:11287-12667:1
so has part: feature:11287-12667:1:exon
subclass of: SO_0000010

9222073
type: Gene
SIO_000068: ncbigene

position:11287:1
position: 11287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12667:1
position: 12667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11287-12667:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 101364
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:12667,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKVLIPTFMLFPTIWLTSPKWLWTTTTAHSLLIASISLMWFKWTSETGWTSSNTYLATDPLSTPLLVLTCWLLPLMILASQNHINPEPISRQRLYITLLASLQAFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSQPLQLDSWGHMIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQIIFPLTAVWWFIANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLGTLITAGYSLYMFLMSQRGPTPNHITGLQPFHTREHLLMTLHLIPVILLVTKPELMWGWCY
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 11287..12667
location: region:11287-12667:1
so has part: feature:11287-12667:1:exon

YP_003667943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11287-12667:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-His
so part of: sequence
location: 12668..12736
location: region:12668-12736:1
so has part: feature:12668-12736:1:region

position:12668:1
position: 12668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12736:1
position: 12736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12668-12736:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Ser
so part of: sequence
location: 12737..12805
location: region:12737-12805:1
so has part: feature:12737-12805:1:region

position:12737:1
position: 12737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12805:1
position: 12805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12737-12805:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Leu
so part of: sequence
location: 12807..12879
location: region:12807-12879:1
so has part: feature:12807-12879:1:region

position:12807:1
position: 12807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12879:1
position: 12879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12807-12879:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 101364
gene: ND5
so part of: sequence
location: 12883..14706
location: region:12883-14706:1
so has part: feature:12883-14706:1:exon
subclass of: SO_0000010

9222074
type: Gene
SIO_000068: ncbigene

position:12883:1
position: 12883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14706:1
position: 14706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12883-14706:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 101364
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MTLIMHSSLLLIFFILVYPLLTTLNPNQQGSNMAGMTKVAVSSAFFISLLPLMIFLNLKTEGIITNWQWMNTQTFDVNISFKFDHYSLIFVPIALYVTWSILEFALWYMHSDPYIDRFFKYLLTFLVAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAVIYNRVGDIGLIMTMAWFAMNLNSWEIQQIFVLSKNFDLTIPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNQLALTTCLCLGALTSLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLFNIMPATSTYFTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSFRLVYFVVMGTPRFLALSPINENNPLVINSIKRLAWGSIIAGLIITQNFLPVKTPIMTMPTTLKMAALLVTIAGLLVAMELANMTSKQVKVTPMIPLHHFSNMLGFFPAIIHRLLPKLKLTLGQSAATQLDKTWLEAMGPKGLALTQMTMAKVTNDISRGMIKTYLTIFLLTLILAILPVLL
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 12883..14706
location: region:12883-14706:1
so has part: feature:12883-14706:1:exon

YP_003667944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12883-14706:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 101364
gene: ND6
so part of: sequence
location: complement(14703..15224)
location: region:14703-15224:-1
so has part: feature:14703-15224:-1:exon
subclass of: SO_0000010

9222075
type: Gene
SIO_000068: ncbigene

position:14703:-1
position: 14703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15224:-1
position: 15224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14703-15224:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 101364
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MTYFMFLLLMALVVGLVAVASNPTPYFAALGLVVAAGVGCGVLVGHGGSFLSLVLFLIYLGGMLVVFAYSAALAAEPYPEAWGSRSVLGYVLVYLLGVGLVAGFFWGGWYEGSWVVVDGLKEFSVLRGDVSGVAVMYSSGGGMLVICAWVLLLTLLVVLELTRGLSRGALRAV
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(14703..15224)
location: region:14703-15224:-1
so has part: feature:14703-15224:-1:exon

YP_003667945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14703-15224:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Glu
so part of: sequence
location: complement(15225..15293)
location: region:15225-15293:-1
so has part: feature:15225-15293:-1:region

position:15225:-1
position: 15225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15293:-1
position: 15293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15225-15293:-1:region

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 101364
gene: CYTB
so part of: sequence
location: 15299..16439
location: region:15299-16439:1
so has part: feature:15299-16439:1:exon
subclass of: SO_0000010

9222076
type: Gene
SIO_000068: ncbigene

position:15299:1
position: 15299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16439:1
position: 16439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15299-16439:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 101364
gene: CYTB
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:16439,aa:TERM)
transl table: 2
product: cytochrome b
translation: MASLRKTHPLIKIANDALVDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVTHICRDVNYGWLIRNIHANGASFFFICIYMHIARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGDMLVQWIWGGFSVDNATLTRFFAFHFLLPFIIAAATVIHLLFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFVIMLLALTLLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQRGLTFRPITQFLFWTLVADMIILTWIGGMPVEHPFIIIGQIASVLYFALFLVLFPLAGWLENKALKWA
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 15299..16439
location: region:15299-16439:1
so has part: feature:15299-16439:1:exon

YP_003667946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15299-16439:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Thr
so part of: sequence
location: 16440..16511
location: region:16440-16511:1
so has part: feature:16440-16511:1:region

position:16440:1
position: 16440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16511:1
position: 16511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16440-16511:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 101364
product: tRNA-Pro
so part of: sequence
location: complement(16511..16580)
location: region:16511-16580:-1
so has part: feature:16511-16580:-1:region

position:16511:-1
position: 16511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16580:-1
position: 16580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16511-16580:-1:region