Rattus rattus isolate New Zealand chromosome 15, Rrattus_CSIRO_v1, whole genome shotgun sequence.
type: Entry
definition: Rattus rattus isolate New Zealand chromosome 15, Rrattus_CSIRO_v1, whole genome shotgun sequence.
sequence version: NC_046168.1
sequence date: 2020-03-14
sequence: sequence
division: CON
label: NC_046168.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA612505
dblink: SAMN12855339
keyword: WGS
keyword: RefSeq
source: Rattus rattus (black rat)
organism: Rattus rattus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021562.1.\nAssembly name: Rrattus_CSIRO_v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the CSIRO on 2020/03/04. The\noriginal whole-genome shotgun project has the accession\nJAAIVD000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: CSIRO\nAssembly Date :: 01-SEP-2019\nAssembly Method :: Flye v. 2.5; allhic v. 0.9.8; racon v.\n 1.4.6\nAssembly Name :: Rrattus_CSIRO_v1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 130.0x\nSequencing Technology :: Illumina HiSeq; Oxford Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rattus rattus Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 79318243
topology: linear
so has quality: SO_0000987
location: 1..79318243
location: region:1-79318243:1
RO_0002162: 10117

NC_046168
type: RefSeq
SIO_000068: refseq

PRJNA612505
type: BioProject
SIO_000068: bioproject

SAMN12855339
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79318243:1
position: 79318243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-79318243:1:source
so part of: sequence
organism: Rattus rattus
mol type: genomic DNA
isolate: New Zealand
chromosome: 15
sex: male
tissue type: muscle
dev stage: adult

10117
type: Taxonomy
SIO_000068: taxonomy

LOC116884893
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 76531..79011
location: region:76531-79011:1
so has part: feature:76531-79011:1:exon

116884893
type: Gene
SIO_000068: ncbigene

position:76531:1
position: 76531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79011:1
position: 79011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76531-79011:1:exon

LOC116884893
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC116884893
subclass of: SO_0000673
so part of: LOC116884893
location: 76531..76614
location: region:76531-76614:1
so has part: feature:76531-76614:1:exon

position:76614:1
position: 76614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76531-76614:1:exon

LOC116884893
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC116884893
subclass of: SO_0000673
so part of: LOC116884893
location: 78858..79011
location: region:78858-79011:1
so has part: feature:78858-79011:1:exon

position:78858:1
position: 78858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78858-79011:1:exon

LOC116884479
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884479
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(161411..162649)
location: region:161411-162649:-1
so has part: feature:161411-162649:-1:exon
subclass of: SO_0000010

116884479
type: Gene
SIO_000068: ncbigene

position:161411:-1
position: 161411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162649:-1
position: 162649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161411-162649:-1:exon

LOC116884479
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884479
product: ribosome production factor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 16 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885595.1
SIO_010081: LOC116884479
subclass of: SO_0000673
so part of: LOC116884479
location: complement(161411..162649)
location: region:161411-162649:-1
so has part: feature:161411-162649:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161411-162649:-1:exon

LOC116884479
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884479
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome production factor 1-like
translation: MAKAGEKSGGGGKRGLKRKAPAEEPQETAVASDGTAESGVQSAKGAAFPPGFSISEIKNKQRRHLMFTRWKQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFKSEKKVGIQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL
SIO_010081: LOC116884479
subclass of: SO_0000673
so part of: LOC116884479
location: complement(161591..162640)
location: region:161591-162640:-1
so has part: feature:161591-162640:-1:exon

XP_032741486.1
type: Protein
SIO_000068: ncbiprotein

position:161591:-1
position: 161591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162640:-1
position: 162640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161591-162640:-1:exon

LOC116884894
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 322095..327184
location: region:322095-327184:1
so has part: feature:322095-327184:1:exon

116884894
type: Gene
SIO_000068: ncbigene

position:322095:1
position: 322095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327184:1
position: 327184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322095-327184:1:exon

LOC116884894
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884894
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116884894
subclass of: SO_0000673
so part of: LOC116884894
location: 322095..322514
location: region:322095-322514:1
so has part: feature:322095-322514:1:exon

position:322514:1
position: 322514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322095-322514:1:exon

LOC116884894
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884894
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116884894
subclass of: SO_0000673
so part of: LOC116884894
location: 326892..327184
location: region:326892-327184:1
so has part: feature:326892-327184:1:exon

position:326892:1
position: 326892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326892-327184:1:exon

Pcdhac1
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Pcdhac1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 697022..699914
location: region:697022-699914:1
so has part: feature:697022-699914:1:exon
subclass of: SO_0000010

116884963
type: Gene
SIO_000068: ncbigene

position:697022:1
position: 697022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699914:1
position: 699914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697022-699914:1:exon

Pcdhac1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Pcdhac1
product: protocadherin alpha subfamily C, 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886167.1
SIO_010081: Pcdhac1
subclass of: SO_0000673
so part of: Pcdhac1
location: 697022..699914
location: region:697022-699914:1
so has part: feature:697022-699914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:697022-699914:1:exon

Pcdhac1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Pcdhac1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-C1
translation: MVGWGMAVLCWWVSCGAAAGQLEYSVLEETEPGVTVGNIVSDLRLSAAALSLRNFRFLSNHREPYFGVDLGSGSLVVQEPADRERLCGTKAACILTYELMFEDPLELHKMRVRLLDTNDNSPIFPAGDVHLHIPEFLPPGSRFILPNAQDADVGSNGALSYSLSISQHFHLDMGSRVDGSKYPELVLEKALDREQRDTHLLVLTAHDGGLPARSGAAQVTITVVDTNDNAPVFEHSVYSTKVPETAPNGTVLFHVQALDPDEGSNGEVWYSLSNSTPAELRHLFHVHPKSGEVQVAASLGPPETLLEAFVEARDEGTFSLASTTKLLVEVTDVNDHAPQIEFMTFLSSVLEDAAPGTVIALLSVKDEDLGSNGKVTCSMSSKGPFQLKASFDSYYKLLTDGPLDRERASEYQILIAASDGGSPPLSTRRTLTVSVADVNDNTPSFPQPKQELFVVENNSPGVSLGGVFAQDPDLGENGLVLYELLDVISEGMPLPSSLVSVEPTSGVITAKNSFDFEQLRGFHFQVEGRDGGIPPRSATVTVNLFVVDRNDNAPDILFPLPRNGSILVERVPRSARAGHLVTKVVAEDADSGSNAWLSYHISQASDSSLFRISVNTGELRTARLVFPTDAVKQSVVVVVQDHGEPPLSSSVTLGVLLSNAAPQVIPDFEDIWEPRTQLSAQNLYLVIALVCISFLFLGCLFFFVCFKSNQSPDCCSQSFCHSPENVRHERTMASSHCVTSATIDVTAVERLCQTYLYQASLGPGYGSNSLLLHGKYQVADLRNLAPGIEVNLPISCIQIRNRKGDHTNVNVMVSTSYGV
SIO_010081: Pcdhac1
subclass of: SO_0000673
so part of: Pcdhac1
location: 697266..699725
location: region:697266-699725:1
so has part: feature:697266-699725:1:exon

XP_032742058.1
type: Protein
SIO_000068: ncbiprotein

position:697266:1
position: 697266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699725:1
position: 699725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697266-699725:1:exon

Pcdhac2
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Pcdhac2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 750100..793891
location: region:750100-793891:1
so has part: feature:750100-793891:1:exon
subclass of: SO_0000010

116884964
type: Gene
SIO_000068: ncbigene

position:750100:1
position: 750100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793891:1
position: 793891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750100-793891:1:exon

Pcdhac2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Pcdhac2
product: protocadherin alpha subfamily C, 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 mRNAs, 22 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886169.1
SIO_010081: Pcdhac2
subclass of: SO_0000673
so part of: Pcdhac2
location: join(750100..753692,763391..763449,766350..766438,791180..793891)
location: region:750100-793891:1
so has part: feature:750100-753692:1:exon
so has part: feature:763391-763449:1:exon
so has part: feature:766350-766438:1:exon
so has part: feature:791180-793891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:750100-753692:1:exon

position:753692:1
position: 753692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:763391-763449:1:exon

position:763391:1
position: 763391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763449:1
position: 763449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:766350-766438:1:exon

position:766350:1
position: 766350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766438:1
position: 766438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:791180-793891:1:exon

position:791180:1
position: 791180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pcdhac2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Pcdhac2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-C2
translation: MEQAGARPGATEHPRPLRPLPRLLLLSFRLLLVLLPGPAASQLRYSVPEEQSPGALVGNVARALGLELRRLGPGCLRINHLGAPSPRYLELDLTNGALFVNERIDREALCEQRPRCLLSLEVLAHNPVAVSAIEVEILDINDNSPRFPRPDYQLQVSESVAPGARFHIESAQDPDVGANSVQTYELSPSEHFELDLKPLQENSKVLELVLRKGLDREQTALHHLVLTAVDGGIPARSGTAQISVRVLDTNDNSPAFDQSTYRVQLREDAPPGTLVVKLNASDPDEGSNGELRYSLSSYTSDRERQLFSIDATTGEVRVSGTLDYEESSSYQIYVQATDRGPVPMAGHCKVLVDIIDVNDNAPEVVLTDLYSPVPEDVALNTVVALLSVNDQDSGSNRKVSLGLEASLPFRLNGFGNSYTLVVSGPLDRERVAAYNITVTATDGGIPPLTSQRTLQIEISDINDNPPSFLKDSYSIYIQENNLPGVLLCTVQATDPDQKENAEVTYSLLDREIQGLPVTSYVSINSASGSLYAVNSFDYEKFREFFVTVEAQDKGRPPLSSTVTANVYVVDVNDHAPHILYPTSTNTSAAIELVPRSAPAGYLVTKVIAMDSDSGQNAWLFYHLVPTSDSDLFKVELHTGEIRITRKIGDESGTTFNLTVVVRDNGEPPLSATVAITVAVVDRVSKMLPDTQRHIKSPRTYSEITLYLIIALSTVSFIFLLTIIVLSIIKCYRYTAYGTACCGGFCGVRERSPADLYKQANNNIDARIPHGLKVQPHFIEVRGNGSLTKTYCYKACLTAGSGSDTFMFYNTGAQTGPGPGGAQASVTDNRQLTGQSRHSAGNLIILKNDAVSQNEPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQPGPGELPDKFIIPGSPAIISIRQESANNQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
SIO_010081: Pcdhac2
subclass of: SO_0000673
so part of: Pcdhac2
location: join(751131..753692,763391..763449,766350..766438,791180..791490)
location: region:751131-791490:1
so has part: feature:751131-753692:1:exon
so has part: feature:763391-763449:1:exon
so has part: feature:766350-766438:1:exon
so has part: feature:791180-791490:1:exon

XP_032742060.1
type: Protein
SIO_000068: ncbiprotein

position:751131:1
position: 751131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791490:1
position: 791490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751131-753692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:763391-763449:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:766350-766438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:791180-791490:1:exon

LOC116884918
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 808793..809197
location: region:808793-809197:1
so has part: feature:808793-809197:1:exon
subclass of: SO_0000010

116884918
type: Gene
SIO_000068: ncbigene

position:808793:1
position: 808793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809197:1
position: 809197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808793-809197:1:exon

LOC116884918
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884918
product: ATP synthase F(0) complex subunit C1, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_032886140.1
SIO_010081: LOC116884918
subclass of: SO_0000673
so part of: LOC116884918
location: 808793..809197
location: region:808793-809197:1
so has part: feature:808793-809197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:808793-809197:1:exon

LOC116884918
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884918
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:808880..808882,aa:OTHER)
transl except: (pos:808901..808903,aa:OTHER)
product: LOW QUALITY PROTEIN: ATP synthase F(0) complex subunit C1, mitochondrial-like
translation: MQTTKALIISLVLIHSYTRGLIRPVSASPXVDQRPIXELLYSSSLLQVDRWKFQTSVISQGINTAAKFIGVGAATVGVAGSGTGIDTVFGSLVTDYARNPSLKQQLFYAILGFALSEAMGLLCLTVAFLILFTM
SIO_010081: LOC116884918
subclass of: SO_0000673
so part of: LOC116884918
location: 808793..809197
location: region:808793-809197:1
so has part: feature:808793-809197:1:exon

XP_032742031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:808793-809197:1:exon

Pcdhb1
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Pcdhb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 857714..860170
location: region:857714-860170:1
so has part: feature:857714-860170:1:exon
subclass of: SO_0000010

116884267
type: Gene
SIO_000068: ncbigene

position:857714:1
position: 857714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860170:1
position: 860170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857714-860170:1:exon

Pcdhb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Pcdhb1
product: protocadherin beta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885351.1
SIO_010081: Pcdhb1
subclass of: SO_0000673
so part of: Pcdhb1
location: 857714..860170
location: region:857714-860170:1
so has part: feature:857714-860170:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:857714-860170:1:exon

Pcdhb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Pcdhb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-1
translation: MAAARRKPWQNRQVGSLLLLWCVSVGGAATIRYSVAEEMESGSFVANVAKDLGLEVGKLAERGARLVAEGNRLHFRLHRKTGDLFVKEKLDREALCGKADPCVLHFEIILAEPLQSFRVEVRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSVNTYFHLHTRFRSHGPKYAELVLDNPLDREAQPEVNLTITAVDGGSPPKSGTANIRVVVLDVNDHVPQFSRLVYRAQVPENSDNGSLVVVVTATDLDEGTNKQITYSLAENPEAVLRTFLVDPQTGEVRLRGPLDFETIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTISSVSSPLPEDSPLQTVVALFSIRDRDVRVGGKITCFLKEDLPFVVKHTFRNSYSLVTDRILDREEVSNYNITLVAMDTGPPSLSTETVIEVVISDINDNSPVFQEDSYVLTVRENNSPAVFIGKVHAEDLDLGENAQVTYSLLPPKSGDLSVFAYISINSDNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLKATDLGLFSVQRQNGEIRTLRQISERDPMMQKLVILVQDHGQPALSTTASLNILLVDGFSEPYLQFQDPSKHSRKVNPTTKYLVISLAVLSFLFLFSVTVIIIIHLYQKIKHREKFTVQEHFYDDCNFPNNLVQGRGNGSLSQPCPYDMCSATGTGNSEFRFLKRFMPNFPFPHASGEVKTENDASLPPDSNRNRSRGSEGHARAGDDYM
SIO_010081: Pcdhb1
subclass of: SO_0000673
so part of: Pcdhb1
location: 857714..860170
location: region:857714-860170:1
so has part: feature:857714-860170:1:exon

XP_032741242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:857714-860170:1:exon

LOC116884834
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884834
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 921836..924627
location: region:921836-924627:1
so has part: feature:921836-924627:1:exon
subclass of: SO_0000010

116884834
type: Gene
SIO_000068: ncbigene

position:921836:1
position: 921836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924627:1
position: 924627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921836-924627:1:exon

LOC116884834
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884834
product: protocadherin beta-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 75 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886072.1
SIO_010081: LOC116884834
subclass of: SO_0000673
so part of: LOC116884834
location: 921836..924627
location: region:921836-924627:1
so has part: feature:921836-924627:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:921836-924627:1:exon

LOC116884834
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884834
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-2-like
translation: METGEEMEQILKKRQVLLFFVLLGIAQAGSTIRRYSVEEEAENGFFVANLLKDLGLEVEELAERGPRVISKGKKLNLEFNRQTGDLLLREKLDREELCGPTEPCVVPFQVLLGNPLEIFQAELQIRDINDHSPVFLDKKIILKISEITAPGSTFLIERAQDLDVGSNSLQTYSISPNFYFHLNLQDSPDGTVLPQLVLDKVLDREERSEIRLILTALDGGNPPRSGTVQILIEVLDINDNAPAFSKLRYEVQVPENSPVGSQVATVSARDLDIGDNGQIAYAFSQASEDIRKTFRMNATSGEILLVKTLDFESIQAYTVYVQATDGGGLSGSSVVFVQVNDLNDNPPELTMSTFTNHIPENAPETVIAVFSVADPDSGDNGKMVCSIQEDLPFVLKPSVENLYTLMTNTALDRETRPQYNITITVSDMGTPRLTTQHTIAVYVSDINDNAPAFTQTSYTIFVRENNSPALHIGTISATDSDSGSNAHITYSLLPPQDPQLALNSLISINADNGQLFALRALDYEALQAFEFHVSATDGGSPALSSQAPVRLVVLDDNDNAPFVLYPLQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLGERDVLKHRLLLLVKDNGDPPRSASVTLHVLLVDGFSQPYLPLPEVARDAAQDEDALTLYLVIALASVSSLFLLSLLLFVGVRLCRRDRATSLGGCSMPEGHFPGHLVDVGGAGTLSQSYQYEVCLSGDTGTPDFKFLKPIIPNFLLQNSERENDTNPSYRNSFEFS
SIO_010081: LOC116884834
subclass of: SO_0000673
so part of: LOC116884834
location: 921979..924378
location: region:921979-924378:1
so has part: feature:921979-924378:1:exon

XP_032741963.1
type: Protein
SIO_000068: ncbiprotein

position:921979:1
position: 921979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924378:1
position: 924378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921979-924378:1:exon

LOC116884735
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 927038..930460
location: region:927038-930460:1
so has part: feature:927038-930460:1:exon
subclass of: SO_0000010

116884735
type: Gene
SIO_000068: ncbigene

position:927038:1
position: 927038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930460:1
position: 930460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927038-930460:1:exon

LOC116884735
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884735
product: protocadherin beta-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 68 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885949.1
SIO_010081: LOC116884735
subclass of: SO_0000673
so part of: LOC116884735
location: 927038..930460
location: region:927038-930460:1
so has part: feature:927038-930460:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:927038-930460:1:exon

LOC116884735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-3-like
translation: MEAREERLLKQRQVLLLFVFLGGSFAGSASRRYSVAEETERGFVIANLAKDLGLSGEELAERRAQAISKGNVQYFQLSHQTGDLLLVERLDREELCGSTEPCVLHFQILLHNPLQFITNELEVVDVNDHAPEFFENAMQLKVLESSPPGTVIPLGNAVDLDVGRNGLQNYTVSPKSHFHVHTRRRRDGRKYPELVLDRALDREEQPELSLTLTALDGGSPPRSGTTQVHILVLDINDNAPEFTQSLYEVQILEKSPVGSVITTVSASDLDTGNFGAISYVFFHASEEILKTFQLDSSTGNIQLLKSLDYETINTYEVDIEAKDGGGLSGKCIVIVQVVDVNDNPPELTLSSVNSLIPENSAETAVAVFSVSDLDSGDNGRVTCSIQNDLPFILKPSVENFYTIASERALDRESRAEYNITITVSDLGTPRLTTQHTITVRVSDINDNAPVFTQTSYTMFVRENNSPALHIGTISATDSDSGSNAHITYSLLPPYDPQLALDSLISINADNGQLFALRALDYETLQSFEFRVAATDGGSPALSSQALVRVMVLDDNDNAPFVLYPLQNASAPCTELLPRAAEPGYLVTKVVAVDSDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTSRLLSERDVPKHKLLLLVKDNGEPPRSASVTLQVLLVDGFSQPYLPLPEVARDSLQNDVDLLTLYLVIALASVSSLFLLSVLLFVGVRLCRRVRAASMGGCSVSEGHFPGHLVDVSQAGTLSQSYQYEVCLTGDSRTGEFKFLNPVIPNLFLEESERS
SIO_010081: LOC116884735
subclass of: SO_0000673
so part of: LOC116884735
location: 927822..930176
location: region:927822-930176:1
so has part: feature:927822-930176:1:exon

XP_032741840.1
type: Protein
SIO_000068: ncbiprotein

position:927822:1
position: 927822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930176:1
position: 930176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927822-930176:1:exon

LOC116884281
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 940419..943664
location: region:940419-943664:1
so has part: feature:940419-943664:1:exon
subclass of: SO_0000010

116884281
type: Gene
SIO_000068: ncbigene

position:940419:1
position: 940419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943664:1
position: 943664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940419-943664:1:exon

LOC116884281
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884281
product: protocadherin-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 91 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885364.1
SIO_010081: LOC116884281
subclass of: SO_0000673
so part of: LOC116884281
location: 940419..943664
location: region:940419-943664:1
so has part: feature:940419-943664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:940419-943664:1:exon

LOC116884281
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-3-like
translation: METTLAKTSQQRQVVFLTMLLLLRVSGSEAIKYSMPEETESGYLVANLAKDLGLKVGELATRGARIHHRGNKDLLQLDAETGNLFLKEKLDREVLCGLTEPCVLQFQIILKNPVQFFQTELQLTDINDHSPEFPDTEMLLTIPENVHPGTVFPLKAAQDSDIGSNAVQNYTVSPNLHFHVVTHSRTDGRKYPELVLDRALDREEQPELTLILTALDGGAPRRSGMTAVHIEVVDINDNAPQFVQSLYEVQVPENIPLDALVVTVSATDLDAGIYGNVAYSLFQGSRDSQPFVIDEITGEIRLSKELDFEVAPYYNVEIAAVDGGGLSGKCTVAVQVLDVNDNAPELTISTFSSPVPENSPETVVLVFGVFDQDSGDNGRMVCSIQNEHPFLLKSTFENYYTLVTERPLDRESRAEYNITITVSDLGTPRLTTQHTITVKVSDINDNAPAFTQTSYTMFVRENNSPALHIGTISATDSDSGSNAHITYSLLPPRDPQLALDSLISINADNGQLFALRALDYEALQSFEFLVGATDGGSPALSSQALVRVVVLDDNDNVPFVLYPLQNASPPCTELLPRAAEPGYLVTKVVAVDQDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTARLLSERDVPKHKLLLLVKDNGEPQRSASVTLHVLLVDGFSQPYLPLPEVALDPTYDEDNLTLYLVVALASVSSLFLLSVLLFVGVRLCRRARASSLGGYSVPEGHLPSHLVDVSGMGTLSQSYQYEVCLMGESGTTDFKFLKPSIPNSFIADN
SIO_010081: LOC116884281
subclass of: SO_0000673
so part of: LOC116884281
location: 940891..943230
location: region:940891-943230:1
so has part: feature:940891-943230:1:exon

XP_032741255.1
type: Protein
SIO_000068: ncbiprotein

position:940891:1
position: 940891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943230:1
position: 943230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940891-943230:1:exon

LOC116884279
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884279
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 949656..954417
location: region:949656-954417:1
so has part: feature:949656-954417:1:exon

116884279
type: Gene
SIO_000068: ncbigene

position:949656:1
position: 949656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954417:1
position: 954417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949656-954417:1:exon

LOC116884279
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884279
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 94 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116884279
subclass of: SO_0000673
so part of: LOC116884279
location: 949656..954417
location: region:949656-954417:1
so has part: feature:949656-954417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:949656-954417:1:exon

LOC116884280
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 961645..965167
location: region:961645-965167:1
so has part: feature:961645-965167:1:exon
subclass of: SO_0000010

116884280
type: Gene
SIO_000068: ncbigene

position:961645:1
position: 961645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965167:1
position: 965167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961645-965167:1:exon

LOC116884280
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884280
product: protocadherin beta-6-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 66 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885363.1
SIO_010081: LOC116884280
subclass of: SO_0000673
so part of: LOC116884280
location: 961645..965167
location: region:961645-965167:1
so has part: feature:961645-965167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:961645-965167:1:exon

LOC116884280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884280
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin beta-6-like
translation: METALAKTPEKRQVVFLALLLLLWEAGSEAINYSMSEETESGYLVANLAKDLGFRVGELATRGARIHHRGNKDLLQLDAETGNLLLKEKPDREALCGATEPCVLHFQVILENPVQFFQTDLQLTDINDHSPEFPDTEMLLKIQESAQPGTVFPLKAAQDSDIGSNAVQNYTVSPNLHFHVVTHSRTDGRKYPELVLDRALDREEQPELTLILTALDGGAPPRSGTTTVRIEVLDINDNAPQFVQSLYSVEVPEDSPLNALVVTVSARDLDAGIHGNVAYSLFQGTGGPQPFVIDEISGEIRLKGALDFEATPYYTMEIVATDSGGLSGKCTVAIQVVDVNDNAPKLTISSLTRSIPENAPEAVVAVFSVSDPDSGDNGRMVCSIQNELPFLLKPTYENYYTLVTEGPLDRESRAEYNITISVTDLGTPRLTTQHTITVQVMDINDNAPVFTQTSYTIFVHENNSPALHIGTISATDSDSGSNAHITYSLLPPQDPQLSLASLVSINIDNGQLFALRALDYEVLQGFEFRVSATDQGSPQLSSQALVRVVVLDDNDNAPFVLYPLQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQMLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGEPPLSASVTLQVLLVDGFSQPYLPLPEVRRDPSQENDLLTLYLVVALASVSSLFLLSVLLFVGVRLCRRARETSLGACSVPEGHFPGHLVDVSGMGTLSQSYQYEVCLTGDSGTTDFKFLNXIIPNSVLQEPSLNFSVRVTHVLVTE
SIO_010081: LOC116884280
subclass of: SO_0000673
so part of: LOC116884280
location: 961809..964191
location: region:961809-964191:1
so has part: feature:961809-964191:1:exon

XP_032741254.1
type: Protein
SIO_000068: ncbiprotein

position:961809:1
position: 961809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964191:1
position: 964191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961809-964191:1:exon

LOC116884278
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884278
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 970212..973858
location: region:970212-973858:1
so has part: feature:970212-973858:1:exon
subclass of: SO_0000010

116884278
type: Gene
SIO_000068: ncbigene

position:970212:1
position: 970212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973858:1
position: 973858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970212-973858:1:exon

LOC116884278
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884278
product: protocadherin beta-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 88 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885361.1
SIO_010081: LOC116884278
subclass of: SO_0000673
so part of: LOC116884278
location: 970212..973858
location: region:970212-973858:1
so has part: feature:970212-973858:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:970212-973858:1:exon

LOC116884278
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884278
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-4-like
translation: METLDKLHPNRQVTVFIFMMALVLVCSEPTTRYSILEETESGSFVAHLAKDLGLGAGELAARSARVVSDDYKQRLLLDPETGDLILREKLDREELCGFVDPCVLPFQVSLEKPVQYFQGELLIQDINDHAPEFPEGEILLKIPENSQPGTLLPLNLAQDLDVGSNGLQQYTVSTNPHFHVLTRNNSEGKKYPELVQDRALDREEQAELSLTLMALDGGSPPRSGTALIRILIMDINDNAPEFVNSPYEVQVPESSPPDSPILAVLARDADSGNFGSVSYGLFQASDEIKKTFSINKVTGEIRLKKELDFEKIKSYHVKIEATDGGGLSGRGSVMIEVLDVNDNAPELTISSLTSSVPENAPETIISIFRVGDRDSGENGKVVCSISENLPFLLKSTFKNFYTLVTESPLDRESRAEYNITITVSDLGTPRLTTQHTITVQVSDINDNAPSFTQTSYTMFVHENNSPALHIGTISATDADSGSNAHITYSLLPPQNPQLALTSLISINPDNGQLFALRALDYEAVQAFEFHVGASDGGSPALSSQALVRVVVLDDNDNAPFVLYPLQNASAPFTELLPRAAEPGYLVTKVVAVDADSGQNAWLSFQLLKATEPGLFIVWGHNGEVRTTRMLSERDVPKHRLLLLVKDNGDPPCSVSVTLLVLLVDGFSQPYISLPEVAPDPAQKVEDALTVYLVIALASVSSLFLLSVVFFVGIKLCRRTRAASLGGCSMPEELFPGHMVDVRGTGTLSHNYQYEVCLTGDSGTGEFKFLKPMVPNLMVQDPGREIAENLHCRDSFVFS
SIO_010081: LOC116884278
subclass of: SO_0000673
so part of: LOC116884278
location: 970627..973023
location: region:970627-973023:1
so has part: feature:970627-973023:1:exon

XP_032741252.1
type: Protein
SIO_000068: ncbiprotein

position:970627:1
position: 970627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973023:1
position: 973023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970627-973023:1:exon

LOC116884720
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884720
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 980273..983222
location: region:980273-983222:1
so has part: feature:980273-983222:1:exon
subclass of: SO_0000010

116884720
type: Gene
SIO_000068: ncbigene

position:980273:1
position: 980273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983222:1
position: 983222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980273-983222:1:exon

LOC116884720
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884720
product: protocadherin beta-8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 73 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885906.1
SIO_010081: LOC116884720
subclass of: SO_0000673
so part of: LOC116884720
location: 980273..983222
location: region:980273-983222:1
so has part: feature:980273-983222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:980273-983222:1:exon

LOC116884720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884720
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-8
translation: METALAKTPEKRQVIFLAILLLLWESGSEAIRYSMPEETESGYLIANLAKDLGLQIGELATRGARIHHNGNKELLQLDAKRGNLLLKEKPDREALCGATEPCVLHFQIILENPVQFFQTDLQLTDINDHAPEFPDTEMLLKIQEIAQPGTVFPLKAAQDSDIGSNAVQNYTVNPNLHFHVVTHSHTDGRKYPELVLDRALDREEQPELTLILTALDGGAPRRSGTTTVRIEVVDINDNAPQFVQSLYSVEVPEDSPLNALVVTVSARDLDAGIHGNVAYSLFQGSGGPQPFVIDEISGEIRLKGALDFEATPYYNMEIVATDSGGLSGKCTVSIQVVDVNDNAPKLTISSLTHSIPENAPEAVVAVFGVSDPDSGDNGRVLCSIQNELPFLLKPTFKNFYTLVTERPLDRESRAEYNITISVSDLGTPRLTTQHTITVQVSDINDNAPTFTQTSYTLFVHENNSPALHIGTISATDADSGSNGLINYSLLPPHDQQLALVSLISINSDNGQLFALRALDYEAVQAFEFYVGATDGGSPALSSQALVRVVVLDDNDNAPFVLYPLQNASAPCTELLPRAAESGYLVTKVVAVDADSGQNAWLSFQLLKATEPGLFNVWAHNGEVRTARLLSERDVPKHRLLLVVKDNGEPPRSASVMLQVLVVDGFSQPYLPLPEVALNPTKEEDMLTLYLVIALASVSSLFLLSVLLFVGVRLCRRARAASLGDCSIPEGHFPGHLVDVSSAGTLSQNYHYEVCLTEDSGTSDFKFMSPIIPTSLLQDS
SIO_010081: LOC116884720
subclass of: SO_0000673
so part of: LOC116884720
location: 980773..983112
location: region:980773-983112:1
so has part: feature:980773-983112:1:exon

XP_032741797.1
type: Protein
SIO_000068: ncbiprotein

position:980773:1
position: 980773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983112:1
position: 983112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980773-983112:1:exon

LOC116884895
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884895
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1010423..1013279
location: region:1010423-1013279:1
so has part: feature:1010423-1013279:1:exon
subclass of: SO_0000010

116884895
type: Gene
SIO_000068: ncbigene

position:1010423:1
position: 1010423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013279:1
position: 1013279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010423-1013279:1:exon

LOC116884895
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884895
product: fructose-bisphosphate aldolase A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 mRNAs, 106 ESTs, 38 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886125.1
SIO_010081: LOC116884895
subclass of: SO_0000673
so part of: LOC116884895
location: join(1010423..1010482,1011907..1013279)
location: region:1010423-1013279:1
so has part: feature:1010423-1010482:1:exon
so has part: feature:1011907-1013279:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1010423-1010482:1:exon

position:1010482:1
position: 1010482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1011907-1013279:1:exon

position:1011907:1
position: 1011907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116884895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884895
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1012420..1012422,aa:OTHER)
product: LOW QUALITY PROTEIN: fructose-bisphosphate aldolase A-like
translation: MVLMGPNERRSPWSCHGRSPPRSLFSPFTYPPAYPTDPPRPVPVKRCHRHHAPPYPALTPEQKKELADIAHRIVAPGKGILAADESTGSIAKRLHSIGTENTEENRRFYRQLLLTANDRVNPCIGGVILFHETLYQKADDGRPFPQLIKSKGGVVGIKVDKGVVTLAGTNGETTTQGLDGLSERCAQYKKDXADFAKWRCVLKIGEHTPSSLAIMENANVLARYASICQQNGIVPIVEPEILPGGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACTQKFSNEEIAMATVTALRRTVPPTVPGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYSPSGQSCAAASESLFISNHAY
SIO_010081: LOC116884895
subclass of: SO_0000673
so part of: LOC116884895
location: join(1010423..1010482,1011907..1013091)
location: region:1010423-1013091:1
so has part: feature:1010423-1010482:1:exon
so has part: feature:1011907-1013091:1:exon

XP_032742016.1
type: Protein
SIO_000068: ncbiprotein

position:1013091:1
position: 1013091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010423-1010482:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1011907-1013091:1:exon

LOC116884614
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884614
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1019741..1025033
location: region:1019741-1025033:1
so has part: feature:1019741-1025033:1:exon
subclass of: SO_0000010

116884614
type: Gene
SIO_000068: ncbigene

position:1019741:1
position: 1019741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025033:1
position: 1025033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019741-1025033:1:exon

LOC116884614
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884614
product: protocadherin beta-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 79 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885754.1
SIO_010081: LOC116884614
subclass of: SO_0000673
so part of: LOC116884614
location: 1019741..1025033
location: region:1019741-1025033:1
so has part: feature:1019741-1025033:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1019741-1025033:1:exon

LOC116884614
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884614
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-4-like
translation: MHFPTMEKLRKIHLNRQVMLFIFMMTLVLVCSEPTTRYSILEETESGSFVAHLAKDLGLGAGELAARSARVVSDDYKQRLLLDPETGDLILREKLDREELCGSVDPCVLPFQVSLEKPVQYFQGELLIQDINDHAPEFPDRELLLKIPENSQPGTRFSLKLAQDLDVGSNGLQEYRVSTNPHFHVLTRNNSEGKKYPELVQDRALDREEQAELSLTLMALDGGSPPRSGTALVRILIIDINDNAPEFVNSPYEVQVPESSPPDSPILTVLARDADAGNFGSVSYGLFQASDEIQQTFSINETTGDMRLKKKLDFEKIKSYHVEIEATDGGGLSGRGSVMIEVLDVNDNAPELTISSLTSSVPENAPETIISIFRVGDRDSGENGKVVCSISENLPFLLKSTFKNFYTLVTESPLDRESRAEYNITISVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVRENNSPALHIGTISATDSDSGSNAHITYSLLPPQNPQLALTSLISINPDNGQLFALRALDYEALQAFEFYVCATDQGSPALSSQALVRVVVLDDNDNAPFVLYPLQNASAPCTELLPRAAEPGYLITKVVAVDCDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGDPARSATVTLHVLLVDGFSQPYLPLPEVARNAVQEDDDALTLYLVIALASVSSLFLLSVLLFVGVRLCRRGREVSLGGCSIPDGHFPSHLVDVSGAGTLSQSYQYEVCLRGDSGTGEFKFLKPMVPNAGIEIMESPHCRESFVFN
SIO_010081: LOC116884614
subclass of: SO_0000673
so part of: LOC116884614
location: 1021667..1024063
location: region:1021667-1024063:1
so has part: feature:1021667-1024063:1:exon

XP_032741645.1
type: Protein
SIO_000068: ncbiprotein

position:1021667:1
position: 1021667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024063:1
position: 1024063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1021667-1024063:1:exon

LOC116884702
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1032682..1036846
location: region:1032682-1036846:1
so has part: feature:1032682-1036846:1:exon
subclass of: SO_0000010

116884702
type: Gene
SIO_000068: ncbigene

position:1032682:1
position: 1032682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036846:1
position: 1036846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1032682-1036846:1:exon

LOC116884702
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884702
product: protocadherin beta-6-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 64 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885890.1
SIO_010081: LOC116884702
subclass of: SO_0000673
so part of: LOC116884702
location: 1032682..1036846
location: region:1032682-1036846:1
so has part: feature:1032682-1036846:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1032682-1036846:1:exon

LOC116884702
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884702
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin beta-6-like
translation: METASEKRQVIFLTILLLLWKSDAETIRYSMPEETESGYLVANLAKDLGLSVGELATRGARIHHKGNKDLLQLDAETGNLILKEKPDREVLCRATEPCVLYFQIILENPVQFFQTELQLTDINDHAPEFPDRKMLLKISESAQPGTMFPLKAAQDPDIGSNAVQNYTVSPNLHFHVITHSRTDGKKYPELVLDRALDREEQPELTLTLIALDGGTPPRSGATTVHIEVVDINDNPPKFDQSLYEVQIPENSPLNALVATVSARDLDAGIHGTVTYSLFQGGELSQPFEIDEVTGEIRLKGTLDFETTPNYNIEIVARDPGGFSGKCNVAIQVLDVNDNAPKLTISSLNSSIPENAPEAVVAVFSVSDPDSGENGRIVCSIQNELPFLLKPTFENYYTLVTERPLDRESRADYNITITVSDLGIPRLTTQHTIIVQVSDINDNAPAFNQTSYTLLVHENNSPALHIGTISATDSDTGANAHISYLLLPLHDMQLAFTSLVSINQENGQLFMLRALDYETLQTFEFSVGATDHGSPALSSQALVRVVVLDDNDNAPFVLYPLQNASVPCTELLPRAAEPGYLVTKVVAVDCDSGQNAWLSFQLLKATEPGLFNVWAHNGEVRTTRLLSERDVPKHRLLLVVKDNGDPPRSATVTLHVLLVDGFSQPYLPQPEVARDPVQDDEDVLTLYLVIALASVSSLFLFSVLLFIGMRLCKRAREASLGVCSVPEGHFPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKFLKPMISNLMVQDPGREVKESPHCRDSFVFS
SIO_010081: LOC116884702
subclass of: SO_0000673
so part of: LOC116884702
location: 1034216..1036598
location: region:1034216-1036598:1
so has part: feature:1034216-1036598:1:exon

XP_032741781.1
type: Protein
SIO_000068: ncbiprotein

position:1034216:1
position: 1034216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036598:1
position: 1036598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1034216-1036598:1:exon

LOC116884758
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1042487..1045616
location: region:1042487-1045616:1
so has part: feature:1042487-1045616:1:exon
subclass of: SO_0000010

116884758
type: Gene
SIO_000068: ncbigene

position:1042487:1
position: 1042487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045616:1
position: 1045616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1042487-1045616:1:exon

LOC116884758
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884758
product: protocadherin-3-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885976.1
SIO_010081: LOC116884758
subclass of: SO_0000673
so part of: LOC116884758
location: 1042487..1045616
location: region:1042487-1045616:1
so has part: feature:1042487-1045616:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1042487-1045616:1:exon

LOC116884758
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884758
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin-3-like
translation: METALAKMPEQRQVVFLTILLLLWKSGSEAIRYSMPEETESGYLVANLAKDLGLKVGKLATRGAQIHYKGNKELLQLDAETGNLLLKVKLDREVLCGVTEPCVLHFQIILENPVQFFQTELQLTDINDHSPEFPDTEMLLKIPESSQTGTVFPLKAAQDPDIGSNAIQNYTVSPNLHFHVVTHSRTDGRKYPELVLDRALDREEQPKLTLTLTALDGGAPXRSGTTTVRIEVVDINDNAPQFIQSLYKVQILENSPLDTLVVTVSATDLDAGIYGNVAYSLFQGDGDSQPFVIDEITGEIRLSKELDFERISRYNIEIAATDGGDLSGKCTVAIQVLDVNDNAPELTIRKLTVLVPENSAETAVAVFSVSDSDSGDNGRMVCSIPNNIPFLLKPTFENYYTLVTEGPLDRENRAEYNITITVSDLGTPRLTTQHTVTVQVSDINDNAPAFTQTSYNLFVQENNSPALHIGTITATDSDSGSNAHITYSLLQLQDQQLALSSLISINPDSGQLFALRALDYESLQAFDFQVGATDGGYPALSSQVLVHVVVLDNNDNDPIVLYPLQNTSAPCTELLPREAESGYLVTKVVAVDHDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLVVKDNGEPPRSASVTLHVLLVNSFSQPYLPLPEVEHDPIHGDEEVLTLYLVIALASVSSLFLLSVLLFVGVRLCRRPRAASLGVCSVPEGHFPGHLVDVSGMGTLSQSYQYNVCLSGDSRSGEFKFLKPMIPNVMLQDSGREVKESTPCRDSFVFS
SIO_010081: LOC116884758
subclass of: SO_0000673
so part of: LOC116884758
location: 1042852..1045244
location: region:1042852-1045244:1
so has part: feature:1042852-1045244:1:exon

XP_032741867.1
type: Protein
SIO_000068: ncbiprotein

position:1042852:1
position: 1042852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045244:1
position: 1045244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1042852-1045244:1:exon

LOC116884896
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1054162..1055244
location: region:1054162-1055244:1
so has part: feature:1054162-1055244:1:exon

116884896
type: Gene
SIO_000068: ncbigene

position:1054162:1
position: 1054162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055244:1
position: 1055244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054162-1055244:1:exon

LOC116884896
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884896
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116884896
subclass of: SO_0000673
so part of: LOC116884896
location: 1054162..1055244
location: region:1054162-1055244:1
so has part: feature:1054162-1055244:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1054162-1055244:1:exon

LOC116884583
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1054852..1058758
location: region:1054852-1058758:1
so has part: feature:1054852-1058758:1:exon
subclass of: SO_0000010

116884583
type: Gene
SIO_000068: ncbigene

position:1054852:1
position: 1054852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058758:1
position: 1058758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054852-1058758:1:exon

LOC116884583
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884583
product: protocadherin-3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 82 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885724.1
SIO_010081: LOC116884583
subclass of: SO_0000673
so part of: LOC116884583
location: 1054852..1058758
location: region:1054852-1058758:1
so has part: feature:1054852-1058758:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1054852-1058758:1:exon

LOC116884583
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-3
translation: METALAKIPQQRQVFFLTILSLLWKSSSEAIRYSMPEETESGYMVANLAKDLGIKVGKLATREAQIHYKGNKELLQLDTETGNLFLKEKLDREVLCGATEPCVLNFQIILENPMQFFQTELQLTDVNDHPPEFPDTEMLLKIPENAQPGTVFPLKAAQDSDIGSNAVQNYTVSPNLHFHVVTLSRTDGRKYPELVLDRALDREEQPKLSLILTALDGGAPPRSGTTTVHIEVVDINDNSPQFVQSLYEVQVPENNPLNAFVVTVSATDLDAGVYGNVTYSLFQGYGVFQPFVIDEITGEIRLSKELDFEGISNYNIEIAATDGGGLSGKCTVAVQVLDVNDNAPELTIRKLTVLVPENSAETVVAVFSVSDSDSGDNGRMVCSIPNNIPFLLKPTFENYYTLVTEGPLDRESRAEYNITITVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVRENNSPALHIGTINATDSDSGSNAHITYSLLPPDDPQLALDSLISINAENGQLFALRAMDYEALQTFEFHVGATDGGSPALSSQALVRVVVLDDNDNAPFVLYPLQNASAPCTELLPRAAEPGYLITKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDAQKHKLLLLVKDNGDPLRSASVTLHVLVVDGFSQPYLPLAEVAQDSMQDNYDVLTLYLVIALASVSSLFLLSVVLFVGVRLCRRAREASLGDYSVPEGHFASHLVDVSGAGTLSQSYQYEVCLNGGTGTNEFNFLKPLFPILPTQAAVEERENAVVHNSVEFY
SIO_010081: LOC116884583
subclass of: SO_0000673
so part of: LOC116884583
location: 1055877..1058267
location: region:1055877-1058267:1
so has part: feature:1055877-1058267:1:exon

XP_032741615.1
type: Protein
SIO_000068: ncbiprotein

position:1055877:1
position: 1055877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058267:1
position: 1058267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055877-1058267:1:exon

LOC116884581
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1061858..1064892
location: region:1061858-1064892:1
so has part: feature:1061858-1064892:1:exon
subclass of: SO_0000010

116884581
type: Gene
SIO_000068: ncbigene

position:1061858:1
position: 1061858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064892:1
position: 1064892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061858-1064892:1:exon

LOC116884581
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884581
product: protocadherin beta-6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 96 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885723.1
SIO_010081: LOC116884581
subclass of: SO_0000673
so part of: LOC116884581
location: 1061858..1064892
location: region:1061858-1064892:1
so has part: feature:1061858-1064892:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1061858-1064892:1:exon

LOC116884581
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-6-like
translation: MSHTEVWCKTRQVMILITSMLLWEVGSESIQYAMLEETGRGTFVANLTKDLGLRVGELAAREARVVFKGNRQYLQLDPQTQDLVLNENLDREELCGSTEPCVLSFRVLLKNPLQFYQAELRVIDINDHAPEFPAKEMLLKISEMTPPGKIFPLKMAQDLDVGSHSIQSYTVNENPHFHVLTRNRSDGRKFPELVLDKALDREEQDQLRLKLTAVDGGSPPRLGTTEIQILVLDINDNAPEFAQELYEVQVPENNPVGSLLITVSARDLDTGSFGEVSYGLSQDDGLNEPFEINTKTGEVRLKSMLDFEAFPFYHVDVEALDGGGLTGKCSLVVQVLDMNDNAPEVILSSLNSPIPENLPGSIVAVFSVSDADSGSNQQVMCSIDDNLPFLLRPSMENFYTLETDGALDRESRAEYNITITVTDMGTPRLTTQHTITVQVSDINDNAPTFTQTSYTLFVHENNSPALHIGTISATDSDSGTNAHITYSLLPRNDPHLALSSLVSINADNGQLFALRALDYESLKAFEFHVNATDQGSPALHSQALVRVVVLDDNDNAPFVLYPLQNASVPCTELLPRVAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVSKHRLLLLVKDNGDPPRSASTTLHVLLVDGFSQPYLPLPEVAQDSTKDVEDTLTLYLVIALASVSSLFLFSVVLFVVVRLCRRVRAASLNGYSMPEGHFPGHLVDVSGSGTLSQSYQYEVCLRGDTGTGEFKLHKAINPHFPSVEPERNTEQSPTLRNSFLFI
SIO_010081: LOC116884581
subclass of: SO_0000673
so part of: LOC116884581
location: 1062326..1064716
location: region:1062326-1064716:1
so has part: feature:1062326-1064716:1:exon

XP_032741614.1
type: Protein
SIO_000068: ncbiprotein

position:1062326:1
position: 1062326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064716:1
position: 1064716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062326-1064716:1:exon

LOC116884716
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1072337..1077035
location: region:1072337-1077035:1
so has part: feature:1072337-1077035:1:exon
subclass of: SO_0000010

116884716
type: Gene
SIO_000068: ncbigene

position:1072337:1
position: 1072337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077035:1
position: 1077035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072337-1077035:1:exon

LOC116884716
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884716
product: protocadherin beta-14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 79 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885902.1
SIO_010081: LOC116884716
subclass of: SO_0000673
so part of: LOC116884716
location: 1072337..1077035
location: region:1072337-1077035:1
so has part: feature:1072337-1077035:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1072337-1077035:1:exon

LOC116884716
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-14
translation: MMKTSLHKAPRKRQVTAIIFLLLLWEAGSATIKYSILEETDRGSLVGNLAKDLGLSLRELVIRGAQILSKGNKQLLQLEQKSGNLLMKEKLDREELCGSTNPCILPFQVLLKSPVQFIQGEIQLQDVNDHAPEFMEDEILLKIMENSHPGATFPLKIAQDLDVGSNTVQNYTISTNSHFHVLTRNHSDGRKYPELVLDKALDREKQAQIRLTLTALDSGSPPKTGTTQVVIVVLDINDNAPEFAQGLYEVQVQENSPVGSLVITVSARDLDAGTHGELSYSLFQSSNQVLRAFEINTNTGEIRVKKLLDFEETQSYRMEIEASDGGGLSGKCTVVINVTDVNDNAPELTMSLLVSDIPENSPETVVAVFGISDPDSEDNGKMVCSIQDHLPFLLKPNEENFYTLVTERALDRESRAEYNITITVTDMGTPRLTTRHTITVQVSDINDNAPAFTQTSYTMFVRENNSPALHIGTISATDSDSGSNAHITYSLLPPRDPQLALDSLISINADNGQLFALRALDYEALQAFEFRVGATDRGSPALSSQALVRVVVLDDNDNAPFVLYPLQNASAPFTELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRMLSERDVPKHRLLLLVKDNGDPPRSASVTLHVLLVDGFSQPYLPLPEVAHDPAQEENALTLYLVIALASVSSLFLLSVLLFVGVRLCRRARETSLGGCSVPDGHFPGHLVDVSGTGTLSQSYQYEVCLTGGTGTNEFKFLKPVLPNFLNDEGYRNTEENSNFRDCLGFS
SIO_010081: LOC116884716
subclass of: SO_0000673
so part of: LOC116884716
location: 1074045..1076441
location: region:1074045-1076441:1
so has part: feature:1074045-1076441:1:exon

XP_032741793.1
type: Protein
SIO_000068: ncbiprotein

position:1074045:1
position: 1074045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076441:1
position: 1076441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074045-1076441:1:exon

LOC116884836
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1081039..1081473)
location: region:1081039-1081473:-1
so has part: feature:1081039-1081473:-1:exon

116884836
type: Gene
SIO_000068: ncbigene

position:1081039:-1
position: 1081039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081473:-1
position: 1081473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081039-1081473:-1:exon

LOC116884836
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884836
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
pseudo: true
SIO_010081: LOC116884836
subclass of: SO_0000673
so part of: LOC116884836
location: complement(1081039..1081473)
location: region:1081039-1081473:-1
so has part: feature:1081039-1081473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1081039-1081473:-1:exon

LOC116884868
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1104649..1119488
location: region:1104649-1119488:1
so has part: feature:1104649-1119488:1:exon
subclass of: SO_0000010

116884868
type: Gene
SIO_000068: ncbigene

position:1104649:1
position: 1104649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119488:1
position: 1119488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104649-1119488:1:exon

LOC116884868
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884868
product: protocadherin beta-16-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886108.1
SIO_010081: LOC116884868
subclass of: SO_0000673
so part of: LOC116884868
location: join(1104649..1105031,1109255..1112002)
location: region:1104649-1112002:1
so has part: feature:1104649-1105031:1:exon
so has part: feature:1109255-1112002:1:exon

position:1112002:1
position: 1112002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104649-1105031:1:exon

position:1105031:1
position: 1105031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1109255-1112002:1:exon

position:1109255:1
position: 1109255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116884868
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-13-like isoform X2
translation: MEGILGFILKVLERMESRLEQAVKKRQVLFLYVFLGASWASAEQLQYSVAEETERGTFLANLAKDLGLGLGELSAREARIVISKGNKLDLQLDQETGDLLLNEKVDREELCGHTEPCLLSFQVLLDNPLDIFQAELEVTDINDHSPEFLDKEITLKISESSLPGATFPLKNAQDMDVGQNGIDSYLVSSNSYFRVLTRKRSDGKKYPELILDRVLDREEEAELRLTLTAQDGGSPPRSGTTEVHVEVLDINDNAPQFEQLFYRVQIPEDSPIGFLIITVSATDKDIGVNGEISYSLFQVSNDISKTFSIHPLTGEVRLKEHLDFEKTQSYEINIEARDAGTFSGKCTILTQVVDVNDHAPEITLSAFTNSILENLPETMVAVFSVSDLDSGENGKISCSIQDDLPFFLKPSGENFYTLLSQKPLDREAVAEYNITITVADMGNPILKTQVNFTVQVSDVNDNAPIFTQTSYTMFVRENDSPALHIGTISATDSDSGSNAHITYSLLPPQDPQLSLNSLISINADNGQLFALRALDYEALQVFEFQVDATDQGSPALSNQALVRVVVLDDNDNTPFVLYPLQNASAPYTELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVSKHRLLLVVKDNGEPPRSSTVTLHVVLVDSFSQPYLPLPEVERDPAQEDSELTLYLVIALASVSLLFLVSVLLFIGVRMCRRAREVSLGVCSVPEGHFPGHLVDVSGAGTLSQSYQYEVCLTGDTGTGEFKFLKPILPNFQDHSLRPEMGENPNSRNDWGMVFS
SIO_010081: LOC116884868
subclass of: SO_0000673
so part of: LOC116884868
location: join(1104792..1105031,1109255..1111459)
location: region:1104792-1111459:1
so has part: feature:1104792-1105031:1:exon
so has part: feature:1109255-1111459:1:exon

XP_032741999.1
type: Protein
SIO_000068: ncbiprotein

position:1104792:1
position: 1104792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111459:1
position: 1111459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104792-1105031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1109255-1111459:1:exon

LOC116884868
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884868
product: protocadherin beta-16-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886109.1
SIO_010081: LOC116884868
subclass of: SO_0000673
so part of: LOC116884868
location: join(1107195..1109740,1116883..1119488)
location: region:1107195-1119488:1
so has part: feature:1107195-1109740:1:exon
so has part: feature:1116883-1119488:1:exon

position:1107195:1
position: 1107195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1107195-1109740:1:exon

position:1109740:1
position: 1109740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1116883-1119488:1:exon

position:1116883:1
position: 1116883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116884868
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-13-like isoform X3
translation: MEASRKLICRQRQVLFSFLLLGFSLKTAGELRRYSVVEEKEGRSFVTNLIKDLGLGQLEISRRGAKVISKGNKLDLQLDQETGDLLLNEKVDREELCGHTEPCLLSFQVLLDNPLDIFQAELEVTDINDHSPEFLDKEITLKISESSLPGATFPLKNAQDMDVGQNGIDSYLVSSNSYFRVLTRKRSDGKKYPELILDRVLDREEEAELRLTLTAQDGGSPPRSGTTEVLIEVVDTNDNAPEFQQPTYQVQIPENSPTGSLVLTVSANDLDSGDYGKVLYALSQPSEDISKTFEVNPVTGEIRLRKEVDFETIPSYEVDIKATDGGGLSGKCTLLLQVVDVNDNAPEVMLSALTNPVPENSPDGVVAVFSVRDPDSGNNGKVIASIQENLPFLLKSSGKNFYTLLTKGALDREEREQLNITITVTDLGTPRLTTQHTITVQVADINDNAPSFTQTSYTMFVRENNSPALHIGTISATDSDSGSNAHITYSLLPPQDPQLALDSLISINADNGQLFALRALDYEALQGFEFHVGATDGGFPALSSQALVRVVVLDDNDNAPFVLYPLQNASAPFTELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFNVWAHNGEVRTSRLLSERDAPKHKLLLVVKDNGDPPRSASVMLHVLVVDAFSQPYLPLPEVAHDPAQEEDALTLYLVIALASVSSLFLLSVLLFVGVRLCRRARAASLSAYSVPEGHFPGQLVDVRGMGTLSQSYQYDVCLMGDSSGTSEFNFLKPVLPSSLHQCSGKEIEGNSTLQNSFGFHH
SIO_010081: LOC116884868
subclass of: SO_0000673
so part of: LOC116884868
location: join(1109057..1109740,1116883..1118601)
location: region:1109057-1118601:1
so has part: feature:1109057-1109740:1:exon
so has part: feature:1116883-1118601:1:exon

XP_032742000.1
type: Protein
SIO_000068: ncbiprotein

position:1109057:1
position: 1109057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118601:1
position: 1118601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109057-1109740:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1116883-1118601:1:exon

LOC116884868
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884868
product: protocadherin beta-16-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 88 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886107.1
SIO_010081: LOC116884868
subclass of: SO_0000673
so part of: LOC116884868
location: 1115967..1119488
location: region:1115967-1119488:1
so has part: feature:1115967-1119488:1:exon

position:1115967:1
position: 1115967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115967-1119488:1:exon

LOC116884868
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-16-like isoform X1
translation: MEAAWMRNLRQRQVLAFFVLLSVSGAGAELGPYFIEEETERGSFVANLGKDLGVELAEISSRRARIISQENKEHLQLNVQSGDLLINERLDREELCGPIEPCVLHFQVLMENPLEVFQAELRVTDINDYSPVFSEREMILRIPENSARGNTFPLNNALDSDVDINNIQTYRLSSNSHFLVVTRNRSDGRKYPELVLEKELDREEEPELRLTLTALDGGSPPRSGTAQVLIEVVDTNDNAPEFQQPTYQVQIPENSPTGSLVLTVSANDLDSGDYGKVLYALSQPSEDISKTFEVNPVTGEIRLRKEVDFETIPSYEVDIKATDGGGLSGKCTLLLQVVDVNDNAPEVMLSALTNPVPENSPDGVVAVFSVRDPDSGNNGKVIASIQENLPFLLKSSGKNFYTLLTKGALDREEREQLNITITVTDLGTPRLTTQHTITVQVADINDNAPSFTQTSYTMFVRENNSPALHIGTISATDSDSGSNAHITYSLLPPQDPQLALDSLISINADNGQLFALRALDYEALQGFEFHVGATDGGFPALSSQALVRVVVLDDNDNAPFVLYPLQNASAPFTELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFNVWAHNGEVRTSRLLSERDAPKHKLLLVVKDNGDPPRSASVMLHVLVVDAFSQPYLPLPEVAHDPAQEEDALTLYLVIALASVSSLFLLSVLLFVGVRLCRRARAASLSAYSVPEGHFPGQLVDVRGMGTLSQSYQYDVCLMGDSSGTSEFNFLKPVLPSSLHQCSGKEIEGNSTLQNSFGFHH
SIO_010081: LOC116884868
subclass of: SO_0000673
so part of: LOC116884868
location: 1116202..1118601
location: region:1116202-1118601:1
so has part: feature:1116202-1118601:1:exon

XP_032741998.1
type: Protein
SIO_000068: ncbiprotein

position:1116202:1
position: 1116202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1116202-1118601:1:exon

LOC116884867
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1120510..1125166
location: region:1120510-1125166:1
so has part: feature:1120510-1125166:1:exon
subclass of: SO_0000010

116884867
type: Gene
SIO_000068: ncbigene

position:1120510:1
position: 1120510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125166:1
position: 1125166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1120510-1125166:1:exon

LOC116884867
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884867
product: protocadherin beta-18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 83 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886106.1
SIO_010081: LOC116884867
subclass of: SO_0000673
so part of: LOC116884867
location: 1120510..1125166
location: region:1120510-1125166:1
so has part: feature:1120510-1125166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1120510-1125166:1:exon

LOC116884867
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-18
translation: MAARRSGFPRQRQVVFLFLFGGLCLAGSQFGRYSVMEETERGSFVVNLAEDLGLGVEALAAKRTRVISDDNEQHLLLDSHTGDLLTNEKLDREKLCGSIEPCMLYFQILMDNPFQIYRAELRILDINDHSPIFQDKKMILKIPENTAVGTAFRLERAQDSDSGQNGIQNYTISPNSFFHITIHDSDDGMIYPELVLDKALDWEEQPEFSLTLTALDGGSPPRSGTATIHIAVLDINDNAPQFPQELYESQVPENSPVGLVVIKVTGEDRDSGVNAEISYSFFDASEDIRATFQINPFSGEITLRALLDYEFIKSYKLNVQAVDGGGLSARCTVLIRVLDINDNPPELIMSSLVNEVVENSPETVLAVFRINDRDSGENGKMVCYIQENLPFLLKPSVDNYYILMTEGALDRESRAVYNITITVSDLGTPKLTTQHTITVQVSDINDNAPAFTQTSYTMFVRENNSPALHIGTISATDSDSGSNAHITYSLLPPHDPQLALDSLISINADNGQLFALRALDYEALQAFEFRVGATDGGSPALNSQALVRVVVLDDNDNEPFVLYPLQNASAPYTELLPRTAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGDPPRSASVTLQVLLVDGFSQPYLPLPDVSRNPTEGEEDVLTLYLVIALASVSSLFLLSVLLFVGVRLCRRARAASLGGCSVPEGHFPDHLVDVSGTGTLSQSYQYEVCLMGGSSGTSDFKFLKPIYPQVHAYGPQDNSDEKPTF
SIO_010081: LOC116884867
subclass of: SO_0000673
so part of: LOC116884867
location: 1120677..1123055
location: region:1120677-1123055:1
so has part: feature:1120677-1123055:1:exon

XP_032741997.1
type: Protein
SIO_000068: ncbiprotein

position:1120677:1
position: 1120677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123055:1
position: 1123055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1120677-1123055:1:exon

LOC116884865
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1127427..1131338
location: region:1127427-1131338:1
so has part: feature:1127427-1131338:1:exon
subclass of: SO_0000010

116884865
type: Gene
SIO_000068: ncbigene

position:1127427:1
position: 1127427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131338:1
position: 1131338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1127427-1131338:1:exon

LOC116884865
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884865
product: protocadherin beta-11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 87 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886104.1
SIO_010081: LOC116884865
subclass of: SO_0000673
so part of: LOC116884865
location: 1127427..1131338
location: region:1127427-1131338:1
so has part: feature:1127427-1131338:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1127427-1131338:1:exon

LOC116884865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-11-like
translation: MENRGEHYLQTRQVLLLFVFLGMSRAHSVARRLSVVEEMPSGALVGNLEKDLGLEVGELSARGAQVASNNNKLPLQLNINTGDLLLSEPLDREELCGSIEPCVLHFQVLLKNPLKILQVELQVMDVNDNSPVFLEKEMVLEIPENSPVGAVFLLESATDLDVGINTVKSYMISQSSHFHVTMRVNPDGRKYPELVLDKVLDYEEQPELSLILTALDGGTPSRSGTALVRVEVIDANDNSPEFDQMFYEVRIPENSRLGSLIITASASDLDSGTNGELSYAFSHASEDIRKTFAINKNSGEISLIGYLDFETTESYSIIIKATDRGGLFGKSTVRIQVMDVNDNFPEIAVSSFVSPIPENAVETLVMIFSIQDKDSGENSKMVCSIPEDLPFVLKSSIENYYHLETEGALDRENRAEYNITISVSDQGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVRENNSPALHIGTISATDSDSGSNAHITYSLLPPRDPQLALDSLISINADNGQLFALRALDYEALQAFEFHVGATDRGSPALSSQALVRVVVLDDNDNAPFVLYPLQNASAPYTELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGDPPRSASVMLQVLLVDGFSQPYLPLPEVARDSMPDVDNMLTLYLVIALASVSSLFLLSVMLFVGVRLCRRARAASLGGCSVPEGHFPDHLVDISGAGTLSQSYQYEVCLMGGSGTNEFRFLKPVSPNLKPQFPGKEMEESPTLRNSFGLFSDCN
SIO_010081: LOC116884865
subclass of: SO_0000673
so part of: LOC116884865
location: 1128667..1131075
location: region:1128667-1131075:1
so has part: feature:1128667-1131075:1:exon

XP_032741995.1
type: Protein
SIO_000068: ncbiprotein

position:1128667:1
position: 1128667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131075:1
position: 1131075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1128667-1131075:1:exon

LOC116885113
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116885113
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1133161..1133267
location: region:1133161-1133267:1
so has part: feature:1133161-1133267:1:exon
subclass of: SO_0000578

116885113
type: Gene
SIO_000068: ncbigene

position:1133161:1
position: 1133161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133267:1
position: 1133267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133161-1133267:1:exon

LOC116885113
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10117
nc RNA class: snoRNA
gene: LOC116885113
product: small nucleolar RNA SNORA31
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00322
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004385978.1
SIO_010081: LOC116885113
subclass of: SO_0000673
so part of: LOC116885113
location: 1133161..1133267
location: region:1133161-1133267:1
so has part: feature:1133161-1133267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1133161-1133267:1:exon

LOC116884866
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884866
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1133262..1138952
location: region:1133262-1138952:1
so has part: feature:1133262-1138952:1:exon
subclass of: SO_0000010

116884866
type: Gene
SIO_000068: ncbigene

position:1133262:1
position: 1133262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138952:1
position: 1138952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133262-1138952:1:exon

LOC116884866
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884866
product: protocadherin beta-14-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 84 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886105.1
SIO_010081: LOC116884866
subclass of: SO_0000673
so part of: LOC116884866
location: 1133262..1138952
location: region:1133262-1138952:1
so has part: feature:1133262-1138952:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1133262-1138952:1:exon

LOC116884866
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884866
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-14-like
translation: MGNRKTLILQKRQVLVFFVLLGLSQASAESLRYSVAEETEIGSFVANLARDLGLGVAELSSREARVVSDDNKKHLLLNLLTGDLLLSERLDREELCGSTEPCVLPFQVVLENPLQFYRAELHVRDINDHAPTFLDKETTIKIPESAAIGATFLIENVQDLDIGSNSLQDYSISPSSHFYVKIHESGDGKIYPELVLDRALDHEEESELRLTLTALDGGSPPRSGTTLVLIKVLDINDNAPEFAQNFYEVQIPEDTPVGSSIITISAKDLDMGNYGKISYSFLHATEDVRKTFEINPTSGEVNLRSLLDFEVIQSYSVTIQATDGGGLSAKCTLSVKVVDINDNAPEVIISSVTKTIPENASETLITLFSVRDQDSGDNGRILCSIPDDLPFILKPTFKNFFTLLSEKALDRESKAEYNITITVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVRENNSPALHIGTISATDSDSGSNAHITYSLLPPRDPQLALDSLISINADNGQLFALRALDYEALQAFEFRVGATDRGSPALSSQALVRVVVLDDNDNAPFVLYPLQNASAPYTELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTSRLLSERDAPKHKLLLMVKDNGDPPRSASVMLHVLVVDAFSQPYLPLPEVAHNPAHDEDTLTLYLVIALASVSSLFLLSVLLFVGVRLCKKARAASLGGCSVPEGHFPGHLVDVTGTGTLSQNYQYEVCLTGSTGTNEFKFLKPVMPSLQLQDPDSNMLVKENFRNSLGFNIQ
SIO_010081: LOC116884866
subclass of: SO_0000673
so part of: LOC116884866
location: 1135702..1138101
location: region:1135702-1138101:1
so has part: feature:1135702-1138101:1:exon

XP_032741996.1
type: Protein
SIO_000068: ncbiprotein

position:1135702:1
position: 1135702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138101:1
position: 1138101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1135702-1138101:1:exon

LOC116884566
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884566
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1142009..1145075
location: region:1142009-1145075:1
so has part: feature:1142009-1145075:1:exon
subclass of: SO_0000010

116884566
type: Gene
SIO_000068: ncbigene

position:1142009:1
position: 1142009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145075:1
position: 1145075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1142009-1145075:1:exon

LOC116884566
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884566
product: protocadherin beta-18-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 65 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885708.1
SIO_010081: LOC116884566
subclass of: SO_0000673
so part of: LOC116884566
location: 1142009..1145075
location: region:1142009-1145075:1
so has part: feature:1142009-1145075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1142009-1145075:1:exon

LOC116884566
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884566
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-18-like
translation: MESVFGAAQHVRQVLVFFVFLEGSLVLSETWSYSVAEETETGSSIGNIIKDMDVGDLAARGARVIFDDYQPYLQLELETGNLLLNKKLDREALCSTSEPCILHFQVLLENPLQFFQAELLIEDVNDHTPTFLEKLIFLNISEGATPGTSFQMDNAQDLDIGMNAILNYSISPNPYFYLKLKDSGKGRRYPELVLARSLDREKEASISLILTAIDGGSLPRTGAVQVQVVVLDVNDNAPEFEKTLYEVQVPENSSVDSLVIKVSAKDLDSGINGEVSYSFSHISRDVQKTFEIHPISGEIHLKTVLDFEVIQSYTVNVQAIDGGGLSGKSAIIVQVTDVNDNPPEIVITSLMSPIQENSLSEMVVAIFSLRDQDSGENGRMICSIQDKLPFLLKPTFKNFYTLVTEHPLDRESRAEYNITITVSDLGTPRLTTQHTITVQVADINDNAPAFTQTSYTMFVHENNSPALHIGTISATDSDSGSNAHITYSLLPFHDPQLSLASLISVNADNGQLFALRALDYEALQTFEFHVGATDGGSPALSSQALVHVVVLDDNDNAPFILYPLQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSIWAHNGEVRTTRMLSERDVPKHKLLLLVKDNGEPPRSASVSLHLLVVDGFSQPYLPLPEVALDPTNVDEEALTLYLVIALASVSSLFLLSVLLFVGVRLCRKATTASLGGYSVSEGHFPGHLVDFSGAETLSQSYQYEVCLT
SIO_010081: LOC116884566
subclass of: SO_0000673
so part of: LOC116884566
location: 1142327..1144600
location: region:1142327-1144600:1
so has part: feature:1142327-1144600:1:exon

XP_032741599.1
type: Protein
SIO_000068: ncbiprotein

position:1142327:1
position: 1142327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144600:1
position: 1144600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1142327-1144600:1:exon

LOC116884567
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884567
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1146107..1149722
location: region:1146107-1149722:1
so has part: feature:1146107-1149722:1:exon
subclass of: SO_0000010

116884567
type: Gene
SIO_000068: ncbigene

position:1146107:1
position: 1146107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149722:1
position: 1149722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1146107-1149722:1:exon

LOC116884567
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884567
product: protocadherin beta-15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 74 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885709.1
SIO_010081: LOC116884567
subclass of: SO_0000673
so part of: LOC116884567
location: 1146107..1149722
location: region:1146107-1149722:1
so has part: feature:1146107-1149722:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1146107-1149722:1:exon

LOC116884567
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884567
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like
translation: MKIAREHRQRQVLLIFLFLGVAGAGWKPRRYFVMEETPSGTVLANLVQDLGLGVAELAARGAQVVCEENESRLQLDLQTGKLILNEKLDREELCGPTEPCVIHFQVLLKKPLEIFQAELQVGDINDHSPEFPEREMTVKIIETSPVDTAFLLKTAQDLDVGNNSIQNYKIGTNSHFHVSIRNRGDGRKYPELVLDKELDREEQAEFRLTLTALDGGSPPRTGTSQIRIIVLDVNDNAPEFAQAFYRVQILENSPLGSLVAKVSAKDSDIGTNGEVSYSLFHSSQKMSKTFELNALSGEVRLIKTLDFETTSSYEVDIEASDGGGLSGKCSVSIQVVDVNDNYPELIMSSLTNPIPENSPETEVALFWVRDRDSGENGKTVCSIQEGIPFTLEPSVENFFRLMTDGALDRESRAEYNITIFVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVRENNSPALHIGTISATDSDSGSNAHITYSLLPPHDPQLALTSLISINTDNGQLFALRAMDYEALQAFEFRVGATDRGSPALSSQALVRVVVLDDNDNAPFVLYPLQNASVPFTELLPRAAEPGYLITKVVAVDSDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLNERDVPKHKLLLMVKDNGEPPRSASVMLQVLLVDGFSQPYLPLPEVVRDPSDQDEDVLTLYLVIALASVSSLFLLSVLLFVGVRLCRRAREATLGVCSMAEGHFPGHLVDVSGVGTLSQSYQYEVCLTGDSQSNEFKFLKPVFSSIVDQNSGRQLGDNPSSPSILGM
SIO_010081: LOC116884567
subclass of: SO_0000673
so part of: LOC116884567
location: 1147059..1149446
location: region:1147059-1149446:1
so has part: feature:1147059-1149446:1:exon

XP_032741600.1
type: Protein
SIO_000068: ncbiprotein

position:1147059:1
position: 1147059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149446:1
position: 1149446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1147059-1149446:1:exon

Spink1
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Spink1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1245701..1254951
location: region:1245701-1254951:1
so has part: feature:1245701-1254951:1:exon
subclass of: SO_0000010

116884598
type: Gene
SIO_000068: ncbigene

position:1245701:1
position: 1245701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254951:1
position: 1254951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1245701-1254951:1:exon

Spink1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Spink1
product: serine peptidase inhibitor Kazal type 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 mRNAs, 6 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885738.1
SIO_010081: Spink1
subclass of: SO_0000673
so part of: Spink1
location: join(1245701..1245835,1248255..1248286,1249755..1249861,1254828..1254951)
location: region:1245701-1254951:1
so has part: feature:1245701-1245835:1:exon
so has part: feature:1248255-1248286:1:exon
so has part: feature:1249755-1249861:1:exon
so has part: feature:1254828-1254951:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1245701-1245835:1:exon

position:1245835:1
position: 1245835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1248255-1248286:1:exon

position:1248255:1
position: 1248255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248286:1
position: 1248286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1249755-1249861:1:exon

position:1249755:1
position: 1249755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249861:1
position: 1249861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1254828-1254951:1:exon

position:1254828:1
position: 1254828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Spink1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Spink1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease inhibitor Kazal-type 1
translation: MKVAIIFLLSALVLLSLAGNTTAKVIGKKANCPNTLVGCPRDYDPVCGTDGRTYANECILCSENRKFGRSINIQRRGPC
SIO_010081: Spink1
subclass of: SO_0000673
so part of: Spink1
location: join(1245781..1245835,1248255..1248286,1249755..1249861,1254828..1254873)
location: region:1245781-1254873:1
so has part: feature:1245781-1245835:1:exon
so has part: feature:1248255-1248286:1:exon
so has part: feature:1249755-1249861:1:exon
so has part: feature:1254828-1254873:1:exon

XP_032741629.1
type: Protein
SIO_000068: ncbiprotein

position:1245781:1
position: 1245781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254873:1
position: 1254873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1245781-1245835:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1248255-1248286:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1249755-1249861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1254828-1254873:1:exon

LOC116884897
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884897
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1273221..1283130)
location: region:1273221-1283130:-1
so has part: feature:1273221-1283130:-1:exon
subclass of: SO_0000010

116884897
type: Gene
SIO_000068: ncbigene

position:1273221:-1
position: 1273221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283130:-1
position: 1283130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1273221-1283130:-1:exon

LOC116884897
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884897
product: serine protease inhibitor Kazal-type 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886126.1
SIO_010081: LOC116884897
subclass of: SO_0000673
so part of: LOC116884897
location: complement(join(1273221..1273407,1278945..1279051,1280534..1280565,1283013..1283130))
location: region:1273221-1283130:-1
so has part: feature:1283013-1283130:-1:exon
so has part: feature:1280534-1280565:-1:exon
so has part: feature:1278945-1279051:-1:exon
so has part: feature:1273221-1273407:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1283013-1283130:-1:exon

position:1283013:-1
position: 1283013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1280534-1280565:-1:exon

position:1280534:-1
position: 1280534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280565:-1
position: 1280565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1278945-1279051:-1:exon

position:1278945:-1
position: 1278945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279051:-1
position: 1279051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1273221-1273407:-1:exon

position:1273407:-1
position: 1273407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116884897
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884897
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease inhibitor Kazal-type 1-like
translation: MKVAIIFLLSALALLSLAGNPPAEVNRKTPNCPKEIMGCPRIYDPVCGTNGITYPSECSLCFENRWVGVSITALGLLPGYLKKVASSSSIYSESQIRSLTLILGHLPYSMSLSSPGDNTPTPHPHQ
SIO_010081: LOC116884897
subclass of: SO_0000673
so part of: LOC116884897
location: complement(join(1273221..1273407,1278945..1279051,1280534..1280565,1283013..1283067))
location: region:1273221-1283067:-1
so has part: feature:1283013-1283067:-1:exon
so has part: feature:1280534-1280565:-1:exon
so has part: feature:1278945-1279051:-1:exon
so has part: feature:1273221-1273407:-1:exon

XP_032742017.1
type: Protein
SIO_000068: ncbiprotein

position:1283067:-1
position: 1283067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1283013-1283067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1280534-1280565:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1278945-1279051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1273221-1273407:-1:exon

Jakmip2
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Jakmip2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1321791..1477683
location: region:1321791-1477683:1
so has part: feature:1321791-1477683:1:exon
subclass of: SO_0000010

116884464
type: Gene
SIO_000068: ncbigene

position:1321791:1
position: 1321791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1477683:1
position: 1477683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1321791-1477683:1:exon

Jakmip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Jakmip2
product: janus kinase and microtubule interacting protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032885568.1
SIO_010081: Jakmip2
subclass of: SO_0000673
so part of: Jakmip2
location: join(1321791..1322086,1416519..1416795,1424295..1424792,1428241..1428450,1430285..1430383,1434050..1434196,1434799..1434939,1436822..1436878,1437704..1437823,1438966..1439094,1440861..1440944,1441632..1441694,1444733..1444831,1445691..1445789,1446562..1446615,1447398..1447463,1451647..1451715,1460502..1460579,1462239..1462442,1468432..1468497,1471466..1471536,1477137..1477683)
location: region:1321791-1477683:1
so has part: feature:1321791-1322086:1:exon
so has part: feature:1416519-1416795:1:exon
so has part: feature:1424295-1424792:1:exon
so has part: feature:1428241-1428450:1:exon
so has part: feature:1430285-1430383:1:exon
so has part: feature:1434050-1434196:1:exon
so has part: feature:1434799-1434939:1:exon
so has part: feature:1436822-1436878:1:exon
so has part: feature:1437704-1437823:1:exon
so has part: feature:1438966-1439094:1:exon
so has part: feature:1440861-1440944:1:exon
so has part: feature:1441632-1441694:1:exon
so has part: feature:1444733-1444831:1:exon
so has part: feature:1445691-1445789:1:exon
so has part: feature:1446562-1446615:1:exon
so has part: feature:1447398-1447463:1:exon
so has part: feature:1451647-1451715:1:exon
so has part: feature:1460502-1460579:1:exon
so has part: feature:1462239-1462442:1:exon
so has part: feature:1468432-1468497:1:exon
so has part: feature:1471466-1471536:1:exon
so has part: feature:1477137-1477683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1321791-1322086:1:exon

position:1322086:1
position: 1322086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1416519-1416795:1:exon

position:1416519:1
position: 1416519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1416795:1
position: 1416795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1424295-1424792:1:exon

position:1424295:1
position: 1424295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424792:1
position: 1424792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1428241-1428450:1:exon

position:1428241:1
position: 1428241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428450:1
position: 1428450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1430285-1430383:1:exon

position:1430285:1
position: 1430285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430383:1
position: 1430383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1434050-1434196:1:exon

position:1434050:1
position: 1434050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434196:1
position: 1434196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1434799-1434939:1:exon

position:1434799:1
position: 1434799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434939:1
position: 1434939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1436822-1436878:1:exon

position:1436822:1
position: 1436822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436878:1
position: 1436878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1437704-1437823:1:exon

position:1437704:1
position: 1437704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437823:1
position: 1437823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1438966-1439094:1:exon

position:1438966:1
position: 1438966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439094:1
position: 1439094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1440861-1440944:1:exon

position:1440861:1
position: 1440861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1440944:1
position: 1440944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1441632-1441694:1:exon

position:1441632:1
position: 1441632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441694:1
position: 1441694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1444733-1444831:1:exon

position:1444733:1
position: 1444733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444831:1
position: 1444831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1445691-1445789:1:exon

position:1445691:1
position: 1445691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445789:1
position: 1445789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1446562-1446615:1:exon

position:1446562:1
position: 1446562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1446615:1
position: 1446615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1447398-1447463:1:exon

position:1447398:1
position: 1447398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447463:1
position: 1447463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1451647-1451715:1:exon

position:1451647:1
position: 1451647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451715:1
position: 1451715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1460502-1460579:1:exon

position:1460502:1
position: 1460502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1460579:1
position: 1460579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1462239-1462442:1:exon

position:1462239:1
position: 1462239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1462442:1
position: 1462442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1468432-1468497:1:exon

position:1468432:1
position: 1468432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1468497:1
position: 1468497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1471466-1471536:1:exon

position:1471466:1
position: 1471466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471536:1
position: 1471536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1477137-1477683:1:exon

position:1477137:1
position: 1477137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Jakmip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Jakmip2
product: janus kinase and microtubule interacting protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032885570.1
SIO_010081: Jakmip2
subclass of: SO_0000673
so part of: Jakmip2
location: join(1321791..1322086,1416519..1416795,1424295..1424792,1428241..1428450,1430285..1430383,1434050..1434196,1434799..1434939,1436822..1436878,1437704..1437823,1438966..1439094,1440861..1440944,1444733..1444831,1445691..1445789,1446562..1446615,1447398..1447463,1451647..1451715,1460502..1460579,1462239..1462442,1468432..1468497,1471466..1471536,1477137..1477683)
location: region:1321791-1477683:1
so has part: feature:1321791-1322086:1:exon
so has part: feature:1416519-1416795:1:exon
so has part: feature:1424295-1424792:1:exon
so has part: feature:1428241-1428450:1:exon
so has part: feature:1430285-1430383:1:exon
so has part: feature:1434050-1434196:1:exon
so has part: feature:1434799-1434939:1:exon
so has part: feature:1436822-1436878:1:exon
so has part: feature:1437704-1437823:1:exon
so has part: feature:1438966-1439094:1:exon
so has part: feature:1440861-1440944:1:exon
so has part: feature:1444733-1444831:1:exon
so has part: feature:1445691-1445789:1:exon
so has part: feature:1446562-1446615:1:exon
so has part: feature:1447398-1447463:1:exon
so has part: feature:1451647-1451715:1:exon
so has part: feature:1460502-1460579:1:exon
so has part: feature:1462239-1462442:1:exon
so has part: feature:1468432-1468497:1:exon
so has part: feature:1471466-1471536:1:exon
so has part: feature:1477137-1477683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1321791-1322086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1416519-1416795:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1424295-1424792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1428241-1428450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1430285-1430383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1434050-1434196:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1434799-1434939:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1436822-1436878:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1437704-1437823:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1438966-1439094:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1440861-1440944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1444733-1444831:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1445691-1445789:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1446562-1446615:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1447398-1447463:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1451647-1451715:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1460502-1460579:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1462239-1462442:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1468432-1468497:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1471466-1471536:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1477137-1477683:1:exon

Jakmip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Jakmip2
product: janus kinase and microtubule interacting protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032885569.1
SIO_010081: Jakmip2
subclass of: SO_0000673
so part of: Jakmip2
location: join(1413479..1415403,1416519..1416795,1424295..1424792,1428241..1428450,1430285..1430383,1434050..1434196,1434799..1434939,1436822..1436878,1437704..1437823,1438966..1439094,1440861..1440944,1441632..1441694,1444733..1444831,1445691..1445789,1446562..1446615,1447398..1447463,1451647..1451715,1460502..1460579,1462239..1462442,1468432..1468497,1471466..1471536,1477137..1477683)
location: region:1413479-1477683:1
so has part: feature:1413479-1415403:1:exon
so has part: feature:1416519-1416795:1:exon
so has part: feature:1424295-1424792:1:exon
so has part: feature:1428241-1428450:1:exon
so has part: feature:1430285-1430383:1:exon
so has part: feature:1434050-1434196:1:exon
so has part: feature:1434799-1434939:1:exon
so has part: feature:1436822-1436878:1:exon
so has part: feature:1437704-1437823:1:exon
so has part: feature:1438966-1439094:1:exon
so has part: feature:1440861-1440944:1:exon
so has part: feature:1441632-1441694:1:exon
so has part: feature:1444733-1444831:1:exon
so has part: feature:1445691-1445789:1:exon
so has part: feature:1446562-1446615:1:exon
so has part: feature:1447398-1447463:1:exon
so has part: feature:1451647-1451715:1:exon
so has part: feature:1460502-1460579:1:exon
so has part: feature:1462239-1462442:1:exon
so has part: feature:1468432-1468497:1:exon
so has part: feature:1471466-1471536:1:exon
so has part: feature:1477137-1477683:1:exon

position:1413479:1
position: 1413479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1413479-1415403:1:exon

position:1415403:1
position: 1415403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1416519-1416795:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1424295-1424792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1428241-1428450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1430285-1430383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1434050-1434196:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1434799-1434939:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1436822-1436878:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1437704-1437823:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1438966-1439094:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1440861-1440944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1441632-1441694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1444733-1444831:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1445691-1445789:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1446562-1446615:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1447398-1447463:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1451647-1451715:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1460502-1460579:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1462239-1462442:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1468432-1468497:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1471466-1471536:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1477137-1477683:1:exon

Jakmip2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Jakmip2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 2 isoform X1
translation: MSKKGRNKGEKPEALIVALQAANEDLRTKLTDIQIELHQEKSKVSKLEREKTQEAKRIRELEQRKHTVLVTELKAKLHEEKMKELQAVRENLIKQHEQEMSRTVKVRDGEIQRLKSALCALRDGSSDKVRTALTIEAREEARKQFDAERLKLLQEITDLKTAKKQVDEALSNMIQADKIKAGDLRSEHQSHQEAISKIKWESERDIRRLMDEIKAKDRIIFSLEKELETQTGYVQKLQLQKEALDEQLFLVKEAECNMSSPKREIPGRAGDGSEHCSSPDLRRNQKRIAELNATIRKLEDRNTLLGDERNELLKRVRETEKQCKPLLERNKCLAKRNDELMVSLQRMEEKLKAVTKENSEMREKITSHPPLKKLKSLNDLDQANEEQETEFLKLQVIEQQNIIDELTRDREKLIRRRKHRRSSKPIKRPVLDPFIGYDEDSMDSETSSMTSFRTDRTPATPDDDLDESLAAEESELRFRQLTKEYQALQRAYALLQEQTGGIIDAEREAKAQEQLQAEVLRYRAKIEDLEATLAQKGQDSHWVEDKQLFIKRNQELLEKIEKQEAENHRLQQELQDARDQNELLEFRNLELEERERRSPPFNLQIHPFSDGVSALQIYCMKEGVKDVNIPDLIKQLDILGDNGNLRNEEQVAIIQASTVLSLAEKWIQQIEGAEAALHQKMMELESDMEQFCKIKGYLEEELDYRKQALDQAYMRIQELEATLYNALQQETVIKFGELLSDKQQEELRTAVEKLRRQMLRKSREYDCQILQERMELLQQAHQRIRDLEDKTDIQKRQIKDLEEKFLFLFLFFSLAFILWP
SIO_010081: Jakmip2
subclass of: SO_0000673
so part of: Jakmip2
location: join(1416667..1416795,1424295..1424792,1428241..1428450,1430285..1430383,1434050..1434196,1434799..1434939,1436822..1436878,1437704..1437823,1438966..1439094,1440861..1440944,1441632..1441694,1444733..1444831,1445691..1445789,1446562..1446615,1447398..1447463,1451647..1451715,1460502..1460579,1462239..1462442,1468432..1468497,1471466..1471516)
location: region:1416667-1471516:1
so has part: feature:1416667-1416795:1:exon
so has part: feature:1424295-1424792:1:exon
so has part: feature:1428241-1428450:1:exon
so has part: feature:1430285-1430383:1:exon
so has part: feature:1434050-1434196:1:exon
so has part: feature:1434799-1434939:1:exon
so has part: feature:1436822-1436878:1:exon
so has part: feature:1437704-1437823:1:exon
so has part: feature:1438966-1439094:1:exon
so has part: feature:1440861-1440944:1:exon
so has part: feature:1441632-1441694:1:exon
so has part: feature:1444733-1444831:1:exon
so has part: feature:1445691-1445789:1:exon
so has part: feature:1446562-1446615:1:exon
so has part: feature:1447398-1447463:1:exon
so has part: feature:1451647-1451715:1:exon
so has part: feature:1460502-1460579:1:exon
so has part: feature:1462239-1462442:1:exon
so has part: feature:1468432-1468497:1:exon
so has part: feature:1471466-1471516:1:exon

XP_032741459.1
type: Protein
SIO_000068: ncbiprotein

position:1416667:1
position: 1416667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471516:1
position: 1471516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1416667-1416795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1424295-1424792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1428241-1428450:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1430285-1430383:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1434050-1434196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1434799-1434939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1436822-1436878:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1437704-1437823:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1438966-1439094:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1440861-1440944:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1441632-1441694:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1444733-1444831:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1445691-1445789:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1446562-1446615:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1447398-1447463:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1451647-1451715:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1460502-1460579:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1462239-1462442:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1468432-1468497:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1471466-1471516:1:exon

Jakmip2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Jakmip2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 2 isoform X1
translation: MSKKGRNKGEKPEALIVALQAANEDLRTKLTDIQIELHQEKSKVSKLEREKTQEAKRIRELEQRKHTVLVTELKAKLHEEKMKELQAVRENLIKQHEQEMSRTVKVRDGEIQRLKSALCALRDGSSDKVRTALTIEAREEARKQFDAERLKLLQEITDLKTAKKQVDEALSNMIQADKIKAGDLRSEHQSHQEAISKIKWESERDIRRLMDEIKAKDRIIFSLEKELETQTGYVQKLQLQKEALDEQLFLVKEAECNMSSPKREIPGRAGDGSEHCSSPDLRRNQKRIAELNATIRKLEDRNTLLGDERNELLKRVRETEKQCKPLLERNKCLAKRNDELMVSLQRMEEKLKAVTKENSEMREKITSHPPLKKLKSLNDLDQANEEQETEFLKLQVIEQQNIIDELTRDREKLIRRRKHRRSSKPIKRPVLDPFIGYDEDSMDSETSSMTSFRTDRTPATPDDDLDESLAAEESELRFRQLTKEYQALQRAYALLQEQTGGIIDAEREAKAQEQLQAEVLRYRAKIEDLEATLAQKGQDSHWVEDKQLFIKRNQELLEKIEKQEAENHRLQQELQDARDQNELLEFRNLELEERERRSPPFNLQIHPFSDGVSALQIYCMKEGVKDVNIPDLIKQLDILGDNGNLRNEEQVAIIQASTVLSLAEKWIQQIEGAEAALHQKMMELESDMEQFCKIKGYLEEELDYRKQALDQAYMRIQELEATLYNALQQETVIKFGELLSDKQQEELRTAVEKLRRQMLRKSREYDCQILQERMELLQQAHQRIRDLEDKTDIQKRQIKDLEEKFLFLFLFFSLAFILWP
SIO_010081: Jakmip2
subclass of: SO_0000673
so part of: Jakmip2
location: join(1416667..1416795,1424295..1424792,1428241..1428450,1430285..1430383,1434050..1434196,1434799..1434939,1436822..1436878,1437704..1437823,1438966..1439094,1440861..1440944,1441632..1441694,1444733..1444831,1445691..1445789,1446562..1446615,1447398..1447463,1451647..1451715,1460502..1460579,1462239..1462442,1468432..1468497,1471466..1471516)
location: region:1416667-1471516:1
so has part: feature:1416667-1416795:1:exon
so has part: feature:1424295-1424792:1:exon
so has part: feature:1428241-1428450:1:exon
so has part: feature:1430285-1430383:1:exon
so has part: feature:1434050-1434196:1:exon
so has part: feature:1434799-1434939:1:exon
so has part: feature:1436822-1436878:1:exon
so has part: feature:1437704-1437823:1:exon
so has part: feature:1438966-1439094:1:exon
so has part: feature:1440861-1440944:1:exon
so has part: feature:1441632-1441694:1:exon
so has part: feature:1444733-1444831:1:exon
so has part: feature:1445691-1445789:1:exon
so has part: feature:1446562-1446615:1:exon
so has part: feature:1447398-1447463:1:exon
so has part: feature:1451647-1451715:1:exon
so has part: feature:1460502-1460579:1:exon
so has part: feature:1462239-1462442:1:exon
so has part: feature:1468432-1468497:1:exon
so has part: feature:1471466-1471516:1:exon

XP_032741460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1416667-1416795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1424295-1424792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1428241-1428450:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1430285-1430383:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1434050-1434196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1434799-1434939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1436822-1436878:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1437704-1437823:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1438966-1439094:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1440861-1440944:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1441632-1441694:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1444733-1444831:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1445691-1445789:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1446562-1446615:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1447398-1447463:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1451647-1451715:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1460502-1460579:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1462239-1462442:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1468432-1468497:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1471466-1471516:1:exon

Jakmip2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Jakmip2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 2 isoform X2
translation: MSKKGRNKGEKPEALIVALQAANEDLRTKLTDIQIELHQEKSKVSKLEREKTQEAKRIRELEQRKHTVLVTELKAKLHEEKMKELQAVRENLIKQHEQEMSRTVKVRDGEIQRLKSALCALRDGSSDKVRTALTIEAREEARKQFDAERLKLLQEITDLKTAKKQVDEALSNMIQADKIKAGDLRSEHQSHQEAISKIKWESERDIRRLMDEIKAKDRIIFSLEKELETQTGYVQKLQLQKEALDEQLFLVKEAECNMSSPKREIPGRAGDGSEHCSSPDLRRNQKRIAELNATIRKLEDRNTLLGDERNELLKRVRETEKQCKPLLERNKCLAKRNDELMVSLQRMEEKLKAVTKENSEMREKITSHPPLKKLKSLNDLDQANEEQETEFLKLQVIEQQNIIDELTRDREKLIRRRKHRRSSKPIKRPVLDPFIGYDEDSMDSETSSMTSFRTDRTPATPDDDLDESLAAEESELRFRQLTKEYQALQRAYALLQEQTGGIIDAEREAKAQEQLQAEVLRYRAKIEDLEATLAQKGQIEKQEAENHRLQQELQDARDQNELLEFRNLELEERERRSPPFNLQIHPFSDGVSALQIYCMKEGVKDVNIPDLIKQLDILGDNGNLRNEEQVAIIQASTVLSLAEKWIQQIEGAEAALHQKMMELESDMEQFCKIKGYLEEELDYRKQALDQAYMRIQELEATLYNALQQETVIKFGELLSDKQQEELRTAVEKLRRQMLRKSREYDCQILQERMELLQQAHQRIRDLEDKTDIQKRQIKDLEEKFLFLFLFFSLAFILWP
SIO_010081: Jakmip2
subclass of: SO_0000673
so part of: Jakmip2
location: join(1416667..1416795,1424295..1424792,1428241..1428450,1430285..1430383,1434050..1434196,1434799..1434939,1436822..1436878,1437704..1437823,1438966..1439094,1440861..1440944,1444733..1444831,1445691..1445789,1446562..1446615,1447398..1447463,1451647..1451715,1460502..1460579,1462239..1462442,1468432..1468497,1471466..1471516)
location: region:1416667-1471516:1
so has part: feature:1416667-1416795:1:exon
so has part: feature:1424295-1424792:1:exon
so has part: feature:1428241-1428450:1:exon
so has part: feature:1430285-1430383:1:exon
so has part: feature:1434050-1434196:1:exon
so has part: feature:1434799-1434939:1:exon
so has part: feature:1436822-1436878:1:exon
so has part: feature:1437704-1437823:1:exon
so has part: feature:1438966-1439094:1:exon
so has part: feature:1440861-1440944:1:exon
so has part: feature:1444733-1444831:1:exon
so has part: feature:1445691-1445789:1:exon
so has part: feature:1446562-1446615:1:exon
so has part: feature:1447398-1447463:1:exon
so has part: feature:1451647-1451715:1:exon
so has part: feature:1460502-1460579:1:exon
so has part: feature:1462239-1462442:1:exon
so has part: feature:1468432-1468497:1:exon
so has part: feature:1471466-1471516:1:exon

XP_032741461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1416667-1416795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1424295-1424792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1428241-1428450:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1430285-1430383:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1434050-1434196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1434799-1434939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1436822-1436878:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1437704-1437823:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1438966-1439094:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1440861-1440944:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1444733-1444831:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1445691-1445789:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1446562-1446615:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1447398-1447463:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1451647-1451715:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1460502-1460579:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1462239-1462442:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1468432-1468497:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1471466-1471516:1:exon

Dpysl3
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Dpysl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1617667..1680326
location: region:1617667-1680326:1
so has part: feature:1617667-1680326:1:exon
subclass of: SO_0000010

116884916
type: Gene
SIO_000068: ncbigene

position:1617667:1
position: 1617667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1680326:1
position: 1680326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1617667-1680326:1:exon

Dpysl3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Dpysl3
product: dihydropyrimidinase like 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 104 ESTs, 36 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032886139.1
SIO_010081: Dpysl3
subclass of: SO_0000673
so part of: Dpysl3
location: join(1617667..1617869,1646158..1646246,1648651..1648835,1651365..1651529,1655030..1655091,1655885..1655965,1663477..1663545,1666259..1666379,1668786..1668942,1669793..1669934,1671922..1672092,1673269..1673448,1675305..1675467,1676777..1680326)
location: region:1617667-1680326:1
so has part: feature:1617667-1617869:1:exon
so has part: feature:1646158-1646246:1:exon
so has part: feature:1648651-1648835:1:exon
so has part: feature:1651365-1651529:1:exon
so has part: feature:1655030-1655091:1:exon
so has part: feature:1655885-1655965:1:exon
so has part: feature:1663477-1663545:1:exon
so has part: feature:1666259-1666379:1:exon
so has part: feature:1668786-1668942:1:exon
so has part: feature:1669793-1669934:1:exon
so has part: feature:1671922-1672092:1:exon
so has part: feature:1673269-1673448:1:exon
so has part: feature:1675305-1675467:1:exon
so has part: feature:1676777-1680326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1617667-1617869:1:exon

position:1617869:1
position: 1617869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1646158-1646246:1:exon

position:1646158:1
position: 1646158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1646246:1
position: 1646246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1648651-1648835:1:exon

position:1648651:1
position: 1648651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648835:1
position: 1648835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1651365-1651529:1:exon

position:1651365:1
position: 1651365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1651529:1
position: 1651529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1655030-1655091:1:exon

position:1655030:1
position: 1655030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1655091:1
position: 1655091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1655885-1655965:1:exon

position:1655885:1
position: 1655885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1655965:1
position: 1655965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1663477-1663545:1:exon

position:1663477:1
position: 1663477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1663545:1
position: 1663545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1666259-1666379:1:exon

position:1666259:1
position: 1666259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666379:1
position: 1666379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1668786-1668942:1:exon

position:1668786:1
position: 1668786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668942:1
position: 1668942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1669793-1669934:1:exon

position:1669793:1
position: 1669793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1669934:1
position: 1669934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1671922-1672092:1:exon

position:1671922:1
position: 1671922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1672092:1
position: 1672092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1673269-1673448:1:exon

position:1673269:1
position: 1673269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1673448:1
position: 1673448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1675305-1675467:1:exon

position:1675305:1
position: 1675305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1675467:1
position: 1675467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1676777-1680326:1:exon

position:1676777:1
position: 1676777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Dpysl3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Dpysl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydropyrimidinase-related protein 3
translation: MSYQGKKNIPRITSDRLLIKGGRIVNDDQSFYADIYMEDGLIKQIGDNLIVPGGVKTIEANGKMVMPGGIDVHTHFQMPYKGMTTVDDFFQGTKAALAGGTTMIIDHVVPEPESSLTEAYEKWREWADGKSCCDYALHVDITHWNDSVKQEVQNLSKEKGVNSFMVYMAYKDLYQVSNTELYEIFTCLGELGAIAQVHAENGDIIAQEQARMLEMGITGPEGHVLSRPEELEAEAVFRAITVASQTNCPLYVTKVMSKSAADLISQARKKGNVVFGEPITASLGIDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYINSLLASGDLQLSGSAHCTFSTAQKAIGKDNFTAIPEGTNGVEERMSVIWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDSDLVIWDPDAVKIVSAKNHQSVAEYNIFEGMELRGAPLVVICQGKIMLEDGNLHVTQGAGRFIPCSPFSDYVYKRIKARRKMADLHAVPRGMYDGPVFDLTTTPKGGTPAGSTRGSPTRPNPPVRNLHQSGFSLSGTQVDEGVRSASKRIVAPPGGRSNITSLS
SIO_010081: Dpysl3
subclass of: SO_0000673
so part of: Dpysl3
location: join(1617831..1617869,1646158..1646246,1648651..1648835,1651365..1651529,1655030..1655091,1655885..1655965,1663477..1663545,1666259..1666379,1668786..1668942,1669793..1669934,1671922..1672092,1673269..1673448,1675305..1675467,1676777..1676865)
location: region:1617831-1676865:1
so has part: feature:1617831-1617869:1:exon
so has part: feature:1646158-1646246:1:exon
so has part: feature:1648651-1648835:1:exon
so has part: feature:1651365-1651529:1:exon
so has part: feature:1655030-1655091:1:exon
so has part: feature:1655885-1655965:1:exon
so has part: feature:1663477-1663545:1:exon
so has part: feature:1666259-1666379:1:exon
so has part: feature:1668786-1668942:1:exon
so has part: feature:1669793-1669934:1:exon
so has part: feature:1671922-1672092:1:exon
so has part: feature:1673269-1673448:1:exon
so has part: feature:1675305-1675467:1:exon
so has part: feature:1676777-1676865:1:exon

XP_032742030.1
type: Protein
SIO_000068: ncbiprotein

position:1617831:1
position: 1617831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1676865:1
position: 1676865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1617831-1617869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1646158-1646246:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1648651-1648835:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1651365-1651529:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655030-1655091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1655885-1655965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1663477-1663545:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1666259-1666379:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1668786-1668942:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1669793-1669934:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1671922-1672092:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1673269-1673448:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1675305-1675467:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1676777-1676865:1:exon

Stk32a
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Stk32a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1685951..1794892)
location: region:1685951-1794892:-1
so has part: feature:1685951-1794892:-1:exon
subclass of: SO_0000010

116884746
type: Gene
SIO_000068: ncbigene

position:1685951:-1
position: 1685951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1794892:-1
position: 1794892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1685951-1794892:-1:exon

Stk32a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Stk32a
product: serine/threonine kinase 32A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032885965.1
SIO_010081: Stk32a
subclass of: SO_0000673
so part of: Stk32a
location: complement(join(1685951..1686303,1687050..1687114,1687727..1687855,1689302..1689427,1690783..1690899,1696495..1696592,1704625..1704714,1712828..1712865,1739855..1740028,1762134..1762285,1763243..1763298,1794746..1794892))
location: region:1685951-1794892:-1
so has part: feature:1794746-1794892:-1:exon
so has part: feature:1763243-1763298:-1:exon
so has part: feature:1762134-1762285:-1:exon
so has part: feature:1739855-1740028:-1:exon
so has part: feature:1712828-1712865:-1:exon
so has part: feature:1704625-1704714:-1:exon
so has part: feature:1696495-1696592:-1:exon
so has part: feature:1690783-1690899:-1:exon
so has part: feature:1689302-1689427:-1:exon
so has part: feature:1687727-1687855:-1:exon
so has part: feature:1687050-1687114:-1:exon
so has part: feature:1685951-1686303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1794746-1794892:-1:exon

position:1794746:-1
position: 1794746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1763243-1763298:-1:exon

position:1763243:-1
position: 1763243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1763298:-1
position: 1763298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1762134-1762285:-1:exon

position:1762134:-1
position: 1762134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1762285:-1
position: 1762285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1739855-1740028:-1:exon

position:1739855:-1
position: 1739855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1740028:-1
position: 1740028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1712828-1712865:-1:exon

position:1712828:-1
position: 1712828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1712865:-1
position: 1712865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1704625-1704714:-1:exon

position:1704625:-1
position: 1704625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1704714:-1
position: 1704714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1696495-1696592:-1:exon

position:1696495:-1
position: 1696495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1696592:-1
position: 1696592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1690783-1690899:-1:exon

position:1690783:-1
position: 1690783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1690899:-1
position: 1690899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1689302-1689427:-1:exon

position:1689302:-1
position: 1689302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1689427:-1
position: 1689427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1687727-1687855:-1:exon

position:1687727:-1
position: 1687727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1687855:-1
position: 1687855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1687050-1687114:-1:exon

position:1687050:-1
position: 1687050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1687114:-1
position: 1687114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1685951-1686303:-1:exon

position:1686303:-1
position: 1686303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Stk32a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Stk32a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 32A
translation: MGANTSSKAPVFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFQEDTVKLFICELAMALDYLQSQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPKETRITTVAGTKPYMAPEMFSARKESGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVNMFETAIVTYPSAWSPEMVSLLKKLLEPNPDQRFSHLTDIQNFPYMSDMNWDAVLQKRLIPGFVPTKGRLNCDPTFELEEMILESKPLHKKKKRLAKKEKEMKKCDSPQMCLLQEHLDAVQKEFIIFNREKVKRDFNQRQANLALEQTKNNTEEEDGQNNNL
SIO_010081: Stk32a
subclass of: SO_0000673
so part of: Stk32a
location: complement(join(1686207..1686303,1687050..1687114,1687727..1687855,1689302..1689427,1690783..1690899,1696495..1696592,1704625..1704714,1712828..1712865,1739855..1740028,1762134..1762285,1763243..1763298,1794746..1794797))
location: region:1686207-1794797:-1
so has part: feature:1794746-1794797:-1:exon
so has part: feature:1763243-1763298:-1:exon
so has part: feature:1762134-1762285:-1:exon
so has part: feature:1739855-1740028:-1:exon
so has part: feature:1712828-1712865:-1:exon
so has part: feature:1704625-1704714:-1:exon
so has part: feature:1696495-1696592:-1:exon
so has part: feature:1690783-1690899:-1:exon
so has part: feature:1689302-1689427:-1:exon
so has part: feature:1687727-1687855:-1:exon
so has part: feature:1687050-1687114:-1:exon
so has part: feature:1686207-1686303:-1:exon

XP_032741856.1
type: Protein
SIO_000068: ncbiprotein

position:1686207:-1
position: 1686207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1794797:-1
position: 1794797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1794746-1794797:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763243-1763298:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1762134-1762285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1739855-1740028:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1712828-1712865:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1704625-1704714:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1696495-1696592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1690783-1690899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1689302-1689427:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1687727-1687855:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1687050-1687114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1686207-1686303:-1:exon

LOC116885081
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116885081
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1952467..1952573
location: region:1952467-1952573:1
so has part: feature:1952467-1952573:1:exon
subclass of: SO_0000623

116885081
type: Gene
SIO_000068: ncbigene

position:1952467:1
position: 1952467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1952573:1
position: 1952573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1952467-1952573:1:exon

LOC116885081
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10117
nc RNA class: snRNA
gene: LOC116885081
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004385954.1
SIO_010081: LOC116885081
subclass of: SO_0000673
so part of: LOC116885081
location: 1952467..1952573
location: region:1952467-1952573:1
so has part: feature:1952467-1952573:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1952467-1952573:1:exon

Ppp2r2b
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Ppp2r2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2189174..>2292650)
location: region:2189174-2292650:-1
so has part: feature:2189174-2292650:-1:exon
subclass of: SO_0000010

116884783
type: Gene
SIO_000068: ncbigene

position:2189174:-1
position: 2189174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2292650:-1
position: 2292650
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2189174-2292650:-1:exon

Ppp2r2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Ppp2r2b
product: protein phosphatase 2 regulatory subunit Bbeta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 45 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886016.1
SIO_010081: Ppp2r2b
subclass of: SO_0000673
so part of: Ppp2r2b
location: complement(join(2189174..2189950,2192348..2192439,2210972..2211141,2237937..2238101,2251555..2251732,2282436..2282548,2289274..2289439,2292528..>2292650))
location: region:2189174-2292650:-1
so has part: feature:2292528-2292650:-1:exon
so has part: feature:2289274-2289439:-1:exon
so has part: feature:2282436-2282548:-1:exon
so has part: feature:2251555-2251732:-1:exon
so has part: feature:2237937-2238101:-1:exon
so has part: feature:2210972-2211141:-1:exon
so has part: feature:2192348-2192439:-1:exon
so has part: feature:2189174-2189950:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2292528-2292650:-1:exon

position:2292528:-1
position: 2292528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2289274-2289439:-1:exon

position:2289274:-1
position: 2289274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2289439:-1
position: 2289439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2282436-2282548:-1:exon

position:2282436:-1
position: 2282436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2282548:-1
position: 2282548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2251555-2251732:-1:exon

position:2251555:-1
position: 2251555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2251732:-1
position: 2251732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2237937-2238101:-1:exon

position:2237937:-1
position: 2237937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2238101:-1
position: 2238101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2210972-2211141:-1:exon

position:2210972:-1
position: 2210972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2211141:-1
position: 2211141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2192348-2192439:-1:exon

position:2192348:-1
position: 2192348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2192439:-1
position: 2192439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2189174-2189950:-1:exon

position:2189950:-1
position: 2189950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ppp2r2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Ppp2r2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
translation: IAFVFFLSADIISTVEFNHTGELLATGDKGGRVVIFQREQESKNQVHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEEGRLRDPATITTLRVPVLRPMDLMVEATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFNIVDIKPANMEELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRASALCDRHTKFFEEPEDPSNRSFFSEIISSISDVKFSHSGRYIMTRDYLTAKVWDLNMENRPVETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILHTAWHPSENIIAVAATNNLYIFQDKVN
SIO_010081: Ppp2r2b
subclass of: SO_0000673
so part of: Ppp2r2b
location: complement(join(2189671..2189950,2192348..2192439,2210972..2211141,2237937..2238101,2251555..2251732,2282436..2282548,2289274..2289439,2292528..>2292650))
location: region:2189671-2292650:-1
so has part: feature:2292528-2292650:-1:exon
so has part: feature:2289274-2289439:-1:exon
so has part: feature:2282436-2282548:-1:exon
so has part: feature:2251555-2251732:-1:exon
so has part: feature:2237937-2238101:-1:exon
so has part: feature:2210972-2211141:-1:exon
so has part: feature:2192348-2192439:-1:exon
so has part: feature:2189671-2189950:-1:exon

XP_032741907.1
type: Protein
SIO_000068: ncbiprotein

position:2189671:-1
position: 2189671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2292528-2292650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2289274-2289439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2282436-2282548:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2251555-2251732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2237937-2238101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2210972-2211141:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2192348-2192439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2189671-2189950:-1:exon

LOC116885051
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116885051
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(2325927..2326035)
location: region:2325927-2326035:-1
so has part: feature:2325927-2326035:-1:exon

116885051
type: Gene
SIO_000068: ncbigene

position:2325927:-1
position: 2325927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2326035:-1
position: 2326035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2325927-2326035:-1:exon

LOC116885051
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116885051
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116885051
subclass of: SO_0000673
so part of: LOC116885051
location: complement(2325927..2326035)
location: region:2325927-2326035:-1
so has part: feature:2325927-2326035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2325927-2326035:-1:exon

LOC116884804
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2471396..2471709)
location: region:2471396-2471709:-1
so has part: feature:2471396-2471709:-1:exon

116884804
type: Gene
SIO_000068: ncbigene

position:2471396:-1
position: 2471396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2471709:-1
position: 2471709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2471396-2471709:-1:exon

LOC116884804
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884804
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins
pseudo: true
SIO_010081: LOC116884804
subclass of: SO_0000673
so part of: LOC116884804
location: complement(2471396..2471709)
location: region:2471396-2471709:-1
so has part: feature:2471396-2471709:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2471396-2471709:-1:exon

LOC116884693
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884693
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2676321..2677225
location: region:2676321-2677225:1
so has part: feature:2676321-2677225:1:exon

116884693
type: Gene
SIO_000068: ncbigene

position:2676321:1
position: 2676321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2677225:1
position: 2677225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2676321-2677225:1:exon

LOC116884693
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884693
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins
pseudo: true
SIO_010081: LOC116884693
subclass of: SO_0000673
so part of: LOC116884693
location: 2676321..2677225
location: region:2676321-2677225:1
so has part: feature:2676321-2677225:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2676321-2677225:1:exon

LOC116884898
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2715448..2717615)
location: region:2715448-2717615:-1
so has part: feature:2715448-2717615:-1:exon

116884898
type: Gene
SIO_000068: ncbigene

position:2715448:-1
position: 2715448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2717615:-1
position: 2717615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2715448-2717615:-1:exon

LOC116884898
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884898
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116884898
subclass of: SO_0000673
so part of: LOC116884898
location: complement(2715448..2716470)
location: region:2715448-2716470:-1
so has part: feature:2715448-2716470:-1:exon

position:2716470:-1
position: 2716470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2715448-2716470:-1:exon

LOC116884898
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884898
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116884898
subclass of: SO_0000673
so part of: LOC116884898
location: complement(2717570..2717615)
location: region:2717570-2717615:-1
so has part: feature:2717570-2717615:-1:exon

position:2717570:-1
position: 2717570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2717570-2717615:-1:exon

LOC116884553
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884553
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2962510..2963073
location: region:2962510-2963073:1
so has part: feature:2962510-2963073:1:exon

116884553
type: Gene
SIO_000068: ncbigene

position:2962510:1
position: 2962510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2963073:1
position: 2963073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2962510-2963073:1:exon

LOC116884553
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884553
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 16 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116884553
subclass of: SO_0000673
so part of: LOC116884553
location: 2962510..2963073
location: region:2962510-2963073:1
so has part: feature:2962510-2963073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2962510-2963073:1:exon

LOC116884255
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3008999..3009308
location: region:3008999-3009308:1
so has part: feature:3008999-3009308:1:exon

116884255
type: Gene
SIO_000068: ncbigene

position:3008999:1
position: 3008999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3009308:1
position: 3009308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3008999-3009308:1:exon

LOC116884255
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884255
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116884255
subclass of: SO_0000673
so part of: LOC116884255
location: 3008999..3009308
location: region:3008999-3009308:1
so has part: feature:3008999-3009308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3008999-3009308:1:exon

LOC116884899
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884899
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3025898..3027765
location: region:3025898-3027765:1
so has part: feature:3025898-3027765:1:exon

116884899
type: Gene
SIO_000068: ncbigene

position:3025898:1
position: 3025898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3027765:1
position: 3027765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3025898-3027765:1:exon

LOC116884899
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884899
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116884899
subclass of: SO_0000673
so part of: LOC116884899
location: 3025898..3027765
location: region:3025898-3027765:1
so has part: feature:3025898-3027765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3025898-3027765:1:exon

Prelid2
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Prelid2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3055798..3136262)
location: region:3055798-3136262:-1
so has part: feature:3055798-3136262:-1:exon
subclass of: SO_0000010

116884723
type: Gene
SIO_000068: ncbigene

position:3055798:-1
position: 3055798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3136262:-1
position: 3136262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3055798-3136262:-1:exon

Prelid2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Prelid2
product: PRELI domain containing 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885910.1
SIO_010081: Prelid2
subclass of: SO_0000673
so part of: Prelid2
location: complement(join(3055798..3058240,3062649..3062718,3095533..3095638,3118064..3118223,3120484..3120557,3122936..3122993,3136048..3136262))
location: region:3055798-3136262:-1
so has part: feature:3136048-3136262:-1:exon
so has part: feature:3122936-3122993:-1:exon
so has part: feature:3120484-3120557:-1:exon
so has part: feature:3118064-3118223:-1:exon
so has part: feature:3095533-3095638:-1:exon
so has part: feature:3062649-3062718:-1:exon
so has part: feature:3055798-3058240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3136048-3136262:-1:exon

position:3136048:-1
position: 3136048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3122936-3122993:-1:exon

position:3122936:-1
position: 3122936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3122993:-1
position: 3122993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3120484-3120557:-1:exon

position:3120484:-1
position: 3120484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3120557:-1
position: 3120557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3118064-3118223:-1:exon

position:3118064:-1
position: 3118064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3118223:-1
position: 3118223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3095533-3095638:-1:exon

position:3095533:-1
position: 3095533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3095638:-1
position: 3095638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3062649-3062718:-1:exon

position:3062649:-1
position: 3062649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3062718:-1
position: 3062718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3055798-3058240:-1:exon

position:3058240:-1
position: 3058240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Prelid2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Prelid2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: PRELI domain-containing protein 2
translation: MGVTVDVHQVFQYPFEQVVACFLRKYPNPMDKNVISVKTVEEKKDESTGLIYRKRIAICQNVVPEVLRKVSILKVPDIQLEEESWLSLQKRNMAIRSHCLTWTQYASMREESVFRESXRNPNWTEFVQTGRISITGAGFLNCILETFASTFLRQGAQKGIRIMEMLLKEQCGSPLAE
SIO_010081: Prelid2
subclass of: SO_0000673
so part of: Prelid2
location: complement(join(3062659..3062718,3095533..3095638,3118064..3118223,3120484..3120557,3122936..3122993,3136048..3136122))
location: region:3062659-3136122:-1
so has part: feature:3136048-3136122:-1:exon
so has part: feature:3122936-3122993:-1:exon
so has part: feature:3120484-3120557:-1:exon
so has part: feature:3118064-3118223:-1:exon
so has part: feature:3095533-3095638:-1:exon
so has part: feature:3062659-3062718:-1:exon

XP_032741801.1
type: Protein
SIO_000068: ncbiprotein

position:3062659:-1
position: 3062659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3136122:-1
position: 3136122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3136048-3136122:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3122936-3122993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3120484-3120557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3118064-3118223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3095533-3095638:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3062659-3062718:-1:exon

LOC116884540
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3081195..3082058)
location: region:3081195-3082058:-1
so has part: feature:3081195-3082058:-1:exon

116884540
type: Gene
SIO_000068: ncbigene

position:3081195:-1
position: 3081195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3082058:-1
position: 3082058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3081195-3082058:-1:exon

LOC116884540
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884540
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116884540
subclass of: SO_0000673
so part of: LOC116884540
location: complement(3081195..3081624)
location: region:3081195-3081624:-1
so has part: feature:3081195-3081624:-1:exon

position:3081624:-1
position: 3081624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3081195-3081624:-1:exon

LOC116884540
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884540
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116884540
subclass of: SO_0000673
so part of: LOC116884540
location: complement(3081788..3082058)
location: region:3081788-3082058:-1
so has part: feature:3081788-3082058:-1:exon

position:3081788:-1
position: 3081788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3081788-3082058:-1:exon

Grxcr2
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Grxcr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3164544..3178080)
location: region:3164544-3178080:-1
so has part: feature:3164544-3178080:-1:exon
subclass of: SO_0000010

116884631
type: Gene
SIO_000068: ncbigene

position:3164544:-1
position: 3164544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3178080:-1
position: 3178080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3164544-3178080:-1:exon

Grxcr2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Grxcr2
product: glutaredoxin and cysteine rich domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885772.1
SIO_010081: Grxcr2
subclass of: SO_0000673
so part of: Grxcr2
location: complement(join(3164544..3165144,3170328..3170555,3177745..3178080))
location: region:3164544-3178080:-1
so has part: feature:3177745-3178080:-1:exon
so has part: feature:3170328-3170555:-1:exon
so has part: feature:3164544-3165144:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3177745-3178080:-1:exon

position:3177745:-1
position: 3177745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3170328-3170555:-1:exon

position:3170328:-1
position: 3170328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3170555:-1
position: 3170555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3164544-3165144:-1:exon

position:3165144:-1
position: 3165144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Grxcr2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Grxcr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutaredoxin domain-containing cysteine-rich protein 2
translation: MENSEKKLNQKSDDKPRKVRFKISSSYSGRVLKQVFEDGQELESPKEEYPHSFLQEALEPMDGVYGSGEAPKPQLYSPKLTAQRISVFRDSGAYTLAGSQPLFNDYKANDHKPPPIIDFGKIIIYTNNLKIIRTPMDKRDFMRKILQKEEVAEEESLMITGENDGDREQSGSPLPETDRTFLHSQHTQDGLVPEDNCLHCQGSGIATCSLCHGSKFSMLANRFKESYRALRCPACNENGLQPCRICSP
SIO_010081: Grxcr2
subclass of: SO_0000673
so part of: Grxcr2
location: complement(join(3164962..3165144,3170328..3170555,3177745..3178080))
location: region:3164962-3178080:-1
so has part: feature:3177745-3178080:-1:exon
so has part: feature:3170328-3170555:-1:exon
so has part: feature:3164962-3165144:-1:exon

XP_032741663.1
type: Protein
SIO_000068: ncbiprotein

position:3164962:-1
position: 3164962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3177745-3178080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3170328-3170555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3164962-3165144:-1:exon

LOC116884801
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884801
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3221234..3222814)
location: region:3221234-3222814:-1
so has part: feature:3221234-3222814:-1:exon

116884801
type: Gene
SIO_000068: ncbigene

position:3221234:-1
position: 3221234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3222814:-1
position: 3222814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3221234-3222814:-1:exon

LOC116884801
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884801
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC116884801
subclass of: SO_0000673
so part of: LOC116884801
location: complement(3221234..3222078)
location: region:3221234-3222078:-1
so has part: feature:3221234-3222078:-1:exon

position:3222078:-1
position: 3222078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3221234-3222078:-1:exon

LOC116884801
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884801
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC116884801
subclass of: SO_0000673
so part of: LOC116884801
location: complement(3222115..3222814)
location: region:3222115-3222814:-1
so has part: feature:3222115-3222814:-1:exon

position:3222115:-1
position: 3222115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3222115-3222814:-1:exon

Sh3rf2
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Sh3rf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3227129..3332798
location: region:3227129-3332798:1
so has part: feature:3227129-3332798:1:exon
subclass of: SO_0000010

116884688
type: Gene
SIO_000068: ncbigene

position:3227129:1
position: 3227129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3332798:1
position: 3332798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3227129-3332798:1:exon

Sh3rf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Sh3rf2
product: SH3 domain containing ring finger 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032885871.1
SIO_010081: Sh3rf2
subclass of: SO_0000673
so part of: Sh3rf2
location: join(3227129..3227658,3274065..3274334,3276769..3276864,3283542..3283865,3317324..3317415,3318781..3318951,3326287..3326528,3329402..3329760,3332452..3332798)
location: region:3227129-3332798:1
so has part: feature:3227129-3227658:1:exon
so has part: feature:3274065-3274334:1:exon
so has part: feature:3276769-3276864:1:exon
so has part: feature:3283542-3283865:1:exon
so has part: feature:3317324-3317415:1:exon
so has part: feature:3318781-3318951:1:exon
so has part: feature:3326287-3326528:1:exon
so has part: feature:3329402-3329760:1:exon
so has part: feature:3332452-3332798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3227129-3227658:1:exon

position:3227658:1
position: 3227658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3274065-3274334:1:exon

position:3274065:1
position: 3274065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3274334:1
position: 3274334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3276769-3276864:1:exon

position:3276769:1
position: 3276769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3276864:1
position: 3276864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3283542-3283865:1:exon

position:3283542:1
position: 3283542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3283865:1
position: 3283865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3317324-3317415:1:exon

position:3317324:1
position: 3317324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3317415:1
position: 3317415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3318781-3318951:1:exon

position:3318781:1
position: 3318781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3318951:1
position: 3318951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3326287-3326528:1:exon

position:3326287:1
position: 3326287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3326528:1
position: 3326528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3329402-3329760:1:exon

position:3329402:1
position: 3329402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3329760:1
position: 3329760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3332452-3332798:1:exon

position:3332452:1
position: 3332452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sh3rf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Sh3rf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SH3RF2
translation: MDDLTLLDLLECPVCFEKLDVTAKVLPCQHTFCKPCLQRIFKAHKELRCPECRTLVFCSIEALPANLLLVRLLDGVRSGHNSWRGGSFRRPRILTLQDNRKAKSSPRSLQASPFRLGPTVRIHMDGVPRAKALCNYRGKNPGDLKFNKGDVILLRRQLDENWYQGEINGVSGFFPASSVEVIKQLPQPPPLCRALYNFDLRDKDKSENQDCLTFLKDDVITVISRVDENWAEGKLGDKVGIFPILFVEPNLSARHLLEKSKGHQLSRTKHLSLMSSPSRGKATNTSTLRKSPGSRRKGSGQFAMTTALNTLNRMVHSPEGHQMVEIRTPVLISSTSPSMLTQHGDRADFPASSAGQVSTSHPAPASPGHSTAMVSVPSSQQHLSTNMFVALHTYSAQGPEELDLKKGEGIRVLGKHQDGWLRGVSLVTGRTGVFPSDYVIPVFSSTARKTSSFPDSRNPTVCTTWALSTSSVSSQGSFSEGDPRQSGPFKSVFVPTAVNPPRSTPGPGTSGQGSLRKVRSSMRKNGSLQRPVQSGIPTFMVGSLRCSPGMVIRPQKFQFYQPQGMTPSPTPIMVEIGSKSISTGEPVLTCINRGGKTRTHSAGNSIIMEGKETPIKSEPPPKPPVSAPPSILVKPENSKNGIEKQVKTVRFQNYSPPPTKHSASGPTSGKHELPATLKGSQPEAVSSEGEMTILFAHRSGCHSGQQTDLRRKSAFSKTTPPVSTASVSQTLFPTK
SIO_010081: Sh3rf2
subclass of: SO_0000673
so part of: Sh3rf2
location: join(3227281..3227658,3274065..3274334,3276769..3276864,3283542..3283865,3317324..3317415,3318781..3318951,3326287..3326528,3329402..3329760,3332452..3332727)
location: region:3227281-3332727:1
so has part: feature:3227281-3227658:1:exon
so has part: feature:3274065-3274334:1:exon
so has part: feature:3276769-3276864:1:exon
so has part: feature:3283542-3283865:1:exon
so has part: feature:3317324-3317415:1:exon
so has part: feature:3318781-3318951:1:exon
so has part: feature:3326287-3326528:1:exon
so has part: feature:3329402-3329760:1:exon
so has part: feature:3332452-3332727:1:exon

XP_032741762.1
type: Protein
SIO_000068: ncbiprotein

position:3227281:1
position: 3227281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3332727:1
position: 3332727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3227281-3227658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3274065-3274334:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3276769-3276864:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3283542-3283865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3317324-3317415:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3318781-3318951:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3326287-3326528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3329402-3329760:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3332452-3332727:1:exon

LOC116884689
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884689
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3243509..3243704
location: region:3243509-3243704:1
so has part: feature:3243509-3243704:1:exon

116884689
type: Gene
SIO_000068: ncbigene

position:3243509:1
position: 3243509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3243704:1
position: 3243704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3243509-3243704:1:exon

LOC116884689
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884689
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116884689
subclass of: SO_0000673
so part of: LOC116884689
location: 3243509..3243704
location: region:3243509-3243704:1
so has part: feature:3243509-3243704:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3243509-3243704:1:exon

Plac8l1
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Plac8l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3354913..3371797)
location: region:3354913-3371797:-1
so has part: feature:3354913-3371797:-1:exon
subclass of: SO_0000010

116884806
type: Gene
SIO_000068: ncbigene

position:3354913:-1
position: 3354913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3371797:-1
position: 3371797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3354913-3371797:-1:exon

Plac8l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Plac8l1
product: PLAC8 like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886038.1
SIO_010081: Plac8l1
subclass of: SO_0000673
so part of: Plac8l1
location: complement(join(3354913..3355148,3356397..3356533,3364642..3364778,3371555..3371797))
location: region:3354913-3371797:-1
so has part: feature:3371555-3371797:-1:exon
so has part: feature:3364642-3364778:-1:exon
so has part: feature:3356397-3356533:-1:exon
so has part: feature:3354913-3355148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3371555-3371797:-1:exon

position:3371555:-1
position: 3371555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3364642-3364778:-1:exon

position:3364642:-1
position: 3364642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3364778:-1
position: 3364778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3356397-3356533:-1:exon

position:3356397:-1
position: 3356397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3356533:-1
position: 3356533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3354913-3355148:-1:exon

position:3355148:-1
position: 3355148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Plac8l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Plac8l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PLAC8-like protein 1
translation: MSWLGHHFSRWCEDISLLSTHIPLFSPMPSEDEHLISDLRSHVPAHVVVKQPIRGASGRTTVTAIVQTGGDWSTGLFSVCRDRKICFWGLFCPMCLECDIARHYGECLCWPLLPGSSFALRIGTRERHKIQGTLCEDWVMVHCCWPFSICQVARELKMRTSQLYEICEVPELKDTLV
SIO_010081: Plac8l1
subclass of: SO_0000673
so part of: Plac8l1
location: complement(join(3355008..3355148,3356397..3356533,3364642..3364778,3371555..3371673))
location: region:3355008-3371673:-1
so has part: feature:3371555-3371673:-1:exon
so has part: feature:3364642-3364778:-1:exon
so has part: feature:3356397-3356533:-1:exon
so has part: feature:3355008-3355148:-1:exon

XP_032741929.1
type: Protein
SIO_000068: ncbiprotein

position:3355008:-1
position: 3355008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3371673:-1
position: 3371673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3371555-3371673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3364642-3364778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3356397-3356533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3355008-3355148:-1:exon

LOC116884805
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3359457..3360325)
location: region:3359457-3360325:-1
so has part: feature:3359457-3360325:-1:exon

116884805
type: Gene
SIO_000068: ncbigene

position:3359457:-1
position: 3359457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3360325:-1
position: 3360325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3359457-3360325:-1:exon

LOC116884805
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884805
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116884805
subclass of: SO_0000673
so part of: LOC116884805
location: complement(3359457..3360325)
location: region:3359457-3360325:-1
so has part: feature:3359457-3360325:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3359457-3360325:-1:exon

Lars1
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Lars1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3382335..3430686)
location: region:3382335-3430686:-1
so has part: feature:3382335-3430686:-1:exon
subclass of: SO_0000010

116884300
type: Gene
SIO_000068: ncbigene

position:3382335:-1
position: 3382335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3430686:-1
position: 3430686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3382335-3430686:-1:exon

Lars1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Lars1
product: leucyl-tRNA synthetase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885400.1
SIO_010081: Lars1
subclass of: SO_0000673
so part of: Lars1
location: complement(join(3382335..3382706,3389113..3389245,3390253..3390348,3391844..3391948,3394265..3394375,3396263..3396373,3396771..3396911,3397794..3397934,3399111..3399201,3400745..3400928,3404991..3405054,3406551..3406608,3407374..3407586,3407983..3408121,3408961..3409043,3409121..3409186,3409272..3409357,3412115..3412192,3412880..3413020,3413737..3413790,3414788..3414864,3414942..3415029,3417474..3417699,3417949..3418016,3418212..3418275,3419114..3419226,3420243..3420404,3421911..3422048,3425632..3425712,3426199..3426286,3430562..3430686))
location: region:3382335-3430686:-1
so has part: feature:3430562-3430686:-1:exon
so has part: feature:3426199-3426286:-1:exon
so has part: feature:3425632-3425712:-1:exon
so has part: feature:3421911-3422048:-1:exon
so has part: feature:3420243-3420404:-1:exon
so has part: feature:3419114-3419226:-1:exon
so has part: feature:3418212-3418275:-1:exon
so has part: feature:3417949-3418016:-1:exon
so has part: feature:3417474-3417699:-1:exon
so has part: feature:3414942-3415029:-1:exon
so has part: feature:3414788-3414864:-1:exon
so has part: feature:3413737-3413790:-1:exon
so has part: feature:3412880-3413020:-1:exon
so has part: feature:3412115-3412192:-1:exon
so has part: feature:3409272-3409357:-1:exon
so has part: feature:3409121-3409186:-1:exon
so has part: feature:3408961-3409043:-1:exon
so has part: feature:3407983-3408121:-1:exon
so has part: feature:3407374-3407586:-1:exon
so has part: feature:3406551-3406608:-1:exon
so has part: feature:3404991-3405054:-1:exon
so has part: feature:3400745-3400928:-1:exon
so has part: feature:3399111-3399201:-1:exon
so has part: feature:3397794-3397934:-1:exon
so has part: feature:3396771-3396911:-1:exon
so has part: feature:3396263-3396373:-1:exon
so has part: feature:3394265-3394375:-1:exon
so has part: feature:3391844-3391948:-1:exon
so has part: feature:3390253-3390348:-1:exon
so has part: feature:3389113-3389245:-1:exon
so has part: feature:3382335-3382706:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3430562-3430686:-1:exon

position:3430562:-1
position: 3430562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3426199-3426286:-1:exon

position:3426199:-1
position: 3426199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3426286:-1
position: 3426286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3425632-3425712:-1:exon

position:3425632:-1
position: 3425632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3425712:-1
position: 3425712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3421911-3422048:-1:exon

position:3421911:-1
position: 3421911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3422048:-1
position: 3422048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3420243-3420404:-1:exon

position:3420243:-1
position: 3420243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3420404:-1
position: 3420404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3419114-3419226:-1:exon

position:3419114:-1
position: 3419114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3419226:-1
position: 3419226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3418212-3418275:-1:exon

position:3418212:-1
position: 3418212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3418275:-1
position: 3418275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3417949-3418016:-1:exon

position:3417949:-1
position: 3417949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3418016:-1
position: 3418016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3417474-3417699:-1:exon

position:3417474:-1
position: 3417474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3417699:-1
position: 3417699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3414942-3415029:-1:exon

position:3414942:-1
position: 3414942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3415029:-1
position: 3415029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3414788-3414864:-1:exon

position:3414788:-1
position: 3414788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3414864:-1
position: 3414864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3413737-3413790:-1:exon

position:3413737:-1
position: 3413737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3413790:-1
position: 3413790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3412880-3413020:-1:exon

position:3412880:-1
position: 3412880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3413020:-1
position: 3413020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3412115-3412192:-1:exon

position:3412115:-1
position: 3412115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3412192:-1
position: 3412192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3409272-3409357:-1:exon

position:3409272:-1
position: 3409272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3409357:-1
position: 3409357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3409121-3409186:-1:exon

position:3409121:-1
position: 3409121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3409186:-1
position: 3409186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3408961-3409043:-1:exon

position:3408961:-1
position: 3408961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3409043:-1
position: 3409043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3407983-3408121:-1:exon

position:3407983:-1
position: 3407983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3408121:-1
position: 3408121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3407374-3407586:-1:exon

position:3407374:-1
position: 3407374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3407586:-1
position: 3407586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3406551-3406608:-1:exon

position:3406551:-1
position: 3406551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3406608:-1
position: 3406608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3404991-3405054:-1:exon

position:3404991:-1
position: 3404991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3405054:-1
position: 3405054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3400745-3400928:-1:exon

position:3400745:-1
position: 3400745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3400928:-1
position: 3400928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3399111-3399201:-1:exon

position:3399111:-1
position: 3399111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3399201:-1
position: 3399201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3397794-3397934:-1:exon

position:3397794:-1
position: 3397794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3397934:-1
position: 3397934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3396771-3396911:-1:exon

position:3396771:-1
position: 3396771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3396911:-1
position: 3396911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3396263-3396373:-1:exon

position:3396263:-1
position: 3396263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3396373:-1
position: 3396373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3394265-3394375:-1:exon

position:3394265:-1
position: 3394265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3394375:-1
position: 3394375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3391844-3391948:-1:exon

position:3391844:-1
position: 3391844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3391948:-1
position: 3391948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3390253-3390348:-1:exon

position:3390253:-1
position: 3390253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3390348:-1
position: 3390348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3389113-3389245:-1:exon

position:3389113:-1
position: 3389113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3389245:-1
position: 3389245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3382335-3382706:-1:exon

position:3382706:-1
position: 3382706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Lars1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Lars1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine--tRNA ligase, cytoplasmic
translation: MNGRLHLGHTFSLSKCEFAVGYQRLKGKSCLFPFGLHCTGMPIKACADKLKREIELYGCPPDFPEEEEEEEESSAKPGDIVMKDKAKGKKSKAAAKAGSSKYQWNIMKSLGLSDEDIAKFSEAEHWLDYFPPLAVQDLKKIGLKVDWRRSFITTDVNPYYDSFVRWQFLTLRERNKIKFGKRYTIYSPKDGQPCMDHDRQTGEGVGPQEYTLVKLKVLDPYPSKLSGLKGKNIFLVAATLRPETMFGQTNCWVRPDMKYIGFETANGDIFICTQRAARNMSYQGFTKHNGVVPVVKELMGEEILGASLSAPLTCYKVVYVLPMLTIKEDKGTGVVTSVPSDSPDDFAALRDLKKKQALRTKYGIRDDMVLPFEPVPVLEIPGIGNLPAVTVCDELKIQSQNDREKLAEAKEKLYLRGFYDGVMLVDGFKGQKIQHVKKTIQKNMIDAGDALIYMEPEKQVMSRSADECVVALCDQWYLDYGDENWKKQTFQCLKNMETFCEESRKNFEASLDWLQEHACSRTYGLGTRLPWDEQWLIESLSDSTIYMAFYTVAHLLQGGDLQGQAESPLGIRPQQMTRDVWDYVFFKDAPFPKTQIPKEKLDQLKQEFEFWYPVDLRASGKDLIPNHLSYYIYNHVAMWPEQSDKWPVSVRANGHLLLNSEKMSKSTGNFLTLSQAVDKFSADGMRLALADAGDTVEDANFVEAMADAGILRLYTWVEWVKEMLATCSSLRSGPANSFNDRVFASEMNAGIIKTDQNYEKMMFKEALKTGFFEFQAAKDKYRELATEGMHRELVFRFIEVQTILLTPFCPHLCEHIWTLLGKPDSIMHASWPVAGPVDESLIRSSQYLMEVAHDLRLRLKNYMMPAKGKKTDKQPVQRPSHCTIYVAKNYPVWQHITLTTLRSHFEANNGKLPDNKVIACELGSLPELKKYMKKVMPFVAMIKENMEKKGPRVLDLELEFDEQAVLMENIVYLTNSLELEHIDVKFASEAEDKVREECCPGKPLNVFRTEPGVPVSLVNPQPSSGHFSTKIDIRQGDSCESIIRRLTKTDRGIKDLSKVKLMRFDDPLLGPRRVPVLGREQNEKTLISENAIFHVDLVSKKVHLTENGLREDIGDTIVYLVH
SIO_010081: Lars1
subclass of: SO_0000673
so part of: Lars1
location: complement(join(3382501..3382706,3389113..3389245,3390253..3390348,3391844..3391948,3394265..3394375,3396263..3396373,3396771..3396911,3397794..3397934,3399111..3399201,3400745..3400928,3404991..3405054,3406551..3406608,3407374..3407586,3407983..3408121,3408961..3409043,3409121..3409186,3409272..3409357,3412115..3412192,3412880..3413020,3413737..3413790,3414788..3414864,3414942..3415029,3417474..3417699,3417949..3418016,3418212..3418275,3419114..3419226,3420243..3420404,3421911..3422048,3425632..3425712,3426199..3426249))
location: region:3382501-3426249:-1
so has part: feature:3426199-3426249:-1:exon
so has part: feature:3425632-3425712:-1:exon
so has part: feature:3421911-3422048:-1:exon
so has part: feature:3420243-3420404:-1:exon
so has part: feature:3419114-3419226:-1:exon
so has part: feature:3418212-3418275:-1:exon
so has part: feature:3417949-3418016:-1:exon
so has part: feature:3417474-3417699:-1:exon
so has part: feature:3414942-3415029:-1:exon
so has part: feature:3414788-3414864:-1:exon
so has part: feature:3413737-3413790:-1:exon
so has part: feature:3412880-3413020:-1:exon
so has part: feature:3412115-3412192:-1:exon
so has part: feature:3409272-3409357:-1:exon
so has part: feature:3409121-3409186:-1:exon
so has part: feature:3408961-3409043:-1:exon
so has part: feature:3407983-3408121:-1:exon
so has part: feature:3407374-3407586:-1:exon
so has part: feature:3406551-3406608:-1:exon
so has part: feature:3404991-3405054:-1:exon
so has part: feature:3400745-3400928:-1:exon
so has part: feature:3399111-3399201:-1:exon
so has part: feature:3397794-3397934:-1:exon
so has part: feature:3396771-3396911:-1:exon
so has part: feature:3396263-3396373:-1:exon
so has part: feature:3394265-3394375:-1:exon
so has part: feature:3391844-3391948:-1:exon
so has part: feature:3390253-3390348:-1:exon
so has part: feature:3389113-3389245:-1:exon
so has part: feature:3382501-3382706:-1:exon

XP_032741291.1
type: Protein
SIO_000068: ncbiprotein

position:3382501:-1
position: 3382501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3426249:-1
position: 3426249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3426199-3426249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3425632-3425712:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3421911-3422048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3420243-3420404:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3419114-3419226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3418212-3418275:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3417949-3418016:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3417474-3417699:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3414942-3415029:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3414788-3414864:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3413737-3413790:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3412880-3413020:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3412115-3412192:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3409272-3409357:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3409121-3409186:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3408961-3409043:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3407983-3408121:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3407374-3407586:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3406551-3406608:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3404991-3405054:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3400745-3400928:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3399111-3399201:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3397794-3397934:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3396771-3396911:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3396263-3396373:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3394265-3394375:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3391844-3391948:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3390253-3390348:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3389113-3389245:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3382501-3382706:-1:exon

Rbm27
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Rbm27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3451258..3514090
location: region:3451258-3514090:1
so has part: feature:3451258-3514090:1:exon
subclass of: SO_0000010

116884284
type: Gene
SIO_000068: ncbigene

position:3451258:1
position: 3451258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3514090:1
position: 3514090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3451258-3514090:1:exon

Rbm27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Rbm27
product: RNA binding motif protein 27
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 14 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885380.1
SIO_010081: Rbm27
subclass of: SO_0000673
so part of: Rbm27
location: join(3451258..3451518,3463402..3463520,3467277..3467401,3473703..3473794,3474414..3474607,3475329..3475589,3476832..3477125,3480901..3481035,3489014..3489178,3492782..3492931,3494738..3494882,3495626..3495779,3496795..3497091,3498829..3498972,3500594..3500713,3501855..3501929,3502049..3502213,3505533..3505637,3505745..3505933,3509609..3509719,3510959..3514090)
location: region:3451258-3514090:1
so has part: feature:3451258-3451518:1:exon
so has part: feature:3463402-3463520:1:exon
so has part: feature:3467277-3467401:1:exon
so has part: feature:3473703-3473794:1:exon
so has part: feature:3474414-3474607:1:exon
so has part: feature:3475329-3475589:1:exon
so has part: feature:3476832-3477125:1:exon
so has part: feature:3480901-3481035:1:exon
so has part: feature:3489014-3489178:1:exon
so has part: feature:3492782-3492931:1:exon
so has part: feature:3494738-3494882:1:exon
so has part: feature:3495626-3495779:1:exon
so has part: feature:3496795-3497091:1:exon
so has part: feature:3498829-3498972:1:exon
so has part: feature:3500594-3500713:1:exon
so has part: feature:3501855-3501929:1:exon
so has part: feature:3502049-3502213:1:exon
so has part: feature:3505533-3505637:1:exon
so has part: feature:3505745-3505933:1:exon
so has part: feature:3509609-3509719:1:exon
so has part: feature:3510959-3514090:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3451258-3451518:1:exon

position:3451518:1
position: 3451518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3463402-3463520:1:exon

position:3463402:1
position: 3463402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3463520:1
position: 3463520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3467277-3467401:1:exon

position:3467277:1
position: 3467277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3467401:1
position: 3467401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3473703-3473794:1:exon

position:3473703:1
position: 3473703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3473794:1
position: 3473794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3474414-3474607:1:exon

position:3474414:1
position: 3474414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3474607:1
position: 3474607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3475329-3475589:1:exon

position:3475329:1
position: 3475329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3475589:1
position: 3475589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3476832-3477125:1:exon

position:3476832:1
position: 3476832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3477125:1
position: 3477125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3480901-3481035:1:exon

position:3480901:1
position: 3480901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3481035:1
position: 3481035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3489014-3489178:1:exon

position:3489014:1
position: 3489014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3489178:1
position: 3489178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3492782-3492931:1:exon

position:3492782:1
position: 3492782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3492931:1
position: 3492931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3494738-3494882:1:exon

position:3494738:1
position: 3494738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3494882:1
position: 3494882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3495626-3495779:1:exon

position:3495626:1
position: 3495626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3495779:1
position: 3495779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3496795-3497091:1:exon

position:3496795:1
position: 3496795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3497091:1
position: 3497091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3498829-3498972:1:exon

position:3498829:1
position: 3498829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3498972:1
position: 3498972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3500594-3500713:1:exon

position:3500594:1
position: 3500594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3500713:1
position: 3500713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3501855-3501929:1:exon

position:3501855:1
position: 3501855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3501929:1
position: 3501929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3502049-3502213:1:exon

position:3502049:1
position: 3502049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3502213:1
position: 3502213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3505533-3505637:1:exon

position:3505533:1
position: 3505533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3505637:1
position: 3505637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3505745-3505933:1:exon

position:3505745:1
position: 3505745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3505933:1
position: 3505933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3509609-3509719:1:exon

position:3509609:1
position: 3509609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3509719:1
position: 3509719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3510959-3514090:1:exon

position:3510959:1
position: 3510959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rbm27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Rbm27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 27
translation: MLIEDVDALKSWLAKLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKNYLPPLEPVKPEPKPLVQEKEEIKEEVFQEPAEEERDVRKKKYPSPQKSRSESSERRTREKKREDGKWRDYERYYERNELYREKYDWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDPSRNVEHRERSKFKSERNDLESSYVPVSAPPPSSSEQYSSGAQSIPSTVTVIAPAHHSENTTESWSNYYNNHSSSNSFGRNPPPKRRCRDYDERGFCVLGDLCQFDHGNDPLVVDEVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVLPIPRPPISQSSLINSRDQPGTSAVHNLAPVGARLPPPLPQNLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHTSVSSPTPLVPDTYEPDGYNPEAPSITSSGRSQYRQFFSRAQTQRPNLIGLTSGDMDANPRAANIVIQTEPPVPVSINSNITRVVLEPESRKRAISGLEGPLTKKPWLGKQGNNNQSKPGFLRKNQYTNTKLEVKKIPQELNNITKLNEHFSKFGTIVNIQVAFKGDPEAALIQYLTNEEARKAISSTEAVLNNRFIRVLWHRENNEQPALQSPAQILLQQQHTLSHLSQQHHNLPQHLHPQQVMVTQSSPSSVHGGIQKMMGKPQTSGAYVLNKVPVKHRLGHATTNQSDTSHLLNQTGGSSGDDCPVFSTPGHPKTIYSSSNLKAPSKLCSGSKSHDVQEVLKKKQEAMKLQQDMRKKRQEMLEKQIECQKMLISKLEKNKNMKPEERANIMKTLKELGEKISQLKDELKTSSAVSTPSKVKTKTEAQKELLDTELDLHKRLSSGEDTTELRKKLSQLQVEAARLGILPVGRGKTMSSQGRGRGRGRGRGRGSLNHMVVDHRPKALPAGGFIEEEKEELLQHFSATNQSSKFKDRRLQISWHKPKVPSISTETEEEEVKEEETETSDLFLHDDDDEDEDEYESRSWRR
SIO_010081: Rbm27
subclass of: SO_0000673
so part of: Rbm27
location: join(3451460..3451518,3463402..3463520,3467277..3467401,3473703..3473794,3474414..3474607,3475329..3475589,3476832..3477125,3480901..3481035,3489014..3489178,3492782..3492931,3494738..3494882,3495626..3495779,3496795..3497091,3498829..3498972,3500594..3500713,3501855..3501929,3502049..3502213,3505533..3505637,3505745..3505933,3509609..3509719,3510959..3511042)
location: region:3451460-3511042:1
so has part: feature:3451460-3451518:1:exon
so has part: feature:3463402-3463520:1:exon
so has part: feature:3467277-3467401:1:exon
so has part: feature:3473703-3473794:1:exon
so has part: feature:3474414-3474607:1:exon
so has part: feature:3475329-3475589:1:exon
so has part: feature:3476832-3477125:1:exon
so has part: feature:3480901-3481035:1:exon
so has part: feature:3489014-3489178:1:exon
so has part: feature:3492782-3492931:1:exon
so has part: feature:3494738-3494882:1:exon
so has part: feature:3495626-3495779:1:exon
so has part: feature:3496795-3497091:1:exon
so has part: feature:3498829-3498972:1:exon
so has part: feature:3500594-3500713:1:exon
so has part: feature:3501855-3501929:1:exon
so has part: feature:3502049-3502213:1:exon
so has part: feature:3505533-3505637:1:exon
so has part: feature:3505745-3505933:1:exon
so has part: feature:3509609-3509719:1:exon
so has part: feature:3510959-3511042:1:exon

XP_032741271.1
type: Protein
SIO_000068: ncbiprotein

position:3451460:1
position: 3451460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3511042:1
position: 3511042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3451460-3451518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3463402-3463520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3467277-3467401:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3473703-3473794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3474414-3474607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3475329-3475589:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3476832-3477125:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3480901-3481035:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3489014-3489178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3492782-3492931:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3494738-3494882:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3495626-3495779:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3496795-3497091:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3498829-3498972:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3500594-3500713:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3501855-3501929:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3502049-3502213:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3505533-3505637:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3505745-3505933:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3509609-3509719:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3510959-3511042:1:exon

LOC116885084
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116885084
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 3531328..3531427
location: region:3531328-3531427:1
so has part: feature:3531328-3531427:1:exon

116885084
type: Gene
SIO_000068: ncbigene

position:3531328:1
position: 3531328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3531427:1
position: 3531427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3531328-3531427:1:exon

LOC116885084
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116885084
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116885084
subclass of: SO_0000673
so part of: LOC116885084
location: 3531328..3531427
location: region:3531328-3531427:1
so has part: feature:3531328-3531427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3531328-3531427:1:exon

Pou4f3
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Pou4f3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3567074..3569657
location: region:3567074-3569657:1
so has part: feature:3567074-3569657:1:exon
subclass of: SO_0000010

116884719
type: Gene
SIO_000068: ncbigene

position:3567074:1
position: 3567074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3569657:1
position: 3569657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3567074-3569657:1:exon

Pou4f3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Pou4f3
product: POU class 4 homeobox 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885905.1
SIO_010081: Pou4f3
subclass of: SO_0000673
so part of: Pou4f3
location: join(3567074..3567193,3567513..3569657)
location: region:3567074-3569657:1
so has part: feature:3567074-3567193:1:exon
so has part: feature:3567513-3569657:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3567074-3567193:1:exon

position:3567193:1
position: 3567193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3567513-3569657:1:exon

position:3567513:1
position: 3567513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pou4f3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Pou4f3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POU domain, class 4, transcription factor 3
translation: MMAMNAKQPFGMHPVLQEPKFSSLHSGSEAMRRVCLPAPQLQGNIFGSFDESLLARAEALAAVDIVSHGKNHPFKPDATYHTMSSVPCTSTSPTVPISHPAALTSHPHHAVHQGLEGDLLEHISPTLSVSGLGAPEHSVMPAQIHPHHLGAMGHLHQAMGMSHPHAVAPHSAMPACLSDVESDPRELEAFAERFKQRRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPELFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH
SIO_010081: Pou4f3
subclass of: SO_0000673
so part of: Pou4f3
location: join(3567074..3567193,3567513..3568409)
location: region:3567074-3568409:1
so has part: feature:3567074-3567193:1:exon
so has part: feature:3567513-3568409:1:exon

XP_032741796.1
type: Protein
SIO_000068: ncbiprotein

position:3568409:1
position: 3568409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3567074-3567193:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3567513-3568409:1:exon

LOC116884900
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3577097..3605611)
location: region:3577097-3605611:-1
so has part: feature:3577097-3605611:-1:exon

116884900
type: Gene
SIO_000068: ncbigene

position:3577097:-1
position: 3577097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3605611:-1
position: 3605611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3577097-3605611:-1:exon

LOC116884900
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884900
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC116884900
subclass of: SO_0000673
so part of: LOC116884900
location: complement(3577097..3577720)
location: region:3577097-3577720:-1
so has part: feature:3577097-3577720:-1:exon

position:3577720:-1
position: 3577720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3577097-3577720:-1:exon

LOC116884900
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884900
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC116884900
subclass of: SO_0000673
so part of: LOC116884900
location: complement(3599634..3599702)
location: region:3599634-3599702:-1
so has part: feature:3599634-3599702:-1:exon

position:3599634:-1
position: 3599634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3599702:-1
position: 3599702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3599634-3599702:-1:exon

LOC116884900
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884900
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC116884900
subclass of: SO_0000673
so part of: LOC116884900
location: complement(3602829..3602914)
location: region:3602829-3602914:-1
so has part: feature:3602829-3602914:-1:exon

position:3602829:-1
position: 3602829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3602914:-1
position: 3602914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3602829-3602914:-1:exon

LOC116884900
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884900
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC116884900
subclass of: SO_0000673
so part of: LOC116884900
location: complement(3605551..3605611)
location: region:3605551-3605611:-1
so has part: feature:3605551-3605611:-1:exon

position:3605551:-1
position: 3605551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3605551-3605611:-1:exon

LOC116884901
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3648558..3649067
location: region:3648558-3649067:1
so has part: feature:3648558-3649067:1:exon
subclass of: SO_0000010

116884901
type: Gene
SIO_000068: ncbigene

position:3648558:1
position: 3648558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3649067:1
position: 3649067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3648558-3649067:1:exon

LOC116884901
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884901
product: 40S ribosomal protein S2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_032886128.1
SIO_010081: LOC116884901
subclass of: SO_0000673
so part of: LOC116884901
location: 3648558..3649067
location: region:3648558-3649067:1
so has part: feature:3648558-3649067:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3648558-3649067:1:exon

LOC116884901
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S2-like
translation: MIIGFSLRTSLRDEDYASADPDLAAQQTWFKDFVSIRDYSSHVDLDDKCSKKTATAIVLVWKGTRETRLASLTVSRKVTGQCVSVMICLIPPPRNVLSAPVPKKLLLLVNIDDCYTSARGCTATLDNFDKATFNAISNTYSYLTPLLTFTNLCRSLSLRSGIWDLERAG
SIO_010081: LOC116884901
subclass of: SO_0000673
so part of: LOC116884901
location: 3648558..3649067
location: region:3648558-3649067:1
so has part: feature:3648558-3649067:1:exon

XP_032742019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3648558-3649067:1:exon

Tcerg1
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Tcerg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3672524..3731710
location: region:3672524-3731710:1
so has part: feature:3672524-3731710:1:exon
subclass of: SO_0000010

116884823
type: Gene
SIO_000068: ncbigene

position:3672524:1
position: 3672524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3731710:1
position: 3731710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3672524-3731710:1:exon

Tcerg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Tcerg1
product: transcription elongation regulator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 104 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032886055.1
SIO_010081: Tcerg1
subclass of: SO_0000673
so part of: Tcerg1
location: join(3672524..3672622,3678963..3679188,3681908..3682060,3682855..3683251,3689425..3689667,3693733..3693795,3694796..3694996,3695471..3695583,3696555..3696643,3707452..3707612,3708957..3709013,3709159..3709225,3711560..3711695,3712472..3712561,3718096..3718214,3720349..3720499,3723925..3724089,3724496..3724678,3727023..3727202,3727829..3727912,3729320..3729420,3730614..3731672)
location: region:3672524-3731672:1
so has part: feature:3672524-3672622:1:exon
so has part: feature:3678963-3679188:1:exon
so has part: feature:3681908-3682060:1:exon
so has part: feature:3682855-3683251:1:exon
so has part: feature:3689425-3689667:1:exon
so has part: feature:3693733-3693795:1:exon
so has part: feature:3694796-3694996:1:exon
so has part: feature:3695471-3695583:1:exon
so has part: feature:3696555-3696643:1:exon
so has part: feature:3707452-3707612:1:exon
so has part: feature:3708957-3709013:1:exon
so has part: feature:3709159-3709225:1:exon
so has part: feature:3711560-3711695:1:exon
so has part: feature:3712472-3712561:1:exon
so has part: feature:3718096-3718214:1:exon
so has part: feature:3720349-3720499:1:exon
so has part: feature:3723925-3724089:1:exon
so has part: feature:3724496-3724678:1:exon
so has part: feature:3727023-3727202:1:exon
so has part: feature:3727829-3727912:1:exon
so has part: feature:3729320-3729420:1:exon
so has part: feature:3730614-3731672:1:exon

position:3731672:1
position: 3731672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3672524-3672622:1:exon

position:3672622:1
position: 3672622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3678963-3679188:1:exon

position:3678963:1
position: 3678963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3679188:1
position: 3679188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3681908-3682060:1:exon

position:3681908:1
position: 3681908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3682060:1
position: 3682060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3682855-3683251:1:exon

position:3682855:1
position: 3682855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3683251:1
position: 3683251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3689425-3689667:1:exon

position:3689425:1
position: 3689425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3689667:1
position: 3689667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3693733-3693795:1:exon

position:3693733:1
position: 3693733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3693795:1
position: 3693795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3694796-3694996:1:exon

position:3694796:1
position: 3694796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3694996:1
position: 3694996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3695471-3695583:1:exon

position:3695471:1
position: 3695471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3695583:1
position: 3695583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3696555-3696643:1:exon

position:3696555:1
position: 3696555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3696643:1
position: 3696643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3707452-3707612:1:exon

position:3707452:1
position: 3707452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3707612:1
position: 3707612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3708957-3709013:1:exon

position:3708957:1
position: 3708957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3709013:1
position: 3709013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3709159-3709225:1:exon

position:3709159:1
position: 3709159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3709225:1
position: 3709225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3711560-3711695:1:exon

position:3711560:1
position: 3711560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3711695:1
position: 3711695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3712472-3712561:1:exon

position:3712472:1
position: 3712472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3712561:1
position: 3712561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3718096-3718214:1:exon

position:3718096:1
position: 3718096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3718214:1
position: 3718214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3720349-3720499:1:exon

position:3720349:1
position: 3720349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3720499:1
position: 3720499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3723925-3724089:1:exon

position:3723925:1
position: 3723925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3724089:1
position: 3724089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3724496-3724678:1:exon

position:3724496:1
position: 3724496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3724678:1
position: 3724678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3727023-3727202:1:exon

position:3727023:1
position: 3727023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3727202:1
position: 3727202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3727829-3727912:1:exon

position:3727829:1
position: 3727829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3727912:1
position: 3727912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3729320-3729420:1:exon

position:3729320:1
position: 3729320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3729420:1
position: 3729420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3730614-3731672:1:exon

position:3730614:1
position: 3730614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tcerg1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 10117
gene: Tcerg1
product: transcription elongation regulator 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 106 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004385901.1
SIO_010081: Tcerg1
so part of: Tcerg1
location: join(3672529..3672622,3678963..3679188,3681908..3682060,3682855..3683251,3689425..3689667,3693733..3693795,3694796..3694996,3695471..3695583,3696555..3696643,3707452..3707612,3708957..3709013,3709159..3709225,3710230..3710280,3711560..3711695,3712472..3712561,3718096..3718214,3720349..3720499,3723925..3724089,3724496..3724678,3727023..3727202,3727829..3727912,3729320..3729420,3730261..3730354,3730614..3731710)
location: region:3672529-3731710:1
so has part: feature:3672529-3672622:1:exon
so has part: feature:3678963-3679188:1:exon
so has part: feature:3681908-3682060:1:exon
so has part: feature:3682855-3683251:1:exon
so has part: feature:3689425-3689667:1:exon
so has part: feature:3693733-3693795:1:exon
so has part: feature:3694796-3694996:1:exon
so has part: feature:3695471-3695583:1:exon
so has part: feature:3696555-3696643:1:exon
so has part: feature:3707452-3707612:1:exon
so has part: feature:3708957-3709013:1:exon
so has part: feature:3709159-3709225:1:exon
so has part: feature:3710230-3710280:1:exon
so has part: feature:3711560-3711695:1:exon
so has part: feature:3712472-3712561:1:exon
so has part: feature:3718096-3718214:1:exon
so has part: feature:3720349-3720499:1:exon
so has part: feature:3723925-3724089:1:exon
so has part: feature:3724496-3724678:1:exon
so has part: feature:3727023-3727202:1:exon
so has part: feature:3727829-3727912:1:exon
so has part: feature:3729320-3729420:1:exon
so has part: feature:3730261-3730354:1:exon
so has part: feature:3730614-3731710:1:exon

position:3672529:1
position: 3672529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3672529-3672622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3678963-3679188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3681908-3682060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3682855-3683251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3689425-3689667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3693733-3693795:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3694796-3694996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3695471-3695583:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3696555-3696643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3707452-3707612:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3708957-3709013:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3709159-3709225:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3710230-3710280:1:exon

position:3710230:1
position: 3710230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3710280:1
position: 3710280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3711560-3711695:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3712472-3712561:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3718096-3718214:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3720349-3720499:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3723925-3724089:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3724496-3724678:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3727023-3727202:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3727829-3727912:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3729320-3729420:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3730261-3730354:1:exon

position:3730261:1
position: 3730261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3730354:1
position: 3730354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3730614-3731710:1:exon

Tcerg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Tcerg1
product: transcription elongation regulator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 120 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032886054.1
SIO_010081: Tcerg1
subclass of: SO_0000673
so part of: Tcerg1
location: join(3672529..3672622,3678963..3679188,3681908..3682060,3682855..3683251,3689425..3689667,3693733..3693795,3694796..3694996,3695471..3695583,3696555..3696643,3707452..3707612,3708957..3709013,3709159..3709225,3710230..3710280,3711560..3711695,3712472..3712561,3718096..3718214,3720349..3720499,3723925..3724089,3724496..3724678,3727023..3727202,3727829..3727912,3729320..3729420,3730614..3731672)
location: region:3672529-3731672:1
so has part: feature:3672529-3672622:1:exon
so has part: feature:3678963-3679188:1:exon
so has part: feature:3681908-3682060:1:exon
so has part: feature:3682855-3683251:1:exon
so has part: feature:3689425-3689667:1:exon
so has part: feature:3693733-3693795:1:exon
so has part: feature:3694796-3694996:1:exon
so has part: feature:3695471-3695583:1:exon
so has part: feature:3696555-3696643:1:exon
so has part: feature:3707452-3707612:1:exon
so has part: feature:3708957-3709013:1:exon
so has part: feature:3709159-3709225:1:exon
so has part: feature:3710230-3710280:1:exon
so has part: feature:3711560-3711695:1:exon
so has part: feature:3712472-3712561:1:exon
so has part: feature:3718096-3718214:1:exon
so has part: feature:3720349-3720499:1:exon
so has part: feature:3723925-3724089:1:exon
so has part: feature:3724496-3724678:1:exon
so has part: feature:3727023-3727202:1:exon
so has part: feature:3727829-3727912:1:exon
so has part: feature:3729320-3729420:1:exon
so has part: feature:3730614-3731672:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3672529-3672622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3678963-3679188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3681908-3682060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3682855-3683251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3689425-3689667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3693733-3693795:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3694796-3694996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3695471-3695583:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3696555-3696643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3707452-3707612:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3708957-3709013:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3709159-3709225:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3710230-3710280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3711560-3711695:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3712472-3712561:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3718096-3718214:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3720349-3720499:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3723925-3724089:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3724496-3724678:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3727023-3727202:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3727829-3727912:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3729320-3729420:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3730614-3731672:1:exon

Tcerg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Tcerg1
product: transcription elongation regulator 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 113 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032886058.1
SIO_010081: Tcerg1
subclass of: SO_0000673
so part of: Tcerg1
location: join(3672529..3672622,3678963..3679188,3681908..3682060,3682855..3683251,3689425..3689667,3693733..3693795,3694796..3694996,3695471..3695583,3696555..3696643,3707452..3707612,3708957..3709013,3709159..3709225,3710230..3710280,3711560..3711695,3712472..3712561,3718096..3718214,3720349..3720499,3724496..3724678,3727023..3727202,3727829..3727912,3729320..3729420,3730614..3731672)
location: region:3672529-3731672:1
so has part: feature:3672529-3672622:1:exon
so has part: feature:3678963-3679188:1:exon
so has part: feature:3681908-3682060:1:exon
so has part: feature:3682855-3683251:1:exon
so has part: feature:3689425-3689667:1:exon
so has part: feature:3693733-3693795:1:exon
so has part: feature:3694796-3694996:1:exon
so has part: feature:3695471-3695583:1:exon
so has part: feature:3696555-3696643:1:exon
so has part: feature:3707452-3707612:1:exon
so has part: feature:3708957-3709013:1:exon
so has part: feature:3709159-3709225:1:exon
so has part: feature:3710230-3710280:1:exon
so has part: feature:3711560-3711695:1:exon
so has part: feature:3712472-3712561:1:exon
so has part: feature:3718096-3718214:1:exon
so has part: feature:3720349-3720499:1:exon
so has part: feature:3724496-3724678:1:exon
so has part: feature:3727023-3727202:1:exon
so has part: feature:3727829-3727912:1:exon
so has part: feature:3729320-3729420:1:exon
so has part: feature:3730614-3731672:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3672529-3672622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3678963-3679188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3681908-3682060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3682855-3683251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3689425-3689667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3693733-3693795:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3694796-3694996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3695471-3695583:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3696555-3696643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3707452-3707612:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3708957-3709013:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3709159-3709225:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3710230-3710280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3711560-3711695:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3712472-3712561:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3718096-3718214:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3720349-3720499:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3724496-3724678:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3727023-3727202:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3727829-3727912:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3729320-3729420:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3730614-3731672:1:exon

Tcerg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Tcerg1
product: transcription elongation regulator 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 116 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032886056.1
SIO_010081: Tcerg1
subclass of: SO_0000673
so part of: Tcerg1
location: join(3672529..3672622,3678963..3679188,3681908..3682060,3682855..3683251,3689425..3689667,3694796..3694996,3695471..3695583,3696555..3696643,3707452..3707612,3708957..3709013,3709159..3709225,3710230..3710280,3711560..3711695,3712472..3712561,3718096..3718214,3720349..3720499,3723925..3724089,3724496..3724678,3727023..3727202,3727829..3727912,3729320..3729420,3730614..3731672)
location: region:3672529-3731672:1
so has part: feature:3672529-3672622:1:exon
so has part: feature:3678963-3679188:1:exon
so has part: feature:3681908-3682060:1:exon
so has part: feature:3682855-3683251:1:exon
so has part: feature:3689425-3689667:1:exon
so has part: feature:3694796-3694996:1:exon
so has part: feature:3695471-3695583:1:exon
so has part: feature:3696555-3696643:1:exon
so has part: feature:3707452-3707612:1:exon
so has part: feature:3708957-3709013:1:exon
so has part: feature:3709159-3709225:1:exon
so has part: feature:3710230-3710280:1:exon
so has part: feature:3711560-3711695:1:exon
so has part: feature:3712472-3712561:1:exon
so has part: feature:3718096-3718214:1:exon
so has part: feature:3720349-3720499:1:exon
so has part: feature:3723925-3724089:1:exon
so has part: feature:3724496-3724678:1:exon
so has part: feature:3727023-3727202:1:exon
so has part: feature:3727829-3727912:1:exon
so has part: feature:3729320-3729420:1:exon
so has part: feature:3730614-3731672:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3672529-3672622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3678963-3679188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3681908-3682060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3682855-3683251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3689425-3689667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3694796-3694996:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3695471-3695583:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3696555-3696643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3707452-3707612:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3708957-3709013:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3709159-3709225:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3710230-3710280:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3711560-3711695:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3712472-3712561:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3718096-3718214:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3720349-3720499:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3723925-3724089:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3724496-3724678:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3727023-3727202:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3727829-3727912:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3729320-3729420:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3730614-3731672:1:exon

Tcerg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Tcerg1
product: transcription elongation regulator 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 100 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032886057.1
SIO_010081: Tcerg1
subclass of: SO_0000673
so part of: Tcerg1
location: join(3672529..3672622,3678963..3679188,3681908..3682060,3682855..3683251,3689425..3689667,3694796..3694996,3695471..3695583,3696555..3696643,3707452..3707612,3708957..3709013,3709159..3709225,3711560..3711695,3712472..3712561,3718096..3718214,3720349..3720499,3723925..3724089,3724496..3724678,3727023..3727202,3727829..3727912,3729320..3729420,3730614..3731672)
location: region:3672529-3731672:1
so has part: feature:3672529-3672622:1:exon
so has part: feature:3678963-3679188:1:exon
so has part: feature:3681908-3682060:1:exon
so has part: feature:3682855-3683251:1:exon
so has part: feature:3689425-3689667:1:exon
so has part: feature:3694796-3694996:1:exon
so has part: feature:3695471-3695583:1:exon
so has part: feature:3696555-3696643:1:exon
so has part: feature:3707452-3707612:1:exon
so has part: feature:3708957-3709013:1:exon
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so has part: feature:3711560-3711695:1:exon
so has part: feature:3712472-3712561:1:exon
so has part: feature:3718096-3718214:1:exon
so has part: feature:3720349-3720499:1:exon
so has part: feature:3723925-3724089:1:exon
so has part: feature:3724496-3724678:1:exon
so has part: feature:3727023-3727202:1:exon
so has part: feature:3727829-3727912:1:exon
so has part: feature:3729320-3729420:1:exon
so has part: feature:3730614-3731672:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3672529-3672622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3678963-3679188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3681908-3682060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3682855-3683251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3689425-3689667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3694796-3694996:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3695471-3695583:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3696555-3696643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3707452-3707612:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3708957-3709013:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3709159-3709225:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3711560-3711695:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3712472-3712561:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3718096-3718214:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3720349-3720499:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3723925-3724089:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3724496-3724678:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3727023-3727202:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3727829-3727912:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3729320-3729420:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3730614-3731672:1:exon

Tcerg1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Tcerg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X1
translation: MAERGGDGGEGERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGAMPPPPGMMFPPGMPPGTAPGAPALPPTEEIWVENKTPDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAAQAQAQAQAQAQAQAQAQAQAQVQAQAVGAPTPTTSSPAPAVSTSAPTSTPSSTTATTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSAPAPTATPVQTVPQPHPQTLPPAVPHSVPQPAAAIPAFPPVMVPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVAIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLDEKIKEPIKEASEEPLPMETEEEDPKEEPIKEIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGLEDMKKLRHPAPTMLSIQKWQFSMSAIKEEQELMEEMNEDEPIKAKKRKRMSKKPFMWIARASLFRRDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVAYVDDLDRRGPPPPPTASEPTRRSTK
SIO_010081: Tcerg1
subclass of: SO_0000673
so part of: Tcerg1
location: join(3672564..3672622,3678963..3679188,3681908..3682060,3682855..3683251,3689425..3689667,3693733..3693795,3694796..3694996,3695471..3695583,3696555..3696643,3707452..3707612,3708957..3709013,3709159..3709225,3710230..3710280,3711560..3711695,3712472..3712561,3718096..3718214,3720349..3720499,3723925..3724089,3724496..3724678,3727023..3727202,3727829..3727912,3729320..3729420,3730614..3730815)
location: region:3672564-3730815:1
so has part: feature:3672564-3672622:1:exon
so has part: feature:3678963-3679188:1:exon
so has part: feature:3681908-3682060:1:exon
so has part: feature:3682855-3683251:1:exon
so has part: feature:3689425-3689667:1:exon
so has part: feature:3693733-3693795:1:exon
so has part: feature:3694796-3694996:1:exon
so has part: feature:3695471-3695583:1:exon
so has part: feature:3696555-3696643:1:exon
so has part: feature:3707452-3707612:1:exon
so has part: feature:3708957-3709013:1:exon
so has part: feature:3709159-3709225:1:exon
so has part: feature:3710230-3710280:1:exon
so has part: feature:3711560-3711695:1:exon
so has part: feature:3712472-3712561:1:exon
so has part: feature:3718096-3718214:1:exon
so has part: feature:3720349-3720499:1:exon
so has part: feature:3723925-3724089:1:exon
so has part: feature:3724496-3724678:1:exon
so has part: feature:3727023-3727202:1:exon
so has part: feature:3727829-3727912:1:exon
so has part: feature:3729320-3729420:1:exon
so has part: feature:3730614-3730815:1:exon

XP_032741945.1
type: Protein
SIO_000068: ncbiprotein

position:3672564:1
position: 3672564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3730815:1
position: 3730815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3672564-3672622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3678963-3679188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3681908-3682060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3682855-3683251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3689425-3689667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3693733-3693795:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3694796-3694996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3695471-3695583:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3696555-3696643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3707452-3707612:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3708957-3709013:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3709159-3709225:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3710230-3710280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3711560-3711695:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3712472-3712561:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3718096-3718214:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3720349-3720499:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3723925-3724089:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3724496-3724678:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3727023-3727202:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3727829-3727912:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3729320-3729420:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3730614-3730815:1:exon

Tcerg1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Tcerg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X5
translation: MAERGGDGGEGERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGAMPPPPGMMFPPGMPPGTAPGAPALPPTEEIWVENKTPDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAAQAQAQAQAQAQAQAQAQAQAQVQAQAVGAPTPTTSSPAPAVSTSAPTSTPSSTTATTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSAPAPTATPVQTVPQPHPQTLPPAVPHSVPQPAAAIPAFPPVMVPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVAIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLDEKIKEPIKEASEEPLPMETEEEDPKEEPIKEIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGLEDMKKLRHPAPTMLSIQKWQFSMSAIKEEQELMEEMNEDEPIKAKKRKRMSKKPFMWIARASLFRRDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVAYVDDLDRRGPPPPPTASEPTRRSTK
SIO_010081: Tcerg1
subclass of: SO_0000673
so part of: Tcerg1
location: join(3672564..3672622,3678963..3679188,3681908..3682060,3682855..3683251,3689425..3689667,3693733..3693795,3694796..3694996,3695471..3695583,3696555..3696643,3707452..3707612,3708957..3709013,3709159..3709225,3710230..3710280,3711560..3711695,3712472..3712561,3718096..3718214,3720349..3720499,3724496..3724678,3727023..3727202,3727829..3727912,3729320..3729420,3730614..3730815)
location: region:3672564-3730815:1
so has part: feature:3672564-3672622:1:exon
so has part: feature:3678963-3679188:1:exon
so has part: feature:3681908-3682060:1:exon
so has part: feature:3682855-3683251:1:exon
so has part: feature:3689425-3689667:1:exon
so has part: feature:3693733-3693795:1:exon
so has part: feature:3694796-3694996:1:exon
so has part: feature:3695471-3695583:1:exon
so has part: feature:3696555-3696643:1:exon
so has part: feature:3707452-3707612:1:exon
so has part: feature:3708957-3709013:1:exon
so has part: feature:3709159-3709225:1:exon
so has part: feature:3710230-3710280:1:exon
so has part: feature:3711560-3711695:1:exon
so has part: feature:3712472-3712561:1:exon
so has part: feature:3718096-3718214:1:exon
so has part: feature:3720349-3720499:1:exon
so has part: feature:3724496-3724678:1:exon
so has part: feature:3727023-3727202:1:exon
so has part: feature:3727829-3727912:1:exon
so has part: feature:3729320-3729420:1:exon
so has part: feature:3730614-3730815:1:exon

XP_032741949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3672564-3672622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3678963-3679188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3681908-3682060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3682855-3683251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3689425-3689667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3693733-3693795:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3694796-3694996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3695471-3695583:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3696555-3696643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3707452-3707612:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3708957-3709013:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3709159-3709225:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3710230-3710280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3711560-3711695:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3712472-3712561:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3718096-3718214:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3720349-3720499:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3724496-3724678:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3727023-3727202:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3727829-3727912:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3729320-3729420:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3730614-3730815:1:exon

Tcerg1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Tcerg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X2
translation: MAERGGDGGEGERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGAMPPPPGMMFPPGMPPGTAPGAPALPPTEEIWVENKTPDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAAQAQAQAQAQAQAQAQAQAQAQVQAQAVGAPTPTTSSPAPAVSTSAPTSTPSSTTATTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSAPAPTATPVQTVPQPHPQTLPPAVPHSVPQPAAAIPAFPPVMVPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVAIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLDEKIKEPIKEASEEPLPMETEEEDPKEEPIKEIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGLEDMKKLRHPAPTMLSIQKWQFSMSAIKEEQELMEEMNEDEPIKAKKRKRDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVAYVDDLDRRGPPPPPTASEPTRRSTK
SIO_010081: Tcerg1
subclass of: SO_0000673
so part of: Tcerg1
location: join(3672564..3672622,3678963..3679188,3681908..3682060,3682855..3683251,3689425..3689667,3693733..3693795,3694796..3694996,3695471..3695583,3696555..3696643,3707452..3707612,3708957..3709013,3709159..3709225,3711560..3711695,3712472..3712561,3718096..3718214,3720349..3720499,3723925..3724089,3724496..3724678,3727023..3727202,3727829..3727912,3729320..3729420,3730614..3730815)
location: region:3672564-3730815:1
so has part: feature:3672564-3672622:1:exon
so has part: feature:3678963-3679188:1:exon
so has part: feature:3681908-3682060:1:exon
so has part: feature:3682855-3683251:1:exon
so has part: feature:3689425-3689667:1:exon
so has part: feature:3693733-3693795:1:exon
so has part: feature:3694796-3694996:1:exon
so has part: feature:3695471-3695583:1:exon
so has part: feature:3696555-3696643:1:exon
so has part: feature:3707452-3707612:1:exon
so has part: feature:3708957-3709013:1:exon
so has part: feature:3709159-3709225:1:exon
so has part: feature:3711560-3711695:1:exon
so has part: feature:3712472-3712561:1:exon
so has part: feature:3718096-3718214:1:exon
so has part: feature:3720349-3720499:1:exon
so has part: feature:3723925-3724089:1:exon
so has part: feature:3724496-3724678:1:exon
so has part: feature:3727023-3727202:1:exon
so has part: feature:3727829-3727912:1:exon
so has part: feature:3729320-3729420:1:exon
so has part: feature:3730614-3730815:1:exon

XP_032741946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3672564-3672622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3678963-3679188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3681908-3682060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3682855-3683251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3689425-3689667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3693733-3693795:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3694796-3694996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3695471-3695583:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3696555-3696643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3707452-3707612:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3708957-3709013:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3709159-3709225:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3711560-3711695:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3712472-3712561:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3718096-3718214:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3720349-3720499:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3723925-3724089:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3724496-3724678:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3727023-3727202:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3727829-3727912:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3729320-3729420:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3730614-3730815:1:exon

Tcerg1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Tcerg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X3
translation: MAERGGDGGEGERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGAMPPPPGMMFPPGMPPGTAPGAPALPPTEEIWVENKTPDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAAQAQAQAQAQAQAQAQAQAQAQVQAQAVGAPTPTTSSPAPAVSTSAPTSTPSSTTATTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSAPAPTATPVQTVPQPHPQTLPPAVPHSVPQPAAAIPAFPPVMVPPFRVPLPGMPIPLPGVLPGMAPPIVPMIHPQVAIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLDEKIKEPIKEASEEPLPMETEEEDPKEEPIKEIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGLEDMKKLRHPAPTMLSIQKWQFSMSAIKEEQELMEEMNEDEPIKAKKRKRMSKKPFMWIARASLFRRDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVAYVDDLDRRGPPPPPTASEPTRRSTK
SIO_010081: Tcerg1
subclass of: SO_0000673
so part of: Tcerg1
location: join(3672564..3672622,3678963..3679188,3681908..3682060,3682855..3683251,3689425..3689667,3694796..3694996,3695471..3695583,3696555..3696643,3707452..3707612,3708957..3709013,3709159..3709225,3710230..3710280,3711560..3711695,3712472..3712561,3718096..3718214,3720349..3720499,3723925..3724089,3724496..3724678,3727023..3727202,3727829..3727912,3729320..3729420,3730614..3730815)
location: region:3672564-3730815:1
so has part: feature:3672564-3672622:1:exon
so has part: feature:3678963-3679188:1:exon
so has part: feature:3681908-3682060:1:exon
so has part: feature:3682855-3683251:1:exon
so has part: feature:3689425-3689667:1:exon
so has part: feature:3694796-3694996:1:exon
so has part: feature:3695471-3695583:1:exon
so has part: feature:3696555-3696643:1:exon
so has part: feature:3707452-3707612:1:exon
so has part: feature:3708957-3709013:1:exon
so has part: feature:3709159-3709225:1:exon
so has part: feature:3710230-3710280:1:exon
so has part: feature:3711560-3711695:1:exon
so has part: feature:3712472-3712561:1:exon
so has part: feature:3718096-3718214:1:exon
so has part: feature:3720349-3720499:1:exon
so has part: feature:3723925-3724089:1:exon
so has part: feature:3724496-3724678:1:exon
so has part: feature:3727023-3727202:1:exon
so has part: feature:3727829-3727912:1:exon
so has part: feature:3729320-3729420:1:exon
so has part: feature:3730614-3730815:1:exon

XP_032741947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3672564-3672622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3678963-3679188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3681908-3682060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3682855-3683251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3689425-3689667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3694796-3694996:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3695471-3695583:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3696555-3696643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3707452-3707612:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3708957-3709013:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3709159-3709225:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3710230-3710280:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3711560-3711695:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3712472-3712561:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3718096-3718214:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3720349-3720499:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3723925-3724089:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3724496-3724678:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3727023-3727202:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3727829-3727912:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3729320-3729420:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3730614-3730815:1:exon

Tcerg1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Tcerg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X4
translation: MAERGGDGGEGERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGAMPPPPGMMFPPGMPPGTAPGAPALPPTEEIWVENKTPDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAAQAQAQAQAQAQAQAQAQAQAQVQAQAVGAPTPTTSSPAPAVSTSAPTSTPSSTTATTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSAPAPTATPVQTVPQPHPQTLPPAVPHSVPQPAAAIPAFPPVMVPPFRVPLPGMPIPLPGVLPGMAPPIVPMIHPQVAIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLDEKIKEPIKEASEEPLPMETEEEDPKEEPIKEIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGLEDMKKLRHPAPTMLSIQKWQFSMSAIKEEQELMEEMNEDEPIKAKKRKRDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVAYVDDLDRRGPPPPPTASEPTRRSTK
SIO_010081: Tcerg1
subclass of: SO_0000673
so part of: Tcerg1
location: join(3672564..3672622,3678963..3679188,3681908..3682060,3682855..3683251,3689425..3689667,3694796..3694996,3695471..3695583,3696555..3696643,3707452..3707612,3708957..3709013,3709159..3709225,3711560..3711695,3712472..3712561,3718096..3718214,3720349..3720499,3723925..3724089,3724496..3724678,3727023..3727202,3727829..3727912,3729320..3729420,3730614..3730815)
location: region:3672564-3730815:1
so has part: feature:3672564-3672622:1:exon
so has part: feature:3678963-3679188:1:exon
so has part: feature:3681908-3682060:1:exon
so has part: feature:3682855-3683251:1:exon
so has part: feature:3689425-3689667:1:exon
so has part: feature:3694796-3694996:1:exon
so has part: feature:3695471-3695583:1:exon
so has part: feature:3696555-3696643:1:exon
so has part: feature:3707452-3707612:1:exon
so has part: feature:3708957-3709013:1:exon
so has part: feature:3709159-3709225:1:exon
so has part: feature:3711560-3711695:1:exon
so has part: feature:3712472-3712561:1:exon
so has part: feature:3718096-3718214:1:exon
so has part: feature:3720349-3720499:1:exon
so has part: feature:3723925-3724089:1:exon
so has part: feature:3724496-3724678:1:exon
so has part: feature:3727023-3727202:1:exon
so has part: feature:3727829-3727912:1:exon
so has part: feature:3729320-3729420:1:exon
so has part: feature:3730614-3730815:1:exon

XP_032741948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3672564-3672622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3678963-3679188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3681908-3682060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3682855-3683251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3689425-3689667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3694796-3694996:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3695471-3695583:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3696555-3696643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3707452-3707612:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3708957-3709013:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3709159-3709225:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3711560-3711695:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3712472-3712561:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3718096-3718214:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3720349-3720499:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3723925-3724089:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3724496-3724678:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3727023-3727202:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3727829-3727912:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3729320-3729420:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3730614-3730815:1:exon

Tcerg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Tcerg1
product: transcription elongation regulator 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 113 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032886059.1
SIO_010081: Tcerg1
subclass of: SO_0000673
so part of: Tcerg1
location: join(3687817..3688186,3689425..3689667,3693733..3693795,3694796..3694996,3695471..3695583,3696555..3696643,3707452..3707612,3708957..3709013,3709159..3709225,3710230..3710280,3711560..3711695,3712472..3712561,3718096..3718214,3720349..3720499,3723925..3724089,3724496..3724678,3727023..3727202,3727829..3727912,3729320..3729420,3730614..3731672)
location: region:3687817-3731672:1
so has part: feature:3687817-3688186:1:exon
so has part: feature:3689425-3689667:1:exon
so has part: feature:3693733-3693795:1:exon
so has part: feature:3694796-3694996:1:exon
so has part: feature:3695471-3695583:1:exon
so has part: feature:3696555-3696643:1:exon
so has part: feature:3707452-3707612:1:exon
so has part: feature:3708957-3709013:1:exon
so has part: feature:3709159-3709225:1:exon
so has part: feature:3710230-3710280:1:exon
so has part: feature:3711560-3711695:1:exon
so has part: feature:3712472-3712561:1:exon
so has part: feature:3718096-3718214:1:exon
so has part: feature:3720349-3720499:1:exon
so has part: feature:3723925-3724089:1:exon
so has part: feature:3724496-3724678:1:exon
so has part: feature:3727023-3727202:1:exon
so has part: feature:3727829-3727912:1:exon
so has part: feature:3729320-3729420:1:exon
so has part: feature:3730614-3731672:1:exon

position:3687817:1
position: 3687817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3687817-3688186:1:exon

position:3688186:1
position: 3688186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3689425-3689667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3693733-3693795:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3694796-3694996:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3695471-3695583:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3696555-3696643:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3707452-3707612:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3708957-3709013:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3709159-3709225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3710230-3710280:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3711560-3711695:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3712472-3712561:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3718096-3718214:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3720349-3720499:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3723925-3724089:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3724496-3724678:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3727023-3727202:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3727829-3727912:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3729320-3729420:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3730614-3731672:1:exon

Tcerg1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Tcerg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X6
translation: MLHVLCLFHTVINYINMILYPKTRSMLDQQFIPGPLKILLWPCCLFSQAPTTQDQTPSSAVSVATPTVSVSAPAPTATPVQTVPQPHPQTLPPAVPHSVPQPAAAIPAFPPVMVPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVAIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLDEKIKEPIKEASEEPLPMETEEEDPKEEPIKEIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGLEDMKKLRHPAPTMLSIQKWQFSMSAIKEEQELMEEMNEDEPIKAKKRKRMSKKPFMWIARASLFRRDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVAYVDDLDRRGPPPPPTASEPTRRSTK
SIO_010081: Tcerg1
subclass of: SO_0000673
so part of: Tcerg1
location: join(3688042..3688186,3689425..3689667,3693733..3693795,3694796..3694996,3695471..3695583,3696555..3696643,3707452..3707612,3708957..3709013,3709159..3709225,3710230..3710280,3711560..3711695,3712472..3712561,3718096..3718214,3720349..3720499,3723925..3724089,3724496..3724678,3727023..3727202,3727829..3727912,3729320..3729420,3730614..3730815)
location: region:3688042-3730815:1
so has part: feature:3688042-3688186:1:exon
so has part: feature:3689425-3689667:1:exon
so has part: feature:3693733-3693795:1:exon
so has part: feature:3694796-3694996:1:exon
so has part: feature:3695471-3695583:1:exon
so has part: feature:3696555-3696643:1:exon
so has part: feature:3707452-3707612:1:exon
so has part: feature:3708957-3709013:1:exon
so has part: feature:3709159-3709225:1:exon
so has part: feature:3710230-3710280:1:exon
so has part: feature:3711560-3711695:1:exon
so has part: feature:3712472-3712561:1:exon
so has part: feature:3718096-3718214:1:exon
so has part: feature:3720349-3720499:1:exon
so has part: feature:3723925-3724089:1:exon
so has part: feature:3724496-3724678:1:exon
so has part: feature:3727023-3727202:1:exon
so has part: feature:3727829-3727912:1:exon
so has part: feature:3729320-3729420:1:exon
so has part: feature:3730614-3730815:1:exon

XP_032741950.1
type: Protein
SIO_000068: ncbiprotein

position:3688042:1
position: 3688042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3688042-3688186:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3689425-3689667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3693733-3693795:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3694796-3694996:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3695471-3695583:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3696555-3696643:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3707452-3707612:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3708957-3709013:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3709159-3709225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3710230-3710280:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3711560-3711695:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3712472-3712561:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3718096-3718214:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3720349-3720499:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3723925-3724089:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3724496-3724678:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3727023-3727202:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3727829-3727912:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3729320-3729420:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3730614-3730815:1:exon

Gpr151
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Gpr151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3733983..3735745)
location: region:3733983-3735745:-1
so has part: feature:3733983-3735745:-1:exon
subclass of: SO_0000010

116884788
type: Gene
SIO_000068: ncbigene

position:3733983:-1
position: 3733983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3735745:-1
position: 3735745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3733983-3735745:-1:exon

Gpr151
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Gpr151
product: G protein-coupled receptor 151
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 6 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886021.1
SIO_010081: Gpr151
subclass of: SO_0000673
so part of: Gpr151
location: complement(3733983..3735745)
location: region:3733983-3735745:-1
so has part: feature:3733983-3735745:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3733983-3735745:-1:exon

Gpr151
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Gpr151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 151
translation: MGKATLAVFADSDSSNMNESFAHLHFAGGYLPSDSKGWRTIIPSLLAAVCLVGFVGNLCVIGLLLHGVWKRKPSMIHSLILNLSLADISLLLFSAPVRATAYVKGVWDLGWFVCKSSDWFTHMCMAAKSLTFVVVAKVCFMYASDPAKPVGTHNCTIWSLLGAIWVVASLLPLPEWFFSTTRHHAGVEMCLVDVPAVAAEFMSLFGKLYPLLVFCLPLLLAGFYFWRAYNQCKIRCAKTQNLRNQMRSKQLTVMLLSTAVTSALLWLPEWIAWLWVWHLKAGGPMPPQGFIALSQVLMFSISTVNPLIFLMMSEEFKGGLKGIWKWMITRKPVVTSEVQEVPAGNIETLPGKAPSPETQTCIPDTDRCGSPDSSKETTDKVMVPILPDVEQFWHERDVVPSAQDNDPIPWEHEGQETKGCN
SIO_010081: Gpr151
subclass of: SO_0000673
so part of: Gpr151
location: complement(3734443..3735708)
location: region:3734443-3735708:-1
so has part: feature:3734443-3735708:-1:exon

XP_032741912.1
type: Protein
SIO_000068: ncbiprotein

position:3734443:-1
position: 3734443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3735708:-1
position: 3735708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3734443-3735708:-1:exon

LOC116884902
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3759365..3760333
location: region:3759365-3760333:1
so has part: feature:3759365-3760333:1:exon

116884902
type: Gene
SIO_000068: ncbigene

position:3759365:1
position: 3759365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3760333:1
position: 3760333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3759365-3760333:1:exon

LOC116884902
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884902
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC116884902
subclass of: SO_0000673
so part of: LOC116884902
location: 3759365..3759594
location: region:3759365-3759594:1
so has part: feature:3759365-3759594:1:exon

position:3759594:1
position: 3759594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3759365-3759594:1:exon

LOC116884902
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884902
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC116884902
subclass of: SO_0000673
so part of: LOC116884902
location: 3760084..3760333
location: region:3760084-3760333:1
so has part: feature:3760084-3760333:1:exon

position:3760084:1
position: 3760084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3760084-3760333:1:exon

LOC116884903
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3773629..3774610)
location: region:3773629-3774610:-1
so has part: feature:3773629-3774610:-1:exon

116884903
type: Gene
SIO_000068: ncbigene

position:3773629:-1
position: 3773629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3774610:-1
position: 3774610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3773629-3774610:-1:exon

LOC116884903
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884903
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116884903
subclass of: SO_0000673
so part of: LOC116884903
location: complement(3773629..3773870)
location: region:3773629-3773870:-1
so has part: feature:3773629-3773870:-1:exon

position:3773870:-1
position: 3773870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3773629-3773870:-1:exon

LOC116884903
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884903
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116884903
subclass of: SO_0000673
so part of: LOC116884903
location: complement(3774239..3774610)
location: region:3774239-3774610:-1
so has part: feature:3774239-3774610:-1:exon

position:3774239:-1
position: 3774239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3774239-3774610:-1:exon

LOC116885026
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116885026
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(3881437..3881577)
location: region:3881437-3881577:-1
so has part: feature:3881437-3881577:-1:exon

116885026
type: Gene
SIO_000068: ncbigene

position:3881437:-1
position: 3881437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3881577:-1
position: 3881577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3881437-3881577:-1:exon

LOC116885026
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116885026
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00413
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116885026
subclass of: SO_0000673
so part of: LOC116885026
location: complement(3881437..3881577)
location: region:3881437-3881577:-1
so has part: feature:3881437-3881577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3881437-3881577:-1:exon

LOC116884904
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4140569..4145064
location: region:4140569-4145064:1
so has part: feature:4140569-4145064:1:exon

116884904
type: Gene
SIO_000068: ncbigene

position:4140569:1
position: 4140569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4145064:1
position: 4145064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4140569-4145064:1:exon

LOC116884904
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884904
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116884904
subclass of: SO_0000673
so part of: LOC116884904
location: 4140569..4140635
location: region:4140569-4140635:1
so has part: feature:4140569-4140635:1:exon

position:4140635:1
position: 4140635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4140569-4140635:1:exon

LOC116884904
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884904
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116884904
subclass of: SO_0000673
so part of: LOC116884904
location: 4140931..4141070
location: region:4140931-4141070:1
so has part: feature:4140931-4141070:1:exon

position:4140931:1
position: 4140931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4141070:1
position: 4141070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4140931-4141070:1:exon

LOC116884904
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884904
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116884904
subclass of: SO_0000673
so part of: LOC116884904
location: 4143393..4145064
location: region:4143393-4145064:1
so has part: feature:4143393-4145064:1:exon

position:4143393:1
position: 4143393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4143393-4145064:1:exon

Kctd16
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Kctd16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4446309..4703033)
location: region:4446309-4703033:-1
so has part: feature:4446309-4703033:-1:exon
subclass of: SO_0000010

116884958
type: Gene
SIO_000068: ncbigene

position:4446309:-1
position: 4446309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4703033:-1
position: 4703033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4446309-4703033:-1:exon

Kctd16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Kctd16
product: potassium channel tetramerization domain containing 16, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032886160.1
SIO_010081: Kctd16
subclass of: SO_0000673
so part of: Kctd16
location: complement(join(4446309..4448238,4700060..4701235,4702858..4703033))
location: region:4446309-4703033:-1
so has part: feature:4702858-4703033:-1:exon
so has part: feature:4700060-4701235:-1:exon
so has part: feature:4446309-4448238:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4702858-4703033:-1:exon

position:4702858:-1
position: 4702858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4700060-4701235:-1:exon

position:4700060:-1
position: 4700060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4701235:-1
position: 4701235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4446309-4448238:-1:exon

position:4448238:-1
position: 4448238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Kctd16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Kctd16
product: potassium channel tetramerization domain containing 16, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032886161.1
SIO_010081: Kctd16
subclass of: SO_0000673
so part of: Kctd16
location: complement(join(4446309..4448238,4700060..4701235,4701935..4702382))
location: region:4446309-4702382:-1
so has part: feature:4701935-4702382:-1:exon
so has part: feature:4700060-4701235:-1:exon
so has part: feature:4446309-4448238:-1:exon

position:4702382:-1
position: 4702382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4701935-4702382:-1:exon

position:4701935:-1
position: 4701935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4700060-4701235:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4446309-4448238:-1:exon

Kctd16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Kctd16
product: potassium channel tetramerization domain containing 16, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032886159.1
SIO_010081: Kctd16
subclass of: SO_0000673
so part of: Kctd16
location: complement(join(4446309..4448238,4700060..4702382))
location: region:4446309-4702382:-1
so has part: feature:4700060-4702382:-1:exon
so has part: feature:4446309-4448238:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4700060-4702382:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4446309-4448238:-1:exon

Kctd16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Kctd16
product: potassium channel tetramerization domain containing 16, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032886158.1
SIO_010081: Kctd16
subclass of: SO_0000673
so part of: Kctd16
location: complement(join(4446444..4448238,4700060..4701235,4701564..4702382))
location: region:4446444-4702382:-1
so has part: feature:4701564-4702382:-1:exon
so has part: feature:4700060-4701235:-1:exon
so has part: feature:4446444-4448238:-1:exon

position:4446444:-1
position: 4446444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4701564-4702382:-1:exon

position:4701564:-1
position: 4701564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4700060-4701235:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4446444-4448238:-1:exon

Kctd16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Kctd16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD16
translation: MALSGNCSRYYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLVKLLAPEEVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGSCTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDKGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQGNIQTLDRPIKKGPVQLIQQSEMRRKSDLLRTLTSGSRESNISSKKKAAKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQSELLRKYHL
SIO_010081: Kctd16
subclass of: SO_0000673
so part of: Kctd16
location: complement(join(4447787..4448238,4700060..4700891))
location: region:4447787-4700891:-1
so has part: feature:4700060-4700891:-1:exon
so has part: feature:4447787-4448238:-1:exon

XP_032742049.1
type: Protein
SIO_000068: ncbiprotein

position:4447787:-1
position: 4447787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4700891:-1
position: 4700891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4700060-4700891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4447787-4448238:-1:exon

Kctd16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Kctd16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD16
translation: MALSGNCSRYYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLVKLLAPEEVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGSCTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDKGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQGNIQTLDRPIKKGPVQLIQQSEMRRKSDLLRTLTSGSRESNISSKKKAAKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQSELLRKYHL
SIO_010081: Kctd16
subclass of: SO_0000673
so part of: Kctd16
location: complement(join(4447787..4448238,4700060..4700891))
location: region:4447787-4700891:-1
so has part: feature:4700060-4700891:-1:exon
so has part: feature:4447787-4448238:-1:exon

XP_032742050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4700060-4700891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4447787-4448238:-1:exon

Kctd16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Kctd16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD16
translation: MALSGNCSRYYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLVKLLAPEEVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGSCTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDKGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQGNIQTLDRPIKKGPVQLIQQSEMRRKSDLLRTLTSGSRESNISSKKKAAKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQSELLRKYHL
SIO_010081: Kctd16
subclass of: SO_0000673
so part of: Kctd16
location: complement(join(4447787..4448238,4700060..4700891))
location: region:4447787-4700891:-1
so has part: feature:4700060-4700891:-1:exon
so has part: feature:4447787-4448238:-1:exon

XP_032742051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4700060-4700891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4447787-4448238:-1:exon

Kctd16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Kctd16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD16
translation: MALSGNCSRYYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYFQLPDLVKLLAPEEVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGSCTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDKGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQGNIQTLDRPIKKGPVQLIQQSEMRRKSDLLRTLTSGSRESNISSKKKAAKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQSELLRKYHL
SIO_010081: Kctd16
subclass of: SO_0000673
so part of: Kctd16
location: complement(join(4447787..4448238,4700060..4700891))
location: region:4447787-4700891:-1
so has part: feature:4700060-4700891:-1:exon
so has part: feature:4447787-4448238:-1:exon

XP_032742052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4700060-4700891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4447787-4448238:-1:exon

LOC116884874
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4562087..4562593
location: region:4562087-4562593:1
so has part: feature:4562087-4562593:1:exon

116884874
type: Gene
SIO_000068: ncbigene

position:4562087:1
position: 4562087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4562593:1
position: 4562593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4562087-4562593:1:exon

LOC116884874
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884874
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116884874
subclass of: SO_0000673
so part of: LOC116884874
location: 4562087..4562593
location: region:4562087-4562593:1
so has part: feature:4562087-4562593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4562087-4562593:1:exon

LOC116884712
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884712
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4725559..4732152
location: region:4725559-4732152:1
so has part: feature:4725559-4732152:1:exon
subclass of: SO_0000011

116884712
type: Gene
SIO_000068: ncbigene

position:4725559:1
position: 4725559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4732152:1
position: 4732152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4725559-4732152:1:exon

LOC116884712
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10117
nc RNA class: lncRNA
gene: LOC116884712
product: uncharacterized LOC116884712
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004385889.1
SIO_010081: LOC116884712
subclass of: SO_0000673
so part of: LOC116884712
location: join(4725559..4725661,4727235..4727322,4732040..4732152)
location: region:4725559-4732152:1
so has part: feature:4725559-4725661:1:exon
so has part: feature:4727235-4727322:1:exon
so has part: feature:4732040-4732152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4725559-4725661:1:exon

position:4725661:1
position: 4725661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4727235-4727322:1:exon

position:4727235:1
position: 4727235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4727322:1
position: 4727322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4732040-4732152:1:exon

position:4732040:1
position: 4732040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Yipf5
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Yipf5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4733754..4746669
location: region:4733754-4746669:1
so has part: feature:4733754-4746669:1:exon
subclass of: SO_0000010

116884514
type: Gene
SIO_000068: ncbigene

position:4733754:1
position: 4733754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4746669:1
position: 4746669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4733754-4746669:1:exon

Yipf5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Yipf5
product: Yip1 domain family member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 73 ESTs, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032885643.1
SIO_010081: Yipf5
subclass of: SO_0000673
so part of: Yipf5
location: join(4733754..4733948,4734326..4734445,4740133..4740305,4741469..4741614,4744365..4744546,4745688..4746669)
location: region:4733754-4746669:1
so has part: feature:4733754-4733948:1:exon
so has part: feature:4734326-4734445:1:exon
so has part: feature:4740133-4740305:1:exon
so has part: feature:4741469-4741614:1:exon
so has part: feature:4744365-4744546:1:exon
so has part: feature:4745688-4746669:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4733754-4733948:1:exon

position:4733948:1
position: 4733948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4734326-4734445:1:exon

position:4734326:1
position: 4734326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4734445:1
position: 4734445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4740133-4740305:1:exon

position:4740133:1
position: 4740133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4740305:1
position: 4740305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4741469-4741614:1:exon

position:4741469:1
position: 4741469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4741614:1
position: 4741614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4744365-4744546:1:exon

position:4744365:1
position: 4744365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4744546:1
position: 4744546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4745688-4746669:1:exon

position:4745688:1
position: 4745688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Yipf5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Yipf5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein YIPF5
translation: MSGFDNLNSGFYQTSYSIDEQSQQSYDYGGSGGPYSKQYAGCEYSQQGRFVPPDMMQPQQTYTGQIYQPTQAYPPPTPQTFYGDSFEEEPPLLEELGINFDHIWQKTLTVLHPLRASDGSIMNETDLAGPVVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSSFAVVFSLQGMVGILLTATIIGWCSFSASKIFISALAMDGQQLLVAYPCALLYGVFALISVF
SIO_010081: Yipf5
subclass of: SO_0000673
so part of: Yipf5
location: join(4734336..4734445,4740133..4740305,4741469..4741614,4744365..4744546,4745688..4745850)
location: region:4734336-4745850:1
so has part: feature:4734336-4734445:1:exon
so has part: feature:4740133-4740305:1:exon
so has part: feature:4741469-4741614:1:exon
so has part: feature:4744365-4744546:1:exon
so has part: feature:4745688-4745850:1:exon

XP_032741534.1
type: Protein
SIO_000068: ncbiprotein

position:4734336:1
position: 4734336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4745850:1
position: 4745850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4734336-4734445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4740133-4740305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4741469-4741614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4744365-4744546:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4745688-4745850:1:exon

LOC116884714
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884714
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5152586..5154846)
location: region:5152586-5154846:-1
so has part: feature:5152586-5154846:-1:exon
subclass of: SO_0000010

116884714
type: Gene
SIO_000068: ncbigene

position:5152586:-1
position: 5152586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5154846:-1
position: 5154846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5152586-5154846:-1:exon

LOC116884714
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884714
product: polyadenylate-binding protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 30 Proteins
transcript id: XM_032885900.1
SIO_010081: LOC116884714
subclass of: SO_0000673
so part of: LOC116884714
location: complement(5152586..5154846)
location: region:5152586-5154846:-1
so has part: feature:5152586-5154846:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5152586-5154846:-1:exon

LOC116884714
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884714
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein 1-like
translation: MNSSDPGCPMASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVCDENGSKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGTRTKEFTNVYIKNFGDRMDDKTLNGLFGRFGQVLSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGPAQKKVDRHIELKRKFEQVTQDRGIRYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQRKEERQAHLTNQYIQRMASVRSGPNSLINAYQPAPSGYSVAAVPQTQNCAPCCPSQIVQPSPSARWTAQGARPHPFPSVSGAIHPAAPKSSFTTVRPSSSHVPQVMAAQRITNTSAQTTGQRPALASSAATTPVRSIPQYKYATGVRNSQQHLNAQLVQQPSVCIQGQEPWTASTLGTAPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEPLHMLDSPESLCSRAQEAVSVLQAHQANEAAQKAAGSTSGVPTV
SIO_010081: LOC116884714
subclass of: SO_0000673
so part of: LOC116884714
location: complement(5152954..5154846)
location: region:5152954-5154846:-1
so has part: feature:5152954-5154846:-1:exon

XP_032741791.1
type: Protein
SIO_000068: ncbiprotein

position:5152954:-1
position: 5152954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5152954-5154846:-1:exon

Nr3c1
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Nr3c1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5431948..5522978
location: region:5431948-5522978:1
so has part: feature:5431948-5522978:1:exon
subclass of: SO_0000010

116884713
type: Gene
SIO_000068: ncbigene

position:5431948:1
position: 5431948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5522978:1
position: 5522978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5431948-5522978:1:exon

Nr3c1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Nr3c1
product: nuclear receptor subfamily 3 group C member 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 60 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032885898.1
SIO_010081: Nr3c1
subclass of: SO_0000673
so part of: Nr3c1
location: join(5431948..5432289,5434507..5435735,5501428..5501594,5505679..5505795,5508139..5508414,5509356..5509500,5512941..5513071,5517682..5517839,5518918..5522978)
location: region:5431948-5522978:1
so has part: feature:5431948-5432289:1:exon
so has part: feature:5434507-5435735:1:exon
so has part: feature:5501428-5501594:1:exon
so has part: feature:5505679-5505795:1:exon
so has part: feature:5508139-5508414:1:exon
so has part: feature:5509356-5509500:1:exon
so has part: feature:5512941-5513071:1:exon
so has part: feature:5517682-5517839:1:exon
so has part: feature:5518918-5522978:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5431948-5432289:1:exon

position:5432289:1
position: 5432289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5434507-5435735:1:exon

position:5434507:1
position: 5434507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5435735:1
position: 5435735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5501428-5501594:1:exon

position:5501428:1
position: 5501428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5501594:1
position: 5501594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5505679-5505795:1:exon

position:5505679:1
position: 5505679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5505795:1
position: 5505795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5508139-5508414:1:exon

position:5508139:1
position: 5508139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5508414:1
position: 5508414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5509356-5509500:1:exon

position:5509356:1
position: 5509356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5509500:1
position: 5509500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5512941-5513071:1:exon

position:5512941:1
position: 5512941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5513071:1
position: 5513071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5517682-5517839:1:exon

position:5517682:1
position: 5517682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5517839:1
position: 5517839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5518918-5522978:1:exon

position:5518918:1
position: 5518918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nr3c1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Nr3c1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: glucocorticoid receptor
translation: MDSKESLAPPGRDEVPGSLLGQGRGNVMDFYKSLRGGATVKVSASSPSVAAASQADSKQQRILLDFSKGSTSNVQQLQQQQQQQQQQPDLSKAVSLSMGLYMGETETKVMGNDLGYPQQGQLGLSSGXTDFRLLEESIANLNRSTSVPENPKSSTSATGCATPTEKEFPKTHSDASSEQQNRKSQTGTNGGSVKLYPTDQSTFDILKDLEFSAGSPGKDTNESPWRSDLLIDENLLSPLAGEDDPFLLEGDTNEDCKPLILPDTKPKIKDTGDTILSSPSSVALPQVKTEKDDFIELCTPGVIKQEKLGPVYCQASFSGTNIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPVFNVIPPIPVGSENWNRCQGSGEDGLTSLGALNFPGRSVFSNGYSSPGMRPDVSSPPSSSSAATGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGRQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQATAGVSQDTSENPNKTIVPAALPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSAWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQASGNLLCFAPDLIINEQRMSLPCMYDQCKHMLFVSSELQRLQVSYEEYLCMKTLLLLSSVPKEGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHDVVENLLTYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK
SIO_010081: Nr3c1
subclass of: SO_0000673
so part of: Nr3c1
location: join(5434520..5435735,5501428..5501594,5505679..5505795,5508139..5508414,5509356..5509500,5512941..5513071,5517682..5517839,5518918..5519070)
location: region:5434520-5519070:1
so has part: feature:5434520-5435735:1:exon
so has part: feature:5501428-5501594:1:exon
so has part: feature:5505679-5505795:1:exon
so has part: feature:5508139-5508414:1:exon
so has part: feature:5509356-5509500:1:exon
so has part: feature:5512941-5513071:1:exon
so has part: feature:5517682-5517839:1:exon
so has part: feature:5518918-5519070:1:exon

XP_032741789.1
type: Protein
SIO_000068: ncbiprotein

position:5434520:1
position: 5434520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5519070:1
position: 5519070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5434520-5435735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5501428-5501594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5505679-5505795:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5508139-5508414:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5509356-5509500:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5512941-5513071:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5517682-5517839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5518918-5519070:1:exon

LOC116884328
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884328
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5542763..5561579
location: region:5542763-5561579:1
so has part: feature:5542763-5561579:1:exon
subclass of: SO_0000011

116884328
type: Gene
SIO_000068: ncbigene

position:5542763:1
position: 5542763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5561579:1
position: 5561579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5542763-5561579:1:exon

LOC116884328
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10117
nc RNA class: lncRNA
gene: LOC116884328
product: uncharacterized LOC116884328
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004385866.1
SIO_010081: LOC116884328
subclass of: SO_0000673
so part of: LOC116884328
location: join(5542763..5542963,5549886..5550060,5558438..5561579)
location: region:5542763-5561579:1
so has part: feature:5542763-5542963:1:exon
so has part: feature:5549886-5550060:1:exon
so has part: feature:5558438-5561579:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5542763-5542963:1:exon

position:5542963:1
position: 5542963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5549886-5550060:1:exon

position:5549886:1
position: 5549886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5550060:1
position: 5550060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5558438-5561579:1:exon

position:5558438:1
position: 5558438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Arhgap26
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Arhgap26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5561615..5948168)
location: region:5561615-5948168:-1
so has part: feature:5561615-5948168:-1:exon
subclass of: SO_0000010

116884329
type: Gene
SIO_000068: ncbigene

position:5561615:-1
position: 5561615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5948168:-1
position: 5948168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5561615-5948168:-1:exon

Arhgap26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Arhgap26
product: Rho GTPase activating protein 26, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032885465.1
SIO_010081: Arhgap26
subclass of: SO_0000673
so part of: Arhgap26
location: complement(join(5561615..5562549,5570112..5570203,5629671..5629821,5640528..5640666,5652067..5652226,5698308..5698413,5699886..5699944,5701730..5701817,5714908..5714982,5718612..5718677,5740008..5740044,5796692..5796770,5813119..5813213,5818218..5818318,5819967..5820096,5821431..5821535,5827376..5827486,5828775..5828876,5837500..5837571,5840949..5841010,5842815..5842910,5947656..5948168))
location: region:5561615-5948168:-1
so has part: feature:5947656-5948168:-1:exon
so has part: feature:5842815-5842910:-1:exon
so has part: feature:5840949-5841010:-1:exon
so has part: feature:5837500-5837571:-1:exon
so has part: feature:5828775-5828876:-1:exon
so has part: feature:5827376-5827486:-1:exon
so has part: feature:5821431-5821535:-1:exon
so has part: feature:5819967-5820096:-1:exon
so has part: feature:5818218-5818318:-1:exon
so has part: feature:5813119-5813213:-1:exon
so has part: feature:5796692-5796770:-1:exon
so has part: feature:5740008-5740044:-1:exon
so has part: feature:5718612-5718677:-1:exon
so has part: feature:5714908-5714982:-1:exon
so has part: feature:5701730-5701817:-1:exon
so has part: feature:5699886-5699944:-1:exon
so has part: feature:5698308-5698413:-1:exon
so has part: feature:5652067-5652226:-1:exon
so has part: feature:5640528-5640666:-1:exon
so has part: feature:5629671-5629821:-1:exon
so has part: feature:5570112-5570203:-1:exon
so has part: feature:5561615-5562549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5947656-5948168:-1:exon

position:5947656:-1
position: 5947656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5842815-5842910:-1:exon

position:5842815:-1
position: 5842815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5842910:-1
position: 5842910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5840949-5841010:-1:exon

position:5840949:-1
position: 5840949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5841010:-1
position: 5841010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5837500-5837571:-1:exon

position:5837500:-1
position: 5837500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5837571:-1
position: 5837571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5828775-5828876:-1:exon

position:5828775:-1
position: 5828775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5828876:-1
position: 5828876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5827376-5827486:-1:exon

position:5827376:-1
position: 5827376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5827486:-1
position: 5827486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5821431-5821535:-1:exon

position:5821431:-1
position: 5821431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5821535:-1
position: 5821535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5819967-5820096:-1:exon

position:5819967:-1
position: 5819967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5820096:-1
position: 5820096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5818218-5818318:-1:exon

position:5818218:-1
position: 5818218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5818318:-1
position: 5818318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5813119-5813213:-1:exon

position:5813119:-1
position: 5813119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5813213:-1
position: 5813213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5796692-5796770:-1:exon

position:5796692:-1
position: 5796692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5796770:-1
position: 5796770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5740008-5740044:-1:exon

position:5740008:-1
position: 5740008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5740044:-1
position: 5740044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5718612-5718677:-1:exon

position:5718612:-1
position: 5718612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5718677:-1
position: 5718677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5714908-5714982:-1:exon

position:5714908:-1
position: 5714908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5714982:-1
position: 5714982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5701730-5701817:-1:exon

position:5701730:-1
position: 5701730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5701817:-1
position: 5701817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5699886-5699944:-1:exon

position:5699886:-1
position: 5699886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5699944:-1
position: 5699944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5698308-5698413:-1:exon

position:5698308:-1
position: 5698308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5698413:-1
position: 5698413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5652067-5652226:-1:exon

position:5652067:-1
position: 5652067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5652226:-1
position: 5652226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5640528-5640666:-1:exon

position:5640528:-1
position: 5640528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5640666:-1
position: 5640666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5629671-5629821:-1:exon

position:5629671:-1
position: 5629671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5629821:-1
position: 5629821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5570112-5570203:-1:exon

position:5570112:-1
position: 5570112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5570203:-1
position: 5570203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5561615-5562549:-1:exon

position:5562549:-1
position: 5562549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Arhgap26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Arhgap26
product: Rho GTPase activating protein 26, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032885464.1
SIO_010081: Arhgap26
subclass of: SO_0000673
so part of: Arhgap26
location: complement(join(5561615..5562549,5570112..5570203,5575525..5575635,5629671..5629821,5640528..5640666,5652067..5652226,5698308..5698413,5699886..5699944,5701730..5701817,5714908..5714982,5718612..5718677,5740008..5740044,5796692..5796770,5813119..5813213,5818218..5818318,5819967..5820096,5821431..5821535,5827376..5827486,5828775..5828876,5837500..5837571,5840949..5841010,5842815..5842910,5947656..5948168))
location: region:5561615-5948168:-1
so has part: feature:5947656-5948168:-1:exon
so has part: feature:5842815-5842910:-1:exon
so has part: feature:5840949-5841010:-1:exon
so has part: feature:5837500-5837571:-1:exon
so has part: feature:5828775-5828876:-1:exon
so has part: feature:5827376-5827486:-1:exon
so has part: feature:5821431-5821535:-1:exon
so has part: feature:5819967-5820096:-1:exon
so has part: feature:5818218-5818318:-1:exon
so has part: feature:5813119-5813213:-1:exon
so has part: feature:5796692-5796770:-1:exon
so has part: feature:5740008-5740044:-1:exon
so has part: feature:5718612-5718677:-1:exon
so has part: feature:5714908-5714982:-1:exon
so has part: feature:5701730-5701817:-1:exon
so has part: feature:5699886-5699944:-1:exon
so has part: feature:5698308-5698413:-1:exon
so has part: feature:5652067-5652226:-1:exon
so has part: feature:5640528-5640666:-1:exon
so has part: feature:5629671-5629821:-1:exon
so has part: feature:5575525-5575635:-1:exon
so has part: feature:5570112-5570203:-1:exon
so has part: feature:5561615-5562549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5947656-5948168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5842815-5842910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5840949-5841010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5837500-5837571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5828775-5828876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5827376-5827486:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5821431-5821535:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5819967-5820096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5818218-5818318:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5813119-5813213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5796692-5796770:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5740008-5740044:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5718612-5718677:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5714908-5714982:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5701730-5701817:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5699886-5699944:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5698308-5698413:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5652067-5652226:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5640528-5640666:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5629671-5629821:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5575525-5575635:-1:exon

position:5575525:-1
position: 5575525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5575635:-1
position: 5575635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5570112-5570203:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5561615-5562549:-1:exon

Arhgap26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Arhgap26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X2
translation: MGLPALEFSDCCLDSPHFRETLKSHEAELDKTNKFIKELIKDGKSLISALKNLSSAKRKFADSLNEFKFQCIGDAETDDEMCIARSLQEFATVLRNLEDERSRMIENASEVLITPLEKFRKEQIGAAREAKKKYDKETEKYCGTLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFGDFKTQLTISIQNTRNRFEGTRSEVESLMKKMKENPLEHKTISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRDSKQITMVPFDQKSGGKGGEDESVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDSIGFSIIRKCIHAVETRGINEQGLYRIVGVNSRVQKLLSVLMDPKAASETETDICAEWEIKTVTSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQETRVSEIHSLVHRLPEKNRQMLQLLMNHLANVANNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPDVPLTNAQLHLSRKKSSDSKPPSCSERPLTLFHAVPSTEKQEQRNSIINSSLESVSSSANSILNSSSSLQPNMNSSDPSLDVVKPTRPNSLTPFRKAKALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFL
SIO_010081: Arhgap26
subclass of: SO_0000673
so part of: Arhgap26
location: complement(join(5562461..5562549,5570112..5570203,5629671..5629821,5640528..5640666,5652067..5652226,5698308..5698413,5699886..5699944,5701730..5701817,5714908..5714982,5718612..5718677,5740008..5740044,5796692..5796770,5813119..5813213,5818218..5818318,5819967..5820096,5821431..5821535,5827376..5827486,5828775..5828876,5837500..5837571,5840949..5841010,5842815..5842910,5947656..5947809))
location: region:5562461-5947809:-1
so has part: feature:5947656-5947809:-1:exon
so has part: feature:5842815-5842910:-1:exon
so has part: feature:5840949-5841010:-1:exon
so has part: feature:5837500-5837571:-1:exon
so has part: feature:5828775-5828876:-1:exon
so has part: feature:5827376-5827486:-1:exon
so has part: feature:5821431-5821535:-1:exon
so has part: feature:5819967-5820096:-1:exon
so has part: feature:5818218-5818318:-1:exon
so has part: feature:5813119-5813213:-1:exon
so has part: feature:5796692-5796770:-1:exon
so has part: feature:5740008-5740044:-1:exon
so has part: feature:5718612-5718677:-1:exon
so has part: feature:5714908-5714982:-1:exon
so has part: feature:5701730-5701817:-1:exon
so has part: feature:5699886-5699944:-1:exon
so has part: feature:5698308-5698413:-1:exon
so has part: feature:5652067-5652226:-1:exon
so has part: feature:5640528-5640666:-1:exon
so has part: feature:5629671-5629821:-1:exon
so has part: feature:5570112-5570203:-1:exon
so has part: feature:5562461-5562549:-1:exon

XP_032741356.1
type: Protein
SIO_000068: ncbiprotein

position:5562461:-1
position: 5562461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5947809:-1
position: 5947809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5947656-5947809:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5842815-5842910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5840949-5841010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5837500-5837571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5828775-5828876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5827376-5827486:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5821431-5821535:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5819967-5820096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5818218-5818318:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5813119-5813213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5796692-5796770:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5740008-5740044:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5718612-5718677:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5714908-5714982:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5701730-5701817:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5699886-5699944:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5698308-5698413:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5652067-5652226:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5640528-5640666:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5629671-5629821:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5570112-5570203:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5562461-5562549:-1:exon

Arhgap26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Arhgap26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X1
translation: MGLPALEFSDCCLDSPHFRETLKSHEAELDKTNKFIKELIKDGKSLISALKNLSSAKRKFADSLNEFKFQCIGDAETDDEMCIARSLQEFATVLRNLEDERSRMIENASEVLITPLEKFRKEQIGAAREAKKKYDKETEKYCGTLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFGDFKTQLTISIQNTRNRFEGTRSEVESLMKKMKENPLEHKTISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRDSKQITMVPFDQKSGGKGGEDESVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDSIGFSIIRKCIHAVETRGINEQGLYRIVGVNSRVQKLLSVLMDPKAASETETDICAEWEIKTVTSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQETRVSEIHSLVHRLPEKNRQMLQLLMNHLANVANNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPDVPLTNAQLHLSRKKSSDSKPPSCSERPLTLFHAVPSTEKQEQRNSIINSSLESVSSSANSILNSSSSLQPNMNSSDPSLDVVKPTRPNSLPPNPSPTSPLSPSWPMFSAPSSPMPTSSTSSDSSPISTPFRKAKALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFL
SIO_010081: Arhgap26
subclass of: SO_0000673
so part of: Arhgap26
location: complement(join(5562461..5562549,5570112..5570203,5575525..5575635,5629671..5629821,5640528..5640666,5652067..5652226,5698308..5698413,5699886..5699944,5701730..5701817,5714908..5714982,5718612..5718677,5740008..5740044,5796692..5796770,5813119..5813213,5818218..5818318,5819967..5820096,5821431..5821535,5827376..5827486,5828775..5828876,5837500..5837571,5840949..5841010,5842815..5842910,5947656..5947809))
location: region:5562461-5947809:-1
so has part: feature:5947656-5947809:-1:exon
so has part: feature:5842815-5842910:-1:exon
so has part: feature:5840949-5841010:-1:exon
so has part: feature:5837500-5837571:-1:exon
so has part: feature:5828775-5828876:-1:exon
so has part: feature:5827376-5827486:-1:exon
so has part: feature:5821431-5821535:-1:exon
so has part: feature:5819967-5820096:-1:exon
so has part: feature:5818218-5818318:-1:exon
so has part: feature:5813119-5813213:-1:exon
so has part: feature:5796692-5796770:-1:exon
so has part: feature:5740008-5740044:-1:exon
so has part: feature:5718612-5718677:-1:exon
so has part: feature:5714908-5714982:-1:exon
so has part: feature:5701730-5701817:-1:exon
so has part: feature:5699886-5699944:-1:exon
so has part: feature:5698308-5698413:-1:exon
so has part: feature:5652067-5652226:-1:exon
so has part: feature:5640528-5640666:-1:exon
so has part: feature:5629671-5629821:-1:exon
so has part: feature:5575525-5575635:-1:exon
so has part: feature:5570112-5570203:-1:exon
so has part: feature:5562461-5562549:-1:exon

XP_032741355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5947656-5947809:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5842815-5842910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5840949-5841010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5837500-5837571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5828775-5828876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5827376-5827486:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5821431-5821535:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5819967-5820096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5818218-5818318:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5813119-5813213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5796692-5796770:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5740008-5740044:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5718612-5718677:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5714908-5714982:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5701730-5701817:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5699886-5699944:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5698308-5698413:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5652067-5652226:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5640528-5640666:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5629671-5629821:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5575525-5575635:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5570112-5570203:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5562461-5562549:-1:exon

LOC116885073
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116885073
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5717024..5717164
location: region:5717024-5717164:1
so has part: feature:5717024-5717164:1:exon
subclass of: SO_0000623

116885073
type: Gene
SIO_000068: ncbigene

position:5717024:1
position: 5717024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5717164:1
position: 5717164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5717024-5717164:1:exon

LOC116885073
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10117
nc RNA class: snRNA
gene: LOC116885073
product: U4 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004385947.1
SIO_010081: LOC116885073
subclass of: SO_0000673
so part of: LOC116885073
location: 5717024..5717164
location: region:5717024-5717164:1
so has part: feature:5717024-5717164:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5717024-5717164:1:exon

LOC116884331
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884331
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5849857..5850026
location: region:5849857-5850026:1
so has part: feature:5849857-5850026:1:exon

116884331
type: Gene
SIO_000068: ncbigene

position:5849857:1
position: 5849857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5850026:1
position: 5850026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5849857-5850026:1:exon

LOC116884331
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884331
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC116884331
subclass of: SO_0000673
so part of: LOC116884331
location: 5849857..5850026
location: region:5849857-5850026:1
so has part: feature:5849857-5850026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5849857-5850026:1:exon

Fgf1
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Fgf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6070376..6094010
location: region:6070376-6094010:1
so has part: feature:6070376-6094010:1:exon
subclass of: SO_0000010

116884682
type: Gene
SIO_000068: ncbigene

position:6070376:1
position: 6070376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6094010:1
position: 6094010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6070376-6094010:1:exon

Fgf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Fgf1
product: fibroblast growth factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032885859.1
SIO_010081: Fgf1
subclass of: SO_0000673
so part of: Fgf1
location: join(6070376..6070629,6078074..6078276,6088800..6088903,6093366..6094010)
location: region:6070376-6094010:1
so has part: feature:6070376-6070629:1:exon
so has part: feature:6078074-6078276:1:exon
so has part: feature:6088800-6088903:1:exon
so has part: feature:6093366-6094010:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6070376-6070629:1:exon

position:6070629:1
position: 6070629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6078074-6078276:1:exon

position:6078074:1
position: 6078074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6078276:1
position: 6078276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6088800-6088903:1:exon

position:6088800:1
position: 6088800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6088903:1
position: 6088903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6093366-6094010:1:exon

position:6093366:1
position: 6093366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fgf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Fgf1
product: fibroblast growth factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032885860.1
SIO_010081: Fgf1
subclass of: SO_0000673
so part of: Fgf1
location: join(6070376..6070629,6078074..6078276,6088800..6088903,6093369..6094010)
location: region:6070376-6094010:1
so has part: feature:6070376-6070629:1:exon
so has part: feature:6078074-6078276:1:exon
so has part: feature:6088800-6088903:1:exon
so has part: feature:6093369-6094010:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6070376-6070629:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6078074-6078276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6088800-6088903:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6093369-6094010:1:exon

position:6093369:1
position: 6093369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fgf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Fgf1
product: fibroblast growth factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032885862.1
SIO_010081: Fgf1
subclass of: SO_0000673
so part of: Fgf1
location: join(6070376..6070629,6078074..6078276,6086384..6086545,6088800..6088888)
location: region:6070376-6088888:1
so has part: feature:6070376-6070629:1:exon
so has part: feature:6078074-6078276:1:exon
so has part: feature:6086384-6086545:1:exon
so has part: feature:6088800-6088888:1:exon

position:6088888:1
position: 6088888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6070376-6070629:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6078074-6078276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6086384-6086545:1:exon

position:6086384:1
position: 6086384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6086545:1
position: 6086545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6088800-6088888:1:exon

Fgf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Fgf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X1
translation: MAEGEITTFAALTERFNLPLGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQLSAESAGEVYIKGTETGQYLAMDTEGLLYGSQTPNEECLFLERLEENHYNTYTSKKHAEKNWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
SIO_010081: Fgf1
subclass of: SO_0000673
so part of: Fgf1
location: join(6078108..6078276,6088800..6088903,6093366..6093560)
location: region:6078108-6093560:1
so has part: feature:6078108-6078276:1:exon
so has part: feature:6088800-6088903:1:exon
so has part: feature:6093366-6093560:1:exon

XP_032741750.1
type: Protein
SIO_000068: ncbiprotein

position:6078108:1
position: 6078108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6093560:1
position: 6093560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6078108-6078276:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6088800-6088903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6093366-6093560:1:exon

Fgf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Fgf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X2
translation: MAEGEITTFAALTERFNLPLGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQLSAESAGEVYIKGTETGQYLAMDTEGLLYGSTPNEECLFLERLEENHYNTYTSKKHAEKNWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
SIO_010081: Fgf1
subclass of: SO_0000673
so part of: Fgf1
location: join(6078108..6078276,6088800..6088903,6093369..6093560)
location: region:6078108-6093560:1
so has part: feature:6078108-6078276:1:exon
so has part: feature:6088800-6088903:1:exon
so has part: feature:6093369-6093560:1:exon

XP_032741751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6078108-6078276:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6088800-6088903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6093369-6093560:1:exon

Fgf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Fgf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X3
translation: MAEGEITTFAALTERFNLPLGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHTPFTEMSVQETQPERNPVKMSYETWTSWRNNISRGNS
SIO_010081: Fgf1
subclass of: SO_0000673
so part of: Fgf1
location: join(6078108..6078276,6086384..6086496)
location: region:6078108-6086496:1
so has part: feature:6078108-6078276:1:exon
so has part: feature:6086384-6086496:1:exon

XP_032741753.1
type: Protein
SIO_000068: ncbiprotein

position:6086496:1
position: 6086496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6078108-6078276:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6086384-6086496:1:exon

LOC116884905
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6162330..6166058
location: region:6162330-6166058:1
so has part: feature:6162330-6166058:1:exon

116884905
type: Gene
SIO_000068: ncbigene

position:6162330:1
position: 6162330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6166058:1
position: 6166058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6162330-6166058:1:exon

LOC116884905
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884905
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116884905
subclass of: SO_0000673
so part of: LOC116884905
location: 6162330..6162919
location: region:6162330-6162919:1
so has part: feature:6162330-6162919:1:exon

position:6162919:1
position: 6162919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6162330-6162919:1:exon

LOC116884905
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116884905
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116884905
subclass of: SO_0000673
so part of: LOC116884905
location: 6165915..6166058
location: region:6165915-6166058:1
so has part: feature:6165915-6166058:1:exon

position:6165915:1
position: 6165915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6165915-6166058:1:exon

LOC116884863
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884863
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6256967..6288115)
location: region:6256967-6288115:-1
so has part: feature:6256967-6288115:-1:exon
subclass of: SO_0000011

116884863
type: Gene
SIO_000068: ncbigene

position:6256967:-1
position: 6256967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6288115:-1
position: 6288115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6256967-6288115:-1:exon

LOC116884863
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10117
nc RNA class: lncRNA
gene: LOC116884863
product: uncharacterized LOC116884863
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004385905.1
SIO_010081: LOC116884863
subclass of: SO_0000673
so part of: LOC116884863
location: complement(join(6256967..6257054,6260883..6260918,6288020..6288115))
location: region:6256967-6288115:-1
so has part: feature:6288020-6288115:-1:exon
so has part: feature:6260883-6260918:-1:exon
so has part: feature:6256967-6257054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6288020-6288115:-1:exon

position:6288020:-1
position: 6288020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6260883-6260918:-1:exon

position:6260883:-1
position: 6260883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6260918:-1
position: 6260918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6256967-6257054:-1:exon

position:6257054:-1
position: 6257054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Spry4
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Spry4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6331201..6346048
location: region:6331201-6346048:1
so has part: feature:6331201-6346048:1:exon
subclass of: SO_0000010

116884579
type: Gene
SIO_000068: ncbigene

position:6331201:1
position: 6331201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6346048:1
position: 6346048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6331201-6346048:1:exon

Spry4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Spry4
product: sprouty RTK signaling antagonist 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032885721.1
SIO_010081: Spry4
subclass of: SO_0000673
so part of: Spry4
location: join(6331201..6331446,6341517..6346048)
location: region:6331201-6346048:1
so has part: feature:6331201-6331446:1:exon
so has part: feature:6341517-6346048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6331201-6331446:1:exon

position:6331446:1
position: 6331446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6341517-6346048:1:exon

position:6341517:1
position: 6341517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Spry4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Spry4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein sprouty homolog 4
translation: MEPPIPQSGVPLNPSSVMVQPLLDSRVPHSRLQHPLTILPIDQMKTSHVENDYIDNPSLAPATGSKRPRAGAPELAPTPARCDQDVTHHWISFSGRPSSVSSSSSTSSDQRLLDHMAPPPVTEQASPRAVRLQPKVVHCKPLDLKGPAAPPELDKHFLLCEACGKCKCKECASPRTLPSCWVCNQECLCSAQTLVNYSTCMCLVQGIFYHCTNEDDEGSCADHPCSCSGSNCCARWSFMGALSLVLPCLLCYLPATGCVKLAQHGYDRLRRPGCRCKHTNSVICKAASGDTKANRSDKPF
SIO_010081: Spry4
subclass of: SO_0000673
so part of: Spry4
location: 6341564..6342466
location: region:6341564-6342466:1
so has part: feature:6341564-6342466:1:exon

XP_032741612.1
type: Protein
SIO_000068: ncbiprotein

position:6341564:1
position: 6341564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6342466:1
position: 6342466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6341564-6342466:1:exon

Ndfip1
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Ndfip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6463493..6511062)
location: region:6463493-6511062:-1
so has part: feature:6463493-6511062:-1:exon
subclass of: SO_0000010

116885008
type: Gene
SIO_000068: ncbigene

position:6463493:-1
position: 6463493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6511062:-1
position: 6511062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6463493-6511062:-1:exon

Ndfip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Ndfip1
product: Nedd4 family interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 79 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032886247.1
SIO_010081: Ndfip1
subclass of: SO_0000673
so part of: Ndfip1
location: complement(join(6463493..6464456,6468501..6468606,6471989..6472055,6477525..6477649,6478341..6478428,6482480..6482610,6486886..6486973,6510815..6511062))
location: region:6463493-6511062:-1
so has part: feature:6510815-6511062:-1:exon
so has part: feature:6486886-6486973:-1:exon
so has part: feature:6482480-6482610:-1:exon
so has part: feature:6478341-6478428:-1:exon
so has part: feature:6477525-6477649:-1:exon
so has part: feature:6471989-6472055:-1:exon
so has part: feature:6468501-6468606:-1:exon
so has part: feature:6463493-6464456:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6510815-6511062:-1:exon

position:6510815:-1
position: 6510815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6486886-6486973:-1:exon

position:6486886:-1
position: 6486886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6486973:-1
position: 6486973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6482480-6482610:-1:exon

position:6482480:-1
position: 6482480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6482610:-1
position: 6482610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6478341-6478428:-1:exon

position:6478341:-1
position: 6478341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6478428:-1
position: 6478428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6477525-6477649:-1:exon

position:6477525:-1
position: 6477525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6477649:-1
position: 6477649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6471989-6472055:-1:exon

position:6471989:-1
position: 6471989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6472055:-1
position: 6472055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6468501-6468606:-1:exon

position:6468501:-1
position: 6468501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6468606:-1
position: 6468606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6463493-6464456:-1:exon

position:6464456:-1
position: 6464456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ndfip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Ndfip1
product: Nedd4 family interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 104 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032886246.1
SIO_010081: Ndfip1
subclass of: SO_0000673
so part of: Ndfip1
location: complement(join(6463493..6464416,6468501..6468606,6471989..6472055,6477525..6477649,6478341..6478428,6482480..6482610,6486886..6486973,6510815..6511061))
location: region:6463493-6511061:-1
so has part: feature:6510815-6511061:-1:exon
so has part: feature:6486886-6486973:-1:exon
so has part: feature:6482480-6482610:-1:exon
so has part: feature:6478341-6478428:-1:exon
so has part: feature:6477525-6477649:-1:exon
so has part: feature:6471989-6472055:-1:exon
so has part: feature:6468501-6468606:-1:exon
so has part: feature:6463493-6464416:-1:exon

position:6511061:-1
position: 6511061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6510815-6511061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6486886-6486973:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6482480-6482610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6478341-6478428:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6477525-6477649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6471989-6472055:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6468501-6468606:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6463493-6464416:-1:exon

position:6464416:-1
position: 6464416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ndfip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Ndfip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4 family-interacting protein 1
translation: MALALAALAAVEPSCGTGYQQLQNEEEPGEREQTAGDAPPPYSSISVESAAYFDYKDESGFPKPPSYNVATTLPSYDEAERTKAEATIPLVPGRDEDFVGRDDFDDADQLRIGNDGIFMLTFFMAFLFNWIGFFLSFCLTTSAAGRYGAISGFGLSLIKWILIVRFSTYFPGYFDGQYWLWWVFLVLGFLLFLRGFINYAKVRKMPETFSNLPRTRVLFIY
SIO_010081: Ndfip1
subclass of: SO_0000673
so part of: Ndfip1
location: complement(join(6468503..6468606,6471989..6472055,6477525..6477649,6478341..6478428,6482480..6482610,6486886..6486973,6510815..6510877))
location: region:6468503-6510877:-1
so has part: feature:6510815-6510877:-1:exon
so has part: feature:6486886-6486973:-1:exon
so has part: feature:6482480-6482610:-1:exon
so has part: feature:6478341-6478428:-1:exon
so has part: feature:6477525-6477649:-1:exon
so has part: feature:6471989-6472055:-1:exon
so has part: feature:6468503-6468606:-1:exon

XP_032742137.1
type: Protein
SIO_000068: ncbiprotein

position:6468503:-1
position: 6468503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6510877:-1
position: 6510877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6510815-6510877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6486886-6486973:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6482480-6482610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6478341-6478428:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6477525-6477649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6471989-6472055:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6468503-6468606:-1:exon

Ndfip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Ndfip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4 family-interacting protein 1
translation: MALALAALAAVEPSCGTGYQQLQNEEEPGEREQTAGDAPPPYSSISVESAAYFDYKDESGFPKPPSYNVATTLPSYDEAERTKAEATIPLVPGRDEDFVGRDDFDDADQLRIGNDGIFMLTFFMAFLFNWIGFFLSFCLTTSAAGRYGAISGFGLSLIKWILIVRFSTYFPGYFDGQYWLWWVFLVLGFLLFLRGFINYAKVRKMPETFSNLPRTRVLFIY
SIO_010081: Ndfip1
subclass of: SO_0000673
so part of: Ndfip1
location: complement(join(6468503..6468606,6471989..6472055,6477525..6477649,6478341..6478428,6482480..6482610,6486886..6486973,6510815..6510877))
location: region:6468503-6510877:-1
so has part: feature:6510815-6510877:-1:exon
so has part: feature:6486886-6486973:-1:exon
so has part: feature:6482480-6482610:-1:exon
so has part: feature:6478341-6478428:-1:exon
so has part: feature:6477525-6477649:-1:exon
so has part: feature:6471989-6472055:-1:exon
so has part: feature:6468503-6468606:-1:exon

XP_032742138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6510815-6510877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6486886-6486973:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6482480-6482610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6478341-6478428:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6477525-6477649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6471989-6472055:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6468503-6468606:-1:exon

LOC116885009
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116885009
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6495881..6496232
location: region:6495881-6496232:1
so has part: feature:6495881-6496232:1:exon

116885009
type: Gene
SIO_000068: ncbigene

position:6495881:1
position: 6495881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6496232:1
position: 6496232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6495881-6496232:1:exon

LOC116885009
type: Exon
subclass of: SO_0000147
RO_0002162: 10117
gene: LOC116885009
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
pseudo: true
SIO_010081: LOC116885009
subclass of: SO_0000673
so part of: LOC116885009
location: 6495881..6496232
location: region:6495881-6496232:1
so has part: feature:6495881-6496232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6495881-6496232:1:exon

Gnpda1
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Gnpda1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6586886..6597744
location: region:6586886-6597744:1
so has part: feature:6586886-6597744:1:exon
subclass of: SO_0000010

116884651
type: Gene
SIO_000068: ncbigene

position:6586886:1
position: 6586886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6597744:1
position: 6597744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6586886-6597744:1:exon

Gnpda1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Gnpda1
product: glucosamine-6-phosphate deaminase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 20 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032885808.1
SIO_010081: Gnpda1
subclass of: SO_0000673
so part of: Gnpda1
location: join(6586886..6586951,6587621..6587750,6590288..6590389,6593194..6593376,6594396..6594580,6596052..6596226,6597360..6597744)
location: region:6586886-6597744:1
so has part: feature:6586886-6586951:1:exon
so has part: feature:6587621-6587750:1:exon
so has part: feature:6590288-6590389:1:exon
so has part: feature:6593194-6593376:1:exon
so has part: feature:6594396-6594580:1:exon
so has part: feature:6596052-6596226:1:exon
so has part: feature:6597360-6597744:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6586886-6586951:1:exon

position:6586951:1
position: 6586951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6587621-6587750:1:exon

position:6587621:1
position: 6587621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6587750:1
position: 6587750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6590288-6590389:1:exon

position:6590288:1
position: 6590288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6590389:1
position: 6590389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6593194-6593376:1:exon

position:6593194:1
position: 6593194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6593376:1
position: 6593376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6594396-6594580:1:exon

position:6594396:1
position: 6594396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6594580:1
position: 6594580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6596052-6596226:1:exon

position:6596052:1
position: 6596052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6596226:1
position: 6596226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6597360-6597744:1:exon

position:6597360:1
position: 6597360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gnpda1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Gnpda1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucosamine-6-phosphate isomerase 1
translation: MKLIILEHYSQASEWAAKYIRNRIIQFNPGPDKYFTLGLPTGSTPLGCYQKLIEYYKNGDLSFKYVKTFNMDEYVGLPREHPESYHSFMWNNFFKHIDIHPENTHILDGNAADLQAECDSFEEKIQAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGDLAKVPTMALTVGVGTVMDAKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGLMLVHNKLVDPLYSIKEKEIEKSQSAKKPYSD
SIO_010081: Gnpda1
subclass of: SO_0000673
so part of: Gnpda1
location: join(6587627..6587750,6590288..6590389,6593194..6593376,6594396..6594580,6596052..6596226,6597360..6597460)
location: region:6587627-6597460:1
so has part: feature:6587627-6587750:1:exon
so has part: feature:6590288-6590389:1:exon
so has part: feature:6593194-6593376:1:exon
so has part: feature:6594396-6594580:1:exon
so has part: feature:6596052-6596226:1:exon
so has part: feature:6597360-6597460:1:exon

XP_032741699.1
type: Protein
SIO_000068: ncbiprotein

position:6587627:1
position: 6587627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6597460:1
position: 6597460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6587627-6587750:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6590288-6590389:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6593194-6593376:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6594396-6594580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6596052-6596226:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6597360-6597460:1:exon

Rnf14
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Rnf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6608445..6632260)
location: region:6608445-6632260:-1
so has part: feature:6608445-6632260:-1:exon
subclass of: SO_0000010

116884991
type: Gene
SIO_000068: ncbigene

position:6608445:-1
position: 6608445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6632260:-1
position: 6632260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6608445-6632260:-1:exon

Rnf14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Rnf14
product: ring finger protein 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 115 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032886211.1
SIO_010081: Rnf14
subclass of: SO_0000673
so part of: Rnf14
location: complement(join(6608445..6609740,6613567..6613697,6615442..6615614,6618886..6619114,6620162..6620710,6627194..6627345,6628336..6628497,6628953..6629122,6632116..6632260))
location: region:6608445-6632260:-1
so has part: feature:6632116-6632260:-1:exon
so has part: feature:6628953-6629122:-1:exon
so has part: feature:6628336-6628497:-1:exon
so has part: feature:6627194-6627345:-1:exon
so has part: feature:6620162-6620710:-1:exon
so has part: feature:6618886-6619114:-1:exon
so has part: feature:6615442-6615614:-1:exon
so has part: feature:6613567-6613697:-1:exon
so has part: feature:6608445-6609740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6632116-6632260:-1:exon

position:6632116:-1
position: 6632116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6628953-6629122:-1:exon

position:6628953:-1
position: 6628953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6629122:-1
position: 6629122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6628336-6628497:-1:exon

position:6628336:-1
position: 6628336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6628497:-1
position: 6628497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6627194-6627345:-1:exon

position:6627194:-1
position: 6627194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6627345:-1
position: 6627345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6620162-6620710:-1:exon

position:6620162:-1
position: 6620162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6620710:-1
position: 6620710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6618886-6619114:-1:exon

position:6618886:-1
position: 6618886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6619114:-1
position: 6619114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6615442-6615614:-1:exon

position:6615442:-1
position: 6615442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6615614:-1
position: 6615614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6613567-6613697:-1:exon

position:6613567:-1
position: 6613567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6613697:-1
position: 6613697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6608445-6609740:-1:exon

position:6609740:-1
position: 6609740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rnf14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Rnf14
product: ring finger protein 14, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 93 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032886214.1
SIO_010081: Rnf14
subclass of: SO_0000673
so part of: Rnf14
location: complement(join(6608445..6609740,6613567..6613697,6615442..6615614,6618886..6619114,6620162..6620710,6627194..6627345,6628336..6628497,6628953..6629122,6631640..6632077))
location: region:6608445-6632077:-1
so has part: feature:6631640-6632077:-1:exon
so has part: feature:6628953-6629122:-1:exon
so has part: feature:6628336-6628497:-1:exon
so has part: feature:6627194-6627345:-1:exon
so has part: feature:6620162-6620710:-1:exon
so has part: feature:6618886-6619114:-1:exon
so has part: feature:6615442-6615614:-1:exon
so has part: feature:6613567-6613697:-1:exon
so has part: feature:6608445-6609740:-1:exon

position:6632077:-1
position: 6632077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6631640-6632077:-1:exon

position:6631640:-1
position: 6631640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6628953-6629122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6628336-6628497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6627194-6627345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6620162-6620710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6618886-6619114:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6615442-6615614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6613567-6613697:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6608445-6609740:-1:exon

Rnf14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Rnf14
product: ring finger protein 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 88 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032886213.1
SIO_010081: Rnf14
subclass of: SO_0000673
so part of: Rnf14
location: complement(join(6608445..6609740,6613567..6613697,6615442..6615614,6618886..6619114,6620162..6620710,6627194..6627345,6628336..6628497,6628953..6629122,6629549..6629698))
location: region:6608445-6629698:-1
so has part: feature:6629549-6629698:-1:exon
so has part: feature:6628953-6629122:-1:exon
so has part: feature:6628336-6628497:-1:exon
so has part: feature:6627194-6627345:-1:exon
so has part: feature:6620162-6620710:-1:exon
so has part: feature:6618886-6619114:-1:exon
so has part: feature:6615442-6615614:-1:exon
so has part: feature:6613567-6613697:-1:exon
so has part: feature:6608445-6609740:-1:exon

position:6629698:-1
position: 6629698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6629549-6629698:-1:exon

position:6629549:-1
position: 6629549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6628953-6629122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6628336-6628497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6627194-6627345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6620162-6620710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6618886-6619114:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6615442-6615614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6613567-6613697:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6608445-6609740:-1:exon

Rnf14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Rnf14
product: ring finger protein 14, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 89 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032886216.1
SIO_010081: Rnf14
subclass of: SO_0000673
so part of: Rnf14
location: complement(join(6608447..6609740,6613567..6613697,6615442..6615614,6618886..6619114,6620162..6620710,6628336..6628497,6628953..6629122,6632116..6632260))
location: region:6608447-6632260:-1
so has part: feature:6632116-6632260:-1:exon
so has part: feature:6628953-6629122:-1:exon
so has part: feature:6628336-6628497:-1:exon
so has part: feature:6620162-6620710:-1:exon
so has part: feature:6618886-6619114:-1:exon
so has part: feature:6615442-6615614:-1:exon
so has part: feature:6613567-6613697:-1:exon
so has part: feature:6608447-6609740:-1:exon

position:6608447:-1
position: 6608447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6632116-6632260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6628953-6629122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6628336-6628497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6620162-6620710:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6618886-6619114:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6615442-6615614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6613567-6613697:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6608447-6609740:-1:exon

Rnf14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Rnf14
product: ring finger protein 14, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 86 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_032886215.1
SIO_010081: Rnf14
subclass of: SO_0000673
so part of: Rnf14
location: complement(join(6608447..6609740,6613567..6613697,6615442..6615614,6618886..6619114,6620162..6620710,6621153..6621261,6627194..6627345,6628336..6628497,6628953..6629122,6632116..6632260))
location: region:6608447-6632260:-1
so has part: feature:6632116-6632260:-1:exon
so has part: feature:6628953-6629122:-1:exon
so has part: feature:6628336-6628497:-1:exon
so has part: feature:6627194-6627345:-1:exon
so has part: feature:6621153-6621261:-1:exon
so has part: feature:6620162-6620710:-1:exon
so has part: feature:6618886-6619114:-1:exon
so has part: feature:6615442-6615614:-1:exon
so has part: feature:6613567-6613697:-1:exon
so has part: feature:6608447-6609740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6632116-6632260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6628953-6629122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6628336-6628497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6627194-6627345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6621153-6621261:-1:exon

position:6621153:-1
position: 6621153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6621261:-1
position: 6621261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6620162-6620710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6618886-6619114:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6615442-6615614:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6613567-6613697:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6608447-6609740:-1:exon

Rnf14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Rnf14
product: ring finger protein 14, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 84 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032886217.1
SIO_010081: Rnf14
subclass of: SO_0000673
so part of: Rnf14
location: complement(join(6608447..6609740,6613567..6613697,6615442..6615614,6618886..6619114,6620162..6620710,6621153..6621217,6627194..6627304))
location: region:6608447-6627304:-1
so has part: feature:6627194-6627304:-1:exon
so has part: feature:6621153-6621217:-1:exon
so has part: feature:6620162-6620710:-1:exon
so has part: feature:6618886-6619114:-1:exon
so has part: feature:6615442-6615614:-1:exon
so has part: feature:6613567-6613697:-1:exon
so has part: feature:6608447-6609740:-1:exon

position:6627304:-1
position: 6627304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6627194-6627304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6621153-6621217:-1:exon

position:6621217:-1
position: 6621217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6620162-6620710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6618886-6619114:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6615442-6615614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6613567-6613697:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6608447-6609740:-1:exon

Rnf14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Rnf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X1
translation: MSAEDLEAQEDELLALASIYDGDEFRKAESVQGGETRIYLDLPQNFKIFVSGNSNECLQNSGFEYTICFLPPLVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGRVVLFAWMQFLKEETLTYLNIVSPFELKMGSQKKVQRRTTAQASSNTELALGGAAAAAAAAAPDVDQEDSVDERAVQDVESLSSLIQEILDFNQDRQMKCFNSKLFLCSICFCEKLGSDCMYFLECRHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCSSVATPGQVKELVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEPGGTMAICSSCNFAFCTLCRLTYHGVSPCKVTAEKLIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCTGCMQYFCWICMGSLSRANPYKHFTDPDSPCFNRLFHAVDVNGDIWEDEIED
SIO_010081: Rnf14
subclass of: SO_0000673
so part of: Rnf14
location: complement(join(6609683..6609740,6613567..6613697,6615442..6615614,6618886..6619114,6620162..6620710,6627194..6627345,6628336..6628489))
location: region:6609683-6628489:-1
so has part: feature:6628336-6628489:-1:exon
so has part: feature:6627194-6627345:-1:exon
so has part: feature:6620162-6620710:-1:exon
so has part: feature:6618886-6619114:-1:exon
so has part: feature:6615442-6615614:-1:exon
so has part: feature:6613567-6613697:-1:exon
so has part: feature:6609683-6609740:-1:exon

XP_032742102.1
type: Protein
SIO_000068: ncbiprotein

position:6609683:-1
position: 6609683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6628489:-1
position: 6628489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6628336-6628489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6627194-6627345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6620162-6620710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6618886-6619114:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6615442-6615614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6613567-6613697:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6609683-6609740:-1:exon

Rnf14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Rnf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X1
translation: MSAEDLEAQEDELLALASIYDGDEFRKAESVQGGETRIYLDLPQNFKIFVSGNSNECLQNSGFEYTICFLPPLVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGRVVLFAWMQFLKEETLTYLNIVSPFELKMGSQKKVQRRTTAQASSNTELALGGAAAAAAAAAPDVDQEDSVDERAVQDVESLSSLIQEILDFNQDRQMKCFNSKLFLCSICFCEKLGSDCMYFLECRHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCSSVATPGQVKELVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEPGGTMAICSSCNFAFCTLCRLTYHGVSPCKVTAEKLIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCTGCMQYFCWICMGSLSRANPYKHFTDPDSPCFNRLFHAVDVNGDIWEDEIED
SIO_010081: Rnf14
subclass of: SO_0000673
so part of: Rnf14
location: complement(join(6609683..6609740,6613567..6613697,6615442..6615614,6618886..6619114,6620162..6620710,6627194..6627345,6628336..6628489))
location: region:6609683-6628489:-1
so has part: feature:6628336-6628489:-1:exon
so has part: feature:6627194-6627345:-1:exon
so has part: feature:6620162-6620710:-1:exon
so has part: feature:6618886-6619114:-1:exon
so has part: feature:6615442-6615614:-1:exon
so has part: feature:6613567-6613697:-1:exon
so has part: feature:6609683-6609740:-1:exon

XP_032742104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6628336-6628489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6627194-6627345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6620162-6620710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6618886-6619114:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6615442-6615614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6613567-6613697:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6609683-6609740:-1:exon

Rnf14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Rnf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X1
translation: MSAEDLEAQEDELLALASIYDGDEFRKAESVQGGETRIYLDLPQNFKIFVSGNSNECLQNSGFEYTICFLPPLVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGRVVLFAWMQFLKEETLTYLNIVSPFELKMGSQKKVQRRTTAQASSNTELALGGAAAAAAAAAPDVDQEDSVDERAVQDVESLSSLIQEILDFNQDRQMKCFNSKLFLCSICFCEKLGSDCMYFLECRHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCSSVATPGQVKELVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEPGGTMAICSSCNFAFCTLCRLTYHGVSPCKVTAEKLIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCTGCMQYFCWICMGSLSRANPYKHFTDPDSPCFNRLFHAVDVNGDIWEDEIED
SIO_010081: Rnf14
subclass of: SO_0000673
so part of: Rnf14
location: complement(join(6609683..6609740,6613567..6613697,6615442..6615614,6618886..6619114,6620162..6620710,6627194..6627345,6628336..6628489))
location: region:6609683-6628489:-1
so has part: feature:6628336-6628489:-1:exon
so has part: feature:6627194-6627345:-1:exon
so has part: feature:6620162-6620710:-1:exon
so has part: feature:6618886-6619114:-1:exon
so has part: feature:6615442-6615614:-1:exon
so has part: feature:6613567-6613697:-1:exon
so has part: feature:6609683-6609740:-1:exon

XP_032742105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6628336-6628489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6627194-6627345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6620162-6620710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6618886-6619114:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6615442-6615614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6613567-6613697:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6609683-6609740:-1:exon

Rnf14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Rnf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X2
translation: MQFLKEETLTYLNIVSPFELKMGSQKKVQRRTTAQASSNTELALGGAAAAAAAAAPDVDQEDSVDERAVQDVESLSSLIQEILDFNQDRQMKCFNSKLFLCSICFCEKLGSDCMYFLECRHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCSSVATPGQVKELVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEPGGTMAICSSCNFAFCTLCRLTYHGVSPCKVTAEKLIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCTGCMQYFCWICMGSLSRANPYKHFTDPDSPCFNRLFHAVDVNGDIWEDEIED
SIO_010081: Rnf14
subclass of: SO_0000673
so part of: Rnf14
location: complement(join(6609683..6609740,6613567..6613697,6615442..6615614,6618886..6619114,6620162..6620638))
location: region:6609683-6620638:-1
so has part: feature:6620162-6620638:-1:exon
so has part: feature:6618886-6619114:-1:exon
so has part: feature:6615442-6615614:-1:exon
so has part: feature:6613567-6613697:-1:exon
so has part: feature:6609683-6609740:-1:exon

XP_032742106.1
type: Protein
SIO_000068: ncbiprotein

position:6620638:-1
position: 6620638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6620162-6620638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6618886-6619114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6615442-6615614:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6613567-6613697:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6609683-6609740:-1:exon

Rnf14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Rnf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X2
translation: MQFLKEETLTYLNIVSPFELKMGSQKKVQRRTTAQASSNTELALGGAAAAAAAAAPDVDQEDSVDERAVQDVESLSSLIQEILDFNQDRQMKCFNSKLFLCSICFCEKLGSDCMYFLECRHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCSSVATPGQVKELVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEPGGTMAICSSCNFAFCTLCRLTYHGVSPCKVTAEKLIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCTGCMQYFCWICMGSLSRANPYKHFTDPDSPCFNRLFHAVDVNGDIWEDEIED
SIO_010081: Rnf14
subclass of: SO_0000673
so part of: Rnf14
location: complement(join(6609683..6609740,6613567..6613697,6615442..6615614,6618886..6619114,6620162..6620638))
location: region:6609683-6620638:-1
so has part: feature:6620162-6620638:-1:exon
so has part: feature:6618886-6619114:-1:exon
so has part: feature:6615442-6615614:-1:exon
so has part: feature:6613567-6613697:-1:exon
so has part: feature:6609683-6609740:-1:exon

XP_032742107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6620162-6620638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6618886-6619114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6615442-6615614:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6613567-6613697:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6609683-6609740:-1:exon

Rnf14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Rnf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X2
translation: MQFLKEETLTYLNIVSPFELKMGSQKKVQRRTTAQASSNTELALGGAAAAAAAAAPDVDQEDSVDERAVQDVESLSSLIQEILDFNQDRQMKCFNSKLFLCSICFCEKLGSDCMYFLECRHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCSSVATPGQVKELVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEPGGTMAICSSCNFAFCTLCRLTYHGVSPCKVTAEKLIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCTGCMQYFCWICMGSLSRANPYKHFTDPDSPCFNRLFHAVDVNGDIWEDEIED
SIO_010081: Rnf14
subclass of: SO_0000673
so part of: Rnf14
location: complement(join(6609683..6609740,6613567..6613697,6615442..6615614,6618886..6619114,6620162..6620638))
location: region:6609683-6620638:-1
so has part: feature:6620162-6620638:-1:exon
so has part: feature:6618886-6619114:-1:exon
so has part: feature:6615442-6615614:-1:exon
so has part: feature:6613567-6613697:-1:exon
so has part: feature:6609683-6609740:-1:exon

XP_032742108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6620162-6620638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6618886-6619114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6615442-6615614:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6613567-6613697:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6609683-6609740:-1:exon

LOC116885089
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116885089
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6630860..6630962)
location: region:6630860-6630962:-1
so has part: feature:6630860-6630962:-1:exon
subclass of: SO_0000623

116885089
type: Gene
SIO_000068: ncbigene

position:6630860:-1
position: 6630860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6630962:-1
position: 6630962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6630860-6630962:-1:exon

LOC116885089
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10117
nc RNA class: snRNA
gene: LOC116885089
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004385960.1
SIO_010081: LOC116885089
subclass of: SO_0000673
so part of: LOC116885089
location: complement(6630860..6630962)
location: region:6630860-6630962:-1
so has part: feature:6630860-6630962:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6630860-6630962:-1:exon

Pcdh12
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Pcdh12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6644689..6660960
location: region:6644689-6660960:1
so has part: feature:6644689-6660960:1:exon
subclass of: SO_0000010

116884990
type: Gene
SIO_000068: ncbigene

position:6644689:1
position: 6644689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6660960:1
position: 6660960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6644689-6660960:1:exon

Pcdh12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Pcdh12
product: protocadherin 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 6 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886210.1
SIO_010081: Pcdh12
subclass of: SO_0000673
so part of: Pcdh12
location: join(6644689..6647946,6651090..6651187,6653712..6653863,6658972..6660960)
location: region:6644689-6660960:1
so has part: feature:6644689-6647946:1:exon
so has part: feature:6651090-6651187:1:exon
so has part: feature:6653712-6653863:1:exon
so has part: feature:6658972-6660960:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6644689-6647946:1:exon

position:6647946:1
position: 6647946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6651090-6651187:1:exon

position:6651090:1
position: 6651090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6651187:1
position: 6651187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6653712-6653863:1:exon

position:6653712:1
position: 6653712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6653863:1
position: 6653863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6658972-6660960:1:exon

position:6658972:1
position: 6658972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pcdh12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Pcdh12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-12
translation: MLLLPFLLGLLGPGSYLFISGACQEVATVTVKFQVAEEVPSGTVIGKLSQEPGVEERRGKAGDAFQILQLPQALPIQMNSEDGLLNTSSRLDREKLCRQQDPCLVSFDVLATGASALIHVEIQVLDINDHQPQFPKDEQELEISESASLHTRIPLDRALDQDTGPNSLYSYSLSPSEHFALDVIVGPDETKHAELVVVKELDREVHSYFDLVLTAYDNGNPPKSGTSMVKVNVLDSNDNSPVFAESSLALEIPEDTAPGTLLINLTATDPDQGPNGEVEFFFGKHVSPEVMNTFGIDAKTGQIILLQPLDYEKNPAYEVDVQARDLGPNSIPGHCKVLIKVLDVNDNAPSIHITWASQMSLVSEDLPRDSFIALVIANDLDSGNNGLVNCWLNQELGHFRLKRTNGNTYMLLTSATLDREQWPIYTLTVFAQDQGPQALSAEKELQIQVSDVNDNAPVFEKSRYEVSTWENNPPSLHLITLKAHDADLGSNGKVSYRIKDSPVSHLVIIDSETGEVTAQRSLDYEEMAGFEFQVIAEDRGQPQLSSSISVWVSLLDANDNTPEVIQPTLSEGKATLSVLVNASTGHLLLPIESPSGMDPAGTGTPPKATHSPWSFLLVTIVARDADSGANGELLYSIQSGNDAHLFVLSPSLGQLFINVTNASSLIGSQWDLGIVVEDQGSPSLQTQVSLKVVFVTSMDHLRDSAHEPGILSTPALAMICLAVLLAVFGLILALLVSICRIEKRDNRAYNCREAESMYRHQPKRPQKHIQKADIHLVPMLRAQEDETEEVRPSHKDTSKETLMEAGWDSCLQAPFHLTPTLYRTLRNQGNQGALAESQEVLQDTFNFLFNHPRQRNASRENLNFPESPPTLRQPLLKPLKVPGSPIVRVTGDQGSKEAPQSPPASSATLRRQRNLNGKVSPKGESSPHQILRSLVRLSVAAFAERNPVEELAGDSPPVQQISQLLSLLHQGQFQPKPNHRGNKYSAKPGSSRATIPDTDGLGIRPGGLSEPDLEEGPPSPEEDLSVKRLLEEELSSLLDPNTGLALDKLSPPDPAWMARLSLPLTTNYRDNLSSPDAAASEEPRTFQTFGKTVGPGPELSATGTRLASTFVSEMSSLLEMLLEQNTVPVEAASAALRRLSVCGRTLSLDLATSGASGSEAQLGRKKAAESSLGCGRNL
SIO_010081: Pcdh12
subclass of: SO_0000673
so part of: Pcdh12
location: join(6645070..6647946,6651090..6651187,6653712..6653863,6658972..6659381)
location: region:6645070-6659381:1
so has part: feature:6645070-6647946:1:exon
so has part: feature:6651090-6651187:1:exon
so has part: feature:6653712-6653863:1:exon
so has part: feature:6658972-6659381:1:exon

XP_032742101.1
type: Protein
SIO_000068: ncbiprotein

position:6645070:1
position: 6645070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6659381:1
position: 6659381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6645070-6647946:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6651090-6651187:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6653712-6653863:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6658972-6659381:1:exon

Dele1
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Dele1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6665118..6678217)
location: region:6665118-6678217:-1
so has part: feature:6665118-6678217:-1:exon
subclass of: SO_0000010

116884501
type: Gene
SIO_000068: ncbigene

position:6665118:-1
position: 6665118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6678217:-1
position: 6678217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6665118-6678217:-1:exon

Dele1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Dele1
product: DAP3 binding cell death enhancer 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 ESTs, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032885632.1
SIO_010081: Dele1
subclass of: SO_0000673
so part of: Dele1
location: complement(join(6665118..6665904,6666482..6666700,6667691..6669383,6669467..6669625,6670788..6670930,6673385..6673481,6673583..6673671,6673874..6674032,6674873..6675020,6677085..6677202,6677285..6677399,6678085..6678217))
location: region:6665118-6678217:-1
so has part: feature:6678085-6678217:-1:exon
so has part: feature:6677285-6677399:-1:exon
so has part: feature:6677085-6677202:-1:exon
so has part: feature:6674873-6675020:-1:exon
so has part: feature:6673874-6674032:-1:exon
so has part: feature:6673583-6673671:-1:exon
so has part: feature:6673385-6673481:-1:exon
so has part: feature:6670788-6670930:-1:exon
so has part: feature:6669467-6669625:-1:exon
so has part: feature:6667691-6669383:-1:exon
so has part: feature:6666482-6666700:-1:exon
so has part: feature:6665118-6665904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6678085-6678217:-1:exon

position:6678085:-1
position: 6678085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6677285-6677399:-1:exon

position:6677285:-1
position: 6677285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6677399:-1
position: 6677399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6677085-6677202:-1:exon

position:6677085:-1
position: 6677085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6677202:-1
position: 6677202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6674873-6675020:-1:exon

position:6674873:-1
position: 6674873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6675020:-1
position: 6675020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6673874-6674032:-1:exon

position:6673874:-1
position: 6673874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6674032:-1
position: 6674032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6673583-6673671:-1:exon

position:6673583:-1
position: 6673583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6673671:-1
position: 6673671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6673385-6673481:-1:exon

position:6673385:-1
position: 6673385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6673481:-1
position: 6673481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6670788-6670930:-1:exon

position:6670788:-1
position: 6670788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6670930:-1
position: 6670930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6669467-6669625:-1:exon

position:6669467:-1
position: 6669467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6669625:-1
position: 6669625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6667691-6669383:-1:exon

position:6667691:-1
position: 6667691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6669383:-1
position: 6669383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6666482-6666700:-1:exon

position:6666482:-1
position: 6666482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6666700:-1
position: 6666700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6665118-6665904:-1:exon

position:6665904:-1
position: 6665904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Dele1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Dele1
product: DAP3 binding cell death enhancer 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032885631.1
SIO_010081: Dele1
subclass of: SO_0000673
so part of: Dele1
location: complement(join(6665118..6665904,6666482..6666700,6667691..6669383,6669467..6669625,6670788..6670930,6673385..6673481,6673583..6673671,6673874..6674032,6674873..6675020,6677085..6677202,6677285..6677399,6678067..6678217))
location: region:6665118-6678217:-1
so has part: feature:6678067-6678217:-1:exon
so has part: feature:6677285-6677399:-1:exon
so has part: feature:6677085-6677202:-1:exon
so has part: feature:6674873-6675020:-1:exon
so has part: feature:6673874-6674032:-1:exon
so has part: feature:6673583-6673671:-1:exon
so has part: feature:6673385-6673481:-1:exon
so has part: feature:6670788-6670930:-1:exon
so has part: feature:6669467-6669625:-1:exon
so has part: feature:6667691-6669383:-1:exon
so has part: feature:6666482-6666700:-1:exon
so has part: feature:6665118-6665904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6678067-6678217:-1:exon

position:6678067:-1
position: 6678067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6677285-6677399:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6677085-6677202:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6674873-6675020:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6673874-6674032:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6673583-6673671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6673385-6673481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6670788-6670930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6669467-6669625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6667691-6669383:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6666482-6666700:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6665118-6665904:-1:exon

Dele1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Dele1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death ligand signal enhancer isoform X2
translation: MWRLTGILGRALPRLLGPGFRGITPKPTSSDGPQTTSTTLPLPRVNFDRSGSHGSKRNRDPKCCGWKEAFHWMSAHVSPNTLRDAVSWGTLAVLALHLARQIHFHAPLVAGPQSAERCSWHSPLYRFLSSSWWHPHSSLRRHVLPSPDCPAPRNTGLREPRLGQEEPSARSQGLPSDSSLKPGLLNLPEEEPGDFGFLNASRDFTSQAKAAEAGPPGGKNEQDKPKALPLEEAVTSIQQLFQLSVAIAFNFLGTENIKTGDYTAAFSYFQKAADRGYSKAQYNVGLCLEHGRGTSRDLSKAILFYHLAAVQGHSLAQYRYARCLLQSPGSVSDPEQQRAVSLLRQAADSGLTEAQAFLGVLFTKEPHLDEQRAVKYLWLAASNGVRMRSLVCACWGASLIRKGIWKLVLSSGVWYVF
SIO_010081: Dele1
subclass of: SO_0000673
so part of: Dele1
location: complement(join(6669189..6669383,6669467..6669625,6670788..6670930,6673385..6673481,6673583..6673671,6673874..6674032,6674873..6675020,6677085..6677202,6677285..6677399,6678085..6678115))
location: region:6669189-6678115:-1
so has part: feature:6678085-6678115:-1:exon
so has part: feature:6677285-6677399:-1:exon
so has part: feature:6677085-6677202:-1:exon
so has part: feature:6674873-6675020:-1:exon
so has part: feature:6673874-6674032:-1:exon
so has part: feature:6673583-6673671:-1:exon
so has part: feature:6673385-6673481:-1:exon
so has part: feature:6670788-6670930:-1:exon
so has part: feature:6669467-6669625:-1:exon
so has part: feature:6669189-6669383:-1:exon

XP_032741523.1
type: Protein
SIO_000068: ncbiprotein

position:6669189:-1
position: 6669189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6678115:-1
position: 6678115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6678085-6678115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6677285-6677399:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6677085-6677202:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6674873-6675020:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6673874-6674032:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6673583-6673671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6673385-6673481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6670788-6670930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6669467-6669625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6669189-6669383:-1:exon

Dele1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Dele1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death ligand signal enhancer isoform X1
translation: MWRLTGILGRGRGCLQALPRLLGPGFRGITPKPTSSDGPQTTSTTLPLPRVNFDRSGSHGSKRNRDPKCCGWKEAFHWMSAHVSPNTLRDAVSWGTLAVLALHLARQIHFHAPLVAGPQSAERCSWHSPLYRFLSSSWWHPHSSLRRHVLPSPDCPAPRNTGLREPRLGQEEPSARSQGLPSDSSLKPGLLNLPEEEPGDFGFLNASRDFTSQAKAAEAGPPGGKNEQDKPKALPLEEAVTSIQQLFQLSVAIAFNFLGTENIKTGDYTAAFSYFQKAADRGYSKAQYNVGLCLEHGRGTSRDLSKAILFYHLAAVQGHSLAQYRYARCLLQSPGSVSDPEQQRAVSLLRQAADSGLTEAQAFLGVLFTKEPHLDEQRAVKYLWLAASNGVRMRSLVCACWGASLIRKGIWKLVLSSGVWYVF
SIO_010081: Dele1
subclass of: SO_0000673
so part of: Dele1
location: complement(join(6669189..6669383,6669467..6669625,6670788..6670930,6673385..6673481,6673583..6673671,6673874..6674032,6674873..6675020,6677085..6677202,6677285..6677399,6678067..6678115))
location: region:6669189-6678115:-1
so has part: feature:6678067-6678115:-1:exon
so has part: feature:6677285-6677399:-1:exon
so has part: feature:6677085-6677202:-1:exon
so has part: feature:6674873-6675020:-1:exon
so has part: feature:6673874-6674032:-1:exon
so has part: feature:6673583-6673671:-1:exon
so has part: feature:6673385-6673481:-1:exon
so has part: feature:6670788-6670930:-1:exon
so has part: feature:6669467-6669625:-1:exon
so has part: feature:6669189-6669383:-1:exon

XP_032741522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6678067-6678115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6677285-6677399:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6677085-6677202:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6674873-6675020:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6673874-6674032:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6673583-6673671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6673385-6673481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6670788-6670930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6669467-6669625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6669189-6669383:-1:exon

Pcdh1
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Pcdh1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6719737..6733596
location: region:6719737-6733596:1
so has part: feature:6719737-6733596:1:exon
subclass of: SO_0000010

116884276
type: Gene
SIO_000068: ncbigene

position:6719737:1
position: 6719737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6733596:1
position: 6733596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6719737-6733596:1:exon

Pcdh1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Pcdh1
product: protocadherin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032885359.1
SIO_010081: Pcdh1
subclass of: SO_0000673
so part of: Pcdh1
location: join(6719737..6720005,6726863..6727725,6730756..6733596)
location: region:6719737-6733596:1
so has part: feature:6719737-6720005:1:exon
so has part: feature:6726863-6727725:1:exon
so has part: feature:6730756-6733596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6719737-6720005:1:exon

position:6720005:1
position: 6720005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6726863-6727725:1:exon

position:6726863:1
position: 6726863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6727725:1
position: 6727725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6730756-6733596:1:exon

position:6730756:1
position: 6730756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pcdh1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Pcdh1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1
translation: MRRRKTVLLILEPARMGPLRPSPGPGGQRLLLPPLLLALLLLLAPSASHTTQVVYKVPEEQPPNTLIGSLAADYGLPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQNQISGSPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGANPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLVHSLDTPLDIDIAGDPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPKPSGKAAKGSKSKGKKSKSPKPVKPVEDEDDTGLQKSLKFNLMSDAPGDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDYSYRTNPPKYPSKQVGQPFRLSTPQPPPHPYHGAIWTEVWE
SIO_010081: Pcdh1
subclass of: SO_0000673
so part of: Pcdh1
location: join(6719987..6720005,6726863..6727725,6730756..6733035)
location: region:6719987-6733035:1
so has part: feature:6719987-6720005:1:exon
so has part: feature:6726863-6727725:1:exon
so has part: feature:6730756-6733035:1:exon

XP_032741250.1
type: Protein
SIO_000068: ncbiprotein

position:6719987:1
position: 6719987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6733035:1
position: 6733035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6719987-6720005:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6726863-6727725:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6730756-6733035:1:exon

LOC116884277
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884277
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6739497..6741912
location: region:6739497-6741912:1
so has part: feature:6739497-6741912:1:exon
subclass of: SO_0000010

116884277
type: Gene
SIO_000068: ncbigene

position:6739497:1
position: 6739497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6741912:1
position: 6741912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6739497-6741912:1:exon

LOC116884277
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884277
product: protocadherin 18-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032885360.1
SIO_010081: LOC116884277
subclass of: SO_0000673
so part of: LOC116884277
location: join(6739497..6740253,6740584..6741912)
location: region:6739497-6741912:1
so has part: feature:6739497-6740253:1:exon
so has part: feature:6740584-6741912:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6739497-6740253:1:exon

position:6740253:1
position: 6740253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6740584-6741912:1:exon

position:6740584:1
position: 6740584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116884277
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884277
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin 18-like
translation: MTGTCTRECSEFGHSDTCWMPGQSSPSRRTKSSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHDSCKDSATLEEIPLTQTSDFPPTATPASAQTAAKREIYL
SIO_010081: LOC116884277
subclass of: SO_0000673
so part of: LOC116884277
location: 6740610..6740981
location: region:6740610-6740981:1
so has part: feature:6740610-6740981:1:exon

XP_032741251.1
type: Protein
SIO_000068: ncbiprotein

position:6740610:1
position: 6740610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6740981:1
position: 6740981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6740610-6740981:1:exon

Arap3
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Arap3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6923907..6949931
location: region:6923907-6949931:1
so has part: feature:6923907-6949931:1:exon
subclass of: SO_0000010

116884678
type: Gene
SIO_000068: ncbigene

position:6923907:1
position: 6923907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6949931:1
position: 6949931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6923907-6949931:1:exon

Arap3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Arap3
product: ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885854.1
SIO_010081: Arap3
subclass of: SO_0000673
so part of: Arap3
location: join(6923907..6923952,6925653..6926158,6926261..6926322,6926421..6926532,6930834..6931025,6931167..6931236,6931472..6931592,6931673..6931857,6931943..6932049,6932488..6932687,6932792..6932877,6933009..6933191,6933350..6933485,6934094..6934210,6934633..6934780,6934878..6934980,6936944..6937163,6937774..6937837,6938078..6938240,6940296..6940508,6941134..6941239,6942312..6942459,6942734..6942802,6943974..6944048,6944252..6944366,6946443..6946571,6946652..6946785,6947010..6947092,6947187..6947222,6947909..6947972,6948083..6948220,6948445..6948483,6948921..6949931)
location: region:6923907-6949931:1
so has part: feature:6923907-6923952:1:exon
so has part: feature:6925653-6926158:1:exon
so has part: feature:6926261-6926322:1:exon
so has part: feature:6926421-6926532:1:exon
so has part: feature:6930834-6931025:1:exon
so has part: feature:6931167-6931236:1:exon
so has part: feature:6931472-6931592:1:exon
so has part: feature:6931673-6931857:1:exon
so has part: feature:6931943-6932049:1:exon
so has part: feature:6932488-6932687:1:exon
so has part: feature:6932792-6932877:1:exon
so has part: feature:6933009-6933191:1:exon
so has part: feature:6933350-6933485:1:exon
so has part: feature:6934094-6934210:1:exon
so has part: feature:6934633-6934780:1:exon
so has part: feature:6934878-6934980:1:exon
so has part: feature:6936944-6937163:1:exon
so has part: feature:6937774-6937837:1:exon
so has part: feature:6938078-6938240:1:exon
so has part: feature:6940296-6940508:1:exon
so has part: feature:6941134-6941239:1:exon
so has part: feature:6942312-6942459:1:exon
so has part: feature:6942734-6942802:1:exon
so has part: feature:6943974-6944048:1:exon
so has part: feature:6944252-6944366:1:exon
so has part: feature:6946443-6946571:1:exon
so has part: feature:6946652-6946785:1:exon
so has part: feature:6947010-6947092:1:exon
so has part: feature:6947187-6947222:1:exon
so has part: feature:6947909-6947972:1:exon
so has part: feature:6948083-6948220:1:exon
so has part: feature:6948445-6948483:1:exon
so has part: feature:6948921-6949931:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6923907-6923952:1:exon

position:6923952:1
position: 6923952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6925653-6926158:1:exon

position:6925653:1
position: 6925653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6926158:1
position: 6926158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6926261-6926322:1:exon

position:6926261:1
position: 6926261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6926322:1
position: 6926322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6926421-6926532:1:exon

position:6926421:1
position: 6926421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6926532:1
position: 6926532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6930834-6931025:1:exon

position:6930834:1
position: 6930834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6931025:1
position: 6931025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6931167-6931236:1:exon

position:6931167:1
position: 6931167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6931236:1
position: 6931236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6931472-6931592:1:exon

position:6931472:1
position: 6931472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6931592:1
position: 6931592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6931673-6931857:1:exon

position:6931673:1
position: 6931673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6931857:1
position: 6931857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6931943-6932049:1:exon

position:6931943:1
position: 6931943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6932049:1
position: 6932049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6932488-6932687:1:exon

position:6932488:1
position: 6932488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6932687:1
position: 6932687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6932792-6932877:1:exon

position:6932792:1
position: 6932792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6932877:1
position: 6932877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6933009-6933191:1:exon

position:6933009:1
position: 6933009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6933191:1
position: 6933191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6933350-6933485:1:exon

position:6933350:1
position: 6933350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6933485:1
position: 6933485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6934094-6934210:1:exon

position:6934094:1
position: 6934094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6934210:1
position: 6934210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6934633-6934780:1:exon

position:6934633:1
position: 6934633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6934780:1
position: 6934780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6934878-6934980:1:exon

position:6934878:1
position: 6934878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6934980:1
position: 6934980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6936944-6937163:1:exon

position:6936944:1
position: 6936944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6937163:1
position: 6937163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6937774-6937837:1:exon

position:6937774:1
position: 6937774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6937837:1
position: 6937837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6938078-6938240:1:exon

position:6938078:1
position: 6938078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6938240:1
position: 6938240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6940296-6940508:1:exon

position:6940296:1
position: 6940296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6940508:1
position: 6940508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6941134-6941239:1:exon

position:6941134:1
position: 6941134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6941239:1
position: 6941239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6942312-6942459:1:exon

position:6942312:1
position: 6942312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6942459:1
position: 6942459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6942734-6942802:1:exon

position:6942734:1
position: 6942734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6942802:1
position: 6942802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6943974-6944048:1:exon

position:6943974:1
position: 6943974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6944048:1
position: 6944048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6944252-6944366:1:exon

position:6944252:1
position: 6944252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6944366:1
position: 6944366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:6946443-6946571:1:exon

position:6946443:1
position: 6946443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6946571:1
position: 6946571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:6946652-6946785:1:exon

position:6946652:1
position: 6946652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6946785:1
position: 6946785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:6947010-6947092:1:exon

position:6947010:1
position: 6947010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6947092:1
position: 6947092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:6947187-6947222:1:exon

position:6947187:1
position: 6947187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6947222:1
position: 6947222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:6947909-6947972:1:exon

position:6947909:1
position: 6947909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6947972:1
position: 6947972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:6948083-6948220:1:exon

position:6948083:1
position: 6948083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6948220:1
position: 6948220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:6948445-6948483:1:exon

position:6948445:1
position: 6948445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6948483:1
position: 6948483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:6948921-6949931:1:exon

position:6948921:1
position: 6948921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Arap3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Arap3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
translation: MEPTPSPAPDAQPSKPVPKPRTVFGLSNPANAQKPGLNTIFWNPEVSRNSECTQRSPTVLPSSSEQPSALNTMEMMPNAIYFGLDLRGRAQAAQDLTPDSSQATVPTPAFRPTTGTVHIMDPGCLYYGVQPVGVPGAPDRRDGRGVCQERAEHRQDRETREDAGYASLELPGDSILSLPTQDAETSDDLISPYASFSSTADRPVPLLSGWLDKLSPQGNYVFQRRFVQFNGRSLMYFGSDKDPFPKGVIPLTAIEMTRSSKDNKFQVITGQRVFVFRTESEAQRDIWCSTLQSCLKEQRLLGHPRPPHPPRPLRTGMLELRGHKAKVFAALIPGELALYKSEQAFSLGIGICFIELQGCSVRETKSRSFDLLTPHRCFSFTAESGGARQSWAVALQEAVTETLSDYEVAEKVWSNPANRHCADCRASRPDWAAVNLGVVICKQCAGQHRALGSGISKVQSLKLDTSVWTNEIVQLFIVLGNDRANCFWAGALPPGEGLHPDSAPGPRGEFISRKYKLGLYRKPHPRHPDHSQLLQALCAAMVGPNLLKNMTQLLCVEASEGEEPLSPSALNGSLLSLLPSDSSPGVYNEVVVPATYRGFLYCGPISNKAGAPPLRRGRDAPPRLWCVLGAALEMFASESSPEPLSLLQPQDVICLGISPPPADSGDLDRFPFSFELILTGGRIQHFATDGADGLEAWISAVGKWFSPLSCHQLLGPGLLRMGRLWLRSPSHAGLAPGLWLSGFGLLRGDHLFLCPAPGPGPPAPEDMVHLRRLQEISVVSAADTPDKKEHLVLVETGRTLYLQGEGRLDFAAWNTAIGGAAGGGGTGLQEQQMXRGDIPIIVDACISFVTQHGLRLEGVYRKGGARARSLRLLAEFRRDARSVKLRPREHFVEDVTDTLKRFFRELDDPVTSARLLPRWREAAELPQKNQRLEKYKEVISCLPRVNRRTLATLIGHLYRVQKCAALNQMCTRNLALLFAPSVFQTDGRGEHEVRVLQELIDGYISVFDIDSDQAAQIDLEVSLITTWKDVQLSQAGDLIMEVYIEQQLPDNCVTLKVSPTLTAEELTNQVLEMRGAASGTDLWVTFEILDHGELERPLHPKEKVLEQALQWCQLPEPCSASLLLRKVSMAHAGCLFTGVRRESPRVGLLRCREEPPRLLGSRFQERFFLVRGRCLLLLKEKKSSKPEREWSLEGAKVYLGIRKKLKPPTPWGFTLILEKMHLCLSCTDEGEMWDWTTSILKAQHDDQQSVVLRRHSSSDLARQKFGTMPLLPIRGDDSGATLLSANQTLRRLHNRRTLSMFFPMKSSQGSVEEQDELEEPVYEEPVYEEVGAFPELTKDMTSTWEWSTKPDTPLTSQRSFDQTPLSKASMLVQEERIPEPPPGPPSKSSPQARGSLEEQLLQELNNLILRKGEPATCPESPSQPTSPQSPSPTSLLTQTPSLPTQIPCASNPPSSQPLT
SIO_010081: Arap3
subclass of: SO_0000673
so part of: Arap3
location: join(6925872..6926158,6926261..6926322,6926421..6926532,6930834..6931025,6931167..6931236,6931472..6931592,6931673..6931857,6931943..6932049,6932488..6932687,6932792..6932877,6933009..6933191,6933350..6933485,6934094..6934210,6934633..6934780,6934878..6934980,6936944..6937163,6937774..6937837,6938078..6938240,6940296..6940508,6941134..6941239,6942312..6942459,6942734..6942802,6943974..6944048,6944252..6944366,6946443..6946571,6946652..6946785,6947010..6947092,6947187..6947222,6947909..6947972,6948083..6948220,6948445..6948483,6948921..6949394)
location: region:6925872-6949394:1
so has part: feature:6925872-6926158:1:exon
so has part: feature:6926261-6926322:1:exon
so has part: feature:6926421-6926532:1:exon
so has part: feature:6930834-6931025:1:exon
so has part: feature:6931167-6931236:1:exon
so has part: feature:6931472-6931592:1:exon
so has part: feature:6931673-6931857:1:exon
so has part: feature:6931943-6932049:1:exon
so has part: feature:6932488-6932687:1:exon
so has part: feature:6932792-6932877:1:exon
so has part: feature:6933009-6933191:1:exon
so has part: feature:6933350-6933485:1:exon
so has part: feature:6934094-6934210:1:exon
so has part: feature:6934633-6934780:1:exon
so has part: feature:6934878-6934980:1:exon
so has part: feature:6936944-6937163:1:exon
so has part: feature:6937774-6937837:1:exon
so has part: feature:6938078-6938240:1:exon
so has part: feature:6940296-6940508:1:exon
so has part: feature:6941134-6941239:1:exon
so has part: feature:6942312-6942459:1:exon
so has part: feature:6942734-6942802:1:exon
so has part: feature:6943974-6944048:1:exon
so has part: feature:6944252-6944366:1:exon
so has part: feature:6946443-6946571:1:exon
so has part: feature:6946652-6946785:1:exon
so has part: feature:6947010-6947092:1:exon
so has part: feature:6947187-6947222:1:exon
so has part: feature:6947909-6947972:1:exon
so has part: feature:6948083-6948220:1:exon
so has part: feature:6948445-6948483:1:exon
so has part: feature:6948921-6949394:1:exon

XP_032741745.1
type: Protein
SIO_000068: ncbiprotein

position:6925872:1
position: 6925872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6949394:1
position: 6949394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6925872-6926158:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6926261-6926322:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6926421-6926532:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6930834-6931025:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6931167-6931236:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6931472-6931592:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6931673-6931857:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6931943-6932049:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6932488-6932687:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6932792-6932877:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6933009-6933191:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6933350-6933485:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6934094-6934210:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6934633-6934780:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6934878-6934980:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6936944-6937163:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6937774-6937837:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6938078-6938240:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6940296-6940508:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6941134-6941239:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6942312-6942459:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6942734-6942802:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6943974-6944048:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6944252-6944366:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6946443-6946571:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6946652-6946785:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6947010-6947092:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6947187-6947222:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6947909-6947972:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6948083-6948220:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6948445-6948483:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6948921-6949394:1:exon

Fchsd1
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Fchsd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6952808..6963430
location: region:6952808-6963430:1
so has part: feature:6952808-6963430:1:exon
subclass of: SO_0000010

116884563
type: Gene
SIO_000068: ncbigene

position:6952808:1
position: 6952808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6963430:1
position: 6963430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6952808-6963430:1:exon

Fchsd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Fchsd1
product: FCH and double SH3 domains 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885705.1
SIO_010081: Fchsd1
subclass of: SO_0000673
so part of: Fchsd1
location: join(6952808..6952915,6953169..6953266,6953830..6953875,6954347..6954414,6954728..6954869,6954953..6955089,6955182..6955245,6956106..6956234,6956638..6956760,6956925..6957020,6957724..6957843,6958216..6958320,6958454..6958615,6959530..6959658,6959740..6959823,6959965..6960082,6960206..6960426,6961253..6961340,6962700..6962755,6962874..6963430)
location: region:6952808-6963430:1
so has part: feature:6952808-6952915:1:exon
so has part: feature:6953169-6953266:1:exon
so has part: feature:6953830-6953875:1:exon
so has part: feature:6954347-6954414:1:exon
so has part: feature:6954728-6954869:1:exon
so has part: feature:6954953-6955089:1:exon
so has part: feature:6955182-6955245:1:exon
so has part: feature:6956106-6956234:1:exon
so has part: feature:6956638-6956760:1:exon
so has part: feature:6956925-6957020:1:exon
so has part: feature:6957724-6957843:1:exon
so has part: feature:6958216-6958320:1:exon
so has part: feature:6958454-6958615:1:exon
so has part: feature:6959530-6959658:1:exon
so has part: feature:6959740-6959823:1:exon
so has part: feature:6959965-6960082:1:exon
so has part: feature:6960206-6960426:1:exon
so has part: feature:6961253-6961340:1:exon
so has part: feature:6962700-6962755:1:exon
so has part: feature:6962874-6963430:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6952808-6952915:1:exon

position:6952915:1
position: 6952915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6953169-6953266:1:exon

position:6953169:1
position: 6953169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6953266:1
position: 6953266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6953830-6953875:1:exon

position:6953830:1
position: 6953830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6953875:1
position: 6953875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6954347-6954414:1:exon

position:6954347:1
position: 6954347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6954414:1
position: 6954414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6954728-6954869:1:exon

position:6954728:1
position: 6954728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6954869:1
position: 6954869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6954953-6955089:1:exon

position:6954953:1
position: 6954953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6955089:1
position: 6955089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6955182-6955245:1:exon

position:6955182:1
position: 6955182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6955245:1
position: 6955245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6956106-6956234:1:exon

position:6956106:1
position: 6956106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6956234:1
position: 6956234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6956638-6956760:1:exon

position:6956638:1
position: 6956638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6956760:1
position: 6956760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6956925-6957020:1:exon

position:6956925:1
position: 6956925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6957020:1
position: 6957020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6957724-6957843:1:exon

position:6957724:1
position: 6957724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6957843:1
position: 6957843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6958216-6958320:1:exon

position:6958216:1
position: 6958216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6958320:1
position: 6958320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6958454-6958615:1:exon

position:6958454:1
position: 6958454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6958615:1
position: 6958615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6959530-6959658:1:exon

position:6959530:1
position: 6959530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6959658:1
position: 6959658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6959740-6959823:1:exon

position:6959740:1
position: 6959740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6959823:1
position: 6959823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6959965-6960082:1:exon

position:6959965:1
position: 6959965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6960082:1
position: 6960082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6960206-6960426:1:exon

position:6960206:1
position: 6960206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6960426:1
position: 6960426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6961253-6961340:1:exon

position:6961253:1
position: 6961253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6961340:1
position: 6961340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6962700-6962755:1:exon

position:6962700:1
position: 6962700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6962755:1
position: 6962755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6962874-6963430:1:exon

position:6962874:1
position: 6962874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fchsd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Fchsd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-BAR and double SH3 domains protein 1
translation: MQPPPRKVKPAQEVKLRFLEQLSILQTRQQREADLLEDIRSYSKQRAAIEREYGQALQKLAGPFLKREGQRSGEIDSRARTVFGAWRCLLDATVAGGQTRLQASDRYRDLAGGTGRSAKEQVLRKGTESLQQAQAEVLQSVRELSRSRKLYGQRERVWALAQEKAADVQARLNRNDHGIFHSRTSLQKLSTKLSAQSAQYSQQLRAARNEYLLNLVATNAHLAHYYQEELPALLKVLVSELSEYLRDPLTLLGHTELEAAEMILEHARHGGKAASQVNWEQDVKLFLQGPGVFSPTPPQQFQPAGADQVRALERGAGGMAEESGLEREVQRWTSRAARDYKIQHHGHRVLQRLELRRQQAPEREAPGVEQRIQEVRENIRRAQVSQVKGAARLALLQEAGLDVQRWLKPAMTQAQDEVEQERRLSEARLSQRDLSPTAEDAELSDFDECEEAGELFEEPAPPALATRPLPCPAHVVFGYQAGREDELTITEGEWLEVIEEGDADEWVKARNQHGEAGFVPERYLNFPDLSLPESSHGSDNPSGAEPTAFLARALYSYIGQSEEELSFPEGALIRLLPRAQDGVDDGFWRGEFGGHVGVFPSLLVEELLGPPGPPELSDPEQTLPSPSPPSFSPPAPTCALDGSPAPALPSDKVIDCPGPLDMMVPRLRPMRPPPPPPAKAPDPGHPDPLT
SIO_010081: Fchsd1
subclass of: SO_0000673
so part of: Fchsd1
location: join(6952895..6952915,6953169..6953266,6953830..6953875,6954347..6954414,6954728..6954869,6954953..6955089,6955182..6955245,6956106..6956234,6956638..6956760,6956925..6957020,6957724..6957843,6958216..6958320,6958454..6958615,6959530..6959658,6959740..6959823,6959965..6960082,6960206..6960426,6961253..6961340,6962700..6962755,6962874..6962939)
location: region:6952895-6962939:1
so has part: feature:6952895-6952915:1:exon
so has part: feature:6953169-6953266:1:exon
so has part: feature:6953830-6953875:1:exon
so has part: feature:6954347-6954414:1:exon
so has part: feature:6954728-6954869:1:exon
so has part: feature:6954953-6955089:1:exon
so has part: feature:6955182-6955245:1:exon
so has part: feature:6956106-6956234:1:exon
so has part: feature:6956638-6956760:1:exon
so has part: feature:6956925-6957020:1:exon
so has part: feature:6957724-6957843:1:exon
so has part: feature:6958216-6958320:1:exon
so has part: feature:6958454-6958615:1:exon
so has part: feature:6959530-6959658:1:exon
so has part: feature:6959740-6959823:1:exon
so has part: feature:6959965-6960082:1:exon
so has part: feature:6960206-6960426:1:exon
so has part: feature:6961253-6961340:1:exon
so has part: feature:6962700-6962755:1:exon
so has part: feature:6962874-6962939:1:exon

XP_032741596.1
type: Protein
SIO_000068: ncbiprotein

position:6952895:1
position: 6952895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6962939:1
position: 6962939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6952895-6952915:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6953169-6953266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6953830-6953875:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6954347-6954414:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6954728-6954869:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6954953-6955089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6955182-6955245:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6956106-6956234:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6956638-6956760:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6956925-6957020:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6957724-6957843:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6958216-6958320:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6958454-6958615:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6959530-6959658:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6959740-6959823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6959965-6960082:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6960206-6960426:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6961253-6961340:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6962700-6962755:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6962874-6962939:1:exon

Rell2
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Rell2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6963376..6966955)
location: region:6963376-6966955:-1
so has part: feature:6963376-6966955:-1:exon
subclass of: SO_0000010

116884562
type: Gene
SIO_000068: ncbigene

position:6963376:-1
position: 6963376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6966955:-1
position: 6966955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6963376-6966955:-1:exon

Rell2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Rell2
product: RELT like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032885703.1
SIO_010081: Rell2
subclass of: SO_0000673
so part of: Rell2
location: complement(join(6963376..6963781,6963964..6964023,6964143..6964515,6964762..6964947,6965368..6965434,6965529..6965594,6965954..6966193,6966599..6966955))
location: region:6963376-6966955:-1
so has part: feature:6966599-6966955:-1:exon
so has part: feature:6965954-6966193:-1:exon
so has part: feature:6965529-6965594:-1:exon
so has part: feature:6965368-6965434:-1:exon
so has part: feature:6964762-6964947:-1:exon
so has part: feature:6964143-6964515:-1:exon
so has part: feature:6963964-6964023:-1:exon
so has part: feature:6963376-6963781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6966599-6966955:-1:exon

position:6966599:-1
position: 6966599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6965954-6966193:-1:exon

position:6965954:-1
position: 6965954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6966193:-1
position: 6966193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6965529-6965594:-1:exon

position:6965529:-1
position: 6965529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6965594:-1
position: 6965594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6965368-6965434:-1:exon

position:6965368:-1
position: 6965368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6965434:-1
position: 6965434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6964762-6964947:-1:exon

position:6964762:-1
position: 6964762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6964947:-1
position: 6964947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6964143-6964515:-1:exon

position:6964143:-1
position: 6964143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6964515:-1
position: 6964515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6963964-6964023:-1:exon

position:6963964:-1
position: 6963964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6964023:-1
position: 6964023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6963376-6963781:-1:exon

position:6963781:-1
position: 6963781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rell2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Rell2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RELT-like protein 2
translation: MSEPQPGLEPPQHGLYMLFLLVLVFFLMGLVGFMICHVLKKKGYRCRTSRGSEPDDAQLQPPEDDDVNEDTVERIVRCIIQNEANAEALKEMLGDSEGEGTVQLSSVDATSSLQDGAPSHHHTVHLGSAAPCIHCSRSKRPPLVRQGRSKEGKGRPRPGETTVFSVGRFRVTHIEKRYGLHEHRDGSPTDRSWGSGGGQEPGVSQVAGGQPRTGTAAIERLLPEPPPSQAAATHPVQNGRLKDASLVPCTLEGTPGTSAELNVGTRGTGPSPGLPSQEANGQPTKLDTSGQQDSLPPEAGGM
SIO_010081: Rell2
subclass of: SO_0000673
so part of: Rell2
location: complement(join(6963991..6964023,6964143..6964515,6964762..6964947,6965368..6965434,6965529..6965594,6965954..6966137))
location: region:6963991-6966137:-1
so has part: feature:6965954-6966137:-1:exon
so has part: feature:6965529-6965594:-1:exon
so has part: feature:6965368-6965434:-1:exon
so has part: feature:6964762-6964947:-1:exon
so has part: feature:6964143-6964515:-1:exon
so has part: feature:6963991-6964023:-1:exon

XP_032741594.1
type: Protein
SIO_000068: ncbiprotein

position:6963991:-1
position: 6963991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6966137:-1
position: 6966137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6965954-6966137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6965529-6965594:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6965368-6965434:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6964762-6964947:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6964143-6964515:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6963991-6964023:-1:exon

Hdac3
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Hdac3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6967522..6986716
location: region:6967522-6986716:1
so has part: feature:6967522-6986716:1:exon
subclass of: SO_0000010

116884520
type: Gene
SIO_000068: ncbigene

position:6967522:1
position: 6967522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6986716:1
position: 6986716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6967522-6986716:1:exon

Hdac3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Hdac3
product: histone deacetylase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 26 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885654.1
SIO_010081: Hdac3
subclass of: SO_0000673
so part of: Hdac3
location: join(6967522..6967649,6967744..6967826,6969704..6969846,6977643..6977724,6977849..6977905,6978022..6978077,6978409..6978542,6979103..6979183,6979565..6979638,6979796..6979860,6981655..6981744,6981843..6981901,6982150..6982229,6982525..6982682,6986031..6986716)
location: region:6967522-6986716:1
so has part: feature:6967522-6967649:1:exon
so has part: feature:6967744-6967826:1:exon
so has part: feature:6969704-6969846:1:exon
so has part: feature:6977643-6977724:1:exon
so has part: feature:6977849-6977905:1:exon
so has part: feature:6978022-6978077:1:exon
so has part: feature:6978409-6978542:1:exon
so has part: feature:6979103-6979183:1:exon
so has part: feature:6979565-6979638:1:exon
so has part: feature:6979796-6979860:1:exon
so has part: feature:6981655-6981744:1:exon
so has part: feature:6981843-6981901:1:exon
so has part: feature:6982150-6982229:1:exon
so has part: feature:6982525-6982682:1:exon
so has part: feature:6986031-6986716:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6967522-6967649:1:exon

position:6967649:1
position: 6967649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6967744-6967826:1:exon

position:6967744:1
position: 6967744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6967826:1
position: 6967826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6969704-6969846:1:exon

position:6969704:1
position: 6969704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6969846:1
position: 6969846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6977643-6977724:1:exon

position:6977643:1
position: 6977643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6977724:1
position: 6977724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6977849-6977905:1:exon

position:6977849:1
position: 6977849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6977905:1
position: 6977905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6978022-6978077:1:exon

position:6978022:1
position: 6978022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6978077:1
position: 6978077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6978409-6978542:1:exon

position:6978409:1
position: 6978409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6978542:1
position: 6978542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6979103-6979183:1:exon

position:6979103:1
position: 6979103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6979183:1
position: 6979183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6979565-6979638:1:exon

position:6979565:1
position: 6979565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6979638:1
position: 6979638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6979796-6979860:1:exon

position:6979796:1
position: 6979796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6979860:1
position: 6979860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6981655-6981744:1:exon

position:6981655:1
position: 6981655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6981744:1
position: 6981744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6981843-6981901:1:exon

position:6981843:1
position: 6981843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6981901:1
position: 6981901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6982150-6982229:1:exon

position:6982150:1
position: 6982150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6982229:1
position: 6982229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6982525-6982682:1:exon

position:6982525:1
position: 6982525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6982682:1
position: 6982682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6986031-6986716:1:exon

position:6986031:1
position: 6986031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Hdac3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Hdac3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 3
translation: MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDNDKESDVEI
SIO_010081: Hdac3
subclass of: SO_0000673
so part of: Hdac3
location: join(6967595..6967649,6967744..6967826,6969704..6969846,6977643..6977724,6977849..6977905,6978022..6978077,6978409..6978542,6979103..6979183,6979565..6979638,6979796..6979860,6981655..6981744,6981843..6981901,6982150..6982229,6982525..6982682,6986031..6986100)
location: region:6967595-6986100:1
so has part: feature:6967595-6967649:1:exon
so has part: feature:6967744-6967826:1:exon
so has part: feature:6969704-6969846:1:exon
so has part: feature:6977643-6977724:1:exon
so has part: feature:6977849-6977905:1:exon
so has part: feature:6978022-6978077:1:exon
so has part: feature:6978409-6978542:1:exon
so has part: feature:6979103-6979183:1:exon
so has part: feature:6979565-6979638:1:exon
so has part: feature:6979796-6979860:1:exon
so has part: feature:6981655-6981744:1:exon
so has part: feature:6981843-6981901:1:exon
so has part: feature:6982150-6982229:1:exon
so has part: feature:6982525-6982682:1:exon
so has part: feature:6986031-6986100:1:exon

XP_032741545.1
type: Protein
SIO_000068: ncbiprotein

position:6967595:1
position: 6967595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6986100:1
position: 6986100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6967595-6967649:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6967744-6967826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6969704-6969846:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6977643-6977724:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6977849-6977905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6978022-6978077:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6978409-6978542:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6979103-6979183:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6979565-6979638:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6979796-6979860:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6981655-6981744:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6981843-6981901:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6982150-6982229:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6982525-6982682:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6986031-6986100:1:exon

Diaph1
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: Diaph1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6988249..7083665
location: region:6988249-7083665:1
so has part: feature:6988249-7083665:1:exon
subclass of: SO_0000010

116884727
type: Gene
SIO_000068: ncbigene

position:6988249:1
position: 6988249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7083665:1
position: 7083665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6988249-7083665:1:exon

Diaph1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Diaph1
product: diaphanous related formin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 ESTs, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032885916.1
SIO_010081: Diaph1
subclass of: SO_0000673
so part of: Diaph1
location: join(6988249..6988482,7018327..7018482,7019709..7019810,7020096..7020226,7020403..7020489,7021337..7021400,7022579..7022718,7025564..7025672,7026643..7026753,7026900..7027018,7027835..7027951,7028953..7029068,7029783..7029847,7031397..7031576,7032771..7033469,7034125..7034239,7034676..7034684,7067063..7067161,7070620..7070714,7071021..7071122,7071351..7071590,7071701..7071830,7072692..7072816,7073597..7073761,7073865..7074000,7075820..7075906,7081798..7083665)
location: region:6988249-7083665:1
so has part: feature:6988249-6988482:1:exon
so has part: feature:7018327-7018482:1:exon
so has part: feature:7019709-7019810:1:exon
so has part: feature:7020096-7020226:1:exon
so has part: feature:7020403-7020489:1:exon
so has part: feature:7021337-7021400:1:exon
so has part: feature:7022579-7022718:1:exon
so has part: feature:7025564-7025672:1:exon
so has part: feature:7026643-7026753:1:exon
so has part: feature:7026900-7027018:1:exon
so has part: feature:7027835-7027951:1:exon
so has part: feature:7028953-7029068:1:exon
so has part: feature:7029783-7029847:1:exon
so has part: feature:7031397-7031576:1:exon
so has part: feature:7032771-7033469:1:exon
so has part: feature:7034125-7034239:1:exon
so has part: feature:7034676-7034684:1:exon
so has part: feature:7067063-7067161:1:exon
so has part: feature:7070620-7070714:1:exon
so has part: feature:7071021-7071122:1:exon
so has part: feature:7071351-7071590:1:exon
so has part: feature:7071701-7071830:1:exon
so has part: feature:7072692-7072816:1:exon
so has part: feature:7073597-7073761:1:exon
so has part: feature:7073865-7074000:1:exon
so has part: feature:7075820-7075906:1:exon
so has part: feature:7081798-7083665:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6988249-6988482:1:exon

position:6988482:1
position: 6988482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7018327-7018482:1:exon

position:7018327:1
position: 7018327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7018482:1
position: 7018482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7019709-7019810:1:exon

position:7019709:1
position: 7019709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7019810:1
position: 7019810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7020096-7020226:1:exon

position:7020096:1
position: 7020096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7020226:1
position: 7020226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7020403-7020489:1:exon

position:7020403:1
position: 7020403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7020489:1
position: 7020489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7021337-7021400:1:exon

position:7021337:1
position: 7021337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7021400:1
position: 7021400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7022579-7022718:1:exon

position:7022579:1
position: 7022579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7022718:1
position: 7022718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7025564-7025672:1:exon

position:7025564:1
position: 7025564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7025672:1
position: 7025672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7026643-7026753:1:exon

position:7026643:1
position: 7026643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7026753:1
position: 7026753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7026900-7027018:1:exon

position:7026900:1
position: 7026900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7027018:1
position: 7027018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7027835-7027951:1:exon

position:7027835:1
position: 7027835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7027951:1
position: 7027951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7028953-7029068:1:exon

position:7028953:1
position: 7028953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7029068:1
position: 7029068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7029783-7029847:1:exon

position:7029783:1
position: 7029783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7029847:1
position: 7029847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7031397-7031576:1:exon

position:7031397:1
position: 7031397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7031576:1
position: 7031576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7032771-7033469:1:exon

position:7032771:1
position: 7032771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7033469:1
position: 7033469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7034125-7034239:1:exon

position:7034125:1
position: 7034125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7034239:1
position: 7034239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7034676-7034684:1:exon

position:7034676:1
position: 7034676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7034684:1
position: 7034684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7067063-7067161:1:exon

position:7067063:1
position: 7067063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7067161:1
position: 7067161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7070620-7070714:1:exon

position:7070620:1
position: 7070620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7070714:1
position: 7070714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7071021-7071122:1:exon

position:7071021:1
position: 7071021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7071122:1
position: 7071122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7071351-7071590:1:exon

position:7071351:1
position: 7071351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7071590:1
position: 7071590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7071701-7071830:1:exon

position:7071701:1
position: 7071701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7071830:1
position: 7071830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7072692-7072816:1:exon

position:7072692:1
position: 7072692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7072816:1
position: 7072816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7073597-7073761:1:exon

position:7073597:1
position: 7073597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7073761:1
position: 7073761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7073865-7074000:1:exon

position:7073865:1
position: 7073865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7074000:1
position: 7074000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7075820-7075906:1:exon

position:7075820:1
position: 7075820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7075906:1
position: 7075906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7081798-7083665:1:exon

position:7081798:1
position: 7081798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Diaph1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: Diaph1
product: diaphanous related formin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 50 ESTs, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885917.1
SIO_010081: Diaph1
subclass of: SO_0000673
so part of: Diaph1
location: join(6988276..6988482,7017114..7017140,7018327..7018482,7019709..7019810,7020096..7020226,7020403..7020489,7021337..7021400,7022579..7022718,7025564..7025672,7026643..7026753,7026900..7027018,7027835..7027951,7028953..7029068,7029783..7029847,7031397..7031576,7032771..7033469,7034125..7034239,7034676..7034684,7067063..7067161,7070620..7070714,7071021..7071122,7071351..7071590,7071701..7071830,7072692..7072816,7073597..7073761,7073865..7074000,7075820..7075906,7081798..7083665)
location: region:6988276-7083665:1
so has part: feature:6988276-6988482:1:exon
so has part: feature:7017114-7017140:1:exon
so has part: feature:7018327-7018482:1:exon
so has part: feature:7019709-7019810:1:exon
so has part: feature:7020096-7020226:1:exon
so has part: feature:7020403-7020489:1:exon
so has part: feature:7021337-7021400:1:exon
so has part: feature:7022579-7022718:1:exon
so has part: feature:7025564-7025672:1:exon
so has part: feature:7026643-7026753:1:exon
so has part: feature:7026900-7027018:1:exon
so has part: feature:7027835-7027951:1:exon
so has part: feature:7028953-7029068:1:exon
so has part: feature:7029783-7029847:1:exon
so has part: feature:7031397-7031576:1:exon
so has part: feature:7032771-7033469:1:exon
so has part: feature:7034125-7034239:1:exon
so has part: feature:7034676-7034684:1:exon
so has part: feature:7067063-7067161:1:exon
so has part: feature:7070620-7070714:1:exon
so has part: feature:7071021-7071122:1:exon
so has part: feature:7071351-7071590:1:exon
so has part: feature:7071701-7071830:1:exon
so has part: feature:7072692-7072816:1:exon
so has part: feature:7073597-7073761:1:exon
so has part: feature:7073865-7074000:1:exon
so has part: feature:7075820-7075906:1:exon
so has part: feature:7081798-7083665:1:exon

position:6988276:1
position: 6988276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6988276-6988482:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7017114-7017140:1:exon

position:7017114:1
position: 7017114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7017140:1
position: 7017140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7018327-7018482:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7019709-7019810:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7020096-7020226:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7020403-7020489:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7021337-7021400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7022579-7022718:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7025564-7025672:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7026643-7026753:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7026900-7027018:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7027835-7027951:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7028953-7029068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7029783-7029847:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7031397-7031576:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7032771-7033469:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7034125-7034239:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7034676-7034684:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7067063-7067161:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7070620-7070714:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7071021-7071122:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7071351-7071590:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7071701-7071830:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7072692-7072816:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7073597-7073761:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7073865-7074000:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7075820-7075906:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7081798-7083665:1:exon

Diaph1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Diaph1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 1 isoform X2
translation: MEPSGGGLGPGRGTRDKKKGRSPDELPATGGDGGKHKKFTLKRLMADELERFTSMRIKKEKEKPNSAHRNSSASYGDDPTAQSLQDISDDQVLVLFEQMLVDMNLNEEKQQPLREKDIVIKREMVSQYLHTSKAGMNQKESSRSAMMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMEEVERFQPLLDGLKSGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIDNDDMRVQLNVFDEQGDEDFFDLKGRLDDIRMEMDDFGEVFQIILNTVKDSKAEPHFLSILQHLLLVRNDYEARPQYYKLIEECVSQIVLHKNGTDPDFKCRHLQIDIEGLVDQMIDKTKVEKSEAKATELEKKLDSELTARHELQVEMKKMENDFEQKLQDLQGEKDALDSEKQQITTQKQDLEAEVSKLTGEVAKLSKELEDAKKEMASLSAVAVVPSVSSSAAVPQAPPLPGDSGTVIPPPPPPPPLPGGAVPPPPPPPLPAGTGIPPPPPLPGGACIPSSPQLFGSAAIPPPPPLPGATAIPPPPPLPGATAIPPPPPLPGATAIPPPPPLPGATGVPPPPPPLPGSVGVPPPPPLPGGPGLPPPPPPFPGAPGIPPPPPGMGVPPPPPFGFGIPAAPVLPFGLTPKKVYKPEVQLRRPNWSKFVAEDLSQDCFWTKVKEDRFENNELFAKLTLAFSAQTKTSKAKKDQEGGEEKKSVQKKKVKELKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSELKEEYDDLAESEQFGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSADQKMTLLHFLAELCETDHPDVLKFPDELAHVEKASRVSAENLQKNLDQMKKQIADVERDVQNFPAATDEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRAKLAKEKAEKERLEKQQKREQLIDMNAEGDETGVMDSLLEALQSGAAFRRKRGPRQVNRKAGCAVTSLLASELTKDDAVAASPVKVPKKSEGVTTILEEAKELVGRAS
SIO_010081: Diaph1
subclass of: SO_0000673
so part of: Diaph1
location: join(6988366..6988482,7017114..7017140,7018327..7018482,7019709..7019810,7020096..7020226,7020403..7020489,7021337..7021400,7022579..7022718,7025564..7025672,7026643..7026753,7026900..7027018,7027835..7027951,7028953..7029068,7029783..7029847,7031397..7031576,7032771..7033469,7034125..7034239,7034676..7034684,7067063..7067161,7070620..7070714,7071021..7071122,7071351..7071590,7071701..7071830,7072692..7072816,7073597..7073761,7073865..7074000,7075820..7075906,7081798..7081955)
location: region:6988366-7081955:1
so has part: feature:6988366-6988482:1:exon
so has part: feature:7017114-7017140:1:exon
so has part: feature:7018327-7018482:1:exon
so has part: feature:7019709-7019810:1:exon
so has part: feature:7020096-7020226:1:exon
so has part: feature:7020403-7020489:1:exon
so has part: feature:7021337-7021400:1:exon
so has part: feature:7022579-7022718:1:exon
so has part: feature:7025564-7025672:1:exon
so has part: feature:7026643-7026753:1:exon
so has part: feature:7026900-7027018:1:exon
so has part: feature:7027835-7027951:1:exon
so has part: feature:7028953-7029068:1:exon
so has part: feature:7029783-7029847:1:exon
so has part: feature:7031397-7031576:1:exon
so has part: feature:7032771-7033469:1:exon
so has part: feature:7034125-7034239:1:exon
so has part: feature:7034676-7034684:1:exon
so has part: feature:7067063-7067161:1:exon
so has part: feature:7070620-7070714:1:exon
so has part: feature:7071021-7071122:1:exon
so has part: feature:7071351-7071590:1:exon
so has part: feature:7071701-7071830:1:exon
so has part: feature:7072692-7072816:1:exon
so has part: feature:7073597-7073761:1:exon
so has part: feature:7073865-7074000:1:exon
so has part: feature:7075820-7075906:1:exon
so has part: feature:7081798-7081955:1:exon

XP_032741808.1
type: Protein
SIO_000068: ncbiprotein

position:6988366:1
position: 6988366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7081955:1
position: 7081955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6988366-6988482:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7017114-7017140:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7018327-7018482:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7019709-7019810:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7020096-7020226:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7020403-7020489:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7021337-7021400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7022579-7022718:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7025564-7025672:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7026643-7026753:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7026900-7027018:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7027835-7027951:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7028953-7029068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7029783-7029847:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7031397-7031576:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7032771-7033469:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7034125-7034239:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7034676-7034684:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7067063-7067161:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7070620-7070714:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7071021-7071122:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7071351-7071590:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7071701-7071830:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7072692-7072816:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7073597-7073761:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7073865-7074000:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7075820-7075906:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7081798-7081955:1:exon

Diaph1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: Diaph1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 1 isoform X1
translation: MEPSGGGLGPGRGTRDKKKGRSPDELPATGGDGGKHKKFLERFTSMRIKKEKEKPNSAHRNSSASYGDDPTAQSLQDISDDQVLVLFEQMLVDMNLNEEKQQPLREKDIVIKREMVSQYLHTSKAGMNQKESSRSAMMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMEEVERFQPLLDGLKSGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIDNDDMRVQLNVFDEQGDEDFFDLKGRLDDIRMEMDDFGEVFQIILNTVKDSKAEPHFLSILQHLLLVRNDYEARPQYYKLIEECVSQIVLHKNGTDPDFKCRHLQIDIEGLVDQMIDKTKVEKSEAKATELEKKLDSELTARHELQVEMKKMENDFEQKLQDLQGEKDALDSEKQQITTQKQDLEAEVSKLTGEVAKLSKELEDAKKEMASLSAVAVVPSVSSSAAVPQAPPLPGDSGTVIPPPPPPPPLPGGAVPPPPPPPLPAGTGIPPPPPLPGGACIPSSPQLFGSAAIPPPPPLPGATAIPPPPPLPGATAIPPPPPLPGATAIPPPPPLPGATGVPPPPPPLPGSVGVPPPPPLPGGPGLPPPPPPFPGAPGIPPPPPGMGVPPPPPFGFGIPAAPVLPFGLTPKKVYKPEVQLRRPNWSKFVAEDLSQDCFWTKVKEDRFENNELFAKLTLAFSAQTKTSKAKKDQEGGEEKKSVQKKKVKELKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSELKEEYDDLAESEQFGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSADQKMTLLHFLAELCETDHPDVLKFPDELAHVEKASRVSAENLQKNLDQMKKQIADVERDVQNFPAATDEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRAKLAKEKAEKERLEKQQKREQLIDMNAEGDETGVMDSLLEALQSGAAFRRKRGPRQVNRKAGCAVTSLLASELTKDDAVAASPVKVPKKSEGVTTILEEAKELVGRAS
SIO_010081: Diaph1
subclass of: SO_0000673
so part of: Diaph1
location: join(6988366..6988482,7018327..7018482,7019709..7019810,7020096..7020226,7020403..7020489,7021337..7021400,7022579..7022718,7025564..7025672,7026643..7026753,7026900..7027018,7027835..7027951,7028953..7029068,7029783..7029847,7031397..7031576,7032771..7033469,7034125..7034239,7034676..7034684,7067063..7067161,7070620..7070714,7071021..7071122,7071351..7071590,7071701..7071830,7072692..7072816,7073597..7073761,7073865..7074000,7075820..7075906,7081798..7081955)
location: region:6988366-7081955:1
so has part: feature:6988366-6988482:1:exon
so has part: feature:7018327-7018482:1:exon
so has part: feature:7019709-7019810:1:exon
so has part: feature:7020096-7020226:1:exon
so has part: feature:7020403-7020489:1:exon
so has part: feature:7021337-7021400:1:exon
so has part: feature:7022579-7022718:1:exon
so has part: feature:7025564-7025672:1:exon
so has part: feature:7026643-7026753:1:exon
so has part: feature:7026900-7027018:1:exon
so has part: feature:7027835-7027951:1:exon
so has part: feature:7028953-7029068:1:exon
so has part: feature:7029783-7029847:1:exon
so has part: feature:7031397-7031576:1:exon
so has part: feature:7032771-7033469:1:exon
so has part: feature:7034125-7034239:1:exon
so has part: feature:7034676-7034684:1:exon
so has part: feature:7067063-7067161:1:exon
so has part: feature:7070620-7070714:1:exon
so has part: feature:7071021-7071122:1:exon
so has part: feature:7071351-7071590:1:exon
so has part: feature:7071701-7071830:1:exon
so has part: feature:7072692-7072816:1:exon
so has part: feature:7073597-7073761:1:exon
so has part: feature:7073865-7074000:1:exon
so has part: feature:7075820-7075906:1:exon
so has part: feature:7081798-7081955:1:exon

XP_032741807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6988366-6988482:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7018327-7018482:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7019709-7019810:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7020096-7020226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7020403-7020489:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7021337-7021400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7022579-7022718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7025564-7025672:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7026643-7026753:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7026900-7027018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7027835-7027951:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7028953-7029068:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7029783-7029847:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7031397-7031576:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7032771-7033469:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7034125-7034239:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7034676-7034684:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7067063-7067161:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7070620-7070714:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7071021-7071122:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7071351-7071590:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7071701-7071830:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7072692-7072816:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7073597-7073761:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7073865-7074000:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7075820-7075906:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7081798-7081955:1:exon

LOC116884728
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7080364..7264458)
location: region:7080364-7264458:-1
so has part: feature:7080364-7264458:-1:exon
subclass of: SO_0000010

116884728
type: Gene
SIO_000068: ncbigene

position:7080364:-1
position: 7080364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7264458:-1
position: 7264458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7080364-7264458:-1:exon

LOC116884728
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 137 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004385890.1
SIO_010081: LOC116884728
so part of: LOC116884728
location: complement(join(7080364..7080381,7086857..7087373,7092080..7092168,7100477..7100535,7195586..7199497))
location: region:7080364-7199497:-1
so has part: feature:7195586-7199497:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7086857-7087373:-1:exon
so has part: feature:7080364-7080381:-1:exon

position:7199497:-1
position: 7199497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7195586-7199497:-1:exon

position:7195586:-1
position: 7195586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

position:7100477:-1
position: 7100477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7100535:-1
position: 7100535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

position:7092080:-1
position: 7092080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7092168:-1
position: 7092168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7086857-7087373:-1:exon

position:7086857:-1
position: 7086857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7087373:-1
position: 7087373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7080364-7080381:-1:exon

position:7080381:-1
position: 7080381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 73 ESTs, 125 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032885928.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7261663..7264453))
location: region:7085417-7264453:-1
so has part: feature:7261663-7264453:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7085417:-1
position: 7085417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7264453:-1
position: 7264453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7261663-7264453:-1:exon

position:7261663:-1
position: 7261663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 75 ESTs, 130 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032885927.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7254960..7257913))
location: region:7085417-7257913:-1
so has part: feature:7254960-7257913:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7257913:-1
position: 7257913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7254960-7257913:-1:exon

position:7254960:-1
position: 7254960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 72 ESTs, 128 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032885934.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7249758..7252449))
location: region:7085417-7252449:-1
so has part: feature:7249758-7252449:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7252449:-1
position: 7252449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7249758-7252449:-1:exon

position:7249758:-1
position: 7249758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 73 ESTs, 135 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032885932.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7238720..7241462))
location: region:7085417-7241462:-1
so has part: feature:7238720-7241462:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7241462:-1
position: 7241462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7238720-7241462:-1:exon

position:7238720:-1
position: 7238720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 77 ESTs, 95 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032885937.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7233737..7236397))
location: region:7085417-7236397:-1
so has part: feature:7233737-7236397:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7236397:-1
position: 7236397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7233737-7236397:-1:exon

position:7233737:-1
position: 7233737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 73 ESTs, 133 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032885926.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7229201..7233247))
location: region:7085417-7233247:-1
so has part: feature:7229201-7233247:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7233247:-1
position: 7233247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7229201-7233247:-1:exon

position:7229201:-1
position: 7229201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 73 ESTs, 138 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032885936.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7214071..7217668))
location: region:7085417-7217668:-1
so has part: feature:7214071-7217668:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7217668:-1
position: 7217668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7214071-7217668:-1:exon

position:7214071:-1
position: 7214071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 77 ESTs, 137 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032885918.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7206384..7209422))
location: region:7085417-7209422:-1
so has part: feature:7206384-7209422:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7209422:-1
position: 7209422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7206384-7209422:-1:exon

position:7206384:-1
position: 7206384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 75 ESTs, 137 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032885924.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7195586..7199497))
location: region:7085417-7199497:-1
so has part: feature:7195586-7199497:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7195586-7199497:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 73 ESTs, 141 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032885929.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7184906..7188039))
location: region:7085417-7188039:-1
so has part: feature:7184906-7188039:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7188039:-1
position: 7188039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7184906-7188039:-1:exon

position:7184906:-1
position: 7184906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 73 ESTs, 98 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032885931.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7179841..7182274))
location: region:7085417-7182274:-1
so has part: feature:7179841-7182274:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7182274:-1
position: 7182274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7179841-7182274:-1:exon

position:7179841:-1
position: 7179841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 74 ESTs, 178 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_032885930.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7175072..7178043))
location: region:7085417-7178043:-1
so has part: feature:7175072-7178043:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7178043:-1
position: 7178043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7175072-7178043:-1:exon

position:7175072:-1
position: 7175072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 73 ESTs, 143 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032885922.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7166673..7169287))
location: region:7085417-7169287:-1
so has part: feature:7166673-7169287:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7169287:-1
position: 7169287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7166673-7169287:-1:exon

position:7166673:-1
position: 7166673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 76 ESTs, 117 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032885933.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7161650..7164440))
location: region:7085417-7164440:-1
so has part: feature:7161650-7164440:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7164440:-1
position: 7164440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7161650-7164440:-1:exon

position:7161650:-1
position: 7161650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 72 ESTs, 179 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032885923.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7157304..7160052))
location: region:7085417-7160052:-1
so has part: feature:7157304-7160052:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7160052:-1
position: 7160052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7157304-7160052:-1:exon

position:7157304:-1
position: 7157304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 81 ESTs, 62 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032885921.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7118812..7122036))
location: region:7085417-7122036:-1
so has part: feature:7118812-7122036:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7122036:-1
position: 7122036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7118812-7122036:-1:exon

position:7118812:-1
position: 7118812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 72 ESTs, 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032885939.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7121212..7121719))
location: region:7085417-7121719:-1
so has part: feature:7121212-7121719:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7121719:-1
position: 7121719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7121212-7121719:-1:exon

position:7121212:-1
position: 7121212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 72 ESTs, 66 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032885920.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7107628..7111703))
location: region:7085417-7111703:-1
so has part: feature:7107628-7111703:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7111703:-1
position: 7111703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7107628-7111703:-1:exon

position:7107628:-1
position: 7107628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 73 ESTs, 67 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032885919.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7103533..7106103))
location: region:7085417-7106103:-1
so has part: feature:7103533-7106103:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7106103:-1
position: 7106103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7103533-7106103:-1:exon

position:7103533:-1
position: 7103533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 72 ESTs, 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032885941.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7105969..7106077))
location: region:7085417-7106077:-1
so has part: feature:7105969-7106077:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7106077:-1
position: 7106077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7105969-7106077:-1:exon

position:7105969:-1
position: 7105969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 72 ESTs, 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032885943.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7105955..7106026))
location: region:7085417-7106026:-1
so has part: feature:7105955-7106026:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7106026:-1
position: 7106026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7105955-7106026:-1:exon

position:7105955:-1
position: 7105955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 73 ESTs, 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032885938.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7104112..7105948))
location: region:7085417-7105948:-1
so has part: feature:7104112-7105948:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7105948:-1
position: 7105948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7104112-7105948:-1:exon

position:7104112:-1
position: 7104112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 72 ESTs, 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032885942.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7100922..7100980))
location: region:7085417-7100980:-1
so has part: feature:7100922-7100980:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7100980:-1
position: 7100980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7100922-7100980:-1:exon

position:7100922:-1
position: 7100922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 72 ESTs, 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032885940.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7085417..7087373,7092080..7092168,7100477..7100535,7100693..7100731))
location: region:7085417-7100731:-1
so has part: feature:7100693-7100731:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7085417-7087373:-1:exon

position:7100731:-1
position: 7100731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7100693-7100731:-1:exon

position:7100693:-1
position: 7100693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7085417-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A1 isoform X10
translation: MAIPEKLTGWSLLMLLCLSLELLLEAGAGNIRYSVPEETDKGSFVGSIAKDLGLETRELAERRIRIVSRGRSQLFSLNPRSGSLVTAGRIDREELCAQSVPCVVSFNILMEDEIKLVPIEVEIIDINDNTPQFQLEELELKMSEITTPGTRIPLPLGQDLDVGINSLQSYQLSANPHFFLDVQQGPDGPQQPEMVLQRPLDREKDAVHYLILTASDGGNPIHSGTLQIHVQVVDVNDNPPAFTQAEYHVRVPENVPLGTRLLKVNASDPDEGANGRVTYSFHNVDHSVVRKFQLDSYTGELSNKEPLDFEEYKVYPMEIQAQDGAGLMARAKVLVTVLDVNDNAPEVGITSVTTTIPENFPPGTIVALISVHDQDTDDNGHTTCSIPGNLPFKLEKLVDNYYRLVTERTLDREHSSRYNITITATDQGTPPLSTQAHISLLVTDINDNPPVFEQDSYSVYIPENNPRGASIFSVKAQDADYNENALVTYALVEDTIQGVPLSSYFSINSDTGVVYALQSFDYEQFRDLQLRVMARDSGNPQLSSNVSLSLFMIDQNDNTPEILYPVLPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNSWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSTTVTFTIAVADSIPDLLADLGSIGTPADPQDSDLTLYLVVAVAVVSCIFLAFVIVLLVLKLRHWHSSRLLQTAANGLTDLPASNFVGVDGVHAFLQTYSHEISLTADSRKSHLIFPQPNYADTLISQESCEKKEFLSAPQCLLEDKEEIFSQQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7261663..7264083))
location: region:7087147-7264083:-1
so has part: feature:7261663-7264083:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741819.1
type: Protein
SIO_000068: ncbiprotein

position:7087147:-1
position: 7087147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7264083:-1
position: 7264083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7261663-7264083:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A2 isoform X9
translation: MATLQKLPQSRMLVLLCALWAALWEARAGQIRYSVPEEIDKGSFVGSIAKDLGLEPRALEERGVRIVSRGKSQLFALNPRSGSLVTAGRIDREELCAQSTPCLVNFNLLMEDKLTIYSVEVEVIDVNDNAPRFGVEEPELKISETTTPGFRIPLKSAHDADVGENTLQKYKLNSNDHFSLDVRTGADGNKYPELVLERALDREEEAVHHLVLVASDGGKPVRSGTCRIRVKVLDVNDNAPVFTQPEYRVSVPENMPVGTRILTVTATDADEGYNAQVTYFQERVPGETTDAFELKSTSGDITITKSLDYEKAKFHEIDIEAQDGPGLLTRTKVIVTVLDVNDNAPEFYMTSATASVPEDAPLGTVIALFNVHDRDSGQNAVVTCSLPEMLPFKLERSVDNYYRLVTARALDREQFSFYNITLSAKDQGSPSLSTDAHLLLQVADINDNPPSFSRGAYSAYIPENNPRGTSIFSVLAYDPDSNDNAHVTYSLAEDTFQGAPLSSYISINSDTGVLYALRSFDYEQFQDLQLWVIAVDSGKPPLSSNVSLSLFLVDQNDNVPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALSDRDALKQSLVVAVQDHGQPPLSATVTLTIAIADNIPEVLADLVSIRTPANSDDSELTLYLVVAVAVVSCVFLAFVIALLALRLRRWHMSRMPQASGDGLGGMPASHFVGVDGVRAFLQTYSHEVSLTADSGKSHIIFPQPNYADTLISQESCEKNDFLSAPQSLLDDKREETPQQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7254960..7257380))
location: region:7087147-7257380:-1
so has part: feature:7254960-7257380:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741818.1
type: Protein
SIO_000068: ncbiprotein

position:7257380:-1
position: 7257380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7254960-7257380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A3 isoform X16
translation: MIRLGRGTAGALLCALLGTLSAAGFRQIRYSVPEELDKGSFVGNISKDLGLEPHELAERGVRIISRGRSQLFSLDPRSGSLVTAGRIDREELCAQSAPCVVSFNILVEDKLKIFEVEVDISDINDNAPSFPTEELEIKIGELTVPGTRFPLKTAFDPDVGMNSLQNYKLNSNDYFSLAVNSVIDDAKYPELVLERVLDREKKAVHQLDLIASDGGDPAHTGKLCIQVIVLDANDNPPVFTKPEYRVSVLENVPVGTRLITVNATDPDEGFNAQVSYILDKMPGKIAQIFHLNSVAGDVSILKSLDYEDAVFYEIKIEAQDGPGLFSRAKILVTVLDVNDNAPEISVTSLTSSVPEEAPAGREIALINVHDRDSGQNGQVSVFVLGNLPFTLEKSIDQYYRLVTARSLDHEEVSQYNISLRATDGGSPPLSTETHITLHVTDINDNPPTFTRASYLAYVPENNARGASIFSVTAQDPDTDKNAQITYSLAEDTLQGVPLSSFVSINSNTGVLYALCSFDYEQFRDLQLHITARDSGNPPLSSNSTLSLFVLDKNDNSPEILYPALPVDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNSWLSYRLIKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTIAVADSIPDILGDLESIHTPANPKNSDLTLYLVVAVAAVSCIFLAFVIVLLALRLRRWHSSRLLQASGNGLAGIPASHFVGVDGVQAFLQTYSQEVSLTAGSRKSHLIFPQPNYADTLISQESCGKSEPLIIPQDLLETQEAPELPEQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7249758..7252172))
location: region:7087147-7252172:-1
so has part: feature:7249758-7252172:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741825.1
type: Protein
SIO_000068: ncbiprotein

position:7252172:-1
position: 7252172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7249758-7252172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A4 isoform X14
translation: MAAPYGSDRRGLIWICIYLGSLCYIRAEQIRYSVPEELEKGSAVGNLAADLGLEPKKLGERGVRIVSRGKTQLFALNPRSGSLVTAGRIDREGLCDRSPKCTANLEILLEDKVRILAVEVEIIDVNDNAPSFGAQQREIKVTENENPGTRFPLPEAFDPDIGVNALQGYQLSSNDHFSLDVQSGPDGIKYPELVLEKALDREEEAFHYLVLTAFDGGDPVRSGTATIQITVVDTNDNAPVFTQPEYHISVKENLPVGTRLLTVKASDPDEGANGEVTYSFRNVRDKISQLFQLNSLTGDITMVGELDYEDSGFYDVDVEAHDGPGLRARSKVLVTVLDVNDNAPEVTVTSLTSSIQETSPPGTVIALFNVHDSDSGENGLVTCSIPDNLPFRLEKTYGNYHRLLIHRTLDREEVSDYNITITATDQGTPPLSTETYISLQVVDINDNPPTFTHASYSAYIPENNPRGAAILSITAQDPDSGENAQVIYSLSEDTIQGAPLSSYISINSNTGVLYALRSFDYEQFQDLKLLVTARDSGNPPLSSNASLSLFVLDQNDNTPEILYPTVPTDGSTGVELTPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTIAVSDNIPDILADLGNINPHIDQEDSDITLYLVVAVAVVSCVFLAFVIVLLIHRLRRWHSTRLLQAAGNGLSSMPTSHFVGVDGVHAFLQTYSHEVSLTADSGKSHLIFPQPNYADTLISQESCAKSDPLLVSQDLLEIKGDSSLQQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7238720..7241137))
location: region:7087147-7241137:-1
so has part: feature:7238720-7241137:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741823.1
type: Protein
SIO_000068: ncbiprotein

position:7241137:-1
position: 7241137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7238720-7241137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B2 isoform X18
translation: MRRGSGSSPAWWLQVLSPFLLPLFHGALPDQIRYSIPEELAKNSMVGNLAKDLGLSVQNLPTRKLRVSAEKNYFTVNPESGDLLVGDRIDREQVCGKQPQCVLEFDIVAEKPLNIFHVAVILEDVNDNAPLFKQSEVDLNIGESTRPGKAFPLDPALDLDAGSNSLQKYSLTDNEYFEVTEKETPDGRKYPELILKRFLDREEHNFHRLILMAVDGGNPPRSGTTQIRIQVTDANDNPPVFTQDVFRVTLREDVPPGFSVLQVTATDQDEGINAEITYSFHNVDEQVERFFNLHKRTGEITTKDNLDFETAKSYTLNVEAKDPGDLASHCSIQVEILDENDCVPEIIVTSVFTPLPEDSPLGTVIALIKTRDRDSGENGDVYCHVLGSEEFVLKSSSKNYYKLVTDRTLDREAIPEYNVTIVATDRGKPPLSSKVILTLHISDVNDNAPVFHQASYLVHVAENNPPGASIAQVSASDPDLGSNGLVSYSIIASDLEPRSLSSFVSVNQDSGVVYAQRAFDHEQLRSFQLTLQARDQGSPALIANVSMRVLVGDRNDNSPRVLYPTLEPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASDPGLFSLGLRTGEVRTARALGDRDSARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLSDDPLPSDPQSELQFYLVVALALISVLFLLAVILAIALHLRHSSRSAVWGCFQSGLSSNPATGVLPNFSEGTLPYSYNMCIASQSAKTEFNFLNVTPEVAPQDLLCDNNSWVPVTLGDTEVPFDSDSISKQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7233737..7236148))
location: region:7087147-7236148:-1
so has part: feature:7233737-7236148:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741828.1
type: Protein
SIO_000068: ncbiprotein

position:7236148:-1
position: 7236148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7233737-7236148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A5 isoform X8
translation: MADPPKRWICNDLLTFFMLLGTLCATGNGQIRYSVREELDKGSFVGNISKDLGLEPRELAERGVRIISRGRSQLFSLNPRGGSLVTAGRIDREELCAQSAPCLISFNILVENKMKIYEVEVEVLDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDGDVGVNSLQGYQLSANPHFSLDVKSGSDGQKHPELVLEQPLDREKESAHDLVLTALDGGNPVHSSTVHISVTVLDANDNAPLFTQSEYRVNVPENIPVGSKLLTLTATDADEGINAKLTFSFRNEEDKISETFQLDSNLGEISTIQSLDYEESSFYLMEVVAQDGGALLASAKVLVTVQDVNDNAPEVILTSLTSSVSEDCLPGTIIALFSVHDADSGENGEVLCSIPKNLPFKLEKSVNNYYHLLTTSALDREETSDYNITVTVVDRGTPPLSTENHISLKVADINDNPPTFSRPSYSTSISENNPRGVSIFSVNAYDADSGDNARITYSLAEYTFQEVPVSSYVSINSDTGVLYALQSFDYEHLRDLQLLVTAKDSGNPPLSSNASLSLFVLDQNDNTPEILYPDIPTDGSTGVELAPRAAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFSIGLHTGEVCTARALLDRDVLRQSLVVAVQDHGQPPLSATVTLTIAVGDSIPDVLTDLGNHNAPAEPQDSDLTLYLVVSVAVVSCVFLGFVTVLLALRLRRWHMSRLLQTSTGRLASMPASHFVGMDGVQAYLQTYSHEISLTTDSKKSHLIFPQPNYADRLISEESCEKSEPLLIPDNIHTSKEEPGAAQQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7229201..7231624))
location: region:7087147-7231624:-1
so has part: feature:7229201-7231624:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741817.1
type: Protein
SIO_000068: ncbiprotein

position:7231624:-1
position: 7231624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7229201-7231624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A6 isoform X17
translation: MAALQRRRPCCELFLLFSLLWGSEAGQIRYSIPEELEKGSFVGSIAKDLGLQPRELAERGVRIVSRGRSQLFSLNQRSGSLVTAGRIDREELCAQSAPCVVSFNILVEDKLNLYPVEVEIVDINDNAPRFLKEEMELKILENAAPSSHFLLMGVYDPDVGVNSIQGFKLSGSSHFSVRVQSQDHGPKYPELVLEHSLDREKEAVHHLVLVAMDGGDPVRTGMARILVTVVDVNDNAPVFTQPIYRVSVPENLPLGTRVLTVNATDQDEGAHAQITYSFVRITEEIAQIFRLDPLTGEISTSKNLDYEDSRFYELDVEARDQSGLQDRAKVLITILDVNDNAPEVVVTSASRAIAENAPPGTVIALFQVYDKDSERNGLVICSISESLPFKLEESLDNYFRLVTNEELDREQVSSYNITVTATDRGTPPLSTKKFISLDVADINDNPPVFSRSSYSVYVPENNPKGVSIFSLNAVDPDSEENAEITYSLAKETLQGTPLSSFLSINSNTGVLYALCSFDYEQFRELTLLVTASDRGKPPLSSNVSLNLFVLDQNDNVPEILYPVLPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARVLLDRDALKQSLVVAVQDHGQPPLSATVTLTVAMASSIPDILADLSSLDLPHKSDDSSLTIYLVVAVATVSCVFLAFVTGLLVLRLWHWRKSSLLKATRKGVSNMSTSHFVGIDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYAHTLISQEGCEKNEPLLIQEDSAFCKEEDSLDQQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7214071..7216485))
location: region:7087147-7216485:-1
so has part: feature:7214071-7216485:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741827.1
type: Protein
SIO_000068: ncbiprotein

position:7216485:-1
position: 7216485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7214071-7216485:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A7 isoform X1
translation: MVVREFRQNHRVYNTKKGQTETGKPSIKPHQTQAEWLDSRLPFRTPGYWRIQLGSEAHSETSQGVSKICRTAMAPGQRGWGSDYRGFVLLSILLGTRWEAWAGQILYSVSEETDKGSFVGNITKDLGLQPRDLAERGVRIITKGKTQLFSLNSRSGSLVTADRIDREELCAQSPRCLVSFNILIEDKMNLYPIEVEVIDVNDNAPRFLTEEINVKIMENAAPGMRFPLSEATDSDVGKNSLQRYQLSPNHHFSLVVQNGDDGTKYPELVLEKALDREEEGLHHLVLTAYDGGDPLRSGTASIRVTVVDVNDHTPVFSLPRYQATVPENVPVGTRLLTVNAIDLDEGVNGEVTYAFRKITPELLQMFHLSSLTGELSTLKGLDYEESSFYELEVQAQDGAGSLTKAKVLITVLDVNDNAPEVTVTSVSSPIPEDTPPGTVIALFYLQDKDSGKNGEVTCSLPENLPFKLERSIDNYYRLVTAQNLDREKMSMYNITLKATDGGIPPLSTETHMSIHVSDTNDNPPTFSDSSYSIYVPENNPRGASIFSVTAQDPDSDKNAQITYALAEDSIQGVPVSSYISINSDTGVLYALGSFDYEQFRDLQLQVTARDSGDPPLSSNVSLNLFVLDRNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGPNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVVAVQDHGQPPLSATVTLTVAVANSIPDVLADLGSIRTPSEPDDSDITLYLVVAVATVSCVFLVFVTVLLALRLWRWHKSHVLQASGGGLEDVPASHFVGLDGVQAFLQTYSHEVSLTADSRKSHIIFPQPNYVDTLISQDSCEKSDSLLTSIDFQECKGETPSTQQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7206384..7209029))
location: region:7087147-7209029:-1
so has part: feature:7206384-7209029:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741809.1
type: Protein
SIO_000068: ncbiprotein

position:7209029:-1
position: 7209029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7206384-7209029:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A8 isoform X7
translation: MAASKNQHRQGRLVLFCTLMGTLCKIGVGQIRYSVPEETDKGTVVGNISKDLGLEPRELAERGVRIVSRGRSQLFSLNPRGGSLVTASRIDREELCAQSIPCLVNINILVEEKGKLFGVEIEITDINDNNPKFHVGDLEVKINEIAAPGARYPLPKAVDPDVGINSLQSYQLSPNRHFSLDIQRGDDGTINPELVLEHTLDREEEPSHHLVLTASDGGDPRRSSTALIQVIVLDTNDNAPVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGANGKVTYKFQKINDKQSLLFHLHENTGEMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVVIMVEDVNDNRPEVTITSLFNPVLENSLPGTVIAFLNVHDRDSGKNGQVVCYTHDNLPFKLEKSIDNYYRLVTWKYLDREKVSIYNITVIASDLGAPPLSTETYIALIVADTNDNPPRFPHASYTAYIPENNLRGASIFSLTAHDPDSQENAQVTYSVSEDTIQGVPLSSYISINSDTGVLYALQSFDFEKIQDLQLLVVATDSGSPPLSSNVSLSLFVLDQNDNAPEILYPSFPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVMAVQDHGQPPLSATVTLTVAVANSIPEVLADLSSIRTPGVPEDSDITLHLVVAVAVVSCVFLVFVIVLLALRLQRWQKSRQLQGSRGGLAPAPPSHFVGIDGVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADMLINQEGCEKNDSLLTSIDFHESKDEDACALQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7195586..7198009))
location: region:7087147-7198009:-1
so has part: feature:7195586-7198009:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741815.1
type: Protein
SIO_000068: ncbiprotein

position:7198009:-1
position: 7198009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7195586-7198009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A9 isoform X11
translation: MAAPARRPHCTRLVLLCALLGMLWEARARQIHYSVPEETEKGYTVGNISKDLGLEPRELAERGVRIISKGKTQFFSLSPRSGCLVTAGRIDREELCAQSAPCLLSFKVLVEDRVKLYGVEVEVIDINDNAPKFEAENLVVKISEIAAPGARYPLPEAVDPDVGINSLQSYQLSPNRHFSLHLQTGDDGTINPELVLERTLDREEEPSHHLVLTASDGGDPRRSSTALIQVIVLDTNDNAPVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGANGKVTYKFRKINEKQSLLFHLHENTGEITVAKTLDYEECSLYEMEIQAEDGGGLKGRTKVVVTVEDVNDNRPEVTITSLFSPVREDAPPGTVIVLFNAHDQDSGKNGQVVCSIQENPSFKLENSVDDYYRLLTAQILDREKASEYNITVTATDRGTPSMSTEVHITLYVADINDNPPAFSQTSYSVYLPENNPRGTSIFSVSAHDPDENENAKVTYSLVENTIQGAPLSSYISINSDTGVLYALQSFDYEQFQNLQMQVKASDSGHPPLSSNVSLSVFLLDQNDNAPKILYPSLPTDGSTGVELAPRSAEAGYLVTKVVAVDEDSGQNAWLSYRLLKASEPGLFTVGLRSGEVRTARALLERDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPDILADLGSISTPADPDSDITLYLVVAVAVVSCVFLLFVLVLLALRLRRWHASSLLQDAIGGSTGVPTSHIVGVHGVQTFLQTYSQEFSLTPDSGKSHLIFPQPNYADTLISQESCGKSEPLCSSVESKFPIDDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7184906..7187326))
location: region:7087147-7187326:-1
so has part: feature:7184906-7187326:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741820.1
type: Protein
SIO_000068: ncbiprotein

position:7187326:-1
position: 7187326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7184906-7187326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B6 isoform X13
translation: MGGSSARRQRPGRPQVLFTLLLPLFCPALGQPVRYSIPEELDRGSVVGNLAKDLGLSVLEVSARKLRVSAEKMHFSVDSESGDLLVKDRIDREQICKGRRRCELQLEAVLENPLNIFHVVVEIEDVNDHAPQFEKKETRLEILESVSVGTRIPLEPATDPDINLNSIKDYQISPNPYFSLIVKVNADGGKTPELSLEKLLDREEQRSHRLILTALDGGDPPRSATIQIEISVKDNNDNPPVFSKEEYRTSVSENLSPGSSVLQVTATDEDEGVNAEIRYYFWSTAQSTRHVFSLDEKTGVIKNNQSLDFEDIERYTMEVEAKDGGGLSTRCKIIIEVLDENDNSPEITITSLSDHILENSPPGVVVALFKTRDRDFGGNGEVTCDIGKDLPFKIQASSSNYYKLVTDGAIDREQNPQYNVTITATDKGKPALSSSTTIALHITDVNDNAPAFQKSSYVVHVAENNPPGASIAQVSASDPDLGSNGHVSYSIIASDLEPKSLWSYVTVNAQSGVVFAQRAFDHEQLRSFQLTLQARDQGSPALSANVSMRVLVGDRNDNAPRVLYPALEPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASDPGLFSLGLRTGEVRTARALGEKDAARQRLLVGVRDGGQPPLSATATLLLVFADSLQEALPDLSDRSLPPDPQAELQFYLVVALALISVLFLLAVILAIALRLRHSSSPSVWSCFQSGLCSKTRPGVSLNYSEGTLPYSYNLCVGQTGNAELNFLKCSAPLPSAQEIVCGSSPGALIPIHFGDDPTAHPETLTPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7179841..7182258))
location: region:7087147-7182258:-1
so has part: feature:7179841-7182258:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741822.1
type: Protein
SIO_000068: ncbiprotein

position:7182258:-1
position: 7182258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7179841-7182258:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A10 isoform X12
translation: MAAQRNLSERTKLVLLFLWIPWESAARQIRYSVPEELEKGSFVGNISKDLGLEPRELAERGVRIISRGRSQLFSLNPRGGSLVTAGRIDREELCAQSAPCVVSFNILVEDRVKLFGIEIEVTDVNDNAPKFQAETLDVKINENVAPGMRFPLPEATDPDVDVNSLQSYQLSPNKHFSLVVQSGAKGIKYPELVLERALDREEEAIHHLVLVASDGGNPPRSGTVLITVTVFDANDNAPIFTSTEYRVNVPENLPVGTQLLKVTATDKDEGANGEVTYAFRKSLDAQLSKFQLDQNTGEIKLSENLDYEERRFYEIEIQAEDGGAYLATAKALITVEDVNDNSPEVIITSLFSPVTEDSPVGTVIALLNVHDLDSGQNGEVTCSISGNLPFKLEKSIDSYYRLVTQRALDREQVPSYNITVTATDGGNPPLSTQAHFTLQVADINDNPPTFSHTSYLTYIPENNPRGASIFSVTALDPDSKENAQIVYSLAEDTIEGAPLSSYISINSDTGILYALWSFDYEQFRELQVQVTASDSGKPPLHSNVSLTLFVLDQNDNSPEILYPSMPTDGSTGVELAPRSAELGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFTVGLHTGEVRTARALMERDALKQNLVVAVQDHGQPPLSATVTLTVAVADSIPDVLADLSNLEPPKDSEASSLTLYLVVAVAAVSCIFLAFVIVLLALKLRRWHKSHMLQSSRDELAGVPASHYVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKDPLSLLDDSKCPVEDAPLVPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7175072..7177489))
location: region:7087147-7177489:-1
so has part: feature:7175072-7177489:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741821.1
type: Protein
SIO_000068: ncbiprotein

position:7177489:-1
position: 7177489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7175072-7177489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A11 isoform X5
translation: MANQPQRLDRRALVPLCIFLGTLLTFGTGQIRYSVPEETDKGFFVGNISKDLGLEPWEVADRGVRIVSRGKSQLFSLNPRGGSLVTAGRIDREELCDTVPSCLLNLEILVEETLKIYGVEVEVMDINDNAPSFREEEVEIKVSEHTSPGSRFPLPKARDPDTGMYSLQSYQLSPSSYFSLQVRGGIDGDKNPELVLEESLDREKEASHHLLLTALDGGDPIRTGMVPIRVVVLDVNDHIPKFTQSVYRASVPENLSSGTRVLVVNATDPDEGINGEVMYTFRKMKSKASEIFQLNSQTGEVLVGKPLDFEKYRFYEMEIQGQDGGGLLSTTMLLITVEDVNDNVPEITVTSSINSVPENSPSGTVIALLNVQDQDSGENGQVSCFIPSGLPFKLEKTYGNYYKLVTDSELDREQVASYNITLIAKDQGSPPLSTATHLLLKVADANDNPPVFSHSSYSAYIPENNPRGSSIFSVTAIDRDSKENAQVTYSLAEYSIQGSPLSSYVSINSDTGVLYALQSFDYEQFQTLQLGVTASDSGNPPLSSNISLTLFVLDQNDNTPEILYPSLPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARAMMDKDALKQSLVVTVQDHGQPPLSATVRLTVAVADSIPEVLEDLVSLESPANPDESSLTLYLVVAITAVSCIFLIFVMVLLALRLRRWHSSRLLQAASGLAGVPPSHFVGVDGMHAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCGKSEPLLIPEDSATVLGKCEPTDIQQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7166673..7169099))
location: region:7087147-7169099:-1
so has part: feature:7166673-7169099:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741813.1
type: Protein
SIO_000068: ncbiprotein

position:7169099:-1
position: 7169099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7166673-7169099:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B1 isoform X15
translation: MERSVKLGSRTLWRQVLFPFLLPLFCTGLAEQVRYSIPEEMAMGSVVGNLAEDLGLPVQDLLIRNLRVISEKPYLTVNPENGNLVVSDRIDRELLCFQSPLCVLPLEIVAENPLNVFHVSVVIEDINDNPPRFLQNRIVLQINELAIPGTRFGLESAIDADVGPNSLQSYQLNLNEHFSLVVKDKTEGKDAPELVLEKPLDREKQSSQLLVLTAVDGGEPVLTGTAQIQIEVTDANDNPPVFSQSTYKVSLRENMPSGTSVLTVMATDRDEGVNAEITYSFKSLGEDIRSKFILDHQSGEIKSKGPIDFEAKRTYTMNIEAKDGGGMATECKVVIEILDENDNAPEVVFTSVSNSITEDAEPGTVVALFKTYDKDAEENGRVSCFVKETVPFRIESSASNYYKLVTDGMLDREQTPEYNVTIVATDKGKPPLSSSTSVTLHVGDVNDNAPVFHQASYLIQVAENNPPGASIAQVSASDPDLGSNGLISYSIIASDLEPKSLWSYVSVNQDSGVVFAQRAFDHEQLRSFQLTLQARDQGSPALSSNVSMRVLVGDRNDNAPRVLYPTLEPDGSALFDTVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASDPGLFSLGLRTGEVRTARALGDRDSARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPELRDEPLPSDPQNELQFYLVVALALVSVLFLFVVILAIALRLRQSQGPAVSGCFQSGLCCKTRPGVSLNYSEGTLPYSYNLYVASNCQKTSQFLTLTPEMVPPRDLCMEASVPVSVTEENNKIVSDSIASNHQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7161650..7164064))
location: region:7087147-7164064:-1
so has part: feature:7161650-7164064:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741824.1
type: Protein
SIO_000068: ncbiprotein

position:7164064:-1
position: 7164064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7161650-7164064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A12 isoform X6
translation: MIPMQRPEDCKGLVFLGVLFGMLWEAGSTQIRYSVPEELEKGSRVGNISKDLGLEPRELAERGVRIVSRGRAQLFALNPRSGSLVTAGRIDREELCMGSIKCQLNLEILMEDIGKIYGVEIEVRDINDNAPYFRESELEIKMSENAAAGMRFPLPHAWDPDIGKNSLQSYQLSPNAHFSLEVQKGADGNKYPELVLESSLDREEKAAHLLVLTASDAGNPVRSGTARILVTVLDVNDNAPVFARSEYRVSVRENVAVGTQLLLVNATDRDEGSNAEVIYSFRYVDDKAAKVFKLDSNLGTISTIGELNHEESGFYEMEVQATDNAGFSARAKVLVTVLDVNDNAPEVAITSLNSPVPENSPRGTLIALLNVNDQDSGENGQVICSIQENLPFKLEKSYGNYYSLVTDAVLDREQVPSYNITVTATDRGSPPLTTETHLSLNVADANDNPPIFLQASYWAYIQENNPRGASIASVTAHDPDSDKNAQVTYSLAEDTHQGVPLSSYVSINSDTGVLYALHSFDYEQFPDLQLQVIARDSGDPPLSSNVSLSLIVLDQNDNTPEILYPTLPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVSTARALMDRDALKQNLVVSVQDHGQPPLSATVTLTVAIADSIPDVLADLDNLESPTTSETSGLTLYLVVAVAAVSMVFLVFVLVLLALRLRRWHSLRLLRAAGPGLADVAASHFVGVDGVQAFLQTYSHEVSLTAGSRKSHLIFPQPNYADTLISQESCEKTEPLLPSSDSVFSKDNHALNQQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7157304..7159727))
location: region:7087147-7159727:-1
so has part: feature:7157304-7159727:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741814.1
type: Protein
SIO_000068: ncbiprotein

position:7159727:-1
position: 7159727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7157304-7159727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-C3 isoform X20
translation: MVAEARSSGLQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7121212..7121241))
location: region:7087147-7121241:-1
so has part: feature:7121212-7121241:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741830.1
type: Protein
SIO_000068: ncbiprotein

position:7121241:-1
position: 7121241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7121212-7121241:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-C3 isoform X4
translation: MVAEARSSGLVSPGRTVGVLLLLAALSEASTIIHYEILEEREKGFPVGNVVTDLGLDLGSLSARRLRVVSGASRRFFEVNWETGEMFVNDRLDREELCGTLPSCTVTLELVVENPLELFSAEVVVQDINDNNPSFPTGEMKLEISEAMAPGTRFPLESAHDPDVGSNSLQTYELSHNEYFALRVQTREDGTKYAELVLERALDWEREPSVQLVLTALDGGTPARSATLPIRITVLDANDNAPAFNQSLYRARVREDAPPGTRVAQVRATDLDEGLNGEIVYSFGSHNRAGVRELFALDLVTGVLTIKGRLDFEDTKLHEIYIQAKDKGANPEGAHCKVLVEVVDVNDNAPEITVTSVYSPVPEDAPLGTVIALLSVTDLDAGENGQVTCEVPPGLPFSLTSSLKNYFTLKTSAALDRETVPEYNLSITARDSGTPSLSALTTVRVQVSDINDNPPQSSQSSYDVYVEENNLPGVPILNLSVWDPDAPPNARLSFFLLEPGAETGLVGRYFTINRDNGILTTLVPLDYEDQREFQLTAHINDGGTPVLATNISVNIFVTDRNDNAPQVLYPRPGQSSVEMLPRGTAAGHVVSRVVGWDADAGHNAWLSYSLLGAPNQSLFAVGLHTGQISTARPIQDTDSPRQILTVLISDNGEPLLSTTATLTVSVTEESPEARAEFPSGSAPREQNKNLTFYLLLSLILVSVGFAVTVLGVIIFKVYKWKRSRDLYRAPVSSLYRTPVSSLHADAVRGGLMPPHLYHQVYLTTDSRRSDPLLKKPGAASPLASRQNTLRSCDPVFYRQVLGAESAPPGQQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7118812..7121241))
location: region:7087147-7121241:-1
so has part: feature:7118812-7121241:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7118812-7121241:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-C4 isoform X3
translation: MPSTVRSWVEIWWGATLLFLFCHLGYVYGQIRYPVPEESQEGTFVGNVAQDFLLDTESLSARRLQVAGEVNQRHFRVDLDSGALLIKNPIDREALCGLSASCIVPLEFVTEGPLEMYRAEVEIVDVNDHAPRFPRQQLDLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSSNEHFALDVKKRSDGSLVPELLLEKPLDREKQSDYRLVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDPDLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDVRARDGGSPAMEQHCSLRVDLLDVNDNAPHITVTSELGTLPESAEPGTVVALISVQDPDSGSNGDVSLRIPDHLPFALKSAFRNQFSLVTAGPLDREARSSYDIMVTASDAGNPPLSTHRTIFLNISDVNDNPPSFFQRSHEVFVPENNRPGDLLCSLAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGSPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGSLCPQALPPSVGAGHLVTKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPIPADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTLYLAVSLVAICFVSFGSFVALLSKCLRGAACGVTCFPAGTCACLTRSRRREGLPPSNGILRIQLGSEDPIKFVDVGGHSHGCTPLASAPTRSDSFMMVKSPSAPMAGEPVRPSCPPSDLLYGLEQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7107628..7110069))
location: region:7087147-7110069:-1
so has part: feature:7107628-7110069:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741811.1
type: Protein
SIO_000068: ncbiprotein

position:7110069:-1
position: 7110069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7107628-7110069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A4 isoform X22
translation: MGPMASPQQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7105969..7105992))
location: region:7087147-7105992:-1
so has part: feature:7105969-7105992:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741832.1
type: Protein
SIO_000068: ncbiprotein

position:7105992:-1
position: 7105992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7105969-7105992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-C5 isoform X2
translation: MGPMASPQVTGKWQVLYMLSLCCCGWVSGQLRYSVVEESEPGTLVGNVAQDLGLKVADLLSRRLRLGSEENGRYFSLSLMSGALAVNLKIDRESLCGASTSCLLPVQVVTEHPLELTRVEVEILDLNDNSPSFATPEREMRISESAAPGARFPLDSAQDPDVGTNTVSFYTLSPSSHFSLNVKTLKDGKLFPELVLEQQLDREAQARHQLVLTAVDGGTPARSGTSLISVIVLDINDNAPTFQSSVLRVGLPENTPPGTLLLRLNATDPDEGTNGQLDYSFGDHTSEAVKNLFGLDPSTGAIHVLGPVDFEESNFYEIHARARDQGQPAMEGHCVIQVDVGDANDNPPEVLLASLVNPVLESTPVGTVVGLFNVRDRDSGRNGEVILETTPNLPFQIKPSENHYSLLTSQPLDREVTSHYTIDLLASDAGSPPLHTHLTIRLNISDVNDNAPHFTQQLYTAYIPENRPPGSLLCTVAASDPDEGDNARLTYSIVGSQIQGAPASSFVYVNPEDGRVFAQRTFDYELLQMLQIVVGVRDSGSPRLYANTSLHVFVLDQNDNAPTVLHPRPGREFSAPQRLPRSAPPGSLVTKVTAVDADAGHNAWLSYSLLPQSTAPGLFLVSAHTGEVRTARALLEDDSDTQQVVVLVRDNGDPSLSSTATVLLVLEDEDAEEMPKSSDFLSHPPERSDLTLYLIVALAAVSLLSLVTFTFMSAKCLRRHEDGDRGGGQCCRGQDSPSREFYKQSSPNLQVSSDGTLKYMEVTLRPTDSQSHCYRTCFSPASDGSDFTFLRPLSVQQPSALALEPETLRSRSSTLRERSQQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7103533..7105992))
location: region:7087147-7105992:-1
so has part: feature:7103533-7105992:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7103533-7105992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A4 isoform X24
translation: MQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7105955..7105957))
location: region:7087147-7105957:-1
so has part: feature:7105955-7105957:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741834.1
type: Protein
SIO_000068: ncbiprotein

position:7105957:-1
position: 7105957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7105955-7105957:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-C5 isoform X19
translation: MLSLCCCGWVSGQLRYSVVEESEPGTLVGNVAQDLGLKVADLLSRRLRLGSEENGRYFSLSLMSGALAVNLKIDRESLCGASTSCLLPVQVVTEHPLELTRVEVEILDLNDNSPSFATPEREMRISESAAPGARFPLDSAQDPDVGTNTVSFYTLSPSSHFSLNVKTLKDGKLFPELVLEQQLDREAQARHQLVLTAVDGGTPARSGTSLISVIVLDINDNAPTFQSSVLRVGLPENTPPGTLLLRLNATDPDEGTNGQLDYSFGDHTSEAVKNLFGLDPSTGAIHVLGPVDFEESNFYEIHARARDQGQPAMEGHCVIQVDVGDANDNPPEVLLASLVNPVLESTPVGTVVGLFNVRDRDSGRNGEVILETTPNLPFQIKPSENHYSLLTSQPLDREVTSHYTIDLLASDAGSPPLHTHLTIRLNISDVNDNAPHFTQQLYTAYIPENRPPGSLLCTVAASDPDEGDNARLTYSIVGSQIQGAPASSFVYVNPEDGRVFAQRTFDYELLQMLQIVVGVRDSGSPRLYANTSLHVFVLDQNDNAPTVLHPRPGREFSAPQRLPRSAPPGSLVTKVTAVDADAGHNAWLSYSLLPQSTAPGLFLVSAHTGEQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7104112..7105941))
location: region:7087147-7105941:-1
so has part: feature:7104112-7105941:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741829.1
type: Protein
SIO_000068: ncbiprotein

position:7105941:-1
position: 7105941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7104112-7105941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B5 isoform X23
translation: MVLAWLQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7100922..7100939))
location: region:7087147-7100939:-1
so has part: feature:7100922-7100939:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741833.1
type: Protein
SIO_000068: ncbiprotein

position:7100939:-1
position: 7100939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7100922-7100939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A4 isoform X21
translation: MKYFVSLWQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7087147..7087373,7092080..7092168,7100477..7100535,7100693..7100716))
location: region:7087147-7100716:-1
so has part: feature:7100693-7100716:-1:exon
so has part: feature:7100477-7100535:-1:exon
so has part: feature:7092080-7092168:-1:exon
so has part: feature:7087147-7087373:-1:exon

XP_032741831.1
type: Protein
SIO_000068: ncbiprotein

position:7100716:-1
position: 7100716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7100693-7100716:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100477-7100535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7092080-7092168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7087147-7087373:-1:exon

LOC116884730
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7170224..7173948)
location: region:7170224-7173948:-1
so has part: feature:7170224-7173948:-1:exon
subclass of: SO_0000010

116884730
type: Gene
SIO_000068: ncbigene

position:7170224:-1
position: 7170224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7173948:-1
position: 7173948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7170224-7173948:-1:exon

LOC116884730
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884730
product: protocadherin gamma-B7-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885945.1
SIO_010081: LOC116884730
subclass of: SO_0000673
so part of: LOC116884730
location: complement(7170224..7173948)
location: region:7170224-7173948:-1
so has part: feature:7170224-7173948:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7170224-7173948:-1:exon

LOC116884730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884730
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin gamma-B7-like
translation: MGGSSAQRQRPGRPQVLFTLLLPLFCPALGQPVRYSVPEELDRGSVVGNLAKDLGLSVLEVSARKLRVSAEKMHFSVDSESGDLLVKDRIDREQICKGRRRCELQLESVLENPLNIFHVLVEIEDVNDHAPQFPKDEINLEISESVSPGARTILESANDPDIDVNSLSKYQLSPNEYFSLLVKDNPEGGKYPELELQKMLDRETESTHNLVLTAVDGGDPPQVAQLSSESSGGANDNPQCSAEKCTESAFEDLPPGATVLRLKTTDQDRGINAEFTYSFLGVANKAQHEFSLDPVTGDIITLQSLDFEEVERYTIGVEAKDRGSLSSQCKVIIEVLDENDNRPEIIITSLSDQILEDSPSGTVVALFKVRDRDSGENAEVTCSLSGNNPFKIHSSSNNYYKLVTDSILDREQTPGYNVTITATDRGKPPLSSSTTITLNVADVNDNAPVFQQQAYLINLPENNQPGTSITQVRAWDPDVGSNGLVSYSIIASDLEPKALSSFVSVNKDSGVVYAQRAFDHEQLRSFQLTLQARDQGSPALSANVSMRVLVGDRNDNAPRVLYPALEPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASDPGLFSLGLRTGEVRTARALGDKDAARQRLLVAVRDGGQPPLSATATLLLVFADSLQEALPDLVDHPIPSDPQSELQFYLVVALALISVLFLLAIILAIALRLRQSSSPSTTGCFGSVLGSKSRPVLPPNYSEGTLPYAYNVCVPGDQLKPEFNFLTSVGDCPAAQDLLNKDSSSALLASMLTPSVEADKQTFNQVFNIVLFIFRYANVYI
SIO_010081: LOC116884730
subclass of: SO_0000673
so part of: LOC116884730
location: complement(7170557..7173024)
location: region:7170557-7173024:-1
so has part: feature:7170557-7173024:-1:exon

XP_032741836.1
type: Protein
SIO_000068: ncbiprotein

position:7170557:-1
position: 7170557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7173024:-1
position: 7173024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7170557-7173024:-1:exon

LOC116884875
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7190613..7195223)
location: region:7190613-7195223:-1
so has part: feature:7190613-7195223:-1:exon
subclass of: SO_0000010

116884875
type: Gene
SIO_000068: ncbigene

position:7190613:-1
position: 7190613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7195223:-1
position: 7195223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7190613-7195223:-1:exon

LOC116884875
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884875
product: protocadherin gamma-B5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 37 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886121.1
SIO_010081: LOC116884875
subclass of: SO_0000673
so part of: LOC116884875
location: complement(7190613..7195223)
location: region:7190613-7195223:-1
so has part: feature:7190613-7195223:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7190613-7195223:-1:exon

LOC116884875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B5-like
translation: MREGAAERRRGHRRPMLLPFLLPLFCPALSEQIRYKIPEEMPIGSVVGNLAKDLGFGVQELPTRKLRISSEKPYFTVSSESGELLVSSRLDREQICGKKPVCSLEFEAVAENPLNFYHMSVELEDINDHTPKFAHTSFELQISESAQPGTRFILEVAEDADVALNSLQNYKLSLSPSFSLVNKEKQDGRKYPELVLEKILDREQQSYYRLVLTALDGGDPPLSGTTELRIQVTDANDNPPVFDQEVYRVRLPENVPPGTTVARVTATDKDEGVNSEITYSFHRAEQVFGLNSKSGEITTQRTLDFEETKEYSIVVEARDGGGLVAQCTVEINIQDENDNKPEITVHSLLETIPENAPPGTLISLIKIHDRDSGENGEVNCRLDSEAPFKIISSSKNSYKLMTDRALDRELTPEYNVTIMATDGGKPPLSSSTKVTLHVGDVNDNAPLFHQASYLVYIAENNPPGASIAHVSASDPDLGSNGHVSYSIIASDLEPKSLWSYVTVNAQSGVVFAQRAFDHEQLRSFQLTLQARDQGSPALSANVSMRVLVGDRNDNAPRVLYPALEPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASDPGLFSLGLRTGEVRTERALGEKDAARQRLLVGVRDGGQPPLSATATLLLVFADSLQEALPDLSDRSLPPDPQAELQFYLVVALALISVLFLLAVILAIALRLRHSSSPSVWSCFQPGFCSESKPVVFPNYSEGTLPYSYNLYGAHAGKTECNFLKCSEPLSSGQGLLCPESSGALFPLCDSSEPTSHPEPLTPVSSV
SIO_010081: LOC116884875
subclass of: SO_0000673
so part of: LOC116884875
location: complement(7190613..7193033)
location: region:7190613-7193033:-1
so has part: feature:7190613-7193033:-1:exon

XP_032742012.1
type: Protein
SIO_000068: ncbiprotein

position:7193033:-1
position: 7193033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7190613-7193033:-1:exon

LOC116885070
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116885070
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7217605..7217730)
location: region:7217605-7217730:-1
so has part: feature:7217605-7217730:-1:exon
subclass of: SO_0000578

116885070
type: Gene
SIO_000068: ncbigene

position:7217605:-1
position: 7217605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7217730:-1
position: 7217730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7217605-7217730:-1:exon

LOC116885070
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10117
nc RNA class: snoRNA
gene: LOC116885070
product: small nucleolar RNA SNORA40
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00561
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004385944.1
SIO_010081: LOC116885070
subclass of: SO_0000673
so part of: LOC116885070
location: complement(7217605..7217730)
location: region:7217605-7217730:-1
so has part: feature:7217605-7217730:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7217605-7217730:-1:exon

LOC116884733
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7243454..7248442)
location: region:7243454-7248442:-1
so has part: feature:7243454-7248442:-1:exon
subclass of: SO_0000010

116884733
type: Gene
SIO_000068: ncbigene

position:7243454:-1
position: 7243454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7248442:-1
position: 7248442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7243454-7248442:-1:exon

LOC116884733
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884733
product: protocadherin gamma-B1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 29 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885947.1
SIO_010081: LOC116884733
subclass of: SO_0000673
so part of: LOC116884733
location: complement(7243454..7248442)
location: region:7243454-7248442:-1
so has part: feature:7243454-7248442:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7243454-7248442:-1:exon

LOC116884733
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B1-like
translation: MANQVMLHFLVPLFCGAFSQPIHYSIPEELAKGSLVGNLAKDLGLSIQGLPGRKLRVSAEDYFSVSAESGDLLVSGRIDREKICERKSECALEFESVIENPMNIFHITVAIQDINDNAPHFFGKSIELEICESALAGAKFPLDSARDADVGSNSLKMYTISPNPHFSLSTKESPDGSKYPELLLEKPLDREHQSSHHLILTAMDGGDPPLSSTTQIWIKVTDANDNAPVFSQDTYKVSLRENVPPGTLVLQVTATDEDESIHGEITYAFLNVPASTNHIFSLNPNTGAITTNGTLDFEEKSRYTLGVEAKDGGVHAAHCNVQIEILDENDNAPEVTFMSFSNQVPEDSVLGTVIALIKVRDKDSGQNGLVACHIQEELPFKLQPTSKNYYKLVIDKALNREQTPEYNVTITATDSGKPSLSSKTCVTVHITDINDNAPVFHQASYLIHVAENNPPGASIAQVSASDPDLGSNGLISYSIIASDLEPRALSSFVSVNQDSGVVYAQRAFDHEQLRSFQLTLQARDQGSPALTANVSMRVLVGDRNDNAPRVLYPTLEPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASDPGLFSLGLRTGEVRTARALGDRDSARQRLLVVVRDGGQPPLSATATLHLIFADSLQEVLPDLSDDPLPSDPQSELQFYLVVALALISVLFLLAVILAIALRLRHSSRSVSWGCFQSGLSSKSQPVVPPNYSEGTLPYSYNLCVASHSTTMAGFNFHHVAPELAPPQDLLCDDPSVVVCGNNEEPQILDDSSFQVSFYRAT
SIO_010081: LOC116884733
subclass of: SO_0000673
so part of: LOC116884733
location: complement(7243817..7246222)
location: region:7243817-7246222:-1
so has part: feature:7243817-7246222:-1:exon

XP_032741838.1
type: Protein
SIO_000068: ncbiprotein

position:7243817:-1
position: 7243817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7246222:-1
position: 7246222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7243817-7246222:-1:exon

LOC116884728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884728
product: protocadherin gamma-C4, transcript variant X26
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 60 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885944.1
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7260155..7260359,7261676..7264458))
location: region:7260155-7264458:-1
so has part: feature:7261676-7264458:-1:exon
so has part: feature:7260155-7260359:-1:exon

position:7260155:-1
position: 7260155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7261676-7264458:-1:exon

position:7261676:-1
position: 7261676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7260155-7260359:-1:exon

position:7260359:-1
position: 7260359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116884728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A1 isoform X25
translation: MAIPEKLTGWSLLMLLCLSLELLLEAGAGNIRYSVPEETDKGSFVGSIAKDLGLETRELAERRIRIVSRGRSQLFSLNPRSGSLVTAGRIDREELCAQSVPCVVSFNILMEDEIKLVPIEVEIIDINDNTPQFQLEELELKMSEITTPGTRIPLPLGQDLDVGINSLQSYQLSANPHFFLDVQQGPDGPQQPEMVLQRPLDREKDAVHYLILTASDGGNPIHSGTLQIHVQVVDVNDNPPAFTQAEYHVRVPENVPLGTRLLKVNASDPDEGANGRVTYSFHNVDHSVVRKFQLDSYTGELSNKEPLDFEEYKVYPMEIQAQDGAGLMARAKVLVTVLDVNDNAPEVGITSVTTTIPENFPPGTIVALISVHDQDTDDNGHTTCSIPGNLPFKLEKLVDNYYRLVTERTLDREHSSRYNITITATDQGTPPLSTQAHISLLVTDINDNPPVFEQDSYSVYIPENNPRGASIFSVKAQDADYNENALVTYALVEDTIQGVPLSSYFSINSDTGVVYALQSFDYEQFRDLQLRVMARDSGNPQLSSNVSLSLFMIDQNDNTPEILYPVLPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNSWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSTTVTFTIAVADSIPDLLADLGSIGTPADPQDSDLTLYLVVAVAVVSCIFLAFVIVLLVLKLRHWHSSRLLQTAANGLTDLPASNFVGVDGVHAFLQTYSHEISLTADSRKSHLIFPQPNYADTLISQESCEKKEFLSAPQCLLEDKEDNKLIQVCIFLVLIIKHKLMNWLVLKIRILLIG
SIO_010081: LOC116884728
subclass of: SO_0000673
so part of: LOC116884728
location: complement(join(7260260..7260359,7261676..7264083))
location: region:7260260-7264083:-1
so has part: feature:7261676-7264083:-1:exon
so has part: feature:7260260-7260359:-1:exon

XP_032741835.1
type: Protein
SIO_000068: ncbiprotein

position:7260260:-1
position: 7260260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7261676-7264083:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7260260-7260359:-1:exon

LOC116884732
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884732
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7351632..7356310)
location: region:7351632-7356310:-1
so has part: feature:7351632-7356310:-1:exon
subclass of: SO_0000010

116884732
type: Gene
SIO_000068: ncbigene

position:7351632:-1
position: 7351632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7356310:-1
position: 7356310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7351632-7356310:-1:exon

LOC116884732
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884732
product: protocadherin alpha-13-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885946.1
SIO_010081: LOC116884732
subclass of: SO_0000673
so part of: LOC116884732
location: complement(7351632..7356310)
location: region:7351632-7356310:-1
so has part: feature:7351632-7356310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7351632-7356310:-1:exon

LOC116884732
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884732
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-13-like
translation: MLLFSQSGPGSRCLLLSFLLFTAWEAGSGQLHYSIPEEAKHGTFVGRIAQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVEVEVKDINDNPPVFPETNKNIVIAESRPPETRFPLDGASDADIGINSALTYRLDPSDYFALATQNNRERPSSLSLVLKKSLDREEIQEHSLLLTASDGGKPELTGTVQLLITILDVNDNAPEFDRFVYRVRVLEDVFNGTLVINLNATDPDQGTNGDIIYSFRRPVSPAVVHAFNIDPNSGEVRTKGLLDFEEIKLYEIPVEAVDKGNIPMTGHCTLLVEVLDVNDNAPEVTITSLSLPVREDAQPSTVIALVSVSDRDSGDNGQVTCSLTPHLPFKLVSTFKNYYSLVLDSALDRETTADYKVVVTARDGGSPSLWATASVSVEVADVNDNVPVFAQPEYTVFVKENNPPGAHIFTVSAVDTDAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQFQVSARDAGVPALGSNVTLQVFVLDENDNVPTLLPHRAVGAGGAVSELVPRSVGSGHVVAKVRAVDADSGYNAWLSYELQLAAGAMSSPFRVGLYTGEISTTRALDEADAPRQRLLVLVKDHGEPALTATATVLVSLVENGQAPKISSLASESIASSEASLVTVNVYLIIAICAVSSLLVLTLLLYTALRCSARPINGACVPGKPMLVCSSAVGSWSYSQQRRQRVCSGEGPPKTDLMAFSPSLPPVLGSAEDTCQRERQVEHLKEVSS
SIO_010081: LOC116884732
subclass of: SO_0000673
so part of: LOC116884732
location: complement(7352326..7354731)
location: region:7352326-7354731:-1
so has part: feature:7352326-7354731:-1:exon

XP_032741837.1
type: Protein
SIO_000068: ncbiprotein

position:7352326:-1
position: 7352326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7354731:-1
position: 7354731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7352326-7354731:-1:exon

LOC116884507
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7364469..7367856)
location: region:7364469-7367856:-1
so has part: feature:7364469-7367856:-1:exon
subclass of: SO_0000010

116884507
type: Gene
SIO_000068: ncbigene

position:7364469:-1
position: 7364469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7367856:-1
position: 7367856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7364469-7367856:-1:exon

LOC116884507
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884507
product: protocadherin alpha-11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 101 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885635.1
SIO_010081: LOC116884507
subclass of: SO_0000673
so part of: LOC116884507
location: complement(7364469..7367856)
location: region:7364469-7367856:-1
so has part: feature:7364469-7367856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7364469-7367856:-1:exon

LOC116884507
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-11-like
translation: MLGFQRRGSCTPPPLRWLLLLTAWEVGSGQLYYSIPEEAKHGTFVGRIAQDLGLELAELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVEVEVRDINDNSPVFPLREQRLLISESKQPDSRFPLEGASDADIGENAVLVYRLSQNEYFSLESSTNSKQIKRLSLILKKTLDREKTPELNLLLTATDGGKPELTGTVQLWVRVLDVNDNDPVFDHLEYKVRVMENAAKETLVIKLNATDLDEGVNGQLVYSLMSIKPTGRHLFTLDENSGELRVNGTLDYEENKSYEIEVLATDKGTPPMVGHCVVLVEILDINDNSPEVTLTSLSLPVREDAQPNTVIALISISDLDSGINGQVTCSLTPNVPFKIVSTFKNYYSLVLDSSLDRERVSTYDLVVTARDGGSPSLCATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGAHIFTVSAEDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQFQVSAQDAGVPALGSNVTLQVFVLDENDNAPTLLPHGAVGPGGTVSELVPRSVSSGHVVTKVRAVDADSGYNAWLSYELQLGTGGVRSPFRVGLYTGEISTTRALDEVDAPRQTLLVLVKDHGEPALTATATVLVSLVENSQAPKSFSQASGRASAPDASLADVNVYLIIAICAVSSLLVLTLLLYTALRCSALPIINEAAGGPGKPMLVCSSAVGSWSYSQQRRQRVCSGEVLPKTDLMAFSPSLPPNMDRDERERQGSESNHPGQVSFLHIPPFW
SIO_010081: LOC116884507
subclass of: SO_0000673
so part of: LOC116884507
location: complement(7364547..7366973)
location: region:7364547-7366973:-1
so has part: feature:7364547-7366973:-1:exon

XP_032741526.1
type: Protein
SIO_000068: ncbiprotein

position:7364547:-1
position: 7364547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7366973:-1
position: 7366973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7364547-7366973:-1:exon

LOC116884508
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7370058..7373975)
location: region:7370058-7373975:-1
so has part: feature:7370058-7373975:-1:exon
subclass of: SO_0000010

116884508
type: Gene
SIO_000068: ncbigene

position:7370058:-1
position: 7370058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7373975:-1
position: 7373975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7370058-7373975:-1:exon

LOC116884508
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884508
product: protocadherin alpha-10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885636.1
SIO_010081: LOC116884508
subclass of: SO_0000673
so part of: LOC116884508
location: complement(7370058..7373975)
location: region:7370058-7373975:-1
so has part: feature:7370058-7373975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7370058-7373975:-1:exon

LOC116884508
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-10
translation: MFFVAMKYCHGSWCLLLSLLLFTIWEPGSGQLRYSVPEEAKHGTFVGRIAQDLGLELAELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGKSAECSIHLEVIVDRPLQVFHVEVEVKDINDNPPVFPTTQKNLFVSETRALDSRFSLEGASDADIGTNALLTYRLSPSEYFSLEVPTTDELVKPLELVLKKPLDRERDSELHLVVKATDGGKPELTGTLELHITVLDANDNAPAFDRAIYRVKLVENARNGTLVIRLNASDLDEGSNGQIFYSFAADISPKTEATFHIDPVSGEIKVNGKIDFEETNLWKIQAEAVDEGSPPMFGHCTILIEVLDINDNAPKLIVTSLSLPIREDAPVGTVIALISVTDPDSTVNGQVTCSLSPHVPFKLVSTFKNYYSLVLDGALDRETTADYQVVVTARDGGSPSLCTTASVSVEVADVNDNAPAFAQPEYTVFVKENNQPGAHIFTVSAVDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQFQVSARDAGVPAQGSNVTLQVFVLDENDNAPTLLPHRAVGAGGAVSELVPRSVGSGHVVAKVRAVDADSGYNAWLSYELQFGAGSVRSPFRVGLYTGEISITRALDEADVPRQRLLVLVKDHGEPALTATATVLVSLVESNQAPRTSSRVLAGTAASESPVVDVNVYLIIAICAVSSLLVLTLVLYTALRCSALPTEVTCGPGKPMLVCSSAVGSWSYSQKRRQRVCSGEVPPKTDLMAFSPSVPPGLGSGDSGVQQEIFENVSTEILGYIS
SIO_010081: LOC116884508
subclass of: SO_0000673
so part of: LOC116884508
location: complement(7370346..7372763)
location: region:7370346-7372763:-1
so has part: feature:7370346-7372763:-1:exon

XP_032741527.1
type: Protein
SIO_000068: ncbiprotein

position:7370346:-1
position: 7370346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7372763:-1
position: 7372763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7370346-7372763:-1:exon

LOC116884475
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884475
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7377345..7380213)
location: region:7377345-7380213:-1
so has part: feature:7377345-7380213:-1:exon
subclass of: SO_0000010

116884475
type: Gene
SIO_000068: ncbigene

position:7377345:-1
position: 7377345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7380213:-1
position: 7380213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7377345-7380213:-1:exon

LOC116884475
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884475
product: protocadherin alpha-9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 105 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885592.1
SIO_010081: LOC116884475
subclass of: SO_0000673
so part of: LOC116884475
location: complement(7377345..7380213)
location: region:7377345-7380213:-1
so has part: feature:7377345-7380213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7377345-7380213:-1:exon

LOC116884475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884475
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-9
translation: MSLGNRPEDIRTFVRPRWHIHGCLRQEKASVVISRCLSYGAWRLLLWLLLVATWDAGSAQLHYSIPEEAKHGTFVGRIAQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVEVEVRDINDNPPLFSVAEQKILVPESRLLDSQFPLEGASDADVGENSMLTYKLSSNEFFILDIVNKKGKDKFPVLVLRKLIDREENPQLKLLLTATDGGKPEFTGSVSLLIQVLDVNDNAPVFDRSVYEVKMYENQENQTLVIRLNATDSDEGINKEVEYSFSSLTSSTIKRKFLINEKTGEIRVNGAIDFEESNNYEIRVDATDKGYPPMVAHCTVLVEILDENDNTPEIVLTSLSLPVKEDALLGSVIALISVSDKDSGVNGQVTCSLANHVPFKLVSTFKNYYSLVLDSALDRETTTDYKVVVIARDGGSPSLCATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGAHIFTVSAVDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQFQVSARDAGVPALGSNVTLQVFVLDENDNAPTLLGQQSSGPMGEFSQLVSRSVGAGHVVSKVRAVDADSGYNAWLCYEFHPAVGARSPFRVGLYTGEISTTRDLDESDLPRQRLLVLVKDHGEPMLITTATVLVSLVENGQVPKASSQGLPNSSRREESLVDVNVYLIIAICAVSSLLVLTLLLYIALRCSAVPMQGGCGLGKPTLVCSSAVGTWSYSQQRQQRVCSGEGPPKTDLMAFSPSLAPCPVTEVGMENHSAGGDLSGKVG
SIO_010081: LOC116884475
subclass of: SO_0000673
so part of: LOC116884475
location: complement(7377395..7379884)
location: region:7377395-7379884:-1
so has part: feature:7377395-7379884:-1:exon

XP_032741483.1
type: Protein
SIO_000068: ncbiprotein

position:7377395:-1
position: 7377395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7379884:-1
position: 7379884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7377395-7379884:-1:exon

LOC116884907
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7383472..7388204)
location: region:7383472-7388204:-1
so has part: feature:7383472-7388204:-1:exon
subclass of: SO_0000010

116884907
type: Gene
SIO_000068: ncbigene

position:7383472:-1
position: 7383472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7388204:-1
position: 7388204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7383472-7388204:-1:exon

LOC116884907
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884907
product: protocadherin alpha-7-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886129.1
SIO_010081: LOC116884907
subclass of: SO_0000673
so part of: LOC116884907
location: complement(7383472..7388204)
location: region:7383472-7388204:-1
so has part: feature:7383472-7388204:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7383472-7388204:-1:exon

LOC116884907
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884907
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin alpha-7-like
translation: MLCLGGALPEGRFLVLSLLLLAVWEVGSGQLRYSIPEETKHGTFVGRIAQDLELQLPELVPGLFQLDSKGFGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVEVEVRDINDNPPMFPATQKTLFIPESRLLDSWFPLEGASDADVGSNALLTYRLSTNEHFSLDVPPNHEQVKPLGLVLRKPLDREEAAEMRLLLRLRTESKPELTGTVQLLITVLDVNDNAPAFDRSLYTVKLPENVPNGTLVIKVNASDLDEGVNGEVMYSFSSDVSSDIKSKFHVDAVSGEITVIGIIDFEECKAYKIPLEARDKGFPPLIGHCTVLVEVVDANDNAPQLNVKTLWLPVKEDAQLGKIIALISVIDLDSGANGQVTCSLANHVPFKLVSTFKNYYSLVLDSALDRETTADYQVVVTAEDRGSPTLRATATVSVEVADVNDNVPAFAQPEYTVFVKENNPPGAHIFTVSAMDADAQENALVSYSLVERRVGGRFLSSYVSVHAESGKVFALQPLDHEELELLQFQVSARDAGVPALGSNVTLQVFVLDENDNVPTLLGSGTGGSDGVFNHLLPRSVDPGHVVAKVRAVDADSGYNAWLSYELLSLPGSMRSPFRVGLYTGEISTTRSLDETDGTRQRLLLLVKDHGEPQLTATVTMLVSLVESGQAPKASSRSSVGVSVPESSLVNVNVYLIIAICAVSSLLVLTLLLYSALRCSAMPTGGACGSGKPMLVCSSAVGTWSYSQQRQQRVCSGEGLPKTDLMAFSPGLPPCPGSAEPSVSLDSSEKVSCRIVFIHIFICGRFFQKTPLVYLSTVEKSTIIPVF
SIO_010081: LOC116884907
subclass of: SO_0000673
so part of: LOC116884907
location: complement(7383472..7385968)
location: region:7383472-7385968:-1
so has part: feature:7383472-7385968:-1:exon

XP_032742020.1
type: Protein
SIO_000068: ncbiprotein

position:7385968:-1
position: 7385968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7383472-7385968:-1:exon

LOC116884477
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884477
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7388218..7394679)
location: region:7388218-7394679:-1
so has part: feature:7388218-7394679:-1:exon
subclass of: SO_0000010

116884477
type: Gene
SIO_000068: ncbigene

position:7388218:-1
position: 7388218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7394679:-1
position: 7394679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7388218-7394679:-1:exon

LOC116884477
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884477
product: protocadherin alpha-8-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 87 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885593.1
SIO_010081: LOC116884477
subclass of: SO_0000673
so part of: LOC116884477
location: complement(7388218..7394679)
location: region:7388218-7394679:-1
so has part: feature:7388218-7394679:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7388218-7394679:-1:exon

LOC116884477
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884477
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-8-like
translation: MVFARRGGPDSRRLLLLLLLFSIWEAGSGQLHYSIPEEAKHGTFVGRIAQDLGLELAELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSVHLEVIVDRPLQVFHVEVEVRDINDNPPVFPVKEQKLHISESRMLDSRFLLEGAFDADIGVNSAVTYRLDSNDYFTLIVSSKNEESKQVELALRKLLDREDAPEHKLLLTATDGGKPELTGSVQLLVTVLDVNDNAPTFQHPEYEVRILENSDNGTTVIRLNASDRDEGTNSAISYSFNRLVSPRILDQFSIDADTGEIVIQGNLDFEQVDVYKIRVDATDKGHPPMAGHCTVLVRVLDENDNVPQITLTSLSLPVREDAALGTVIALISVSDLDSGANGRVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRETTADYQVVVTAQDGGLPSLWATASVSVEVADVNDNAPAFAQPEYTVFVNENNPPGAHIFTVSAMDEDAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQFQVSARDAGVPALGSNVTLQVFVLDENDNAPSILLAGTEGLGSVATDLIHRSVSVGQVVAKVRAVDSDSGYNAWLSYELQPSVGPRSPFRVGLYTGEISTTRALDESDAPRQRLLVLVKDHGEPTLTSTATILVSLVESSQAPKASSQASSRASVPEASLVDINVYLIIAICAVSSLLVLTLLLYTALRCSTTPTDGVCAPGKPMLVCSSAVGSWSYSQQRRQRVCSGEGPPKTDLMAFSPSLPPRPVSEVIGEGQDLNDHHGFQVSPFIFRNI
SIO_010081: LOC116884477
subclass of: SO_0000673
so part of: LOC116884477
location: complement(7388816..7391236)
location: region:7388816-7391236:-1
so has part: feature:7388816-7391236:-1:exon

XP_032741484.1
type: Protein
SIO_000068: ncbiprotein

position:7388816:-1
position: 7388816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7391236:-1
position: 7391236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7388816-7391236:-1:exon

LOC116884706
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7394722..7398044)
location: region:7394722-7398044:-1
so has part: feature:7394722-7398044:-1:exon
subclass of: SO_0000010

116884706
type: Gene
SIO_000068: ncbigene

position:7394722:-1
position: 7394722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7398044:-1
position: 7398044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7394722-7398044:-1:exon

LOC116884706
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884706
product: protocadherin alpha-7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 91 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885894.1
SIO_010081: LOC116884706
subclass of: SO_0000673
so part of: LOC116884706
location: complement(7394722..7398044)
location: region:7394722-7398044:-1
so has part: feature:7394722-7398044:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7394722-7398044:-1:exon

LOC116884706
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-7
translation: MVNLRGYNWKSQQLLLLLIILAVWEAGNSQLHYSVPEEAKHGTFVGRIAQDLGLELAELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVEVEVRDINDNPPLFPTTQKTLFILESRLLDSRFPLEGASDADVGSNALLTYRLSTNEHFSLDVPPNHEQVKPLGLVLRKPLDREEAAEMRLLLTATDGGKPELTGTVQLLITVLDVNDNAPAFDRSLYTVKLPENVPNGTLVIKVNASDLDEGVNGEVMYSFSSDVSSDIKSKFHVDAVSGEITVIGIIDFEECKAYKIPLEARDKGFPQLPGHCTVLVEVVDANDNAPELTISSLSLPVSEDSQPGRVVTLISVFDRDSGTNGQVTCSLNPHIPFKLVSTFKNYYSLVLDSALDRETISNYDVVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGAHIFTVSAEDADAQENALVSYSLVERRVGERLLSSYVSVHSESGKVFALQPLDHEELELLQFQVNAKDAGVPALGSNVTLQVFVLDENDNAPTLLGPLANGAGGTMSEVVSRALVPGQVVAKVRAVDEDSGYNAWLSYELQPAAGGVRIPFRVGLYTGEISTTRALEETDALRQCLLVLVKDHGEPSLTATATVLLSLVDSGQTQKVSTKVSVGASSVDQGLVDVNVYLIIAICAVSSLLVLTLLLYTALRCSATPADGACAPGKPMLVCSSAVGSWSYSQQRRQRVCSGEGLPKTDLMAFSPSLPQGPSSTDNVSLKYFSLQEWKK
SIO_010081: LOC116884706
subclass of: SO_0000673
so part of: LOC116884706
location: complement(7394767..7397163)
location: region:7394767-7397163:-1
so has part: feature:7394767-7397163:-1:exon

XP_032741785.1
type: Protein
SIO_000068: ncbiprotein

position:7394767:-1
position: 7394767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7397163:-1
position: 7397163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7394767-7397163:-1:exon

LOC116884908
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7400804..7403721)
location: region:7400804-7403721:-1
so has part: feature:7400804-7403721:-1:exon
subclass of: SO_0000010

116884908
type: Gene
SIO_000068: ncbigene

position:7400804:-1
position: 7400804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7403721:-1
position: 7403721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7400804-7403721:-1:exon

LOC116884908
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884908
product: protocadherin alpha-6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 89 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886130.1
SIO_010081: LOC116884908
subclass of: SO_0000673
so part of: LOC116884908
location: complement(7400804..7403721)
location: region:7400804-7403721:-1
so has part: feature:7400804-7403721:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7400804-7403721:-1:exon

LOC116884908
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-6-like
translation: MRRKIDLLMETKQETFYMDFTTEGRLGTRCLLLSLLLLAVWEAGSGQLHYSVPEEAKHGTFVGRIAQDLGLELAELVPRLFRVATKHRGDLLEVNLQNGILFVNSRIDREELCGRNAECSIHLEVIVDRPLQVFHVEVEVRDINDNAPVFSVKEQRMLIYESRLPDSLFPLEGASDADVGLNSILTYKLSSSEYFGLDVKTNSDGNKQVRLLLKKSLDREDAPEHKLLLTATDGGKPELTGSVQLLVTVLDVNDNAPTFQHPEYEVRILENSDNGTTVIRLNASDRDEGTNSAISYSFNRLVSPRILDQFSIDADTGEIVIQGNLDFEQVDVYKIHVDATDKGHPPMAGHCTVLVRVLDENDNVPQITLTSLSLPVREDAALGTVIALISVSDLDSGANGRVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRETTADYQVVVTAQDGGSPSLCTTVSVSVEVADVNDNAPAFAQPEYTVFVKENNSPGAHIFTVDAVDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQFQVSARDAGVPALGSNVTLQVFVLDENDNAPALLGPWTQGSGGIVSELVSPSVGAGQVVTKVRAVDADSGYNAWLSYELHPLTGGTRSLFRVGLYTGEISTTRALEEADAPRHRLLVLVKDHGEPALMATATVLVSLVENSQTPKASSRAAGSTGQEVSLVNVNVYLIIAICAVSSLLVLTLMVYTALRCSVPPTEGVCGAGKPMLVCSSAVGSWSYSQQRRQKVCSGEGPPKTDLMAFSPGLPPCPVVGEHQDSNEDHCSRVSPRFHNYLYGLKFVLFFYS
SIO_010081: LOC116884908
subclass of: SO_0000673
so part of: LOC116884908
location: complement(7400804..7403299)
location: region:7400804-7403299:-1
so has part: feature:7400804-7403299:-1:exon

XP_032742021.1
type: Protein
SIO_000068: ncbiprotein

position:7403299:-1
position: 7403299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7400804-7403299:-1:exon

LOC116884909
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7407733..7410310)
location: region:7407733-7410310:-1
so has part: feature:7407733-7410310:-1:exon
subclass of: SO_0000010

116884909
type: Gene
SIO_000068: ncbigene

position:7407733:-1
position: 7407733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7410310:-1
position: 7410310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7407733-7410310:-1:exon

LOC116884909
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884909
product: protocadherin alpha-5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032886131.1
SIO_010081: LOC116884909
subclass of: SO_0000673
so part of: LOC116884909
location: complement(7407733..7410310)
location: region:7407733-7410310:-1
so has part: feature:7407733-7410310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7407733-7410310:-1:exon

LOC116884909
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10117
gene: LOC116884909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-5-like
translation: MVYSQRGSPGFRRLLISFVLLAAWEAGSGQLHYSIPEEAKHGTFVGRIAQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVEVEVRDINDNPPTFSGPEQRLFILELRMPDSRFPVEGASDLDVGANAALSYKVNPNEYFDLDVKRNEEETSILHLVLKKPLDREETQEHRLLLMATDGGKPELTGTVQLLIDVLDANDNAPEFDRSVYNVRLLENTPNETLVIKLNASDADEGINKEILYFFSNLVPDGVKSKFTIDSTSGEIKVKGELDYEDCKLYEINIDAVDRSSFPLAGHCKVIVKLVDVNDNVPEMAITSIFLPIKEDAPLATVIALISVSDRDSGANGQVTCSLTPHIPFKLVSTFKNYYSLVLDRALDRETISNYDVVVTARDGGSPSLWATASVSVEVADVNDNVPAFAQPEYTVFVKENNPPGAHIFTVSAVDADTQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQFQVSARDAGVPALGSNVTLQVFVLDENDNAPSLLGPQGGGATIELLSRSVSSGHVVAKVRAVDADSGYNAWLSYELQPATGAVRSPFRVGLYTGEISTTRVLDEADMPRQRLLVLVKDHGEPPLTATATFLVSLVENSQTPKVSSRVLVGTSGSDSTLIDINVYLIIAICAVSSLLVLTLLLYTALRCSATPADGACAPGKPMLVCSSEVGTWSYSQQRRQKVCSGEGPPKTDLMAFSPSLPQGPSSSENVSFEFCKSYSLNFFS
SIO_010081: LOC116884909
subclass of: SO_0000673
so part of: LOC116884909
location: complement(7407733..7410126)
location: region:7407733-7410126:-1
so has part: feature:7407733-7410126:-1:exon

XP_032742022.1
type: Protein
SIO_000068: ncbiprotein

position:7410126:-1
position: 7410126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7407733-7410126:-1:exon

LOC116884307
type: Gene
subclass of: SO_0000704
RO_0002162: 10117
gene: LOC116884307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7413635..7421424)
location: region:7413635-7421424:-1
so has part: feature:7413635-7421424:-1:exon
subclass of: SO_0000010

116884307
type: Gene
SIO_000068: ncbigene

position:7413635:-1
position: 7413635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7421424:-1
position: 7421424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7413635-7421424:-1:exon

LOC116884307
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10117
gene: LOC116884307
product: protocadherin alpha-4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 106 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032885415.1
SIO_010081: LOC116884307
subclass of: SO_0000673
so part of: LOC116884307
location: complement(7413635..7421424)
location: region:7413635-7421424:-1
so has part: feature:7413635-7421424:-1:exon