Rattus norvegicus strain BN/NHsdMcwi chromosome Y, mRatBN7.2, whole genome shotgun sequence.
type: Entry
definition: Rattus norvegicus strain BN/NHsdMcwi chromosome Y, mRatBN7.2, whole genome shotgun sequence.
sequence version: NC_051357.1
sequence date: 2021-01-21
sequence: sequence
division: CON
label: NC_051357.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA677964
dblink: SAMN16261960
keyword: WGS
keyword: RefSeq
source: Rattus norvegicus (Norway rat)
organism: Rattus norvegicus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM026995.1.\nAssembly name: mRatBN7.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Wellcome Sanger Institute on\n2020/11/10. The original whole-genome shotgun project has the\naccession JACYVU000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Wellcome Sanger Institute\nAssembly Date :: 20-MAY-2020\nAssembly Method :: FALCON-Unzip v. 2020\nAssembly Name :: mRatBN7.1\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 92.0x\nSequencing Technology :: PacBio Sequel; 10X Genomics Chromium;\n BioNano; Arima Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rattus norvegicus Annotation Release\n 108\nAnnotation Version :: 108\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 18315841
topology: linear
so has quality: SO_0000987
location: 1..18315841
location: region:1-18315841:1
RO_0002162: 10116

NC_051357
type: RefSeq
SIO_000068: refseq

PRJNA677964
type: BioProject
SIO_000068: bioproject

SAMN16261960
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18315841:1
position: 18315841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-18315841:1:source
so part of: sequence
organism: Rattus norvegicus
mol type: genomic DNA
strain: BN/NHsdMcwi
chromosome: Y
sex: male
tissue type: kidney
country: USA: Wisconsin, Milwaukee, Medical College of Wisconsin
collection date: 2019-03-08
collected by: Rebecca Schilling

10116
type: Taxonomy
SIO_000068: taxonomy

LOC103694573
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694573
note: transmembrane protein 106B pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(97574..98592)
location: region:97574-98592:-1
so has part: feature:97574-98592:-1:exon

103694573
type: Gene
SIO_000068: ncbigene

9317751
type: RGD
SIO_000068: rgd

position:97574:-1
position: 97574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98592:-1
position: 98592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97574-98592:-1:exon

LOC103694574
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694574
note: ribosome biogenesis regulatory protein homolog; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(145253..151671)
location: region:145253-151671:-1
so has part: feature:145253-151671:-1:exon

103694574
type: Gene
SIO_000068: ncbigene

9180305
type: RGD
SIO_000068: rgd

position:145253:-1
position: 145253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151671:-1
position: 151671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145253-151671:-1:exon

LOC103694560
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 156340..158060
location: region:156340-158060:1
so has part: feature:156340-158060:1:exon
subclass of: SO_0000011

103694560
type: Gene
SIO_000068: ncbigene

9473693
type: RGD
SIO_000068: rgd

position:156340:1
position: 156340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158060:1
position: 158060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156340-158060:1:exon

LOC103694560
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694560
product: uncharacterized LOC103694560
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_597833.3
SIO_010081: LOC103694560
subclass of: SO_0000673
so part of: LOC103694560
location: join(156340..156533,157591..157647,157850..158060)
location: region:156340-158060:1
so has part: feature:156340-156533:1:exon
so has part: feature:157591-157647:1:exon
so has part: feature:157850-158060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156340-156533:1:exon

position:156533:1
position: 156533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:157591-157647:1:exon

position:157591:1
position: 157591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157647:1
position: 157647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:157850-158060:1:exon

position:157850:1
position: 157850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108353317
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC108353317
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 317785..322721
location: region:317785-322721:1
so has part: feature:317785-322721:1:exon
subclass of: SO_0000011

108353317
type: Gene
SIO_000068: ncbigene

11448654
type: RGD
SIO_000068: rgd

position:317785:1
position: 317785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322721:1
position: 322721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317785-322721:1:exon

LOC108353317
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC108353317
product: uncharacterized LOC108353317
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001842843.2
SIO_010081: LOC108353317
subclass of: SO_0000673
so part of: LOC108353317
location: join(317785..318200,318856..318890,321505..322721)
location: region:317785-322721:1
so has part: feature:317785-318200:1:exon
so has part: feature:318856-318890:1:exon
so has part: feature:321505-322721:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317785-318200:1:exon

position:318200:1
position: 318200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:318856-318890:1:exon

position:318856:1
position: 318856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318890:1
position: 318890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321505-322721:1:exon

position:321505:1
position: 321505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120099585
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 346876..350899
location: region:346876-350899:1
so has part: feature:346876-350899:1:exon

120099585
type: Gene
SIO_000068: ncbigene

position:346876:1
position: 346876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350899:1
position: 350899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346876-350899:1:exon

LOC120099585
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099585
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120099585
subclass of: SO_0000673
so part of: LOC120099585
location: 346876..347346
location: region:346876-347346:1
so has part: feature:346876-347346:1:exon

position:347346:1
position: 347346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346876-347346:1:exon

LOC120099585
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099585
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120099585
subclass of: SO_0000673
so part of: LOC120099585
location: 350101..350899
location: region:350101-350899:1
so has part: feature:350101-350899:1:exon

position:350101:1
position: 350101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350101-350899:1:exon

LOC120099582
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099582
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 376943..379219
location: region:376943-379219:1
so has part: feature:376943-379219:1:exon
subclass of: SO_0000010

120099582
type: Gene
SIO_000068: ncbigene

position:376943:1
position: 376943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379219:1
position: 379219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376943-379219:1:exon

LOC120099582
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: LOC120099582
product: sex-determining region Y protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039100660.1
SIO_010081: LOC120099582
subclass of: SO_0000673
so part of: LOC120099582
location: 376943..379219
location: region:376943-379219:1
so has part: feature:376943-379219:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:376943-379219:1:exon

LOC120099582
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: LOC120099582
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sex-determining region Y protein-like
translation: MEGHVKRPMNAFMVWSRGERRKLAQQNPSMQNSEISKQLGYQWKSLTEAEKRPFFQEAQRLKTLHREKYPNYKYQTHRRVKVPQRSYTLQREVASTKLYNLLQWDNNLHTIIYGQDWARAAHQSSKNQKSIYLQPVDIPTGYPLQQKQQHQQQQHVHLQQQQQQQHQFH
SIO_010081: LOC120099582
subclass of: SO_0000673
so part of: LOC120099582
location: 377131..377640
location: region:377131-377640:1
so has part: feature:377131-377640:1:exon

XP_038956588.1
type: Protein
SIO_000068: ncbiprotein

position:377131:1
position: 377131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377640:1
position: 377640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377131-377640:1:exon

LOC103694543
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(401226..405973)
location: region:401226-405973:-1
so has part: feature:401226-405973:-1:exon
subclass of: SO_0000011

103694543
type: Gene
SIO_000068: ncbigene

9260702
type: RGD
SIO_000068: rgd

position:401226:-1
position: 401226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405973:-1
position: 405973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401226-405973:-1:exon

LOC103694543
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694543
product: lysine-specific demethylase 5D-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 110 samples with support for all annotated introns
transcript id: XR_005498711.1
SIO_010081: LOC103694543
subclass of: SO_0000673
so part of: LOC103694543
location: complement(join(401226..401384,401469..401588,404694..405973))
location: region:401226-405973:-1
so has part: feature:404694-405973:-1:exon
so has part: feature:401469-401588:-1:exon
so has part: feature:401226-401384:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404694-405973:-1:exon

position:404694:-1
position: 404694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:401469-401588:-1:exon

position:401469:-1
position: 401469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401588:-1
position: 401588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:401226-401384:-1:exon

position:401384:-1
position: 401384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103694570
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 408061..415821
location: region:408061-415821:1
so has part: feature:408061-415821:1:exon

103694570
type: Gene
SIO_000068: ncbigene

9151603
type: RGD
SIO_000068: rgd

position:408061:1
position: 408061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415821:1
position: 415821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408061-415821:1:exon

LOC103694570
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC103694570
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC103694570
subclass of: SO_0000673
so part of: LOC103694570
location: 408061..408072
location: region:408061-408072:1
so has part: feature:408061-408072:1:exon

position:408072:1
position: 408072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408061-408072:1:exon

LOC120099618
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099618
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 408217..408321
location: region:408217-408321:1
so has part: feature:408217-408321:1:exon
subclass of: SO_0000623

120099618
type: Gene
SIO_000068: ncbigene

position:408217:1
position: 408217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408321:1
position: 408321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408217-408321:1:exon

LOC120099618
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: snRNA
gene: LOC120099618
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005498741.1
SIO_010081: LOC120099618
subclass of: SO_0000673
so part of: LOC120099618
location: 408217..408321
location: region:408217-408321:1
so has part: feature:408217-408321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408217-408321:1:exon

LOC103694570
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC103694570
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC103694570
subclass of: SO_0000673
so part of: LOC103694570
location: 409592..409854
location: region:409592-409854:1
so has part: feature:409592-409854:1:exon

position:409592:1
position: 409592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409854:1
position: 409854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409592-409854:1:exon

LOC103694569
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 410119..410921
location: region:410119-410921:1
so has part: feature:410119-410921:1:exon

103694569
type: Gene
SIO_000068: ncbigene

9417583
type: RGD
SIO_000068: rgd

position:410119:1
position: 410119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410921:1
position: 410921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410119-410921:1:exon

LOC103694569
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC103694569
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC103694569
subclass of: SO_0000673
so part of: LOC103694569
location: 410119..410921
location: region:410119-410921:1
so has part: feature:410119-410921:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:410119-410921:1:exon

LOC103694570
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC103694570
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC103694570
subclass of: SO_0000673
so part of: LOC103694570
location: 412322..412550
location: region:412322-412550:1
so has part: feature:412322-412550:1:exon

position:412322:1
position: 412322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412550:1
position: 412550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412322-412550:1:exon

Rbmy1j
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: Rbmy1j
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 415117..425460
location: region:415117-425460:1
so has part: feature:415117-425460:1:exon
subclass of: SO_0000010

103694544
type: Gene
SIO_000068: ncbigene

9125062
type: RGD
SIO_000068: rgd

position:415117:1
position: 415117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425460:1
position: 425460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415117-425460:1:exon

Rbmy1j
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Rbmy1j
product: RNA binding motif protein, Y-linked, family 1, member J
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_017602442.2
SIO_010081: Rbmy1j
subclass of: SO_0000673
so part of: Rbmy1j
location: join(415117..415231,419187..419299,419676..419782,420377..420554,422105..422257,422823..422931,424241..424330,424408..424496,424796..425460)
location: region:415117-425460:1
so has part: feature:415117-415231:1:exon
so has part: feature:419187-419299:1:exon
so has part: feature:419676-419782:1:exon
so has part: feature:420377-420554:1:exon
so has part: feature:422105-422257:1:exon
so has part: feature:422823-422931:1:exon
so has part: feature:424241-424330:1:exon
so has part: feature:424408-424496:1:exon
so has part: feature:424796-425460:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:415117-415231:1:exon

position:415231:1
position: 415231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:419187-419299:1:exon

position:419187:1
position: 419187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419299:1
position: 419299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:419676-419782:1:exon

position:419676:1
position: 419676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419782:1
position: 419782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:420377-420554:1:exon

position:420377:1
position: 420377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420554:1
position: 420554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:422105-422257:1:exon

position:422105:1
position: 422105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422257:1
position: 422257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:422823-422931:1:exon

position:422823:1
position: 422823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422931:1
position: 422931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:424241-424330:1:exon

position:424241:1
position: 424241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424330:1
position: 424330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:424408-424496:1:exon

position:424408:1
position: 424408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424496:1
position: 424496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:424796-425460:1:exon

position:424796:1
position: 424796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103694570
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC103694570
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC103694570
subclass of: SO_0000673
so part of: LOC103694570
location: 415654..415821
location: region:415654-415821:1
so has part: feature:415654-415821:1:exon

position:415654:1
position: 415654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415654-415821:1:exon

Rbmy1j
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Rbmy1j
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, Y chromosome, family 1 member B
translation: MAESEQPGKIFIGGLNLETRQKTLQVIFGRFGPITHVILMRDRETKKSRGFAFVTFQCPGDAKNAVKEMNGVSLDGKRIKVEQARRPSSLERSSKRRPLSFSRTRGASRILKCGRGGSSRGRSRPSRERNLDDGRYTPNFNISSSGRHFAVKRSTSSKREGPPSKRSATSALTRANPGLRGREPHGREVSRNMPRREPVSSRRDEYPLPRDDGYSSNDSYSRRYASTSRGYRDYGNYSSRDEHASKVFSDHAGYHGGRDRDFSEYLSGSSYRDTYESYGSFHEEPSARGTYTGNNRYDDYSSSRGGYGGGRETYSGSRSDIYGYERSGRQVLPPIDREYSERGGREERGHSPMDRLYRASHESYTISSRFGGYHGGHEETRYESGGRR
SIO_010081: Rbmy1j
subclass of: SO_0000673
so part of: Rbmy1j
location: join(419191..419299,419676..419782,420377..420554,422105..422257,422823..422931,424241..424330,424408..424496,424796..425127)
location: region:419191-425127:1
so has part: feature:419191-419299:1:exon
so has part: feature:419676-419782:1:exon
so has part: feature:420377-420554:1:exon
so has part: feature:422105-422257:1:exon
so has part: feature:422823-422931:1:exon
so has part: feature:424241-424330:1:exon
so has part: feature:424408-424496:1:exon
so has part: feature:424796-425127:1:exon

XP_017457931.1
type: Protein
SIO_000068: ncbiprotein

position:419191:1
position: 419191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425127:1
position: 425127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419191-419299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419676-419782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420377-420554:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422105-422257:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422823-422931:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424241-424330:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424408-424496:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:424796-425127:1:exon

LOC103694545
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 440551..443183
location: region:440551-443183:1
so has part: feature:440551-443183:1:exon
subclass of: SO_0000010

103694545
type: Gene
SIO_000068: ncbigene

9470618
type: RGD
SIO_000068: rgd

position:440551:1
position: 440551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443183:1
position: 443183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440551-443183:1:exon

LOC103694545
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: LOC103694545
product: sex-determining region Y protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008773683.3
SIO_010081: LOC103694545
subclass of: SO_0000673
so part of: LOC103694545
location: 440551..443183
location: region:440551-443183:1
so has part: feature:440551-443183:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440551-443183:1:exon

LOC103694545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: LOC103694545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sex-determining region Y protein-like
translation: MEGHVKRPMNAFMVWSRGERRKLAQQNPSMQNSEISKQLGYQWKSLTEAEKRPFFQEAQRLKTLHREKYPNYKYQTHRRVKVPQRSYTLQREVASTKLYNLLQWDNNLHTIIYGQDWARAAHQSSKNQKSIYLQPVDIPTGYPLQQKQQHQQQQHVHLQQQQQQQQHQFH
SIO_010081: LOC103694545
subclass of: SO_0000673
so part of: LOC103694545
location: 441525..442037
location: region:441525-442037:1
so has part: feature:441525-442037:1:exon

XP_008771905.1
type: Protein
SIO_000068: ncbiprotein

position:441525:1
position: 441525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442037:1
position: 442037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441525-442037:1:exon

LOC103694546
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694546
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 446022..446437
location: region:446022-446437:1
so has part: feature:446022-446437:1:exon

103694546
type: Gene
SIO_000068: ncbigene

9254052
type: RGD
SIO_000068: rgd

position:446022:1
position: 446022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446437:1
position: 446437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446022-446437:1:exon

LOC103694546
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC103694546
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC103694546
subclass of: SO_0000673
so part of: LOC103694546
location: 446022..446437
location: region:446022-446437:1
so has part: feature:446022-446437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:446022-446437:1:exon

Uba1y
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: Uba1y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 457594..480231
location: region:457594-480231:1
so has part: feature:457594-480231:1:exon
subclass of: SO_0000010

25225
type: Gene
SIO_000068: ncbigene

3925
type: RGD
SIO_000068: rgd

position:457594:1
position: 457594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480231:1
position: 480231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457594-480231:1:exon

Uba1y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uba1y
product: ubiquitin-activating enzyme, Chr Y
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_008773685.3
SIO_010081: Uba1y
subclass of: SO_0000673
so part of: Uba1y
location: join(457594..457789,459843..459959,460082..460137,460222..460390,460477..460611,461171..461277,461492..461582,462264..462396,463934..464031,464126..464272,464384..464560,464670..464774,464861..464941,465276..465431,467175..467340,467552..467748,469644..469708,469908..470103,470708..470782,470889..471078,472218..472306,478578..478670,478794..478985,479552..479653,479744..479844,480006..480231)
location: region:457594-480231:1
so has part: feature:457594-457789:1:exon
so has part: feature:459843-459959:1:exon
so has part: feature:460082-460137:1:exon
so has part: feature:460222-460390:1:exon
so has part: feature:460477-460611:1:exon
so has part: feature:461171-461277:1:exon
so has part: feature:461492-461582:1:exon
so has part: feature:462264-462396:1:exon
so has part: feature:463934-464031:1:exon
so has part: feature:464126-464272:1:exon
so has part: feature:464384-464560:1:exon
so has part: feature:464670-464774:1:exon
so has part: feature:464861-464941:1:exon
so has part: feature:465276-465431:1:exon
so has part: feature:467175-467340:1:exon
so has part: feature:467552-467748:1:exon
so has part: feature:469644-469708:1:exon
so has part: feature:469908-470103:1:exon
so has part: feature:470708-470782:1:exon
so has part: feature:470889-471078:1:exon
so has part: feature:472218-472306:1:exon
so has part: feature:478578-478670:1:exon
so has part: feature:478794-478985:1:exon
so has part: feature:479552-479653:1:exon
so has part: feature:479744-479844:1:exon
so has part: feature:480006-480231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:457594-457789:1:exon

position:457789:1
position: 457789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:459843-459959:1:exon

position:459843:1
position: 459843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459959:1
position: 459959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:460082-460137:1:exon

position:460082:1
position: 460082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460137:1
position: 460137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:460222-460390:1:exon

position:460222:1
position: 460222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460390:1
position: 460390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:460477-460611:1:exon

position:460477:1
position: 460477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460611:1
position: 460611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:461171-461277:1:exon

position:461171:1
position: 461171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461277:1
position: 461277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:461492-461582:1:exon

position:461492:1
position: 461492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461582:1
position: 461582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:462264-462396:1:exon

position:462264:1
position: 462264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462396:1
position: 462396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:463934-464031:1:exon

position:463934:1
position: 463934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464031:1
position: 464031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:464126-464272:1:exon

position:464126:1
position: 464126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464272:1
position: 464272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:464384-464560:1:exon

position:464384:1
position: 464384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464560:1
position: 464560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:464670-464774:1:exon

position:464670:1
position: 464670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464774:1
position: 464774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:464861-464941:1:exon

position:464861:1
position: 464861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464941:1
position: 464941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:465276-465431:1:exon

position:465276:1
position: 465276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465431:1
position: 465431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:467175-467340:1:exon

position:467175:1
position: 467175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467340:1
position: 467340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:467552-467748:1:exon

position:467552:1
position: 467552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467748:1
position: 467748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:469644-469708:1:exon

position:469644:1
position: 469644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469708:1
position: 469708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:469908-470103:1:exon

position:469908:1
position: 469908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470103:1
position: 470103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:470708-470782:1:exon

position:470708:1
position: 470708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470782:1
position: 470782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:470889-471078:1:exon

position:470889:1
position: 470889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471078:1
position: 471078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:472218-472306:1:exon

position:472218:1
position: 472218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472306:1
position: 472306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:478578-478670:1:exon

position:478578:1
position: 478578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478670:1
position: 478670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:478794-478985:1:exon

position:478794:1
position: 478794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478985:1
position: 478985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:479552-479653:1:exon

position:479552:1
position: 479552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479653:1
position: 479653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:479744-479844:1:exon

position:479744:1
position: 479744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479844:1
position: 479844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:480006-480231:1:exon

position:480006:1
position: 480006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Uba1y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uba1y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-like modifier-activating enzyme 1 Y
translation: MSSSVLSKKRRVSGPDSEVDSSWPSTHSVMFGAPPGPNSGMSKNKEMDIDESLYSRQLYVLGHEAMKHLQTSSVLISGLQGLGVEIAKNIILGGVKAVTLHDQGTAQWADLSSQFYLHEEDIGKNRAEVSQPRLAELNSYVPVHTYTGPLVDDFLSGFQVVVLTNTPLEYQLQVGEFCHSHGIKLVVADTRGLVGQLFCDFGEEMILTDANGEQPLSAMVSMITKENPGIVTCLEETRHGFESGDFVSFTEVQGMSELNGIGPMEIKVLGPYSFSICDTSSFSEYTRGGIVSQVKVSQKISFKSLVASLAEPEFVITDFAKCCRPAQLHIGFQALHQFCTQHSRPPRPHNEEDAAEMVTLAQAVNAQSLPAVQQDCLDIDLIRKLAYVAAGDLAPMSAFIGGLAAQEVMKACSGKFMPIRQWLYFDALECLPEHRVAFMEDKCLPRQNRYDGQVAVFGSDLQEKLGKQKYFLVGAGAIGCELLKNFAMIGLGCGEGGEITVTDMDTIEKSNLNRQFLFRPWDVTKLKSETAAAAVRDINPHIRVCSHQNRVGPETEHVYDDDFFQNLDGVANALDNVDARLYMDRRCVYYRKPLLESGTLGTKGNVQVVVPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQSAENVNQYLMDPKFMERTLQLAGTQPLEVLEAIQCSLVLQRPQTWADCVTWAYQHWHTQYSHNIQQLLHNFPPDQLTSSGVLFWSGPKRCPHPLTFDTNNPLHLDYVMAAANLFAQTYGLEGSQDCAAVTTLLQSLPAPKFAPKSGIRIHVSEQELQSTSATVDDSHLEELKTSLPTPDKMLGFKMHPIDFEKDDDSNFHMDFIVAASNLRAENYDIPPADRHKSKLIAGKIIPAIATTTSAVVGLVCLELYKVVQGHQQLDSFKNSFINLALPFFSFSAPLAPGYHQYYDKKWTLWDRFDVQGLQPSGEEMTLKQFLDYFKTEHKLEITILSQGVSMLYSFFMPATKLQERLDQPMTEIVSRVSKRKLGQHVKSLVFELCCNNESGDDIEVPYVRYIIG
SIO_010081: Uba1y
subclass of: SO_0000673
so part of: Uba1y
location: join(459843..459959,460082..460137,460222..460390,460477..460611,461171..461277,461492..461582,462264..462396,463934..464031,464126..464272,464384..464560,464670..464774,464861..464941,465276..465431,467175..467340,467552..467748,469644..469708,469908..470103,470708..470782,470889..471078,472218..472306,478578..478670,478794..478985,479552..479653,479744..479844,480006..480141)
location: region:459843-480141:1
so has part: feature:459843-459959:1:exon
so has part: feature:460082-460137:1:exon
so has part: feature:460222-460390:1:exon
so has part: feature:460477-460611:1:exon
so has part: feature:461171-461277:1:exon
so has part: feature:461492-461582:1:exon
so has part: feature:462264-462396:1:exon
so has part: feature:463934-464031:1:exon
so has part: feature:464126-464272:1:exon
so has part: feature:464384-464560:1:exon
so has part: feature:464670-464774:1:exon
so has part: feature:464861-464941:1:exon
so has part: feature:465276-465431:1:exon
so has part: feature:467175-467340:1:exon
so has part: feature:467552-467748:1:exon
so has part: feature:469644-469708:1:exon
so has part: feature:469908-470103:1:exon
so has part: feature:470708-470782:1:exon
so has part: feature:470889-471078:1:exon
so has part: feature:472218-472306:1:exon
so has part: feature:478578-478670:1:exon
so has part: feature:478794-478985:1:exon
so has part: feature:479552-479653:1:exon
so has part: feature:479744-479844:1:exon
so has part: feature:480006-480141:1:exon

XP_008771907.1
type: Protein
SIO_000068: ncbiprotein

position:480141:1
position: 480141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459843-459959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460082-460137:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460222-460390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460477-460611:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:461171-461277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461492-461582:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462264-462396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:463934-464031:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464126-464272:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:464384-464560:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:464670-464774:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:464861-464941:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:465276-465431:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:467175-467340:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:467552-467748:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:469644-469708:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:469908-470103:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:470708-470782:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:470889-471078:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:472218-472306:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:478578-478670:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:478794-478985:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:479552-479653:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:479744-479844:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:480006-480141:1:exon

LOC103694550
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 506962..510756
location: region:506962-510756:1
so has part: feature:506962-510756:1:exon
subclass of: SO_0000010

103694550
type: Gene
SIO_000068: ncbigene

9125655
type: RGD
SIO_000068: rgd

position:506962:1
position: 506962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510756:1
position: 510756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506962-510756:1:exon

LOC103694550
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: LOC103694550
product: sex-determining region Y protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008773684.3
SIO_010081: LOC103694550
subclass of: SO_0000673
so part of: LOC103694550
location: 506962..510756
location: region:506962-510756:1
so has part: feature:506962-510756:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:506962-510756:1:exon

LOC103694550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: LOC103694550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sex-determining region Y protein-like
translation: MEGHVKRPMNAFMVWSRGERRKLAQQNPSMQNSEISKQLGYQWKSLTEAEKRPFFQEAQRLKTLHREKYPNYKYQTHRRVKVPQRSYTLQREVASTKLYNLLQWDNNLHTIIYGQDWARAAHQSSKNQKSIYLQPVDIPTGYPLQQKQQHQQQQHVHLQQQQQQQQHQFH
SIO_010081: LOC103694550
subclass of: SO_0000673
so part of: LOC103694550
location: 507906..508418
location: region:507906-508418:1
so has part: feature:507906-508418:1:exon

XP_008771906.1
type: Protein
SIO_000068: ncbiprotein

position:507906:1
position: 507906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508418:1
position: 508418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507906-508418:1:exon

LOC120099586
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 513919..514939
location: region:513919-514939:1
so has part: feature:513919-514939:1:exon

120099586
type: Gene
SIO_000068: ncbigene

position:513919:1
position: 513919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514939:1
position: 514939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513919-514939:1:exon

LOC120099586
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099586
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120099586
subclass of: SO_0000673
so part of: LOC120099586
location: 513919..514939
location: region:513919-514939:1
so has part: feature:513919-514939:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:513919-514939:1:exon

Kdm5d
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: Kdm5d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 527069..624019
location: region:527069-624019:1
so has part: feature:527069-624019:1:exon
subclass of: SO_0000010

100312983
type: Gene
SIO_000068: ncbigene

2314436
type: RGD
SIO_000068: rgd

position:527069:1
position: 527069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624019:1
position: 624019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527069-624019:1:exon

Kdm5d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Kdm5d
product: lysine demethylase 5D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_008773688.3
SIO_010081: Kdm5d
subclass of: SO_0000673
so part of: Kdm5d
location: join(527069..527226,527900..528033,530397..530474,535828..535880,540708..541085,542108..542185,543185..543307,543540..543710,544195..544329,558343..558481,558553..558746,563829..563987,567093..567212,567297..567455,597089..597270,597358..597520,607294..607413,607538..607732,608006..608187,608266..608390,608529..608676,617074..617170,617981..618339,619872..620010,620856..621035,621174..621311,621494..622090,622510..622591,622721..622920,623016..624019)
location: region:527069-624019:1
so has part: feature:527069-527226:1:exon
so has part: feature:527900-528033:1:exon
so has part: feature:530397-530474:1:exon
so has part: feature:535828-535880:1:exon
so has part: feature:540708-541085:1:exon
so has part: feature:542108-542185:1:exon
so has part: feature:543185-543307:1:exon
so has part: feature:543540-543710:1:exon
so has part: feature:544195-544329:1:exon
so has part: feature:558343-558481:1:exon
so has part: feature:558553-558746:1:exon
so has part: feature:563829-563987:1:exon
so has part: feature:567093-567212:1:exon
so has part: feature:567297-567455:1:exon
so has part: feature:597089-597270:1:exon
so has part: feature:597358-597520:1:exon
so has part: feature:607294-607413:1:exon
so has part: feature:607538-607732:1:exon
so has part: feature:608006-608187:1:exon
so has part: feature:608266-608390:1:exon
so has part: feature:608529-608676:1:exon
so has part: feature:617074-617170:1:exon
so has part: feature:617981-618339:1:exon
so has part: feature:619872-620010:1:exon
so has part: feature:620856-621035:1:exon
so has part: feature:621174-621311:1:exon
so has part: feature:621494-622090:1:exon
so has part: feature:622510-622591:1:exon
so has part: feature:622721-622920:1:exon
so has part: feature:623016-624019:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527069-527226:1:exon

position:527226:1
position: 527226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:527900-528033:1:exon

position:527900:1
position: 527900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528033:1
position: 528033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:530397-530474:1:exon

position:530397:1
position: 530397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530474:1
position: 530474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:535828-535880:1:exon

position:535828:1
position: 535828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535880:1
position: 535880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:540708-541085:1:exon

position:540708:1
position: 540708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541085:1
position: 541085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:542108-542185:1:exon

position:542108:1
position: 542108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542185:1
position: 542185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:543185-543307:1:exon

position:543185:1
position: 543185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543307:1
position: 543307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:543540-543710:1:exon

position:543540:1
position: 543540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543710:1
position: 543710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:544195-544329:1:exon

position:544195:1
position: 544195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544329:1
position: 544329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:558343-558481:1:exon

position:558343:1
position: 558343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558481:1
position: 558481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:558553-558746:1:exon

position:558553:1
position: 558553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558746:1
position: 558746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:563829-563987:1:exon

position:563829:1
position: 563829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563987:1
position: 563987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:567093-567212:1:exon

position:567093:1
position: 567093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567212:1
position: 567212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:567297-567455:1:exon

position:567297:1
position: 567297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567455:1
position: 567455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:597089-597270:1:exon

position:597089:1
position: 597089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597270:1
position: 597270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:597358-597520:1:exon

position:597358:1
position: 597358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597520:1
position: 597520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:607294-607413:1:exon

position:607294:1
position: 607294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607413:1
position: 607413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:607538-607732:1:exon

position:607538:1
position: 607538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607732:1
position: 607732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:608006-608187:1:exon

position:608006:1
position: 608006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608187:1
position: 608187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:608266-608390:1:exon

position:608266:1
position: 608266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608390:1
position: 608390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:608529-608676:1:exon

position:608529:1
position: 608529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608676:1
position: 608676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:617074-617170:1:exon

position:617074:1
position: 617074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617170:1
position: 617170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:617981-618339:1:exon

position:617981:1
position: 617981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618339:1
position: 618339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:619872-620010:1:exon

position:619872:1
position: 619872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620010:1
position: 620010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:620856-621035:1:exon

position:620856:1
position: 620856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621035:1
position: 621035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:621174-621311:1:exon

position:621174:1
position: 621174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621311:1
position: 621311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:621494-622090:1:exon

position:621494:1
position: 621494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622090:1
position: 622090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:622510-622591:1:exon

position:622510:1
position: 622510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622591:1
position: 622591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:622721-622920:1:exon

position:622721:1
position: 622721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622920:1
position: 622920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:623016-624019:1:exon

position:623016:1
position: 623016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Kdm5d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Kdm5d
product: lysine demethylase 5D, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_008773689.3
SIO_010081: Kdm5d
subclass of: SO_0000673
so part of: Kdm5d
location: join(527900..528033,530397..530474,535828..535880,540708..541085,542108..542185,543185..543307,543540..543710,544195..544329,558343..558481,558583..558746,563829..563987,567093..567212,567297..567455,597089..597270,597358..597520,607294..607413,607538..607732,608006..608187,608266..608390,608529..608676,617074..617170,617981..618339,619872..620010,620856..621035,621174..621311,621494..622090,622510..622591,622721..622920,623016..624019)
location: region:527900-624019:1
so has part: feature:527900-528033:1:exon
so has part: feature:530397-530474:1:exon
so has part: feature:535828-535880:1:exon
so has part: feature:540708-541085:1:exon
so has part: feature:542108-542185:1:exon
so has part: feature:543185-543307:1:exon
so has part: feature:543540-543710:1:exon
so has part: feature:544195-544329:1:exon
so has part: feature:558343-558481:1:exon
so has part: feature:558583-558746:1:exon
so has part: feature:563829-563987:1:exon
so has part: feature:567093-567212:1:exon
so has part: feature:567297-567455:1:exon
so has part: feature:597089-597270:1:exon
so has part: feature:597358-597520:1:exon
so has part: feature:607294-607413:1:exon
so has part: feature:607538-607732:1:exon
so has part: feature:608006-608187:1:exon
so has part: feature:608266-608390:1:exon
so has part: feature:608529-608676:1:exon
so has part: feature:617074-617170:1:exon
so has part: feature:617981-618339:1:exon
so has part: feature:619872-620010:1:exon
so has part: feature:620856-621035:1:exon
so has part: feature:621174-621311:1:exon
so has part: feature:621494-622090:1:exon
so has part: feature:622510-622591:1:exon
so has part: feature:622721-622920:1:exon
so has part: feature:623016-624019:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527900-528033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:530397-530474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535828-535880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:540708-541085:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542108-542185:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543185-543307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543540-543710:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:544195-544329:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:558343-558481:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:558583-558746:1:exon

position:558583:1
position: 558583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:563829-563987:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:567093-567212:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:567297-567455:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:597089-597270:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:597358-597520:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:607294-607413:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:607538-607732:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:608006-608187:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:608266-608390:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:608529-608676:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:617074-617170:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:617981-618339:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:619872-620010:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:620856-621035:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:621174-621311:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:621494-622090:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:622510-622591:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:622721-622920:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:623016-624019:1:exon

Kdm5d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Kdm5d
product: lysine demethylase 5D, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_039100688.1
SIO_010081: Kdm5d
subclass of: SO_0000673
so part of: Kdm5d
location: join(527900..528033,530397..530474,535828..535880,540708..541085,542108..542185,543185..543307,543540..543710,544195..544329,558343..558481,558553..558746,563829..563987,567093..567212,567297..567455,597089..597270,597358..597520,607294..607413,607538..607732,607899..608066)
location: region:527900-608066:1
so has part: feature:527900-528033:1:exon
so has part: feature:530397-530474:1:exon
so has part: feature:535828-535880:1:exon
so has part: feature:540708-541085:1:exon
so has part: feature:542108-542185:1:exon
so has part: feature:543185-543307:1:exon
so has part: feature:543540-543710:1:exon
so has part: feature:544195-544329:1:exon
so has part: feature:558343-558481:1:exon
so has part: feature:558553-558746:1:exon
so has part: feature:563829-563987:1:exon
so has part: feature:567093-567212:1:exon
so has part: feature:567297-567455:1:exon
so has part: feature:597089-597270:1:exon
so has part: feature:597358-597520:1:exon
so has part: feature:607294-607413:1:exon
so has part: feature:607538-607732:1:exon
so has part: feature:607899-608066:1:exon

position:608066:1
position: 608066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527900-528033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:530397-530474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535828-535880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:540708-541085:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542108-542185:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543185-543307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543540-543710:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:544195-544329:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:558343-558481:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:558553-558746:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:563829-563987:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:567093-567212:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:567297-567455:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:597089-597270:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:597358-597520:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:607294-607413:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:607538-607732:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:607899-608066:1:exon

position:607899:1
position: 607899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Kdm5d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Kdm5d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 5D isoform X1
translation: MKPESDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEIDNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERKILDLYSLNKIVIEEGGYEAICKDRRWARVAQRLNYPSGKNIGSLLRSHYERIIYPYEMFQSGANHVQCNTDPFDSEEKDKEYKPHSIPLRQSVQPLKFSCYSRRAKRLQPEPEPTEEDIEKNPELKKLQIYGAGPKMIGLGLMAKEKTLRKKGSIQPVCFPLLLMLLDKEEVTCPATVIVKGEASGFGKVTSAFSDKNLNHNFKPCTEMTTQLRNNHSNTQFMDSYVCRICSRGDEDDRFLLCVGCNDNYHIFCLLPPLSEVPKGVWRCPKCILAECKRPLEAFGFEQATQEYTLQSFGEMADSFKADYFNMPVHMVPTEVVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNSKWTLSPEEKEYAASGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEDVMKTLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLRKTLLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSRSRQYLRYRYTLDELPAMLQKLKIRAESFDNWANKVQAALEVEDGRKRSFEELRALETEAHDRQFPNNDLLQRLKKCLTEAEACISQVLELVNNSEDRLETPQLTLTELQILLKQMCTLPCTIHQIDEVKDVLQQVETYQIETREALTSLPYSLEILQSLMEKGQQLRVEVPEAHQLEELLEQAQWLDQVKQALAPSGQKHSLVIMKKLLVMGTKLASSPSVNKARAELQELLTIAERWEEKALFCLDASQKHSPATLEVIIREAENIPVYLPNIQSLKEALTKAQAWIADVNEIQNGDHYPCLDDLEGLVAVGRDLPVELEELKQLENQVLTAHSWKEKASKTFLKKNSCYTLLEVLCPCADAGSVSTKRSRWIEKEMGLYKYDTELLGLSAQDLRDPGSVIMAFKEGEEKEKEGILHLRHINSTKPSPMSSSINASATSICICGQVRAGVEALRCDLCHDWFHGQCVTVPHLLSSLRASHTSSQLLAWWEWDTKFLCPLCMRSRRPRLETILSLLVGLQRLSVRLPEGEALQCLTERAIGWQGRARQALASENVTALLKQLAKSRQQLQDELRHEKPPTSHSGLPSECLTEDSDKDILKEEEELVLNEDMLKNSEKIVPKESSCERGEELLPSLLSQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQNPNLERIHTLLELEKPEDPKNWSEEQTPERRQRRRQKVVLSRKGEDLTQKELASKRARSSRIKPKGKQFQEPIHGDNVLLSHHTEHTNILKGNMNSVQGKDPSPSSTFPSLPPLLHLSYFHQQKLQQ
SIO_010081: Kdm5d
subclass of: SO_0000673
so part of: Kdm5d
location: join(540936..541085,542108..542185,543185..543307,543540..543710,544195..544329,558343..558481,558553..558746,563829..563987,567093..567212,567297..567455,597089..597270,597358..597520,607294..607413,607538..607732,608006..608187,608266..608390,608529..608676,617074..617170,617981..618339,619872..620010,620856..621035,621174..621311,621494..622090,622510..622591,622721..622920,623016..623363)
location: region:540936-623363:1
so has part: feature:540936-541085:1:exon
so has part: feature:542108-542185:1:exon
so has part: feature:543185-543307:1:exon
so has part: feature:543540-543710:1:exon
so has part: feature:544195-544329:1:exon
so has part: feature:558343-558481:1:exon
so has part: feature:558553-558746:1:exon
so has part: feature:563829-563987:1:exon
so has part: feature:567093-567212:1:exon
so has part: feature:567297-567455:1:exon
so has part: feature:597089-597270:1:exon
so has part: feature:597358-597520:1:exon
so has part: feature:607294-607413:1:exon
so has part: feature:607538-607732:1:exon
so has part: feature:608006-608187:1:exon
so has part: feature:608266-608390:1:exon
so has part: feature:608529-608676:1:exon
so has part: feature:617074-617170:1:exon
so has part: feature:617981-618339:1:exon
so has part: feature:619872-620010:1:exon
so has part: feature:620856-621035:1:exon
so has part: feature:621174-621311:1:exon
so has part: feature:621494-622090:1:exon
so has part: feature:622510-622591:1:exon
so has part: feature:622721-622920:1:exon
so has part: feature:623016-623363:1:exon

XP_008771910.1
type: Protein
SIO_000068: ncbiprotein

position:540936:1
position: 540936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623363:1
position: 623363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540936-541085:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542108-542185:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543185-543307:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543540-543710:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544195-544329:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558343-558481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:558553-558746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:563829-563987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:567093-567212:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:567297-567455:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:597089-597270:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:597358-597520:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:607294-607413:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:607538-607732:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:608006-608187:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:608266-608390:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:608529-608676:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:617074-617170:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:617981-618339:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:619872-620010:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:620856-621035:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:621174-621311:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:621494-622090:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:622510-622591:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:622721-622920:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:623016-623363:1:exon

Kdm5d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Kdm5d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 5D isoform X2
translation: MKPESDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEIDNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERKILDLYSLNKIVIEEGGYEAICKDRRWARVAQRLNYPSGKNIGSLLRSHYERIIYPYEMFQSGANHVQCNTDPFDSEEKDKEYKPHSIPLRQSVQPLKFSCYSRRAKRLQPEPEPTEEDIEKNPELKKLQIYGAGPKMIGLGLMAKEKTLRKKGSIQPDKEEVTCPATVIVKGEASGFGKVTSAFSDKNLNHNFKPCTEMTTQLRNNHSNTQFMDSYVCRICSRGDEDDRFLLCVGCNDNYHIFCLLPPLSEVPKGVWRCPKCILAECKRPLEAFGFEQATQEYTLQSFGEMADSFKADYFNMPVHMVPTEVVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNSKWTLSPEEKEYAASGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEDVMKTLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLRKTLLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSRSRQYLRYRYTLDELPAMLQKLKIRAESFDNWANKVQAALEVEDGRKRSFEELRALETEAHDRQFPNNDLLQRLKKCLTEAEACISQVLELVNNSEDRLETPQLTLTELQILLKQMCTLPCTIHQIDEVKDVLQQVETYQIETREALTSLPYSLEILQSLMEKGQQLRVEVPEAHQLEELLEQAQWLDQVKQALAPSGQKHSLVIMKKLLVMGTKLASSPSVNKARAELQELLTIAERWEEKALFCLDASQKHSPATLEVIIREAENIPVYLPNIQSLKEALTKAQAWIADVNEIQNGDHYPCLDDLEGLVAVGRDLPVELEELKQLENQVLTAHSWKEKASKTFLKKNSCYTLLEVLCPCADAGSVSTKRSRWIEKEMGLYKYDTELLGLSAQDLRDPGSVIMAFKEGEEKEKEGILHLRHINSTKPSPMSSSINASATSICICGQVRAGVEALRCDLCHDWFHGQCVTVPHLLSSLRASHTSSQLLAWWEWDTKFLCPLCMRSRRPRLETILSLLVGLQRLSVRLPEGEALQCLTERAIGWQGRARQALASENVTALLKQLAKSRQQLQDELRHEKPPTSHSGLPSECLTEDSDKDILKEEEELVLNEDMLKNSEKIVPKESSCERGEELLPSLLSQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQNPNLERIHTLLELEKPEDPKNWSEEQTPERRQRRRQKVVLSRKGEDLTQKELASKRARSSRIKPKGKQFQEPIHGDNVLLSHHTEHTNILKGNMNSVQGKDPSPSSTFPSLPPLLHLSYFHQQKLQQ
SIO_010081: Kdm5d
subclass of: SO_0000673
so part of: Kdm5d
location: join(540936..541085,542108..542185,543185..543307,543540..543710,544195..544329,558343..558481,558583..558746,563829..563987,567093..567212,567297..567455,597089..597270,597358..597520,607294..607413,607538..607732,608006..608187,608266..608390,608529..608676,617074..617170,617981..618339,619872..620010,620856..621035,621174..621311,621494..622090,622510..622591,622721..622920,623016..623363)
location: region:540936-623363:1
so has part: feature:540936-541085:1:exon
so has part: feature:542108-542185:1:exon
so has part: feature:543185-543307:1:exon
so has part: feature:543540-543710:1:exon
so has part: feature:544195-544329:1:exon
so has part: feature:558343-558481:1:exon
so has part: feature:558583-558746:1:exon
so has part: feature:563829-563987:1:exon
so has part: feature:567093-567212:1:exon
so has part: feature:567297-567455:1:exon
so has part: feature:597089-597270:1:exon
so has part: feature:597358-597520:1:exon
so has part: feature:607294-607413:1:exon
so has part: feature:607538-607732:1:exon
so has part: feature:608006-608187:1:exon
so has part: feature:608266-608390:1:exon
so has part: feature:608529-608676:1:exon
so has part: feature:617074-617170:1:exon
so has part: feature:617981-618339:1:exon
so has part: feature:619872-620010:1:exon
so has part: feature:620856-621035:1:exon
so has part: feature:621174-621311:1:exon
so has part: feature:621494-622090:1:exon
so has part: feature:622510-622591:1:exon
so has part: feature:622721-622920:1:exon
so has part: feature:623016-623363:1:exon

XP_008771911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540936-541085:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542108-542185:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543185-543307:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543540-543710:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544195-544329:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558343-558481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:558583-558746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:563829-563987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:567093-567212:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:567297-567455:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:597089-597270:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:597358-597520:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:607294-607413:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:607538-607732:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:608006-608187:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:608266-608390:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:608529-608676:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:617074-617170:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:617981-618339:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:619872-620010:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:620856-621035:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:621174-621311:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:621494-622090:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:622510-622591:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:622721-622920:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:623016-623363:1:exon

Kdm5d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Kdm5d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 5D isoform X5
translation: MKPESDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEIDNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERKILDLYSLNKIVIEEGGYEAICKDRRWARVAQRLNYPSGKNIGSLLRSHYERIIYPYEMFQSGANHVQCNTDPFDSEEKDKEYKPHSIPLRQSVQPLKFSCYSRRAKRLQPEPEPTEEDIEKNPELKKLQIYGAGPKMIGLGLMAKEKTLRKKGSIQPVCFPLLLMLLDKEEVTCPATVIVKGEASGFGKVTSAFSDKNLNHNFKPCTEMTTQLRNNHSNTQFMDSYVCRICSRGDEDDRFLLCVGCNDNYHIFCLLPPLSEVPKGVWRCPKCILAECKRPLEAFGFEQATQEYTLQSFGEMADSFKADYFNMPVHMVPTEVVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNSKWTLSPEEKEYAASGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEDVMKTLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLRKTLLEKLSLQA
SIO_010081: Kdm5d
subclass of: SO_0000673
so part of: Kdm5d
location: join(540936..541085,542108..542185,543185..543307,543540..543710,544195..544329,558343..558481,558553..558746,563829..563987,567093..567212,567297..567455,597089..597270,597358..597520,607294..607413,607538..607732,607899..607916)
location: region:540936-607916:1
so has part: feature:540936-541085:1:exon
so has part: feature:542108-542185:1:exon
so has part: feature:543185-543307:1:exon
so has part: feature:543540-543710:1:exon
so has part: feature:544195-544329:1:exon
so has part: feature:558343-558481:1:exon
so has part: feature:558553-558746:1:exon
so has part: feature:563829-563987:1:exon
so has part: feature:567093-567212:1:exon
so has part: feature:567297-567455:1:exon
so has part: feature:597089-597270:1:exon
so has part: feature:597358-597520:1:exon
so has part: feature:607294-607413:1:exon
so has part: feature:607538-607732:1:exon
so has part: feature:607899-607916:1:exon

XP_038956616.1
type: Protein
SIO_000068: ncbiprotein

position:607916:1
position: 607916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540936-541085:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542108-542185:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543185-543307:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543540-543710:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544195-544329:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558343-558481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:558553-558746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:563829-563987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:567093-567212:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:567297-567455:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:597089-597270:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:597358-597520:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:607294-607413:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:607538-607732:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:607899-607916:1:exon

Kdm5d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Kdm5d
product: lysine demethylase 5D, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_039100686.1
SIO_010081: Kdm5d
subclass of: SO_0000673
so part of: Kdm5d
location: join(555308..557415,558343..558481,558553..558746,563829..563987,567093..567212,567297..567455,597089..597270,597358..597520,607294..607413,607538..607732,608006..608187,608266..608390,608529..608676,617074..617170,617981..618339,619872..620010,620856..621035,621174..621311,621494..622090,622510..622591,622721..622920,623016..624019)
location: region:555308-624019:1
so has part: feature:555308-557415:1:exon
so has part: feature:558343-558481:1:exon
so has part: feature:558553-558746:1:exon
so has part: feature:563829-563987:1:exon
so has part: feature:567093-567212:1:exon
so has part: feature:567297-567455:1:exon
so has part: feature:597089-597270:1:exon
so has part: feature:597358-597520:1:exon
so has part: feature:607294-607413:1:exon
so has part: feature:607538-607732:1:exon
so has part: feature:608006-608187:1:exon
so has part: feature:608266-608390:1:exon
so has part: feature:608529-608676:1:exon
so has part: feature:617074-617170:1:exon
so has part: feature:617981-618339:1:exon
so has part: feature:619872-620010:1:exon
so has part: feature:620856-621035:1:exon
so has part: feature:621174-621311:1:exon
so has part: feature:621494-622090:1:exon
so has part: feature:622510-622591:1:exon
so has part: feature:622721-622920:1:exon
so has part: feature:623016-624019:1:exon

position:555308:1
position: 555308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555308-557415:1:exon

position:557415:1
position: 557415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:558343-558481:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558553-558746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563829-563987:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:567093-567212:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567297-567455:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:597089-597270:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597358-597520:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607294-607413:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:607538-607732:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:608006-608187:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:608266-608390:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:608529-608676:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:617074-617170:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:617981-618339:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:619872-620010:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:620856-621035:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:621174-621311:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621494-622090:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:622510-622591:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:622721-622920:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:623016-624019:1:exon

Kdm5d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Kdm5d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 5D isoform X3
translation: MKTKMDIFYISVHLLHKCRGHLTGFTFLKSLIIQGRRVMFLMPEPTEEDIEKNPELKKLQIYGAGPKMIGLGLMAKEKTLRKKGSIQPVCFPLLLMLLDKEEVTCPATVIVKGEASGFGKVTSAFSDKNLNHNFKPCTEMTTQLRNNHSNTQFMDSYVCRICSRGDEDDRFLLCVGCNDNYHIFCLLPPLSEVPKGVWRCPKCILAECKRPLEAFGFEQATQEYTLQSFGEMADSFKADYFNMPVHMVPTEVVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNSKWTLSPEEKEYAASGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEDVMKTLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLRKTLLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSRSRQYLRYRYTLDELPAMLQKLKIRAESFDNWANKVQAALEVEDGRKRSFEELRALETEAHDRQFPNNDLLQRLKKCLTEAEACISQVLELVNNSEDRLETPQLTLTELQILLKQMCTLPCTIHQIDEVKDVLQQVETYQIETREALTSLPYSLEILQSLMEKGQQLRVEVPEAHQLEELLEQAQWLDQVKQALAPSGQKHSLVIMKKLLVMGTKLASSPSVNKARAELQELLTIAERWEEKALFCLDASQKHSPATLEVIIREAENIPVYLPNIQSLKEALTKAQAWIADVNEIQNGDHYPCLDDLEGLVAVGRDLPVELEELKQLENQVLTAHSWKEKASKTFLKKNSCYTLLEVLCPCADAGSVSTKRSRWIEKEMGLYKYDTELLGLSAQDLRDPGSVIMAFKEGEEKEKEGILHLRHINSTKPSPMSSSINASATSICICGQVRAGVEALRCDLCHDWFHGQCVTVPHLLSSLRASHTSSQLLAWWEWDTKFLCPLCMRSRRPRLETILSLLVGLQRLSVRLPEGEALQCLTERAIGWQGRARQALASENVTALLKQLAKSRQQLQDELRHEKPPTSHSGLPSECLTEDSDKDILKEEEELVLNEDMLKNSEKIVPKESSCERGEELLPSLLSQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQNPNLERIHTLLELEKPEDPKNWSEEQTPERRQRRRQKVVLSRKGEDLTQKELASKRARSSRIKPKGKQFQEPIHGDNVLLSHHTEHTNILKGNMNSVQGKDPSPSSTFPSLPPLLHLSYFHQQKLQQ
SIO_010081: Kdm5d
subclass of: SO_0000673
so part of: Kdm5d
location: join(557290..557415,558343..558481,558553..558746,563829..563987,567093..567212,567297..567455,597089..597270,597358..597520,607294..607413,607538..607732,608006..608187,608266..608390,608529..608676,617074..617170,617981..618339,619872..620010,620856..621035,621174..621311,621494..622090,622510..622591,622721..622920,623016..623363)
location: region:557290-623363:1
so has part: feature:557290-557415:1:exon
so has part: feature:558343-558481:1:exon
so has part: feature:558553-558746:1:exon
so has part: feature:563829-563987:1:exon
so has part: feature:567093-567212:1:exon
so has part: feature:567297-567455:1:exon
so has part: feature:597089-597270:1:exon
so has part: feature:597358-597520:1:exon
so has part: feature:607294-607413:1:exon
so has part: feature:607538-607732:1:exon
so has part: feature:608006-608187:1:exon
so has part: feature:608266-608390:1:exon
so has part: feature:608529-608676:1:exon
so has part: feature:617074-617170:1:exon
so has part: feature:617981-618339:1:exon
so has part: feature:619872-620010:1:exon
so has part: feature:620856-621035:1:exon
so has part: feature:621174-621311:1:exon
so has part: feature:621494-622090:1:exon
so has part: feature:622510-622591:1:exon
so has part: feature:622721-622920:1:exon
so has part: feature:623016-623363:1:exon

XP_038956614.1
type: Protein
SIO_000068: ncbiprotein

position:557290:1
position: 557290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557290-557415:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558343-558481:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558553-558746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563829-563987:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:567093-567212:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567297-567455:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:597089-597270:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597358-597520:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607294-607413:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:607538-607732:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:608006-608187:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:608266-608390:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:608529-608676:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:617074-617170:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:617981-618339:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:619872-620010:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:620856-621035:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:621174-621311:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621494-622090:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:622510-622591:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:622721-622920:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:623016-623363:1:exon

LOC103694552
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694552
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(583178..590437)
location: region:583178-590437:-1
so has part: feature:583178-590437:-1:exon
subclass of: SO_0000010

103694552
type: Gene
SIO_000068: ncbigene

9439292
type: RGD
SIO_000068: rgd

position:583178:-1
position: 583178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590437:-1
position: 590437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583178-590437:-1:exon

LOC103694552
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: LOC103694552
product: sex-determining region Y protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008773686.3
SIO_010081: LOC103694552
subclass of: SO_0000673
so part of: LOC103694552
location: complement(583178..590437)
location: region:583178-590437:-1
so has part: feature:583178-590437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:583178-590437:-1:exon

LOC103694552
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: LOC103694552
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sex-determining region Y protein
translation: MEGQVKRPMNAFMVWSRGERHKLAQQNPSMQNSEISKQLGYQWKSLTEAEKRPFFQEAQRLKTLHREKYPNYKYQPHRRVKVPQRSYTLQREVASTKLYNLLQWDNNLHTIIYGQDWARAAHQSSKNQKSIYLQPVDIPTGYPLQQKQQQQQHQFH
SIO_010081: LOC103694552
subclass of: SO_0000673
so part of: LOC103694552
location: complement(584765..585235)
location: region:584765-585235:-1
so has part: feature:584765-585235:-1:exon

XP_008771908.1
type: Protein
SIO_000068: ncbiprotein

position:584765:-1
position: 584765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585235:-1
position: 585235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584765-585235:-1:exon

Kdm5d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Kdm5d
product: lysine demethylase 5D, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_039100687.1
SIO_010081: Kdm5d
subclass of: SO_0000673
so part of: Kdm5d
location: join(607591..607732,607899..608187,608266..608390,608529..608676,617074..617170,617981..618339,619872..620010,620856..621035,621174..621311,621494..622090,622510..622591,622721..622920,623016..624019)
location: region:607591-624019:1
so has part: feature:607591-607732:1:exon
so has part: feature:607899-608187:1:exon
so has part: feature:608266-608390:1:exon
so has part: feature:608529-608676:1:exon
so has part: feature:617074-617170:1:exon
so has part: feature:617981-618339:1:exon
so has part: feature:619872-620010:1:exon
so has part: feature:620856-621035:1:exon
so has part: feature:621174-621311:1:exon
so has part: feature:621494-622090:1:exon
so has part: feature:622510-622591:1:exon
so has part: feature:622721-622920:1:exon
so has part: feature:623016-624019:1:exon

position:607591:1
position: 607591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607591-607732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:607899-608187:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608266-608390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608529-608676:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617074-617170:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617981-618339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:619872-620010:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:620856-621035:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:621174-621311:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:621494-622090:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:622510-622591:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:622721-622920:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623016-624019:1:exon

Kdm5d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Kdm5d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 5D isoform X4
translation: MWVEHPQGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSRSRQYLRYRYTLDELPAMLQKLKIRAESFDNWANKVQAALEVEDGRKRSFEELRALETEAHDRQFPNNDLLQRLKKCLTEAEACISQVLELVNNSEDRLETPQLTLTELQILLKQMCTLPCTIHQIDEVKDVLQQVETYQIETREALTSLPYSLEILQSLMEKGQQLRVEVPEAHQLEELLEQAQWLDQVKQALAPSGQKHSLVIMKKLLVMGTKLASSPSVNKARAELQELLTIAERWEEKALFCLDASQKHSPATLEVIIREAENIPVYLPNIQSLKEALTKAQAWIADVNEIQNGDHYPCLDDLEGLVAVGRDLPVELEELKQLENQVLTAHSWKEKASKTFLKKNSCYTLLEVLCPCADAGSVSTKRSRWIEKEMGLYKYDTELLGLSAQDLRDPGSVIMAFKEGEEKEKEGILHLRHINSTKPSPMSSSINASATSICICGQVRAGVEALRCDLCHDWFHGQCVTVPHLLSSLRASHTSSQLLAWWEWDTKFLCPLCMRSRRPRLETILSLLVGLQRLSVRLPEGEALQCLTERAIGWQGRARQALASENVTALLKQLAKSRQQLQDELRHEKPPTSHSGLPSECLTEDSDKDILKEEEELVLNEDMLKNSEKIVPKESSCERGEELLPSLLSQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQNPNLERIHTLLELEKPEDPKNWSEEQTPERRQRRRQKVVLSRKGEDLTQKELASKRARSSRIKPKGKQFQEPIHGDNVLLSHHTEHTNILKGNMNSVQGKDPSPSSTFPSLPPLLHLSYFHQQKLQQ
SIO_010081: Kdm5d
subclass of: SO_0000673
so part of: Kdm5d
location: join(607985..608187,608266..608390,608529..608676,617074..617170,617981..618339,619872..620010,620856..621035,621174..621311,621494..622090,622510..622591,622721..622920,623016..623363)
location: region:607985-623363:1
so has part: feature:607985-608187:1:exon
so has part: feature:608266-608390:1:exon
so has part: feature:608529-608676:1:exon
so has part: feature:617074-617170:1:exon
so has part: feature:617981-618339:1:exon
so has part: feature:619872-620010:1:exon
so has part: feature:620856-621035:1:exon
so has part: feature:621174-621311:1:exon
so has part: feature:621494-622090:1:exon
so has part: feature:622510-622591:1:exon
so has part: feature:622721-622920:1:exon
so has part: feature:623016-623363:1:exon

XP_038956615.1
type: Protein
SIO_000068: ncbiprotein

position:607985:1
position: 607985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607985-608187:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:608266-608390:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608529-608676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617074-617170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617981-618339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:619872-620010:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620856-621035:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:621174-621311:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:621494-622090:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:622510-622591:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:622721-622920:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:623016-623363:1:exon

LOC103694551
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(647886..652607)
location: region:647886-652607:-1
so has part: feature:647886-652607:-1:exon
subclass of: SO_0000011

103694551
type: Gene
SIO_000068: ncbigene

9216296
type: RGD
SIO_000068: rgd

position:647886:-1
position: 647886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652607:-1
position: 652607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647886-652607:-1:exon

LOC103694551
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694551
product: uncharacterized LOC103694551
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_597831.3
SIO_010081: LOC103694551
subclass of: SO_0000673
so part of: LOC103694551
location: complement(join(647886..648724,651105..651238,651912..652607))
location: region:647886-652607:-1
so has part: feature:651912-652607:-1:exon
so has part: feature:651105-651238:-1:exon
so has part: feature:647886-648724:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:651912-652607:-1:exon

position:651912:-1
position: 651912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:651105-651238:-1:exon

position:651105:-1
position: 651105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651238:-1
position: 651238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:647886-648724:-1:exon

position:648724:-1
position: 648724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120099580
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(664106..762627)
location: region:664106-762627:-1
so has part: feature:664106-762627:-1:exon
subclass of: SO_0000011

120099580
type: Gene
SIO_000068: ncbigene

position:664106:-1
position: 664106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762627:-1
position: 762627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664106-762627:-1:exon

LOC120099580
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC120099580
product: uncharacterized LOC120099580
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_005498705.1
SIO_010081: LOC120099580
subclass of: SO_0000673
so part of: LOC120099580
location: complement(join(664106..664482,760951..761040,761872..762627))
location: region:664106-762627:-1
so has part: feature:761872-762627:-1:exon
so has part: feature:760951-761040:-1:exon
so has part: feature:664106-664482:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:761872-762627:-1:exon

position:761872:-1
position: 761872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:760951-761040:-1:exon

position:760951:-1
position: 760951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761040:-1
position: 761040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:664106-664482:-1:exon

position:664482:-1
position: 664482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120099578
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(664106..665454)
location: region:664106-665454:-1
so has part: feature:664106-665454:-1:exon

120099578
type: Gene
SIO_000068: ncbigene

position:665454:-1
position: 665454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664106-665454:-1:exon

LOC120099578
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099578
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120099578
subclass of: SO_0000673
so part of: LOC120099578
location: complement(664106..665454)
location: region:664106-665454:-1
so has part: feature:664106-665454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:664106-665454:-1:exon

LOC103694571
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(670688..677718)
location: region:670688-677718:-1
so has part: feature:670688-677718:-1:exon

103694571
type: Gene
SIO_000068: ncbigene

9081305
type: RGD
SIO_000068: rgd

position:670688:-1
position: 670688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677718:-1
position: 677718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670688-677718:-1:exon

LOC103694554
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694554
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(678514..680319)
location: region:678514-680319:-1
so has part: feature:678514-680319:-1:exon
subclass of: SO_0000010

103694554
type: Gene
SIO_000068: ncbigene

9120067
type: RGD
SIO_000068: rgd

position:678514:-1
position: 678514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680319:-1
position: 680319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678514-680319:-1:exon

LOC103694554
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: LOC103694554
product: sex-determining region Y protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008773691.3
SIO_010081: LOC103694554
subclass of: SO_0000673
so part of: LOC103694554
location: complement(678514..680319)
location: region:678514-680319:-1
so has part: feature:678514-680319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:678514-680319:-1:exon

LOC103694554
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: LOC103694554
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sex-determining region Y protein-like
translation: MEGHVKRPMNAFMVWSRGERRKLAQQNPSMQNSEISKQLGYQWKSLTEAEKRPFFQEAQRLKTLHREKYPNYKYQTHRRVKVPQRSYTLQREVASTKLYNLLQWDNNLHTIIYGQDWARAAHQSSKNQKSIYLQPVDIPTGYPLQQKQQHQQQQHVHLQQQQQQQHQFH
SIO_010081: LOC103694554
subclass of: SO_0000673
so part of: LOC103694554
location: complement(679687..680196)
location: region:679687-680196:-1
so has part: feature:679687-680196:-1:exon

XP_008771913.2
type: Protein
SIO_000068: ncbiprotein

position:679687:-1
position: 679687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680196:-1
position: 680196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679687-680196:-1:exon

LOC108353315
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC108353315
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 718178..722390
location: region:718178-722390:1
so has part: feature:718178-722390:1:exon

108353315
type: Gene
SIO_000068: ncbigene

11375432
type: RGD
SIO_000068: rgd

position:718178:1
position: 718178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722390:1
position: 722390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718178-722390:1:exon

LOC120099577
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 752856..758993
location: region:752856-758993:1
so has part: feature:752856-758993:1:exon
subclass of: SO_0000010

120099577
type: Gene
SIO_000068: ncbigene

position:752856:1
position: 752856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758993:1
position: 758993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752856-758993:1:exon

LOC120099577
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: LOC120099577
product: sex-determining region Y protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039100659.1
SIO_010081: LOC120099577
subclass of: SO_0000673
so part of: LOC120099577
location: 752856..758993
location: region:752856-758993:1
so has part: feature:752856-758993:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:752856-758993:1:exon

LOC120099577
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: LOC120099577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sex-determining region Y protein-like
translation: MEGHVKRPMNAFMVWSRGERRKLAQQNPSMQNSEISKQLGYQWKSLTEAEKRPFFQEAQRLKTLHREKYPNYKYQTHRRVKVPQRSYTLQREVASTKLYNLLQWDNNLHTIIYGQDWARAAHQSSKNQKSIYLQPVDIPTGYPLQQKQQHQQQQHVHLQQQQQQQHQFH
SIO_010081: LOC120099577
subclass of: SO_0000673
so part of: LOC120099577
location: 754472..754981
location: region:754472-754981:1
so has part: feature:754472-754981:1:exon

XP_038956587.1
type: Protein
SIO_000068: ncbiprotein

position:754472:1
position: 754472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754981:1
position: 754981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754472-754981:1:exon

LOC120099579
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 760495..761508
location: region:760495-761508:1
so has part: feature:760495-761508:1:exon

120099579
type: Gene
SIO_000068: ncbigene

position:760495:1
position: 760495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761508:1
position: 761508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760495-761508:1:exon

LOC120099579
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099579
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120099579
subclass of: SO_0000673
so part of: LOC120099579
location: 760495..761508
location: region:760495-761508:1
so has part: feature:760495-761508:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:760495-761508:1:exon

LOC103694557
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694557
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 786728..809248
location: region:786728-809248:1
so has part: feature:786728-809248:1:exon
subclass of: SO_0000010

103694557
type: Gene
SIO_000068: ncbigene

9252298
type: RGD
SIO_000068: rgd

position:786728:1
position: 786728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809248:1
position: 809248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:786728-809248:1:exon

LOC103694557
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: LOC103694557
product: ubiquitin-like modifier-activating enzyme 1 Y
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_008773693.3
SIO_010081: LOC103694557
subclass of: SO_0000673
so part of: LOC103694557
location: join(786728..786928,788868..788984,789107..789162,789247..789415,789502..789636,790196..790302,790515..790605,791288..791420,792937..793034,793129..793275,793387..793563,793673..793777,793864..793944,794278..794433,796179..796344,796556..796752,798648..798712,798912..799107,799712..799786,799893..800082,801222..801310,807597..807689,807813..808004,808569..808670,808761..808861,809023..809248)
location: region:786728-809248:1
so has part: feature:786728-786928:1:exon
so has part: feature:788868-788984:1:exon
so has part: feature:789107-789162:1:exon
so has part: feature:789247-789415:1:exon
so has part: feature:789502-789636:1:exon
so has part: feature:790196-790302:1:exon
so has part: feature:790515-790605:1:exon
so has part: feature:791288-791420:1:exon
so has part: feature:792937-793034:1:exon
so has part: feature:793129-793275:1:exon
so has part: feature:793387-793563:1:exon
so has part: feature:793673-793777:1:exon
so has part: feature:793864-793944:1:exon
so has part: feature:794278-794433:1:exon
so has part: feature:796179-796344:1:exon
so has part: feature:796556-796752:1:exon
so has part: feature:798648-798712:1:exon
so has part: feature:798912-799107:1:exon
so has part: feature:799712-799786:1:exon
so has part: feature:799893-800082:1:exon
so has part: feature:801222-801310:1:exon
so has part: feature:807597-807689:1:exon
so has part: feature:807813-808004:1:exon
so has part: feature:808569-808670:1:exon
so has part: feature:808761-808861:1:exon
so has part: feature:809023-809248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:786728-786928:1:exon

position:786928:1
position: 786928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:788868-788984:1:exon

position:788868:1
position: 788868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788984:1
position: 788984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:789107-789162:1:exon

position:789107:1
position: 789107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789162:1
position: 789162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:789247-789415:1:exon

position:789247:1
position: 789247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789415:1
position: 789415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:789502-789636:1:exon

position:789502:1
position: 789502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789636:1
position: 789636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:790196-790302:1:exon

position:790196:1
position: 790196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790302:1
position: 790302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:790515-790605:1:exon

position:790515:1
position: 790515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790605:1
position: 790605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:791288-791420:1:exon

position:791288:1
position: 791288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791420:1
position: 791420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:792937-793034:1:exon

position:792937:1
position: 792937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793034:1
position: 793034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:793129-793275:1:exon

position:793129:1
position: 793129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793275:1
position: 793275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:793387-793563:1:exon

position:793387:1
position: 793387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793563:1
position: 793563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:793673-793777:1:exon

position:793673:1
position: 793673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793777:1
position: 793777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:793864-793944:1:exon

position:793864:1
position: 793864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793944:1
position: 793944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:794278-794433:1:exon

position:794278:1
position: 794278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794433:1
position: 794433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:796179-796344:1:exon

position:796179:1
position: 796179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796344:1
position: 796344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:796556-796752:1:exon

position:796556:1
position: 796556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796752:1
position: 796752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:798648-798712:1:exon

position:798648:1
position: 798648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798712:1
position: 798712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:798912-799107:1:exon

position:798912:1
position: 798912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799107:1
position: 799107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:799712-799786:1:exon

position:799712:1
position: 799712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799786:1
position: 799786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:799893-800082:1:exon

position:799893:1
position: 799893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800082:1
position: 800082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:801222-801310:1:exon

position:801222:1
position: 801222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801310:1
position: 801310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:807597-807689:1:exon

position:807597:1
position: 807597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807689:1
position: 807689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:807813-808004:1:exon

position:807813:1
position: 807813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808004:1
position: 808004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:808569-808670:1:exon

position:808569:1
position: 808569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808670:1
position: 808670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:808761-808861:1:exon

position:808761:1
position: 808761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808861:1
position: 808861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:809023-809248:1:exon

position:809023:1
position: 809023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103694557
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: LOC103694557
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-like modifier-activating enzyme 1 Y
translation: MSSSVLSKKRRVSGPDSKVDSSWSSTHSVMFGVPPGPNSGMSKNKEMDIDESLYSRQLYVLGHEAMKHLQTSSVLISGLQGLGVEIAKNIILGGVKAVTLHDQGTAQWADLSSQFYLHEEDIGKNRAEVSQPRLAELNSYVPVHTYTGPLVDDFLSGFQVVVLTNTPLEYQLQVGEFCHSHGIKLVVADTRGLVGQLFCDFGEEMILTDANGEQPLSAMVSMITKENPGIVTCLEETRHGFESGDFVSFTEVQGMSELNGIGPMEIKVLGPYSFSICDTSSFSEYTRGGIVSQVKVSQKISFKSLVASLAEPEFVITDFAKCCRPAQLHIGFQALHQFCTQHSRPPRPHNEEDAAEMVTLAQAVNAQSLPAVQQDCLDIDLIRKLAYVAAGDLAPMSAFIGGLAAQEVMKACSGKFMPIRQWLYFDALECLPEHRVAFMEDKCLPRQNRYDGQVAVFGSDLQEKLGKQKYFLVGAGAIGCELLKNFAMIGLGCGEGGEITVTDMDTIEKSNLNRQFLFRPWDVTKLKSETAAAAVRDINPHIRVCSHQNRVGPETEHVYDDDFFQNLDGVANALDNVDARLYMDRRCVYYRKPLLESGTLGTKGNVQVVVPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQSAENVNQYLMDPKFMERTLQLAGTQPLEVLEAIQCSLVLQRPQTWADCVTWAYQHWHTQYSHNIQQLLHNFPPDQLTSSGVLFWSGPKRCPHPLTFDTNNPLHLDYVMAAANLFAQTYGLEGSQDCAAVTTLLQSLPAPKFAPKSGIRIHVSEQELQSTSATVDDSHLEELKTSLPTPDKMLGFKMHPIDFEKDDDSNFHMDFIVAASNLRAENYDIPPADRHKSKLIAGKIIPAIATTTSAVVGLVCLELYKVVQGHQQLDSFKNSFINLALPFFSFSAPLAPGYHQYYDKKWTLWDRFDVQGLQPSGEEMTLKQFLDYFKTEHKLEITMLSQGVSMLYSFFMPATKLQERLDQPMTEIVSRVSKRKLGQHVKSLVFELCCNNESGDDIEVPYVRYIIG
SIO_010081: LOC103694557
subclass of: SO_0000673
so part of: LOC103694557
location: join(788868..788984,789107..789162,789247..789415,789502..789636,790196..790302,790515..790605,791288..791420,792937..793034,793129..793275,793387..793563,793673..793777,793864..793944,794278..794433,796179..796344,796556..796752,798648..798712,798912..799107,799712..799786,799893..800082,801222..801310,807597..807689,807813..808004,808569..808670,808761..808861,809023..809158)
location: region:788868-809158:1
so has part: feature:788868-788984:1:exon
so has part: feature:789107-789162:1:exon
so has part: feature:789247-789415:1:exon
so has part: feature:789502-789636:1:exon
so has part: feature:790196-790302:1:exon
so has part: feature:790515-790605:1:exon
so has part: feature:791288-791420:1:exon
so has part: feature:792937-793034:1:exon
so has part: feature:793129-793275:1:exon
so has part: feature:793387-793563:1:exon
so has part: feature:793673-793777:1:exon
so has part: feature:793864-793944:1:exon
so has part: feature:794278-794433:1:exon
so has part: feature:796179-796344:1:exon
so has part: feature:796556-796752:1:exon
so has part: feature:798648-798712:1:exon
so has part: feature:798912-799107:1:exon
so has part: feature:799712-799786:1:exon
so has part: feature:799893-800082:1:exon
so has part: feature:801222-801310:1:exon
so has part: feature:807597-807689:1:exon
so has part: feature:807813-808004:1:exon
so has part: feature:808569-808670:1:exon
so has part: feature:808761-808861:1:exon
so has part: feature:809023-809158:1:exon

XP_008771915.1
type: Protein
SIO_000068: ncbiprotein

position:809158:1
position: 809158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788868-788984:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:789107-789162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:789247-789415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:789502-789636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:790196-790302:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:790515-790605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:791288-791420:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:792937-793034:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:793129-793275:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:793387-793563:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:793673-793777:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:793864-793944:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:794278-794433:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:796179-796344:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:796556-796752:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:798648-798712:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:798912-799107:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:799712-799786:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:799893-800082:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:801222-801310:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:807597-807689:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:807813-808004:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:808569-808670:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:808761-808861:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:809023-809158:1:exon

Eif2s3y
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: Eif2s3y
note: eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 869654..889341
location: region:869654-889341:1
so has part: feature:869654-889341:1:exon
subclass of: SO_0000010

100312984
type: Gene
SIO_000068: ncbigene

2314438
type: RGD
SIO_000068: rgd

position:869654:1
position: 869654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889341:1
position: 889341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869654-889341:1:exon

Eif2s3y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Eif2s3y
product: eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_039100656.1
SIO_010081: Eif2s3y
subclass of: SO_0000673
so part of: Eif2s3y
location: join(869654..869762,870349..870412,870929..871056,871144..871265,872129..872223,872981..873139,874402..874536,874676..874770,875456..875600,875869..875921)
location: region:869654-875921:1
so has part: feature:869654-869762:1:exon
so has part: feature:870349-870412:1:exon
so has part: feature:870929-871056:1:exon
so has part: feature:871144-871265:1:exon
so has part: feature:872129-872223:1:exon
so has part: feature:872981-873139:1:exon
so has part: feature:874402-874536:1:exon
so has part: feature:874676-874770:1:exon
so has part: feature:875456-875600:1:exon
so has part: feature:875869-875921:1:exon

position:875921:1
position: 875921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869654-869762:1:exon

position:869762:1
position: 869762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:870349-870412:1:exon

position:870349:1
position: 870349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870412:1
position: 870412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:870929-871056:1:exon

position:870929:1
position: 870929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871056:1
position: 871056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:871144-871265:1:exon

position:871144:1
position: 871144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871265:1
position: 871265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:872129-872223:1:exon

position:872129:1
position: 872129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872223:1
position: 872223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:872981-873139:1:exon

position:872981:1
position: 872981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873139:1
position: 873139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:874402-874536:1:exon

position:874402:1
position: 874402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874536:1
position: 874536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:874676-874770:1:exon

position:874676:1
position: 874676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874770:1
position: 874770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:875456-875600:1:exon

position:875456:1
position: 875456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875600:1
position: 875600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:875869-875921:1:exon

position:875869:1
position: 875869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Eif2s3y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Eif2s3y
product: eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001167666.1
SIO_010081: Eif2s3y
subclass of: SO_0000673
so part of: Eif2s3y
location: join(869689..869762,870349..870412,870929..871056,871144..871265,872129..872223,872981..873139,874402..874536,874676..874770,875456..875600,878077..878246,885711..885883,888970..889341)
location: region:869689-889341:1
so has part: feature:869689-869762:1:exon
so has part: feature:870349-870412:1:exon
so has part: feature:870929-871056:1:exon
so has part: feature:871144-871265:1:exon
so has part: feature:872129-872223:1:exon
so has part: feature:872981-873139:1:exon
so has part: feature:874402-874536:1:exon
so has part: feature:874676-874770:1:exon
so has part: feature:875456-875600:1:exon
so has part: feature:878077-878246:1:exon
so has part: feature:885711-885883:1:exon
so has part: feature:888970-889341:1:exon

position:869689:1
position: 869689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869689-869762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870349-870412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870929-871056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:871144-871265:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:872129-872223:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:872981-873139:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874402-874536:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874676-874770:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:875456-875600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:878077-878246:1:exon

position:878077:1
position: 878077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878246:1
position: 878246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:885711-885883:1:exon

position:885711:1
position: 885711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885883:1
position: 885883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:888970-889341:1:exon

position:888970:1
position: 888970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Eif2s3y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Eif2s3y
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: eukaryotic translation initiation factor 2 subunit 3, Y-linked
translation: MAGGEAGVTLGQPHLSRQDLATLDVTKLTPLSHEIISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKLDDSSCPRPECYRSCGSSTPDEFPSDIPGIKGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPLRDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAEHNDLQYAAPGGLIGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAVKADLGKIVLTNPVCTEVGEKIALSRRVEKHWRLIGWGQIRRGVTIKPTIDDE
SIO_010081: Eif2s3y
subclass of: SO_0000673
so part of: Eif2s3y
location: join(869694..869762,870349..870412,870929..871056,871144..871265,872129..872223,872981..873139,874402..874536,874676..874770,875456..875600,878077..878246,885711..885883,888970..889033)
location: region:869694-889033:1
so has part: feature:869694-869762:1:exon
so has part: feature:870349-870412:1:exon
so has part: feature:870929-871056:1:exon
so has part: feature:871144-871265:1:exon
so has part: feature:872129-872223:1:exon
so has part: feature:872981-873139:1:exon
so has part: feature:874402-874536:1:exon
so has part: feature:874676-874770:1:exon
so has part: feature:875456-875600:1:exon
so has part: feature:878077-878246:1:exon
so has part: feature:885711-885883:1:exon
so has part: feature:888970-889033:1:exon

NP_001161138.1
type: Protein
SIO_000068: ncbiprotein

position:869694:1
position: 869694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889033:1
position: 889033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869694-869762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870349-870412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870929-871056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:871144-871265:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:872129-872223:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:872981-873139:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874402-874536:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874676-874770:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:875456-875600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:878077-878246:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:885711-885883:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:888970-889033:1:exon

Eif2s3y
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 10116
gene: Eif2s3y
note: N-acetylalanine. /evidence=ECO:0000250|UniProtKB:P41091; propagated from UniProtKB/Swiss-Prot (C9WPN6.2); acetylation site
SIO_010081: Eif2s3y
subclass of: SO_0000673
so part of: Eif2s3y
location: 869697..869699
location: region:869697-869699:1
so has part: feature:869697-869699:1:exon

position:869697:1
position: 869697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869699:1
position: 869699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869697-869699:1:exon

Eif2s3y
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 10116
gene: Eif2s3y
note: Phosphoserine. /evidence=ECO:0000250|UniProtKB:Q9Z0N1; propagated from UniProtKB/Swiss-Prot (C9WPN6.2); phosphorylation site
SIO_010081: Eif2s3y
subclass of: SO_0000673
so part of: Eif2s3y
location: 869739..869741
location: region:869739-869741:1
so has part: feature:869739-869741:1:exon

position:869739:1
position: 869739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869741:1
position: 869741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869739-869741:1:exon

Eif2s3y
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 10116
gene: Eif2s3y
note: propagated from UniProtKB/Swiss-Prot (C9WPN6.2); Region: G1. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059
SIO_010081: Eif2s3y
subclass of: SO_0000673
so part of: Eif2s3y
location: 870937..870960
location: region:870937-870960:1
so has part: feature:870937-870960:1:exon

position:870937:1
position: 870937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870960:1
position: 870960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870937-870960:1:exon

Eif2s3y
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 10116
gene: Eif2s3y
note: propagated from UniProtKB/Swiss-Prot (C9WPN6.2); Region: G2. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059
SIO_010081: Eif2s3y
subclass of: SO_0000673
so part of: Eif2s3y
location: 871021..871035
location: region:871021-871035:1
so has part: feature:871021-871035:1:exon

position:871021:1
position: 871021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871035:1
position: 871035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871021-871035:1:exon

Eif2s3y
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 10116
gene: Eif2s3y
note: propagated from UniProtKB/Swiss-Prot (C9WPN6.2); Region: G3. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059
SIO_010081: Eif2s3y
subclass of: SO_0000673
so part of: Eif2s3y
location: 872145..872156
location: region:872145-872156:1
so has part: feature:872145-872156:1:exon

position:872145:1
position: 872145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872156:1
position: 872156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:872145-872156:1:exon

Eif2s3y
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 10116
gene: Eif2s3y
note: propagated from UniProtKB/Swiss-Prot (C9WPN6.2); Region: G4. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059
SIO_010081: Eif2s3y
subclass of: SO_0000673
so part of: Eif2s3y
location: 873070..873081
location: region:873070-873081:1
so has part: feature:873070-873081:1:exon

position:873070:1
position: 873070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873081:1
position: 873081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:873070-873081:1:exon

Eif2s3y
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 10116
gene: Eif2s3y
note: propagated from UniProtKB/Swiss-Prot (C9WPN6.2); Region: G5. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059
SIO_010081: Eif2s3y
subclass of: SO_0000673
so part of: Eif2s3y
location: 874437..874445
location: region:874437-874445:1
so has part: feature:874437-874445:1:exon

position:874437:1
position: 874437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874445:1
position: 874445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874437-874445:1:exon

Eif2s3y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Eif2s3y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 2 subunit 3, Y-linked isoform X1
translation: MAGGEAGVTLGQPHLSRQDLATLDVTKLTPLSHEIISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKLDDSSCPRPECYRSCGSSTPDEFPSDIPGIKGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPLRDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAEHNDLQYAAPGGLIAGDRTQGLALPR
SIO_010081: Eif2s3y
subclass of: SO_0000673
so part of: Eif2s3y
location: join(869694..869762,870349..870412,870929..871056,871144..871265,872129..872223,872981..873139,874402..874536,874676..874770,875456..875600,875869..875906)
location: region:869694-875906:1
so has part: feature:869694-869762:1:exon
so has part: feature:870349-870412:1:exon
so has part: feature:870929-871056:1:exon
so has part: feature:871144-871265:1:exon
so has part: feature:872129-872223:1:exon
so has part: feature:872981-873139:1:exon
so has part: feature:874402-874536:1:exon
so has part: feature:874676-874770:1:exon
so has part: feature:875456-875600:1:exon
so has part: feature:875869-875906:1:exon

XP_038956584.1
type: Protein
SIO_000068: ncbiprotein

position:875906:1
position: 875906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869694-869762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870349-870412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870929-871056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:871144-871265:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:872129-872223:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:872981-873139:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874402-874536:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874676-874770:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:875456-875600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:875869-875906:1:exon

LOC108353316
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC108353316
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(924495..937010)
location: region:924495-937010:-1
so has part: feature:924495-937010:-1:exon
subclass of: SO_0000011

108353316
type: Gene
SIO_000068: ncbigene

11490472
type: RGD
SIO_000068: rgd

position:924495:-1
position: 924495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937010:-1
position: 937010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:924495-937010:-1:exon

LOC108353316
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC108353316
product: uncharacterized LOC108353316, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_001842840.2
SIO_010081: LOC108353316
subclass of: SO_0000673
so part of: LOC108353316
location: complement(join(924495..925518,931958..933367,933967..937008))
location: region:924495-937008:-1
so has part: feature:933967-937008:-1:exon
so has part: feature:931958-933367:-1:exon
so has part: feature:924495-925518:-1:exon

position:937008:-1
position: 937008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933967-937008:-1:exon

position:933967:-1
position: 933967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:931958-933367:-1:exon

position:931958:-1
position: 931958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933367:-1
position: 933367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:924495-925518:-1:exon

position:925518:-1
position: 925518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC108353316
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC108353316
product: uncharacterized LOC108353316, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005498710.1
SIO_010081: LOC108353316
subclass of: SO_0000673
so part of: LOC108353316
location: complement(join(930701..933367,933979..937010))
location: region:930701-937010:-1
so has part: feature:933979-937010:-1:exon
so has part: feature:930701-933367:-1:exon

position:930701:-1
position: 930701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933979-937010:-1:exon

position:933979:-1
position: 933979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:930701-933367:-1:exon

LOC108353316
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC108353316
product: uncharacterized LOC108353316, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_001842842.2
SIO_010081: LOC108353316
subclass of: SO_0000673
so part of: LOC108353316
location: complement(join(930701..932091,933279..933367,933967..937007))
location: region:930701-937007:-1
so has part: feature:933967-937007:-1:exon
so has part: feature:933279-933367:-1:exon
so has part: feature:930701-932091:-1:exon

position:937007:-1
position: 937007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933967-937007:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933279-933367:-1:exon

position:933279:-1
position: 933279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:930701-932091:-1:exon

position:932091:-1
position: 932091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC108353316
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC108353316
product: uncharacterized LOC108353316, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_001842841.2
SIO_010081: LOC108353316
subclass of: SO_0000673
so part of: LOC108353316
location: complement(join(930701..933367,933967..934064,934159..937006))
location: region:930701-937006:-1
so has part: feature:934159-937006:-1:exon
so has part: feature:933967-934064:-1:exon
so has part: feature:930701-933367:-1:exon

position:937006:-1
position: 937006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934159-937006:-1:exon

position:934159:-1
position: 934159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933967-934064:-1:exon

position:934064:-1
position: 934064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:930701-933367:-1:exon

LOC108353316
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC108353316
product: uncharacterized LOC108353316, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XR_005498709.1
SIO_010081: LOC108353316
subclass of: SO_0000673
so part of: LOC108353316
location: complement(join(930701..933367,933967..934064,935315..937004))
location: region:930701-937004:-1
so has part: feature:935315-937004:-1:exon
so has part: feature:933967-934064:-1:exon
so has part: feature:930701-933367:-1:exon

position:937004:-1
position: 937004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:935315-937004:-1:exon

position:935315:-1
position: 935315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933967-934064:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:930701-933367:-1:exon

LOC108353316
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC108353316
product: uncharacterized LOC108353316, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XR_001842839.2
SIO_010081: LOC108353316
subclass of: SO_0000673
so part of: LOC108353316
location: complement(join(930701..933367,933967..937003))
location: region:930701-937003:-1
so has part: feature:933967-937003:-1:exon
so has part: feature:930701-933367:-1:exon

position:937003:-1
position: 937003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933967-937003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:930701-933367:-1:exon

LOC103694572
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 940485..942256
location: region:940485-942256:1
so has part: feature:940485-942256:1:exon

103694572
type: Gene
SIO_000068: ncbigene

9438740
type: RGD
SIO_000068: rgd

position:940485:1
position: 940485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942256:1
position: 942256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940485-942256:1:exon

LOC103694572
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC103694572
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC103694572
subclass of: SO_0000673
so part of: LOC103694572
location: 940485..942256
location: region:940485-942256:1
so has part: feature:940485-942256:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:940485-942256:1:exon

Uty
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(942838..1105313)
location: region:942838-1105313:-1
so has part: feature:942838-1105313:-1:exon
subclass of: SO_0000010

100310845
type: Gene
SIO_000068: ncbigene

1565481
type: RGD
SIO_000068: rgd

position:942838:-1
position: 942838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105313:-1
position: 1105313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:942838-1105313:-1:exon

Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_039100682.1
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(942838..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023580..1023668,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1072978..1073027,1096192..1096300,1102652..1102715,1102902..1103007,1103291..1103517))
location: region:942838-1103517:-1
so has part: feature:1103291-1103517:-1:exon
so has part: feature:1102902-1103007:-1:exon
so has part: feature:1102652-1102715:-1:exon
so has part: feature:1096192-1096300:-1:exon
so has part: feature:1072978-1073027:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1023580-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:942838-946325:-1:exon

position:1103517:-1
position: 1103517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103291-1103517:-1:exon

position:1103291:-1
position: 1103291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1102902-1103007:-1:exon

position:1102902:-1
position: 1102902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103007:-1
position: 1103007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1102652-1102715:-1:exon

position:1102652:-1
position: 1102652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102715:-1
position: 1102715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1096192-1096300:-1:exon

position:1096192:-1
position: 1096192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096300:-1
position: 1096300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1072978-1073027:-1:exon

position:1072978:-1
position: 1072978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073027:-1
position: 1073027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1048796-1048854:-1:exon

position:1048796:-1
position: 1048796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048854:-1
position: 1048854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1046288-1046408:-1:exon

position:1046288:-1
position: 1046288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046408:-1
position: 1046408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1041209-1041263:-1:exon

position:1041209:-1
position: 1041209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041263:-1
position: 1041263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1038113-1038147:-1:exon

position:1038113:-1
position: 1038113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038147:-1
position: 1038147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1023580-1023668:-1:exon

position:1023580:-1
position: 1023580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023668:-1
position: 1023668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1022214-1022340:-1:exon

position:1022214:-1
position: 1022214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022340:-1
position: 1022340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1008498-1008596:-1:exon

position:1008498:-1
position: 1008498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008596:-1
position: 1008596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1007644-1007863:-1:exon

position:1007644:-1
position: 1007644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007863:-1
position: 1007863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1006826-1006960:-1:exon

position:1006826:-1
position: 1006826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006960:-1
position: 1006960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1005661-1005756:-1:exon

position:1005661:-1
position: 1005661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005756:-1
position: 1005756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:993904-994637:-1:exon

position:993904:-1
position: 993904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994637:-1
position: 994637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:989677-989806:-1:exon

position:989677:-1
position: 989677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989806:-1
position: 989806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:987859-987964:-1:exon

position:987859:-1
position: 987859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987964:-1
position: 987964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:986947-987152:-1:exon

position:986947:-1
position: 986947
reference: sequence
type: ReverseStrandPosition
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Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_039100683.1
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
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location: region:942838-1037927:-1
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Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_039100684.1
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
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location: region:942838-1014658:-1
so has part: feature:1014506-1014658:-1:exon
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urn:…
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urn:…
SIO_000300: 18
SIO_000628: feature:942838-946325:-1:exon

Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039100676.1
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
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location: region:943152-1103544:-1
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Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_039100671.1
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
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location: region:943152-1103530:-1
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Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_039100674.1
SIO_010081: Uty
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Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_008773695.3
SIO_010081: Uty
subclass of: SO_0000673
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Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039100673.1
SIO_010081: Uty
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Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_039100672.1
SIO_010081: Uty
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Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_039100677.1
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
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location: region:943152-1103523:-1
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Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_039100675.1
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
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location: region:943152-1103521:-1
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Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_039100678.1
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
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location: region:943152-1103520:-1
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Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_008773696.3
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
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location: region:943152-1103518:-1
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Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_017602447.2
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(943152..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023575..1023668,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1072978..1073027,1096192..1096300,1102652..1102712,1102902..1103065))
location: region:943152-1103065:-1
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position:1103065:-1
position: 1103065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:943152-946325:-1:exon

Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_017602449.2
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(943152..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1007644..1007863,1008498..1008596,1022214..1022340,1023575..1023668,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1072978..1073027,1096192..1096300,1102652..1102715,1102902..1103065))
location: region:943152-1103065:-1
so has part: feature:1102902-1103065:-1:exon
so has part: feature:1102652-1102715:-1:exon
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so has part: feature:947372-947542:-1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 25
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urn:…
SIO_000300: 26
SIO_000628: feature:943152-946325:-1:exon

Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039100679.1
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(943152..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023580..1023668,1037904..1037974,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1063659..1065382))
location: region:943152-1065382:-1
so has part: feature:1063659-1065382:-1:exon
so has part: feature:1048796-1048854:-1:exon
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so has part: feature:947372-947542:-1:exon
so has part: feature:943152-946325:-1:exon

position:1065382:-1
position: 1065382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063659-1065382:-1:exon

position:1063659:-1
position: 1063659
reference: sequence
type: ReverseStrandPosition
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urn:…
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urn:…
SIO_000300: 25
SIO_000628: feature:943152-946325:-1:exon

Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_039100680.1
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(943152..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023580..1023668,1037904..1037978,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048814))
location: region:943152-1048814:-1
so has part: feature:1048796-1048814:-1:exon
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so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:943152-946325:-1:exon

position:1048814:-1
position: 1048814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048796-1048814:-1:exon

urn:…
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SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1037904-1037978:-1:exon

position:1037978:-1
position: 1037978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1023580-1023668:-1:exon

urn:…
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urn:…
SIO_000300: 21
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SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
SIO_000628: feature:943152-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X2
translation: MQMPVKFDILRISGNEEKKMAAEKARGEGEEGSFSLTVEEKKALCGLDSFFGFLSLCKDGVKMKTLLNKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKLWLVCKLRFQQKRDTNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAHLFEIQNGMARNSWCSKDICFMVIRKHRDRGNTILQKQPMNNFYKLKAFHHKSKQLYCNSWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023580..1023668,1037904..1037974,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1067999..1068043,1072978..1073027,1096192..1096300,1102652..1102712,1102902..1103007,1103291..1103330))
location: region:946299-1103330:-1
so has part: feature:1103291-1103330:-1:exon
so has part: feature:1102902-1103007:-1:exon
so has part: feature:1102652-1102712:-1:exon
so has part: feature:1096192-1096300:-1:exon
so has part: feature:1072978-1073027:-1:exon
so has part: feature:1067999-1068043:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1037904-1037974:-1:exon
so has part: feature:1023580-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_038956599.1
type: Protein
SIO_000068: ncbiprotein

position:946299:-1
position: 946299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103330:-1
position: 1103330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103291-1103330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102902-1103007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102652-1102712:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096192-1096300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072978-1073027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1067999-1068043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1048796-1048854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1046288-1046408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041209-1041263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1037904-1037974:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1023580-1023668:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1006826-1006960:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X10
translation: MQMPVKFDILRISGNEEKKMAAEKARGEGEEGSFSLTVEEKKALCGLDSSFFGFLSLCKDGVKMKTLLNKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAHLFEIQRKYHSAKAAYEQLLQIESLPSQVKATVLQQLGWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1007644..1007863,1008498..1008596,1022214..1022340,1023575..1023668,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1072978..1073027,1096192..1096300,1102652..1102715,1102902..1103007,1103291..1103330))
location: region:946299-1103330:-1
so has part: feature:1103291-1103330:-1:exon
so has part: feature:1102902-1103007:-1:exon
so has part: feature:1102652-1102715:-1:exon
so has part: feature:1096192-1096300:-1:exon
so has part: feature:1072978-1073027:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1023575-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_038956606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1103291-1103330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102902-1103007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102652-1102715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096192-1096300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072978-1073027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1048796-1048854:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1046288-1046408:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1041209-1041263:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1023575-1023668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X7
translation: MQMPVKFDILRISGNEEKKMAAEKARGEGEEGSFSLTVEEKKALCGLDSSFFGFLSLCKDGVKMKTLLNKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAHLFEIQRKYHSAKAAYEQLLQIESLPSQVKATVLQQLGWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023575..1023668,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1072978..1073027,1096192..1096300,1102652..1102715,1102902..1103007,1103291..1103330))
location: region:946299-1103330:-1
so has part: feature:1103291-1103330:-1:exon
so has part: feature:1102902-1103007:-1:exon
so has part: feature:1102652-1102715:-1:exon
so has part: feature:1096192-1096300:-1:exon
so has part: feature:1072978-1073027:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1023575-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_008771918.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1103291-1103330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102902-1103007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102652-1102715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096192-1096300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072978-1073027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1048796-1048854:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1046288-1046408:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1041209-1041263:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1023575-1023668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1006826-1006960:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X3
translation: MQMPVKFDILRISGNEEKKMAAEKARGEGEEGSFSLTVEEKKALCGLDSSFFGFLSLCKDGVKMKTLLNKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAHLFEIQNGMARNSWCSKDICFMVIRKHRDRGNTILQKQPMNNFYKLKAFHHKSKQLYCNSWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023580..1023668,1037904..1037974,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1072978..1073027,1096192..1096300,1102652..1102715,1102902..1103007,1103291..1103330))
location: region:946299-1103330:-1
so has part: feature:1103291-1103330:-1:exon
so has part: feature:1102902-1103007:-1:exon
so has part: feature:1102652-1102715:-1:exon
so has part: feature:1096192-1096300:-1:exon
so has part: feature:1072978-1073027:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1037904-1037974:-1:exon
so has part: feature:1023580-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_038956600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1103291-1103330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102902-1103007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102652-1102715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096192-1096300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072978-1073027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1048796-1048854:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1046288-1046408:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1041209-1041263:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1037904-1037974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1023580-1023668:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1006826-1006960:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X9
translation: MQMPVKFDILRISGNEEKKMAAEKARGEGEEGSFSLTVEEKKALCGLDSSFFGFLSLCKDGVKMKTLLNKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKLWLVCKLRFQQKRDTNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAHLFEIQRKYHSAKAAYEQLLQIESLPSQVKATVLQQLGWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1007644..1007863,1008498..1008596,1022214..1022340,1023575..1023668,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1067999..1068043,1072978..1073027,1096192..1096300,1102652..1102715,1102902..1103007,1103291..1103330))
location: region:946299-1103330:-1
so has part: feature:1103291-1103330:-1:exon
so has part: feature:1102902-1103007:-1:exon
so has part: feature:1102652-1102715:-1:exon
so has part: feature:1096192-1096300:-1:exon
so has part: feature:1072978-1073027:-1:exon
so has part: feature:1067999-1068043:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1023575-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_038956605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1103291-1103330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102902-1103007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102652-1102715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096192-1096300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072978-1073027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1067999-1068043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1048796-1048854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1046288-1046408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041209-1041263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1023575-1023668:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X6
translation: MQMPVKFDILRISGNEEKKMAAEKARGEGEEGSFSLTVEEKKALCGLDSSFFGFLSLCKDGVKMKTLLNKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKLWLVCKLRFQQKRDTNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAHLFEIQRKYHSAKAAYEQLLQIESLPSQVKATVLQQLGWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023575..1023668,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1067999..1068043,1072978..1073027,1096192..1096300,1102652..1102715,1102902..1103007,1103291..1103330))
location: region:946299-1103330:-1
so has part: feature:1103291-1103330:-1:exon
so has part: feature:1102902-1103007:-1:exon
so has part: feature:1102652-1102715:-1:exon
so has part: feature:1096192-1096300:-1:exon
so has part: feature:1072978-1073027:-1:exon
so has part: feature:1067999-1068043:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1023575-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_038956603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1103291-1103330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102902-1103007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102652-1102715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096192-1096300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072978-1073027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1067999-1068043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1048796-1048854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1046288-1046408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041209-1041263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1023575-1023668:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1006826-1006960:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X8
translation: MQMPVKFDILRISGNEEKKMAAEKARGEGEEGSFSLTVEEKKALCGLDSSFFGFLSLCKDGVKMKTLLNKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKLWLVCKLRFQQKRDTNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAHLFEIQNGMARNSWCSKDICFMVIRKHRDRGNTILQKQPMNNFYKLKAFHHKSKQLYCNSWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1007644..1007863,1008498..1008596,1022214..1022340,1023580..1023668,1037904..1037974,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1067999..1068043,1072978..1073027,1096192..1096300,1102652..1102715,1102902..1103007,1103291..1103330))
location: region:946299-1103330:-1
so has part: feature:1103291-1103330:-1:exon
so has part: feature:1102902-1103007:-1:exon
so has part: feature:1102652-1102715:-1:exon
so has part: feature:1096192-1096300:-1:exon
so has part: feature:1072978-1073027:-1:exon
so has part: feature:1067999-1068043:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1037904-1037974:-1:exon
so has part: feature:1023580-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_038956604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1103291-1103330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102902-1103007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102652-1102715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096192-1096300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072978-1073027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1067999-1068043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1048796-1048854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1046288-1046408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041209-1041263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1037904-1037974:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1023580-1023668:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X1
translation: MQMPVKFDILRISGNEEKKMAAEKARGEGEEGSFSLTVEEKKALCGLDSSFFGFLSLCKDGVKMKTLLNKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKLWLVCKLRFQQKRDTNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAHLFEIQNGMARNSWCSKDICFMVIRKHRDRGNTILQKQPMNNFYKLKAFHHKSKQLYCNSWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023580..1023668,1037904..1037974,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1067999..1068043,1072978..1073027,1096192..1096300,1102652..1102715,1102902..1103007,1103291..1103330))
location: region:946299-1103330:-1
so has part: feature:1103291-1103330:-1:exon
so has part: feature:1102902-1103007:-1:exon
so has part: feature:1102652-1102715:-1:exon
so has part: feature:1096192-1096300:-1:exon
so has part: feature:1072978-1073027:-1:exon
so has part: feature:1067999-1068043:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1037904-1037974:-1:exon
so has part: feature:1023580-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_008771917.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1103291-1103330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102902-1103007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102652-1102715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096192-1096300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072978-1073027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1067999-1068043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1048796-1048854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1046288-1046408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041209-1041263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1037904-1037974:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1023580-1023668:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1006826-1006960:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X14
translation: MAAEKARGEGEEGSFSLTVEEKKALCGLDSFFGFLSLCKDGVKMKTLLNKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAHLFEIQRKYHSAKAAYEQLLQIESLPSQVKATVLQQLGWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023575..1023668,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1072978..1073027,1096192..1096300,1102652..1102712,1102902..1102990))
location: region:946299-1102990:-1
so has part: feature:1102902-1102990:-1:exon
so has part: feature:1102652-1102712:-1:exon
so has part: feature:1096192-1096300:-1:exon
so has part: feature:1072978-1073027:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1023575-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_017457936.2
type: Protein
SIO_000068: ncbiprotein

position:1102990:-1
position: 1102990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102902-1102990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102652-1102712:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1096192-1096300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072978-1073027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1048796-1048854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1046288-1046408:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041209-1041263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1023575-1023668:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1006826-1006960:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X5
translation: MAAEKARGEGEEGSFSLTVEEKKALCGLDSFFGFLSLCKDGVKMKTLLNKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKLWLVCKLRFQQKRDTNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAHLFEIQNGMARNSWCSKDICFMVIRKHRDRGNTILQKQPMNNFYKLKAFHHKSKQLYCNSWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023580..1023668,1037904..1037974,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1067999..1068043,1072978..1073027,1096192..1096300,1102652..1102712,1102902..1102990))
location: region:946299-1102990:-1
so has part: feature:1102902-1102990:-1:exon
so has part: feature:1102652-1102712:-1:exon
so has part: feature:1096192-1096300:-1:exon
so has part: feature:1072978-1073027:-1:exon
so has part: feature:1067999-1068043:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1037904-1037974:-1:exon
so has part: feature:1023580-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_038956602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1102902-1102990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102652-1102712:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1096192-1096300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072978-1073027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1067999-1068043:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1048796-1048854:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1046288-1046408:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1041209-1041263:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1037904-1037974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1023580-1023668:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1006826-1006960:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X15
translation: MAAEKARGEGEEGSFSLTVEEKKALCGLDSSFFGFLSLCKDGVKMKTLLNKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAHLFEIQRKYHSAKAAYEQLLQIESLPSQVKATVLQQLGWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1007644..1007863,1008498..1008596,1022214..1022340,1023575..1023668,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1072978..1073027,1096192..1096300,1102652..1102715,1102902..1102990))
location: region:946299-1102990:-1
so has part: feature:1102902-1102990:-1:exon
so has part: feature:1102652-1102715:-1:exon
so has part: feature:1096192-1096300:-1:exon
so has part: feature:1072978-1073027:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1023575-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_017457938.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1102902-1102990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102652-1102715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1096192-1096300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072978-1073027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1048796-1048854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1046288-1046408:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041209-1041263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1023575-1023668:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X4
translation: MAAEKARGEGEEGSFSLTVEEKKALCGLDSSFFGFLSLCKDGVKMKTLLNKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKLWLVCKLRFQQKRDTNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAHLFEIQNGMARNSWCSKDICFMVIRKHRDRGNTILQKQPMNNFYKLKAFHHKSKQLYCNSWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023580..1023668,1037904..1037974,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1067999..1068043,1072978..1073027,1096192..1096300,1102652..1102715,1102902..1102990))
location: region:946299-1102990:-1
so has part: feature:1102902-1102990:-1:exon
so has part: feature:1102652-1102715:-1:exon
so has part: feature:1096192-1096300:-1:exon
so has part: feature:1072978-1073027:-1:exon
so has part: feature:1067999-1068043:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1037904-1037974:-1:exon
so has part: feature:1023580-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_038956601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1102902-1102990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102652-1102715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1096192-1096300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072978-1073027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1067999-1068043:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1048796-1048854:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1046288-1046408:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1041209-1041263:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1037904-1037974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1023580-1023668:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1006826-1006960:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X11
translation: MYLCRSQDCMYMLSAGGICRDKRKALCLLKNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAHLFEIQNGMARNSWCSKDICFMVIRKHRDRGNTILQKQPMNNFYKLKAFHHKSKQLYCNSWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023580..1023668,1037904..1037974,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1063659..1063748))
location: region:946299-1063748:-1
so has part: feature:1063659-1063748:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1037904-1037974:-1:exon
so has part: feature:1023580-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_038956607.1
type: Protein
SIO_000068: ncbiprotein

position:1063748:-1
position: 1063748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063659-1063748:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1048796-1048854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046288-1046408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1041209-1041263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1037904-1037974:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1023580-1023668:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1006826-1006960:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X13
translation: MSVPCPVLKFSFILLTYLKFRGNTILQKQPMNNFYKLKAFHHKSKQLYCNSWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023580..1023668,1038113..1038147,1041209..1041235))
location: region:946299-1041235:-1
so has part: feature:1041209-1041235:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1023580-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_038956610.1
type: Protein
SIO_000068: ncbiprotein

position:1041235:-1
position: 1041235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1041209-1041235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023580-1023668:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1006826-1006960:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X12
translation: MSVPCPVLKFSFILLTYLKFRQNGMARNSWCSKDICFMVIRKHRDRGNTILQKQPMNNFYKLKAFHHKSKQLYCNSWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023580..1023668,1037904..1037978,1038113..1038147,1041209..1041235))
location: region:946299-1041235:-1
so has part: feature:1041209-1041235:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1037904-1037978:-1:exon
so has part: feature:1023580-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_038956608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1041209-1041235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1037904-1037978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1023580-1023668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1006826-1006960:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X16
translation: MHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022335))
location: region:946299-1022335:-1
so has part: feature:1022214-1022335:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_038956611.1
type: Protein
SIO_000068: ncbiprotein

position:1022335:-1
position: 1022335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022214-1022335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1006826-1006960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X17
translation: MPSFFDWMVLPLCQRSSDYRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLAPSLSSSS
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(946299..946325,947372..947542,950386..950512,961053..961194,962016..962203,966803..966917,968436..968584,968985..969059,969133..969197,986947..987152,987859..987964,989677..989806,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1014506..1014564))
location: region:946299-1014564:-1
so has part: feature:1014506-1014564:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:989677-989806:-1:exon
so has part: feature:987859-987964:-1:exon
so has part: feature:986947-987152:-1:exon
so has part: feature:969133-969197:-1:exon
so has part: feature:968985-969059:-1:exon
so has part: feature:968436-968584:-1:exon
so has part: feature:966803-966917:-1:exon
so has part: feature:962016-962203:-1:exon
so has part: feature:961053-961194:-1:exon
so has part: feature:950386-950512:-1:exon
so has part: feature:947372-947542:-1:exon
so has part: feature:946299-946325:-1:exon

XP_038956612.1
type: Protein
SIO_000068: ncbiprotein

position:1014564:-1
position: 1014564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1014506-1014564:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1006826-1006960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989677-989806:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987859-987964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986947-987152:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:969133-969197:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:968985-969059:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:968436-968584:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:966803-966917:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:962016-962203:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:961053-961194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:950386-950512:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:947372-947542:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:946299-946325:-1:exon

Uty
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005498739.1
SIO_010081: Uty
so part of: Uty
location: complement(join(989677..989806,991323..991425,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023580..1023668,1037904..1037974,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1067999..1068043,1072978..1073027,1096192..1096300,1102652..1102715,1102902..1103007,1103291..1105313))
location: region:989677-1105313:-1
so has part: feature:1103291-1105313:-1:exon
so has part: feature:1102902-1103007:-1:exon
so has part: feature:1102652-1102715:-1:exon
so has part: feature:1096192-1096300:-1:exon
so has part: feature:1072978-1073027:-1:exon
so has part: feature:1067999-1068043:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1037904-1037974:-1:exon
so has part: feature:1023580-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:991323-991425:-1:exon
so has part: feature:989677-989806:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1103291-1105313:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102902-1103007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102652-1102715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096192-1096300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072978-1073027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1067999-1068043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1048796-1048854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1046288-1046408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041209-1041263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1037904-1037974:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1023580-1023668:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1006826-1006960:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:991323-991425:-1:exon

position:991323:-1
position: 991323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991425:-1
position: 991425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:989677-989806:-1:exon

Uty
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Uty
product: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_039100685.1
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(991077..991425,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023580..1023668,1037904..1037974,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1067999..1068043,1072978..1073027,1096192..1096300,1102652..1102715,1102902..1103007,1103291..1105313))
location: region:991077-1105313:-1
so has part: feature:1103291-1105313:-1:exon
so has part: feature:1102902-1103007:-1:exon
so has part: feature:1102652-1102715:-1:exon
so has part: feature:1096192-1096300:-1:exon
so has part: feature:1072978-1073027:-1:exon
so has part: feature:1067999-1068043:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1037904-1037974:-1:exon
so has part: feature:1023580-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:991077-991425:-1:exon

position:991077:-1
position: 991077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103291-1105313:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102902-1103007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102652-1102715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096192-1096300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072978-1073027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1067999-1068043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1048796-1048854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1046288-1046408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041209-1041263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1037904-1037974:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1023580-1023668:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1006826-1006960:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:991077-991425:-1:exon

Uty
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Uty
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X18
translation: MQMPVKFDILRISGNEEKKMAAEKARGEGEEGSFSLTVEEKKALCGLDSSFFGFLSLCKDGVKMKTLLNKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKLWLVCKLRFQQKRDTNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAHLFEIQNGMARNSWCSKDICFMVIRKHRDRGNTILQKQPMNNFYKLKAFHHKSKQLYCNSWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACSKGNGDKRQKNLWAFQ
SIO_010081: Uty
subclass of: SO_0000673
so part of: Uty
location: complement(join(991377..991425,993904..994637,1005661..1005756,1006826..1006960,1007644..1007863,1008498..1008596,1022214..1022340,1023580..1023668,1037904..1037974,1038113..1038147,1041209..1041263,1046288..1046408,1048796..1048854,1067999..1068043,1072978..1073027,1096192..1096300,1102652..1102715,1102902..1103007,1103291..1103330))
location: region:991377-1103330:-1
so has part: feature:1103291-1103330:-1:exon
so has part: feature:1102902-1103007:-1:exon
so has part: feature:1102652-1102715:-1:exon
so has part: feature:1096192-1096300:-1:exon
so has part: feature:1072978-1073027:-1:exon
so has part: feature:1067999-1068043:-1:exon
so has part: feature:1048796-1048854:-1:exon
so has part: feature:1046288-1046408:-1:exon
so has part: feature:1041209-1041263:-1:exon
so has part: feature:1038113-1038147:-1:exon
so has part: feature:1037904-1037974:-1:exon
so has part: feature:1023580-1023668:-1:exon
so has part: feature:1022214-1022340:-1:exon
so has part: feature:1008498-1008596:-1:exon
so has part: feature:1007644-1007863:-1:exon
so has part: feature:1006826-1006960:-1:exon
so has part: feature:1005661-1005756:-1:exon
so has part: feature:993904-994637:-1:exon
so has part: feature:991377-991425:-1:exon

XP_038956613.1
type: Protein
SIO_000068: ncbiprotein

position:991377:-1
position: 991377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103291-1103330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102902-1103007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102652-1102715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096192-1096300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072978-1073027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1067999-1068043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1048796-1048854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1046288-1046408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041209-1041263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1038113-1038147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1037904-1037974:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1023580-1023668:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1022214-1022340:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1008498-1008596:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1007644-1007863:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1006826-1006960:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1005661-1005756:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:993904-994637:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:991377-991425:-1:exon

Ddx3
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
alternative label: Ddx3y
gene: Ddx3
gene synonym: Ddx3y
note: DEAD (Asp-Glu-Ala-Asp) box polypeptide 3; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(1115095..1135754)
location: region:1115095-1135754:-1
so has part: feature:1115095-1135754:-1:exon
subclass of: SO_0000010

100312982
type: Gene
SIO_000068: ncbigene

2314437
type: RGD
SIO_000068: rgd

position:1115095:-1
position: 1115095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135754:-1
position: 1135754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115095-1135754:-1:exon

Ddx3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
alternative label: Ddx3y
gene: Ddx3
gene synonym: Ddx3y
product: DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_008773671.3
SIO_010081: Ddx3
subclass of: SO_0000673
so part of: Ddx3
location: complement(join(1115095..1117429,1117588..1117715,1118120..1118273,1119052..1119169,1119239..1119420,1119796..1119940,1120056..1120200,1120942..1121102,1121179..1121277,1121704..1121789,1122978..1123113,1124888..1124987,1125411..1125566,1126465..1126588,1126841..1126876,1129096..1129143,1132337..1132394,1135598..1135754))
location: region:1115095-1135754:-1
so has part: feature:1135598-1135754:-1:exon
so has part: feature:1132337-1132394:-1:exon
so has part: feature:1129096-1129143:-1:exon
so has part: feature:1126841-1126876:-1:exon
so has part: feature:1126465-1126588:-1:exon
so has part: feature:1125411-1125566:-1:exon
so has part: feature:1124888-1124987:-1:exon
so has part: feature:1122978-1123113:-1:exon
so has part: feature:1121704-1121789:-1:exon
so has part: feature:1121179-1121277:-1:exon
so has part: feature:1120942-1121102:-1:exon
so has part: feature:1120056-1120200:-1:exon
so has part: feature:1119796-1119940:-1:exon
so has part: feature:1119239-1119420:-1:exon
so has part: feature:1119052-1119169:-1:exon
so has part: feature:1118120-1118273:-1:exon
so has part: feature:1117588-1117715:-1:exon
so has part: feature:1115095-1117429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1135598-1135754:-1:exon

position:1135598:-1
position: 1135598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1132337-1132394:-1:exon

position:1132337:-1
position: 1132337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132394:-1
position: 1132394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1129096-1129143:-1:exon

position:1129096:-1
position: 1129096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1129143:-1
position: 1129143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1126841-1126876:-1:exon

position:1126841:-1
position: 1126841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126876:-1
position: 1126876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1126465-1126588:-1:exon

position:1126465:-1
position: 1126465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126588:-1
position: 1126588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1125411-1125566:-1:exon

position:1125411:-1
position: 1125411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125566:-1
position: 1125566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1124888-1124987:-1:exon

position:1124888:-1
position: 1124888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124987:-1
position: 1124987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1122978-1123113:-1:exon

position:1122978:-1
position: 1122978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123113:-1
position: 1123113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1121704-1121789:-1:exon

position:1121704:-1
position: 1121704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1121789:-1
position: 1121789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1121179-1121277:-1:exon

position:1121179:-1
position: 1121179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1121277:-1
position: 1121277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1120942-1121102:-1:exon

position:1120942:-1
position: 1120942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1121102:-1
position: 1121102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1120056-1120200:-1:exon

position:1120056:-1
position: 1120056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1120200:-1
position: 1120200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1119796-1119940:-1:exon

position:1119796:-1
position: 1119796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119940:-1
position: 1119940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1119239-1119420:-1:exon

position:1119239:-1
position: 1119239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119420:-1
position: 1119420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1119052-1119169:-1:exon

position:1119052:-1
position: 1119052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119169:-1
position: 1119169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1118120-1118273:-1:exon

position:1118120:-1
position: 1118120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118273:-1
position: 1118273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1117588-1117715:-1:exon

position:1117588:-1
position: 1117588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117715:-1
position: 1117715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1115095-1117429:-1:exon

position:1117429:-1
position: 1117429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ddx3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
alternative label: Ddx3y
gene: Ddx3
gene synonym: Ddx3y
product: DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_008773670.3
SIO_010081: Ddx3
subclass of: SO_0000673
so part of: Ddx3
location: complement(join(1115095..1117429,1117588..1117718,1118120..1118273,1119052..1119169,1119239..1119420,1119796..1119940,1120056..1120200,1120942..1121102,1121179..1121277,1121704..1121789,1122978..1123113,1124888..1124987,1125411..1125566,1126465..1126588,1126841..1126876,1129096..1129143,1132337..1132394,1135598..1135754))
location: region:1115095-1135754:-1
so has part: feature:1135598-1135754:-1:exon
so has part: feature:1132337-1132394:-1:exon
so has part: feature:1129096-1129143:-1:exon
so has part: feature:1126841-1126876:-1:exon
so has part: feature:1126465-1126588:-1:exon
so has part: feature:1125411-1125566:-1:exon
so has part: feature:1124888-1124987:-1:exon
so has part: feature:1122978-1123113:-1:exon
so has part: feature:1121704-1121789:-1:exon
so has part: feature:1121179-1121277:-1:exon
so has part: feature:1120942-1121102:-1:exon
so has part: feature:1120056-1120200:-1:exon
so has part: feature:1119796-1119940:-1:exon
so has part: feature:1119239-1119420:-1:exon
so has part: feature:1119052-1119169:-1:exon
so has part: feature:1118120-1118273:-1:exon
so has part: feature:1117588-1117718:-1:exon
so has part: feature:1115095-1117429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1135598-1135754:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132337-1132394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1129096-1129143:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1126841-1126876:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1126465-1126588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1125411-1125566:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1124888-1124987:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1122978-1123113:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1121704-1121789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1121179-1121277:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1120942-1121102:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1120056-1120200:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1119796-1119940:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1119239-1119420:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1119052-1119169:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1118120-1118273:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1117588-1117718:-1:exon

position:1117718:-1
position: 1117718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1115095-1117429:-1:exon

Ddx3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
alternative label: Ddx3y
gene: Ddx3
gene synonym: Ddx3y
product: DEAD (Asp-Glu-Ala-Asp) box polypeptide 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001167665.2
SIO_010081: Ddx3
subclass of: SO_0000673
so part of: Ddx3
location: complement(join(1116297..1117429,1117588..1117718,1118120..1118273,1119052..1119169,1119239..1119420,1119796..1119940,1120056..1120200,1120942..1121102,1121179..1121277,1121704..1121789,1122978..1123113,1124888..1124987,1125411..1125566,1126465..1126588,1129096..1129143,1132337..1132394,1135598..1135706))
location: region:1116297-1135706:-1
so has part: feature:1135598-1135706:-1:exon
so has part: feature:1132337-1132394:-1:exon
so has part: feature:1129096-1129143:-1:exon
so has part: feature:1126465-1126588:-1:exon
so has part: feature:1125411-1125566:-1:exon
so has part: feature:1124888-1124987:-1:exon
so has part: feature:1122978-1123113:-1:exon
so has part: feature:1121704-1121789:-1:exon
so has part: feature:1121179-1121277:-1:exon
so has part: feature:1120942-1121102:-1:exon
so has part: feature:1120056-1120200:-1:exon
so has part: feature:1119796-1119940:-1:exon
so has part: feature:1119239-1119420:-1:exon
so has part: feature:1119052-1119169:-1:exon
so has part: feature:1118120-1118273:-1:exon
so has part: feature:1117588-1117718:-1:exon
so has part: feature:1116297-1117429:-1:exon

position:1116297:-1
position: 1116297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135706:-1
position: 1135706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1135598-1135706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132337-1132394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1129096-1129143:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1126465-1126588:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1125411-1125566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1124888-1124987:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1122978-1123113:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1121704-1121789:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1121179-1121277:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1120942-1121102:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1120056-1120200:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1119796-1119940:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1119239-1119420:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1119052-1119169:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1118120-1118273:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1117588-1117718:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1116297-1117429:-1:exon

Ddx3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
alternative label: Ddx3y
gene: Ddx3
gene synonym: Ddx3y
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ATP-dependent RNA helicase DDX3Y
translation: MAAENTVGLDQQFAGLDMNSDNQNGGVSTESKGRYIPPHLRNRETSKGVCDKDNSGWSKDKDAYSSFGSRDSRGKPNYFSDRGSGSRGRFDDPGRSDYDCIASRDRSGFGKFERSGYSRWGDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIENFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLLVEAKQEVPSWLESMAYEHHYKGNSRGRSKSRFSGGFGARDYRQSSGYANSGFNNNRANSSRTSGSTHNRGFGGGGYGGFYSNEGYGGNYNSQAVDWWGN
SIO_010081: Ddx3
subclass of: SO_0000673
so part of: Ddx3
location: complement(join(1117350..1117429,1117588..1117718,1118120..1118273,1119052..1119169,1119239..1119420,1119796..1119940,1120056..1120200,1120942..1121102,1121179..1121277,1121704..1121789,1122978..1123113,1124888..1124987,1125411..1125566,1126465..1126588,1129096..1129143,1132337..1132394,1135598..1135633))
location: region:1117350-1135633:-1
so has part: feature:1135598-1135633:-1:exon
so has part: feature:1132337-1132394:-1:exon
so has part: feature:1129096-1129143:-1:exon
so has part: feature:1126465-1126588:-1:exon
so has part: feature:1125411-1125566:-1:exon
so has part: feature:1124888-1124987:-1:exon
so has part: feature:1122978-1123113:-1:exon
so has part: feature:1121704-1121789:-1:exon
so has part: feature:1121179-1121277:-1:exon
so has part: feature:1120942-1121102:-1:exon
so has part: feature:1120056-1120200:-1:exon
so has part: feature:1119796-1119940:-1:exon
so has part: feature:1119239-1119420:-1:exon
so has part: feature:1119052-1119169:-1:exon
so has part: feature:1118120-1118273:-1:exon
so has part: feature:1117588-1117718:-1:exon
so has part: feature:1117350-1117429:-1:exon

NP_001161137.2
type: Protein
SIO_000068: ncbiprotein

position:1117350:-1
position: 1117350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135633:-1
position: 1135633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1135598-1135633:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132337-1132394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1129096-1129143:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1126465-1126588:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1125411-1125566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1124888-1124987:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1122978-1123113:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1121704-1121789:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1121179-1121277:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1120942-1121102:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1120056-1120200:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1119796-1119940:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1119239-1119420:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1119052-1119169:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1118120-1118273:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1117588-1117718:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1117350-1117429:-1:exon

Ddx3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
alternative label: Ddx3y
gene: Ddx3
gene synonym: Ddx3y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX3Y isoform X2
translation: MAAENTVGLDQQFAGLDMNSDNQNGGVSTESKGRYIPPHLRNRETSKELRTKPRALCVLGVCDKDNSGWSKDKDAYSSFGSRDSRGKPNYFSDRGSGSRGRFDDPGRSDYDCIASRDRSGFGKFERSGYSRWGDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIENFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLLVEAKQEVPSWLESMAYEHHYKGNSRGRSKRFSGGFGARDYRQSSGYANSGFNNNRANSSRTSGSTHNRGFGGGGYGGFYSNEGYGGNYNSQAVDWWGN
SIO_010081: Ddx3
subclass of: SO_0000673
so part of: Ddx3
location: complement(join(1117350..1117429,1117588..1117715,1118120..1118273,1119052..1119169,1119239..1119420,1119796..1119940,1120056..1120200,1120942..1121102,1121179..1121277,1121704..1121789,1122978..1123113,1124888..1124987,1125411..1125566,1126465..1126588,1126841..1126876,1129096..1129143,1132337..1132394,1135598..1135633))
location: region:1117350-1135633:-1
so has part: feature:1135598-1135633:-1:exon
so has part: feature:1132337-1132394:-1:exon
so has part: feature:1129096-1129143:-1:exon
so has part: feature:1126841-1126876:-1:exon
so has part: feature:1126465-1126588:-1:exon
so has part: feature:1125411-1125566:-1:exon
so has part: feature:1124888-1124987:-1:exon
so has part: feature:1122978-1123113:-1:exon
so has part: feature:1121704-1121789:-1:exon
so has part: feature:1121179-1121277:-1:exon
so has part: feature:1120942-1121102:-1:exon
so has part: feature:1120056-1120200:-1:exon
so has part: feature:1119796-1119940:-1:exon
so has part: feature:1119239-1119420:-1:exon
so has part: feature:1119052-1119169:-1:exon
so has part: feature:1118120-1118273:-1:exon
so has part: feature:1117588-1117715:-1:exon
so has part: feature:1117350-1117429:-1:exon

XP_008771893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1135598-1135633:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132337-1132394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1129096-1129143:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1126841-1126876:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1126465-1126588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1125411-1125566:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1124888-1124987:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1122978-1123113:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1121704-1121789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1121179-1121277:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1120942-1121102:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1120056-1120200:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1119796-1119940:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1119239-1119420:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1119052-1119169:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1118120-1118273:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1117588-1117715:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1117350-1117429:-1:exon

Ddx3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
alternative label: Ddx3y
gene: Ddx3
gene synonym: Ddx3y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX3Y isoform X1
translation: MAAENTVGLDQQFAGLDMNSDNQNGGVSTESKGRYIPPHLRNRETSKELRTKPRALCVLGVCDKDNSGWSKDKDAYSSFGSRDSRGKPNYFSDRGSGSRGRFDDPGRSDYDCIASRDRSGFGKFERSGYSRWGDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIENFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLLVEAKQEVPSWLESMAYEHHYKGNSRGRSKSRFSGGFGARDYRQSSGYANSGFNNNRANSSRTSGSTHNRGFGGGGYGGFYSNEGYGGNYNSQAVDWWGN
SIO_010081: Ddx3
subclass of: SO_0000673
so part of: Ddx3
location: complement(join(1117350..1117429,1117588..1117718,1118120..1118273,1119052..1119169,1119239..1119420,1119796..1119940,1120056..1120200,1120942..1121102,1121179..1121277,1121704..1121789,1122978..1123113,1124888..1124987,1125411..1125566,1126465..1126588,1126841..1126876,1129096..1129143,1132337..1132394,1135598..1135633))
location: region:1117350-1135633:-1
so has part: feature:1135598-1135633:-1:exon
so has part: feature:1132337-1132394:-1:exon
so has part: feature:1129096-1129143:-1:exon
so has part: feature:1126841-1126876:-1:exon
so has part: feature:1126465-1126588:-1:exon
so has part: feature:1125411-1125566:-1:exon
so has part: feature:1124888-1124987:-1:exon
so has part: feature:1122978-1123113:-1:exon
so has part: feature:1121704-1121789:-1:exon
so has part: feature:1121179-1121277:-1:exon
so has part: feature:1120942-1121102:-1:exon
so has part: feature:1120056-1120200:-1:exon
so has part: feature:1119796-1119940:-1:exon
so has part: feature:1119239-1119420:-1:exon
so has part: feature:1119052-1119169:-1:exon
so has part: feature:1118120-1118273:-1:exon
so has part: feature:1117588-1117718:-1:exon
so has part: feature:1117350-1117429:-1:exon

XP_008771892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1135598-1135633:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132337-1132394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1129096-1129143:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1126841-1126876:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1126465-1126588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1125411-1125566:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1124888-1124987:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1122978-1123113:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1121704-1121789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1121179-1121277:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1120942-1121102:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1120056-1120200:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1119796-1119940:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1119239-1119420:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1119052-1119169:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1118120-1118273:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1117588-1117718:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1117350-1117429:-1:exon

Usp9y
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: Usp9y
note: ubiquitin specific peptidase 9, Y-linked; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(1156135..1300965)
location: region:1156135-1300965:-1
so has part: feature:1156135-1300965:-1:exon
subclass of: SO_0000010

103694559
type: Gene
SIO_000068: ncbigene

9087771
type: RGD
SIO_000068: rgd

position:1156135:-1
position: 1156135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1300965:-1
position: 1300965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156135-1300965:-1:exon

Usp9y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Usp9y
product: ubiquitin specific peptidase 9, Y-linked
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001329902.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001329902.1
SIO_010081: Usp9y
subclass of: SO_0000673
so part of: Usp9y
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urn:…
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SIO_000300: 43
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urn:…
SIO_000300: 44
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urn:…
SIO_000300: 45
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SIO_000300: 46
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Usp9y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Usp9y
product: ubiquitin specific peptidase 9, Y-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039100657.1
SIO_010081: Usp9y
subclass of: SO_0000673
so part of: Usp9y
location: complement(join(1157742..1157993,1160934..1161029,1161826..1162038,1162713..1162869,1164859..1164947,1165028..1165248,1166380..1166565,1168548..1168677,1169370..1169604,1174620..1174743,1175128..1175875,1177834..1177975,1179424..1179597,1188378..1188568,1189682..1189893,1196837..1197059,1197657..1197803,1199188..1199334,1199530..1199638,1200914..1201083,1202341..1202466,1202642..1202767,1205767..1206045,1206253..1206383,1220687..1220807,1228734..1228886,1229926..1230166,1235327..1235541,1237025..1237120,1237899..1238241,1239520..1239607,1246218..1246351,1247863..1247999,1255827..1256033,1259469..1259573,1263453..1263605,1265094..1265229,1265602..1265853,1268764..1268879,1280258..1280476,1282601..1282713,1285060..1285139,1287115..1287260,1295456..1295586,1300610..1300965))
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position:1157742:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1300610-1300965:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1295456-1295586:-1:exon

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SIO_000628: feature:1287115-1287260:-1:exon

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SIO_000628: feature:1265602-1265853:-1:exon

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SIO_000628: feature:1265094-1265229:-1:exon

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SIO_000300: 10
SIO_000628: feature:1263453-1263605:-1:exon

urn:…
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SIO_000628: feature:1259469-1259573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1255827-1256033:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1247863-1247999:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1246218-1246351:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1239520-1239607:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1237899-1238241:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1237025-1237120:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1235327-1235541:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1229926-1230166:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1228734-1228886:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1220687-1220807:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1206253-1206383:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1205767-1206045:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1202642-1202767:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1202341-1202466:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1200914-1201083:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1199530-1199638:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1199188-1199334:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1197657-1197803:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1196837-1197059:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1189682-1189893:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1188378-1188568:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1179424-1179597:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1177834-1177975:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1175128-1175875:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1174620-1174743:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1169370-1169604:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1168548-1168677:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1166380-1166565:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1165028-1165248:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1164859-1164947:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1162713-1162869:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1161826-1162038:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1160934-1161029:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1157742-1157993:-1:exon

Usp9y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: Usp9y
product: ubiquitin specific peptidase 9, Y-linked, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039100658.1
SIO_010081: Usp9y
subclass of: SO_0000673
so part of: Usp9y
location: complement(join(1157742..1157993,1160934..1161029,1161826..1162038,1162713..1162869,1164859..1164947,1165028..1165248,1166380..1166565,1168548..1168677,1169370..1169604,1174620..1174743,1175128..1175875,1177834..1177975,1179424..1179597,1188378..1188568,1189682..1189893,1196837..1197059,1197657..1197803,1199188..1199334,1199530..1199638,1200914..1201083,1202341..1202466,1202642..1202767,1205767..1206045,1206253..1206383,1220687..1220807,1228734..1228886,1229926..1230166,1235327..1235541,1237025..1237120,1237899..1238241,1239520..1239607,1246218..1246351,1247863..1247999,1255827..1256033,1259469..1259573,1263453..1263605,1265094..1265229,1265602..1265853,1268764..1268879,1280258..1280476,1282601..1282713,1285060..1285139,1287115..1287233,1295456..1295586,1299234..1299280,1300610..1300965))
location: region:1157742-1300965:-1
so has part: feature:1300610-1300965:-1:exon
so has part: feature:1299234-1299280:-1:exon
so has part: feature:1295456-1295586:-1:exon
so has part: feature:1287115-1287233:-1:exon
so has part: feature:1285060-1285139:-1:exon
so has part: feature:1282601-1282713:-1:exon
so has part: feature:1280258-1280476:-1:exon
so has part: feature:1268764-1268879:-1:exon
so has part: feature:1265602-1265853:-1:exon
so has part: feature:1265094-1265229:-1:exon
so has part: feature:1263453-1263605:-1:exon
so has part: feature:1259469-1259573:-1:exon
so has part: feature:1255827-1256033:-1:exon
so has part: feature:1247863-1247999:-1:exon
so has part: feature:1246218-1246351:-1:exon
so has part: feature:1239520-1239607:-1:exon
so has part: feature:1237899-1238241:-1:exon
so has part: feature:1237025-1237120:-1:exon
so has part: feature:1235327-1235541:-1:exon
so has part: feature:1229926-1230166:-1:exon
so has part: feature:1228734-1228886:-1:exon
so has part: feature:1220687-1220807:-1:exon
so has part: feature:1206253-1206383:-1:exon
so has part: feature:1205767-1206045:-1:exon
so has part: feature:1202642-1202767:-1:exon
so has part: feature:1202341-1202466:-1:exon
so has part: feature:1200914-1201083:-1:exon
so has part: feature:1199530-1199638:-1:exon
so has part: feature:1199188-1199334:-1:exon
so has part: feature:1197657-1197803:-1:exon
so has part: feature:1196837-1197059:-1:exon
so has part: feature:1189682-1189893:-1:exon
so has part: feature:1188378-1188568:-1:exon
so has part: feature:1179424-1179597:-1:exon
so has part: feature:1177834-1177975:-1:exon
so has part: feature:1175128-1175875:-1:exon
so has part: feature:1174620-1174743:-1:exon
so has part: feature:1169370-1169604:-1:exon
so has part: feature:1168548-1168677:-1:exon
so has part: feature:1166380-1166565:-1:exon
so has part: feature:1165028-1165248:-1:exon
so has part: feature:1164859-1164947:-1:exon
so has part: feature:1162713-1162869:-1:exon
so has part: feature:1161826-1162038:-1:exon
so has part: feature:1160934-1161029:-1:exon
so has part: feature:1157742-1157993:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300610-1300965:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299234-1299280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1295456-1295586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1287115-1287233:-1:exon

position:1287233:-1
position: 1287233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1285060-1285139:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1282601-1282713:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1280258-1280476:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1268764-1268879:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1265602-1265853:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1265094-1265229:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1263453-1263605:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1259469-1259573:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1255827-1256033:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1247863-1247999:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1246218-1246351:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1239520-1239607:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1237899-1238241:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1237025-1237120:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1235327-1235541:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1229926-1230166:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1228734-1228886:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1220687-1220807:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1206253-1206383:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1205767-1206045:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1202642-1202767:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1202341-1202466:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1200914-1201083:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1199530-1199638:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1199188-1199334:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1197657-1197803:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1196837-1197059:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1189682-1189893:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1188378-1188568:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1179424-1179597:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1177834-1177975:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1175128-1175875:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1174620-1174743:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1169370-1169604:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1168548-1168677:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1166380-1166565:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1165028-1165248:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1164859-1164947:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1162713-1162869:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1161826-1162038:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1160934-1161029:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1157742-1157993:-1:exon

Usp9y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Usp9y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin specific peptidase 9, Y-linked isoform X2
translation: MTVTTRGSPVGENESQGQAPDGQSQPSFQQNQNSPATPPDEQGQGDAPPQHEEEDPTFPHADLAKLEDMINRPRWVVPVLPKGELEVLLEASIDLTKKGIDAKSEACQRFFRDVLTVSFTKILTDEAVSGWKFEIHRCIINNTHRLMELCVAKLSQDWFPFLELLAIALNPHCKFHVYNGARPCESVSSSVQFPEDELFACSPDLRSPKGWLVDLINTFGTLNGFQILHDRFISGSALNVQTIAALIKPFGQCCEYLTQHTLKKYFIPVIEVVPQLLQKLTNEELKKEAKTEVKNDAISMIIKFLKNLASRIPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINKVLSSVSYYTHRHGNSEEEWLTAERMAEWIQQNNILSIVLQDSLHQPQYVEKLEKILRFVIKEKALTLQDLNNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAQKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDCFIEEFRTNNKWVIPALKQIKEICSLFGEAPQNLSQTHRSPHVFYRHDLISQLQHNHALVTLVAENLATYMNSIRLYARDHEDYDPQTIRLGSRYSHVQEVQERLNFLRFLLKDGQLWLCASQAKQIWHCLAENAVYFSDREACFMWYSKLMGDEPDLDPDINKEFFESNVLQLDPSLLTENGIKCFERFFKTVNCREGKLMIKRKVYMMDDLDLIGLDYLWKVVIQSNDDISNRAIDLLKEIYTSLGPRLQANQVVIHEDFIQSCFDRMKSSYDTLHVLDSDKDNIFSCARQEAIRIVRILTVLREYISECDSDYHEERMILPMSRAFRGKHLSLTVRFPNQSKEVDDLDILSHTNATIGSVRRCILNRINANVTHTKIELFIGGELIDSEDDRKLVEQLNLKDKSLITAKFLQINSNMPSSPDSSSDSSAGSPGNHCHNNYRDVPNSEMENCLPGVIMSLQPRYVSFLWQVADLGSMLTMPTLRDGARILMKLMPPDNTTIENLRAVCSDHLNLGERRLGQSLHSLFFGSSASKVLYLTEVVYILLMPAGAHLADISSDFQYHFLKNGGLPLVLSMLIQNNFLPNTDVETRRDAYFSALKIAKLLLTTIGYGHVQAIAEACQPVADGTDPKTPINQATHDQAVVLQNALQSIPNPSSECMLRNVSIRLAHQISGLASRYIPDICVIRAIQKIIWTSGCGSLELVFSPHEDITKTYKMTTSTRSNPEVKDEQVCCEALEVMTLCFALIPTALDSLSKEKAWQSFVIDLLLYCPSKTIRQLAQEQFFLICTRCCMGHRPLLFFITLLFTILGSAATEKGKHSDVYFPLLRRLLTYAYNSNIHIPNVDVLLNDEINWLKRVRDYIKNTGETSVEDPILEGHLGVTKELLSFQTPDKKYHIGCKAGGANLVKELIDDFIFPASKAYLQYSRSGEMPNKQTIPVCGSPATVNAGFELLVALAFGCVRNLKQIVNCLTEMFYIGTPVNTLAEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIENIWNDTDDDTFKDERQDSENNIDPRDDVFGYPHQFEDKPTLNKAEDRKDYNIGVLKHLQITFGHLAASQLQYYVPRGFWQQFRLWGEPVNLREQHDALEFFNSLVDSLDEAFKALGHPTLLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSLEQYIKGDLLEGANAYHCEKCDKKVDTVKRLLIKKLPSVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGATKLEGDGVHPQTQLIKQNEQSENVVPGSTKYRLVGVLVHSGQANGGHYYSYIIQRNGKDNNRGRWFKFDDGDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDITDEDNEMITYLSELTITRPHQIMSPAIERSVWKQNVQFLHNQMQFSLEYFQF…
SIO_010081: Usp9y
subclass of: SO_0000673
so part of: Usp9y
location: complement(join(1157862..1157993,1160934..1161029,1161826..1162038,1162713..1162869,1164859..1164947,1165028..1165248,1166380..1166565,1168548..1168677,1169370..1169604,1174620..1174743,1175128..1175875,1177834..1177975,1179424..1179597,1188378..1188568,1189682..1189893,1196837..1197059,1197657..1197803,1199188..1199334,1199530..1199638,1200914..1201083,1202341..1202466,1202642..1202767,1205767..1206045,1206253..1206383,1220687..1220807,1228734..1228886,1229926..1230166,1235327..1235541,1237025..1237120,1237899..1238241,1239520..1239607,1246218..1246351,1247863..1247999,1255827..1256033,1259469..1259573,1263453..1263605,1265094..1265229,1265602..1265853,1268764..1268879,1280258..1280476,1282601..1282713,1285060..1285139,1287115..1287233,1295456..1295551))
location: region:1157862-1295551:-1
so has part: feature:1295456-1295551:-1:exon
so has part: feature:1287115-1287233:-1:exon
so has part: feature:1285060-1285139:-1:exon
so has part: feature:1282601-1282713:-1:exon
so has part: feature:1280258-1280476:-1:exon
so has part: feature:1268764-1268879:-1:exon
so has part: feature:1265602-1265853:-1:exon
so has part: feature:1265094-1265229:-1:exon
so has part: feature:1263453-1263605:-1:exon
so has part: feature:1259469-1259573:-1:exon
so has part: feature:1255827-1256033:-1:exon
so has part: feature:1247863-1247999:-1:exon
so has part: feature:1246218-1246351:-1:exon
so has part: feature:1239520-1239607:-1:exon
so has part: feature:1237899-1238241:-1:exon
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so has part: feature:1228734-1228886:-1:exon
so has part: feature:1220687-1220807:-1:exon
so has part: feature:1206253-1206383:-1:exon
so has part: feature:1205767-1206045:-1:exon
so has part: feature:1202642-1202767:-1:exon
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so has part: feature:1200914-1201083:-1:exon
so has part: feature:1199530-1199638:-1:exon
so has part: feature:1199188-1199334:-1:exon
so has part: feature:1197657-1197803:-1:exon
so has part: feature:1196837-1197059:-1:exon
so has part: feature:1189682-1189893:-1:exon
so has part: feature:1188378-1188568:-1:exon
so has part: feature:1179424-1179597:-1:exon
so has part: feature:1177834-1177975:-1:exon
so has part: feature:1175128-1175875:-1:exon
so has part: feature:1174620-1174743:-1:exon
so has part: feature:1169370-1169604:-1:exon
so has part: feature:1168548-1168677:-1:exon
so has part: feature:1166380-1166565:-1:exon
so has part: feature:1165028-1165248:-1:exon
so has part: feature:1164859-1164947:-1:exon
so has part: feature:1162713-1162869:-1:exon
so has part: feature:1161826-1162038:-1:exon
so has part: feature:1160934-1161029:-1:exon
so has part: feature:1157862-1157993:-1:exon

XP_038956586.1
type: Protein
SIO_000068: ncbiprotein

position:1157862:-1
position: 1157862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295551:-1
position: 1295551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295456-1295551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287115-1287233:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285060-1285139:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1282601-1282713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1280258-1280476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1268764-1268879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1265602-1265853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1265094-1265229:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1263453-1263605:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1259469-1259573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1255827-1256033:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1247863-1247999:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1246218-1246351:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1239520-1239607:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1237899-1238241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1237025-1237120:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1235327-1235541:-1:exon

urn:…
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SIO_000628: feature:1229926-1230166:-1:exon

urn:…
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SIO_000628: feature:1228734-1228886:-1:exon

urn:…
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SIO_000628: feature:1220687-1220807:-1:exon

urn:…
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SIO_000628: feature:1206253-1206383:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1205767-1206045:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1202642-1202767:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1202341-1202466:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1200914-1201083:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1199530-1199638:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1199188-1199334:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1197657-1197803:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1196837-1197059:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1189682-1189893:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1188378-1188568:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1179424-1179597:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1177834-1177975:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1175128-1175875:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1174620-1174743:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1169370-1169604:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1168548-1168677:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1166380-1166565:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1165028-1165248:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1164859-1164947:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1162713-1162869:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1161826-1162038:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1160934-1161029:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1157862-1157993:-1:exon

Usp9y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Usp9y
inference: similar to AA sequence (same species):RefSeq:NP_001316831.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ubiquitin specific peptidase 9, Y-linked
translation: MTVTTRGSPVGENESQGQAPDGQSQPSFQQNQISSSDSSNENSPATPPDEQGQGDAPPQHEEEDPTFPHADLAKLEDMINRPRWVVPVLPKGELEVLLEASIDLTKKGIDAKSEACQRFFRDVLTVSFTKILTDEAVSGWKFEIHRCIINNTHRLMELCVAKLSQDWFPFLELLAIALNPHCKFHVYNGARPCESVSSSVQFPEDELFACSPDLRSPKGWLVDLINTFGTLNGFQILHDRFISGSALNVQTIAALIKPFGQCCEYLTQHTLKKYFIPVIEVVPQLLQKLTNEELKKEAKTEVKNDAISMIIKFLKNLASRIPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINKVLSSVSYYTHRHGNSEEEWLTAERMAEWIQQNNILSIVLQDSLHQPQYVEKLEKILRFVIKEKALTLQDLNNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAQKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDCFIEEFRTNNKWVIPALKQIKEICSLFGEAPQNLSQTHRSPHVFYRHDLISQLQHNHALVTLVAENLATYMNSIRLYARDHEDYDPQTIRLGSRYSHVQEVQERLNFLRFLLKDGQLWLCASQAKQIWHCLAENAVYFSDREACFMWYSKLMGDEPDLDPDINKEFFESNVLQLDPSLLTENGIKCFERFFKTVNCREGKLMIKRKVYMMDDLDLIGLDYLWKVVIQSNDDISNRAIDLLKEIYTSLGPRLQANQVVIHEDFIQSCFDRMKSSYDTLHVLDSDKDNIFSCARQEAIRIVRILTVLREYISECDSDYHEERMILPMSRAFRGKHLSLTVRFPNQSKEVDDLDILSHTNATIGSVRRCILNRINANVTHTKIELFIGGELIDSEDDRKLVEQLNLKDKSLITAKFLQINSNMPSSPDSSSDSSAGSPGNHCHNNYRDVPNSEMENCLPGVIMSLQPRYISFLWQVADLGSMLTMPTLRDGARILMKLMPPDNTTIENLRAVCSDHLNLGERRLGQSLHSLFFGSSASKVLYLTEVVYILLMPAGAHLADISSDFQYHFLKNGGLPLVLSMLIQNNFLPNTDVETRRDAYFSALKIAKLLLTTIGYGHVQAIAEACQPVADGTDPKTPINQATHDQAVVLQNALQSIPNPSSECMLRNVSIRLAHQISGLASRYIPDICVIRAIQKIIWTSGCGSLELVFSPHEDITKTYKMTTSTRSNPEVKDEQVCCEALEVMTLCFALIPTALDSLSKEKAWQSFVIDLLLYCPSKTIRQLAQEQFFLICTRCCMGHRPLLFFITLLFTILGSAATEKGKHSDVYFPLLRRLLTYAYNSNIHIPNVDVLLNDEINWLKRVRDYIKNTGETSVEDPILEGHLGVTKELLSFQTPDKKYHIGCKAGGANLVKELIDDFIFPASKAYLQYSRSGEMPNKQTIPVCGSPATVNAGFELLVALAFGCVRNLKQIVNCLTEMFYIGTPVNTLAEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIENIWNDTDDDTFKDERQDSENNIDPRDDVFGYPHQFEDKPTLNKAEDRKDYNIGVLKHLQITFGHLAASQLQYYVPRGFWQQFRLWGEPVNLREQHDALEFFNSLVDSLDEAFKALGHPTLLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSLEQYIKGDLLEGANAYHCEKCDKKVDTVKRLLIKKLPSVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGATKLEGDGVHPQTQLIKQNEQSENVVPGSTKYRLVGVLVHSGQANGGHYYSYIIQRNGKDNNRGRWFKFDDGDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDITDEDNEMITYLSELTITRPHQIMSPAIERSVWKQNVQFLHNQM…
SIO_010081: Usp9y
subclass of: SO_0000673
so part of: Usp9y
location: complement(join(1157862..1157993,1160934..1161029,1161826..1162038,1162713..1162869,1164859..1164947,1165028..1165248,1166380..1166565,1168548..1168677,1169370..1169604,1174620..1174743,1175128..1175875,1177834..1177975,1179424..1179597,1188378..1188568,1189682..1189893,1196837..1197059,1197657..1197803,1199188..1199334,1199530..1199638,1200914..1201083,1202341..1202466,1202642..1202767,1205767..1206045,1206253..1206383,1220687..1220807,1228734..1228886,1229926..1230166,1235327..1235541,1237025..1237120,1237899..1238241,1239520..1239607,1246218..1246351,1247863..1247999,1255827..1256033,1259469..1259573,1263453..1263605,1265094..1265229,1265602..1265853,1268764..1268879,1280258..1280476,1282601..1282713,1285060..1285139,1287115..1287260,1295456..1295551))
location: region:1157862-1295551:-1
so has part: feature:1295456-1295551:-1:exon
so has part: feature:1287115-1287260:-1:exon
so has part: feature:1285060-1285139:-1:exon
so has part: feature:1282601-1282713:-1:exon
so has part: feature:1280258-1280476:-1:exon
so has part: feature:1268764-1268879:-1:exon
so has part: feature:1265602-1265853:-1:exon
so has part: feature:1265094-1265229:-1:exon
so has part: feature:1263453-1263605:-1:exon
so has part: feature:1259469-1259573:-1:exon
so has part: feature:1255827-1256033:-1:exon
so has part: feature:1247863-1247999:-1:exon
so has part: feature:1246218-1246351:-1:exon
so has part: feature:1239520-1239607:-1:exon
so has part: feature:1237899-1238241:-1:exon
so has part: feature:1237025-1237120:-1:exon
so has part: feature:1235327-1235541:-1:exon
so has part: feature:1229926-1230166:-1:exon
so has part: feature:1228734-1228886:-1:exon
so has part: feature:1220687-1220807:-1:exon
so has part: feature:1206253-1206383:-1:exon
so has part: feature:1205767-1206045:-1:exon
so has part: feature:1202642-1202767:-1:exon
so has part: feature:1202341-1202466:-1:exon
so has part: feature:1200914-1201083:-1:exon
so has part: feature:1199530-1199638:-1:exon
so has part: feature:1199188-1199334:-1:exon
so has part: feature:1197657-1197803:-1:exon
so has part: feature:1196837-1197059:-1:exon
so has part: feature:1189682-1189893:-1:exon
so has part: feature:1188378-1188568:-1:exon
so has part: feature:1179424-1179597:-1:exon
so has part: feature:1177834-1177975:-1:exon
so has part: feature:1175128-1175875:-1:exon
so has part: feature:1174620-1174743:-1:exon
so has part: feature:1169370-1169604:-1:exon
so has part: feature:1168548-1168677:-1:exon
so has part: feature:1166380-1166565:-1:exon
so has part: feature:1165028-1165248:-1:exon
so has part: feature:1164859-1164947:-1:exon
so has part: feature:1162713-1162869:-1:exon
so has part: feature:1161826-1162038:-1:exon
so has part: feature:1160934-1161029:-1:exon
so has part: feature:1157862-1157993:-1:exon

NP_001316831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1295456-1295551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287115-1287260:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285060-1285139:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1282601-1282713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1280258-1280476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1268764-1268879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1265602-1265853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1265094-1265229:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1263453-1263605:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1259469-1259573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1255827-1256033:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1247863-1247999:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1246218-1246351:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1239520-1239607:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1237899-1238241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1237025-1237120:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1235327-1235541:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1229926-1230166:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1228734-1228886:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1220687-1220807:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1206253-1206383:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1205767-1206045:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1202642-1202767:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1202341-1202466:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1200914-1201083:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1199530-1199638:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1199188-1199334:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1197657-1197803:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1196837-1197059:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1189682-1189893:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1188378-1188568:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1179424-1179597:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1177834-1177975:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1175128-1175875:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1174620-1174743:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1169370-1169604:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1168548-1168677:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1166380-1166565:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1165028-1165248:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1164859-1164947:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1162713-1162869:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1161826-1162038:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1160934-1161029:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1157862-1157993:-1:exon

Usp9y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: Usp9y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin specific peptidase 9, Y-linked isoform X1
translation: MTVTTRGSPVGENESQGQAPDGQSQPSFQQNQISSSDSSNENSPATPPDEQGQGDAPPQHEEEDPTFPHADLAKLEDMINRPRWVVPVLPKGELEVLLEASIDLTKKGIDAKSEACQRFFRDVLTVSFTKILTDEAVSGWKFEIHRCIINNTHRLMELCVAKLSQDWFPFLELLAIALNPHCKFHVYNGARPCESVSSSVQFPEDELFACSPDLRSPKGWLVDLINTFGTLNGFQILHDRFISGSALNVQTIAALIKPFGQCCEYLTQHTLKKYFIPVIEVVPQLLQKLTNEELKKEAKTEVKNDAISMIIKFLKNLASRIPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINKVLSSVSYYTHRHGNSEEEWLTAERMAEWIQQNNILSIVLQDSLHQPQYVEKLEKILRFVIKEKALTLQDLNNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAQKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDCFIEEFRTNNKWVIPALKQIKEICSLFGEAPQNLSQTHRSPHVFYRHDLISQLQHNHALVTLVAENLATYMNSIRLYARDHEDYDPQTIRLGSRYSHVQEVQERLNFLRFLLKDGQLWLCASQAKQIWHCLAENAVYFSDREACFMWYSKLMGDEPDLDPDINKEFFESNVLQLDPSLLTENGIKCFERFFKTVNCREGKLMIKRKVYMMDDLDLIGLDYLWKVVIQSNDDISNRAIDLLKEIYTSLGPRLQANQVVIHEDFIQSCFDRMKSSYDTLHVLDSDKDNIFSCARQEAIRIVRILTVLREYISECDSDYHEERMILPMSRAFRGKHLSLTVRFPNQSKEVDDLDILSHTNATIGSVRRCILNRINANVTHTKIELFIGGELIDSEDDRKLVEQLNLKDKSLITAKFLQINSNMPSSPDSSSDSSAGSPGNHCHNNYRDVPNSEMENCLPGVIMSLQPRYVSFLWQVADLGSMLTMPTLRDGARILMKLMPPDNTTIENLRAVCSDHLNLGERRLGQSLHSLFFGSSASKVLYLTEVVYILLMPAGAHLADISSDFQYHFLKNGGLPLVLSMLIQNNFLPNTDVETRRDAYFSALKIAKLLLTTIGYGHVQAIAEACQPVADGTDPKTPINQATHDQAVVLQNALQSIPNPSSECMLRNVSIRLAHQISGLASRYIPDICVIRAIQKIIWTSGCGSLELVFSPHEDITKTYKMTTSTRSNPEVKDEQVCCEALEVMTLCFALIPTALDSLSKEKAWQSFVIDLLLYCPSKTIRQLAQEQFFLICTRCCMGHRPLLFFITLLFTILGSAATEKGKHSDVYFPLLRRLLTYAYNSNIHIPNVDVLLNDEINWLKRVRDYIKNTGETSVEDPILEGHLGVTKELLSFQTPDKKYHIGCKAGGANLVKELIDDFIFPASKAYLQYSRSGEMPNKQTIPVCGSPATVNAGFELLVALAFGCVRNLKQIVNCLTEMFYIGTPVNTLAEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIENIWNDTDDDTFKDERQDSENNIDPRDDVFGYPHQFEDKPTLNKAEDRKDYNIGVLKHLQITFGHLAASQLQYYVPRGFWQQFRLWGEPVNLREQHDALEFFNSLVDSLDEAFKALGHPTLLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSLEQYIKGDLLEGANAYHCEKCDKKVDTVKRLLIKKLPSVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGATKLEGDGVHPQTQLIKQNEQSENVVPGSTKYRLVGVLVHSGQANGGHYYSYIIQRNGKDNNRGRWFKFDDGDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDITDEDNEMITYLSELTITRPHQIMSPAIERSVWKQNVQFLHNQM…
SIO_010081: Usp9y
subclass of: SO_0000673
so part of: Usp9y
location: complement(join(1157862..1157993,1160934..1161029,1161826..1162038,1162713..1162869,1164859..1164947,1165028..1165248,1166380..1166565,1168548..1168677,1169370..1169604,1174620..1174743,1175128..1175875,1177834..1177975,1179424..1179597,1188378..1188568,1189682..1189893,1196837..1197059,1197657..1197803,1199188..1199334,1199530..1199638,1200914..1201083,1202341..1202466,1202642..1202767,1205767..1206045,1206253..1206383,1220687..1220807,1228734..1228886,1229926..1230166,1235327..1235541,1237025..1237120,1237899..1238241,1239520..1239607,1246218..1246351,1247863..1247999,1255827..1256033,1259469..1259573,1263453..1263605,1265094..1265229,1265602..1265853,1268764..1268879,1280258..1280476,1282601..1282713,1285060..1285139,1287115..1287260,1295456..1295551))
location: region:1157862-1295551:-1
so has part: feature:1295456-1295551:-1:exon
so has part: feature:1287115-1287260:-1:exon
so has part: feature:1285060-1285139:-1:exon
so has part: feature:1282601-1282713:-1:exon
so has part: feature:1280258-1280476:-1:exon
so has part: feature:1268764-1268879:-1:exon
so has part: feature:1265602-1265853:-1:exon
so has part: feature:1265094-1265229:-1:exon
so has part: feature:1263453-1263605:-1:exon
so has part: feature:1259469-1259573:-1:exon
so has part: feature:1255827-1256033:-1:exon
so has part: feature:1247863-1247999:-1:exon
so has part: feature:1246218-1246351:-1:exon
so has part: feature:1239520-1239607:-1:exon
so has part: feature:1237899-1238241:-1:exon
so has part: feature:1237025-1237120:-1:exon
so has part: feature:1235327-1235541:-1:exon
so has part: feature:1229926-1230166:-1:exon
so has part: feature:1228734-1228886:-1:exon
so has part: feature:1220687-1220807:-1:exon
so has part: feature:1206253-1206383:-1:exon
so has part: feature:1205767-1206045:-1:exon
so has part: feature:1202642-1202767:-1:exon
so has part: feature:1202341-1202466:-1:exon
so has part: feature:1200914-1201083:-1:exon
so has part: feature:1199530-1199638:-1:exon
so has part: feature:1199188-1199334:-1:exon
so has part: feature:1197657-1197803:-1:exon
so has part: feature:1196837-1197059:-1:exon
so has part: feature:1189682-1189893:-1:exon
so has part: feature:1188378-1188568:-1:exon
so has part: feature:1179424-1179597:-1:exon
so has part: feature:1177834-1177975:-1:exon
so has part: feature:1175128-1175875:-1:exon
so has part: feature:1174620-1174743:-1:exon
so has part: feature:1169370-1169604:-1:exon
so has part: feature:1168548-1168677:-1:exon
so has part: feature:1166380-1166565:-1:exon
so has part: feature:1165028-1165248:-1:exon
so has part: feature:1164859-1164947:-1:exon
so has part: feature:1162713-1162869:-1:exon
so has part: feature:1161826-1162038:-1:exon
so has part: feature:1160934-1161029:-1:exon
so has part: feature:1157862-1157993:-1:exon

XP_038956585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1295456-1295551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287115-1287260:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285060-1285139:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1282601-1282713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1280258-1280476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1268764-1268879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1265602-1265853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1265094-1265229:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1263453-1263605:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1259469-1259573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1255827-1256033:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1247863-1247999:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1246218-1246351:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1239520-1239607:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1237899-1238241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1237025-1237120:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1235327-1235541:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1229926-1230166:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1228734-1228886:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1220687-1220807:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1206253-1206383:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1205767-1206045:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1202642-1202767:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1202341-1202466:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1200914-1201083:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1199530-1199638:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1199188-1199334:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1197657-1197803:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1196837-1197059:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1189682-1189893:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1188378-1188568:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1179424-1179597:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1177834-1177975:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1175128-1175875:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1174620-1174743:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1169370-1169604:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1168548-1168677:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1166380-1166565:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1165028-1165248:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1164859-1164947:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1162713-1162869:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1161826-1162038:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1160934-1161029:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1157862-1157993:-1:exon

LOC120099619
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099619
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1165547..1165648)
location: region:1165547-1165648:-1
so has part: feature:1165547-1165648:-1:exon
subclass of: SO_0000623

120099619
type: Gene
SIO_000068: ncbigene

position:1165547:-1
position: 1165547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165648:-1
position: 1165648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165547-1165648:-1:exon

LOC120099619
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: snRNA
gene: LOC120099619
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005498742.1
SIO_010081: LOC120099619
subclass of: SO_0000673
so part of: LOC120099619
location: complement(1165547..1165648)
location: region:1165547-1165648:-1
so has part: feature:1165547-1165648:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1165547-1165648:-1:exon

LOC103694561
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1417544..1419127
location: region:1417544-1419127:1
so has part: feature:1417544-1419127:1:exon
subclass of: SO_0000011

103694561
type: Gene
SIO_000068: ncbigene

9439297
type: RGD
SIO_000068: rgd

position:1417544:1
position: 1417544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419127:1
position: 1419127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417544-1419127:1:exon

LOC103694561
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694561
product: uncharacterized LOC103694561
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_597834.3
SIO_010081: LOC103694561
subclass of: SO_0000673
so part of: LOC103694561
location: join(1417544..1417748,1418806..1418862,1419062..1419127)
location: region:1417544-1419127:1
so has part: feature:1417544-1417748:1:exon
so has part: feature:1418806-1418862:1:exon
so has part: feature:1419062-1419127:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1417544-1417748:1:exon

position:1417748:1
position: 1417748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1418806-1418862:1:exon

position:1418806:1
position: 1418806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1418862:1
position: 1418862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1419062-1419127:1:exon

position:1419062:1
position: 1419062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120099590
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1437704..1438208
location: region:1437704-1438208:1
so has part: feature:1437704-1438208:1:exon
subclass of: SO_0000011

120099590
type: Gene
SIO_000068: ncbigene

position:1437704:1
position: 1437704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438208:1
position: 1438208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1437704-1438208:1:exon

LOC120099590
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC120099590
product: uncharacterized LOC120099590
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498720.1
SIO_010081: LOC120099590
subclass of: SO_0000673
so part of: LOC120099590
location: join(1437704..1437806,1438004..1438208)
location: region:1437704-1438208:1
so has part: feature:1437704-1437806:1:exon
so has part: feature:1438004-1438208:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1437704-1437806:1:exon

position:1437806:1
position: 1437806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1438004-1438208:1:exon

position:1438004:1
position: 1438004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103694562
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1456014..1457844
location: region:1456014-1457844:1
so has part: feature:1456014-1457844:1:exon
subclass of: SO_0000011

103694562
type: Gene
SIO_000068: ncbigene

9090486
type: RGD
SIO_000068: rgd

position:1456014:1
position: 1456014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1457844:1
position: 1457844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1456014-1457844:1:exon

LOC103694562
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694562
product: uncharacterized LOC103694562
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_597835.3
SIO_010081: LOC103694562
subclass of: SO_0000673
so part of: LOC103694562
location: join(1456014..1456219,1457277..1457333,1457529..1457844)
location: region:1456014-1457844:1
so has part: feature:1456014-1456219:1:exon
so has part: feature:1457277-1457333:1:exon
so has part: feature:1457529-1457844:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1456014-1456219:1:exon

position:1456219:1
position: 1456219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1457277-1457333:1:exon

position:1457277:1
position: 1457277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1457333:1
position: 1457333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1457529-1457844:1:exon

position:1457529:1
position: 1457529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103694566
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694566
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1471828..1473766
location: region:1471828-1473766:1
so has part: feature:1471828-1473766:1:exon
subclass of: SO_0000011

103694566
type: Gene
SIO_000068: ncbigene

9468862
type: RGD
SIO_000068: rgd

position:1471828:1
position: 1471828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1473766:1
position: 1473766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471828-1473766:1:exon

LOC103694566
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694566
product: uncharacterized LOC103694566
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498740.1
SIO_010081: LOC103694566
subclass of: SO_0000673
so part of: LOC103694566
location: join(1471828..1472183,1473202..1473274,1473473..1473766)
location: region:1471828-1473766:1
so has part: feature:1471828-1472183:1:exon
so has part: feature:1473202-1473274:1:exon
so has part: feature:1473473-1473766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1471828-1472183:1:exon

position:1472183:1
position: 1472183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1473202-1473274:1:exon

position:1473202:1
position: 1473202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1473274:1
position: 1473274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1473473-1473766:1:exon

position:1473473:1
position: 1473473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103694575
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694575
note: igE-binding protein-like; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 1783693..1784834
location: region:1783693-1784834:1
so has part: feature:1783693-1784834:1:exon

103694575
type: Gene
SIO_000068: ncbigene

9428198
type: RGD
SIO_000068: rgd

position:1783693:1
position: 1783693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1784834:1
position: 1784834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1783693-1784834:1:exon

LOC103694567
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694567
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1857979..1859735
location: region:1857979-1859735:1
so has part: feature:1857979-1859735:1:exon
subclass of: SO_0000011

103694567
type: Gene
SIO_000068: ncbigene

9352976
type: RGD
SIO_000068: rgd

position:1857979:1
position: 1857979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1859735:1
position: 1859735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1857979-1859735:1:exon

LOC103694567
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694567
product: uncharacterized LOC103694567
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_597840.3
SIO_010081: LOC103694567
subclass of: SO_0000673
so part of: LOC103694567
location: join(1857979..1858175,1859255..1859311,1859509..1859735)
location: region:1857979-1859735:1
so has part: feature:1857979-1858175:1:exon
so has part: feature:1859255-1859311:1:exon
so has part: feature:1859509-1859735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1857979-1858175:1:exon

position:1858175:1
position: 1858175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1859255-1859311:1:exon

position:1859255:1
position: 1859255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1859311:1
position: 1859311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1859509-1859735:1:exon

position:1859509:1
position: 1859509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120099603
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099603
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1992193..1992835)
location: region:1992193-1992835:-1
so has part: feature:1992193-1992835:-1:exon

120099603
type: Gene
SIO_000068: ncbigene

position:1992193:-1
position: 1992193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1992835:-1
position: 1992835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1992193-1992835:-1:exon

LOC120099603
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC120099603
subclass of: SO_0000673
so part of: LOC120099603
location: complement(1992193..1992835)
location: region:1992193-1992835:-1
so has part: feature:1992193-1992835:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1992193-1992835:-1:exon

LOC103694568
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2100291..2102026
location: region:2100291-2102026:1
so has part: feature:2100291-2102026:1:exon
subclass of: SO_0000011

103694568
type: Gene
SIO_000068: ncbigene

9103403
type: RGD
SIO_000068: rgd

position:2100291:1
position: 2100291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2102026:1
position: 2102026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2100291-2102026:1:exon

LOC103694568
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694568
product: uncharacterized LOC103694568
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_597841.3
SIO_010081: LOC103694568
subclass of: SO_0000673
so part of: LOC103694568
location: join(2100291..2100503,2101561..2101618,2101811..2102026)
location: region:2100291-2102026:1
so has part: feature:2100291-2100503:1:exon
so has part: feature:2101561-2101618:1:exon
so has part: feature:2101811-2102026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2100291-2100503:1:exon

position:2100503:1
position: 2100503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2101561-2101618:1:exon

position:2101561:1
position: 2101561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2101618:1
position: 2101618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2101811-2102026:1:exon

position:2101811:1
position: 2101811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103694576
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694576
note: ribosome biogenesis regulatory protein homolog; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(2257413..2258135)
location: region:2257413-2258135:-1
so has part: feature:2257413-2258135:-1:exon

103694576
type: Gene
SIO_000068: ncbigene

9462201
type: RGD
SIO_000068: rgd

position:2257413:-1
position: 2257413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2258135:-1
position: 2258135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2257413-2258135:-1:exon

LOC120099604
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2260094..2260823)
location: region:2260094-2260823:-1
so has part: feature:2260094-2260823:-1:exon

120099604
type: Gene
SIO_000068: ncbigene

position:2260094:-1
position: 2260094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2260823:-1
position: 2260823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2260094-2260823:-1:exon

LOC120099604
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099604
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC120099604
subclass of: SO_0000673
so part of: LOC120099604
location: complement(2260094..2260823)
location: region:2260094-2260823:-1
so has part: feature:2260094-2260823:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2260094-2260823:-1:exon

LOC108353308
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC108353308
note: ribosome biogenesis regulatory protein homolog; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(2340425..2341412)
location: region:2340425-2341412:-1
so has part: feature:2340425-2341412:-1:exon

108353308
type: Gene
SIO_000068: ncbigene

11454128
type: RGD
SIO_000068: rgd

position:2340425:-1
position: 2340425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2341412:-1
position: 2341412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2340425-2341412:-1:exon

LOC108353309
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC108353309
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2701172..2703003
location: region:2701172-2703003:1
so has part: feature:2701172-2703003:1:exon
subclass of: SO_0000011

108353309
type: Gene
SIO_000068: ncbigene

11370336
type: RGD
SIO_000068: rgd

position:2701172:1
position: 2701172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2703003:1
position: 2703003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2701172-2703003:1:exon

LOC108353309
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC108353309
product: uncharacterized LOC108353309
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001842832.2
SIO_010081: LOC108353309
subclass of: SO_0000673
so part of: LOC108353309
location: join(2701172..2701363,2702426..2702482,2702680..2703003)
location: region:2701172-2703003:1
so has part: feature:2701172-2701363:1:exon
so has part: feature:2702426-2702482:1:exon
so has part: feature:2702680-2703003:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2701172-2701363:1:exon

position:2701363:1
position: 2701363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2702426-2702482:1:exon

position:2702426:1
position: 2702426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2702482:1
position: 2702482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2702680-2703003:1:exon

position:2702680:1
position: 2702680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120099605
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099605
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2825870..2826480
location: region:2825870-2826480:1
so has part: feature:2825870-2826480:1:exon

120099605
type: Gene
SIO_000068: ncbigene

position:2825870:1
position: 2825870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2826480:1
position: 2826480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2825870-2826480:1:exon

LOC120099605
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099605
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC120099605
subclass of: SO_0000673
so part of: LOC120099605
location: 2825870..2826480
location: region:2825870-2826480:1
so has part: feature:2825870-2826480:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2825870-2826480:1:exon

LOC120099601
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2830788..2831438
location: region:2830788-2831438:1
so has part: feature:2830788-2831438:1:exon

120099601
type: Gene
SIO_000068: ncbigene

position:2830788:1
position: 2830788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2831438:1
position: 2831438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2830788-2831438:1:exon

LOC120099601
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099601
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
pseudo: true
SIO_010081: LOC120099601
subclass of: SO_0000673
so part of: LOC120099601
location: 2830788..2831438
location: region:2830788-2831438:1
so has part: feature:2830788-2831438:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2830788-2831438:1:exon

LOC120099617
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099617
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 2848432..2848554
location: region:2848432-2848554:1
so has part: feature:2848432-2848554:1:exon

120099617
type: Gene
SIO_000068: ncbigene

position:2848432:1
position: 2848432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2848554:1
position: 2848554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2848432-2848554:1:exon

LOC120099617
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099617
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC120099617
subclass of: SO_0000673
so part of: LOC120099617
location: 2848432..2848554
location: region:2848432-2848554:1
so has part: feature:2848432-2848554:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2848432-2848554:1:exon

RGD1562700
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: RGD1562700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2898637..2901446
location: region:2898637-2901446:1
so has part: feature:2898637-2901446:1:exon

502007
type: Gene
SIO_000068: ncbigene

1562700
type: RGD
SIO_000068: rgd

position:2898637:1
position: 2898637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2901446:1
position: 2901446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2898637-2901446:1:exon

RGD1562700
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: RGD1562700
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: RGD1562700
subclass of: SO_0000673
so part of: RGD1562700
location: 2898637..2898696
location: region:2898637-2898696:1
so has part: feature:2898637-2898696:1:exon

position:2898696:1
position: 2898696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2898637-2898696:1:exon

RGD1562700
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: RGD1562700
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: RGD1562700
subclass of: SO_0000673
so part of: RGD1562700
location: 2899541..2899689
location: region:2899541-2899689:1
so has part: feature:2899541-2899689:1:exon

position:2899541:1
position: 2899541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2899689:1
position: 2899689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2899541-2899689:1:exon

RGD1562700
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: RGD1562700
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: RGD1562700
subclass of: SO_0000673
so part of: RGD1562700
location: 2900034..2900168
location: region:2900034-2900168:1
so has part: feature:2900034-2900168:1:exon

position:2900034:1
position: 2900034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2900168:1
position: 2900168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2900034-2900168:1:exon

RGD1562700
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: RGD1562700
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: RGD1562700
subclass of: SO_0000673
so part of: RGD1562700
location: 2900292..2900550
location: region:2900292-2900550:1
so has part: feature:2900292-2900550:1:exon

position:2900292:1
position: 2900292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2900550:1
position: 2900550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2900292-2900550:1:exon

RGD1562700
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: RGD1562700
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: RGD1562700
subclass of: SO_0000673
so part of: RGD1562700
location: 2901173..2901446
location: region:2901173-2901446:1
so has part: feature:2901173-2901446:1:exon

position:2901173:1
position: 2901173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2901173-2901446:1:exon

LOC103694694
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694694
note: transmembrane protein 106B pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(2990145..2990794)
location: region:2990145-2990794:-1
so has part: feature:2990145-2990794:-1:exon

103694694
type: Gene
SIO_000068: ncbigene

9344260
type: RGD
SIO_000068: rgd

position:2990145:-1
position: 2990145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2990794:-1
position: 2990794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2990145-2990794:-1:exon

LOC103694695
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694695
note: ribosome biogenesis regulatory protein homolog; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(3147945..3148491)
location: region:3147945-3148491:-1
so has part: feature:3147945-3148491:-1:exon

103694695
type: Gene
SIO_000068: ncbigene

9236296
type: RGD
SIO_000068: rgd

position:3147945:-1
position: 3147945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3148491:-1
position: 3148491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3147945-3148491:-1:exon

LOC120099606
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099606
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3148946..3153078)
location: region:3148946-3153078:-1
so has part: feature:3148946-3153078:-1:exon

120099606
type: Gene
SIO_000068: ncbigene

position:3148946:-1
position: 3148946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3153078:-1
position: 3153078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3148946-3153078:-1:exon

LOC120099606
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099606
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120099606
subclass of: SO_0000673
so part of: LOC120099606
location: complement(3148946..3152034)
location: region:3148946-3152034:-1
so has part: feature:3148946-3152034:-1:exon

position:3152034:-1
position: 3152034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3148946-3152034:-1:exon

LOC120099606
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099606
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120099606
subclass of: SO_0000673
so part of: LOC120099606
location: complement(3153042..3153078)
location: region:3153042-3153078:-1
so has part: feature:3153042-3153078:-1:exon

position:3153042:-1
position: 3153042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3153042-3153078:-1:exon

LOC120099594
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3415775..3419770)
location: region:3415775-3419770:-1
so has part: feature:3415775-3419770:-1:exon

120099594
type: Gene
SIO_000068: ncbigene

position:3415775:-1
position: 3415775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3419770:-1
position: 3419770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3415775-3419770:-1:exon

LOC120099594
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099594
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC120099594
subclass of: SO_0000673
so part of: LOC120099594
location: complement(3415775..3416535)
location: region:3415775-3416535:-1
so has part: feature:3415775-3416535:-1:exon

position:3416535:-1
position: 3416535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3415775-3416535:-1:exon

LOC120099594
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099594
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC120099594
subclass of: SO_0000673
so part of: LOC120099594
location: complement(3419758..3419770)
location: region:3419758-3419770:-1
so has part: feature:3419758-3419770:-1:exon

position:3419758:-1
position: 3419758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3419758-3419770:-1:exon

LOC103694681
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694681
note: 60S ribosome subunit biogenesis protein NIP7 homolog pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(3443380..3444491)
location: region:3443380-3444491:-1
so has part: feature:3443380-3444491:-1:exon

103694681
type: Gene
SIO_000068: ncbigene

9462202
type: RGD
SIO_000068: rgd

position:3443380:-1
position: 3443380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3444491:-1
position: 3444491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3443380-3444491:-1:exon

LOC103694677
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694677
note: ubiquitin-conjugating enzyme E2 G1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(3459195..3459698)
location: region:3459195-3459698:-1
so has part: feature:3459195-3459698:-1:exon

103694677
type: Gene
SIO_000068: ncbigene

9182859
type: RGD
SIO_000068: rgd

position:3459195:-1
position: 3459195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3459698:-1
position: 3459698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3459195-3459698:-1:exon

LOC103694676
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694676
note: ubiquitin-conjugating enzyme E2 G1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 3548257..3548867
location: region:3548257-3548867:1
so has part: feature:3548257-3548867:1:exon

103694676
type: Gene
SIO_000068: ncbigene

9250051
type: RGD
SIO_000068: rgd

position:3548257:1
position: 3548257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3548867:1
position: 3548867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3548257-3548867:1:exon

LOC103694680
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694680
note: vomeronasal type-2 receptor 116-like; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(3656434..3661351)
location: region:3656434-3661351:-1
so has part: feature:3656434-3661351:-1:exon

103694680
type: Gene
SIO_000068: ncbigene

9340696
type: RGD
SIO_000068: rgd

position:3656434:-1
position: 3656434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3661351:-1
position: 3661351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3656434-3661351:-1:exon

LOC103694679
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694679
note: ubiquitin-conjugating enzyme E2 G1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 3713417..3713959
location: region:3713417-3713959:1
so has part: feature:3713417-3713959:1:exon

103694679
type: Gene
SIO_000068: ncbigene

9447842
type: RGD
SIO_000068: rgd

position:3713417:1
position: 3713417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3713959:1
position: 3713959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3713417-3713959:1:exon

LOC103694678
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694678
note: protein tyrosine phosphatase type IVA 1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 3789981..3790528
location: region:3789981-3790528:1
so has part: feature:3789981-3790528:1:exon

103694678
type: Gene
SIO_000068: ncbigene

9296874
type: RGD
SIO_000068: rgd

position:3789981:1
position: 3789981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3790528:1
position: 3790528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3789981-3790528:1:exon

LOC120099607
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3890120..3894030
location: region:3890120-3894030:1
so has part: feature:3890120-3894030:1:exon

120099607
type: Gene
SIO_000068: ncbigene

position:3890120:1
position: 3890120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3894030:1
position: 3894030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3890120-3894030:1:exon

LOC120099607
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099607
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120099607
subclass of: SO_0000673
so part of: LOC120099607
location: 3890120..3890125
location: region:3890120-3890125:1
so has part: feature:3890120-3890125:1:exon

position:3890125:1
position: 3890125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3890120-3890125:1:exon

LOC120099607
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099607
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120099607
subclass of: SO_0000673
so part of: LOC120099607
location: 3892272..3894030
location: region:3892272-3894030:1
so has part: feature:3892272-3894030:1:exon

position:3892272:1
position: 3892272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3892272-3894030:1:exon

LOC103694740
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694740
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(4217150..4217476)
location: region:4217150-4217476:-1
so has part: feature:4217150-4217476:-1:exon

103694740
type: Gene
SIO_000068: ncbigene

9198159
type: RGD
SIO_000068: rgd

position:4217150:-1
position: 4217150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4217476:-1
position: 4217476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4217150-4217476:-1:exon

LOC103694741
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694741
note: glutaredoxin-1-like; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 4282043..4302711
location: region:4282043-4302711:1
so has part: feature:4282043-4302711:1:exon

103694741
type: Gene
SIO_000068: ncbigene

9134663
type: RGD
SIO_000068: rgd

position:4282043:1
position: 4282043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4302711:1
position: 4302711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4282043-4302711:1:exon

LOC120099596
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4700293..4729973
location: region:4700293-4729973:1
so has part: feature:4700293-4729973:1:exon
subclass of: SO_0000011

120099596
type: Gene
SIO_000068: ncbigene

position:4700293:1
position: 4700293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4729973:1
position: 4729973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4700293-4729973:1:exon

LOC120099596
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC120099596
product: uncharacterized LOC120099596
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498730.1
SIO_010081: LOC120099596
subclass of: SO_0000673
so part of: LOC120099596
location: join(4700293..4700418,4727975..4728057,4729593..4729973)
location: region:4700293-4729973:1
so has part: feature:4700293-4700418:1:exon
so has part: feature:4727975-4728057:1:exon
so has part: feature:4729593-4729973:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4700293-4700418:1:exon

position:4700418:1
position: 4700418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4727975-4728057:1:exon

position:4727975:1
position: 4727975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4728057:1
position: 4728057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4729593-4729973:1:exon

position:4729593:1
position: 4729593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103694673
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694673
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 5633376..5633720
location: region:5633376-5633720:1
so has part: feature:5633376-5633720:1:exon

103694673
type: Gene
SIO_000068: ncbigene

9195068
type: RGD
SIO_000068: rgd

position:5633376:1
position: 5633376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5633720:1
position: 5633720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5633376-5633720:1:exon

LOC103694672
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694672
note: glutaredoxin-1-like; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 5704249..5711242
location: region:5704249-5711242:1
so has part: feature:5704249-5711242:1:exon

103694672
type: Gene
SIO_000068: ncbigene

9360192
type: RGD
SIO_000068: rgd

position:5704249:1
position: 5704249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5711242:1
position: 5711242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5704249-5711242:1:exon

LOC103694671
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694671
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 5838589..5942512
location: region:5838589-5942512:1
so has part: feature:5838589-5942512:1:exon

103694671
type: Gene
SIO_000068: ncbigene

9453007
type: RGD
SIO_000068: rgd

position:5838589:1
position: 5838589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5942512:1
position: 5942512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5838589-5942512:1:exon

LOC120099598
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099598
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6029825..6030394
location: region:6029825-6030394:1
so has part: feature:6029825-6030394:1:exon
subclass of: SO_0000010

120099598
type: Gene
SIO_000068: ncbigene

position:6029825:1
position: 6029825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6030394:1
position: 6030394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6029825-6030394:1:exon

LOC120099598
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: LOC120099598
product: 60S ribosomal protein L19-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
transcript id: XM_039100668.1
SIO_010081: LOC120099598
subclass of: SO_0000673
so part of: LOC120099598
location: 6029825..6030394
location: region:6029825-6030394:1
so has part: feature:6029825-6030394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6029825-6030394:1:exon

LOC120099598
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: LOC120099598
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L19-like
translation: MLRLQKRLASSVLHYGKKKVQLDHNETNKIANPNSRQLIRKLTEDGLIIWKPVTVHSQALCQKNTLKGRHMFIGKRKGTANTWVPERVTWMRRMRILHRILRRYWESYKIDRHMYHSLYLKVKRNVFKNQWILIAQVHKPKSEEVRKKLLADQAEACRSKTKEAQKCMGGFPPGQEGRDHHYSLQGRRD
SIO_010081: LOC120099598
subclass of: SO_0000673
so part of: LOC120099598
location: 6029825..6030394
location: region:6029825-6030394:1
so has part: feature:6029825-6030394:1:exon

XP_038956596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6029825-6030394:1:exon

LOC120099584
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6377731..6383526)
location: region:6377731-6383526:-1
so has part: feature:6377731-6383526:-1:exon
subclass of: SO_0000011

120099584
type: Gene
SIO_000068: ncbigene

position:6377731:-1
position: 6377731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6383526:-1
position: 6383526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6377731-6383526:-1:exon

LOC120099584
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC120099584
product: uncharacterized LOC120099584
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498713.1
SIO_010081: LOC120099584
subclass of: SO_0000673
so part of: LOC120099584
location: complement(join(6377731..6377924,6381772..6381860,6383393..6383526))
location: region:6377731-6383526:-1
so has part: feature:6383393-6383526:-1:exon
so has part: feature:6381772-6381860:-1:exon
so has part: feature:6377731-6377924:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6383393-6383526:-1:exon

position:6383393:-1
position: 6383393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6381772-6381860:-1:exon

position:6381772:-1
position: 6381772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6381860:-1
position: 6381860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6377731-6377924:-1:exon

position:6377924:-1
position: 6377924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120099608
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099608
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6655114..6657529
location: region:6655114-6657529:1
so has part: feature:6655114-6657529:1:exon

120099608
type: Gene
SIO_000068: ncbigene

position:6655114:1
position: 6655114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6657529:1
position: 6657529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6655114-6657529:1:exon

LOC120099608
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099608
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120099608
subclass of: SO_0000673
so part of: LOC120099608
location: 6655114..6655276
location: region:6655114-6655276:1
so has part: feature:6655114-6655276:1:exon

position:6655276:1
position: 6655276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6655114-6655276:1:exon

LOC120099608
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099608
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120099608
subclass of: SO_0000673
so part of: LOC120099608
location: 6656830..6657164
location: region:6656830-6657164:1
so has part: feature:6656830-6657164:1:exon

position:6656830:1
position: 6656830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6657164:1
position: 6657164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6656830-6657164:1:exon

LOC120099608
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099608
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120099608
subclass of: SO_0000673
so part of: LOC120099608
location: 6657285..6657529
location: region:6657285-6657529:1
so has part: feature:6657285-6657529:1:exon

position:6657285:1
position: 6657285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6657285-6657529:1:exon

LOC120099609
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099609
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6686788..6721798
location: region:6686788-6721798:1
so has part: feature:6686788-6721798:1:exon
subclass of: SO_0000010

120099609
type: Gene
SIO_000068: ncbigene

position:6686788:1
position: 6686788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6721798:1
position: 6721798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6686788-6721798:1:exon

LOC120099609
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: LOC120099609
product: glutaredoxin-1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_039100689.1
SIO_010081: LOC120099609
subclass of: SO_0000673
so part of: LOC120099609
location: join(6686788..6686944,6714861..6714962,6721451..6721798)
location: region:6686788-6721798:1
so has part: feature:6686788-6686944:1:exon
so has part: feature:6714861-6714962:1:exon
so has part: feature:6721451-6721798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6686788-6686944:1:exon

position:6686944:1
position: 6686944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6714861-6714962:1:exon

position:6714861:1
position: 6714861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6714962:1
position: 6714962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6721451-6721798:1:exon

position:6721451:1
position: 6721451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120099609
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: LOC120099609
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:6721684..6721686,aa:OTHER)
product: LOW QUALITY PROTEIN: glutaredoxin-1-like
translation: MSWHVYIITVKCDIVLLASVARNEGSEAKLHPVELCISLRGLSTRSHDTCERRSALKPSSQPASINEHVQQIKKMEKLTIELQKMTWKLQPHSTAQEHGYCKTQSGKIFLFIDTNFQYCSNTQKILKQLPFKHGLLGFVDITATNTTNLIQDYLQQLTGGRIVPXVFIGIKDFIGRCSYLISLHQNGELMMWLKQIGALLL
SIO_010081: LOC120099609
subclass of: SO_0000673
so part of: LOC120099609
location: join(6686788..6686944,6714861..6714962,6721451..6721798)
location: region:6686788-6721798:1
so has part: feature:6686788-6686944:1:exon
so has part: feature:6714861-6714962:1:exon
so has part: feature:6721451-6721798:1:exon

XP_038956617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6686788-6686944:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6714861-6714962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6721451-6721798:1:exon

LOC120099616
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099616
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 6928132..6928286
location: region:6928132-6928286:1
so has part: feature:6928132-6928286:1:exon

120099616
type: Gene
SIO_000068: ncbigene

position:6928132:1
position: 6928132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6928286:1
position: 6928286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6928132-6928286:1:exon

LOC120099616
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099616
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC120099616
subclass of: SO_0000673
so part of: LOC120099616
location: 6928132..6928286
location: region:6928132-6928286:1
so has part: feature:6928132-6928286:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6928132-6928286:1:exon

LOC120099589
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7003639..7009733)
location: region:7003639-7009733:-1
so has part: feature:7003639-7009733:-1:exon
subclass of: SO_0000011

120099589
type: Gene
SIO_000068: ncbigene

position:7003639:-1
position: 7003639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7009733:-1
position: 7009733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7003639-7009733:-1:exon

LOC120099589
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC120099589
product: uncharacterized LOC120099589
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498717.1
SIO_010081: LOC120099589
subclass of: SO_0000673
so part of: LOC120099589
location: complement(join(7003639..7003746,7003920..7004090,7006612..7006706,7009649..7009733))
location: region:7003639-7009733:-1
so has part: feature:7009649-7009733:-1:exon
so has part: feature:7006612-7006706:-1:exon
so has part: feature:7003920-7004090:-1:exon
so has part: feature:7003639-7003746:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7009649-7009733:-1:exon

position:7009649:-1
position: 7009649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7006612-7006706:-1:exon

position:7006612:-1
position: 7006612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7006706:-1
position: 7006706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7003920-7004090:-1:exon

position:7003920:-1
position: 7003920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7004090:-1
position: 7004090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7003639-7003746:-1:exon

position:7003746:-1
position: 7003746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC108353333
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC108353333
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 7048681..7049008
location: region:7048681-7049008:1
so has part: feature:7048681-7049008:1:exon

108353333
type: Gene
SIO_000068: ncbigene

11370500
type: RGD
SIO_000068: rgd

position:7048681:1
position: 7048681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7049008:1
position: 7049008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7048681-7049008:1:exon

LOC103694631
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694631
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7257936..7263825
location: region:7257936-7263825:1
so has part: feature:7257936-7263825:1:exon
subclass of: SO_0000011

103694631
type: Gene
SIO_000068: ncbigene

9318617
type: RGD
SIO_000068: rgd

position:7257936:1
position: 7257936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7263825:1
position: 7263825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7257936-7263825:1:exon

LOC103694631
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694631
product: uncharacterized LOC103694631
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_597868.3
SIO_010081: LOC103694631
subclass of: SO_0000673
so part of: LOC103694631
location: join(7257936..7258192,7259111..7259192,7259315..7259385,7263626..7263825)
location: region:7257936-7263825:1
so has part: feature:7257936-7258192:1:exon
so has part: feature:7259111-7259192:1:exon
so has part: feature:7259315-7259385:1:exon
so has part: feature:7263626-7263825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7257936-7258192:1:exon

position:7258192:1
position: 7258192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7259111-7259192:1:exon

position:7259111:1
position: 7259111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7259192:1
position: 7259192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7259315-7259385:1:exon

position:7259315:1
position: 7259315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7259385:1
position: 7259385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7263626-7263825:1:exon

position:7263626:1
position: 7263626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120099595
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099595
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7296606..7321394)
location: region:7296606-7321394:-1
so has part: feature:7296606-7321394:-1:exon
subclass of: SO_0000011

120099595
type: Gene
SIO_000068: ncbigene

position:7296606:-1
position: 7296606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7321394:-1
position: 7321394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7296606-7321394:-1:exon

LOC120099595
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC120099595
product: uncharacterized LOC120099595
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498729.1
SIO_010081: LOC120099595
subclass of: SO_0000673
so part of: LOC120099595
location: complement(join(7296606..7298254,7299411..7301554,7316900..7317020,7321281..7321394))
location: region:7296606-7321394:-1
so has part: feature:7321281-7321394:-1:exon
so has part: feature:7316900-7317020:-1:exon
so has part: feature:7299411-7301554:-1:exon
so has part: feature:7296606-7298254:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7321281-7321394:-1:exon

position:7321281:-1
position: 7321281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7316900-7317020:-1:exon

position:7316900:-1
position: 7316900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7317020:-1
position: 7317020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7299411-7301554:-1:exon

position:7299411:-1
position: 7299411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7301554:-1
position: 7301554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7296606-7298254:-1:exon

position:7298254:-1
position: 7298254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120099593
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7566523..7569346
location: region:7566523-7569346:1
so has part: feature:7566523-7569346:1:exon

120099593
type: Gene
SIO_000068: ncbigene

position:7566523:1
position: 7566523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7569346:1
position: 7569346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7566523-7569346:1:exon

LOC120099593
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099593
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120099593
subclass of: SO_0000673
so part of: LOC120099593
location: 7566523..7567189
location: region:7566523-7567189:1
so has part: feature:7566523-7567189:1:exon

position:7567189:1
position: 7567189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7566523-7567189:1:exon

LOC120099593
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099593
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120099593
subclass of: SO_0000673
so part of: LOC120099593
location: 7567690..7569346
location: region:7567690-7569346:1
so has part: feature:7567690-7569346:1:exon

position:7567690:1
position: 7567690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7567690-7569346:1:exon

LOC120099602
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7783637..7788574
location: region:7783637-7788574:1
so has part: feature:7783637-7788574:1:exon
subclass of: SO_0000011

120099602
type: Gene
SIO_000068: ncbigene

position:7783637:1
position: 7783637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7788574:1
position: 7788574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7783637-7788574:1:exon

LOC120099602
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC120099602
product: uncharacterized LOC120099602, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498737.1
SIO_010081: LOC120099602
subclass of: SO_0000673
so part of: LOC120099602
location: join(7783637..7783896,7785996..7786185,7786814..7787023,7787964..7788574)
location: region:7783637-7788574:1
so has part: feature:7783637-7783896:1:exon
so has part: feature:7785996-7786185:1:exon
so has part: feature:7786814-7787023:1:exon
so has part: feature:7787964-7788574:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7783637-7783896:1:exon

position:7783896:1
position: 7783896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7785996-7786185:1:exon

position:7785996:1
position: 7785996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7786185:1
position: 7786185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7786814-7787023:1:exon

position:7786814:1
position: 7786814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7787023:1
position: 7787023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7787964-7788574:1:exon

position:7787964:1
position: 7787964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120099602
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC120099602
product: uncharacterized LOC120099602, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498738.1
SIO_010081: LOC120099602
subclass of: SO_0000673
so part of: LOC120099602
location: join(7783637..7783855,7785996..7786185,7786814..7787023,7787964..7788573)
location: region:7783637-7788573:1
so has part: feature:7783637-7783855:1:exon
so has part: feature:7785996-7786185:1:exon
so has part: feature:7786814-7787023:1:exon
so has part: feature:7787964-7788573:1:exon

position:7788573:1
position: 7788573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7783637-7783855:1:exon

position:7783855:1
position: 7783855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7785996-7786185:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7786814-7787023:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7787964-7788573:1:exon

LOC120099610
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099610
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8315635..8316274
location: region:8315635-8316274:1
so has part: feature:8315635-8316274:1:exon

120099610
type: Gene
SIO_000068: ncbigene

position:8315635:1
position: 8315635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8316274:1
position: 8316274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8315635-8316274:1:exon

LOC120099610
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099610
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120099610
subclass of: SO_0000673
so part of: LOC120099610
location: 8315635..8315951
location: region:8315635-8315951:1
so has part: feature:8315635-8315951:1:exon

position:8315951:1
position: 8315951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8315635-8315951:1:exon

LOC120099610
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099610
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120099610
subclass of: SO_0000673
so part of: LOC120099610
location: 8316087..8316274
location: region:8316087-8316274:1
so has part: feature:8316087-8316274:1:exon

position:8316087:1
position: 8316087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8316087-8316274:1:exon

Olr1761-ps
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: Olr1761-ps
note: olfactory receptor pseudogene 1761; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 8642808..8643153
location: region:8642808-8643153:1
so has part: feature:8642808-8643153:1:exon

405656
type: Gene
SIO_000068: ncbigene

1334068
type: RGD
SIO_000068: rgd

position:8642808:1
position: 8642808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8643153:1
position: 8643153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8642808-8643153:1:exon

LOC120099581
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9121803..9208311
location: region:9121803-9208311:1
so has part: feature:9121803-9208311:1:exon
subclass of: SO_0000011

120099581
type: Gene
SIO_000068: ncbigene

position:9121803:1
position: 9121803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9208311:1
position: 9208311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9121803-9208311:1:exon

LOC120099581
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC120099581
product: uncharacterized LOC120099581, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005498707.1
SIO_010081: LOC120099581
subclass of: SO_0000673
so part of: LOC120099581
location: join(9121803..9121937,9126585..9126934,9133168..9133235,9187414..9187594,9192297..9192496)
location: region:9121803-9192496:1
so has part: feature:9121803-9121937:1:exon
so has part: feature:9126585-9126934:1:exon
so has part: feature:9133168-9133235:1:exon
so has part: feature:9187414-9187594:1:exon
so has part: feature:9192297-9192496:1:exon

position:9192496:1
position: 9192496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9121803-9121937:1:exon

position:9121937:1
position: 9121937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9126585-9126934:1:exon

position:9126585:1
position: 9126585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9126934:1
position: 9126934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9133168-9133235:1:exon

position:9133168:1
position: 9133168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9133235:1
position: 9133235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9187414-9187594:1:exon

position:9187414:1
position: 9187414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9187594:1
position: 9187594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9192297-9192496:1:exon

position:9192297:1
position: 9192297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120099581
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC120099581
product: uncharacterized LOC120099581, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498706.1
SIO_010081: LOC120099581
subclass of: SO_0000673
so part of: LOC120099581
location: join(9133170..9133235,9187414..9187594,9192297..9192495,9208165..9208311)
location: region:9133170-9208311:1
so has part: feature:9133170-9133235:1:exon
so has part: feature:9187414-9187594:1:exon
so has part: feature:9192297-9192495:1:exon
so has part: feature:9208165-9208311:1:exon

position:9133170:1
position: 9133170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9133170-9133235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9187414-9187594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9192297-9192495:1:exon

position:9192495:1
position: 9192495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9208165-9208311:1:exon

position:9208165:1
position: 9208165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120099581
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC120099581
product: uncharacterized LOC120099581, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498708.1
SIO_010081: LOC120099581
subclass of: SO_0000673
so part of: LOC120099581
location: join(9172165..9172437,9187414..9187594,9192297..9192496)
location: region:9172165-9192496:1
so has part: feature:9172165-9172437:1:exon
so has part: feature:9187414-9187594:1:exon
so has part: feature:9192297-9192496:1:exon

position:9172165:1
position: 9172165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9172165-9172437:1:exon

position:9172437:1
position: 9172437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9187414-9187594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9192297-9192496:1:exon

LOC120099583
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9230766..9245934)
location: region:9230766-9245934:-1
so has part: feature:9230766-9245934:-1:exon
subclass of: SO_0000011

120099583
type: Gene
SIO_000068: ncbigene

position:9230766:-1
position: 9230766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9245934:-1
position: 9245934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9230766-9245934:-1:exon

LOC120099583
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC120099583
product: uncharacterized LOC120099583
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498712.1
SIO_010081: LOC120099583
subclass of: SO_0000673
so part of: LOC120099583
location: complement(join(9230766..9231060,9244623..9245934))
location: region:9230766-9245934:-1
so has part: feature:9244623-9245934:-1:exon
so has part: feature:9230766-9231060:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9244623-9245934:-1:exon

position:9244623:-1
position: 9244623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9230766-9231060:-1:exon

position:9231060:-1
position: 9231060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120099611
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099611
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(9321917..9324370)
location: region:9321917-9324370:-1
so has part: feature:9321917-9324370:-1:exon

120099611
type: Gene
SIO_000068: ncbigene

position:9321917:-1
position: 9321917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9324370:-1
position: 9324370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9321917-9324370:-1:exon

LOC120099611
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099611
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120099611
subclass of: SO_0000673
so part of: LOC120099611
location: complement(9321917..9322240)
location: region:9321917-9322240:-1
so has part: feature:9321917-9322240:-1:exon

position:9322240:-1
position: 9322240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9321917-9322240:-1:exon

LOC120099611
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099611
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120099611
subclass of: SO_0000673
so part of: LOC120099611
location: complement(9324334..9324370)
location: region:9324334-9324370:-1
so has part: feature:9324334-9324370:-1:exon

position:9324334:-1
position: 9324334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9324334-9324370:-1:exon

LOC103694765
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9324790..9341868)
location: region:9324790-9341868:-1
so has part: feature:9324790-9341868:-1:exon
subclass of: SO_0000011

103694765
type: Gene
SIO_000068: ncbigene

9166886
type: RGD
SIO_000068: rgd

position:9324790:-1
position: 9324790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9341868:-1
position: 9341868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9324790-9341868:-1:exon

LOC103694765
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694765
product: uncharacterized LOC103694765, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498719.1
SIO_010081: LOC103694765
subclass of: SO_0000673
so part of: LOC103694765
location: complement(join(9324790..9327162,9330025..9330235,9332781..9332957,9333793..9333895,9341352..9341868))
location: region:9324790-9341868:-1
so has part: feature:9341352-9341868:-1:exon
so has part: feature:9333793-9333895:-1:exon
so has part: feature:9332781-9332957:-1:exon
so has part: feature:9330025-9330235:-1:exon
so has part: feature:9324790-9327162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9341352-9341868:-1:exon

position:9341352:-1
position: 9341352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9333793-9333895:-1:exon

position:9333793:-1
position: 9333793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9333895:-1
position: 9333895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9332781-9332957:-1:exon

position:9332781:-1
position: 9332781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9332957:-1
position: 9332957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9330025-9330235:-1:exon

position:9330025:-1
position: 9330025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9330235:-1
position: 9330235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9324790-9327162:-1:exon

position:9327162:-1
position: 9327162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103694765
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694765
product: uncharacterized LOC103694765, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498718.1
SIO_010081: LOC103694765
subclass of: SO_0000673
so part of: LOC103694765
location: complement(join(9324790..9327162,9330025..9330235,9332781..9332957,9333793..9334119))
location: region:9324790-9334119:-1
so has part: feature:9333793-9334119:-1:exon
so has part: feature:9332781-9332957:-1:exon
so has part: feature:9330025-9330235:-1:exon
so has part: feature:9324790-9327162:-1:exon

position:9334119:-1
position: 9334119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9333793-9334119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9332781-9332957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9330025-9330235:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9324790-9327162:-1:exon

LOC103694749
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694749
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9393004..9398967
location: region:9393004-9398967:1
so has part: feature:9393004-9398967:1:exon
subclass of: SO_0000011

103694749
type: Gene
SIO_000068: ncbigene

9472119
type: RGD
SIO_000068: rgd

position:9393004:1
position: 9393004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9398967:1
position: 9398967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9393004-9398967:1:exon

LOC103694749
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694749
product: uncharacterized LOC103694749
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498727.1
SIO_010081: LOC103694749
subclass of: SO_0000673
so part of: LOC103694749
location: join(9393004..9394775,9395656..9395832,9398379..9398967)
location: region:9393004-9398967:1
so has part: feature:9393004-9394775:1:exon
so has part: feature:9395656-9395832:1:exon
so has part: feature:9398379-9398967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9393004-9394775:1:exon

position:9394775:1
position: 9394775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9395656-9395832:1:exon

position:9395656:1
position: 9395656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9395832:1
position: 9395832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9398379-9398967:1:exon

position:9398379:1
position: 9398379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120099612
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9404679..9406650
location: region:9404679-9406650:1
so has part: feature:9404679-9406650:1:exon

120099612
type: Gene
SIO_000068: ncbigene

position:9404679:1
position: 9404679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9406650:1
position: 9406650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9404679-9406650:1:exon

LOC120099612
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099612
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120099612
subclass of: SO_0000673
so part of: LOC120099612
location: 9404679..9404817
location: region:9404679-9404817:1
so has part: feature:9404679-9404817:1:exon

position:9404817:1
position: 9404817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9404679-9404817:1:exon

LOC120099612
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099612
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120099612
subclass of: SO_0000673
so part of: LOC120099612
location: 9406327..9406650
location: region:9406327-9406650:1
so has part: feature:9406327-9406650:1:exon

position:9406327:1
position: 9406327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9406327-9406650:1:exon

LOC120099592
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9842402..9847129
location: region:9842402-9847129:1
so has part: feature:9842402-9847129:1:exon
subclass of: SO_0000011

120099592
type: Gene
SIO_000068: ncbigene

position:9842402:1
position: 9842402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9847129:1
position: 9847129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9842402-9847129:1:exon

LOC120099592
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC120099592
product: uncharacterized LOC120099592
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498721.1
SIO_010081: LOC120099592
subclass of: SO_0000673
so part of: LOC120099592
location: join(9842402..9842990,9845138..9845192,9845618..9847129)
location: region:9842402-9847129:1
so has part: feature:9842402-9842990:1:exon
so has part: feature:9845138-9845192:1:exon
so has part: feature:9845618-9847129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9842402-9842990:1:exon

position:9842990:1
position: 9842990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9845138-9845192:1:exon

position:9845138:1
position: 9845138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9845192:1
position: 9845192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9845618-9847129:1:exon

position:9845618:1
position: 9845618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108353397
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC108353397
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 10211573..10211899
location: region:10211573-10211899:1
so has part: feature:10211573-10211899:1:exon

108353397
type: Gene
SIO_000068: ncbigene

11506673
type: RGD
SIO_000068: rgd

position:10211573:1
position: 10211573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10211899:1
position: 10211899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10211573-10211899:1:exon

LOC108353344
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC108353344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10263374..10269022
location: region:10263374-10269022:1
so has part: feature:10263374-10269022:1:exon
subclass of: SO_0000011

108353344
type: Gene
SIO_000068: ncbigene

11483670
type: RGD
SIO_000068: rgd

position:10263374:1
position: 10263374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10269022:1
position: 10269022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10263374-10269022:1:exon

LOC108353344
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC108353344
product: uncharacterized LOC108353344
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498728.1
SIO_010081: LOC108353344
subclass of: SO_0000673
so part of: LOC108353344
location: join(10263374..10264128,10268823..10269022)
location: region:10263374-10269022:1
so has part: feature:10263374-10264128:1:exon
so has part: feature:10268823-10269022:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10263374-10264128:1:exon

position:10264128:1
position: 10264128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10268823-10269022:1:exon

position:10268823:1
position: 10268823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103694797
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694797
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 10987037..10987382
location: region:10987037-10987382:1
so has part: feature:10987037-10987382:1:exon

103694797
type: Gene
SIO_000068: ncbigene

9310094
type: RGD
SIO_000068: rgd

position:10987037:1
position: 10987037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10987382:1
position: 10987382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10987037-10987382:1:exon

LOC108353412
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC108353412
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 11503285..11503613
location: region:11503285-11503613:1
so has part: feature:11503285-11503613:1:exon

108353412
type: Gene
SIO_000068: ncbigene

11444648
type: RGD
SIO_000068: rgd

position:11503285:1
position: 11503285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11503613:1
position: 11503613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11503285-11503613:1:exon

LOC103694780
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694780
note: vomeronasal type-2 receptor 116-like; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 11541938..11547595
location: region:11541938-11547595:1
so has part: feature:11541938-11547595:1:exon

103694780
type: Gene
SIO_000068: ncbigene

9463309
type: RGD
SIO_000068: rgd

position:11541938:1
position: 11541938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11547595:1
position: 11547595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11541938-11547595:1:exon

LOC103694798
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694798
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 11621208..11621713
location: region:11621208-11621713:1
so has part: feature:11621208-11621713:1:exon

103694798
type: Gene
SIO_000068: ncbigene

9355804
type: RGD
SIO_000068: rgd

position:11621208:1
position: 11621208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11621713:1
position: 11621713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11621208-11621713:1:exon

LOC120099613
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099613
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 11902738..11903365
location: region:11902738-11903365:1
so has part: feature:11902738-11903365:1:exon

120099613
type: Gene
SIO_000068: ncbigene

position:11902738:1
position: 11902738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11903365:1
position: 11903365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11902738-11903365:1:exon

LOC120099613
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099613
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120099613
subclass of: SO_0000673
so part of: LOC120099613
location: 11902738..11903042
location: region:11902738-11903042:1
so has part: feature:11902738-11903042:1:exon

position:11903042:1
position: 11903042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11902738-11903042:1:exon

LOC120099613
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099613
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120099613
subclass of: SO_0000673
so part of: LOC120099613
location: 11903178..11903365
location: region:11903178-11903365:1
so has part: feature:11903178-11903365:1:exon

position:11903178:1
position: 11903178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11903178-11903365:1:exon

LOC120099599
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099599
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11992915..12005260)
location: region:11992915-12005260:-1
so has part: feature:11992915-12005260:-1:exon
subclass of: SO_0000011

120099599
type: Gene
SIO_000068: ncbigene

position:11992915:-1
position: 11992915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12005260:-1
position: 12005260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11992915-12005260:-1:exon

LOC120099599
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC120099599
product: uncharacterized LOC120099599
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498732.1
SIO_010081: LOC120099599
subclass of: SO_0000673
so part of: LOC120099599
location: complement(join(11992915..11993152,12004824..12005260))
location: region:11992915-12005260:-1
so has part: feature:12004824-12005260:-1:exon
so has part: feature:11992915-11993152:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12004824-12005260:-1:exon

position:12004824:-1
position: 12004824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11992915-11993152:-1:exon

position:11993152:-1
position: 11993152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120099587
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12156929..12161299)
location: region:12156929-12161299:-1
so has part: feature:12156929-12161299:-1:exon
subclass of: SO_0000010

120099587
type: Gene
SIO_000068: ncbigene

position:12156929:-1
position: 12156929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12161299:-1
position: 12161299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12156929-12161299:-1:exon

LOC120099587
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: LOC120099587
product: uncharacterized LOC120099587
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read
transcript id: XM_039100662.1
SIO_010081: LOC120099587
subclass of: SO_0000673
so part of: LOC120099587
location: complement(join(12156929..12157827,12157971..12161299))
location: region:12156929-12161299:-1
so has part: feature:12157971-12161299:-1:exon
so has part: feature:12156929-12157827:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12157971-12161299:-1:exon

position:12157971:-1
position: 12157971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12156929-12157827:-1:exon

position:12157827:-1
position: 12157827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120099587
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: LOC120099587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120099587
translation: MPLEEKIRVPRRTKYKSSGEDTLYPLKELEALELAGSDSEQELSESEEEELEEEAAIYEEERYGPRWRATVKKPKVMDPLWARLVILFLFFFVWDREATDGKLKPGPKPLWQMVPACLEDKQCEEAIRAVRTDQRVLAEQQSMSEGEKVSKEKKKRKGDKRNREKAEIKKEDNQDQETNKIYSLKALTLEMSDNLESITDSLEKVKLKVEPSGPGPPAEQQKEAQDSTSVRPPDSY
SIO_010081: LOC120099587
subclass of: SO_0000673
so part of: LOC120099587
location: complement(12160122..12160832)
location: region:12160122-12160832:-1
so has part: feature:12160122-12160832:-1:exon

XP_038956590.1
type: Protein
SIO_000068: ncbiprotein

position:12160122:-1
position: 12160122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12160832:-1
position: 12160832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12160122-12160832:-1:exon

LOC103694810
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694810
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(12206598..12206912)
location: region:12206598-12206912:-1
so has part: feature:12206598-12206912:-1:exon

103694810
type: Gene
SIO_000068: ncbigene

9169032
type: RGD
SIO_000068: rgd

position:12206598:-1
position: 12206598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12206912:-1
position: 12206912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12206598-12206912:-1:exon

LOC108353413
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC108353413
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12374435..12388006)
location: region:12374435-12388006:-1
so has part: feature:12374435-12388006:-1:exon
subclass of: SO_0000011

108353413
type: Gene
SIO_000068: ncbigene

11516575
type: RGD
SIO_000068: rgd

position:12374435:-1
position: 12374435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12388006:-1
position: 12388006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12374435-12388006:-1:exon

LOC108353413
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC108353413
product: uncharacterized LOC108353413, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498715.1
SIO_010081: LOC108353413
subclass of: SO_0000673
so part of: LOC108353413
location: complement(join(12374435..12374807,12377159..12377242,12387450..12388006))
location: region:12374435-12388006:-1
so has part: feature:12387450-12388006:-1:exon
so has part: feature:12377159-12377242:-1:exon
so has part: feature:12374435-12374807:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12387450-12388006:-1:exon

position:12387450:-1
position: 12387450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12377159-12377242:-1:exon

position:12377159:-1
position: 12377159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12377242:-1
position: 12377242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12374435-12374807:-1:exon

position:12374807:-1
position: 12374807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC108353413
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC108353413
product: uncharacterized LOC108353413, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001842926.2
SIO_010081: LOC108353413
subclass of: SO_0000673
so part of: LOC108353413
location: complement(join(12374435..12374807,12377159..12377242,12377325..12377646))
location: region:12374435-12377646:-1
so has part: feature:12377325-12377646:-1:exon
so has part: feature:12377159-12377242:-1:exon
so has part: feature:12374435-12374807:-1:exon

position:12377646:-1
position: 12377646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12377325-12377646:-1:exon

position:12377325:-1
position: 12377325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12377159-12377242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12374435-12374807:-1:exon

LOC103694800
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694800
note: vomeronasal type-2 receptor 116-like; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(12429895..12436863)
location: region:12429895-12436863:-1
so has part: feature:12429895-12436863:-1:exon

103694800
type: Gene
SIO_000068: ncbigene

9312119
type: RGD
SIO_000068: rgd

position:12429895:-1
position: 12429895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12436863:-1
position: 12436863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12429895-12436863:-1:exon

LOC103694802
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694802
note: vomeronasal type-2 receptor 116-like; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 13124200..13130684
location: region:13124200-13130684:1
so has part: feature:13124200-13130684:1:exon

103694802
type: Gene
SIO_000068: ncbigene

9164478
type: RGD
SIO_000068: rgd

position:13124200:1
position: 13124200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13130684:1
position: 13130684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13124200-13130684:1:exon

LOC103694783
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694783
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(13301680..13302006)
location: region:13301680-13302006:-1
so has part: feature:13301680-13302006:-1:exon

103694783
type: Gene
SIO_000068: ncbigene

9070710
type: RGD
SIO_000068: rgd

position:13301680:-1
position: 13301680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13302006:-1
position: 13302006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13301680-13302006:-1:exon

LOC120099588
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099588
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13302657..13304710)
location: region:13302657-13304710:-1
so has part: feature:13302657-13304710:-1:exon
subclass of: SO_0000011

120099588
type: Gene
SIO_000068: ncbigene

position:13302657:-1
position: 13302657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13304710:-1
position: 13304710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13302657-13304710:-1:exon

LOC120099588
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC120099588
product: uncharacterized LOC120099588
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498716.1
SIO_010081: LOC120099588
subclass of: SO_0000673
so part of: LOC120099588
location: complement(join(13302657..13303045,13303237..13303324,13303825..13304710))
location: region:13302657-13304710:-1
so has part: feature:13303825-13304710:-1:exon
so has part: feature:13303237-13303324:-1:exon
so has part: feature:13302657-13303045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13303825-13304710:-1:exon

position:13303825:-1
position: 13303825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13303237-13303324:-1:exon

position:13303237:-1
position: 13303237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13303324:-1
position: 13303324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13302657-13303045:-1:exon

position:13303045:-1
position: 13303045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120099614
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099614
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(13696761..13697443)
location: region:13696761-13697443:-1
so has part: feature:13696761-13697443:-1:exon

120099614
type: Gene
SIO_000068: ncbigene

position:13696761:-1
position: 13696761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13697443:-1
position: 13697443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13696761-13697443:-1:exon

LOC120099614
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099614
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120099614
subclass of: SO_0000673
so part of: LOC120099614
location: complement(13696761..13696975)
location: region:13696761-13696975:-1
so has part: feature:13696761-13696975:-1:exon

position:13696975:-1
position: 13696975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13696761-13696975:-1:exon

LOC120099614
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099614
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120099614
subclass of: SO_0000673
so part of: LOC120099614
location: complement(13697106..13697443)
location: region:13697106-13697443:-1
so has part: feature:13697106-13697443:-1:exon

position:13697106:-1
position: 13697106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13697106-13697443:-1:exon

LOC103694804
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694804
note: cofilin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 13750420..13751025
location: region:13750420-13751025:1
so has part: feature:13750420-13751025:1:exon

103694804
type: Gene
SIO_000068: ncbigene

9166093
type: RGD
SIO_000068: rgd

position:13750420:1
position: 13750420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13751025:1
position: 13751025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13750420-13751025:1:exon

LOC103694805
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694805
note: polyglutamine-binding protein 1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(13762982..13774233)
location: region:13762982-13774233:-1
so has part: feature:13762982-13774233:-1:exon

103694805
type: Gene
SIO_000068: ncbigene

9396464
type: RGD
SIO_000068: rgd

position:13762982:-1
position: 13762982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13774233:-1
position: 13774233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13762982-13774233:-1:exon

LOC103694806
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694806
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 14003156..14003479
location: region:14003156-14003479:1
so has part: feature:14003156-14003479:1:exon

103694806
type: Gene
SIO_000068: ncbigene

9424207
type: RGD
SIO_000068: rgd

position:14003156:1
position: 14003156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14003479:1
position: 14003479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14003156-14003479:1:exon

LOC108353401
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC108353401
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 14178275..14178602
location: region:14178275-14178602:1
so has part: feature:14178275-14178602:1:exon

108353401
type: Gene
SIO_000068: ncbigene

11383786
type: RGD
SIO_000068: rgd

position:14178275:1
position: 14178275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14178602:1
position: 14178602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14178275-14178602:1:exon

LOC103694807
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694807
note: vomeronasal type-2 receptor 116-like; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 14214032..14216205
location: region:14214032-14216205:1
so has part: feature:14214032-14216205:1:exon

103694807
type: Gene
SIO_000068: ncbigene

9455360
type: RGD
SIO_000068: rgd

position:14214032:1
position: 14214032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14216205:1
position: 14216205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14214032-14216205:1:exon

LOC103694808
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694808
note: vomeronasal type-2 receptor 116-like; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 14217202..14220222
location: region:14217202-14220222:1
so has part: feature:14217202-14220222:1:exon

103694808
type: Gene
SIO_000068: ncbigene

9426959
type: RGD
SIO_000068: rgd

position:14217202:1
position: 14217202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14220222:1
position: 14220222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14217202-14220222:1:exon

LOC103694782
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 14471377..14485290
location: region:14471377-14485290:1
so has part: feature:14471377-14485290:1:exon
subclass of: SO_0000011

103694782
type: Gene
SIO_000068: ncbigene

9368204
type: RGD
SIO_000068: rgd

position:14471377:1
position: 14471377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14485290:1
position: 14485290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14471377-14485290:1:exon

LOC103694782
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694782
product: uncharacterized LOC103694782, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498726.1
SIO_010081: LOC103694782
subclass of: SO_0000673
so part of: LOC103694782
location: join(14471377..14471692,14472330..14474737,14475423..14476845,14478305..14478394,14480117..14480362,14480449..14480607,14482689..14482890,14484753..14485290)
location: region:14471377-14485290:1
so has part: feature:14471377-14471692:1:exon
so has part: feature:14472330-14474737:1:exon
so has part: feature:14475423-14476845:1:exon
so has part: feature:14478305-14478394:1:exon
so has part: feature:14480117-14480362:1:exon
so has part: feature:14480449-14480607:1:exon
so has part: feature:14482689-14482890:1:exon
so has part: feature:14484753-14485290:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14471377-14471692:1:exon

position:14471692:1
position: 14471692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14472330-14474737:1:exon

position:14472330:1
position: 14472330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14474737:1
position: 14474737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14475423-14476845:1:exon

position:14475423:1
position: 14475423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14476845:1
position: 14476845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14478305-14478394:1:exon

position:14478305:1
position: 14478305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14478394:1
position: 14478394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14480117-14480362:1:exon

position:14480117:1
position: 14480117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14480362:1
position: 14480362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14480449-14480607:1:exon

position:14480449:1
position: 14480449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14480607:1
position: 14480607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14482689-14482890:1:exon

position:14482689:1
position: 14482689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14482890:1
position: 14482890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14484753-14485290:1:exon

position:14484753:1
position: 14484753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103694782
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694782
product: uncharacterized LOC103694782, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498725.1
SIO_010081: LOC103694782
subclass of: SO_0000673
so part of: LOC103694782
location: join(14471380..14471692,14472330..14474737,14475423..14476442,14476713..14476845,14478305..14478394,14480117..14480358,14480449..14480607,14482689..14482890,14484753..14485290)
location: region:14471380-14485290:1
so has part: feature:14471380-14471692:1:exon
so has part: feature:14472330-14474737:1:exon
so has part: feature:14475423-14476442:1:exon
so has part: feature:14476713-14476845:1:exon
so has part: feature:14478305-14478394:1:exon
so has part: feature:14480117-14480358:1:exon
so has part: feature:14480449-14480607:1:exon
so has part: feature:14482689-14482890:1:exon
so has part: feature:14484753-14485290:1:exon

position:14471380:1
position: 14471380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14471380-14471692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14472330-14474737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14475423-14476442:1:exon

position:14476442:1
position: 14476442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14476713-14476845:1:exon

position:14476713:1
position: 14476713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14478305-14478394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14480117-14480358:1:exon

position:14480358:1
position: 14480358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14480449-14480607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14482689-14482890:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14484753-14485290:1:exon

LOC103694782
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694782
product: uncharacterized LOC103694782, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498724.1
SIO_010081: LOC103694782
subclass of: SO_0000673
so part of: LOC103694782
location: join(14471382..14471692,14472330..14474737,14475423..14476845,14478305..14478394,14480117..14480358,14480449..14480607,14484753..14485290)
location: region:14471382-14485290:1
so has part: feature:14471382-14471692:1:exon
so has part: feature:14472330-14474737:1:exon
so has part: feature:14475423-14476845:1:exon
so has part: feature:14478305-14478394:1:exon
so has part: feature:14480117-14480358:1:exon
so has part: feature:14480449-14480607:1:exon
so has part: feature:14484753-14485290:1:exon

position:14471382:1
position: 14471382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14471382-14471692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14472330-14474737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14475423-14476845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14478305-14478394:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14480117-14480358:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14480449-14480607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14484753-14485290:1:exon

LOC103694782
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694782
product: uncharacterized LOC103694782, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498722.1
SIO_010081: LOC103694782
subclass of: SO_0000673
so part of: LOC103694782
location: join(14471383..14471692,14472330..14474737,14475423..14476845,14478305..14478394,14480117..14480358,14480449..14480607,14482689..14482890,14484753..14485290)
location: region:14471383-14485290:1
so has part: feature:14471383-14471692:1:exon
so has part: feature:14472330-14474737:1:exon
so has part: feature:14475423-14476845:1:exon
so has part: feature:14478305-14478394:1:exon
so has part: feature:14480117-14480358:1:exon
so has part: feature:14480449-14480607:1:exon
so has part: feature:14482689-14482890:1:exon
so has part: feature:14484753-14485290:1:exon

position:14471383:1
position: 14471383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14471383-14471692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14472330-14474737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14475423-14476845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14478305-14478394:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14480117-14480358:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14480449-14480607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14482689-14482890:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14484753-14485290:1:exon

LOC103694782
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694782
product: uncharacterized LOC103694782, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_597965.3
SIO_010081: LOC103694782
subclass of: SO_0000673
so part of: LOC103694782
location: join(14471383..14471692,14472330..14474737,14475423..14476845,14480117..14480358,14480449..14480607,14482689..14482890,14484753..14485290)
location: region:14471383-14485290:1
so has part: feature:14471383-14471692:1:exon
so has part: feature:14472330-14474737:1:exon
so has part: feature:14475423-14476845:1:exon
so has part: feature:14480117-14480358:1:exon
so has part: feature:14480449-14480607:1:exon
so has part: feature:14482689-14482890:1:exon
so has part: feature:14484753-14485290:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14471383-14471692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14472330-14474737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14475423-14476845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14480117-14480358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14480449-14480607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14482689-14482890:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14484753-14485290:1:exon

LOC103694782
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694782
product: uncharacterized LOC103694782, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498723.1
SIO_010081: LOC103694782
subclass of: SO_0000673
so part of: LOC103694782
location: join(14471461..14471692,14472330..14472580,14475423..14476845,14478305..14478394,14480117..14480358,14480449..14480607,14482689..14482890,14484753..14485290)
location: region:14471461-14485290:1
so has part: feature:14471461-14471692:1:exon
so has part: feature:14472330-14472580:1:exon
so has part: feature:14475423-14476845:1:exon
so has part: feature:14478305-14478394:1:exon
so has part: feature:14480117-14480358:1:exon
so has part: feature:14480449-14480607:1:exon
so has part: feature:14482689-14482890:1:exon
so has part: feature:14484753-14485290:1:exon

position:14471461:1
position: 14471461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14471461-14471692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14472330-14472580:1:exon

position:14472580:1
position: 14472580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14475423-14476845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14478305-14478394:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14480117-14480358:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14480449-14480607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14482689-14482890:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14484753-14485290:1:exon

LOC103694812
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694812
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 14579164..14579502
location: region:14579164-14579502:1
so has part: feature:14579164-14579502:1:exon

103694812
type: Gene
SIO_000068: ncbigene

9442973
type: RGD
SIO_000068: rgd

position:14579164:1
position: 14579164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14579502:1
position: 14579502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14579164-14579502:1:exon

LOC103694788
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694788
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 15020111..15020434
location: region:15020111-15020434:1
so has part: feature:15020111-15020434:1:exon

103694788
type: Gene
SIO_000068: ncbigene

9458719
type: RGD
SIO_000068: rgd

position:15020111:1
position: 15020111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15020434:1
position: 15020434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15020111-15020434:1:exon

LOC108353406
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC108353406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 15034806..15038573
location: region:15034806-15038573:1
so has part: feature:15034806-15038573:1:exon

108353406
type: Gene
SIO_000068: ncbigene

11421505
type: RGD
SIO_000068: rgd

position:15034806:1
position: 15034806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15038573:1
position: 15038573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15034806-15038573:1:exon

LOC108353406
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC108353406
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC108353406
subclass of: SO_0000673
so part of: LOC108353406
location: 15034806..15034825
location: region:15034806-15034825:1
so has part: feature:15034806-15034825:1:exon

position:15034825:1
position: 15034825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15034806-15034825:1:exon

LOC108353406
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC108353406
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC108353406
subclass of: SO_0000673
so part of: LOC108353406
location: 15035730..15035896
location: region:15035730-15035896:1
so has part: feature:15035730-15035896:1:exon

position:15035730:1
position: 15035730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15035896:1
position: 15035896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15035730-15035896:1:exon

LOC108353406
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC108353406
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC108353406
subclass of: SO_0000673
so part of: LOC108353406
location: 15037912..15038573
location: region:15037912-15038573:1
so has part: feature:15037912-15038573:1:exon

position:15037912:1
position: 15037912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15037912-15038573:1:exon

LOC103694790
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15314019..15340150)
location: region:15314019-15340150:-1
so has part: feature:15314019-15340150:-1:exon
subclass of: SO_0000011

103694790
type: Gene
SIO_000068: ncbigene

9442972
type: RGD
SIO_000068: rgd

position:15314019:-1
position: 15314019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15340150:-1
position: 15340150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15314019-15340150:-1:exon

LOC103694790
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694790
product: uncharacterized LOC103694790, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498735.1
SIO_010081: LOC103694790
subclass of: SO_0000673
so part of: LOC103694790
location: complement(join(15314019..15314827,15320046..15321038,15321264..15321350,15336510..15336713,15339677..15340150))
location: region:15314019-15340150:-1
so has part: feature:15339677-15340150:-1:exon
so has part: feature:15336510-15336713:-1:exon
so has part: feature:15321264-15321350:-1:exon
so has part: feature:15320046-15321038:-1:exon
so has part: feature:15314019-15314827:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15339677-15340150:-1:exon

position:15339677:-1
position: 15339677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15336510-15336713:-1:exon

position:15336510:-1
position: 15336510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15336713:-1
position: 15336713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15321264-15321350:-1:exon

position:15321264:-1
position: 15321264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15321350:-1
position: 15321350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15320046-15321038:-1:exon

position:15320046:-1
position: 15320046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15321038:-1
position: 15321038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15314019-15314827:-1:exon

position:15314827:-1
position: 15314827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103694790
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694790
product: uncharacterized LOC103694790, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001842927.2
SIO_010081: LOC103694790
subclass of: SO_0000673
so part of: LOC103694790
location: complement(join(15314019..15314827,15320046..15321038,15321264..15321350,15336510..15336713,15337089..15337300,15339677..15340150))
location: region:15314019-15340150:-1
so has part: feature:15339677-15340150:-1:exon
so has part: feature:15337089-15337300:-1:exon
so has part: feature:15336510-15336713:-1:exon
so has part: feature:15321264-15321350:-1:exon
so has part: feature:15320046-15321038:-1:exon
so has part: feature:15314019-15314827:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15339677-15340150:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15337089-15337300:-1:exon

position:15337089:-1
position: 15337089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15337300:-1
position: 15337300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15336510-15336713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15321264-15321350:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15320046-15321038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15314019-15314827:-1:exon

LOC103694790
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694790
product: uncharacterized LOC103694790, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498733.1
SIO_010081: LOC103694790
subclass of: SO_0000673
so part of: LOC103694790
location: complement(join(15314019..15314827,15320046..15321038,15321202..15321350,15336510..15336713,15337089..15337300,15339677..15340150))
location: region:15314019-15340150:-1
so has part: feature:15339677-15340150:-1:exon
so has part: feature:15337089-15337300:-1:exon
so has part: feature:15336510-15336713:-1:exon
so has part: feature:15321202-15321350:-1:exon
so has part: feature:15320046-15321038:-1:exon
so has part: feature:15314019-15314827:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15339677-15340150:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15337089-15337300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15336510-15336713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15321202-15321350:-1:exon

position:15321202:-1
position: 15321202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15320046-15321038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15314019-15314827:-1:exon

LOC103694790
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694790
product: uncharacterized LOC103694790, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498734.1
SIO_010081: LOC103694790
subclass of: SO_0000673
so part of: LOC103694790
location: complement(join(15314019..15314827,15320046..15321038,15336510..15336713,15337089..15337300,15339677..15340149))
location: region:15314019-15340149:-1
so has part: feature:15339677-15340149:-1:exon
so has part: feature:15337089-15337300:-1:exon
so has part: feature:15336510-15336713:-1:exon
so has part: feature:15320046-15321038:-1:exon
so has part: feature:15314019-15314827:-1:exon

position:15340149:-1
position: 15340149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15339677-15340149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15337089-15337300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15336510-15336713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15320046-15321038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15314019-15314827:-1:exon

LOC103694790
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC103694790
product: uncharacterized LOC103694790, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498736.1
SIO_010081: LOC103694790
subclass of: SO_0000673
so part of: LOC103694790
location: complement(join(15314019..15314827,15336510..15336713,15337089..15337300,15339677..15340141))
location: region:15314019-15340141:-1
so has part: feature:15339677-15340141:-1:exon
so has part: feature:15337089-15337300:-1:exon
so has part: feature:15336510-15336713:-1:exon
so has part: feature:15314019-15314827:-1:exon

position:15340141:-1
position: 15340141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15339677-15340141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15337089-15337300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15336510-15336713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15314019-15314827:-1:exon

LOC103694811
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694811
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 15598691..15599027
location: region:15598691-15599027:1
so has part: feature:15598691-15599027:1:exon

103694811
type: Gene
SIO_000068: ncbigene

9234328
type: RGD
SIO_000068: rgd

position:15598691:1
position: 15598691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15599027:1
position: 15599027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15598691-15599027:1:exon

LOC120099615
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099615
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15603479..15611261)
location: region:15603479-15611261:-1
so has part: feature:15603479-15611261:-1:exon
subclass of: SO_0000010

120099615
type: Gene
SIO_000068: ncbigene

position:15603479:-1
position: 15603479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15611261:-1
position: 15611261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15603479-15611261:-1:exon

LOC120099615
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: LOC120099615
product: igE-binding protein-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 43% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039100691.1
SIO_010081: LOC120099615
subclass of: SO_0000673
so part of: LOC120099615
location: complement(join(15603479..15603658,15607316..15608063,15609041..15609130,15611145..15611261))
location: region:15603479-15611261:-1
so has part: feature:15611145-15611261:-1:exon
so has part: feature:15609041-15609130:-1:exon
so has part: feature:15607316-15608063:-1:exon
so has part: feature:15603479-15603658:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15611145-15611261:-1:exon

position:15611145:-1
position: 15611145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15609041-15609130:-1:exon

position:15609041:-1
position: 15609041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15609130:-1
position: 15609130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15607316-15608063:-1:exon

position:15607316:-1
position: 15607316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15608063:-1
position: 15608063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15603479-15603658:-1:exon

position:15603658:-1
position: 15603658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120099615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: LOC120099615
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: igE-binding protein-like
translation: MRKHAPANMKPLKLECRFWTRPEKMQLTLKRLDSPGSGERGTFGARNPGKRPHPHLRRPLGNKEDSELQEQKKGNKKLLQRLSPTAPPPYEACSCTFSLVPDRVKRKLRMTFPVFETQEGERVHAPVEYNQIKELAESVRKYGVTGNFNLTILERLALNYLTPADWQMIAKATLVNMGQYMEWKALWYEAAQTQARANATALTPEKREWTFELLTGQGCFPADQTNYHWGAYIQVSSSAIKAWKAITRKGGADNQLTCIIQGPQEPFSDFVARMTETAGGIFGXQAAPLIEQLVYEQATQECRAAIAPRKNKGLQDRLRDNENPLWVPGRLTWNIKTEDQEDDNSGDPHADPGSANKSAERTTVGNNVNLPPPDAGDV
SIO_010081: LOC120099615
subclass of: SO_0000673
so part of: LOC120099615
location: complement(join(15603479..15603658,15607316..15608063,15609041..15609130,15611145..15611261))
location: region:15603479-15611261:-1
so has part: feature:15611145-15611261:-1:exon
so has part: feature:15609041-15609130:-1:exon
so has part: feature:15607316-15608063:-1:exon
so has part: feature:15603479-15603658:-1:exon

XP_038956619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15611145-15611261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15609041-15609130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15607316-15608063:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15603479-15603658:-1:exon

LOC120099600
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 15648948..15650454
location: region:15648948-15650454:1
so has part: feature:15648948-15650454:1:exon

120099600
type: Gene
SIO_000068: ncbigene

position:15648948:1
position: 15648948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15650454:1
position: 15650454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15648948-15650454:1:exon

LOC120099600
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC120099600
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120099600
subclass of: SO_0000673
so part of: LOC120099600
location: 15648948..15650454
location: region:15648948-15650454:1
so has part: feature:15648948-15650454:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15648948-15650454:1:exon

LOC120099591
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15694005..15697188)
location: region:15694005-15697188:-1
so has part: feature:15694005-15697188:-1:exon
subclass of: SO_0000010

120099591
type: Gene
SIO_000068: ncbigene

position:15694005:-1
position: 15694005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15697188:-1
position: 15697188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15694005-15697188:-1:exon

LOC120099591
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: LOC120099591
product: endogenous retrovirus group K member 21 Env polyprotein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_039100664.1
SIO_010081: LOC120099591
subclass of: SO_0000673
so part of: LOC120099591
location: complement(join(15694005..15695203,15696374..15697188))
location: region:15694005-15697188:-1
so has part: feature:15696374-15697188:-1:exon
so has part: feature:15694005-15695203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15696374-15697188:-1:exon

position:15696374:-1
position: 15696374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15694005-15695203:-1:exon

position:15695203:-1
position: 15695203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120099591
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10116
gene: LOC120099591
product: endogenous retrovirus group K member 21 Env polyprotein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039100663.1
SIO_010081: LOC120099591
subclass of: SO_0000673
so part of: LOC120099591
location: complement(15694005..15697180)
location: region:15694005-15697180:-1
so has part: feature:15694005-15697180:-1:exon

position:15697180:-1
position: 15697180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15694005-15697180:-1:exon

LOC120099591
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: LOC120099591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endogenous retrovirus group K member 19 Env polyprotein-like isoform X2
translation: MLVFSHRMPNHQFGSQTDSSGQPKETDIRPPRRKRPNRRIMRNLAKKIKATRLEPKIKPRQTPTWTQLKTLTAQAKEVLKAAHAPETATLLFVAMLAVMSAPTALGESYWAYLPKPPILHPVGWEVSDHIKVLTNQTLVIGGSPDFHLLKNSSGYVDFEGKSDSLPICFSFSPSVPVGCFQVGKSVFNTDTPTLDNTKPDGKGNGRRMWELWMTTMCDKEEKSQHYTTAKNLPPRYPHCRAAFKKDALWEGDENAFPRWLPCAFPDNGIPLPRFKQISIWCFLKKKKRRNCHACSRDNRAPGQT
SIO_010081: LOC120099591
subclass of: SO_0000673
so part of: LOC120099591
location: complement(join(15695093..15695203,15696374..15697177))
location: region:15695093-15697177:-1
so has part: feature:15696374-15697177:-1:exon
so has part: feature:15695093-15695203:-1:exon

XP_038956592.1
type: Protein
SIO_000068: ncbiprotein

position:15695093:-1
position: 15695093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15697177:-1
position: 15697177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15696374-15697177:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15695093-15695203:-1:exon

LOC120099591
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10116
gene: LOC120099591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endogenous retrovirus group K member 21 Env polyprotein-like isoform X1
translation: MLVFSHRMPNHQFGSQTDSSGQPKETDIRPPRRKRPNRRIMRNLAKKIKATRLEPKIKPRQTPTWTQLKTLTAQAKEVLKAAHAPETATLLFVAMLAVMSAPTALGESYWAYLPKPPILHPVGWEVSDHIKVLTNQTLVIGGSPDFHLLKNSSGYVDFEGKSDSLPICFSFSPSVPVGCFQVGKSVFNTDTPTLDNTKPDGKGNGRRMWELWMTTMCDKEEKSQHYTTAKNLPPRYPHCRAAFKKDALWEGDENAFPRWLPCAFPDNGVRFSTLGAAGLLWDFSMSSSDKDQNNYLSTNSKLYGNYVPPVGKPIKRWYDAGWVEPTWFWEPLHTDLPDRQNKPLIEHPELFRLVASSEKLLLKKPGAADYDAVSVSACVTYPYAILVGFPQLISIDKVESIFSIKCTPCKLTNCIDSTVSGSVILIVRRPPYVLLPVDLGDEPWFDDSAIQTIRYATGLIRAKRFVAALILGIPALISIVTSFAVSTTALVKEMQTATFVNDLHKNVTLALSEQKIIDLKLETRLNALEEVVLELGQDVVNIKTRMATRCHANYDFICVTPLPYNATENGKGPNHIC
SIO_010081: LOC120099591
subclass of: SO_0000673
so part of: LOC120099591
location: complement(15695444..15697177)
location: region:15695444-15697177:-1
so has part: feature:15695444-15697177:-1:exon

XP_038956591.1
type: Protein
SIO_000068: ncbiprotein

position:15695444:-1
position: 15695444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15695444-15697177:-1:exon

LOC103694814
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694814
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(17004864..17005191)
location: region:17004864-17005191:-1
so has part: feature:17004864-17005191:-1:exon

103694814
type: Gene
SIO_000068: ncbigene

9389473
type: RGD
SIO_000068: rgd

position:17004864:-1
position: 17004864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17005191:-1
position: 17005191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17004864-17005191:-1:exon

LOC103694815
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694815
note: glutaredoxin-1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(17016853..17017188)
location: region:17016853-17017188:-1
so has part: feature:17016853-17017188:-1:exon

103694815
type: Gene
SIO_000068: ncbigene

9463310
type: RGD
SIO_000068: rgd

position:17016853:-1
position: 17016853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17017188:-1
position: 17017188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17016853-17017188:-1:exon

LOC103694795
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694795
note: 60S ribosomal protein L35a pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(17513689..17514047)
location: region:17513689-17514047:-1
so has part: feature:17513689-17514047:-1:exon

103694795
type: Gene
SIO_000068: ncbigene

9260709
type: RGD
SIO_000068: rgd

position:17513689:-1
position: 17513689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17514047:-1
position: 17514047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17513689-17514047:-1:exon

LOC108353414
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC108353414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 17524261..17524590
location: region:17524261-17524590:1
so has part: feature:17524261-17524590:1:exon

108353414
type: Gene
SIO_000068: ncbigene

11493411
type: RGD
SIO_000068: rgd

position:17524261:1
position: 17524261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17524590:1
position: 17524590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17524261-17524590:1:exon

LOC108353414
type: Exon
subclass of: SO_0000147
RO_0002162: 10116
gene: LOC108353414
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC108353414
subclass of: SO_0000673
so part of: LOC108353414
location: 17524261..17524590
location: region:17524261-17524590:1
so has part: feature:17524261-17524590:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17524261-17524590:1:exon

LOC120099597
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC120099597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(18260839..18266569)
location: region:18260839-18266569:-1
so has part: feature:18260839-18266569:-1:exon
subclass of: SO_0000011

120099597
type: Gene
SIO_000068: ncbigene

position:18260839:-1
position: 18260839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18266569:-1
position: 18266569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18260839-18266569:-1:exon

LOC120099597
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10116
nc RNA class: lncRNA
gene: LOC120099597
product: uncharacterized LOC120099597
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005498731.1
SIO_010081: LOC120099597
subclass of: SO_0000673
so part of: LOC120099597
location: complement(join(18260839..18261004,18266116..18266264,18266435..18266569))
location: region:18260839-18266569:-1
so has part: feature:18266435-18266569:-1:exon
so has part: feature:18266116-18266264:-1:exon
so has part: feature:18260839-18261004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18266435-18266569:-1:exon

position:18266435:-1
position: 18266435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18266116-18266264:-1:exon

position:18266116:-1
position: 18266116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18266264:-1
position: 18266264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18260839-18261004:-1:exon

position:18261004:-1
position: 18261004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103694818
type: Gene
subclass of: SO_0000704
RO_0002162: 10116
gene: LOC103694818
note: hepatitis A virus cellular receptor 2 homolog pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(18278203..18279473)
location: region:18278203-18279473:-1
so has part: feature:18278203-18279473:-1:exon

103694818
type: Gene
SIO_000068: ncbigene

9215301
type: RGD
SIO_000068: rgd

position:18278203:-1
position: 18278203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18279473:-1
position: 18279473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18278203-18279473:-1:exon