Mus pahari chromosome 22, PAHARI_EIJ_v1.1, whole genome shotgun sequence.
type: Entry
definition: Mus pahari chromosome 22, PAHARI_EIJ_v1.1, whole genome shotgun sequence.
sequence version: NC_034611.1
sequence date: 2019-06-19
sequence: sequence
division: CON
label: NC_034611.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA387191
dblink: SAMEA3367645
keyword: WGS
keyword: RefSeq
source: Mus pahari (shrew mouse)
organism: Mus pahari
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLT608303.1.\nAssembly name: PAHARI_EIJ_v1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the EBI on 2017/04/28. The\noriginal whole-genome shotgun project has the accession\nFMBV00000000.2.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Mus pahari Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 50160631
topology: linear
so has quality: SO_0000987
location: 1..50160631
location: region:1-50160631:1
RO_0002162: 10093

NC_034611
type: RefSeq
SIO_000068: refseq

PRJNA387191
type: BioProject
SIO_000068: bioproject

SAMEA3367645
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50160631:1
position: 50160631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-50160631:1:source
so part of: sequence
organism: Mus pahari
mol type: genomic DNA
chromosome: 22
sex: female
tissue type: tail

10093
type: Taxonomy
SIO_000068: taxonomy

Crispld1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Crispld1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(192977..230205)
location: region:192977-230205:-1
so has part: feature:192977-230205:-1:exon
subclass of: SO_0000010

110338664
type: Gene
SIO_000068: ncbigene

position:192977:-1
position: 192977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230205:-1
position: 230205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192977-230205:-1:exon

Crispld1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Crispld1
product: cysteine rich secretory protein LCCL domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 17 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021222037.1
SIO_010081: Crispld1
subclass of: SO_0000673
so part of: Crispld1
location: complement(join(192977..193592,194720..194850,200366..200441,203176..203248,203335..203378,205476..205606,205844..205910,206008..206068,206659..206799,208766..208866,209523..209638,210468..210600,210908..211026,228400..228720,229549..230205))
location: region:192977-230205:-1
so has part: feature:229549-230205:-1:exon
so has part: feature:228400-228720:-1:exon
so has part: feature:210908-211026:-1:exon
so has part: feature:210468-210600:-1:exon
so has part: feature:209523-209638:-1:exon
so has part: feature:208766-208866:-1:exon
so has part: feature:206659-206799:-1:exon
so has part: feature:206008-206068:-1:exon
so has part: feature:205844-205910:-1:exon
so has part: feature:205476-205606:-1:exon
so has part: feature:203335-203378:-1:exon
so has part: feature:203176-203248:-1:exon
so has part: feature:200366-200441:-1:exon
so has part: feature:194720-194850:-1:exon
so has part: feature:192977-193592:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229549-230205:-1:exon

position:229549:-1
position: 229549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:228400-228720:-1:exon

position:228400:-1
position: 228400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228720:-1
position: 228720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:210908-211026:-1:exon

position:210908:-1
position: 210908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211026:-1
position: 211026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:210468-210600:-1:exon

position:210468:-1
position: 210468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210600:-1
position: 210600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:209523-209638:-1:exon

position:209523:-1
position: 209523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209638:-1
position: 209638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:208766-208866:-1:exon

position:208766:-1
position: 208766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208866:-1
position: 208866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:206659-206799:-1:exon

position:206659:-1
position: 206659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206799:-1
position: 206799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:206008-206068:-1:exon

position:206008:-1
position: 206008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206068:-1
position: 206068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:205844-205910:-1:exon

position:205844:-1
position: 205844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205910:-1
position: 205910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:205476-205606:-1:exon

position:205476:-1
position: 205476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205606:-1
position: 205606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:203335-203378:-1:exon

position:203335:-1
position: 203335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203378:-1
position: 203378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:203176-203248:-1:exon

position:203176:-1
position: 203176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203248:-1
position: 203248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:200366-200441:-1:exon

position:200366:-1
position: 200366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200441:-1
position: 200441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:194720-194850:-1:exon

position:194720:-1
position: 194720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194850:-1
position: 194850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:192977-193592:-1:exon

position:193592:-1
position: 193592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Crispld1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Crispld1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich secretory protein LCCL domain-containing 1
translation: MMCKAQEWLRVTALLFVARAVPAMVVPNATLLEKLLEKYMDEDGEWWTAKQRGKRAITDNDMQSILDLHNKLRSQVYPTASNMEYMTWDVELERSAESWAEMCLWEHGPTSLLPSIGQNLGAHWGRYRPPTFHVQAWYDEVRDFSYPYENECDPYCPFRCSGPVCTHYTQVVWATSSRIGCAINLCHNMNIWGQIWPKAVYLVCNYSPKGNWWGHAPYKHGRPCSACPPSFGGGCRENLCYKEGSDRYYTPREEETNEIERQQSQVHDTHVRTRSDDSDRNDVISTQQMSQIVSCEVRLRDQCKGTTCNRYECPAGCLDSKAKVIGSVHYEMQSSICRAAIHYGIIDNEGGWVDVTRQGRKHYFIKSNRNGIQTIGKYHSANSFTVSKVTVQAVTCETTVEQLCPFHKPASHCPRVYCPRNCMQSNPHYARVIGSRVYSDLSSICRAAVHAGVVRNHGGYVDVMPVDKRKMYTASFQNGIFSESLQNPTGGKAFRVFAVV
SIO_010081: Crispld1
subclass of: SO_0000673
so part of: Crispld1
location: complement(join(193541..193592,194720..194850,200366..200441,203176..203248,203335..203378,205476..205606,205844..205910,206008..206068,206659..206799,208766..208866,209523..209638,210468..210600,210908..211026,228400..228657))
location: region:193541-228657:-1
so has part: feature:228400-228657:-1:exon
so has part: feature:210908-211026:-1:exon
so has part: feature:210468-210600:-1:exon
so has part: feature:209523-209638:-1:exon
so has part: feature:208766-208866:-1:exon
so has part: feature:206659-206799:-1:exon
so has part: feature:206008-206068:-1:exon
so has part: feature:205844-205910:-1:exon
so has part: feature:205476-205606:-1:exon
so has part: feature:203335-203378:-1:exon
so has part: feature:203176-203248:-1:exon
so has part: feature:200366-200441:-1:exon
so has part: feature:194720-194850:-1:exon
so has part: feature:193541-193592:-1:exon

XP_021077696.1
type: Protein
SIO_000068: ncbiprotein

position:193541:-1
position: 193541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228657:-1
position: 228657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228400-228657:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210908-211026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210468-210600:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209523-209638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:208766-208866:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206659-206799:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206008-206068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205844-205910:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:205476-205606:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:203335-203378:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:203176-203248:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:200366-200441:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:194720-194850:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:193541-193592:-1:exon

LOC110338863
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110338863
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 297771..299502
location: region:297771-299502:1
so has part: feature:297771-299502:1:exon

110338863
type: Gene
SIO_000068: ncbigene

position:297771:1
position: 297771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299502:1
position: 299502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297771-299502:1:exon

LOC110338863
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338863
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110338863
subclass of: SO_0000673
so part of: LOC110338863
location: 297771..299502
location: region:297771-299502:1
so has part: feature:297771-299502:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:297771-299502:1:exon

Pi15
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Pi15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(328328..350767)
location: region:328328-350767:-1
so has part: feature:328328-350767:-1:exon
subclass of: SO_0000010

110338899
type: Gene
SIO_000068: ncbigene

position:328328:-1
position: 328328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350767:-1
position: 350767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328328-350767:-1:exon

Pi15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Pi15
product: peptidase inhibitor 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 8 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021222367.2
SIO_010081: Pi15
subclass of: SO_0000673
so part of: Pi15
location: complement(join(328328..329310,332543..332658,332772..332904,333807..333925,349768..350075,350626..350767))
location: region:328328-350767:-1
so has part: feature:350626-350767:-1:exon
so has part: feature:349768-350075:-1:exon
so has part: feature:333807-333925:-1:exon
so has part: feature:332772-332904:-1:exon
so has part: feature:332543-332658:-1:exon
so has part: feature:328328-329310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:350626-350767:-1:exon

position:350626:-1
position: 350626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:349768-350075:-1:exon

position:349768:-1
position: 349768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350075:-1
position: 350075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:333807-333925:-1:exon

position:333807:-1
position: 333807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333925:-1
position: 333925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:332772-332904:-1:exon

position:332772:-1
position: 332772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332904:-1
position: 332904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:332543-332658:-1:exon

position:332543:-1
position: 332543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332658:-1
position: 332658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:328328-329310:-1:exon

position:329310:-1
position: 329310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pi15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Pi15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidase inhibitor 15
translation: MQSWRTSPSLKMIMISAVSLVILLSLLCEAHTVVLLNSTDSSLPANNFTDTEAALRASLESSDIPKPRQKRYISQNDMIAILDYHNQVRGKVFPPAANMEYMVWDENLAKSAEAWAATCIWDHGPSYLLRFLGQNLSVRTGRYRSILQLVKPWYDEVKDYAFPYPQDCNPRCPMRCFGPMCTHYTQMVWATSNRIGCAIHTCQNMNVWGSVWRRAVYLVCNYAPKGNWIGEAPYKVGVPCSSCPPSYGGACTDNLCFPGVTTNYLYWFK
SIO_010081: Pi15
subclass of: SO_0000673
so part of: Pi15
location: complement(join(329175..329310,332543..332658,332772..332904,333807..333925,349768..350073))
location: region:329175-350073:-1
so has part: feature:349768-350073:-1:exon
so has part: feature:333807-333925:-1:exon
so has part: feature:332772-332904:-1:exon
so has part: feature:332543-332658:-1:exon
so has part: feature:329175-329310:-1:exon

XP_021078026.1
type: Protein
SIO_000068: ncbiprotein

position:329175:-1
position: 329175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350073:-1
position: 350073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349768-350073:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333807-333925:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332772-332904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332543-332658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:329175-329310:-1:exon

LOC115062993
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062993
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(426866..426975)
location: region:426866-426975:-1
so has part: feature:426866-426975:-1:exon

115062993
type: Gene
SIO_000068: ncbigene

position:426866:-1
position: 426866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426975:-1
position: 426975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426866-426975:-1:exon

LOC115062993
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC115062993
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC115062993
subclass of: SO_0000673
so part of: LOC115062993
location: complement(426866..426975)
location: region:426866-426975:-1
so has part: feature:426866-426975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:426866-426975:-1:exon

LOC110338997
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110338997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 502371..503201
location: region:502371-503201:1
so has part: feature:502371-503201:1:exon
subclass of: SO_0000010

110338997
type: Gene
SIO_000068: ncbigene

position:502371:1
position: 502371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503201:1
position: 503201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502371-503201:1:exon

LOC110338997
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: LOC110338997
product: peptidyl-prolyl cis-trans isomerase A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
transcript id: XM_021222457.1
SIO_010081: LOC110338997
subclass of: SO_0000673
so part of: LOC110338997
location: join(502371..502786,502985..503201)
location: region:502371-503201:1
so has part: feature:502371-502786:1:exon
so has part: feature:502985-503201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:502371-502786:1:exon

position:502786:1
position: 502786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:502985-503201:1:exon

position:502985:1
position: 502985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110338997
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: LOC110338997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase A-like
translation: MNIWLCRRHCHFSPLVIALVNPTVFYDIMAKEEPLGCFFFEQFADKVPKTAENFCALNTGETGFDYKGSSFHSIIPGFMCQGGDFTYHKGTGIRSNYRKKFEDEDFILKHTGPGILSMPNAGPNTNGPSFFICTAKNEWMDGKHVVFGKVKEVMNIVEAMEYFGSRNGKTSKKITISDCGQLYFLLTCGHFIHQTIPSVAQESTSTPSTH
SIO_010081: LOC110338997
subclass of: SO_0000673
so part of: LOC110338997
location: join(502371..502786,502985..503201)
location: region:502371-503201:1
so has part: feature:502371-502786:1:exon
so has part: feature:502985-503201:1:exon

XP_021078116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502371-502786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502985-503201:1:exon

Gdap1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Gdap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(756820..778077)
location: region:756820-778077:-1
so has part: feature:756820-778077:-1:exon
subclass of: SO_0000010

110338712
type: Gene
SIO_000068: ncbigene

position:756820:-1
position: 756820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778077:-1
position: 778077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:756820-778077:-1:exon

Gdap1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Gdap1
product: ganglioside induced differentiation associated protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 mRNAs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021222127.2
SIO_010081: Gdap1
subclass of: SO_0000673
so part of: Gdap1
location: complement(join(756820..759970,761621..761735,763078..763172,764452..764625,776249..776441,777775..778077))
location: region:756820-778077:-1
so has part: feature:777775-778077:-1:exon
so has part: feature:776249-776441:-1:exon
so has part: feature:764452-764625:-1:exon
so has part: feature:763078-763172:-1:exon
so has part: feature:761621-761735:-1:exon
so has part: feature:756820-759970:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:777775-778077:-1:exon

position:777775:-1
position: 777775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:776249-776441:-1:exon

position:776249:-1
position: 776249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776441:-1
position: 776441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:764452-764625:-1:exon

position:764452:-1
position: 764452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764625:-1
position: 764625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:763078-763172:-1:exon

position:763078:-1
position: 763078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763172:-1
position: 763172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:761621-761735:-1:exon

position:761621:-1
position: 761621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761735:-1
position: 761735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:756820-759970:-1:exon

position:759970:-1
position: 759970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Gdap1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Gdap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ganglioside-induced differentiation-associated protein 1
translation: MARRQDEARAGVPLRVEGQPDMEVRLILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSAGEVPVLVHGENIICEATQIIDYLEQTFLDERTPRLMPDEGSMYYPRVQHYRELLDSLPMDAYTHGCILHPELTVDSMIPAYATTRIRSQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGNQPWLCGESFTLADVSLAVTLHRLKFLGFARRNWGHGKRPNLETYYERVLKRKTFNKVLGHVNNILISAVLPTAFRVAKKRAPKVLGSTLVVGLLVGMGYFAFMLFRRRLGSMILALRPRPNYF
SIO_010081: Gdap1
subclass of: SO_0000673
so part of: Gdap1
location: complement(join(759588..759970,761621..761735,763078..763172,764452..764625,776249..776441,777775..777891))
location: region:759588-777891:-1
so has part: feature:777775-777891:-1:exon
so has part: feature:776249-776441:-1:exon
so has part: feature:764452-764625:-1:exon
so has part: feature:763078-763172:-1:exon
so has part: feature:761621-761735:-1:exon
so has part: feature:759588-759970:-1:exon

XP_021077786.1
type: Protein
SIO_000068: ncbiprotein

position:759588:-1
position: 759588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777891:-1
position: 777891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777775-777891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:776249-776441:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:764452-764625:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:763078-763172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761621-761735:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:759588-759970:-1:exon

Jph1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Jph1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 826232..916861
location: region:826232-916861:1
so has part: feature:826232-916861:1:exon
subclass of: SO_0000010

110338788
type: Gene
SIO_000068: ncbigene

position:826232:1
position: 826232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916861:1
position: 916861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826232-916861:1:exon

Jph1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Jph1
product: junctophilin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029533422.1
SIO_010081: Jph1
subclass of: SO_0000673
so part of: Jph1
location: join(826232..826895,832130..832889,895176..895294,907571..908196,914305..914400,914793..916861)
location: region:826232-916861:1
so has part: feature:826232-826895:1:exon
so has part: feature:832130-832889:1:exon
so has part: feature:895176-895294:1:exon
so has part: feature:907571-908196:1:exon
so has part: feature:914305-914400:1:exon
so has part: feature:914793-916861:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:826232-826895:1:exon

position:826895:1
position: 826895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:832130-832889:1:exon

position:832130:1
position: 832130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832889:1
position: 832889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:895176-895294:1:exon

position:895176:1
position: 895176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895294:1
position: 895294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:907571-908196:1:exon

position:907571:1
position: 907571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908196:1
position: 908196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:914305-914400:1:exon

position:914305:1
position: 914305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914400:1
position: 914400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:914793-916861:1:exon

position:914793:1
position: 914793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Jph1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Jph1
product: junctophilin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021222234.2
SIO_010081: Jph1
subclass of: SO_0000673
so part of: Jph1
location: join(826232..826895,832130..832889,895176..895294,907571..908196,914305..914400,914796..916861)
location: region:826232-916861:1
so has part: feature:826232-826895:1:exon
so has part: feature:832130-832889:1:exon
so has part: feature:895176-895294:1:exon
so has part: feature:907571-908196:1:exon
so has part: feature:914305-914400:1:exon
so has part: feature:914796-916861:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:826232-826895:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:832130-832889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:895176-895294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:907571-908196:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914305-914400:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:914796-916861:1:exon

position:914796:1
position: 914796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Jph1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Jph1
product: junctophilin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029533423.1
SIO_010081: Jph1
subclass of: SO_0000673
so part of: Jph1
location: join(826232..826895,832130..832889,895176..895294,907571..908196,914305..914400,914948..916861)
location: region:826232-916861:1
so has part: feature:826232-826895:1:exon
so has part: feature:832130-832889:1:exon
so has part: feature:895176-895294:1:exon
so has part: feature:907571-908196:1:exon
so has part: feature:914305-914400:1:exon
so has part: feature:914948-916861:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:826232-826895:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:832130-832889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:895176-895294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:907571-908196:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914305-914400:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:914948-916861:1:exon

position:914948:1
position: 914948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Jph1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Jph1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: junctophilin-1
translation: MTGGRFDFDDGGTYCGGWEEGKAHGHGICTGPKGQGEYSGSWSHGFEVVGVYTWPSGNTYQGYWAQGKRHGLGVETKGKWMYRGEWSHGFKGRYGVRQSLCTPARYEGTWSNGLQDGYGVETYGDGGTYQGQWAGGMRHGYGVRQSVPYGMATVIRSPLRTSLASLRSEQSNGSLLHEAAAAAADSPAGTRGGFVLNFHADTELGKKKGGLFRRGSLLGSMKLRKSESKSSISSKRSSVRSDAAMSRISSSDANSTISFGDVDCDFCPVEDHVDATTTETYMGEWKNDKRNGFGISERSNGMKYEGEWANNKRHGYGCTVFPDGSKEEGKYKNNILVRGIRKQLIPIRNTKTREKVDRAIEGAQRAAAMARTKVEIANSRTAHARAKADAADQAALAARQECDIARAVARELSPDFYQPGPDYVKQRCQEGVDIKENPEEKVLEKPPSPKESPHFYRKGTTPPRSPEASPKQSHSPQPSPPESSKKQNPSPGARLSQDKQSLAEEQVTAFVTKPSKELGTSVSKYSGRHYVPNPSNGELHSQYHGYYVKLNTPQHPPEDREKDKGVSQSSSALVPRPSPNKWGPPKSVTKPVAKESKTEPKAKKSELAIPKNPASNDTCPSLEKEANSGPNSIMIVLVMLLNIGLAILFVHFLT
SIO_010081: Jph1
subclass of: SO_0000673
so part of: Jph1
location: join(826517..826895,832130..832889,895176..895294,907571..908196,914305..914385)
location: region:826517-914385:1
so has part: feature:826517-826895:1:exon
so has part: feature:832130-832889:1:exon
so has part: feature:895176-895294:1:exon
so has part: feature:907571-908196:1:exon
so has part: feature:914305-914385:1:exon

XP_021077893.1
type: Protein
SIO_000068: ncbiprotein

position:826517:1
position: 826517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914385:1
position: 914385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826517-826895:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:832130-832889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:895176-895294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:907571-908196:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914305-914385:1:exon

Jph1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Jph1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: junctophilin-1
translation: MTGGRFDFDDGGTYCGGWEEGKAHGHGICTGPKGQGEYSGSWSHGFEVVGVYTWPSGNTYQGYWAQGKRHGLGVETKGKWMYRGEWSHGFKGRYGVRQSLCTPARYEGTWSNGLQDGYGVETYGDGGTYQGQWAGGMRHGYGVRQSVPYGMATVIRSPLRTSLASLRSEQSNGSLLHEAAAAAADSPAGTRGGFVLNFHADTELGKKKGGLFRRGSLLGSMKLRKSESKSSISSKRSSVRSDAAMSRISSSDANSTISFGDVDCDFCPVEDHVDATTTETYMGEWKNDKRNGFGISERSNGMKYEGEWANNKRHGYGCTVFPDGSKEEGKYKNNILVRGIRKQLIPIRNTKTREKVDRAIEGAQRAAAMARTKVEIANSRTAHARAKADAADQAALAARQECDIARAVARELSPDFYQPGPDYVKQRCQEGVDIKENPEEKVLEKPPSPKESPHFYRKGTTPPRSPEASPKQSHSPQPSPPESSKKQNPSPGARLSQDKQSLAEEQVTAFVTKPSKELGTSVSKYSGRHYVPNPSNGELHSQYHGYYVKLNTPQHPPEDREKDKGVSQSSSALVPRPSPNKWGPPKSVTKPVAKESKTEPKAKKSELAIPKNPASNDTCPSLEKEANSGPNSIMIVLVMLLNIGLAILFVHFLT
SIO_010081: Jph1
subclass of: SO_0000673
so part of: Jph1
location: join(826517..826895,832130..832889,895176..895294,907571..908196,914305..914385)
location: region:826517-914385:1
so has part: feature:826517-826895:1:exon
so has part: feature:832130-832889:1:exon
so has part: feature:895176-895294:1:exon
so has part: feature:907571-908196:1:exon
so has part: feature:914305-914385:1:exon

XP_029389282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:826517-826895:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:832130-832889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:895176-895294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:907571-908196:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914305-914385:1:exon

Jph1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Jph1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: junctophilin-1
translation: MTGGRFDFDDGGTYCGGWEEGKAHGHGICTGPKGQGEYSGSWSHGFEVVGVYTWPSGNTYQGYWAQGKRHGLGVETKGKWMYRGEWSHGFKGRYGVRQSLCTPARYEGTWSNGLQDGYGVETYGDGGTYQGQWAGGMRHGYGVRQSVPYGMATVIRSPLRTSLASLRSEQSNGSLLHEAAAAAADSPAGTRGGFVLNFHADTELGKKKGGLFRRGSLLGSMKLRKSESKSSISSKRSSVRSDAAMSRISSSDANSTISFGDVDCDFCPVEDHVDATTTETYMGEWKNDKRNGFGISERSNGMKYEGEWANNKRHGYGCTVFPDGSKEEGKYKNNILVRGIRKQLIPIRNTKTREKVDRAIEGAQRAAAMARTKVEIANSRTAHARAKADAADQAALAARQECDIARAVARELSPDFYQPGPDYVKQRCQEGVDIKENPEEKVLEKPPSPKESPHFYRKGTTPPRSPEASPKQSHSPQPSPPESSKKQNPSPGARLSQDKQSLAEEQVTAFVTKPSKELGTSVSKYSGRHYVPNPSNGELHSQYHGYYVKLNTPQHPPEDREKDKGVSQSSSALVPRPSPNKWGPPKSVTKPVAKESKTEPKAKKSELAIPKNPASNDTCPSLEKEANSGPNSIMIVLVMLLNIGLAILFVHFLT
SIO_010081: Jph1
subclass of: SO_0000673
so part of: Jph1
location: join(826517..826895,832130..832889,895176..895294,907571..908196,914305..914385)
location: region:826517-914385:1
so has part: feature:826517-826895:1:exon
so has part: feature:832130-832889:1:exon
so has part: feature:895176-895294:1:exon
so has part: feature:907571-908196:1:exon
so has part: feature:914305-914385:1:exon

XP_029389283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:826517-826895:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:832130-832889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:895176-895294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:907571-908196:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914305-914385:1:exon

LOC110338803
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110338803
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(846564..847940)
location: region:846564-847940:-1
so has part: feature:846564-847940:-1:exon

110338803
type: Gene
SIO_000068: ncbigene

position:846564:-1
position: 846564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847940:-1
position: 847940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:846564-847940:-1:exon

LOC110338803
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338803
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
pseudo: true
SIO_010081: LOC110338803
subclass of: SO_0000673
so part of: LOC110338803
location: complement(846564..846899)
location: region:846564-846899:-1
so has part: feature:846564-846899:-1:exon

position:846899:-1
position: 846899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:846564-846899:-1:exon

LOC110338803
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338803
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
pseudo: true
SIO_010081: LOC110338803
subclass of: SO_0000673
so part of: LOC110338803
location: complement(846950..847940)
location: region:846950-847940:-1
so has part: feature:846950-847940:-1:exon

position:846950:-1
position: 846950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:846950-847940:-1:exon

LOC110338999
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110338999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 977163..1003655
location: region:977163-1003655:1
so has part: feature:977163-1003655:1:exon

110338999
type: Gene
SIO_000068: ncbigene

position:977163:1
position: 977163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003655:1
position: 1003655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:977163-1003655:1:exon

LOC110338999
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338999
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110338999
subclass of: SO_0000673
so part of: LOC110338999
location: 977163..977226
location: region:977163-977226:1
so has part: feature:977163-977226:1:exon

position:977226:1
position: 977226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:977163-977226:1:exon

LOC110338999
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338999
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110338999
subclass of: SO_0000673
so part of: LOC110338999
location: 977793..978328
location: region:977793-978328:1
so has part: feature:977793-978328:1:exon

position:977793:1
position: 977793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978328:1
position: 978328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:977793-978328:1:exon

LOC110338999
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338999
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110338999
subclass of: SO_0000673
so part of: LOC110338999
location: 978498..978643
location: region:978498-978643:1
so has part: feature:978498-978643:1:exon

position:978498:1
position: 978498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978643:1
position: 978643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978498-978643:1:exon

LOC110338999
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338999
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110338999
subclass of: SO_0000673
so part of: LOC110338999
location: 1002876..1003655
location: region:1002876-1003655:1
so has part: feature:1002876-1003655:1:exon

position:1002876:1
position: 1002876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002876-1003655:1:exon

LOC110339000
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110339000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1116743..1121121
location: region:1116743-1121121:1
so has part: feature:1116743-1121121:1:exon

110339000
type: Gene
SIO_000068: ncbigene

position:1116743:1
position: 1116743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121121:1
position: 1121121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1116743-1121121:1:exon

LOC110339000
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339000
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110339000
subclass of: SO_0000673
so part of: LOC110339000
location: 1116743..1116880
location: region:1116743-1116880:1
so has part: feature:1116743-1116880:1:exon

position:1116880:1
position: 1116880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1116743-1116880:1:exon

LOC110339000
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339000
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110339000
subclass of: SO_0000673
so part of: LOC110339000
location: 1118461..1118583
location: region:1118461-1118583:1
so has part: feature:1118461-1118583:1:exon

position:1118461:1
position: 1118461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118583:1
position: 1118583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1118461-1118583:1:exon

LOC110339000
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339000
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110339000
subclass of: SO_0000673
so part of: LOC110339000
location: 1120682..1121121
location: region:1120682-1121121:1
so has part: feature:1120682-1121121:1:exon

position:1120682:1
position: 1120682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1120682-1121121:1:exon

Ly96
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Ly96
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1143402..1165647)
location: region:1143402-1165647:-1
so has part: feature:1143402-1165647:-1:exon
subclass of: SO_0000010

110338918
type: Gene
SIO_000068: ncbigene

position:1143402:-1
position: 1143402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165647:-1
position: 1165647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1143402-1165647:-1:exon

Ly96
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ly96
product: lymphocyte antigen 96, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021222389.2
SIO_010081: Ly96
subclass of: SO_0000673
so part of: Ly96
location: complement(join(1143402..1143578,1147087..1147139,1152221..1152349,1162131..1162220,1165374..1165645))
location: region:1143402-1165645:-1
so has part: feature:1165374-1165645:-1:exon
so has part: feature:1162131-1162220:-1:exon
so has part: feature:1152221-1152349:-1:exon
so has part: feature:1147087-1147139:-1:exon
so has part: feature:1143402-1143578:-1:exon

position:1165645:-1
position: 1165645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165374-1165645:-1:exon

position:1165374:-1
position: 1165374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1162131-1162220:-1:exon

position:1162131:-1
position: 1162131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162220:-1
position: 1162220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1152221-1152349:-1:exon

position:1152221:-1
position: 1152221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152349:-1
position: 1152349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1147087-1147139:-1:exon

position:1147087:-1
position: 1147087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1147139:-1
position: 1147139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1143402-1143578:-1:exon

position:1143578:-1
position: 1143578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ly96
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ly96
product: lymphocyte antigen 96, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021222390.2
SIO_010081: Ly96
subclass of: SO_0000673
so part of: Ly96
location: complement(join(1143408..1143578,1147087..1147139,1152221..1152295,1162131..1162220,1165374..1165647))
location: region:1143408-1165647:-1
so has part: feature:1165374-1165647:-1:exon
so has part: feature:1162131-1162220:-1:exon
so has part: feature:1152221-1152295:-1:exon
so has part: feature:1147087-1147139:-1:exon
so has part: feature:1143408-1143578:-1:exon

position:1143408:-1
position: 1143408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165374-1165647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1162131-1162220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1152221-1152295:-1:exon

position:1152295:-1
position: 1152295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1147087-1147139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1143408-1143578:-1:exon

Ly96
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ly96
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte antigen 96 isoform X2
translation: MLPFILFSTLLSPIFTESEKQQWICNSSDAIISYSYCDHLKFPISISSEPCIRLRGTNGFVHVEFIPKLPKRKEVMCHGHDDDYSFCRALKGETVNTSVPFSFEGILFPKGHYRCVAEAIAGDTEEKLFCLNFTIIHHRNVN
SIO_010081: Ly96
subclass of: SO_0000673
so part of: Ly96
location: complement(join(1143480..1143578,1147087..1147139,1152221..1152295,1162131..1162220,1165374..1165485))
location: region:1143480-1165485:-1
so has part: feature:1165374-1165485:-1:exon
so has part: feature:1162131-1162220:-1:exon
so has part: feature:1152221-1152295:-1:exon
so has part: feature:1147087-1147139:-1:exon
so has part: feature:1143480-1143578:-1:exon

XP_021078049.1
type: Protein
SIO_000068: ncbiprotein

position:1143480:-1
position: 1143480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165485:-1
position: 1165485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165374-1165485:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1162131-1162220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1152221-1152295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147087-1147139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1143480-1143578:-1:exon

Ly96
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ly96
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte antigen 96 isoform X1
translation: MLPFILFSTLLSPIFTESEKQQWICNSSDAIISYSYCDHLKFPISISSEPCIRLRGTNGFVHVEFIPRRNLKNLYFNLFINVNSIELPKRKEVMCHGHDDDYSFCRALKGETVNTSVPFSFEGILFPKGHYRCVAEAIAGDTEEKLFCLNFTIIHHRNVN
SIO_010081: Ly96
subclass of: SO_0000673
so part of: Ly96
location: complement(join(1143480..1143578,1147087..1147139,1152221..1152349,1162131..1162220,1165374..1165485))
location: region:1143480-1165485:-1
so has part: feature:1165374-1165485:-1:exon
so has part: feature:1162131-1162220:-1:exon
so has part: feature:1152221-1152349:-1:exon
so has part: feature:1147087-1147139:-1:exon
so has part: feature:1143480-1143578:-1:exon

XP_021078048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1165374-1165485:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1162131-1162220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1152221-1152349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147087-1147139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1143480-1143578:-1:exon

Tmem70
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Tmem70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1175344..1186269)
location: region:1175344-1186269:-1
so has part: feature:1175344-1186269:-1:exon
subclass of: SO_0000010

110338841
type: Gene
SIO_000068: ncbigene

position:1175344:-1
position: 1175344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1186269:-1
position: 1186269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1175344-1186269:-1:exon

Tmem70
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Tmem70
product: transmembrane protein 70, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021222303.2
SIO_010081: Tmem70
subclass of: SO_0000673
so part of: Tmem70
location: complement(join(1175344..1176242,1183149..1183257,1185982..1186269))
location: region:1175344-1186269:-1
so has part: feature:1185982-1186269:-1:exon
so has part: feature:1183149-1183257:-1:exon
so has part: feature:1175344-1176242:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1185982-1186269:-1:exon

position:1185982:-1
position: 1185982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1183149-1183257:-1:exon

position:1183149:-1
position: 1183149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1183257:-1
position: 1183257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1175344-1176242:-1:exon

position:1176242:-1
position: 1176242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tmem70
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Tmem70
product: transmembrane protein 70, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021222304.2
SIO_010081: Tmem70
subclass of: SO_0000673
so part of: Tmem70
location: complement(join(1175402..1176242,1183149..1183254,1185982..1186269))
location: region:1175402-1186269:-1
so has part: feature:1185982-1186269:-1:exon
so has part: feature:1183149-1183254:-1:exon
so has part: feature:1175402-1176242:-1:exon

position:1175402:-1
position: 1175402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1185982-1186269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1183149-1183254:-1:exon

position:1183254:-1
position: 1183254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1175402-1176242:-1:exon

Tmem70
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Tmem70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 70, mitochondrial isoform X2
translation: MLLALGGRWAAGLWPGRARTTWCVAAALRGSGIAFWRAASRAEPARLRSGGHPPPAESCGPPGRAQIPVCWGQRVRCLHTKVDQPEDGRLIYTGNLARTIFGVKCFSYSTSVVSLAFLPYLLSQSNMIFGSLPLQVLFYGVMGSFTVITPTLLHFLTKGYVIRLYHEATSDTYRAITYNVMLSETSTVFHQDDVTVPESAHIFTSFYAKTKSLLVNPALFLNPEDYNHLMGYDKPFTFDMEEVNEKKLHEGEK
SIO_010081: Tmem70
subclass of: SO_0000673
so part of: Tmem70
location: complement(join(1175785..1176242,1183149..1183254,1185982..1186179))
location: region:1175785-1186179:-1
so has part: feature:1185982-1186179:-1:exon
so has part: feature:1183149-1183254:-1:exon
so has part: feature:1175785-1176242:-1:exon

XP_021077963.1
type: Protein
SIO_000068: ncbiprotein

position:1175785:-1
position: 1175785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1186179:-1
position: 1186179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1185982-1186179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1183149-1183254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1175785-1176242:-1:exon

Tmem70
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Tmem70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 70, mitochondrial isoform X1
translation: MLLALGGRWAAGLWPGRARTTWCVAAALRGSGIAFWRAASRAEPARLRSGGHPPPAESCGPPGRAQQIPVCWGQRVRCLHTKVDQPEDGRLIYTGNLARTIFGVKCFSYSTSVVSLAFLPYLLSQSNMIFGSLPLQVLFYGVMGSFTVITPTLLHFLTKGYVIRLYHEATSDTYRAITYNVMLSETSTVFHQDDVTVPESAHIFTSFYAKTKSLLVNPALFLNPEDYNHLMGYDKPFTFDMEEVNEKKLHEGEK
SIO_010081: Tmem70
subclass of: SO_0000673
so part of: Tmem70
location: complement(join(1175785..1176242,1183149..1183257,1185982..1186179))
location: region:1175785-1186179:-1
so has part: feature:1185982-1186179:-1:exon
so has part: feature:1183149-1183257:-1:exon
so has part: feature:1175785-1176242:-1:exon

XP_021077962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1185982-1186179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1183149-1183257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1175785-1176242:-1:exon

LOC110339001
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110339001
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1186178..1188767
location: region:1186178-1188767:1
so has part: feature:1186178-1188767:1:exon

110339001
type: Gene
SIO_000068: ncbigene

position:1186178:1
position: 1186178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188767:1
position: 1188767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1186178-1188767:1:exon

LOC110339001
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339001
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110339001
subclass of: SO_0000673
so part of: LOC110339001
location: 1186178..1186360
location: region:1186178-1186360:1
so has part: feature:1186178-1186360:1:exon

position:1186360:1
position: 1186360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1186178-1186360:1:exon

LOC110339001
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339001
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110339001
subclass of: SO_0000673
so part of: LOC110339001
location: 1187817..1187934
location: region:1187817-1187934:1
so has part: feature:1187817-1187934:1:exon

position:1187817:1
position: 1187817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187934:1
position: 1187934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1187817-1187934:1:exon

LOC110339001
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339001
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110339001
subclass of: SO_0000673
so part of: LOC110339001
location: 1188135..1188767
location: region:1188135-1188767:1
so has part: feature:1188135-1188767:1:exon

position:1188135:1
position: 1188135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1188135-1188767:1:exon

Eloc
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Eloc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1203392..1221490
location: region:1203392-1221490:1
so has part: feature:1203392-1221490:1:exon
subclass of: SO_0000010

110339002
type: Gene
SIO_000068: ncbigene

position:1203392:1
position: 1203392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221490:1
position: 1221490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203392-1221490:1:exon

Eloc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Eloc
product: elongin C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029533448.1
SIO_010081: Eloc
subclass of: SO_0000673
so part of: Eloc
location: join(1203392..1203738,1204006..1204058,1208578..1208721,1211002..1211030,1221356..1221490)
location: region:1203392-1221490:1
so has part: feature:1203392-1203738:1:exon
so has part: feature:1204006-1204058:1:exon
so has part: feature:1208578-1208721:1:exon
so has part: feature:1211002-1211030:1:exon
so has part: feature:1221356-1221490:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1203392-1203738:1:exon

position:1203738:1
position: 1203738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1204006-1204058:1:exon

position:1204006:1
position: 1204006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1204058:1
position: 1204058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1208578-1208721:1:exon

position:1208578:1
position: 1208578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1208721:1
position: 1208721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1211002-1211030:1:exon

position:1211002:1
position: 1211002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1211030:1
position: 1211030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1221356-1221490:1:exon

position:1221356:1
position: 1221356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Eloc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Eloc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongin-C
translation: MQELSCRPKSPYKLRIWKILKFLWAQIEFYKNTMDGEEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNETGPSRRLPASATSSRLDLHGDCSAILRPGDPAALDLLDRPLHLL
SIO_010081: Eloc
subclass of: SO_0000673
so part of: Eloc
location: join(1203689..1203738,1204006..1204058,1208578..1208721,1211002..1211030,1221356..1221490)
location: region:1203689-1221490:1
so has part: feature:1203689-1203738:1:exon
so has part: feature:1204006-1204058:1:exon
so has part: feature:1208578-1208721:1:exon
so has part: feature:1211002-1211030:1:exon
so has part: feature:1221356-1221490:1:exon

XP_029389308.1
type: Protein
SIO_000068: ncbiprotein

position:1203689:1
position: 1203689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203689-1203738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1204006-1204058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1208578-1208721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1211002-1211030:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1221356-1221490:1:exon

Ube2w
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Ube2w
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1231934..1289740
location: region:1231934-1289740:1
so has part: feature:1231934-1289740:1:exon
subclass of: SO_0000010

110338770
type: Gene
SIO_000068: ncbigene

position:1231934:1
position: 1231934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1289740:1
position: 1289740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1231934-1289740:1:exon

Ube2w
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ube2w
product: ubiquitin conjugating enzyme E2 W, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021222203.2
SIO_010081: Ube2w
subclass of: SO_0000673
so part of: Ube2w
location: join(1231934..1232029,1255982..1256073,1260680..1260782,1273300..1273455,1276718..1276793,1288404..1289554)
location: region:1231934-1289554:1
so has part: feature:1231934-1232029:1:exon
so has part: feature:1255982-1256073:1:exon
so has part: feature:1260680-1260782:1:exon
so has part: feature:1273300-1273455:1:exon
so has part: feature:1276718-1276793:1:exon
so has part: feature:1288404-1289554:1:exon

position:1289554:1
position: 1289554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1231934-1232029:1:exon

position:1232029:1
position: 1232029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1255982-1256073:1:exon

position:1255982:1
position: 1255982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1256073:1
position: 1256073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1260680-1260782:1:exon

position:1260680:1
position: 1260680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260782:1
position: 1260782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1273300-1273455:1:exon

position:1273300:1
position: 1273300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273455:1
position: 1273455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1276718-1276793:1:exon

position:1276718:1
position: 1276718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276793:1
position: 1276793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1288404-1289554:1:exon

position:1288404:1
position: 1288404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ube2w
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ube2w
product: ubiquitin conjugating enzyme E2 W, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029533337.1
SIO_010081: Ube2w
subclass of: SO_0000673
so part of: Ube2w
location: join(1231985..1232029,1255982..1256073,1260680..1260782,1273379..1273455,1276718..1276793,1288404..1289740)
location: region:1231985-1289740:1
so has part: feature:1231985-1232029:1:exon
so has part: feature:1255982-1256073:1:exon
so has part: feature:1260680-1260782:1:exon
so has part: feature:1273379-1273455:1:exon
so has part: feature:1276718-1276793:1:exon
so has part: feature:1288404-1289740:1:exon

position:1231985:1
position: 1231985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1231985-1232029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1255982-1256073:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1260680-1260782:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1273379-1273455:1:exon

position:1273379:1
position: 1273379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1276718-1276793:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288404-1289740:1:exon

Ube2w
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ube2w
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 W isoform X2
translation: MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQKTGPRRSQCSQSVSALSACFPAAKKRDDHQIIPFMCEHVTRIQRKQNGGIMMTLVDAAALLL
SIO_010081: Ube2w
subclass of: SO_0000673
so part of: Ube2w
location: join(1232015..1232029,1255982..1256073,1260680..1260782,1273379..1273455,1276718..1276793,1288404..1288439)
location: region:1232015-1288439:1
so has part: feature:1232015-1232029:1:exon
so has part: feature:1255982-1256073:1:exon
so has part: feature:1260680-1260782:1:exon
so has part: feature:1273379-1273455:1:exon
so has part: feature:1276718-1276793:1:exon
so has part: feature:1288404-1288439:1:exon

XP_029389197.1
type: Protein
SIO_000068: ncbiprotein

position:1232015:1
position: 1232015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288439:1
position: 1288439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1232015-1232029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1255982-1256073:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1260680-1260782:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1273379-1273455:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276718-1276793:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288404-1288439:1:exon

Ube2w
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ube2w
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 W isoform X1
translation: MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPIHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC
SIO_010081: Ube2w
subclass of: SO_0000673
so part of: Ube2w
location: join(1232015..1232029,1255982..1256073,1260680..1260782,1273300..1273455,1276718..1276793,1288404..1288417)
location: region:1232015-1288417:1
so has part: feature:1232015-1232029:1:exon
so has part: feature:1255982-1256073:1:exon
so has part: feature:1260680-1260782:1:exon
so has part: feature:1273300-1273455:1:exon
so has part: feature:1276718-1276793:1:exon
so has part: feature:1288404-1288417:1:exon

XP_021077862.2
type: Protein
SIO_000068: ncbiprotein

position:1288417:1
position: 1288417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1232015-1232029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1255982-1256073:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1260680-1260782:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1273300-1273455:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276718-1276793:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288404-1288417:1:exon

Stau2
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Stau2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1341851..1641074
location: region:1341851-1641074:1
so has part: feature:1341851-1641074:1:exon
subclass of: SO_0000010

110338681
type: Gene
SIO_000068: ncbigene

position:1341851:1
position: 1341851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1641074:1
position: 1641074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341851-1641074:1:exon

Stau2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Stau2
product: staufen double-stranded RNA binding protein 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533246.1
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(1341851..1341870,1352311..1352378,1408082..1408241,1419140..1419275,1465336..1465495,1466925..1467032,1469698..1469910,1479120..1479257,1487146..1487277,1490141..1490201,1515102..1515409,1638388..1638476,1640013..1641074)
location: region:1341851-1641074:1
so has part: feature:1341851-1341870:1:exon
so has part: feature:1352311-1352378:1:exon
so has part: feature:1408082-1408241:1:exon
so has part: feature:1419140-1419275:1:exon
so has part: feature:1465336-1465495:1:exon
so has part: feature:1466925-1467032:1:exon
so has part: feature:1469698-1469910:1:exon
so has part: feature:1479120-1479257:1:exon
so has part: feature:1487146-1487277:1:exon
so has part: feature:1490141-1490201:1:exon
so has part: feature:1515102-1515409:1:exon
so has part: feature:1638388-1638476:1:exon
so has part: feature:1640013-1641074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1341851-1341870:1:exon

position:1341870:1
position: 1341870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1352311-1352378:1:exon

position:1352311:1
position: 1352311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352378:1
position: 1352378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1408082-1408241:1:exon

position:1408082:1
position: 1408082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1408241:1
position: 1408241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1419140-1419275:1:exon

position:1419140:1
position: 1419140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419275:1
position: 1419275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1465336-1465495:1:exon

position:1465336:1
position: 1465336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1465495:1
position: 1465495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1466925-1467032:1:exon

position:1466925:1
position: 1466925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1467032:1
position: 1467032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1469698-1469910:1:exon

position:1469698:1
position: 1469698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469910:1
position: 1469910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1479120-1479257:1:exon

position:1479120:1
position: 1479120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1479257:1
position: 1479257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1487146-1487277:1:exon

position:1487146:1
position: 1487146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1487277:1
position: 1487277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1490141-1490201:1:exon

position:1490141:1
position: 1490141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1490201:1
position: 1490201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1515102-1515409:1:exon

position:1515102:1
position: 1515102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515409:1
position: 1515409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1638388-1638476:1:exon

position:1638388:1
position: 1638388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1638476:1
position: 1638476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1640013-1641074:1:exon

position:1640013:1
position: 1640013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Stau2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Stau2
product: staufen double-stranded RNA binding protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021222069.2
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(1342319..1342410,1352311..1352378,1408082..1408241,1419140..1419275,1465336..1465495,1466925..1467032,1469698..1469910,1479120..1479257,1487146..1487277,1490141..1490201,1515102..1515409,1638388..1638476,1640013..1641074)
location: region:1342319-1641074:1
so has part: feature:1342319-1342410:1:exon
so has part: feature:1352311-1352378:1:exon
so has part: feature:1408082-1408241:1:exon
so has part: feature:1419140-1419275:1:exon
so has part: feature:1465336-1465495:1:exon
so has part: feature:1466925-1467032:1:exon
so has part: feature:1469698-1469910:1:exon
so has part: feature:1479120-1479257:1:exon
so has part: feature:1487146-1487277:1:exon
so has part: feature:1490141-1490201:1:exon
so has part: feature:1515102-1515409:1:exon
so has part: feature:1638388-1638476:1:exon
so has part: feature:1640013-1641074:1:exon

position:1342319:1
position: 1342319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1342319-1342410:1:exon

position:1342410:1
position: 1342410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1352311-1352378:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1408082-1408241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1419140-1419275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1465336-1465495:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1466925-1467032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1469698-1469910:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1479120-1479257:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1487146-1487277:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1490141-1490201:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1515102-1515409:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1638388-1638476:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1640013-1641074:1:exon

Stau2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Stau2
product: staufen double-stranded RNA binding protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533243.1
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(1342330..1342410,1344674..1344727,1352311..1352378,1408082..1408241,1419140..1419275,1465336..1465495,1466925..1467032,1469698..1469910,1479120..1479257,1487146..1487277,1490141..1490201,1515102..1515409,1638388..1638476,1640013..1641074)
location: region:1342330-1641074:1
so has part: feature:1342330-1342410:1:exon
so has part: feature:1344674-1344727:1:exon
so has part: feature:1352311-1352378:1:exon
so has part: feature:1408082-1408241:1:exon
so has part: feature:1419140-1419275:1:exon
so has part: feature:1465336-1465495:1:exon
so has part: feature:1466925-1467032:1:exon
so has part: feature:1469698-1469910:1:exon
so has part: feature:1479120-1479257:1:exon
so has part: feature:1487146-1487277:1:exon
so has part: feature:1490141-1490201:1:exon
so has part: feature:1515102-1515409:1:exon
so has part: feature:1638388-1638476:1:exon
so has part: feature:1640013-1641074:1:exon

position:1342330:1
position: 1342330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1342330-1342410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1344674-1344727:1:exon

position:1344674:1
position: 1344674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1344727:1
position: 1344727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1352311-1352378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1408082-1408241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1419140-1419275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1465336-1465495:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1466925-1467032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1469698-1469910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1479120-1479257:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1487146-1487277:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1490141-1490201:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1515102-1515409:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1638388-1638476:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1640013-1641074:1:exon

Stau2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Stau2
product: staufen double-stranded RNA binding protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021222067.2
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(1342398..1342410,1352311..1352378,1384107..1384237,1408082..1408241,1419140..1419275,1465336..1465495,1466925..1467032,1469698..1469910,1479120..1479257,1487146..1487277,1490141..1490201,1515102..1515409,1638388..1638476,1640013..1640739)
location: region:1342398-1640739:1
so has part: feature:1342398-1342410:1:exon
so has part: feature:1352311-1352378:1:exon
so has part: feature:1384107-1384237:1:exon
so has part: feature:1408082-1408241:1:exon
so has part: feature:1419140-1419275:1:exon
so has part: feature:1465336-1465495:1:exon
so has part: feature:1466925-1467032:1:exon
so has part: feature:1469698-1469910:1:exon
so has part: feature:1479120-1479257:1:exon
so has part: feature:1487146-1487277:1:exon
so has part: feature:1490141-1490201:1:exon
so has part: feature:1515102-1515409:1:exon
so has part: feature:1638388-1638476:1:exon
so has part: feature:1640013-1640739:1:exon

position:1342398:1
position: 1342398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640739:1
position: 1640739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1342398-1342410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1352311-1352378:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1384107-1384237:1:exon

position:1384107:1
position: 1384107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384237:1
position: 1384237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1408082-1408241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1419140-1419275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1465336-1465495:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1466925-1467032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1469698-1469910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1479120-1479257:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1487146-1487277:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1490141-1490201:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1515102-1515409:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1638388-1638476:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1640013-1640739:1:exon

Stau2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Stau2
product: staufen double-stranded RNA binding protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029533244.1
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(1342747..1342844,1352311..1352378,1408082..1408241,1419140..1419275,1465336..1465495,1466925..1467032,1469698..1469910,1479120..1479257,1487146..1487277,1490141..1490201,1515102..1515409,1638388..1638476,1640013..1641074)
location: region:1342747-1641074:1
so has part: feature:1342747-1342844:1:exon
so has part: feature:1352311-1352378:1:exon
so has part: feature:1408082-1408241:1:exon
so has part: feature:1419140-1419275:1:exon
so has part: feature:1465336-1465495:1:exon
so has part: feature:1466925-1467032:1:exon
so has part: feature:1469698-1469910:1:exon
so has part: feature:1479120-1479257:1:exon
so has part: feature:1487146-1487277:1:exon
so has part: feature:1490141-1490201:1:exon
so has part: feature:1515102-1515409:1:exon
so has part: feature:1638388-1638476:1:exon
so has part: feature:1640013-1641074:1:exon

position:1342747:1
position: 1342747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1342747-1342844:1:exon

position:1342844:1
position: 1342844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1352311-1352378:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1408082-1408241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1419140-1419275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1465336-1465495:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1466925-1467032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1469698-1469910:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1479120-1479257:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1487146-1487277:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1490141-1490201:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1515102-1515409:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1638388-1638476:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1640013-1641074:1:exon

Stau2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Stau2
product: staufen double-stranded RNA binding protein 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029533245.1
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(1342850..1342907,1352311..1352378,1408082..1408241,1419140..1419275,1465336..1465495,1466925..1467032,1469698..1469910,1479120..1479257,1487146..1487277,1490141..1490201,1515102..1515409,1638388..1638476,1640013..1641074)
location: region:1342850-1641074:1
so has part: feature:1342850-1342907:1:exon
so has part: feature:1352311-1352378:1:exon
so has part: feature:1408082-1408241:1:exon
so has part: feature:1419140-1419275:1:exon
so has part: feature:1465336-1465495:1:exon
so has part: feature:1466925-1467032:1:exon
so has part: feature:1469698-1469910:1:exon
so has part: feature:1479120-1479257:1:exon
so has part: feature:1487146-1487277:1:exon
so has part: feature:1490141-1490201:1:exon
so has part: feature:1515102-1515409:1:exon
so has part: feature:1638388-1638476:1:exon
so has part: feature:1640013-1641074:1:exon

position:1342850:1
position: 1342850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1342850-1342907:1:exon

position:1342907:1
position: 1342907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1352311-1352378:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1408082-1408241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1419140-1419275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1465336-1465495:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1466925-1467032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1469698-1469910:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1479120-1479257:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1487146-1487277:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1490141-1490201:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1515102-1515409:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1638388-1638476:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1640013-1641074:1:exon

Stau2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Stau2
product: staufen double-stranded RNA binding protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533241.1
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(1344709..1344727,1352311..1352378,1355368..1355580,1384107..1384237,1408082..1408241,1419140..1419275,1465336..1465495,1466925..1467032,1469698..1469910,1479120..1479257,1487146..1487277,1490141..1490201,1515102..1515409,1638388..1638476,1640013..1640739)
location: region:1344709-1640739:1
so has part: feature:1344709-1344727:1:exon
so has part: feature:1352311-1352378:1:exon
so has part: feature:1355368-1355580:1:exon
so has part: feature:1384107-1384237:1:exon
so has part: feature:1408082-1408241:1:exon
so has part: feature:1419140-1419275:1:exon
so has part: feature:1465336-1465495:1:exon
so has part: feature:1466925-1467032:1:exon
so has part: feature:1469698-1469910:1:exon
so has part: feature:1479120-1479257:1:exon
so has part: feature:1487146-1487277:1:exon
so has part: feature:1490141-1490201:1:exon
so has part: feature:1515102-1515409:1:exon
so has part: feature:1638388-1638476:1:exon
so has part: feature:1640013-1640739:1:exon

position:1344709:1
position: 1344709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344709-1344727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1352311-1352378:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1355368-1355580:1:exon

position:1355368:1
position: 1355368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1355580:1
position: 1355580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1384107-1384237:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1408082-1408241:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1419140-1419275:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1465336-1465495:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1466925-1467032:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1469698-1469910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1479120-1479257:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1487146-1487277:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1490141-1490201:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1515102-1515409:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1638388-1638476:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1640013-1640739:1:exon

Stau2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Stau2
product: staufen double-stranded RNA binding protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533242.1
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(1344709..1344727,1352311..1352378,1355368..1355580,1408082..1408241,1419140..1419275,1465336..1465495,1466925..1467032,1469698..1469910,1479120..1479257,1487146..1487277,1490141..1490201,1515102..1515409,1638388..1638476,1640013..1640739)
location: region:1344709-1640739:1
so has part: feature:1344709-1344727:1:exon
so has part: feature:1352311-1352378:1:exon
so has part: feature:1355368-1355580:1:exon
so has part: feature:1408082-1408241:1:exon
so has part: feature:1419140-1419275:1:exon
so has part: feature:1465336-1465495:1:exon
so has part: feature:1466925-1467032:1:exon
so has part: feature:1469698-1469910:1:exon
so has part: feature:1479120-1479257:1:exon
so has part: feature:1487146-1487277:1:exon
so has part: feature:1490141-1490201:1:exon
so has part: feature:1515102-1515409:1:exon
so has part: feature:1638388-1638476:1:exon
so has part: feature:1640013-1640739:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1344709-1344727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1352311-1352378:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1355368-1355580:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1408082-1408241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1419140-1419275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1465336-1465495:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1466925-1467032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1469698-1469910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1479120-1479257:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1487146-1487277:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1490141-1490201:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1515102-1515409:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1638388-1638476:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1640013-1640739:1:exon

Stau2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Stau2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-binding protein Staufen homolog 2 isoform X3
translation: MLQINQMFSVQLSLGEQTWESEGSSIKKAQQAVANKALTESTLPKPVQKPPKSNVNSNPGSITPTVELNGLAMKRGEPAIYRPLDPKPVPNYRANYNFRGMYNQRYHCPMPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQNEPIPERSPQNGESGKEMDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPDYGQGMNPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTSLQDPLDKTGENKGWSGPKPGFPEPTNNTPKGILHLSPDVYQEMEASRHRVTSGTSLSYLSPKDMNQPSSSFFSVSPSSTSSATVARELLMNGTSPTAEAIGLKGSSPTSPCSSVQPSKQLEYLARIQGFQAALSALKQFSEQGLESVDGAVNVEKGSLEKQAEHLREKADSNQAKPASISQDCEKSKSAI
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(1352361..1352378,1408082..1408241,1419140..1419275,1465336..1465495,1466925..1467032,1469698..1469910,1479120..1479257,1487146..1487277,1490141..1490201,1515102..1515409,1638388..1638476,1640013..1640106)
location: region:1352361-1640106:1
so has part: feature:1352361-1352378:1:exon
so has part: feature:1408082-1408241:1:exon
so has part: feature:1419140-1419275:1:exon
so has part: feature:1465336-1465495:1:exon
so has part: feature:1466925-1467032:1:exon
so has part: feature:1469698-1469910:1:exon
so has part: feature:1479120-1479257:1:exon
so has part: feature:1487146-1487277:1:exon
so has part: feature:1490141-1490201:1:exon
so has part: feature:1515102-1515409:1:exon
so has part: feature:1638388-1638476:1:exon
so has part: feature:1640013-1640106:1:exon

XP_021077728.1
type: Protein
SIO_000068: ncbiprotein

position:1352361:1
position: 1352361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640106:1
position: 1640106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1352361-1352378:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1408082-1408241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419140-1419275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1465336-1465495:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466925-1467032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469698-1469910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1479120-1479257:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1487146-1487277:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1490141-1490201:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1515102-1515409:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1638388-1638476:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1640013-1640106:1:exon

Stau2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Stau2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-binding protein Staufen homolog 2 isoform X3
translation: MLQINQMFSVQLSLGEQTWESEGSSIKKAQQAVANKALTESTLPKPVQKPPKSNVNSNPGSITPTVELNGLAMKRGEPAIYRPLDPKPVPNYRANYNFRGMYNQRYHCPMPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQNEPIPERSPQNGESGKEMDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPDYGQGMNPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTSLQDPLDKTGENKGWSGPKPGFPEPTNNTPKGILHLSPDVYQEMEASRHRVTSGTSLSYLSPKDMNQPSSSFFSVSPSSTSSATVARELLMNGTSPTAEAIGLKGSSPTSPCSSVQPSKQLEYLARIQGFQAALSALKQFSEQGLESVDGAVNVEKGSLEKQAEHLREKADSNQAKPASISQDCEKSKSAI
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(1352361..1352378,1408082..1408241,1419140..1419275,1465336..1465495,1466925..1467032,1469698..1469910,1479120..1479257,1487146..1487277,1490141..1490201,1515102..1515409,1638388..1638476,1640013..1640106)
location: region:1352361-1640106:1
so has part: feature:1352361-1352378:1:exon
so has part: feature:1408082-1408241:1:exon
so has part: feature:1419140-1419275:1:exon
so has part: feature:1465336-1465495:1:exon
so has part: feature:1466925-1467032:1:exon
so has part: feature:1469698-1469910:1:exon
so has part: feature:1479120-1479257:1:exon
so has part: feature:1487146-1487277:1:exon
so has part: feature:1490141-1490201:1:exon
so has part: feature:1515102-1515409:1:exon
so has part: feature:1638388-1638476:1:exon
so has part: feature:1640013-1640106:1:exon

XP_029389103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1352361-1352378:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1408082-1408241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419140-1419275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1465336-1465495:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466925-1467032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469698-1469910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1479120-1479257:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1487146-1487277:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1490141-1490201:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1515102-1515409:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1638388-1638476:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1640013-1640106:1:exon

Stau2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Stau2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-binding protein Staufen homolog 2 isoform X3
translation: MLQINQMFSVQLSLGEQTWESEGSSIKKAQQAVANKALTESTLPKPVQKPPKSNVNSNPGSITPTVELNGLAMKRGEPAIYRPLDPKPVPNYRANYNFRGMYNQRYHCPMPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQNEPIPERSPQNGESGKEMDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPDYGQGMNPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTSLQDPLDKTGENKGWSGPKPGFPEPTNNTPKGILHLSPDVYQEMEASRHRVTSGTSLSYLSPKDMNQPSSSFFSVSPSSTSSATVARELLMNGTSPTAEAIGLKGSSPTSPCSSVQPSKQLEYLARIQGFQAALSALKQFSEQGLESVDGAVNVEKGSLEKQAEHLREKADSNQAKPASISQDCEKSKSAI
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(1352361..1352378,1408082..1408241,1419140..1419275,1465336..1465495,1466925..1467032,1469698..1469910,1479120..1479257,1487146..1487277,1490141..1490201,1515102..1515409,1638388..1638476,1640013..1640106)
location: region:1352361-1640106:1
so has part: feature:1352361-1352378:1:exon
so has part: feature:1408082-1408241:1:exon
so has part: feature:1419140-1419275:1:exon
so has part: feature:1465336-1465495:1:exon
so has part: feature:1466925-1467032:1:exon
so has part: feature:1469698-1469910:1:exon
so has part: feature:1479120-1479257:1:exon
so has part: feature:1487146-1487277:1:exon
so has part: feature:1490141-1490201:1:exon
so has part: feature:1515102-1515409:1:exon
so has part: feature:1638388-1638476:1:exon
so has part: feature:1640013-1640106:1:exon

XP_029389104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1352361-1352378:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1408082-1408241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419140-1419275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1465336-1465495:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466925-1467032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469698-1469910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1479120-1479257:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1487146-1487277:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1490141-1490201:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1515102-1515409:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1638388-1638476:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1640013-1640106:1:exon

Stau2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Stau2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-binding protein Staufen homolog 2 isoform X3
translation: MLQINQMFSVQLSLGEQTWESEGSSIKKAQQAVANKALTESTLPKPVQKPPKSNVNSNPGSITPTVELNGLAMKRGEPAIYRPLDPKPVPNYRANYNFRGMYNQRYHCPMPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQNEPIPERSPQNGESGKEMDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPDYGQGMNPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTSLQDPLDKTGENKGWSGPKPGFPEPTNNTPKGILHLSPDVYQEMEASRHRVTSGTSLSYLSPKDMNQPSSSFFSVSPSSTSSATVARELLMNGTSPTAEAIGLKGSSPTSPCSSVQPSKQLEYLARIQGFQAALSALKQFSEQGLESVDGAVNVEKGSLEKQAEHLREKADSNQAKPASISQDCEKSKSAI
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(1352361..1352378,1408082..1408241,1419140..1419275,1465336..1465495,1466925..1467032,1469698..1469910,1479120..1479257,1487146..1487277,1490141..1490201,1515102..1515409,1638388..1638476,1640013..1640106)
location: region:1352361-1640106:1
so has part: feature:1352361-1352378:1:exon
so has part: feature:1408082-1408241:1:exon
so has part: feature:1419140-1419275:1:exon
so has part: feature:1465336-1465495:1:exon
so has part: feature:1466925-1467032:1:exon
so has part: feature:1469698-1469910:1:exon
so has part: feature:1479120-1479257:1:exon
so has part: feature:1487146-1487277:1:exon
so has part: feature:1490141-1490201:1:exon
so has part: feature:1515102-1515409:1:exon
so has part: feature:1638388-1638476:1:exon
so has part: feature:1640013-1640106:1:exon

XP_029389105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1352361-1352378:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1408082-1408241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419140-1419275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1465336-1465495:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466925-1467032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469698-1469910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1479120-1479257:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1487146-1487277:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1490141-1490201:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1515102-1515409:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1638388-1638476:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1640013-1640106:1:exon

Stau2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Stau2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-binding protein Staufen homolog 2 isoform X3
translation: MLQINQMFSVQLSLGEQTWESEGSSIKKAQQAVANKALTESTLPKPVQKPPKSNVNSNPGSITPTVELNGLAMKRGEPAIYRPLDPKPVPNYRANYNFRGMYNQRYHCPMPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQNEPIPERSPQNGESGKEMDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPDYGQGMNPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTSLQDPLDKTGENKGWSGPKPGFPEPTNNTPKGILHLSPDVYQEMEASRHRVTSGTSLSYLSPKDMNQPSSSFFSVSPSSTSSATVARELLMNGTSPTAEAIGLKGSSPTSPCSSVQPSKQLEYLARIQGFQAALSALKQFSEQGLESVDGAVNVEKGSLEKQAEHLREKADSNQAKPASISQDCEKSKSAI
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(1352361..1352378,1408082..1408241,1419140..1419275,1465336..1465495,1466925..1467032,1469698..1469910,1479120..1479257,1487146..1487277,1490141..1490201,1515102..1515409,1638388..1638476,1640013..1640106)
location: region:1352361-1640106:1
so has part: feature:1352361-1352378:1:exon
so has part: feature:1408082-1408241:1:exon
so has part: feature:1419140-1419275:1:exon
so has part: feature:1465336-1465495:1:exon
so has part: feature:1466925-1467032:1:exon
so has part: feature:1469698-1469910:1:exon
so has part: feature:1479120-1479257:1:exon
so has part: feature:1487146-1487277:1:exon
so has part: feature:1490141-1490201:1:exon
so has part: feature:1515102-1515409:1:exon
so has part: feature:1638388-1638476:1:exon
so has part: feature:1640013-1640106:1:exon

XP_029389106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1352361-1352378:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1408082-1408241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419140-1419275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1465336-1465495:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466925-1467032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469698-1469910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1479120-1479257:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1487146-1487277:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1490141-1490201:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1515102-1515409:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1638388-1638476:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1640013-1640106:1:exon

Stau2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Stau2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-binding protein Staufen homolog 2 isoform X2
translation: MKSVLFSGLSLLKMFSVQLSLGEQTWESEGSSIKKAQQAVANKALTESTLPKPVQKPPKSNVNSNPGSITPTVELNGLAMKRGEPAIYRPLDPKPVPNYRANYNFRGMYNQRYHCPMPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQNEPIPERSPQNGESGKEMDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPDYGQGMNPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTSLQDPLDKTGENKGWSGPKPGFPEPTNNTPKGILHLSPDVYQEMEASRHRVTSGTSLSYLSPKDMNQPSSSFFSVSPSSTSSATVARELLMNGTSPTAEAIGLKGSSPTSPCSSVQPSKQLEYLARIQGFQAALSALKQFSEQGLESVDGAVNVEKGSLEKQAEHLREKADSNQAKPASISQDCEKSKSAI
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(1355542..1355580,1408082..1408241,1419140..1419275,1465336..1465495,1466925..1467032,1469698..1469910,1479120..1479257,1487146..1487277,1490141..1490201,1515102..1515409,1638388..1638476,1640013..1640106)
location: region:1355542-1640106:1
so has part: feature:1355542-1355580:1:exon
so has part: feature:1408082-1408241:1:exon
so has part: feature:1419140-1419275:1:exon
so has part: feature:1465336-1465495:1:exon
so has part: feature:1466925-1467032:1:exon
so has part: feature:1469698-1469910:1:exon
so has part: feature:1479120-1479257:1:exon
so has part: feature:1487146-1487277:1:exon
so has part: feature:1490141-1490201:1:exon
so has part: feature:1515102-1515409:1:exon
so has part: feature:1638388-1638476:1:exon
so has part: feature:1640013-1640106:1:exon

XP_029389102.1
type: Protein
SIO_000068: ncbiprotein

position:1355542:1
position: 1355542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1355542-1355580:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1408082-1408241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419140-1419275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1465336-1465495:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466925-1467032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469698-1469910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1479120-1479257:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1487146-1487277:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1490141-1490201:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1515102-1515409:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1638388-1638476:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1640013-1640106:1:exon

Stau2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Stau2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-binding protein Staufen homolog 2 isoform X1
translation: MANPKEKTPVCLVNELARFHSIQPQYKLLNESGPAHSKMFSVQLSLGEQTWESEGSSIKKAQQAVANKALTESTLPKPVQKPPKSNVNSNPGSITPTVELNGLAMKRGEPAIYRPLDPKPVPNYRANYNFRGMYNQRYHCPMPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQNEPIPERSPQNGESGKEMDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPDYGQGMNPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTSLQDPLDKTGENKGWSGPKPGFPEPTNNTPKGILHLSPDVYQEMEASRHRVTSGTSLSYLSPKDMNQPSSSFFSVSPSSTSSATVARELLMNGTSPTAEAIGLKGSSPTSPCSSVQPSKQLEYLARIQGFQAALSALKQFSEQGLESVDGAVNVEKGSLEKQAEHLREKADSNQAKPASISQDCEKSKSAI
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(1384124..1384237,1408082..1408241,1419140..1419275,1465336..1465495,1466925..1467032,1469698..1469910,1479120..1479257,1487146..1487277,1490141..1490201,1515102..1515409,1638388..1638476,1640013..1640106)
location: region:1384124-1640106:1
so has part: feature:1384124-1384237:1:exon
so has part: feature:1408082-1408241:1:exon
so has part: feature:1419140-1419275:1:exon
so has part: feature:1465336-1465495:1:exon
so has part: feature:1466925-1467032:1:exon
so has part: feature:1469698-1469910:1:exon
so has part: feature:1479120-1479257:1:exon
so has part: feature:1487146-1487277:1:exon
so has part: feature:1490141-1490201:1:exon
so has part: feature:1515102-1515409:1:exon
so has part: feature:1638388-1638476:1:exon
so has part: feature:1640013-1640106:1:exon

XP_021077726.1
type: Protein
SIO_000068: ncbiprotein

position:1384124:1
position: 1384124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1384124-1384237:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1408082-1408241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419140-1419275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1465336-1465495:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466925-1467032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469698-1469910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1479120-1479257:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1487146-1487277:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1490141-1490201:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1515102-1515409:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1638388-1638476:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1640013-1640106:1:exon

Stau2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Stau2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-binding protein Staufen homolog 2 isoform X1
translation: MANPKEKTPVCLVNELARFHSIQPQYKLLNESGPAHSKMFSVQLSLGEQTWESEGSSIKKAQQAVANKALTESTLPKPVQKPPKSNVNSNPGSITPTVELNGLAMKRGEPAIYRPLDPKPVPNYRANYNFRGMYNQRYHCPMPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQNEPIPERSPQNGESGKEMDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPDYGQGMNPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTSLQDPLDKTGENKGWSGPKPGFPEPTNNTPKGILHLSPDVYQEMEASRHRVTSGTSLSYLSPKDMNQPSSSFFSVSPSSTSSATVARELLMNGTSPTAEAIGLKGSSPTSPCSSVQPSKQLEYLARIQGFQAALSALKQFSEQGLESVDGAVNVEKGSLEKQAEHLREKADSNQAKPASISQDCEKSKSAI
SIO_010081: Stau2
subclass of: SO_0000673
so part of: Stau2
location: join(1384124..1384237,1408082..1408241,1419140..1419275,1465336..1465495,1466925..1467032,1469698..1469910,1479120..1479257,1487146..1487277,1490141..1490201,1515102..1515409,1638388..1638476,1640013..1640106)
location: region:1384124-1640106:1
so has part: feature:1384124-1384237:1:exon
so has part: feature:1408082-1408241:1:exon
so has part: feature:1419140-1419275:1:exon
so has part: feature:1465336-1465495:1:exon
so has part: feature:1466925-1467032:1:exon
so has part: feature:1469698-1469910:1:exon
so has part: feature:1479120-1479257:1:exon
so has part: feature:1487146-1487277:1:exon
so has part: feature:1490141-1490201:1:exon
so has part: feature:1515102-1515409:1:exon
so has part: feature:1638388-1638476:1:exon
so has part: feature:1640013-1640106:1:exon

XP_029389101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1384124-1384237:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1408082-1408241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419140-1419275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1465336-1465495:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466925-1467032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469698-1469910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1479120-1479257:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1487146-1487277:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1490141-1490201:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1515102-1515409:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1638388-1638476:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1640013-1640106:1:exon

Rdh10
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Rdh10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1731737..1758948)
location: region:1731737-1758948:-1
so has part: feature:1731737-1758948:-1:exon
subclass of: SO_0000010

110338709
type: Gene
SIO_000068: ncbigene

position:1731737:-1
position: 1731737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1758948:-1
position: 1758948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1731737-1758948:-1:exon

Rdh10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Rdh10
product: retinol dehydrogenase 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021222118.2
SIO_010081: Rdh10
subclass of: SO_0000673
so part of: Rdh10
location: complement(join(1731737..1733022,1733105..1733236,1734983..1735128,1736053..1736151,1756311..1756546,1757968..1758948))
location: region:1731737-1758948:-1
so has part: feature:1757968-1758948:-1:exon
so has part: feature:1756311-1756546:-1:exon
so has part: feature:1736053-1736151:-1:exon
so has part: feature:1734983-1735128:-1:exon
so has part: feature:1733105-1733236:-1:exon
so has part: feature:1731737-1733022:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1757968-1758948:-1:exon

position:1757968:-1
position: 1757968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1756311-1756546:-1:exon

position:1756311:-1
position: 1756311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756546:-1
position: 1756546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1736053-1736151:-1:exon

position:1736053:-1
position: 1736053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1736151:-1
position: 1736151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1734983-1735128:-1:exon

position:1734983:-1
position: 1734983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1735128:-1
position: 1735128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1733105-1733236:-1:exon

position:1733105:-1
position: 1733105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1733236:-1
position: 1733236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1731737-1733022:-1:exon

position:1733022:-1
position: 1733022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rdh10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Rdh10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 10
translation: MNIVVEFFVVTFKVLWAFVLAAARWLVRPKEKSVAGQVCLITGAGSGLGRLFALEFARRRALLVLWDINTQSNEETAGMVRHIYRDLEAADAAALQAGKGEEEILPPCNLQVFTYTCDVGKRENVYLTAERVRKEVGEVSVLVNNAGVVSGHHLLECPDELIERTMMVNCHAHFWTTKAFLPTMLEINHGHIVTVASSLGLFSTAGVEDYCASKFGVVGFHESLSHELKAAEKDGIKTTLVCPYLVDTGMFRGCRIRKEIEPFLPPLKPDYCVKQAMKAILTDQPMICTPRLMYIVTFMKSILPFEAVVCMYRFLGADKCMYPFIAQRKQATNNNEAKNGI
SIO_010081: Rdh10
subclass of: SO_0000673
so part of: Rdh10
location: complement(join(1732899..1733022,1733105..1733236,1734983..1735128,1736053..1736151,1756311..1756546,1757968..1758256))
location: region:1732899-1758256:-1
so has part: feature:1757968-1758256:-1:exon
so has part: feature:1756311-1756546:-1:exon
so has part: feature:1736053-1736151:-1:exon
so has part: feature:1734983-1735128:-1:exon
so has part: feature:1733105-1733236:-1:exon
so has part: feature:1732899-1733022:-1:exon

XP_021077777.1
type: Protein
SIO_000068: ncbiprotein

position:1732899:-1
position: 1732899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1758256:-1
position: 1758256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1757968-1758256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1756311-1756546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1736053-1736151:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1734983-1735128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1733105-1733236:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1732899-1733022:-1:exon

Rpl7
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Rpl7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1759852..1762219
location: region:1759852-1762219:1
so has part: feature:1759852-1762219:1:exon
subclass of: SO_0000010

110338710
type: Gene
SIO_000068: ncbigene

position:1759852:1
position: 1759852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1762219:1
position: 1762219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1759852-1762219:1:exon

Rpl7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Rpl7
product: ribosomal protein L7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 mRNAs, 9 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021222120.2
SIO_010081: Rpl7
subclass of: SO_0000673
so part of: Rpl7
location: join(1759852..1759912,1760568..1760742,1760926..1761092,1761362..1761499,1761599..1761918,1762151..1762219)
location: region:1759852-1762219:1
so has part: feature:1759852-1759912:1:exon
so has part: feature:1760568-1760742:1:exon
so has part: feature:1760926-1761092:1:exon
so has part: feature:1761362-1761499:1:exon
so has part: feature:1761599-1761918:1:exon
so has part: feature:1762151-1762219:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1759852-1759912:1:exon

position:1759912:1
position: 1759912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1760568-1760742:1:exon

position:1760568:1
position: 1760568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1760742:1
position: 1760742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1760926-1761092:1:exon

position:1760926:1
position: 1760926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1761092:1
position: 1761092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1761362-1761499:1:exon

position:1761362:1
position: 1761362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1761499:1
position: 1761499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1761599-1761918:1:exon

position:1761599:1
position: 1761599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1761918:1
position: 1761918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1762151-1762219:1:exon

position:1762151:1
position: 1762151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rpl7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Rpl7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L7
translation: MEAVPEKKKKVATGPETLKKKVPAVSKTLKKKVPSVPETLKKKRRNFAELKVKRLRKKFALKTLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIHEIYTVGKHFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN
SIO_010081: Rpl7
subclass of: SO_0000673
so part of: Rpl7
location: join(1759899..1759912,1760568..1760742,1760926..1761092,1761362..1761499,1761599..1761917)
location: region:1759899-1761917:1
so has part: feature:1759899-1759912:1:exon
so has part: feature:1760568-1760742:1:exon
so has part: feature:1760926-1761092:1:exon
so has part: feature:1761362-1761499:1:exon
so has part: feature:1761599-1761917:1:exon

XP_021077779.1
type: Protein
SIO_000068: ncbiprotein

position:1759899:1
position: 1759899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1761917:1
position: 1761917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1759899-1759912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1760568-1760742:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1760926-1761092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1761362-1761499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1761599-1761917:1:exon

C22H8orf89
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: C22H8orf89
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1769887..1793397
location: region:1769887-1793397:1
so has part: feature:1769887-1793397:1:exon
subclass of: SO_0000010

110338602
type: Gene
SIO_000068: ncbigene

position:1769887:1
position: 1769887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1793397:1
position: 1793397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1769887-1793397:1:exon

C22H8orf89
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: C22H8orf89
product: chromosome 22 C8orf89 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 44% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021221893.1
SIO_010081: C22H8orf89
subclass of: SO_0000673
so part of: C22H8orf89
location: join(1769887..1770222,1782890..1783053,1785152..1785284,1791113..1791168,1793103..1793397)
location: region:1769887-1793397:1
so has part: feature:1769887-1770222:1:exon
so has part: feature:1782890-1783053:1:exon
so has part: feature:1785152-1785284:1:exon
so has part: feature:1791113-1791168:1:exon
so has part: feature:1793103-1793397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1769887-1770222:1:exon

position:1770222:1
position: 1770222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1782890-1783053:1:exon

position:1782890:1
position: 1782890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1783053:1
position: 1783053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1785152-1785284:1:exon

position:1785152:1
position: 1785152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1785284:1
position: 1785284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1791113-1791168:1:exon

position:1791113:1
position: 1791113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1791168:1
position: 1791168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1793103-1793397:1:exon

position:1793103:1
position: 1793103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C22H8orf89
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: C22H8orf89
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C8orf89 homolog
translation: MPMLSPEIKFETSNVTRSNLDNCFLFESSWRKAVLETQKMRKAFGLEEPKECLKMPYLPELSKSLSSSSLEAHKRLLHTEAEIPPIRIKKTKESCSVAALQEKSKGSVFSDPFTGAPSDFLQRLSRMAILEYDTIRQETHKKLRRGKKRELRDC
SIO_010081: C22H8orf89
subclass of: SO_0000673
so part of: C22H8orf89
location: join(1782927..1783053,1785152..1785284,1791113..1791168,1793103..1793251)
location: region:1782927-1793251:1
so has part: feature:1782927-1783053:1:exon
so has part: feature:1785152-1785284:1:exon
so has part: feature:1791113-1791168:1:exon
so has part: feature:1793103-1793251:1:exon

XP_021077552.1
type: Protein
SIO_000068: ncbiprotein

position:1782927:1
position: 1782927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1793251:1
position: 1793251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1782927-1783053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1785152-1785284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1791113-1791168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1793103-1793251:1:exon

LOC110338889
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110338889
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1807392..1807957)
location: region:1807392-1807957:-1
so has part: feature:1807392-1807957:-1:exon

110338889
type: Gene
SIO_000068: ncbigene

position:1807392:-1
position: 1807392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1807957:-1
position: 1807957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1807392-1807957:-1:exon

LOC110338889
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338889
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110338889
subclass of: SO_0000673
so part of: LOC110338889
location: complement(1807392..1807957)
location: region:1807392-1807957:-1
so has part: feature:1807392-1807957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1807392-1807957:-1:exon

Sbspon
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Sbspon
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1938130..1967261
location: region:1938130-1967261:1
so has part: feature:1938130-1967261:1:exon
subclass of: SO_0000010

110338962
type: Gene
SIO_000068: ncbigene

position:1938130:1
position: 1938130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1967261:1
position: 1967261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1938130-1967261:1:exon

Sbspon
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Sbspon
product: somatomedin B and thrombospondin type 1 domain containing, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021222434.2
SIO_010081: Sbspon
subclass of: SO_0000673
so part of: Sbspon
location: join(1938130..1938398,1947174..1947368,1960540..1960627,1962009..1962185,1965553..1967261)
location: region:1938130-1967261:1
so has part: feature:1938130-1938398:1:exon
so has part: feature:1947174-1947368:1:exon
so has part: feature:1960540-1960627:1:exon
so has part: feature:1962009-1962185:1:exon
so has part: feature:1965553-1967261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1938130-1938398:1:exon

position:1938398:1
position: 1938398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1947174-1947368:1:exon

position:1947174:1
position: 1947174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1947368:1
position: 1947368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1960540-1960627:1:exon

position:1960540:1
position: 1960540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1960627:1
position: 1960627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1962009-1962185:1:exon

position:1962009:1
position: 1962009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1962185:1
position: 1962185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1965553-1967261:1:exon

position:1965553:1
position: 1965553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sbspon
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Sbspon
product: somatomedin B and thrombospondin type 1 domain containing, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533372.1
SIO_010081: Sbspon
subclass of: SO_0000673
so part of: Sbspon
location: join(1938130..1938398,1947174..1947221,1960540..1960627,1962009..1962185,1965553..1967261)
location: region:1938130-1967261:1
so has part: feature:1938130-1938398:1:exon
so has part: feature:1947174-1947221:1:exon
so has part: feature:1960540-1960627:1:exon
so has part: feature:1962009-1962185:1:exon
so has part: feature:1965553-1967261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1938130-1938398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1947174-1947221:1:exon

position:1947221:1
position: 1947221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1960540-1960627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1962009-1962185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1965553-1967261:1:exon

Sbspon
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Sbspon
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: somatomedin-B and thrombospondin type-1 domain-containing protein isoform X1
translation: MRTLWMVLCALARLWPGALAGCAEAGRCCPGRDPACFALGWRLDRVYGTCFCDQACHLTGDCCFDYDRACPARPCFVGEWSPWSGCAGQCQPTTRVRRRSVRQEPLNGGAPCPPLEERAGCLEYSSSQGQDCGHSFVPAFITSSAFNKKRMSTESPQWSTHTEDAGYCMEFKTESLTPHCALYSSPLTRWMQYLRVGYTVCVGCQPPAMSSVSLRCSGDGLDSDGNQTLRWQAIGNPRCQGTWKKVRRVDQCSCPDVHRFIFI
SIO_010081: Sbspon
subclass of: SO_0000673
so part of: Sbspon
location: join(1938185..1938398,1947174..1947368,1960540..1960627,1962009..1962185,1965553..1965670)
location: region:1938185-1965670:1
so has part: feature:1938185-1938398:1:exon
so has part: feature:1947174-1947368:1:exon
so has part: feature:1960540-1960627:1:exon
so has part: feature:1962009-1962185:1:exon
so has part: feature:1965553-1965670:1:exon

XP_021078093.1
type: Protein
SIO_000068: ncbiprotein

position:1938185:1
position: 1938185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1965670:1
position: 1965670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1938185-1938398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1947174-1947368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1960540-1960627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1962009-1962185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1965553-1965670:1:exon

Sbspon
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Sbspon
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: somatomedin-B and thrombospondin type-1 domain-containing protein isoform X2
translation: MRTLWMVLCALARLWPGALAGCAEAGRCCPGRDPACFALGWRLDRVYGTCFCDQACHLTGDCCFDYDRACPARPCFVGEWSPWSGCAVPAFITSSAFNKKRMSTESPQWSTHTEDAGYCMEFKTESLTPHCALYSSPLTRWMQYLRVGYTVCVGCQPPAMSSVSLRCSGDGLDSDGNQTLRWQAIGNPRCQGTWKKVRRVDQCSCPDVHRFIFI
SIO_010081: Sbspon
subclass of: SO_0000673
so part of: Sbspon
location: join(1938185..1938398,1947174..1947221,1960540..1960627,1962009..1962185,1965553..1965670)
location: region:1938185-1965670:1
so has part: feature:1938185-1938398:1:exon
so has part: feature:1947174-1947221:1:exon
so has part: feature:1960540-1960627:1:exon
so has part: feature:1962009-1962185:1:exon
so has part: feature:1965553-1965670:1:exon

XP_029389232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1938185-1938398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1947174-1947221:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1960540-1960627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1962009-1962185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1965553-1965670:1:exon

Terf1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Terf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1977163..2004342)
location: region:1977163-2004342:-1
so has part: feature:1977163-2004342:-1:exon
subclass of: SO_0000010

110338837
type: Gene
SIO_000068: ncbigene

position:1977163:-1
position: 1977163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2004342:-1
position: 2004342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1977163-2004342:-1:exon

Terf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Terf1
product: telomeric repeat binding factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021222299.2
SIO_010081: Terf1
subclass of: SO_0000673
so part of: Terf1
location: complement(join(1977163..1977662,1982422..1982528,1985376..1985464,1986067..1986126,1989060..1989172,1989724..1989873,1992799..1992885,1994580..1994701,2002411..2002506,2004067..2004342))
location: region:1977163-2004342:-1
so has part: feature:2004067-2004342:-1:exon
so has part: feature:2002411-2002506:-1:exon
so has part: feature:1994580-1994701:-1:exon
so has part: feature:1992799-1992885:-1:exon
so has part: feature:1989724-1989873:-1:exon
so has part: feature:1989060-1989172:-1:exon
so has part: feature:1986067-1986126:-1:exon
so has part: feature:1985376-1985464:-1:exon
so has part: feature:1982422-1982528:-1:exon
so has part: feature:1977163-1977662:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2004067-2004342:-1:exon

position:2004067:-1
position: 2004067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2002411-2002506:-1:exon

position:2002411:-1
position: 2002411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2002506:-1
position: 2002506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1994580-1994701:-1:exon

position:1994580:-1
position: 1994580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1994701:-1
position: 1994701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1992799-1992885:-1:exon

position:1992799:-1
position: 1992799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1992885:-1
position: 1992885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1989724-1989873:-1:exon

position:1989724:-1
position: 1989724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1989873:-1
position: 1989873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1989060-1989172:-1:exon

position:1989060:-1
position: 1989060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1989172:-1
position: 1989172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1986067-1986126:-1:exon

position:1986067:-1
position: 1986067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1986126:-1
position: 1986126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1985376-1985464:-1:exon

position:1985376:-1
position: 1985376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1985464:-1
position: 1985464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1982422-1982528:-1:exon

position:1982422:-1
position: 1982422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1982528:-1
position: 1982528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1977163-1977662:-1:exon

position:1977662:-1
position: 1977662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Terf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Terf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 1
translation: MAEAVSSAARTGSDSPEKEEVGDDAELLQCPMQLGTPREEENAALVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRDSAEAIIHGLHSLTAYQLKTVYICQFLTRVAAGKALDAQFEVDERITPLESALMIWDSIEKEHDRLHEEIQNLIKIQAVAVCMEIGSFKEAEEVFERIFGDPEFYTPLERKLLKIISQKDVFHSFFQHFSYNCMMKKIQSYVDCVLNEKSSTFLMKAATKVVENEKARTLASKDRPSATNTGMETEVGLNKGESINCQQSTETESLVDTVSSIRSHKNALSQLKHRSALSDLSKNEARTGTLQCEITTKRNRRTSGRNKLCISKNQPETNEKHGHRKKQTWLWEEDRILKCGVKKYGEGNWAKILSHYKFNNRTSVMLKDRWRTMKKLKLIS
SIO_010081: Terf1
subclass of: SO_0000673
so part of: Terf1
location: complement(join(1977501..1977662,1982422..1982528,1985376..1985464,1986067..1986126,1989060..1989172,1989724..1989873,1992799..1992885,1994580..1994701,2002411..2002506,2004067..2004322))
location: region:1977501-2004322:-1
so has part: feature:2004067-2004322:-1:exon
so has part: feature:2002411-2002506:-1:exon
so has part: feature:1994580-1994701:-1:exon
so has part: feature:1992799-1992885:-1:exon
so has part: feature:1989724-1989873:-1:exon
so has part: feature:1989060-1989172:-1:exon
so has part: feature:1986067-1986126:-1:exon
so has part: feature:1985376-1985464:-1:exon
so has part: feature:1982422-1982528:-1:exon
so has part: feature:1977501-1977662:-1:exon

XP_021077958.1
type: Protein
SIO_000068: ncbiprotein

position:1977501:-1
position: 1977501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2004322:-1
position: 2004322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2004067-2004322:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2002411-2002506:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1994580-1994701:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1992799-1992885:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1989724-1989873:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1989060-1989172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1986067-1986126:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1985376-1985464:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1982422-1982528:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1977501-1977662:-1:exon

LOC115063056
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115063056
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2048188..2048318)
location: region:2048188-2048318:-1
so has part: feature:2048188-2048318:-1:exon
subclass of: SO_0000578

115063056
type: Gene
SIO_000068: ncbigene

position:2048188:-1
position: 2048188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2048318:-1
position: 2048318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2048188-2048318:-1:exon

LOC115063056
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snoRNA
gene: LOC115063056
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842935.1
SIO_010081: LOC115063056
subclass of: SO_0000673
so part of: LOC115063056
location: complement(2048188..2048318)
location: region:2048188-2048318:-1
so has part: feature:2048188-2048318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2048188-2048318:-1:exon

Kcnb2
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Kcnb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2084954..2504392)
location: region:2084954-2504392:-1
so has part: feature:2084954-2504392:-1:exon
subclass of: SO_0000010

110338844
type: Gene
SIO_000068: ncbigene

position:2084954:-1
position: 2084954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2504392:-1
position: 2504392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2084954-2504392:-1:exon

Kcnb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Kcnb2
product: potassium voltage-gated channel subfamily B member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533359.1
SIO_010081: Kcnb2
subclass of: SO_0000673
so part of: Kcnb2
location: complement(join(2084954..2088921,2476084..2476751,2503745..2504392))
location: region:2084954-2504392:-1
so has part: feature:2503745-2504392:-1:exon
so has part: feature:2476084-2476751:-1:exon
so has part: feature:2084954-2088921:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2503745-2504392:-1:exon

position:2503745:-1
position: 2503745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2476084-2476751:-1:exon

position:2476084:-1
position: 2476084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2476751:-1
position: 2476751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2084954-2088921:-1:exon

position:2088921:-1
position: 2088921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Kcnb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Kcnb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily B member 2
translation: MAEKAPPGLNRKTSRSTLSLPPEPVDIIRSKTCSRRVKINVGGLNHEVLWRTLDRLPRTRLGKLRDCNTHESLLEVCDDYNLNENEYFFDRHPGAFTSILNFYRTGKLHMMEEMCALSFGQELDYWGIDEIYLESCCQARYHQKKEQMNEELRREAETMREREGEEFDNTCCPEKRKKLWDLLEKPNSSVAAKILAIVSILFIVLSTIALSLNTLPELQENDEFGQPSDNRKLAHVEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEKDEDATKFTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNLKDAFARSMELIDVAVEKAGESANTKDSVDDNHLSPSRWKWARKALSETSSNKSYENKYQEVSQKDSHEQLNNTSASSPQHLSAQKLEMLYNEITKTQPHSHPNPDCQEQPERPSAYEEEIEMEEVICPQEQLAVAQTEVIVDMKSTSSIDSFTSCATDFTETERSPLPPPSASHLQMKFPMDLPGTDEHQRARAPPFLTLSRDKGPAAREAAMDYAPIDITVNLDAGASHGPLQPDSASDSPKSSLKGSNPLKSRSLKVNFQENRASAPQTPPSTARPLPVTTADFPLATPQHMSTILLEEALPQGQRPLLEADVSAHCQGPSKGFSPRFPKQKLFPFSSRERRSFTEIDTGEDEDFLDLQRSRPDKQADPSSNCLADKPGDARDSSREEGSVGSSSPQNTDHNCRQDIYQAVGEAKKDSSQEGYKMENHLFAPEIHSNPGDTGHCPTRETSM
SIO_010081: Kcnb2
subclass of: SO_0000673
so part of: Kcnb2
location: complement(join(2086777..2088921,2476084..2476662))
location: region:2086777-2476662:-1
so has part: feature:2476084-2476662:-1:exon
so has part: feature:2086777-2088921:-1:exon

XP_029389219.1
type: Protein
SIO_000068: ncbiprotein

position:2086777:-1
position: 2086777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2476662:-1
position: 2476662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2476084-2476662:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2086777-2088921:-1:exon

LOC115062991
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062991
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 2111563..2111674
location: region:2111563-2111674:1
so has part: feature:2111563-2111674:1:exon

115062991
type: Gene
SIO_000068: ncbigene

position:2111563:1
position: 2111563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2111674:1
position: 2111674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2111563-2111674:1:exon

LOC115062991
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC115062991
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC115062991
subclass of: SO_0000673
so part of: LOC115062991
location: 2111563..2111674
location: region:2111563-2111674:1
so has part: feature:2111563-2111674:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2111563-2111674:1:exon

LOC115062939
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2182617..2223811
location: region:2182617-2223811:1
so has part: feature:2182617-2223811:1:exon
subclass of: SO_0000011

115062939
type: Gene
SIO_000068: ncbigene

position:2182617:1
position: 2182617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2223811:1
position: 2223811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2182617-2223811:1:exon

LOC115062939
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: lncRNA
gene: LOC115062939
product: uncharacterized LOC115062939, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003842844.1
SIO_010081: LOC115062939
subclass of: SO_0000673
so part of: LOC115062939
location: join(2182617..2182775,2187557..2187758,2200024..2200173,2210210..2210305,2223034..2223811)
location: region:2182617-2223811:1
so has part: feature:2182617-2182775:1:exon
so has part: feature:2187557-2187758:1:exon
so has part: feature:2200024-2200173:1:exon
so has part: feature:2210210-2210305:1:exon
so has part: feature:2223034-2223811:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2182617-2182775:1:exon

position:2182775:1
position: 2182775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2187557-2187758:1:exon

position:2187557:1
position: 2187557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2187758:1
position: 2187758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2200024-2200173:1:exon

position:2200024:1
position: 2200024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2200173:1
position: 2200173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2210210-2210305:1:exon

position:2210210:1
position: 2210210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2210305:1
position: 2210305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2223034-2223811:1:exon

position:2223034:1
position: 2223034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115062939
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: lncRNA
gene: LOC115062939
product: uncharacterized LOC115062939, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003842845.1
SIO_010081: LOC115062939
subclass of: SO_0000673
so part of: LOC115062939
location: join(2182617..2182775,2187557..2187758,2200024..2200173,2223034..2223811)
location: region:2182617-2223811:1
so has part: feature:2182617-2182775:1:exon
so has part: feature:2187557-2187758:1:exon
so has part: feature:2200024-2200173:1:exon
so has part: feature:2223034-2223811:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2182617-2182775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2187557-2187758:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2200024-2200173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2223034-2223811:1:exon

LOC110339003
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110339003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2504058..2569069)
location: region:2504058-2569069:-1
so has part: feature:2504058-2569069:-1:exon

110339003
type: Gene
SIO_000068: ncbigene

position:2504058:-1
position: 2504058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2569069:-1
position: 2569069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2504058-2569069:-1:exon

LOC110339003
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339003
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC110339003
subclass of: SO_0000673
so part of: LOC110339003
location: complement(2504058..2504862)
location: region:2504058-2504862:-1
so has part: feature:2504058-2504862:-1:exon

position:2504862:-1
position: 2504862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2504058-2504862:-1:exon

LOC110339003
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339003
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC110339003
subclass of: SO_0000673
so part of: LOC110339003
location: complement(2564361..2564983)
location: region:2564361-2564983:-1
so has part: feature:2564361-2564983:-1:exon

position:2564361:-1
position: 2564361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2564983:-1
position: 2564983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2564361-2564983:-1:exon

LOC110339003
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339003
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC110339003
subclass of: SO_0000673
so part of: LOC110339003
location: complement(2565046..2565257)
location: region:2565046-2565257:-1
so has part: feature:2565046-2565257:-1:exon

position:2565046:-1
position: 2565046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2565257:-1
position: 2565257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2565046-2565257:-1:exon

LOC110339003
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339003
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC110339003
subclass of: SO_0000673
so part of: LOC110339003
location: complement(2565864..2567163)
location: region:2565864-2567163:-1
so has part: feature:2565864-2567163:-1:exon

position:2565864:-1
position: 2565864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2567163:-1
position: 2567163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2565864-2567163:-1:exon

LOC110339003
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339003
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC110339003
subclass of: SO_0000673
so part of: LOC110339003
location: complement(2567488..2567596)
location: region:2567488-2567596:-1
so has part: feature:2567488-2567596:-1:exon

position:2567488:-1
position: 2567488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2567596:-1
position: 2567596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2567488-2567596:-1:exon

LOC110339003
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339003
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC110339003
subclass of: SO_0000673
so part of: LOC110339003
location: complement(2568796..2569069)
location: region:2568796-2569069:-1
so has part: feature:2568796-2569069:-1:exon

position:2568796:-1
position: 2568796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2568796-2569069:-1:exon

LOC115063053
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115063053
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2730854..2730982
location: region:2730854-2730982:1
so has part: feature:2730854-2730982:1:exon
subclass of: SO_0000578

115063053
type: Gene
SIO_000068: ncbigene

position:2730854:1
position: 2730854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2730982:1
position: 2730982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2730854-2730982:1:exon

LOC115063053
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snoRNA
gene: LOC115063053
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842933.1
SIO_010081: LOC115063053
subclass of: SO_0000673
so part of: LOC115063053
location: 2730854..2730982
location: region:2730854-2730982:1
so has part: feature:2730854-2730982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2730854-2730982:1:exon

Trpa1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Trpa1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2808393..2856320
location: region:2808393-2856320:1
so has part: feature:2808393-2856320:1:exon
subclass of: SO_0000010

110338816
type: Gene
SIO_000068: ncbigene

position:2808393:1
position: 2808393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2856320:1
position: 2856320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2808393-2856320:1:exon

Trpa1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Trpa1
product: transient receptor potential cation channel subfamily A member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 4 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021222273.1
SIO_010081: Trpa1
subclass of: SO_0000673
so part of: Trpa1
location: join(2808393..2808524,2814532..2814691,2816104..2816279,2820903..2821010,2822455..2822563,2822724..2822869,2823724..2823860,2825461..2825509,2827189..2827288,2827934..2828034,2828954..2829123,2829206..2829370,2830996..2831110,2834105..2834271,2836050..2836143,2837011..2837070,2837970..2838068,2839801..2839871,2840426..2840591,2841691..2841780,2843245..2843414,2845145..2845274,2845636..2845818,2848154..2848222,2852977..2853087,2854501..2854598,2855232..2856320)
location: region:2808393-2856320:1
so has part: feature:2808393-2808524:1:exon
so has part: feature:2814532-2814691:1:exon
so has part: feature:2816104-2816279:1:exon
so has part: feature:2820903-2821010:1:exon
so has part: feature:2822455-2822563:1:exon
so has part: feature:2822724-2822869:1:exon
so has part: feature:2823724-2823860:1:exon
so has part: feature:2825461-2825509:1:exon
so has part: feature:2827189-2827288:1:exon
so has part: feature:2827934-2828034:1:exon
so has part: feature:2828954-2829123:1:exon
so has part: feature:2829206-2829370:1:exon
so has part: feature:2830996-2831110:1:exon
so has part: feature:2834105-2834271:1:exon
so has part: feature:2836050-2836143:1:exon
so has part: feature:2837011-2837070:1:exon
so has part: feature:2837970-2838068:1:exon
so has part: feature:2839801-2839871:1:exon
so has part: feature:2840426-2840591:1:exon
so has part: feature:2841691-2841780:1:exon
so has part: feature:2843245-2843414:1:exon
so has part: feature:2845145-2845274:1:exon
so has part: feature:2845636-2845818:1:exon
so has part: feature:2848154-2848222:1:exon
so has part: feature:2852977-2853087:1:exon
so has part: feature:2854501-2854598:1:exon
so has part: feature:2855232-2856320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2808393-2808524:1:exon

position:2808524:1
position: 2808524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2814532-2814691:1:exon

position:2814532:1
position: 2814532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2814691:1
position: 2814691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2816104-2816279:1:exon

position:2816104:1
position: 2816104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2816279:1
position: 2816279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2820903-2821010:1:exon

position:2820903:1
position: 2820903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2821010:1
position: 2821010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2822455-2822563:1:exon

position:2822455:1
position: 2822455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2822563:1
position: 2822563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2822724-2822869:1:exon

position:2822724:1
position: 2822724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2822869:1
position: 2822869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2823724-2823860:1:exon

position:2823724:1
position: 2823724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2823860:1
position: 2823860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2825461-2825509:1:exon

position:2825461:1
position: 2825461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2825509:1
position: 2825509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2827189-2827288:1:exon

position:2827189:1
position: 2827189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2827288:1
position: 2827288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2827934-2828034:1:exon

position:2827934:1
position: 2827934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2828034:1
position: 2828034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2828954-2829123:1:exon

position:2828954:1
position: 2828954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2829123:1
position: 2829123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2829206-2829370:1:exon

position:2829206:1
position: 2829206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2829370:1
position: 2829370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2830996-2831110:1:exon

position:2830996:1
position: 2830996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2831110:1
position: 2831110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2834105-2834271:1:exon

position:2834105:1
position: 2834105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2834271:1
position: 2834271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2836050-2836143:1:exon

position:2836050:1
position: 2836050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2836143:1
position: 2836143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2837011-2837070:1:exon

position:2837011:1
position: 2837011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2837070:1
position: 2837070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2837970-2838068:1:exon

position:2837970:1
position: 2837970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2838068:1
position: 2838068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2839801-2839871:1:exon

position:2839801:1
position: 2839801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2839871:1
position: 2839871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2840426-2840591:1:exon

position:2840426:1
position: 2840426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2840591:1
position: 2840591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2841691-2841780:1:exon

position:2841691:1
position: 2841691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2841780:1
position: 2841780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2843245-2843414:1:exon

position:2843245:1
position: 2843245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2843414:1
position: 2843414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2845145-2845274:1:exon

position:2845145:1
position: 2845145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2845274:1
position: 2845274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2845636-2845818:1:exon

position:2845636:1
position: 2845636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2845818:1
position: 2845818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2848154-2848222:1:exon

position:2848154:1
position: 2848154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2848222:1
position: 2848222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2852977-2853087:1:exon

position:2852977:1
position: 2852977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2853087:1
position: 2853087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2854501-2854598:1:exon

position:2854501:1
position: 2854501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2854598:1
position: 2854598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2855232-2856320:1:exon

position:2855232:1
position: 2855232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Trpa1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Trpa1
product: transient receptor potential cation channel subfamily A member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021222275.1
SIO_010081: Trpa1
subclass of: SO_0000673
so part of: Trpa1
location: join(2808393..2808524,2814532..2814691,2816104..2816279,2820903..2821010,2822455..2822563,2822724..2822869,2823724..2823860,2825461..2825509,2827189..2827288,2827934..2828034,2828954..2829123,2829206..2829370,2830996..2831110,2834105..2834271,2836050..2836143,2837011..2837070,2837970..2838068,2839801..2839871,2840426..2840591,2843245..2843414,2845145..2845274,2845636..2845818,2848154..2848222,2852977..2853087,2854501..2854598,2855232..2856320)
location: region:2808393-2856320:1
so has part: feature:2808393-2808524:1:exon
so has part: feature:2814532-2814691:1:exon
so has part: feature:2816104-2816279:1:exon
so has part: feature:2820903-2821010:1:exon
so has part: feature:2822455-2822563:1:exon
so has part: feature:2822724-2822869:1:exon
so has part: feature:2823724-2823860:1:exon
so has part: feature:2825461-2825509:1:exon
so has part: feature:2827189-2827288:1:exon
so has part: feature:2827934-2828034:1:exon
so has part: feature:2828954-2829123:1:exon
so has part: feature:2829206-2829370:1:exon
so has part: feature:2830996-2831110:1:exon
so has part: feature:2834105-2834271:1:exon
so has part: feature:2836050-2836143:1:exon
so has part: feature:2837011-2837070:1:exon
so has part: feature:2837970-2838068:1:exon
so has part: feature:2839801-2839871:1:exon
so has part: feature:2840426-2840591:1:exon
so has part: feature:2843245-2843414:1:exon
so has part: feature:2845145-2845274:1:exon
so has part: feature:2845636-2845818:1:exon
so has part: feature:2848154-2848222:1:exon
so has part: feature:2852977-2853087:1:exon
so has part: feature:2854501-2854598:1:exon
so has part: feature:2855232-2856320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2808393-2808524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2814532-2814691:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2816104-2816279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2820903-2821010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2822455-2822563:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2822724-2822869:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2823724-2823860:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2825461-2825509:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2827189-2827288:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2827934-2828034:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2828954-2829123:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2829206-2829370:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2830996-2831110:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2834105-2834271:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2836050-2836143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2837011-2837070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2837970-2838068:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2839801-2839871:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2840426-2840591:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2843245-2843414:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2845145-2845274:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2845636-2845818:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2848154-2848222:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2852977-2853087:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2854501-2854598:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2855232-2856320:1:exon

Trpa1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Trpa1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transient receptor potential cation channel subfamily A member 1 isoform X1
translation: MKRSLRRILRPEERKEVQGVVYCGVGEDMDCSKESFKVDIEGDMCRLEDFIKNRRNLSKYEDENLCPLHHAAAEGQVELMELIINGSSCEVLNIMDGYGNTPLHCAAEKNQVESVKFLLSQGANPNLRNRNMMSPLHIAVHGMYNEVIKVLTEHKATNINLEGENGNTALMSTCAKDNSEALQILLEKGAKLCKSNKWGDYPVHQAAFSGAKKCMELILVYGEKAGYSRESHINFVNHKKASPLHLAVQSGDLDMIKMCLDNGAHIDMMENAKCMALHFAATQGATDIVKLMISSYTGSSDIVNAVDGNQETLLHRASLFDHHDLADYLISVGADINSTDSEGRSPLILATASASWNIVNLLLSKGAKVDIKDHLGRNFLHLTVQQPYGLRNLQPEFMQMQHIKELVMDEDNDGCTPLHYACRQGVPVSVNNLLGFNVSIHSKTKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASMGGYTQTMKVILDTNLKCTDRLDEEGNTALHFAAREGHAKAVAMLLSYNADILLNKKQASFLHIALHNKRKEVVLTTIRNKRWDECLQVFTHDSPSNRCPIMEMVEYLPECMKVLLDFCMIPSTEDKSCQDYHIEYNFKYLQCPLSMTKKVAPTQDVIYEPLTILNVMVQHNRIELLNHPVCREYLLMKWCAYGFRAHMMNLGSYCLGLIPMTLLVVKIQPGMAFNSTGIINGTSSTHEERIDTLNSFPIKICMILVFLSSIFGYCKEVIQIFQQKRNYFLDYNNALEWVIYTTSIIFVLPLFLEIPAYMQWQCGAIAIFFYWMNFLLYLQRFENCGIFIVMLEVIFKTLLRSTGVFIFLLLAFSLSFYVLLNFQDAFSTPLLSLIQTFSMMLGDINYRDAFLEPLFRNELAYPILTFGQLIAFTMFVPIVLMNLLIGLAVGDIAEVQKHASLKRIAMQVELHTNLEKKLPLWYLRKVDQRSTIVYPNRPRHGRMLRFFHYFLSKQETRQEVPNIDTCLEMEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETEDEDNHCSFQDRFKKERLEQMHSKWNFVLNAVKTKTRCSISHPDF
SIO_010081: Trpa1
subclass of: SO_0000673
so part of: Trpa1
location: join(2808414..2808524,2814532..2814691,2816104..2816279,2820903..2821010,2822455..2822563,2822724..2822869,2823724..2823860,2825461..2825509,2827189..2827288,2827934..2828034,2828954..2829123,2829206..2829370,2830996..2831110,2834105..2834271,2836050..2836143,2837011..2837070,2837970..2838068,2839801..2839871,2840426..2840591,2841691..2841780,2843245..2843414,2845145..2845274,2845636..2845818,2848154..2848222,2852977..2853087,2854501..2854598,2855232..2855454)
location: region:2808414-2855454:1
so has part: feature:2808414-2808524:1:exon
so has part: feature:2814532-2814691:1:exon
so has part: feature:2816104-2816279:1:exon
so has part: feature:2820903-2821010:1:exon
so has part: feature:2822455-2822563:1:exon
so has part: feature:2822724-2822869:1:exon
so has part: feature:2823724-2823860:1:exon
so has part: feature:2825461-2825509:1:exon
so has part: feature:2827189-2827288:1:exon
so has part: feature:2827934-2828034:1:exon
so has part: feature:2828954-2829123:1:exon
so has part: feature:2829206-2829370:1:exon
so has part: feature:2830996-2831110:1:exon
so has part: feature:2834105-2834271:1:exon
so has part: feature:2836050-2836143:1:exon
so has part: feature:2837011-2837070:1:exon
so has part: feature:2837970-2838068:1:exon
so has part: feature:2839801-2839871:1:exon
so has part: feature:2840426-2840591:1:exon
so has part: feature:2841691-2841780:1:exon
so has part: feature:2843245-2843414:1:exon
so has part: feature:2845145-2845274:1:exon
so has part: feature:2845636-2845818:1:exon
so has part: feature:2848154-2848222:1:exon
so has part: feature:2852977-2853087:1:exon
so has part: feature:2854501-2854598:1:exon
so has part: feature:2855232-2855454:1:exon

XP_021077932.1
type: Protein
SIO_000068: ncbiprotein

position:2808414:1
position: 2808414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2855454:1
position: 2855454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2808414-2808524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2814532-2814691:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2816104-2816279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2820903-2821010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2822455-2822563:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2822724-2822869:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2823724-2823860:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2825461-2825509:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2827189-2827288:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2827934-2828034:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2828954-2829123:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2829206-2829370:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2830996-2831110:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2834105-2834271:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2836050-2836143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2837011-2837070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2837970-2838068:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2839801-2839871:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2840426-2840591:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2841691-2841780:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2843245-2843414:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2845145-2845274:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2845636-2845818:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2848154-2848222:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2852977-2853087:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2854501-2854598:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2855232-2855454:1:exon

Trpa1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Trpa1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transient receptor potential cation channel subfamily A member 1 isoform X2
translation: MKRSLRRILRPEERKEVQGVVYCGVGEDMDCSKESFKVDIEGDMCRLEDFIKNRRNLSKYEDENLCPLHHAAAEGQVELMELIINGSSCEVLNIMDGYGNTPLHCAAEKNQVESVKFLLSQGANPNLRNRNMMSPLHIAVHGMYNEVIKVLTEHKATNINLEGENGNTALMSTCAKDNSEALQILLEKGAKLCKSNKWGDYPVHQAAFSGAKKCMELILVYGEKAGYSRESHINFVNHKKASPLHLAVQSGDLDMIKMCLDNGAHIDMMENAKCMALHFAATQGATDIVKLMISSYTGSSDIVNAVDGNQETLLHRASLFDHHDLADYLISVGADINSTDSEGRSPLILATASASWNIVNLLLSKGAKVDIKDHLGRNFLHLTVQQPYGLRNLQPEFMQMQHIKELVMDEDNDGCTPLHYACRQGVPVSVNNLLGFNVSIHSKTKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASMGGYTQTMKVILDTNLKCTDRLDEEGNTALHFAAREGHAKAVAMLLSYNADILLNKKQASFLHIALHNKRKEVVLTTIRNKRWDECLQVFTHDSPSNRCPIMEMVEYLPECMKVLLDFCMIPSTEDKSCQDYHIEYNFKYLQCPLSMTKKVAPTQDVIYEPLTILNVMVQHNRIELLNHPVCREYLLMKWCAYGFRAHMMNLGSYCLGLIPMTLLVVKIQPGMAFNSTGIINGTSSTHEERIDTLKRNYFLDYNNALEWVIYTTSIIFVLPLFLEIPAYMQWQCGAIAIFFYWMNFLLYLQRFENCGIFIVMLEVIFKTLLRSTGVFIFLLLAFSLSFYVLLNFQDAFSTPLLSLIQTFSMMLGDINYRDAFLEPLFRNELAYPILTFGQLIAFTMFVPIVLMNLLIGLAVGDIAEVQKHASLKRIAMQVELHTNLEKKLPLWYLRKVDQRSTIVYPNRPRHGRMLRFFHYFLSKQETRQEVPNIDTCLEMEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETEDEDNHCSFQDRFKKERLEQMHSKWNFVLNAVKTKTRCSISHPDF
SIO_010081: Trpa1
subclass of: SO_0000673
so part of: Trpa1
location: join(2808414..2808524,2814532..2814691,2816104..2816279,2820903..2821010,2822455..2822563,2822724..2822869,2823724..2823860,2825461..2825509,2827189..2827288,2827934..2828034,2828954..2829123,2829206..2829370,2830996..2831110,2834105..2834271,2836050..2836143,2837011..2837070,2837970..2838068,2839801..2839871,2840426..2840591,2843245..2843414,2845145..2845274,2845636..2845818,2848154..2848222,2852977..2853087,2854501..2854598,2855232..2855454)
location: region:2808414-2855454:1
so has part: feature:2808414-2808524:1:exon
so has part: feature:2814532-2814691:1:exon
so has part: feature:2816104-2816279:1:exon
so has part: feature:2820903-2821010:1:exon
so has part: feature:2822455-2822563:1:exon
so has part: feature:2822724-2822869:1:exon
so has part: feature:2823724-2823860:1:exon
so has part: feature:2825461-2825509:1:exon
so has part: feature:2827189-2827288:1:exon
so has part: feature:2827934-2828034:1:exon
so has part: feature:2828954-2829123:1:exon
so has part: feature:2829206-2829370:1:exon
so has part: feature:2830996-2831110:1:exon
so has part: feature:2834105-2834271:1:exon
so has part: feature:2836050-2836143:1:exon
so has part: feature:2837011-2837070:1:exon
so has part: feature:2837970-2838068:1:exon
so has part: feature:2839801-2839871:1:exon
so has part: feature:2840426-2840591:1:exon
so has part: feature:2843245-2843414:1:exon
so has part: feature:2845145-2845274:1:exon
so has part: feature:2845636-2845818:1:exon
so has part: feature:2848154-2848222:1:exon
so has part: feature:2852977-2853087:1:exon
so has part: feature:2854501-2854598:1:exon
so has part: feature:2855232-2855454:1:exon

XP_021077934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2808414-2808524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2814532-2814691:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2816104-2816279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2820903-2821010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2822455-2822563:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2822724-2822869:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2823724-2823860:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2825461-2825509:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2827189-2827288:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2827934-2828034:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2828954-2829123:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2829206-2829370:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2830996-2831110:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2834105-2834271:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2836050-2836143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2837011-2837070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2837970-2838068:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2839801-2839871:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2840426-2840591:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2843245-2843414:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2845145-2845274:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2845636-2845818:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2848154-2848222:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2852977-2853087:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2854501-2854598:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2855232-2855454:1:exon

LOC110339004
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110339004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2859902..2860174)
location: region:2859902-2860174:-1
so has part: feature:2859902-2860174:-1:exon

110339004
type: Gene
SIO_000068: ncbigene

position:2859902:-1
position: 2859902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2860174:-1
position: 2860174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2859902-2860174:-1:exon

LOC110339004
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339004
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110339004
subclass of: SO_0000673
so part of: LOC110339004
location: complement(2859902..2860174)
location: region:2859902-2860174:-1
so has part: feature:2859902-2860174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2859902-2860174:-1:exon

Msc
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Msc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2985027..2987605
location: region:2985027-2987605:1
so has part: feature:2985027-2987605:1:exon
subclass of: SO_0000010

110338875
type: Gene
SIO_000068: ncbigene

position:2985027:1
position: 2985027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2987605:1
position: 2987605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2985027-2987605:1:exon

Msc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Msc
product: musculin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 7 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021222340.1
SIO_010081: Msc
subclass of: SO_0000673
so part of: Msc
location: join(2985027..2985781,2986658..2987605)
location: region:2985027-2987605:1
so has part: feature:2985027-2985781:1:exon
so has part: feature:2986658-2987605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2985027-2985781:1:exon

position:2985781:1
position: 2985781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2986658-2987605:1:exon

position:2986658:1
position: 2986658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Msc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Msc
product: musculin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029533378.1
SIO_010081: Msc
subclass of: SO_0000673
so part of: Msc
location: join(2985027..2985781,2986440..2986463)
location: region:2985027-2986463:1
so has part: feature:2985027-2985781:1:exon
so has part: feature:2986440-2986463:1:exon

position:2986463:1
position: 2986463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2985027-2985781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2986440-2986463:1:exon

position:2986440:1
position: 2986440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Msc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Msc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: musculin isoform X1
translation: MSTGSVSDPEDTEMRGLQRVYPAPASKRPPLLRTERGYASPSDNSSAEEEDPDGEEEPGSLGAAGGCKRKRPRGADTGGAGGGADGAGSAGKKPLPPKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQEDRYEDSYVHPVNLTWPFVVSGRPDSDSKEVSAANRLCGTSA
SIO_010081: Msc
subclass of: SO_0000673
so part of: Msc
location: join(2985248..2985781,2986658..2986744)
location: region:2985248-2986744:1
so has part: feature:2985248-2985781:1:exon
so has part: feature:2986658-2986744:1:exon

XP_021077999.1
type: Protein
SIO_000068: ncbiprotein

position:2985248:1
position: 2985248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2986744:1
position: 2986744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2985248-2985781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2986658-2986744:1:exon

Msc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Msc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: musculin isoform X2
translation: MSTGSVSDPEDTEMRGLQRVYPAPASKRPPLLRTERGYASPSDNSSAEEEDPDGEEEPGSLGAAGGCKRKRPRGADTGGAGGGADGAGSAGKKPLPPKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQEDRYEDSYVHPVNLKNHVGNP
SIO_010081: Msc
subclass of: SO_0000673
so part of: Msc
location: join(2985248..2985781,2986440..2986463)
location: region:2985248-2986463:1
so has part: feature:2985248-2985781:1:exon
so has part: feature:2986440-2986463:1:exon

XP_029389238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2985248-2985781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2986440-2986463:1:exon

LOC110339006
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110339006
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3055779..3070703)
location: region:3055779-3070703:-1
so has part: feature:3055779-3070703:-1:exon

110339006
type: Gene
SIO_000068: ncbigene

position:3055779:-1
position: 3055779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3070703:-1
position: 3070703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3055779-3070703:-1:exon

LOC110339006
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110339006
subclass of: SO_0000673
so part of: LOC110339006
location: complement(3055779..3055885)
location: region:3055779-3055885:-1
so has part: feature:3055779-3055885:-1:exon

position:3055885:-1
position: 3055885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3055779-3055885:-1:exon

LOC110339006
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110339006
subclass of: SO_0000673
so part of: LOC110339006
location: complement(3070227..3070703)
location: region:3070227-3070703:-1
so has part: feature:3070227-3070703:-1:exon

position:3070227:-1
position: 3070227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3070227-3070703:-1:exon

Eya1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3409086..3558156
location: region:3409086-3558156:1
so has part: feature:3409086-3558156:1:exon
subclass of: SO_0000010

110338633
type: Gene
SIO_000068: ncbigene

position:3409086:1
position: 3409086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3558156:1
position: 3558156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3409086-3558156:1:exon

Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 21 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021221951.1
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(3409086..3409653,3414822..3414871,3416391..3416518,3437845..3437922,3444616..3444685,3445011..3445156,3448438..3448560,3466604..3466686,3467090..3467276,3490678..3490817,3492648..3492731,3513056..3513145,3540171..3540229,3540346..3540506,3541283..3541397,3541499..3541620,3544982..3545082,3556122..3558156)
location: region:3409086-3558156:1
so has part: feature:3409086-3409653:1:exon
so has part: feature:3414822-3414871:1:exon
so has part: feature:3416391-3416518:1:exon
so has part: feature:3437845-3437922:1:exon
so has part: feature:3444616-3444685:1:exon
so has part: feature:3445011-3445156:1:exon
so has part: feature:3448438-3448560:1:exon
so has part: feature:3466604-3466686:1:exon
so has part: feature:3467090-3467276:1:exon
so has part: feature:3490678-3490817:1:exon
so has part: feature:3492648-3492731:1:exon
so has part: feature:3513056-3513145:1:exon
so has part: feature:3540171-3540229:1:exon
so has part: feature:3540346-3540506:1:exon
so has part: feature:3541283-3541397:1:exon
so has part: feature:3541499-3541620:1:exon
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Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 17 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021221950.1
SIO_010081: Eya1
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location: region:3409086-3558156:1
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urn:…
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urn:…
SIO_000300: 18
SIO_000628: feature:3556122-3558156:1:exon

Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 19 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021221952.2
SIO_010081: Eya1
subclass of: SO_0000673
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urn:…
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urn:…
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urn:…
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SIO_000300: 12
SIO_000628: feature:3513056-3513145:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3540171-3540229:1:exon

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SIO_000628: feature:3541283-3541397:1:exon

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SIO_000628: feature:3541499-3541620:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3544982-3545082:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3556122-3558156:1:exon

Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021221953.1
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(3409086..3409653,3414822..3414871,3437845..3437922,3444616..3444685,3445014..3445156,3448423..3448560,3466604..3466686,3467090..3467276,3490678..3490817,3492648..3492731,3513056..3513145,3540171..3540229,3540346..3540506,3541283..3541397,3541499..3541620,3544982..3545082,3556122..3558156)
location: region:3409086-3558156:1
so has part: feature:3409086-3409653:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:3409086-3409653:1:exon

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SIO_000300: 2
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SIO_000300: 10
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SIO_000628: feature:3513056-3513145:1:exon

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urn:…
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SIO_000628: feature:3556122-3558156:1:exon

Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021221949.2
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(3409546..3409653,3414822..3414871,3416391..3416518,3437845..3437922,3444616..3444685,3445011..3445156,3448423..3448560,3466604..3466686,3467090..3467276,3490678..3490817,3492648..3492731,3513056..3513145,3540171..3540229,3540346..3540506,3541283..3541397,3541499..3541620,3544982..3545082,3556122..3558091)
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position:3409546:1
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urn:…
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urn:…
SIO_000300: 18
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Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029533327.1
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
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position:3409584:1
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urn:…
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urn:…
SIO_000300: 5
SIO_000628: feature:3445011-3445156:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3448423-3448560:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3466604-3466686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3467090-3467276:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3490678-3490817:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3492648-3492731:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3513056-3513145:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3540171-3540229:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3540346-3540506:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3541283-3541397:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3541499-3541620:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3544982-3545082:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3556122-3558091:1:exon

Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029533326.1
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(3414637..3414871,3437845..3437922,3444616..3444685,3445011..3445156,3448423..3448560,3466604..3466686,3467090..3467276,3490678..3490817,3492648..3492731,3513056..3513145,3540171..3540229,3540346..3540506,3541283..3541397,3541499..3541620,3544982..3545082,3556122..3558091)
location: region:3414637-3558091:1
so has part: feature:3414637-3414871:1:exon
so has part: feature:3437845-3437922:1:exon
so has part: feature:3444616-3444685:1:exon
so has part: feature:3445011-3445156:1:exon
so has part: feature:3448423-3448560:1:exon
so has part: feature:3466604-3466686:1:exon
so has part: feature:3467090-3467276:1:exon
so has part: feature:3490678-3490817:1:exon
so has part: feature:3492648-3492731:1:exon
so has part: feature:3513056-3513145:1:exon
so has part: feature:3540171-3540229:1:exon
so has part: feature:3540346-3540506:1:exon
so has part: feature:3541283-3541397:1:exon
so has part: feature:3541499-3541620:1:exon
so has part: feature:3544982-3545082:1:exon
so has part: feature:3556122-3558091:1:exon

position:3414637:1
position: 3414637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3414637-3414871:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3437845-3437922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3444616-3444685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3445011-3445156:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3448423-3448560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3466604-3466686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3467090-3467276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3490678-3490817:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3492648-3492731:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3513056-3513145:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3540171-3540229:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3540346-3540506:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3541283-3541397:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3541499-3541620:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3544982-3545082:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3556122-3558091:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X4
translation: MLLFPQVAVKTEPMSSSEIASTAADGSLDSFSGSALGSSSFSPRPAHPFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGVTSQAVTDPTAEYSTIHSPSTPIKESDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYSTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(3414847..3414871,3437845..3437922,3444616..3444685,3445011..3445156,3448423..3448560,3466604..3466686,3467090..3467276,3490678..3490817,3492648..3492731,3513056..3513145,3540171..3540229,3540346..3540506,3541283..3541397,3541499..3541620,3544982..3545082,3556122..3556202)
location: region:3414847-3556202:1
so has part: feature:3414847-3414871:1:exon
so has part: feature:3437845-3437922:1:exon
so has part: feature:3444616-3444685:1:exon
so has part: feature:3445011-3445156:1:exon
so has part: feature:3448423-3448560:1:exon
so has part: feature:3466604-3466686:1:exon
so has part: feature:3467090-3467276:1:exon
so has part: feature:3490678-3490817:1:exon
so has part: feature:3492648-3492731:1:exon
so has part: feature:3513056-3513145:1:exon
so has part: feature:3540171-3540229:1:exon
so has part: feature:3540346-3540506:1:exon
so has part: feature:3541283-3541397:1:exon
so has part: feature:3541499-3541620:1:exon
so has part: feature:3544982-3545082:1:exon
so has part: feature:3556122-3556202:1:exon

XP_029389186.1
type: Protein
SIO_000068: ncbiprotein

position:3414847:1
position: 3414847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3556202:1
position: 3556202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3414847-3414871:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3437845-3437922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3444616-3444685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3445011-3445156:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3448423-3448560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3466604-3466686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3467090-3467276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3490678-3490817:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3492648-3492731:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3513056-3513145:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3540171-3540229:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3540346-3540506:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3541283-3541397:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3541499-3541620:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3544982-3545082:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3556122-3556202:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X4
translation: MLLFPQVAVKTEPMSSSEIASTAADGSLDSFSGSALGSSSFSPRPAHPFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGVTSQAVTDPTAEYSTIHSPSTPIKESDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYSTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(3414847..3414871,3437845..3437922,3444616..3444685,3445011..3445156,3448423..3448560,3466604..3466686,3467090..3467276,3490678..3490817,3492648..3492731,3513056..3513145,3540171..3540229,3540346..3540506,3541283..3541397,3541499..3541620,3544982..3545082,3556122..3556202)
location: region:3414847-3556202:1
so has part: feature:3414847-3414871:1:exon
so has part: feature:3437845-3437922:1:exon
so has part: feature:3444616-3444685:1:exon
so has part: feature:3445011-3445156:1:exon
so has part: feature:3448423-3448560:1:exon
so has part: feature:3466604-3466686:1:exon
so has part: feature:3467090-3467276:1:exon
so has part: feature:3490678-3490817:1:exon
so has part: feature:3492648-3492731:1:exon
so has part: feature:3513056-3513145:1:exon
so has part: feature:3540171-3540229:1:exon
so has part: feature:3540346-3540506:1:exon
so has part: feature:3541283-3541397:1:exon
so has part: feature:3541499-3541620:1:exon
so has part: feature:3544982-3545082:1:exon
so has part: feature:3556122-3556202:1:exon

XP_029389187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3414847-3414871:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3437845-3437922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3444616-3444685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3445011-3445156:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3448423-3448560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3466604-3466686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3467090-3467276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3490678-3490817:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3492648-3492731:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3513056-3513145:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3540171-3540229:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3540346-3540506:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3541283-3541397:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3541499-3541620:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3544982-3545082:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3556122-3556202:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X5
translation: MLLFPQVAVKTEPMSSSEIASTAADGSLDSFSGSALGSSSFSPRPAHPFSPPQIYPSKPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGVTSQAVTDPTAEYSTIHSPSTPIKESDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYSTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(3414847..3414871,3437845..3437922,3444616..3444685,3445014..3445156,3448423..3448560,3466604..3466686,3467090..3467276,3490678..3490817,3492648..3492731,3513056..3513145,3540171..3540229,3540346..3540506,3541283..3541397,3541499..3541620,3544982..3545082,3556122..3556202)
location: region:3414847-3556202:1
so has part: feature:3414847-3414871:1:exon
so has part: feature:3437845-3437922:1:exon
so has part: feature:3444616-3444685:1:exon
so has part: feature:3445014-3445156:1:exon
so has part: feature:3448423-3448560:1:exon
so has part: feature:3466604-3466686:1:exon
so has part: feature:3467090-3467276:1:exon
so has part: feature:3490678-3490817:1:exon
so has part: feature:3492648-3492731:1:exon
so has part: feature:3513056-3513145:1:exon
so has part: feature:3540171-3540229:1:exon
so has part: feature:3540346-3540506:1:exon
so has part: feature:3541283-3541397:1:exon
so has part: feature:3541499-3541620:1:exon
so has part: feature:3544982-3545082:1:exon
so has part: feature:3556122-3556202:1:exon

XP_021077612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3414847-3414871:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3437845-3437922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3444616-3444685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3445014-3445156:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3448423-3448560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3466604-3466686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3467090-3467276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3490678-3490817:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3492648-3492731:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3513056-3513145:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3540171-3540229:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3540346-3540506:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3541283-3541397:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3541499-3541620:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3544982-3545082:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3556122-3556202:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X7
translation: MEMQDLTSPHSRLSGSSESPSGPKLDSSHINSTSMTPNGTEVKTEPMSSSEIASTAADGSLDSFSGSALGSSSFSPRPAHPFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGVTSQAVTDPTAEYSTIHSPSTPIKESDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYSTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(3416395..3416518,3437845..3437922,3444616..3444685,3445011..3445156,3448423..3448560,3466604..3466686,3467090..3467276,3490678..3490817,3492648..3492731,3513056..3513145,3540171..3540229,3540346..3540506,3541283..3541397,3541499..3541620,3544982..3545082,3556122..3556202)
location: region:3416395-3556202:1
so has part: feature:3416395-3416518:1:exon
so has part: feature:3437845-3437922:1:exon
so has part: feature:3444616-3444685:1:exon
so has part: feature:3445011-3445156:1:exon
so has part: feature:3448423-3448560:1:exon
so has part: feature:3466604-3466686:1:exon
so has part: feature:3467090-3467276:1:exon
so has part: feature:3490678-3490817:1:exon
so has part: feature:3492648-3492731:1:exon
so has part: feature:3513056-3513145:1:exon
so has part: feature:3540171-3540229:1:exon
so has part: feature:3540346-3540506:1:exon
so has part: feature:3541283-3541397:1:exon
so has part: feature:3541499-3541620:1:exon
so has part: feature:3544982-3545082:1:exon
so has part: feature:3556122-3556202:1:exon

XP_021077608.1
type: Protein
SIO_000068: ncbiprotein

position:3416395:1
position: 3416395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3416395-3416518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3437845-3437922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3444616-3444685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3445011-3445156:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3448423-3448560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3466604-3466686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3467090-3467276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3490678-3490817:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3492648-3492731:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3513056-3513145:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3540171-3540229:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3540346-3540506:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3541283-3541397:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3541499-3541620:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3544982-3545082:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3556122-3556202:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X2
translation: MEMQDLTSPHSRLSGSSESPSGPKLDSSHINSTSMTPNGTEVKTEPMSSSEIASTAADGSLDSFSGSALGSSSFSPRPAHPFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGVTSQAVTDPTAEYSTIHSPSTPIKESDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYSTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(3416395..3416518,3437845..3437922,3444616..3444685,3445011..3445156,3448438..3448560,3466604..3466686,3467090..3467276,3490678..3490817,3492648..3492731,3513056..3513145,3540171..3540229,3540346..3540506,3541283..3541397,3541499..3541620,3544982..3545082,3556122..3556202)
location: region:3416395-3556202:1
so has part: feature:3416395-3416518:1:exon
so has part: feature:3437845-3437922:1:exon
so has part: feature:3444616-3444685:1:exon
so has part: feature:3445011-3445156:1:exon
so has part: feature:3448438-3448560:1:exon
so has part: feature:3466604-3466686:1:exon
so has part: feature:3467090-3467276:1:exon
so has part: feature:3490678-3490817:1:exon
so has part: feature:3492648-3492731:1:exon
so has part: feature:3513056-3513145:1:exon
so has part: feature:3540171-3540229:1:exon
so has part: feature:3540346-3540506:1:exon
so has part: feature:3541283-3541397:1:exon
so has part: feature:3541499-3541620:1:exon
so has part: feature:3544982-3545082:1:exon
so has part: feature:3556122-3556202:1:exon

XP_021077610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3416395-3416518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3437845-3437922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3444616-3444685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3445011-3445156:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3448438-3448560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3466604-3466686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3467090-3467276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3490678-3490817:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3492648-3492731:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3513056-3513145:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3540171-3540229:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3540346-3540506:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3541283-3541397:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3541499-3541620:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3544982-3545082:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3556122-3556202:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X1
translation: MEMQDLTSPHSRLSGSSESPSGPKLDSSHINSTSMTPNGTEVKTEPMSSSEIASTAADGSLDSFSGSALGSSSFSPRPAHPFSPPQIYPSKPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGVTSQAVTDPTAEYSTIHSPSTPIKESDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYSTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(3416395..3416518,3437845..3437922,3444616..3444685,3445014..3445156,3448423..3448560,3466604..3466686,3467090..3467276,3490678..3490817,3492648..3492731,3513056..3513145,3540171..3540229,3540346..3540506,3541283..3541397,3541499..3541620,3544982..3545082,3556122..3556202)
location: region:3416395-3556202:1
so has part: feature:3416395-3416518:1:exon
so has part: feature:3437845-3437922:1:exon
so has part: feature:3444616-3444685:1:exon
so has part: feature:3445014-3445156:1:exon
so has part: feature:3448423-3448560:1:exon
so has part: feature:3466604-3466686:1:exon
so has part: feature:3467090-3467276:1:exon
so has part: feature:3490678-3490817:1:exon
so has part: feature:3492648-3492731:1:exon
so has part: feature:3513056-3513145:1:exon
so has part: feature:3540171-3540229:1:exon
so has part: feature:3540346-3540506:1:exon
so has part: feature:3541283-3541397:1:exon
so has part: feature:3541499-3541620:1:exon
so has part: feature:3544982-3545082:1:exon
so has part: feature:3556122-3556202:1:exon

XP_021077609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3416395-3416518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3437845-3437922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3444616-3444685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3445014-3445156:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3448423-3448560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3466604-3466686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3467090-3467276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3490678-3490817:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3492648-3492731:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3513056-3513145:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3540171-3540229:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3540346-3540506:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3541283-3541397:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3541499-3541620:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3544982-3545082:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3556122-3556202:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X3
translation: MEMQDLTSPHSRLSGSSESPSGPKLDSSHINSTSMTPNGTEVKTEPMSSSEIASTAADGSLDSFSGSALGSSSFSPRPAHPFSPPQIYPSKPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGVTSQAVTDPTAEYSTIHSPSTPIKESDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYSTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(3416395..3416518,3437845..3437922,3444616..3444685,3445014..3445156,3448438..3448560,3466604..3466686,3467090..3467276,3490678..3490817,3492648..3492731,3513056..3513145,3540171..3540229,3540346..3540506,3541283..3541397,3541499..3541620,3544982..3545082,3556122..3556202)
location: region:3416395-3556202:1
so has part: feature:3416395-3416518:1:exon
so has part: feature:3437845-3437922:1:exon
so has part: feature:3444616-3444685:1:exon
so has part: feature:3445014-3445156:1:exon
so has part: feature:3448438-3448560:1:exon
so has part: feature:3466604-3466686:1:exon
so has part: feature:3467090-3467276:1:exon
so has part: feature:3490678-3490817:1:exon
so has part: feature:3492648-3492731:1:exon
so has part: feature:3513056-3513145:1:exon
so has part: feature:3540171-3540229:1:exon
so has part: feature:3540346-3540506:1:exon
so has part: feature:3541283-3541397:1:exon
so has part: feature:3541499-3541620:1:exon
so has part: feature:3544982-3545082:1:exon
so has part: feature:3556122-3556202:1:exon

XP_021077611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3416395-3416518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3437845-3437922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3444616-3444685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3445014-3445156:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3448438-3448560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3466604-3466686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3467090-3467276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3490678-3490817:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3492648-3492731:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3513056-3513145:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3540171-3540229:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3540346-3540506:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3541283-3541397:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3541499-3541620:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3544982-3545082:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3556122-3556202:1:exon

Eya1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Eya1
product: EYA transcriptional coactivator and phosphatase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029533328.1
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(3444622..3444685,3445078..3445156,3448423..3448560,3466604..3466686,3467090..3467276,3490678..3490817,3492648..3492731,3513056..3513145,3540171..3540229,3540346..3540506,3541283..3541397,3541499..3541620,3544982..3545082,3556122..3558091)
location: region:3444622-3558091:1
so has part: feature:3444622-3444685:1:exon
so has part: feature:3445078-3445156:1:exon
so has part: feature:3448423-3448560:1:exon
so has part: feature:3466604-3466686:1:exon
so has part: feature:3467090-3467276:1:exon
so has part: feature:3490678-3490817:1:exon
so has part: feature:3492648-3492731:1:exon
so has part: feature:3513056-3513145:1:exon
so has part: feature:3540171-3540229:1:exon
so has part: feature:3540346-3540506:1:exon
so has part: feature:3541283-3541397:1:exon
so has part: feature:3541499-3541620:1:exon
so has part: feature:3544982-3545082:1:exon
so has part: feature:3556122-3558091:1:exon

position:3444622:1
position: 3444622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3444622-3444685:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3445078-3445156:1:exon

position:3445078:1
position: 3445078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3448423-3448560:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3466604-3466686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3467090-3467276:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3490678-3490817:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3492648-3492731:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3513056-3513145:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3540171-3540229:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3540346-3540506:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3541283-3541397:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3541499-3541620:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3544982-3545082:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3556122-3558091:1:exon

Eya1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Eya1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 1 isoform X6
translation: MQQATAYATYPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQGSSFTTSSGLYAGNNSLTNSSGFNSSQQDYPSYPGFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGVTSQAVTDPTAEYSTIHSPSTPIKESDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYSTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRVSSHSDLMALHHALELEYL
SIO_010081: Eya1
subclass of: SO_0000673
so part of: Eya1
location: join(3445090..3445156,3448423..3448560,3466604..3466686,3467090..3467276,3490678..3490817,3492648..3492731,3513056..3513145,3540171..3540229,3540346..3540506,3541283..3541397,3541499..3541620,3544982..3545082,3556122..3556202)
location: region:3445090-3556202:1
so has part: feature:3445090-3445156:1:exon
so has part: feature:3448423-3448560:1:exon
so has part: feature:3466604-3466686:1:exon
so has part: feature:3467090-3467276:1:exon
so has part: feature:3490678-3490817:1:exon
so has part: feature:3492648-3492731:1:exon
so has part: feature:3513056-3513145:1:exon
so has part: feature:3540171-3540229:1:exon
so has part: feature:3540346-3540506:1:exon
so has part: feature:3541283-3541397:1:exon
so has part: feature:3541499-3541620:1:exon
so has part: feature:3544982-3545082:1:exon
so has part: feature:3556122-3556202:1:exon

XP_029389188.1
type: Protein
SIO_000068: ncbiprotein

position:3445090:1
position: 3445090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3445090-3445156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3448423-3448560:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3466604-3466686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3467090-3467276:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3490678-3490817:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3492648-3492731:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3513056-3513145:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3540171-3540229:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3540346-3540506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3541283-3541397:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3541499-3541620:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3544982-3545082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3556122-3556202:1:exon

LOC110338990
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110338990
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3854412..3854821)
location: region:3854412-3854821:-1
so has part: feature:3854412-3854821:-1:exon

110338990
type: Gene
SIO_000068: ncbigene

position:3854412:-1
position: 3854412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3854821:-1
position: 3854821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3854412-3854821:-1:exon

LOC110338990
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338990
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110338990
subclass of: SO_0000673
so part of: LOC110338990
location: complement(3854412..3854821)
location: region:3854412-3854821:-1
so has part: feature:3854412-3854821:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3854412-3854821:-1:exon

LOC115063054
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115063054
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3909286..3909416
location: region:3909286-3909416:1
so has part: feature:3909286-3909416:1:exon
subclass of: SO_0000578

115063054
type: Gene
SIO_000068: ncbigene

position:3909286:1
position: 3909286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3909416:1
position: 3909416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3909286-3909416:1:exon

LOC115063054
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snoRNA
gene: LOC115063054
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842934.1
SIO_010081: LOC115063054
subclass of: SO_0000673
so part of: LOC115063054
location: 3909286..3909416
location: region:3909286-3909416:1
so has part: feature:3909286-3909416:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3909286-3909416:1:exon

LOC110339007
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110339007
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3920310..3928409)
location: region:3920310-3928409:-1
so has part: feature:3920310-3928409:-1:exon

110339007
type: Gene
SIO_000068: ncbigene

position:3920310:-1
position: 3920310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3928409:-1
position: 3928409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3920310-3928409:-1:exon

LOC110339007
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339007
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC110339007
subclass of: SO_0000673
so part of: LOC110339007
location: complement(3920310..3920325)
location: region:3920310-3920325:-1
so has part: feature:3920310-3920325:-1:exon

position:3920325:-1
position: 3920325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3920310-3920325:-1:exon

LOC110339007
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339007
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC110339007
subclass of: SO_0000673
so part of: LOC110339007
location: complement(3924427..3925366)
location: region:3924427-3925366:-1
so has part: feature:3924427-3925366:-1:exon

position:3924427:-1
position: 3924427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3925366:-1
position: 3925366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3924427-3925366:-1:exon

LOC110339007
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339007
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC110339007
subclass of: SO_0000673
so part of: LOC110339007
location: complement(3926743..3926807)
location: region:3926743-3926807:-1
so has part: feature:3926743-3926807:-1:exon

position:3926743:-1
position: 3926743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3926807:-1
position: 3926807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3926743-3926807:-1:exon

LOC110339007
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339007
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC110339007
subclass of: SO_0000673
so part of: LOC110339007
location: complement(3928394..3928409)
location: region:3928394-3928409:-1
so has part: feature:3928394-3928409:-1:exon

position:3928394:-1
position: 3928394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3928394-3928409:-1:exon

LOC110338861
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110338861
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3928996..3930732
location: region:3928996-3930732:1
so has part: feature:3928996-3930732:1:exon

110338861
type: Gene
SIO_000068: ncbigene

position:3928996:1
position: 3928996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3930732:1
position: 3930732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3928996-3930732:1:exon

LOC110338861
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 10093
gene: LOC110338861
product: recombining binding protein suppressor of hairless-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_002381317.1
SIO_010081: LOC110338861
so part of: LOC110338861
location: 3928996..3930732
location: region:3928996-3930732:1
so has part: feature:3928996-3930732:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3928996-3930732:1:exon

Xkr9
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Xkr9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3999841..4041644)
location: region:3999841-4041644:-1
so has part: feature:3999841-4041644:-1:exon
subclass of: SO_0000010

110338949
type: Gene
SIO_000068: ncbigene

position:3999841:-1
position: 3999841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4041644:-1
position: 4041644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3999841-4041644:-1:exon

Xkr9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Xkr9
product: XK related 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533379.1
SIO_010081: Xkr9
subclass of: SO_0000673
so part of: Xkr9
location: complement(join(3999841..4001999,4021410..4021630,4037605..4038241,4040370..4040427,4041550..4041635))
location: region:3999841-4041635:-1
so has part: feature:4041550-4041635:-1:exon
so has part: feature:4040370-4040427:-1:exon
so has part: feature:4037605-4038241:-1:exon
so has part: feature:4021410-4021630:-1:exon
so has part: feature:3999841-4001999:-1:exon

position:4041635:-1
position: 4041635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4041550-4041635:-1:exon

position:4041550:-1
position: 4041550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4040370-4040427:-1:exon

position:4040370:-1
position: 4040370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4040427:-1
position: 4040427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4037605-4038241:-1:exon

position:4037605:-1
position: 4037605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4038241:-1
position: 4038241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4021410-4021630:-1:exon

position:4021410:-1
position: 4021410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4021630:-1
position: 4021630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3999841-4001999:-1:exon

position:4001999:-1
position: 4001999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Xkr9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Xkr9
product: XK related 9, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533382.1
SIO_010081: Xkr9
subclass of: SO_0000673
so part of: Xkr9
location: complement(join(3999841..4001999,4021410..4021630,4041550..4041624))
location: region:3999841-4041624:-1
so has part: feature:4041550-4041624:-1:exon
so has part: feature:4021410-4021630:-1:exon
so has part: feature:3999841-4001999:-1:exon

position:4041624:-1
position: 4041624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4041550-4041624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4021410-4021630:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3999841-4001999:-1:exon

Xkr9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Xkr9
product: XK related 9, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533381.1
SIO_010081: Xkr9
subclass of: SO_0000673
so part of: Xkr9
location: complement(join(3999841..4001999,4021410..4021630,4037605..4038241,4041283..4041372))
location: region:3999841-4041372:-1
so has part: feature:4041283-4041372:-1:exon
so has part: feature:4037605-4038241:-1:exon
so has part: feature:4021410-4021630:-1:exon
so has part: feature:3999841-4001999:-1:exon

position:4041372:-1
position: 4041372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4041283-4041372:-1:exon

position:4041283:-1
position: 4041283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4037605-4038241:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4021410-4021630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3999841-4001999:-1:exon

Xkr9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Xkr9
product: XK related 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533380.1
SIO_010081: Xkr9
subclass of: SO_0000673
so part of: Xkr9
location: complement(join(3999841..4001999,4021410..4021630,4037605..4038241,4040370..4040427,4041283..4041372))
location: region:3999841-4041372:-1
so has part: feature:4041283-4041372:-1:exon
so has part: feature:4040370-4040427:-1:exon
so has part: feature:4037605-4038241:-1:exon
so has part: feature:4021410-4021630:-1:exon
so has part: feature:3999841-4001999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4041283-4041372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4040370-4040427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4037605-4038241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4021410-4021630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3999841-4001999:-1:exon

Xkr9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Xkr9
product: XK related 9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021222422.1
SIO_010081: Xkr9
subclass of: SO_0000673
so part of: Xkr9
location: complement(join(4001034..4001999,4021410..4021630,4037605..4038241,4041550..4041644))
location: region:4001034-4041644:-1
so has part: feature:4041550-4041644:-1:exon
so has part: feature:4037605-4038241:-1:exon
so has part: feature:4021410-4021630:-1:exon
so has part: feature:4001034-4001999:-1:exon

position:4001034:-1
position: 4001034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4041550-4041644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4037605-4038241:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4021410-4021630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4001034-4001999:-1:exon

Xkr9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Xkr9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 9 isoform X1
translation: MKYTKCNFMMSVLGIIIYVTDLVADIVLSVRYFHDGQYVFGVLTLSFVLCGTLIVHCFSYSWLKADLEKAGQENEHYFLLLHCLQGGVFTRYWFALRMGYHVVFKHSDRKSNFMEERTDPHKEAIDMATDLSMLRLFETYLEGCPQLILQLFAFLERGQANLSQCMVIFVSCCAISWSTVDYQIALRRSLPDKKPLGGLWPKVMYLFYKLFTLLSWMLSVVLLLFVDVRLALLLLLFLWIIGFIWAVINHTQFCNSVSMEFLYRIVVGFILVFTFFNIKGQNTKCPMSCYYTLRALGTLGILTVFWIYPLSIFNSDYFIPISATIVLALLLGIIFLGVYYGTFHPNRNVETQCDETDGKAPQRDCRIRYFLMD
SIO_010081: Xkr9
subclass of: SO_0000673
so part of: Xkr9
location: complement(join(4001371..4001999,4021410..4021630,4037605..4037876))
location: region:4001371-4037876:-1
so has part: feature:4037605-4037876:-1:exon
so has part: feature:4021410-4021630:-1:exon
so has part: feature:4001371-4001999:-1:exon

XP_021078081.1
type: Protein
SIO_000068: ncbiprotein

position:4001371:-1
position: 4001371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4037876:-1
position: 4037876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4037605-4037876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4021410-4021630:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4001371-4001999:-1:exon

Xkr9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Xkr9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 9 isoform X1
translation: MKYTKCNFMMSVLGIIIYVTDLVADIVLSVRYFHDGQYVFGVLTLSFVLCGTLIVHCFSYSWLKADLEKAGQENEHYFLLLHCLQGGVFTRYWFALRMGYHVVFKHSDRKSNFMEERTDPHKEAIDMATDLSMLRLFETYLEGCPQLILQLFAFLERGQANLSQCMVIFVSCCAISWSTVDYQIALRRSLPDKKPLGGLWPKVMYLFYKLFTLLSWMLSVVLLLFVDVRLALLLLLFLWIIGFIWAVINHTQFCNSVSMEFLYRIVVGFILVFTFFNIKGQNTKCPMSCYYTLRALGTLGILTVFWIYPLSIFNSDYFIPISATIVLALLLGIIFLGVYYGTFHPNRNVETQCDETDGKAPQRDCRIRYFLMD
SIO_010081: Xkr9
subclass of: SO_0000673
so part of: Xkr9
location: complement(join(4001371..4001999,4021410..4021630,4037605..4037876))
location: region:4001371-4037876:-1
so has part: feature:4037605-4037876:-1:exon
so has part: feature:4021410-4021630:-1:exon
so has part: feature:4001371-4001999:-1:exon

XP_029389239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4037605-4037876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4021410-4021630:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4001371-4001999:-1:exon

Xkr9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Xkr9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 9 isoform X1
translation: MKYTKCNFMMSVLGIIIYVTDLVADIVLSVRYFHDGQYVFGVLTLSFVLCGTLIVHCFSYSWLKADLEKAGQENEHYFLLLHCLQGGVFTRYWFALRMGYHVVFKHSDRKSNFMEERTDPHKEAIDMATDLSMLRLFETYLEGCPQLILQLFAFLERGQANLSQCMVIFVSCCAISWSTVDYQIALRRSLPDKKPLGGLWPKVMYLFYKLFTLLSWMLSVVLLLFVDVRLALLLLLFLWIIGFIWAVINHTQFCNSVSMEFLYRIVVGFILVFTFFNIKGQNTKCPMSCYYTLRALGTLGILTVFWIYPLSIFNSDYFIPISATIVLALLLGIIFLGVYYGTFHPNRNVETQCDETDGKAPQRDCRIRYFLMD
SIO_010081: Xkr9
subclass of: SO_0000673
so part of: Xkr9
location: complement(join(4001371..4001999,4021410..4021630,4037605..4037876))
location: region:4001371-4037876:-1
so has part: feature:4037605-4037876:-1:exon
so has part: feature:4021410-4021630:-1:exon
so has part: feature:4001371-4001999:-1:exon

XP_029389240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4037605-4037876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4021410-4021630:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4001371-4001999:-1:exon

Xkr9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Xkr9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 9 isoform X1
translation: MKYTKCNFMMSVLGIIIYVTDLVADIVLSVRYFHDGQYVFGVLTLSFVLCGTLIVHCFSYSWLKADLEKAGQENEHYFLLLHCLQGGVFTRYWFALRMGYHVVFKHSDRKSNFMEERTDPHKEAIDMATDLSMLRLFETYLEGCPQLILQLFAFLERGQANLSQCMVIFVSCCAISWSTVDYQIALRRSLPDKKPLGGLWPKVMYLFYKLFTLLSWMLSVVLLLFVDVRLALLLLLFLWIIGFIWAVINHTQFCNSVSMEFLYRIVVGFILVFTFFNIKGQNTKCPMSCYYTLRALGTLGILTVFWIYPLSIFNSDYFIPISATIVLALLLGIIFLGVYYGTFHPNRNVETQCDETDGKAPQRDCRIRYFLMD
SIO_010081: Xkr9
subclass of: SO_0000673
so part of: Xkr9
location: complement(join(4001371..4001999,4021410..4021630,4037605..4037876))
location: region:4001371-4037876:-1
so has part: feature:4037605-4037876:-1:exon
so has part: feature:4021410-4021630:-1:exon
so has part: feature:4001371-4001999:-1:exon

XP_029389241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4037605-4037876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4021410-4021630:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4001371-4001999:-1:exon

Xkr9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Xkr9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 9 isoform X2
translation: MGYHVVFKHSDRKSNFMEERTDPHKEAIDMATDLSMLRLFETYLEGCPQLILQLFAFLERGQANLSQCMVIFVSCCAISWSTVDYQIALRRSLPDKKPLGGLWPKVMYLFYKLFTLLSWMLSVVLLLFVDVRLALLLLLFLWIIGFIWAVINHTQFCNSVSMEFLYRIVVGFILVFTFFNIKGQNTKCPMSCYYTLRALGTLGILTVFWIYPLSIFNSDYFIPISATIVLALLLGIIFLGVYYGTFHPNRNVETQCDETDGKAPQRDCRIRYFLMD
SIO_010081: Xkr9
subclass of: SO_0000673
so part of: Xkr9
location: complement(join(4001371..4001999,4021410..4021611))
location: region:4001371-4021611:-1
so has part: feature:4021410-4021611:-1:exon
so has part: feature:4001371-4001999:-1:exon

XP_029389242.1
type: Protein
SIO_000068: ncbiprotein

position:4021611:-1
position: 4021611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4021410-4021611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4001371-4001999:-1:exon

Lactb2
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Lactb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4049473..4083195
location: region:4049473-4083195:1
so has part: feature:4049473-4083195:1:exon
subclass of: SO_0000010

110338864
type: Gene
SIO_000068: ncbigene

position:4049473:1
position: 4049473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4083195:1
position: 4083195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4049473-4083195:1:exon

Lactb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Lactb2
product: lactamase beta 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021222331.2
SIO_010081: Lactb2
subclass of: SO_0000673
so part of: Lactb2
location: join(4049473..4049661,4058697..4058860,4061593..4061719,4071160..4071338,4079448..4079596,4082187..4082268,4082772..4083195)
location: region:4049473-4083195:1
so has part: feature:4049473-4049661:1:exon
so has part: feature:4058697-4058860:1:exon
so has part: feature:4061593-4061719:1:exon
so has part: feature:4071160-4071338:1:exon
so has part: feature:4079448-4079596:1:exon
so has part: feature:4082187-4082268:1:exon
so has part: feature:4082772-4083195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4049473-4049661:1:exon

position:4049661:1
position: 4049661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4058697-4058860:1:exon

position:4058697:1
position: 4058697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4058860:1
position: 4058860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4061593-4061719:1:exon

position:4061593:1
position: 4061593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4061719:1
position: 4061719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4071160-4071338:1:exon

position:4071160:1
position: 4071160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4071338:1
position: 4071338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4079448-4079596:1:exon

position:4079448:1
position: 4079448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4079596:1
position: 4079596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4082187-4082268:1:exon

position:4082187:1
position: 4082187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4082268:1
position: 4082268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4082772-4083195:1:exon

position:4082772:1
position: 4082772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Lactb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Lactb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoribonuclease LACTB2
translation: MAAALQRIEQLSSRVVRVLGCNPGPMTLQGTNTYLVGTGSRRILIDTGEPSIPEYISCLKQALVEFDTAIQEILVTHWHSDHSGGIVDICKNINNDTTYCIKKLRRNPQKEEIIGNGEQQYIYIENGDVVKTEGATLRVLYTPGHTDDHMALLLEEENAIFSGDCILGEGTTVFEDLYDYMNSLNDLLKVKADIIYPGHGPVIHNAEAKILEYISHRNNREEQIISLFRDNFEKSFTVAELRTMIYKNVPENLHKMAERNLLLHLKKLEKDGKIFYTSPVKKWKAVL
SIO_010081: Lactb2
subclass of: SO_0000673
so part of: Lactb2
location: join(4049540..4049661,4058697..4058860,4061593..4061719,4071160..4071338,4079448..4079596,4082187..4082268,4082772..4082812)
location: region:4049540-4082812:1
so has part: feature:4049540-4049661:1:exon
so has part: feature:4058697-4058860:1:exon
so has part: feature:4061593-4061719:1:exon
so has part: feature:4071160-4071338:1:exon
so has part: feature:4079448-4079596:1:exon
so has part: feature:4082187-4082268:1:exon
so has part: feature:4082772-4082812:1:exon

XP_021077990.1
type: Protein
SIO_000068: ncbiprotein

position:4049540:1
position: 4049540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4082812:1
position: 4082812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4049540-4049661:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4058697-4058860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4061593-4061719:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4071160-4071338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4079448-4079596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4082187-4082268:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4082772-4082812:1:exon

Tram1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Tram1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4113060..4138211
location: region:4113060-4138211:1
so has part: feature:4113060-4138211:1:exon
subclass of: SO_0000010

110338700
type: Gene
SIO_000068: ncbigene

position:4113060:1
position: 4113060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4138211:1
position: 4138211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4113060-4138211:1:exon

Tram1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Tram1
product: translocation associated membrane protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021222102.1
SIO_010081: Tram1
subclass of: SO_0000673
so part of: Tram1
location: join(4113060..4113342,4122161..4122224,4123440..4123561,4123686..4123802,4125065..4125123,4126771..4126855,4132418..4132488,4132584..4132688,4134392..4134535,4134847..4135007,4138026..4138211)
location: region:4113060-4138211:1
so has part: feature:4113060-4113342:1:exon
so has part: feature:4122161-4122224:1:exon
so has part: feature:4123440-4123561:1:exon
so has part: feature:4123686-4123802:1:exon
so has part: feature:4125065-4125123:1:exon
so has part: feature:4126771-4126855:1:exon
so has part: feature:4132418-4132488:1:exon
so has part: feature:4132584-4132688:1:exon
so has part: feature:4134392-4134535:1:exon
so has part: feature:4134847-4135007:1:exon
so has part: feature:4138026-4138211:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4113060-4113342:1:exon

position:4113342:1
position: 4113342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4122161-4122224:1:exon

position:4122161:1
position: 4122161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4122224:1
position: 4122224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4123440-4123561:1:exon

position:4123440:1
position: 4123440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4123561:1
position: 4123561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4123686-4123802:1:exon

position:4123686:1
position: 4123686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4123802:1
position: 4123802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4125065-4125123:1:exon

position:4125065:1
position: 4125065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4125123:1
position: 4125123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4126771-4126855:1:exon

position:4126771:1
position: 4126771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4126855:1
position: 4126855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4132418-4132488:1:exon

position:4132418:1
position: 4132418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4132488:1
position: 4132488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4132584-4132688:1:exon

position:4132584:1
position: 4132584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4132688:1
position: 4132688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4134392-4134535:1:exon

position:4134392:1
position: 4134392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4134535:1
position: 4134535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4134847-4135007:1:exon

position:4134847:1
position: 4134847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4135007:1
position: 4135007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4138026-4138211:1:exon

position:4138026:1
position: 4138026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tram1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Tram1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocating chain-associated membrane protein 1
translation: MAIRKKSNKNPPLLSHEFVLQNHADIVSCLAMLFLLGLMFEITAKAAIIFVALQYNVTRPATEEQATESASLYQYGIKDLATVFFYMLVAIIIHAIIQEYVLDKINRRMHFSKTKHSKFNESGQLSAFYLFACVWGTFILISENYISDPTILWRAYPHNLMTFQMKFFYISQLAYWLHAFPELYFQKTKKEDIPRQLVYIGLYLFHIAGAYLLNLNHLGLVLLVLHYFVEFLFHISRLFYFSDEKYQKGFSLWAVLFVLGRLLTLILSVLTVGFGLARAENQKLDFSTGNFNVLAVRIAVLASICITQAFMMWKFINFQLRRWREHSAFQAPPVKRKPAVTKGRSSRKGTENGVNGTVTSNGADSPRNRKEKSS
SIO_010081: Tram1
subclass of: SO_0000673
so part of: Tram1
location: join(4113220..4113342,4122161..4122224,4123440..4123561,4123686..4123802,4125065..4125123,4126771..4126855,4132418..4132488,4132584..4132688,4134392..4134535,4134847..4135007,4138026..4138099)
location: region:4113220-4138099:1
so has part: feature:4113220-4113342:1:exon
so has part: feature:4122161-4122224:1:exon
so has part: feature:4123440-4123561:1:exon
so has part: feature:4123686-4123802:1:exon
so has part: feature:4125065-4125123:1:exon
so has part: feature:4126771-4126855:1:exon
so has part: feature:4132418-4132488:1:exon
so has part: feature:4132584-4132688:1:exon
so has part: feature:4134392-4134535:1:exon
so has part: feature:4134847-4135007:1:exon
so has part: feature:4138026-4138099:1:exon

XP_021077761.1
type: Protein
SIO_000068: ncbiprotein

position:4113220:1
position: 4113220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4138099:1
position: 4138099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4113220-4113342:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4122161-4122224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4123440-4123561:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4123686-4123802:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4125065-4125123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4126771-4126855:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4132418-4132488:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4132584-4132688:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4134392-4134535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4134847-4135007:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4138026-4138099:1:exon

LOC110338952
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110338952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4252990..4253291)
location: region:4252990-4253291:-1
so has part: feature:4252990-4253291:-1:exon

110338952
type: Gene
SIO_000068: ncbigene

position:4252990:-1
position: 4252990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4253291:-1
position: 4253291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4252990-4253291:-1:exon

LOC110338952
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338952
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110338952
subclass of: SO_0000673
so part of: LOC110338952
location: complement(4252990..4253291)
location: region:4252990-4253291:-1
so has part: feature:4252990-4253291:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4252990-4253291:-1:exon

LOC110338939
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110338939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4290553..4291006)
location: region:4290553-4291006:-1
so has part: feature:4290553-4291006:-1:exon

110338939
type: Gene
SIO_000068: ncbigene

position:4290553:-1
position: 4290553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4291006:-1
position: 4291006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4290553-4291006:-1:exon

LOC110338939
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338939
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110338939
subclass of: SO_0000673
so part of: LOC110338939
location: complement(4290553..4291006)
location: region:4290553-4291006:-1
so has part: feature:4290553-4291006:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4290553-4291006:-1:exon

LOC115062997
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062997
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 4309188..4309286
location: region:4309188-4309286:1
so has part: feature:4309188-4309286:1:exon

115062997
type: Gene
SIO_000068: ncbigene

position:4309188:1
position: 4309188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4309286:1
position: 4309286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4309188-4309286:1:exon

LOC115062997
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC115062997
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00561
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC115062997
subclass of: SO_0000673
so part of: LOC115062997
location: 4309188..4309286
location: region:4309188-4309286:1
so has part: feature:4309188-4309286:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4309188-4309286:1:exon

Ncoa2
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Ncoa2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4311419..4552234
location: region:4311419-4552234:1
so has part: feature:4311419-4552234:1:exon
subclass of: SO_0000010

110338922
type: Gene
SIO_000068: ncbigene

position:4311419:1
position: 4311419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4552234:1
position: 4552234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4311419-4552234:1:exon

Ncoa2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ncoa2
product: nuclear receptor coactivator 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021222395.1
SIO_010081: Ncoa2
subclass of: SO_0000673
so part of: Ncoa2
location: join(4311419..4311564,4399851..4399907,4466182..4466286,4469853..4470025,4497695..4497798,4500988..4501165,4503755..4503943,4507050..4507151,4507732..4507875,4512414..4512561,4514241..4515510,4521778..4521991,4523623..4523829,4526426..4526641,4528803..4528932,4533587..4533752,4537208..4537486,4537848..4537925,4539354..4539588,4541527..4541704,4542353..4542551,4544384..4544473,4548521..4552234)
location: region:4311419-4552234:1
so has part: feature:4311419-4311564:1:exon
so has part: feature:4399851-4399907:1:exon
so has part: feature:4466182-4466286:1:exon
so has part: feature:4469853-4470025:1:exon
so has part: feature:4497695-4497798:1:exon
so has part: feature:4500988-4501165:1:exon
so has part: feature:4503755-4503943:1:exon
so has part: feature:4507050-4507151:1:exon
so has part: feature:4507732-4507875:1:exon
so has part: feature:4512414-4512561:1:exon
so has part: feature:4514241-4515510:1:exon
so has part: feature:4521778-4521991:1:exon
so has part: feature:4523623-4523829:1:exon
so has part: feature:4526426-4526641:1:exon
so has part: feature:4528803-4528932:1:exon
so has part: feature:4533587-4533752:1:exon
so has part: feature:4537208-4537486:1:exon
so has part: feature:4537848-4537925:1:exon
so has part: feature:4539354-4539588:1:exon
so has part: feature:4541527-4541704:1:exon
so has part: feature:4542353-4542551:1:exon
so has part: feature:4544384-4544473:1:exon
so has part: feature:4548521-4552234:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4311419-4311564:1:exon

position:4311564:1
position: 4311564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4399851-4399907:1:exon

position:4399851:1
position: 4399851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4399907:1
position: 4399907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4466182-4466286:1:exon

position:4466182:1
position: 4466182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4466286:1
position: 4466286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4469853-4470025:1:exon

position:4469853:1
position: 4469853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4470025:1
position: 4470025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4497695-4497798:1:exon

position:4497695:1
position: 4497695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4497798:1
position: 4497798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4500988-4501165:1:exon

position:4500988:1
position: 4500988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4501165:1
position: 4501165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4503755-4503943:1:exon

position:4503755:1
position: 4503755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4503943:1
position: 4503943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4507050-4507151:1:exon

position:4507050:1
position: 4507050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4507151:1
position: 4507151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4507732-4507875:1:exon

position:4507732:1
position: 4507732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4507875:1
position: 4507875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4512414-4512561:1:exon

position:4512414:1
position: 4512414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4512561:1
position: 4512561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4514241-4515510:1:exon

position:4514241:1
position: 4514241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4515510:1
position: 4515510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4521778-4521991:1:exon

position:4521778:1
position: 4521778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4521991:1
position: 4521991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4523623-4523829:1:exon

position:4523623:1
position: 4523623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4523829:1
position: 4523829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4526426-4526641:1:exon

position:4526426:1
position: 4526426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4526641:1
position: 4526641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4528803-4528932:1:exon

position:4528803:1
position: 4528803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4528932:1
position: 4528932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4533587-4533752:1:exon

position:4533587:1
position: 4533587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4533752:1
position: 4533752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4537208-4537486:1:exon

position:4537208:1
position: 4537208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4537486:1
position: 4537486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4537848-4537925:1:exon

position:4537848:1
position: 4537848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4537925:1
position: 4537925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4539354-4539588:1:exon

position:4539354:1
position: 4539354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4539588:1
position: 4539588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4541527-4541704:1:exon

position:4541527:1
position: 4541527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4541704:1
position: 4541704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4542353-4542551:1:exon

position:4542353:1
position: 4542353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4542551:1
position: 4542551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4544384-4544473:1:exon

position:4544384:1
position: 4544384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4544473:1
position: 4544473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4548521-4552234:1:exon

position:4548521:1
position: 4548521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ncoa2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ncoa2
product: nuclear receptor coactivator 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021222396.2
SIO_010081: Ncoa2
subclass of: SO_0000673
so part of: Ncoa2
location: join(4313030..4313299,4399851..4399907,4466182..4466286,4469853..4470025,4497695..4497798,4500988..4501165,4503755..4503943,4507050..4507151,4507732..4507875,4512414..4512561,4514241..4515510,4521778..4521991,4526426..4526641,4528803..4528932,4533587..4533752,4537208..4537486,4537848..4537925,4539354..4539588,4541527..4541704,4542353..4542551,4544384..4544473,4548521..4552234)
location: region:4313030-4552234:1
so has part: feature:4313030-4313299:1:exon
so has part: feature:4399851-4399907:1:exon
so has part: feature:4466182-4466286:1:exon
so has part: feature:4469853-4470025:1:exon
so has part: feature:4497695-4497798:1:exon
so has part: feature:4500988-4501165:1:exon
so has part: feature:4503755-4503943:1:exon
so has part: feature:4507050-4507151:1:exon
so has part: feature:4507732-4507875:1:exon
so has part: feature:4512414-4512561:1:exon
so has part: feature:4514241-4515510:1:exon
so has part: feature:4521778-4521991:1:exon
so has part: feature:4526426-4526641:1:exon
so has part: feature:4528803-4528932:1:exon
so has part: feature:4533587-4533752:1:exon
so has part: feature:4537208-4537486:1:exon
so has part: feature:4537848-4537925:1:exon
so has part: feature:4539354-4539588:1:exon
so has part: feature:4541527-4541704:1:exon
so has part: feature:4542353-4542551:1:exon
so has part: feature:4544384-4544473:1:exon
so has part: feature:4548521-4552234:1:exon

position:4313030:1
position: 4313030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4313030-4313299:1:exon

position:4313299:1
position: 4313299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4399851-4399907:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4466182-4466286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4469853-4470025:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4497695-4497798:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4500988-4501165:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4503755-4503943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4507050-4507151:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4507732-4507875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4512414-4512561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4514241-4515510:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4521778-4521991:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4526426-4526641:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4528803-4528932:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4533587-4533752:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4537208-4537486:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4537848-4537925:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4539354-4539588:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4541527-4541704:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4542353-4542551:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4544384-4544473:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4548521-4552234:1:exon

LOC115063018
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115063018
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4351201..4351305
location: region:4351201-4351305:1
so has part: feature:4351201-4351305:1:exon
subclass of: SO_0000623

115063018
type: Gene
SIO_000068: ncbigene

position:4351201:1
position: 4351201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4351305:1
position: 4351305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4351201-4351305:1:exon

LOC115063018
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snRNA
gene: LOC115063018
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842901.1
SIO_010081: LOC115063018
subclass of: SO_0000673
so part of: LOC115063018
location: 4351201..4351305
location: region:4351201-4351305:1
so has part: feature:4351201-4351305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4351201-4351305:1:exon

LOC110338923
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110338923
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4366844..4367037)
location: region:4366844-4367037:-1
so has part: feature:4366844-4367037:-1:exon

110338923
type: Gene
SIO_000068: ncbigene

position:4366844:-1
position: 4366844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4367037:-1
position: 4367037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4366844-4367037:-1:exon

LOC110338923
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338923
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC110338923
subclass of: SO_0000673
so part of: LOC110338923
location: complement(4366844..4367037)
location: region:4366844-4367037:-1
so has part: feature:4366844-4367037:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4366844-4367037:-1:exon

Ncoa2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ncoa2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 2 isoform X1
translation: MSGMGENTSDPSRAETRKRKECPDQLGPSPKRSTEKRNREQENKYIEELAELIFANFNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLLPKSMVNGGSWSGDPPRRNSHTFNCRMLVKPLPDSEEEGHDSQEAHQKYEAMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERPALPSSESFTTRQDLQGKITSLDTSTMRAAMKPGWEDLVRRCIQKFHTQHEGESLSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLIRSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQAMGKPLNPISSSSPAHQALCGGNPGQDMTLGSNINFPMNGPKEQMGMPMGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPGMNPGQASSVLSPRQRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNALQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGTTGQAEASCHPEEQKGPNDSSMPQAASGDRAEGHSRLHDSKGQTKLLQLLTTKSDQMEPSPLPSSLSDTNKDSTGSLPGPGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKELSQESSSTAPGSEVTVKQEPASPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPASNTKLIAMKTVKEEVSFEPSDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPTGSVDKQAIINDLMQLTADSSPVPPAAGAQKAALRMSQSTFNNPRPGQLGRLLPNQNLPLDITLQSPTGAGPFPPIRNSSPYSVIPQPGMMGTQGMLGSQGTLGNNSTGMIGSSTSRPSMPSGEWAPQSPAVRVTCAATTGAMNRPVQGGMIRNPTASIPMRANSQPGQRQMLQSQVMNIGPSELEMTMGGPQYNQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDEGALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQEPGVMLEQKPSVFPQQYASQAQMAQGGYNPMQDPNFHTMGQRPNYTTLRMQPRPGLRPTGIVQNQPNQLRLQLQHRLQAQQNRQPLMNQISSVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQQVQRGTLMMRGQGLNMTPSMVAPTGLPAAMNNPRIPQANAQQFPFPPNYGISQQPDPGFTGATTPQSPLMSPRMAHTQSPMMQQSQANPAYQPTSDMNGWAQGSMGGNSMFAQQSPPHFGQQANTSMYSNNMNISVSMATNTGGLSSMNQMTGQMSMTSVTSVPTSGLPSMGPEQVNDPALRGGNLFPNQLPGMDMIKQEGDASRKYC
SIO_010081: Ncoa2
subclass of: SO_0000673
so part of: Ncoa2
location: join(4466201..4466286,4469853..4470025,4497695..4497798,4500988..4501165,4503755..4503943,4507050..4507151,4507732..4507875,4512414..4512561,4514241..4515510,4521778..4521991,4523623..4523829,4526426..4526641,4528803..4528932,4533587..4533752,4537208..4537486,4537848..4537925,4539354..4539588,4541527..4541704,4542353..4542551,4544384..4544473,4548521..4548532)
location: region:4466201-4548532:1
so has part: feature:4466201-4466286:1:exon
so has part: feature:4469853-4470025:1:exon
so has part: feature:4497695-4497798:1:exon
so has part: feature:4500988-4501165:1:exon
so has part: feature:4503755-4503943:1:exon
so has part: feature:4507050-4507151:1:exon
so has part: feature:4507732-4507875:1:exon
so has part: feature:4512414-4512561:1:exon
so has part: feature:4514241-4515510:1:exon
so has part: feature:4521778-4521991:1:exon
so has part: feature:4523623-4523829:1:exon
so has part: feature:4526426-4526641:1:exon
so has part: feature:4528803-4528932:1:exon
so has part: feature:4533587-4533752:1:exon
so has part: feature:4537208-4537486:1:exon
so has part: feature:4537848-4537925:1:exon
so has part: feature:4539354-4539588:1:exon
so has part: feature:4541527-4541704:1:exon
so has part: feature:4542353-4542551:1:exon
so has part: feature:4544384-4544473:1:exon
so has part: feature:4548521-4548532:1:exon

XP_021078054.1
type: Protein
SIO_000068: ncbiprotein

position:4466201:1
position: 4466201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4548532:1
position: 4548532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4466201-4466286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4469853-4470025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4497695-4497798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4500988-4501165:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4503755-4503943:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4507050-4507151:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4507732-4507875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4512414-4512561:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4514241-4515510:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4521778-4521991:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4523623-4523829:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4526426-4526641:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4528803-4528932:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4533587-4533752:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4537208-4537486:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4537848-4537925:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4539354-4539588:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4541527-4541704:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4542353-4542551:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4544384-4544473:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4548521-4548532:1:exon

Ncoa2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ncoa2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 2 isoform X2
translation: MSGMGENTSDPSRAETRKRKECPDQLGPSPKRSTEKRNREQENKYIEELAELIFANFNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLLPKSMVNGGSWSGDPPRRNSHTFNCRMLVKPLPDSEEEGHDSQEAHQKYEAMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERPALPSSESFTTRQDLQGKITSLDTSTMRAAMKPGWEDLVRRCIQKFHTQHEGESLSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLIRSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQAMGKPLNPISSSSPAHQALCGGNPGQDMTLGSNINFPMNGPKEQMGMPMGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPGMNPGQASSVLSPRQRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNALQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGTTGQAEASCHPEEQKGPNDSSMPQAASGDRAEGHSRLHDSKGQTKLLQLLTTKSDQMEPSPLPSSLSDTNKDSTGSLPGPGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKELSQESSSTAPGSEVTVKQEPASPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPASNTKLIAMKTVKEEVSFEPSDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPTGSVDKQAIINDLMQLTADSSPVPPAAGAQKAALRMSQSRMIGSSTSRPSMPSGEWAPQSPAVRVTCAATTGAMNRPVQGGMIRNPTASIPMRANSQPGQRQMLQSQVMNIGPSELEMTMGGPQYNQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDEGALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQEPGVMLEQKPSVFPQQYASQAQMAQGGYNPMQDPNFHTMGQRPNYTTLRMQPRPGLRPTGIVQNQPNQLRLQLQHRLQAQQNRQPLMNQISSVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQQVQRGTLMMRGQGLNMTPSMVAPTGLPAAMNNPRIPQANAQQFPFPPNYGISQQPDPGFTGATTPQSPLMSPRMAHTQSPMMQQSQANPAYQPTSDMNGWAQGSMGGNSMFAQQSPPHFGQQANTSMYSNNMNISVSMATNTGGLSSMNQMTGQMSMTSVTSVPTSGLPSMGPEQVNDPALRGGNLFPNQLPGMDMIKQEGDASRKYC
SIO_010081: Ncoa2
subclass of: SO_0000673
so part of: Ncoa2
location: join(4466201..4466286,4469853..4470025,4497695..4497798,4500988..4501165,4503755..4503943,4507050..4507151,4507732..4507875,4512414..4512561,4514241..4515510,4521778..4521991,4526426..4526641,4528803..4528932,4533587..4533752,4537208..4537486,4537848..4537925,4539354..4539588,4541527..4541704,4542353..4542551,4544384..4544473,4548521..4548532)
location: region:4466201-4548532:1
so has part: feature:4466201-4466286:1:exon
so has part: feature:4469853-4470025:1:exon
so has part: feature:4497695-4497798:1:exon
so has part: feature:4500988-4501165:1:exon
so has part: feature:4503755-4503943:1:exon
so has part: feature:4507050-4507151:1:exon
so has part: feature:4507732-4507875:1:exon
so has part: feature:4512414-4512561:1:exon
so has part: feature:4514241-4515510:1:exon
so has part: feature:4521778-4521991:1:exon
so has part: feature:4526426-4526641:1:exon
so has part: feature:4528803-4528932:1:exon
so has part: feature:4533587-4533752:1:exon
so has part: feature:4537208-4537486:1:exon
so has part: feature:4537848-4537925:1:exon
so has part: feature:4539354-4539588:1:exon
so has part: feature:4541527-4541704:1:exon
so has part: feature:4542353-4542551:1:exon
so has part: feature:4544384-4544473:1:exon
so has part: feature:4548521-4548532:1:exon

XP_021078055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4466201-4466286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4469853-4470025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4497695-4497798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4500988-4501165:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4503755-4503943:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4507050-4507151:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4507732-4507875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4512414-4512561:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4514241-4515510:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4521778-4521991:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4526426-4526641:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4528803-4528932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4533587-4533752:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4537208-4537486:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4537848-4537925:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4539354-4539588:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4541527-4541704:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4542353-4542551:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4544384-4544473:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4548521-4548532:1:exon

Prdm14
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Prdm14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4565448..4579236
location: region:4565448-4579236:1
so has part: feature:4565448-4579236:1:exon
subclass of: SO_0000010

110338947
type: Gene
SIO_000068: ncbigene

position:4565448:1
position: 4565448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4579236:1
position: 4579236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4565448-4579236:1:exon

Prdm14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Prdm14
product: PR/SET domain 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 Proteins
transcript id: XM_021222421.1
SIO_010081: Prdm14
subclass of: SO_0000673
so part of: Prdm14
location: join(4565448..4565501,4566739..4567411,4567910..4567963,4568062..4568219,4569606..4569876,4574666..4574868,4577464..4577565,4578174..4579236)
location: region:4565448-4579236:1
so has part: feature:4565448-4565501:1:exon
so has part: feature:4566739-4567411:1:exon
so has part: feature:4567910-4567963:1:exon
so has part: feature:4568062-4568219:1:exon
so has part: feature:4569606-4569876:1:exon
so has part: feature:4574666-4574868:1:exon
so has part: feature:4577464-4577565:1:exon
so has part: feature:4578174-4579236:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4565448-4565501:1:exon

position:4565501:1
position: 4565501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4566739-4567411:1:exon

position:4566739:1
position: 4566739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4567411:1
position: 4567411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4567910-4567963:1:exon

position:4567910:1
position: 4567910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4567963:1
position: 4567963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4568062-4568219:1:exon

position:4568062:1
position: 4568062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4568219:1
position: 4568219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4569606-4569876:1:exon

position:4569606:1
position: 4569606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4569876:1
position: 4569876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4574666-4574868:1:exon

position:4574666:1
position: 4574666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4574868:1
position: 4574868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4577464-4577565:1:exon

position:4577464:1
position: 4577464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4577565:1
position: 4577565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4578174-4579236:1:exon

position:4578174:1
position: 4578174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Prdm14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Prdm14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 14
translation: MALPPSGVTQDKANYLPQSNPHHLTAYYAHAPGYSHFRNLATTTEEDFQPWKLAAAVLESQAMAPLSAFRMTAPLLNPGLAVQSDLPWYKLSPWNRIPQSTPEVPRFLDSTEHRSSGSSSQNLVPSGGGQISAQWWGAENLLLPSPVIASLLPAGIKKPQSISVSQTLNQEGKPPFCGFNFTEEELRFVLYGAIASPEHPDELQHAISGILVPTESSGSNHLHKTLDKDSLQLPEGLCLMQTAFGDVPHFGVFCSDFIAKGVRFGPFRGRVVNASEVKAHRDNSRMWEIFEDGHLSHFIDGKGSGNWMSYVNCARFPKEQNLLAVQHQGQIFYESCRDIHQNQELLVWYGNGYEKFLDVPMSLRVTEQEGKQLSESSEESAEGYRCDRCGKVFTYKYYRDKHLKFTPCVDKGDRKFPCSLCQRSFEKRDRLRIHILHVHERHRPYLCSTCGKSFSQSSSLNKHMRVHSGDRPYQCVYCTKKFTASSILRTHIRQHSGERPFKCKHCGKAFASHAAHDSHVRRSHKENGRSSCSICGKGFLDQEAFYAHMRLHKTC
SIO_010081: Prdm14
subclass of: SO_0000673
so part of: Prdm14
location: join(4566760..4567411,4567910..4567963,4568062..4568219,4569606..4569876,4574666..4574868,4577464..4577565,4578174..4578401)
location: region:4566760-4578401:1
so has part: feature:4566760-4567411:1:exon
so has part: feature:4567910-4567963:1:exon
so has part: feature:4568062-4568219:1:exon
so has part: feature:4569606-4569876:1:exon
so has part: feature:4574666-4574868:1:exon
so has part: feature:4577464-4577565:1:exon
so has part: feature:4578174-4578401:1:exon

XP_021078080.1
type: Protein
SIO_000068: ncbiprotein

position:4566760:1
position: 4566760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4578401:1
position: 4578401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4566760-4567411:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4567910-4567963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4568062-4568219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4569606-4569876:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4574666-4574868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4577464-4577565:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4578174-4578401:1:exon

Slco5a1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Slco5a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4716110..4829916
location: region:4716110-4829916:1
so has part: feature:4716110-4829916:1:exon
subclass of: SO_0000010

110338764
type: Gene
SIO_000068: ncbigene

position:4716110:1
position: 4716110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4829916:1
position: 4829916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4716110-4829916:1:exon

Slco5a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Slco5a1
product: solute carrier organic anion transporter family member 5A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021222197.2
SIO_010081: Slco5a1
subclass of: SO_0000673
so part of: Slco5a1
location: join(4716110..4716289,4717828..4719212,4764807..4764939,4770200..4770411,4786634..4786798,4803035..4803233,4814241..4814400,4816274..4816515,4819380..4819444,4824264..4829916)
location: region:4716110-4829916:1
so has part: feature:4716110-4716289:1:exon
so has part: feature:4717828-4719212:1:exon
so has part: feature:4764807-4764939:1:exon
so has part: feature:4770200-4770411:1:exon
so has part: feature:4786634-4786798:1:exon
so has part: feature:4803035-4803233:1:exon
so has part: feature:4814241-4814400:1:exon
so has part: feature:4816274-4816515:1:exon
so has part: feature:4819380-4819444:1:exon
so has part: feature:4824264-4829916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4716110-4716289:1:exon

position:4716289:1
position: 4716289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4717828-4719212:1:exon

position:4717828:1
position: 4717828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4719212:1
position: 4719212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4764807-4764939:1:exon

position:4764807:1
position: 4764807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4764939:1
position: 4764939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4770200-4770411:1:exon

position:4770200:1
position: 4770200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4770411:1
position: 4770411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4786634-4786798:1:exon

position:4786634:1
position: 4786634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4786798:1
position: 4786798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4803035-4803233:1:exon

position:4803035:1
position: 4803035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4803233:1
position: 4803233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4814241-4814400:1:exon

position:4814241:1
position: 4814241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4814400:1
position: 4814400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4816274-4816515:1:exon

position:4816274:1
position: 4816274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4816515:1
position: 4816515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4819380-4819444:1:exon

position:4819380:1
position: 4819380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4819444:1
position: 4819444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4824264-4829916:1:exon

position:4824264:1
position: 4824264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slco5a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Slco5a1
product: solute carrier organic anion transporter family member 5A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021222198.2
SIO_010081: Slco5a1
subclass of: SO_0000673
so part of: Slco5a1
location: join(4716110..4716289,4717828..4719212,4764807..4764939,4770200..4770411,4803035..4803233,4814241..4814400,4816274..4816515,4819380..4819444,4824264..4829916)
location: region:4716110-4829916:1
so has part: feature:4716110-4716289:1:exon
so has part: feature:4717828-4719212:1:exon
so has part: feature:4764807-4764939:1:exon
so has part: feature:4770200-4770411:1:exon
so has part: feature:4803035-4803233:1:exon
so has part: feature:4814241-4814400:1:exon
so has part: feature:4816274-4816515:1:exon
so has part: feature:4819380-4819444:1:exon
so has part: feature:4824264-4829916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4716110-4716289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4717828-4719212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4764807-4764939:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4770200-4770411:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4803035-4803233:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4814241-4814400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4816274-4816515:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4819380-4819444:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4824264-4829916:1:exon

Slco5a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Slco5a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier organic anion transporter family member 5A1 isoform X1
translation: MDEGDAQSPAQEQLEAPSSVGAVQEKCEPESFRSKSLPALHSASCRQNFSAGNADGKLASGCNEAPGCQEKHLGRNLIVPSPSAPSTSAGTTTELMDCNHRMDPSKTVSVSSTLATLQERRCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERRYSLKSSESGLLVSCFDIGNLVVVVFVSYFGGRGRRPLWLAVGGLLIAIGAALFALPHFISPPYQIQELNASASNDGLCQNGNSTAILEPPPCPKDSGGNSHWIYVALFVCAQVLIGMGSTPIYTLGPTYLDDNVKKDNASLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQSDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKFSADVVIDDDIIKEKSNTSEQMNKKVSSMGFGKNVRDLPRAAVRILSNMTFLFVSLSYTAESAIVTAFITFIPKFIESQFGIPASNASIYTGVIIVPSAGVGIVLGGYIIKKLKLGARESAKLAMICSGVSLLCFSTLFIVGCESINLGGINIPYTTGPSLTMPHRNLTGSCNVNCGCKIHEYEPVCGSDGITYFNPCLAGCVNSGNLTTGVRNYTECTCVQSRQVITPPTVGQRSQLRVVIVKTYLNENGYAVSGKCKRTCNTLIPFLVFLFIVTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLRTLAYIPTPIYFGAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYFGLAAGLKFVGFIFIFLAWYSIKYKEDGLQRRRCREFPLSTVSEQVGGPSKAEKYSRTTSCPAFSTQGEVHEETALQKGFPCTTKTYPGPFSEAGSSSADFGRDESPGAAL
SIO_010081: Slco5a1
subclass of: SO_0000673
so part of: Slco5a1
location: join(4718297..4719212,4764807..4764939,4770200..4770411,4786634..4786798,4803035..4803233,4814241..4814400,4816274..4816515,4819380..4819444,4824264..4824724)
location: region:4718297-4824724:1
so has part: feature:4718297-4719212:1:exon
so has part: feature:4764807-4764939:1:exon
so has part: feature:4770200-4770411:1:exon
so has part: feature:4786634-4786798:1:exon
so has part: feature:4803035-4803233:1:exon
so has part: feature:4814241-4814400:1:exon
so has part: feature:4816274-4816515:1:exon
so has part: feature:4819380-4819444:1:exon
so has part: feature:4824264-4824724:1:exon

XP_021077856.1
type: Protein
SIO_000068: ncbiprotein

position:4718297:1
position: 4718297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4824724:1
position: 4824724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4718297-4719212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4764807-4764939:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4770200-4770411:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4786634-4786798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4803035-4803233:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4814241-4814400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4816274-4816515:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4819380-4819444:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4824264-4824724:1:exon

Slco5a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Slco5a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier organic anion transporter family member 5A1 isoform X2
translation: MDEGDAQSPAQEQLEAPSSVGAVQEKCEPESFRSKSLPALHSASCRQNFSAGNADGKLASGCNEAPGCQEKHLGRNLIVPSPSAPSTSAGTTTELMDCNHRMDPSKTVSVSSTLATLQERRCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERRYSLKSSESGLLVSCFDIGNLVVVVFVSYFGGRGRRPLWLAVGGLLIAIGAALFALPHFISPPYQIQELNASASNDGLCQNGNSTAILEPPPCPKDSGGNSHWIYVALFVCAQVLIGMGSTPIYTLGPTYLDDNVKKDNASLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQSDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKFSADVVIDDDIIKEKSNTSEQMNKKVSSMGFGKNVRGVIIVPSAGVGIVLGGYIIKKLKLGARESAKLAMICSGVSLLCFSTLFIVGCESINLGGINIPYTTGPSLTMPHRNLTGSCNVNCGCKIHEYEPVCGSDGITYFNPCLAGCVNSGNLTTGVRNYTECTCVQSRQVITPPTVGQRSQLRVVIVKTYLNENGYAVSGKCKRTCNTLIPFLVFLFIVTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLRTLAYIPTPIYFGAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYFGLAAGLKFVGFIFIFLAWYSIKYKEDGLQRRRCREFPLSTVSEQVGGPSKAEKYSRTTSCPAFSTQGEVHEETALQKGFPCTTKTYPGPFSEAGSSSADFGRDESPGAAL
SIO_010081: Slco5a1
subclass of: SO_0000673
so part of: Slco5a1
location: join(4718297..4719212,4764807..4764939,4770200..4770411,4803035..4803233,4814241..4814400,4816274..4816515,4819380..4819444,4824264..4824724)
location: region:4718297-4824724:1
so has part: feature:4718297-4719212:1:exon
so has part: feature:4764807-4764939:1:exon
so has part: feature:4770200-4770411:1:exon
so has part: feature:4803035-4803233:1:exon
so has part: feature:4814241-4814400:1:exon
so has part: feature:4816274-4816515:1:exon
so has part: feature:4819380-4819444:1:exon
so has part: feature:4824264-4824724:1:exon

XP_021077857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4718297-4719212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4764807-4764939:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4770200-4770411:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4803035-4803233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4814241-4814400:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4816274-4816515:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4819380-4819444:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4824264-4824724:1:exon

LOC115063004
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115063004
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(4734949..4735060)
location: region:4734949-4735060:-1
so has part: feature:4734949-4735060:-1:exon

115063004
type: Gene
SIO_000068: ncbigene

position:4734949:-1
position: 4734949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4735060:-1
position: 4735060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4734949-4735060:-1:exon

LOC115063004
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC115063004
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC115063004
subclass of: SO_0000673
so part of: LOC115063004
location: complement(4734949..4735060)
location: region:4734949-4735060:-1
so has part: feature:4734949-4735060:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4734949-4735060:-1:exon

Sulf1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Sulf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4836003..4999121)
location: region:4836003-4999121:-1
so has part: feature:4836003-4999121:-1:exon
subclass of: SO_0000010

110338634
type: Gene
SIO_000068: ncbigene

position:4836003:-1
position: 4836003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4999121:-1
position: 4999121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4836003-4999121:-1:exon

Sulf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Sulf1
product: sulfatase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021221956.1
SIO_010081: Sulf1
subclass of: SO_0000673
so part of: Sulf1
location: complement(join(4836003..4837548,4846081..4846114,4848442..4848565,4848659..4848801,4853725..4853900,4855123..4855188,4855967..4856061,4856891..4856987,4858716..4858968,4861014..4861230,4872432..4872561,4873676..4873732,4874004..4874132,4875945..4876120,4877015..4877165,4886583..4886752,4889269..4889420,4896031..4896270,4906390..4906613,4906931..4907003,4998786..4999121))
location: region:4836003-4999121:-1
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so has part: feature:4846081-4846114:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:4998786-4999121:-1:exon

position:4998786:-1
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urn:…
SIO_000300: 2
SIO_000628: feature:4906931-4907003:-1:exon

position:4906931:-1
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position:4907003:-1
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urn:…
SIO_000300: 3
SIO_000628: feature:4906390-4906613:-1:exon

position:4906390:-1
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position:4906613:-1
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urn:…
SIO_000300: 4
SIO_000628: feature:4896031-4896270:-1:exon

position:4896031:-1
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position:4896270:-1
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urn:…
SIO_000300: 5
SIO_000628: feature:4889269-4889420:-1:exon

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urn:…
SIO_000300: 6
SIO_000628: feature:4886583-4886752:-1:exon

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urn:…
SIO_000300: 7
SIO_000628: feature:4877015-4877165:-1:exon

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urn:…
SIO_000300: 8
SIO_000628: feature:4875945-4876120:-1:exon

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urn:…
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
SIO_000628: feature:4872432-4872561:-1:exon

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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:4858716-4858968:-1:exon

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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:4853725-4853900:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:4848659-4848801:-1:exon

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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:4836003-4837548:-1:exon

position:4837548:-1
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reference: sequence
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Sulf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Sulf1
product: sulfatase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021221957.1
SIO_010081: Sulf1
subclass of: SO_0000673
so part of: Sulf1
location: complement(join(4836003..4837548,4846081..4846114,4848442..4848565,4848659..4848801,4853725..4853900,4855123..4855188,4855967..4856061,4856891..4856987,4858716..4858968,4861014..4861230,4872432..4872561,4873676..4873732,4874004..4874132,4875945..4876120,4877015..4877165,4886583..4886752,4889269..4889420,4896031..4896270,4906390..4906613,4906931..4907003,4962175..4962269,4998786..4999121))
location: region:4836003-4999121:-1
so has part: feature:4998786-4999121:-1:exon
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so has part: feature:4858716-4858968:-1:exon
so has part: feature:4856891-4856987:-1:exon
so has part: feature:4855967-4856061:-1:exon
so has part: feature:4855123-4855188:-1:exon
so has part: feature:4853725-4853900:-1:exon
so has part: feature:4848659-4848801:-1:exon
so has part: feature:4848442-4848565:-1:exon
so has part: feature:4846081-4846114:-1:exon
so has part: feature:4836003-4837548:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4998786-4999121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4962175-4962269:-1:exon

position:4962175:-1
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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:4906931-4907003:-1:exon

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SIO_000300: 4
SIO_000628: feature:4906390-4906613:-1:exon

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SIO_000300: 6
SIO_000628: feature:4889269-4889420:-1:exon

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SIO_000300: 7
SIO_000628: feature:4886583-4886752:-1:exon

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SIO_000300: 8
SIO_000628: feature:4877015-4877165:-1:exon

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SIO_000628: feature:4875945-4876120:-1:exon

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SIO_000628: feature:4874004-4874132:-1:exon

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SIO_000300: 11
SIO_000628: feature:4873676-4873732:-1:exon

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SIO_000300: 12
SIO_000628: feature:4872432-4872561:-1:exon

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SIO_000628: feature:4861014-4861230:-1:exon

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SIO_000300: 14
SIO_000628: feature:4858716-4858968:-1:exon

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SIO_000300: 15
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SIO_000300: 16
SIO_000628: feature:4855967-4856061:-1:exon

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SIO_000300: 17
SIO_000628: feature:4855123-4855188:-1:exon

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SIO_000300: 18
SIO_000628: feature:4853725-4853900:-1:exon

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SIO_000300: 19
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SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:4836003-4837548:-1:exon

Sulf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Sulf1
product: sulfatase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021221955.2
SIO_010081: Sulf1
subclass of: SO_0000673
so part of: Sulf1
location: complement(join(4836003..4837548,4846081..4846114,4848442..4848565,4848659..4848801,4853725..4853900,4855123..4855188,4855967..4856061,4856891..4856987,4858716..4858968,4861014..4861230,4872432..4872561,4873676..4873732,4874004..4874132,4875945..4876120,4877015..4877165,4886583..4886752,4889269..4889420,4896031..4896270,4906390..4906613,4906931..4907003,4962175..4962269,4971539..4971899))
location: region:4836003-4971899:-1
so has part: feature:4971539-4971899:-1:exon
so has part: feature:4962175-4962269:-1:exon
so has part: feature:4906931-4907003:-1:exon
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so has part: feature:4848659-4848801:-1:exon
so has part: feature:4848442-4848565:-1:exon
so has part: feature:4846081-4846114:-1:exon
so has part: feature:4836003-4837548:-1:exon

position:4971899:-1
position: 4971899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4971539-4971899:-1:exon

position:4971539:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:4962175-4962269:-1:exon

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SIO_000628: feature:4906390-4906613:-1:exon

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SIO_000300: 9
SIO_000628: feature:4875945-4876120:-1:exon

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SIO_000628: feature:4874004-4874132:-1:exon

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SIO_000300: 11
SIO_000628: feature:4873676-4873732:-1:exon

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SIO_000300: 12
SIO_000628: feature:4872432-4872561:-1:exon

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SIO_000300: 13
SIO_000628: feature:4861014-4861230:-1:exon

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SIO_000300: 14
SIO_000628: feature:4858716-4858968:-1:exon

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SIO_000300: 15
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SIO_000300: 16
SIO_000628: feature:4855967-4856061:-1:exon

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SIO_000300: 17
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SIO_000628: feature:4853725-4853900:-1:exon

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SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:4836003-4837548:-1:exon

Sulf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Sulf1
product: sulfatase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533299.1
SIO_010081: Sulf1
subclass of: SO_0000673
so part of: Sulf1
location: complement(join(4837421..4837548,4846081..4846114,4848442..4848565,4848659..4848801,4853725..4853900,4855123..4855188,4855967..4856061,4856891..4856987,4858716..4858968,4861014..4861230,4872432..4872561,4873676..4873732,4874004..4874132,4875945..4876120,4877015..4877165,4886583..4886752,4889269..4889420,4896031..4896270,4906390..4906613,4906931..4907003,4971539..4971899))
location: region:4837421-4971899:-1
so has part: feature:4971539-4971899:-1:exon
so has part: feature:4906931-4907003:-1:exon
so has part: feature:4906390-4906613:-1:exon
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so has part: feature:4848442-4848565:-1:exon
so has part: feature:4846081-4846114:-1:exon
so has part: feature:4837421-4837548:-1:exon

position:4837421:-1
position: 4837421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4971539-4971899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4906931-4907003:-1:exon

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SIO_000300: 3
SIO_000628: feature:4906390-4906613:-1:exon

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SIO_000628: feature:4896031-4896270:-1:exon

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SIO_000628: feature:4873676-4873732:-1:exon

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SIO_000628: feature:4872432-4872561:-1:exon

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SIO_000300: 12
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SIO_000300: 13
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SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:4853725-4853900:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4848659-4848801:-1:exon

urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:4837421-4837548:-1:exon

Sulf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Sulf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extracellular sulfatase Sulf-1
translation: MKYSCWALLLAVLGTQLLGSLSSTVRSQRFRGRIQQERKNIRPNIILVLTDDQDVELGSLQVMNKTRKIMEHGGATFTNAFVTTPMCCPSRSSMLTGKYVHNHNVYTNNENCSSPSWQAMHEPRTFAVYLNNTGYRTAFFGKYLNEYNGSYIPPGWREWLGLIKNSRFYNYTVCRNGIKEKHGFDYAKDYFTDLITNESINYFKMSKRMYPHRPIMMVISHAAPHGPEDSAPQFSKLYPNASQHITPSYNYAPNMDKHWIMQYTGPMLPIHMEFTNVLQRKRLQTLMSVDDSVERLYNMLVETGELDNTYIIYTADHGYHIGQFGLVKGKSMPYDFDIRVPFFIRGPSIEPGSIVPQIVLNIDLAPTILDIAGLDTPSDVDGKSVLKLLDLEKPGNRFRTNKKAKIWRDTFLVERGKFLRKKEESGKNIQQSNHLPKYERVKELCQQARYQTACEQPGQNWQCIEDTSGKLRIHKCKGPSDLLTVRQNARNLYSRGLHDKDKECHCRDSGYRSSRSQRKNQRQLLRNQGTPKYKPRFVHTRQTRSLSVEFEGEIYDINLEEEELQVLPPRSIAKRHDEGHQGFGGHQAAAGDIRNEMLADSNNAVGLPATVRVTHKCFILPNDTIHCERELYQSARAWKDHKAYIDKEIEVLQDKIKNLREVRGHLKKRKPEECSCGDQSYYNKEKGVKRQEKLKSHLHPFKEAAAQDVDSKLQLFKEHRRRKKERKEKKRQRKGEECSLPGLTCFTHDNNHWQTAPFWNLGSFCACTSSNNNTYWCLRTVNETHNFLFCEFATGFLEYFDMNTDPYQLTNTVHTVERSILNQLHIQLMELRSCQGYKQCNPRPKSLDIGAKEGGNYDPHRGQLWDGWEG
SIO_010081: Sulf1
subclass of: SO_0000673
so part of: Sulf1
location: complement(join(4837518..4837548,4846081..4846114,4848442..4848565,4848659..4848801,4853725..4853900,4855123..4855188,4855967..4856061,4856891..4856987,4858716..4858968,4861014..4861230,4872432..4872561,4873676..4873732,4874004..4874132,4875945..4876120,4877015..4877165,4886583..4886752,4889269..4889420,4896031..4896270,4906390..4906561))
location: region:4837518-4906561:-1
so has part: feature:4906390-4906561:-1:exon
so has part: feature:4896031-4896270:-1:exon
so has part: feature:4889269-4889420:-1:exon
so has part: feature:4886583-4886752:-1:exon
so has part: feature:4877015-4877165:-1:exon
so has part: feature:4875945-4876120:-1:exon
so has part: feature:4874004-4874132:-1:exon
so has part: feature:4873676-4873732:-1:exon
so has part: feature:4872432-4872561:-1:exon
so has part: feature:4861014-4861230:-1:exon
so has part: feature:4858716-4858968:-1:exon
so has part: feature:4856891-4856987:-1:exon
so has part: feature:4855967-4856061:-1:exon
so has part: feature:4855123-4855188:-1:exon
so has part: feature:4853725-4853900:-1:exon
so has part: feature:4848659-4848801:-1:exon
so has part: feature:4848442-4848565:-1:exon
so has part: feature:4846081-4846114:-1:exon
so has part: feature:4837518-4837548:-1:exon

XP_021077614.1
type: Protein
SIO_000068: ncbiprotein

position:4837518:-1
position: 4837518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4906561:-1
position: 4906561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4906390-4906561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4896031-4896270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4889269-4889420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4886583-4886752:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4877015-4877165:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4875945-4876120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4874004-4874132:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4873676-4873732:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4872432-4872561:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4861014-4861230:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4858716-4858968:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4856891-4856987:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4855967-4856061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4855123-4855188:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4853725-4853900:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4848659-4848801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4848442-4848565:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4846081-4846114:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4837518-4837548:-1:exon

Sulf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Sulf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extracellular sulfatase Sulf-1
translation: MKYSCWALLLAVLGTQLLGSLSSTVRSQRFRGRIQQERKNIRPNIILVLTDDQDVELGSLQVMNKTRKIMEHGGATFTNAFVTTPMCCPSRSSMLTGKYVHNHNVYTNNENCSSPSWQAMHEPRTFAVYLNNTGYRTAFFGKYLNEYNGSYIPPGWREWLGLIKNSRFYNYTVCRNGIKEKHGFDYAKDYFTDLITNESINYFKMSKRMYPHRPIMMVISHAAPHGPEDSAPQFSKLYPNASQHITPSYNYAPNMDKHWIMQYTGPMLPIHMEFTNVLQRKRLQTLMSVDDSVERLYNMLVETGELDNTYIIYTADHGYHIGQFGLVKGKSMPYDFDIRVPFFIRGPSIEPGSIVPQIVLNIDLAPTILDIAGLDTPSDVDGKSVLKLLDLEKPGNRFRTNKKAKIWRDTFLVERGKFLRKKEESGKNIQQSNHLPKYERVKELCQQARYQTACEQPGQNWQCIEDTSGKLRIHKCKGPSDLLTVRQNARNLYSRGLHDKDKECHCRDSGYRSSRSQRKNQRQLLRNQGTPKYKPRFVHTRQTRSLSVEFEGEIYDINLEEEELQVLPPRSIAKRHDEGHQGFGGHQAAAGDIRNEMLADSNNAVGLPATVRVTHKCFILPNDTIHCERELYQSARAWKDHKAYIDKEIEVLQDKIKNLREVRGHLKKRKPEECSCGDQSYYNKEKGVKRQEKLKSHLHPFKEAAAQDVDSKLQLFKEHRRRKKERKEKKRQRKGEECSLPGLTCFTHDNNHWQTAPFWNLGSFCACTSSNNNTYWCLRTVNETHNFLFCEFATGFLEYFDMNTDPYQLTNTVHTVERSILNQLHIQLMELRSCQGYKQCNPRPKSLDIGAKEGGNYDPHRGQLWDGWEG
SIO_010081: Sulf1
subclass of: SO_0000673
so part of: Sulf1
location: complement(join(4837518..4837548,4846081..4846114,4848442..4848565,4848659..4848801,4853725..4853900,4855123..4855188,4855967..4856061,4856891..4856987,4858716..4858968,4861014..4861230,4872432..4872561,4873676..4873732,4874004..4874132,4875945..4876120,4877015..4877165,4886583..4886752,4889269..4889420,4896031..4896270,4906390..4906561))
location: region:4837518-4906561:-1
so has part: feature:4906390-4906561:-1:exon
so has part: feature:4896031-4896270:-1:exon
so has part: feature:4889269-4889420:-1:exon
so has part: feature:4886583-4886752:-1:exon
so has part: feature:4877015-4877165:-1:exon
so has part: feature:4875945-4876120:-1:exon
so has part: feature:4874004-4874132:-1:exon
so has part: feature:4873676-4873732:-1:exon
so has part: feature:4872432-4872561:-1:exon
so has part: feature:4861014-4861230:-1:exon
so has part: feature:4858716-4858968:-1:exon
so has part: feature:4856891-4856987:-1:exon
so has part: feature:4855967-4856061:-1:exon
so has part: feature:4855123-4855188:-1:exon
so has part: feature:4853725-4853900:-1:exon
so has part: feature:4848659-4848801:-1:exon
so has part: feature:4848442-4848565:-1:exon
so has part: feature:4846081-4846114:-1:exon
so has part: feature:4837518-4837548:-1:exon

XP_021077615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4906390-4906561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4896031-4896270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4889269-4889420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4886583-4886752:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4877015-4877165:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4875945-4876120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4874004-4874132:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4873676-4873732:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4872432-4872561:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4861014-4861230:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4858716-4858968:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4856891-4856987:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4855967-4856061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4855123-4855188:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4853725-4853900:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4848659-4848801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4848442-4848565:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4846081-4846114:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4837518-4837548:-1:exon

Sulf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Sulf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extracellular sulfatase Sulf-1
translation: MKYSCWALLLAVLGTQLLGSLSSTVRSQRFRGRIQQERKNIRPNIILVLTDDQDVELGSLQVMNKTRKIMEHGGATFTNAFVTTPMCCPSRSSMLTGKYVHNHNVYTNNENCSSPSWQAMHEPRTFAVYLNNTGYRTAFFGKYLNEYNGSYIPPGWREWLGLIKNSRFYNYTVCRNGIKEKHGFDYAKDYFTDLITNESINYFKMSKRMYPHRPIMMVISHAAPHGPEDSAPQFSKLYPNASQHITPSYNYAPNMDKHWIMQYTGPMLPIHMEFTNVLQRKRLQTLMSVDDSVERLYNMLVETGELDNTYIIYTADHGYHIGQFGLVKGKSMPYDFDIRVPFFIRGPSIEPGSIVPQIVLNIDLAPTILDIAGLDTPSDVDGKSVLKLLDLEKPGNRFRTNKKAKIWRDTFLVERGKFLRKKEESGKNIQQSNHLPKYERVKELCQQARYQTACEQPGQNWQCIEDTSGKLRIHKCKGPSDLLTVRQNARNLYSRGLHDKDKECHCRDSGYRSSRSQRKNQRQLLRNQGTPKYKPRFVHTRQTRSLSVEFEGEIYDINLEEEELQVLPPRSIAKRHDEGHQGFGGHQAAAGDIRNEMLADSNNAVGLPATVRVTHKCFILPNDTIHCERELYQSARAWKDHKAYIDKEIEVLQDKIKNLREVRGHLKKRKPEECSCGDQSYYNKEKGVKRQEKLKSHLHPFKEAAAQDVDSKLQLFKEHRRRKKERKEKKRQRKGEECSLPGLTCFTHDNNHWQTAPFWNLGSFCACTSSNNNTYWCLRTVNETHNFLFCEFATGFLEYFDMNTDPYQLTNTVHTVERSILNQLHIQLMELRSCQGYKQCNPRPKSLDIGAKEGGNYDPHRGQLWDGWEG
SIO_010081: Sulf1
subclass of: SO_0000673
so part of: Sulf1
location: complement(join(4837518..4837548,4846081..4846114,4848442..4848565,4848659..4848801,4853725..4853900,4855123..4855188,4855967..4856061,4856891..4856987,4858716..4858968,4861014..4861230,4872432..4872561,4873676..4873732,4874004..4874132,4875945..4876120,4877015..4877165,4886583..4886752,4889269..4889420,4896031..4896270,4906390..4906561))
location: region:4837518-4906561:-1
so has part: feature:4906390-4906561:-1:exon
so has part: feature:4896031-4896270:-1:exon
so has part: feature:4889269-4889420:-1:exon
so has part: feature:4886583-4886752:-1:exon
so has part: feature:4877015-4877165:-1:exon
so has part: feature:4875945-4876120:-1:exon
so has part: feature:4874004-4874132:-1:exon
so has part: feature:4873676-4873732:-1:exon
so has part: feature:4872432-4872561:-1:exon
so has part: feature:4861014-4861230:-1:exon
so has part: feature:4858716-4858968:-1:exon
so has part: feature:4856891-4856987:-1:exon
so has part: feature:4855967-4856061:-1:exon
so has part: feature:4855123-4855188:-1:exon
so has part: feature:4853725-4853900:-1:exon
so has part: feature:4848659-4848801:-1:exon
so has part: feature:4848442-4848565:-1:exon
so has part: feature:4846081-4846114:-1:exon
so has part: feature:4837518-4837548:-1:exon

XP_021077616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4906390-4906561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4896031-4896270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4889269-4889420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4886583-4886752:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4877015-4877165:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4875945-4876120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4874004-4874132:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4873676-4873732:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4872432-4872561:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4861014-4861230:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4858716-4858968:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4856891-4856987:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4855967-4856061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4855123-4855188:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4853725-4853900:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4848659-4848801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4848442-4848565:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4846081-4846114:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4837518-4837548:-1:exon

Sulf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Sulf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extracellular sulfatase Sulf-1
translation: MKYSCWALLLAVLGTQLLGSLSSTVRSQRFRGRIQQERKNIRPNIILVLTDDQDVELGSLQVMNKTRKIMEHGGATFTNAFVTTPMCCPSRSSMLTGKYVHNHNVYTNNENCSSPSWQAMHEPRTFAVYLNNTGYRTAFFGKYLNEYNGSYIPPGWREWLGLIKNSRFYNYTVCRNGIKEKHGFDYAKDYFTDLITNESINYFKMSKRMYPHRPIMMVISHAAPHGPEDSAPQFSKLYPNASQHITPSYNYAPNMDKHWIMQYTGPMLPIHMEFTNVLQRKRLQTLMSVDDSVERLYNMLVETGELDNTYIIYTADHGYHIGQFGLVKGKSMPYDFDIRVPFFIRGPSIEPGSIVPQIVLNIDLAPTILDIAGLDTPSDVDGKSVLKLLDLEKPGNRFRTNKKAKIWRDTFLVERGKFLRKKEESGKNIQQSNHLPKYERVKELCQQARYQTACEQPGQNWQCIEDTSGKLRIHKCKGPSDLLTVRQNARNLYSRGLHDKDKECHCRDSGYRSSRSQRKNQRQLLRNQGTPKYKPRFVHTRQTRSLSVEFEGEIYDINLEEEELQVLPPRSIAKRHDEGHQGFGGHQAAAGDIRNEMLADSNNAVGLPATVRVTHKCFILPNDTIHCERELYQSARAWKDHKAYIDKEIEVLQDKIKNLREVRGHLKKRKPEECSCGDQSYYNKEKGVKRQEKLKSHLHPFKEAAAQDVDSKLQLFKEHRRRKKERKEKKRQRKGEECSLPGLTCFTHDNNHWQTAPFWNLGSFCACTSSNNNTYWCLRTVNETHNFLFCEFATGFLEYFDMNTDPYQLTNTVHTVERSILNQLHIQLMELRSCQGYKQCNPRPKSLDIGAKEGGNYDPHRGQLWDGWEG
SIO_010081: Sulf1
subclass of: SO_0000673
so part of: Sulf1
location: complement(join(4837518..4837548,4846081..4846114,4848442..4848565,4848659..4848801,4853725..4853900,4855123..4855188,4855967..4856061,4856891..4856987,4858716..4858968,4861014..4861230,4872432..4872561,4873676..4873732,4874004..4874132,4875945..4876120,4877015..4877165,4886583..4886752,4889269..4889420,4896031..4896270,4906390..4906561))
location: region:4837518-4906561:-1
so has part: feature:4906390-4906561:-1:exon
so has part: feature:4896031-4896270:-1:exon
so has part: feature:4889269-4889420:-1:exon
so has part: feature:4886583-4886752:-1:exon
so has part: feature:4877015-4877165:-1:exon
so has part: feature:4875945-4876120:-1:exon
so has part: feature:4874004-4874132:-1:exon
so has part: feature:4873676-4873732:-1:exon
so has part: feature:4872432-4872561:-1:exon
so has part: feature:4861014-4861230:-1:exon
so has part: feature:4858716-4858968:-1:exon
so has part: feature:4856891-4856987:-1:exon
so has part: feature:4855967-4856061:-1:exon
so has part: feature:4855123-4855188:-1:exon
so has part: feature:4853725-4853900:-1:exon
so has part: feature:4848659-4848801:-1:exon
so has part: feature:4848442-4848565:-1:exon
so has part: feature:4846081-4846114:-1:exon
so has part: feature:4837518-4837548:-1:exon

XP_029389159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4906390-4906561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4896031-4896270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4889269-4889420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4886583-4886752:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4877015-4877165:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4875945-4876120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4874004-4874132:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4873676-4873732:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4872432-4872561:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4861014-4861230:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4858716-4858968:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4856891-4856987:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4855967-4856061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4855123-4855188:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4853725-4853900:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4848659-4848801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4848442-4848565:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4846081-4846114:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4837518-4837548:-1:exon

LOC110339008
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110339008
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5032899..5033638)
location: region:5032899-5033638:-1
so has part: feature:5032899-5033638:-1:exon

110339008
type: Gene
SIO_000068: ncbigene

position:5032899:-1
position: 5032899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5033638:-1
position: 5033638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5032899-5033638:-1:exon

LOC110339008
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110339008
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC110339008
subclass of: SO_0000673
so part of: LOC110339008
location: complement(5032899..5033638)
location: region:5032899-5033638:-1
so has part: feature:5032899-5033638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5032899-5033638:-1:exon

LOC110339009
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110339009
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5265698..5266401)
location: region:5265698-5266401:-1
so has part: feature:5265698-5266401:-1:exon

110339009
type: Gene
SIO_000068: ncbigene

position:5265698:-1
position: 5265698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5266401:-1
position: 5266401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5265698-5266401:-1:exon

LOC110339009
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 10093
gene: LOC110339009
product: immunoglobulin kappa variable 4-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 50 Proteins
pseudo: true
transcript id: XR_002381321.1
SIO_010081: LOC110339009
so part of: LOC110339009
location: complement(join(5265698..5266128,5266332..5266401))
location: region:5265698-5266401:-1
so has part: feature:5266332-5266401:-1:exon
so has part: feature:5265698-5266128:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5266332-5266401:-1:exon

position:5266332:-1
position: 5266332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5265698-5266128:-1:exon

position:5266128:-1
position: 5266128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115062928
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5658884..5696484)
location: region:5658884-5696484:-1
so has part: feature:5658884-5696484:-1:exon
subclass of: SO_0000011

115062928
type: Gene
SIO_000068: ncbigene

position:5658884:-1
position: 5658884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5696484:-1
position: 5696484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5658884-5696484:-1:exon

LOC115062928
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: lncRNA
gene: LOC115062928
product: uncharacterized LOC115062928
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003842832.1
SIO_010081: LOC115062928
subclass of: SO_0000673
so part of: LOC115062928
location: complement(join(5658884..5659154,5664289..5664345,5683827..5683920,5696455..5696484))
location: region:5658884-5696484:-1
so has part: feature:5696455-5696484:-1:exon
so has part: feature:5683827-5683920:-1:exon
so has part: feature:5664289-5664345:-1:exon
so has part: feature:5658884-5659154:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5696455-5696484:-1:exon

position:5696455:-1
position: 5696455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5683827-5683920:-1:exon

position:5683827:-1
position: 5683827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5683920:-1
position: 5683920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5664289-5664345:-1:exon

position:5664289:-1
position: 5664289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5664345:-1
position: 5664345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5658884-5659154:-1:exon

position:5659154:-1
position: 5659154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115062985
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5779569..5856456)
location: region:5779569-5856456:-1
so has part: feature:5779569-5856456:-1:exon
subclass of: SO_0000010

115062985
type: Gene
SIO_000068: ncbigene

position:5779569:-1
position: 5779569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5856456:-1
position: 5856456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5779569-5856456:-1:exon

LOC115062985
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: LOC115062985
product: uncharacterized protein C8orf34 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029533449.1
SIO_010081: LOC115062985
subclass of: SO_0000673
so part of: LOC115062985
location: complement(join(5779569..5779706,5788516..5788592,5809536..5809621,5854441..5854616,5856370..5856456))
location: region:5779569-5856456:-1
so has part: feature:5856370-5856456:-1:exon
so has part: feature:5854441-5854616:-1:exon
so has part: feature:5809536-5809621:-1:exon
so has part: feature:5788516-5788592:-1:exon
so has part: feature:5779569-5779706:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5856370-5856456:-1:exon

position:5856370:-1
position: 5856370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5854441-5854616:-1:exon

position:5854441:-1
position: 5854441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5854616:-1
position: 5854616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5809536-5809621:-1:exon

position:5809536:-1
position: 5809536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5809621:-1
position: 5809621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5788516-5788592:-1:exon

position:5788516:-1
position: 5788516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5788592:-1
position: 5788592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5779569-5779706:-1:exon

position:5779706:-1
position: 5779706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115062985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: LOC115062985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf34 homolog
translation: MDPGRKRVLGLFPSMLEVFLCEKSFLTSNQELILSVTVCVVSEDLDDLRMEGVTTLVLSGSKFNQGRPTHPAEPQAKVTLNICSRCARLQGDNLMERTEDTPQILHSPDEIIPDSLDSLPGTEETLMEEGEDFEKTSNLTEANSKECLLGSALKDFYHFLLCVQFQDANKAAGNEILTKISFSGQVL
SIO_010081: LOC115062985
subclass of: SO_0000673
so part of: LOC115062985
location: complement(join(5779569..5779706,5788516..5788592,5809536..5809621,5854441..5854616,5856370..5856456))
location: region:5779569-5856456:-1
so has part: feature:5856370-5856456:-1:exon
so has part: feature:5854441-5854616:-1:exon
so has part: feature:5809536-5809621:-1:exon
so has part: feature:5788516-5788592:-1:exon
so has part: feature:5779569-5779706:-1:exon

XP_029389309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5856370-5856456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5854441-5854616:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5809536-5809621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5788516-5788592:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5779569-5779706:-1:exon

LOC115063009
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115063009
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5815902..5816008
location: region:5815902-5816008:1
so has part: feature:5815902-5816008:1:exon
subclass of: SO_0000623

115063009
type: Gene
SIO_000068: ncbigene

position:5815902:1
position: 5815902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5816008:1
position: 5816008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5815902-5816008:1:exon

LOC115063009
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snRNA
gene: LOC115063009
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842893.1
SIO_010081: LOC115063009
subclass of: SO_0000673
so part of: LOC115063009
location: 5815902..5816008
location: region:5815902-5816008:1
so has part: feature:5815902-5816008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5815902-5816008:1:exon

LOC110338753
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110338753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5888035..5889045
location: region:5888035-5889045:1
so has part: feature:5888035-5889045:1:exon

110338753
type: Gene
SIO_000068: ncbigene

position:5888035:1
position: 5888035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5889045:1
position: 5889045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5888035-5889045:1:exon

LOC110338753
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 144 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110338753
subclass of: SO_0000673
so part of: LOC110338753
location: 5888035..5889045
location: region:5888035-5889045:1
so has part: feature:5888035-5889045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5888035-5889045:1:exon

C22H8orf34
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: C22H8orf34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5954411..6122517)
location: region:5954411-6122517:-1
so has part: feature:5954411-6122517:-1:exon
subclass of: SO_0000010

110338606
type: Gene
SIO_000068: ncbigene

position:5954411:-1
position: 5954411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6122517:-1
position: 6122517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5954411-6122517:-1:exon

C22H8orf34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: C22H8orf34
product: chromosome 22 C8orf34 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533318.1
SIO_010081: C22H8orf34
subclass of: SO_0000673
so part of: C22H8orf34
location: complement(join(5954411..5960139,5967893..5968065,6000398..6000426,6014643..6014771,6041334..6041468,6047965..6048112,6122059..6122517))
location: region:5954411-6122517:-1
so has part: feature:6122059-6122517:-1:exon
so has part: feature:6047965-6048112:-1:exon
so has part: feature:6041334-6041468:-1:exon
so has part: feature:6014643-6014771:-1:exon
so has part: feature:6000398-6000426:-1:exon
so has part: feature:5967893-5968065:-1:exon
so has part: feature:5954411-5960139:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6122059-6122517:-1:exon

position:6122059:-1
position: 6122059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6047965-6048112:-1:exon

position:6047965:-1
position: 6047965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6048112:-1
position: 6048112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6041334-6041468:-1:exon

position:6041334:-1
position: 6041334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6041468:-1
position: 6041468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6014643-6014771:-1:exon

position:6014643:-1
position: 6014643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6014771:-1
position: 6014771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6000398-6000426:-1:exon

position:6000398:-1
position: 6000398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6000426:-1
position: 6000426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5967893-5968065:-1:exon

position:5967893:-1
position: 5967893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5968065:-1
position: 5968065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5954411-5960139:-1:exon

position:5960139:-1
position: 5960139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C22H8orf34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: C22H8orf34
product: chromosome 22 C8orf34 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533319.1
SIO_010081: C22H8orf34
subclass of: SO_0000673
so part of: C22H8orf34
location: complement(join(5959288..5960139,5967893..5968065,6000398..6000426,6041334..6041468,6047965..6048112,6122059..6122517))
location: region:5959288-6122517:-1
so has part: feature:6122059-6122517:-1:exon
so has part: feature:6047965-6048112:-1:exon
so has part: feature:6041334-6041468:-1:exon
so has part: feature:6000398-6000426:-1:exon
so has part: feature:5967893-5968065:-1:exon
so has part: feature:5959288-5960139:-1:exon

position:5959288:-1
position: 5959288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6122059-6122517:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6047965-6048112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6041334-6041468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6000398-6000426:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5967893-5968065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5959288-5960139:-1:exon

C22H8orf34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: C22H8orf34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf34 homolog isoform X2
translation: MASRQQTRIQAYLEKNKIGPLFEELMTKLITETPDQPIPFLIDHLQSKQGNRGQLQRTLSGSAALWAESESSELKGTTRRDFRSYDKPWQMNAKKPKKSKSDLAVSNISPPSPDSKSCIAISDELDKETLAFNSSLLRPRVIGEWIGRAENDADPLAAEMLQPPVPRSKNDSWESEDSSSSPAGSLKMEPKTKGLKQQQQQHKKLLAAMLSQDSFESIHSPTPSVIEEDIDNEDDAMELLGNFKN
SIO_010081: C22H8orf34
subclass of: SO_0000673
so part of: C22H8orf34
location: complement(join(5959956..5960139,5967893..5968065,6000398..6000426,6041334..6041468,6047965..6048112,6122059..6122127))
location: region:5959956-6122127:-1
so has part: feature:6122059-6122127:-1:exon
so has part: feature:6047965-6048112:-1:exon
so has part: feature:6041334-6041468:-1:exon
so has part: feature:6000398-6000426:-1:exon
so has part: feature:5967893-5968065:-1:exon
so has part: feature:5959956-5960139:-1:exon

XP_029389179.1
type: Protein
SIO_000068: ncbiprotein

position:5959956:-1
position: 5959956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6122127:-1
position: 6122127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6122059-6122127:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6047965-6048112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6041334-6041468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6000398-6000426:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5967893-5968065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5959956-5960139:-1:exon

C22H8orf34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: C22H8orf34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf34 homolog isoform X1
translation: MASRQQTRIQAYLEKNKIGPLFEELMTKLITETPDQPIPFLIDHLQSKQGNRGQLQRTLSGSAALWAESESSELKGTTRRDFRSYDKPWQMNAKKPKKSKSDLAVSNISPPSPDSKSLPRSVDHLKWNWRTKPQSRDFDELNHILQESKKLGKALENLSRSIAISDELDKETLAFNSSLLRPRVIGEWIGRAENDADPLAAEMLQPPVPRSKNDSWESEDSSSSPAGSLKMEPKTKGLKQQQQQHKKLLAAMLSQDSFESIHSPTPSVIEEDIDNEDDAMELLGNFKN
SIO_010081: C22H8orf34
subclass of: SO_0000673
so part of: C22H8orf34
location: complement(join(5959956..5960139,5967893..5968065,6000398..6000426,6014643..6014771,6041334..6041468,6047965..6048112,6122059..6122127))
location: region:5959956-6122127:-1
so has part: feature:6122059-6122127:-1:exon
so has part: feature:6047965-6048112:-1:exon
so has part: feature:6041334-6041468:-1:exon
so has part: feature:6014643-6014771:-1:exon
so has part: feature:6000398-6000426:-1:exon
so has part: feature:5967893-5968065:-1:exon
so has part: feature:5959956-5960139:-1:exon

XP_029389178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6122059-6122127:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6047965-6048112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6041334-6041468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6014643-6014771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6000398-6000426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5967893-5968065:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5959956-5960139:-1:exon

Prex2
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Prex2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6235511..6535830)
location: region:6235511-6535830:-1
so has part: feature:6235511-6535830:-1:exon
subclass of: SO_0000010

110338614
type: Gene
SIO_000068: ncbigene

position:6235511:-1
position: 6235511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6535830:-1
position: 6535830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6235511-6535830:-1:exon

Prex2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Prex2
product: phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021221903.2
SIO_010081: Prex2
subclass of: SO_0000673
so part of: Prex2
location: complement(join(6235511..6241302,6249923..6249990,6254120..6254222,6272118..6272308,6272543..6272609,6292769..6292883,6313658..6313801,6319664..6319766,6324060..6324277,6333028..6333069,6337396..6337524,6338152..6338242,6339089..6339171,6339758..6339852,6341865..6342044,6354362..6354569,6355073..6355295,6364640..6364801,6367152..6367336,6372174..6372291,6374747..6374883,6378393..6378478,6385214..6385362,6388034..6388126,6388264..6388406,6391279..6391351,6394312..6394387,6402041..6402090,6402676..6402779,6413945..6414045,6416639..6416783,6419327..6419476,6426191..6426294,6431528..6431661,6439803..6439964,6450417..6450518,6456541..6456645,6458726..6458848,6463290..6463361,6535290..6535830))
location: region:6235511-6535830:-1
so has part: feature:6535290-6535830:-1:exon
so has part: feature:6463290-6463361:-1:exon
so has part: feature:6458726-6458848:-1:exon
so has part: feature:6456541-6456645:-1:exon
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so has part: feature:6439803-6439964:-1:exon
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so has part: feature:6388264-6388406:-1:exon
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so has part: feature:6385214-6385362:-1:exon
so has part: feature:6378393-6378478:-1:exon
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so has part: feature:6339758-6339852:-1:exon
so has part: feature:6339089-6339171:-1:exon
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so has part: feature:6337396-6337524:-1:exon
so has part: feature:6333028-6333069:-1:exon
so has part: feature:6324060-6324277:-1:exon
so has part: feature:6319664-6319766:-1:exon
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so has part: feature:6272543-6272609:-1:exon
so has part: feature:6272118-6272308:-1:exon
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so has part: feature:6249923-6249990:-1:exon
so has part: feature:6235511-6241302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6535290-6535830:-1:exon

position:6535290:-1
position: 6535290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6463290-6463361:-1:exon

position:6463290:-1
position: 6463290
reference: sequence
type: ReverseStrandPosition
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position:6463361:-1
position: 6463361
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:6458726-6458848:-1:exon

position:6458726:-1
position: 6458726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6458848:-1
position: 6458848
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:6456541-6456645:-1:exon

position:6456541:-1
position: 6456541
reference: sequence
type: ReverseStrandPosition
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position:6456645:-1
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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:6450417-6450518:-1:exon

position:6450417:-1
position: 6450417
reference: sequence
type: ReverseStrandPosition
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position:6450518:-1
position: 6450518
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:6439803-6439964:-1:exon

position:6439803:-1
position: 6439803
reference: sequence
type: ReverseStrandPosition
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position:6439964:-1
position: 6439964
reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:6431528-6431661:-1:exon

position:6431528:-1
position: 6431528
reference: sequence
type: ReverseStrandPosition
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position:6431661:-1
position: 6431661
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urn:…
SIO_000300: 8
SIO_000628: feature:6426191-6426294:-1:exon

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position: 6426191
reference: sequence
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position:6426294:-1
position: 6426294
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urn:…
SIO_000300: 9
SIO_000628: feature:6419327-6419476:-1:exon

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position: 6419327
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urn:…
SIO_000300: 10
SIO_000628: feature:6416639-6416783:-1:exon

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position:6416783:-1
position: 6416783
reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:6413945-6414045:-1:exon

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position: 6413945
reference: sequence
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position:6414045:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:6402676-6402779:-1:exon

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position: 6402676
reference: sequence
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position:6402779:-1
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urn:…
SIO_000300: 13
SIO_000628: feature:6402041-6402090:-1:exon

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position: 6402041
reference: sequence
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position:6402090:-1
position: 6402090
reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:6394312-6394387:-1:exon

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position: 6394312
reference: sequence
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position:6394387:-1
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urn:…
SIO_000300: 15
SIO_000628: feature:6391279-6391351:-1:exon

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position: 6391279
reference: sequence
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position:6391351:-1
position: 6391351
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urn:…
SIO_000300: 16
SIO_000628: feature:6388264-6388406:-1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:6388034-6388126:-1:exon

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reference: sequence
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position:6388126:-1
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:6385214-6385362:-1:exon

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position: 6385214
reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:6378393-6378478:-1:exon

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urn:…
SIO_000300: 20
SIO_000628: feature:6374747-6374883:-1:exon

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position: 6374747
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position:6374883:-1
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urn:…
SIO_000300: 21
SIO_000628: feature:6372174-6372291:-1:exon

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urn:…
SIO_000300: 22
SIO_000628: feature:6367152-6367336:-1:exon

position:6367152:-1
position: 6367152
reference: sequence
type: ReverseStrandPosition
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position:6367336:-1
position: 6367336
reference: sequence
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urn:…
SIO_000300: 23
SIO_000628: feature:6364640-6364801:-1:exon

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position: 6364640
reference: sequence
type: ReverseStrandPosition
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position: 6364801
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urn:…
SIO_000300: 24
SIO_000628: feature:6355073-6355295:-1:exon

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position: 6355073
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urn:…
SIO_000300: 25
SIO_000628: feature:6354362-6354569:-1:exon

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position: 6354362
reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:6341865-6342044:-1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:6339758-6339852:-1:exon

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urn:…
SIO_000300: 28
SIO_000628: feature:6339089-6339171:-1:exon

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reference: sequence
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urn:…
SIO_000300: 29
SIO_000628: feature:6338152-6338242:-1:exon

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position: 6338152
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urn:…
SIO_000300: 30
SIO_000628: feature:6337396-6337524:-1:exon

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position: 6337396
reference: sequence
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reference: sequence
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urn:…
SIO_000300: 31
SIO_000628: feature:6333028-6333069:-1:exon

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position: 6333028
reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 32
SIO_000628: feature:6324060-6324277:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:6324277:-1
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reference: sequence
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urn:…
SIO_000300: 33
SIO_000628: feature:6319664-6319766:-1:exon

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position: 6319664
reference: sequence
type: ReverseStrandPosition
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position:6319766:-1
position: 6319766
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 34
SIO_000628: feature:6313658-6313801:-1:exon

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position: 6313658
reference: sequence
type: ReverseStrandPosition
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position:6313801:-1
position: 6313801
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 35
SIO_000628: feature:6292769-6292883:-1:exon

position:6292769:-1
position: 6292769
reference: sequence
type: ReverseStrandPosition
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position:6292883:-1
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reference: sequence
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urn:…
SIO_000300: 36
SIO_000628: feature:6272543-6272609:-1:exon

position:6272543:-1
position: 6272543
reference: sequence
type: ReverseStrandPosition
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position:6272609:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 37
SIO_000628: feature:6272118-6272308:-1:exon

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position: 6272118
reference: sequence
type: ReverseStrandPosition
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position:6272308:-1
position: 6272308
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 38
SIO_000628: feature:6254120-6254222:-1:exon

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position: 6254120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6254222:-1
position: 6254222
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 39
SIO_000628: feature:6249923-6249990:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:6249990:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 40
SIO_000628: feature:6235511-6241302:-1:exon

position:6241302:-1
position: 6241302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Prex2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Prex2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein
translation: MSDESAREADKQLRLRVCVLSELQKTERDYVGTLEFLVSAFLHRMNQCAAAKVDKNVTEETVKMLFSNIEEILAVHKEFLKVVEECLYPEPNAQQEVGTCFLHFKDKFRIYDEYCSNHEKAQKLLLELNKIRTIRTFLLNCMLLGGRKNTDVPLEGYLVTPIQRICKYPLLLKELLKRTPRKHSDYAAVMEALQAMKAVCSNINEAKRQMEKLEVLEEWQAHIEGWEGSNITDTCTEMLMCGVLMKISSGNIQERVFFLFDNLLVYCKRKHRRLKNSKASTDGHRYVFRGRINTEVMEVENVDDGTADFHSSGHIVVNGWKIHNTAKNKWFVCMAKSPEEKHEWFEAILKERERRKGLKLGMEQDTWVMISEQGEKLYKMMCKQGNLIKDRKRKLTTFPKCFLGSEFVSWLLEIGEIHRPEEGVHLGQALLENGIIHHVTDKHQFKPEQMLYRFRYDDGTFYPRSEMQDVISKGVRLYCRLHSLFTPVVRDKDYHLRTYKSVVMANKLIDWLIAQGDCRTREEAMIFAVGLCDNGFMHHVLEKSEFKDEPLLFRFFADEEMEGSNMKHRLMKHDLKVVENVIAKSLLIKSNEGSYGFGLEDKNKVPIIKLVEKGSNAEMAGMEVGKKIFAINGDLVFLRPFPEVDCFLKSCLNSRKPLRVLVSTKPRETVKIPDSADGLGFQIRGFGPSVVHAVGRGTVAAAAGLHPGQCIIKVNGINVSKETHASVIAHVTACRKYKRPMKQDSIQWVYDSLESAHEDIHKSHSKPPGDGAGGAFECKVEDVIDKFNTMAIIDGKKEHVSLTVDNVHLEYGVVYEYDSTAGTKCNVVEKMVEPKGFFSLTAKILEALAKSDEHFVQNCTSLTSLNEVITTDLQSKFTSMCNERIEHVCHRISSYGRFSRVLKNRAWPTFKQAKPKISPLHSSDFCPTNCHVNVMEVSYPKTSTSLGSAFGVQLDSRKHNSHDKENKSAEPGKLSPMVYIQHTITTMAAPSGLSLGHKDGHGLRYLLKEEDLETQDIYHKLLGKLQTALKEVEMCVCQIDDLLSSITYSPKLERKTTECVIPTDSDNEKGERNSKRVCFNVAGDEQEDSGHDTVSNRDSYSDCNSNRNSIASFTSICSSQCSSYFHSDEMDSGDELPISVRISHDKQDKIHTCLEQLFSQIDSIINLLKGQAVIRAFEQTKYLTPGRGLQEFQQEMEAKLSCPRRLRLHLKQDPWNLPSGIQALAQSIRKYVEEVKCRILLALLEYSDSETQLRRDMVFCQSLVATVCAFSEQLMAALNQMFDNSKENEMETCEASRRWLDQIANAGVLFHFQSLLSPNLKDEQAMLEDTLVALFDLEKVSFFFKASEEDPLVANVPLTYQVEGSRQALKVYFYMDSYHFEQLPQRLKNGGGFKIHPVLFSQALESMEGYRYRDDISVEEFQAQINTASLEKVKQYNQKLRAFYLDKSNSPPNATSKAAYIDKLMKPLNALDELYRLITSFIRSKRIAACVNTPCGASGVGLLSVSSELCDRLGACHIIMCSSGVHRCTLSVTLEQAITLARSHGLPPRYIMQAMDVMRKQGARVQNTAKNLGVRDRTPQSAPRLYKLCEPPPPVGEE
SIO_010081: Prex2
subclass of: SO_0000673
so part of: Prex2
location: complement(join(6241257..6241302,6249923..6249990,6254120..6254222,6272118..6272308,6272543..6272609,6292769..6292883,6313658..6313801,6319664..6319766,6324060..6324277,6333028..6333069,6337396..6337524,6338152..6338242,6339089..6339171,6339758..6339852,6341865..6342044,6354362..6354569,6355073..6355295,6364640..6364801,6367152..6367336,6372174..6372291,6374747..6374883,6378393..6378478,6385214..6385362,6388034..6388126,6388264..6388406,6391279..6391351,6394312..6394387,6402041..6402090,6402676..6402779,6413945..6414045,6416639..6416783,6419327..6419476,6426191..6426294,6431528..6431661,6439803..6439964,6450417..6450518,6456541..6456645,6458726..6458848,6463290..6463361,6535290..6535406))
location: region:6241257-6535406:-1
so has part: feature:6535290-6535406:-1:exon
so has part: feature:6463290-6463361:-1:exon
so has part: feature:6458726-6458848:-1:exon
so has part: feature:6456541-6456645:-1:exon
so has part: feature:6450417-6450518:-1:exon
so has part: feature:6439803-6439964:-1:exon
so has part: feature:6431528-6431661:-1:exon
so has part: feature:6426191-6426294:-1:exon
so has part: feature:6419327-6419476:-1:exon
so has part: feature:6416639-6416783:-1:exon
so has part: feature:6413945-6414045:-1:exon
so has part: feature:6402676-6402779:-1:exon
so has part: feature:6402041-6402090:-1:exon
so has part: feature:6394312-6394387:-1:exon
so has part: feature:6391279-6391351:-1:exon
so has part: feature:6388264-6388406:-1:exon
so has part: feature:6388034-6388126:-1:exon
so has part: feature:6385214-6385362:-1:exon
so has part: feature:6378393-6378478:-1:exon
so has part: feature:6374747-6374883:-1:exon
so has part: feature:6372174-6372291:-1:exon
so has part: feature:6367152-6367336:-1:exon
so has part: feature:6364640-6364801:-1:exon
so has part: feature:6355073-6355295:-1:exon
so has part: feature:6354362-6354569:-1:exon
so has part: feature:6341865-6342044:-1:exon
so has part: feature:6339758-6339852:-1:exon
so has part: feature:6339089-6339171:-1:exon
so has part: feature:6338152-6338242:-1:exon
so has part: feature:6337396-6337524:-1:exon
so has part: feature:6333028-6333069:-1:exon
so has part: feature:6324060-6324277:-1:exon
so has part: feature:6319664-6319766:-1:exon
so has part: feature:6313658-6313801:-1:exon
so has part: feature:6292769-6292883:-1:exon
so has part: feature:6272543-6272609:-1:exon
so has part: feature:6272118-6272308:-1:exon
so has part: feature:6254120-6254222:-1:exon
so has part: feature:6249923-6249990:-1:exon
so has part: feature:6241257-6241302:-1:exon

XP_021077562.1
type: Protein
SIO_000068: ncbiprotein

position:6241257:-1
position: 6241257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6535406:-1
position: 6535406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6535290-6535406:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6463290-6463361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6458726-6458848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6456541-6456645:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6450417-6450518:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6439803-6439964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6431528-6431661:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6426191-6426294:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6419327-6419476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6416639-6416783:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6413945-6414045:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6402676-6402779:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6402041-6402090:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6394312-6394387:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6391279-6391351:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6388264-6388406:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6388034-6388126:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6385214-6385362:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6378393-6378478:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6374747-6374883:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6372174-6372291:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6367152-6367336:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6364640-6364801:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6355073-6355295:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6354362-6354569:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6341865-6342044:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6339758-6339852:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6339089-6339171:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6338152-6338242:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6337396-6337524:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6333028-6333069:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6324060-6324277:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:6319664-6319766:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:6313658-6313801:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:6292769-6292883:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:6272543-6272609:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:6272118-6272308:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:6254120-6254222:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:6249923-6249990:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:6241257-6241302:-1:exon

Cpa6
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Cpa6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6753482..7092862
location: region:6753482-7092862:1
so has part: feature:6753482-7092862:1:exon
subclass of: SO_0000010

110338756
type: Gene
SIO_000068: ncbigene

position:6753482:1
position: 6753482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7092862:1
position: 7092862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6753482-7092862:1:exon

Cpa6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Cpa6
product: carboxypeptidase A6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 5 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021222178.1
SIO_010081: Cpa6
subclass of: SO_0000673
so part of: Cpa6
location: join(6753482..6753816,6868077..6868152,6966779..6966903,6972881..6972995,6975483..6975584,6977500..6977604,7029722..7029832,7030787..7030877,7079945..7080147,7088033..7088117,7092275..7092862)
location: region:6753482-7092862:1
so has part: feature:6753482-6753816:1:exon
so has part: feature:6868077-6868152:1:exon
so has part: feature:6966779-6966903:1:exon
so has part: feature:6972881-6972995:1:exon
so has part: feature:6975483-6975584:1:exon
so has part: feature:6977500-6977604:1:exon
so has part: feature:7029722-7029832:1:exon
so has part: feature:7030787-7030877:1:exon
so has part: feature:7079945-7080147:1:exon
so has part: feature:7088033-7088117:1:exon
so has part: feature:7092275-7092862:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6753482-6753816:1:exon

position:6753816:1
position: 6753816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6868077-6868152:1:exon

position:6868077:1
position: 6868077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6868152:1
position: 6868152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6966779-6966903:1:exon

position:6966779:1
position: 6966779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6966903:1
position: 6966903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6972881-6972995:1:exon

position:6972881:1
position: 6972881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6972995:1
position: 6972995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6975483-6975584:1:exon

position:6975483:1
position: 6975483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6975584:1
position: 6975584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6977500-6977604:1:exon

position:6977500:1
position: 6977500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6977604:1
position: 6977604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7029722-7029832:1:exon

position:7029722:1
position: 7029722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7029832:1
position: 7029832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7030787-7030877:1:exon

position:7030787:1
position: 7030787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7030877:1
position: 7030877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7079945-7080147:1:exon

position:7079945:1
position: 7079945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7080147:1
position: 7080147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7088033-7088117:1:exon

position:7088033:1
position: 7088033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7088117:1
position: 7088117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7092275-7092862:1:exon

position:7092275:1
position: 7092275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cpa6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Cpa6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase A6
translation: MKFLGKPRSHTAAFLPVCWLLSNILKPGHCHSYDNRYAGDKVIRLIPKSEEEALALKNIYHHLKVDLWQPSSISYVSEGTITDVHISQNASRTLLAFLQETHIYYKVLIEDLQKAVENENSLQTQRNRRSLSDYNYEVYHSLEDIQSWLHRLNQTQPGLVRVFSIGRSYEGRPLFVIQLGRKSGAYKRAVWIDCGIHAREWIGPAFCQWFVREALLTYKTDPAMKKMLNHLYFYIMPVFNVDGYQFSWTHDRFWRKTRSRDSKFHCHGVDANRNWKVKWCDEGASSHPCDDTYYGPFPESEPEVKAVANFLRKHRKRIRAYLSFHAYAQMLLYPYSYKYATIPNFSCVEFAAHKAVKALRSLHGIRYRHGPASQTLYVSSGNSMDWAYKNGIPYAFAFELRDTGRFGFLLPEMLIKATCTETMLAVKNITMHLLKKCP
SIO_010081: Cpa6
subclass of: SO_0000673
so part of: Cpa6
location: join(6753701..6753816,6868077..6868152,6966779..6966903,6972881..6972995,6975483..6975584,6977500..6977604,7029722..7029832,7030787..7030877,7079945..7080147,7088033..7088117,7092275..7092462)
location: region:6753701-7092462:1
so has part: feature:6753701-6753816:1:exon
so has part: feature:6868077-6868152:1:exon
so has part: feature:6966779-6966903:1:exon
so has part: feature:6972881-6972995:1:exon
so has part: feature:6975483-6975584:1:exon
so has part: feature:6977500-6977604:1:exon
so has part: feature:7029722-7029832:1:exon
so has part: feature:7030787-7030877:1:exon
so has part: feature:7079945-7080147:1:exon
so has part: feature:7088033-7088117:1:exon
so has part: feature:7092275-7092462:1:exon

XP_021077837.1
type: Protein
SIO_000068: ncbiprotein

position:6753701:1
position: 6753701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7092462:1
position: 7092462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6753701-6753816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6868077-6868152:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6966779-6966903:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6972881-6972995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6975483-6975584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6977500-6977604:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7029722-7029832:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7030787-7030877:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7079945-7080147:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7088033-7088117:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7092275-7092462:1:exon

LOC110338992
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110338992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6778857..6779922)
location: region:6778857-6779922:-1
so has part: feature:6778857-6779922:-1:exon

110338992
type: Gene
SIO_000068: ncbigene

position:6778857:-1
position: 6778857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6779922:-1
position: 6779922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6778857-6779922:-1:exon

LOC110338992
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338992
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC110338992
subclass of: SO_0000673
so part of: LOC110338992
location: complement(6778857..6779344)
location: region:6778857-6779344:-1
so has part: feature:6778857-6779344:-1:exon

position:6779344:-1
position: 6779344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6778857-6779344:-1:exon

LOC110338992
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338992
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC110338992
subclass of: SO_0000673
so part of: LOC110338992
location: complement(6779918..6779922)
location: region:6779918-6779922:-1
so has part: feature:6779918-6779922:-1:exon

position:6779918:-1
position: 6779918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6779918-6779922:-1:exon

LOC115063010
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115063010
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6909564..6909670
location: region:6909564-6909670:1
so has part: feature:6909564-6909670:1:exon
subclass of: SO_0000623

115063010
type: Gene
SIO_000068: ncbigene

position:6909564:1
position: 6909564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6909670:1
position: 6909670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6909564-6909670:1:exon

LOC115063010
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snRNA
gene: LOC115063010
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842894.1
SIO_010081: LOC115063010
subclass of: SO_0000673
so part of: LOC115063010
location: 6909564..6909670
location: region:6909564-6909670:1
so has part: feature:6909564-6909670:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6909564-6909670:1:exon

LOC110338993
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110338993
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6909636..6911095
location: region:6909636-6911095:1
so has part: feature:6909636-6911095:1:exon

110338993
type: Gene
SIO_000068: ncbigene

position:6909636:1
position: 6909636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6911095:1
position: 6911095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6909636-6911095:1:exon

LOC110338993
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338993
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110338993
subclass of: SO_0000673
so part of: LOC110338993
location: 6909636..6910570
location: region:6909636-6910570:1
so has part: feature:6909636-6910570:1:exon

position:6910570:1
position: 6910570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6909636-6910570:1:exon

LOC110338993
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110338993
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110338993
subclass of: SO_0000673
so part of: LOC110338993
location: 6910994..6911095
location: region:6910994-6911095:1
so has part: feature:6910994-6911095:1:exon

position:6910994:1
position: 6910994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6910994-6911095:1:exon

Arfgef1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Arfgef1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7170698..7266017
location: region:7170698-7266017:1
so has part: feature:7170698-7266017:1:exon
subclass of: SO_0000010

110338944
type: Gene
SIO_000068: ncbigene

position:7170698:1
position: 7170698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7266017:1
position: 7266017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7170698-7266017:1:exon

Arfgef1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Arfgef1
product: ADP ribosylation factor guanine nucleotide exchange factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021222418.2
SIO_010081: Arfgef1
subclass of: SO_0000673
so part of: Arfgef1
location: join(7170698..7171388,7187029..7187059,7187638..7187794,7189736..7189882,7190742..7190921,7194448..7194724,7198908..7199009,7203819..7203994,7204780..7204913,7208997..7209231,7213619..7213718,7213796..7213935,7214028..7214136,7214404..7214605,7218783..7218894,7219098..7219303,7219736..7219820,7222460..7222631,7226063..7226214,7231569..7231697,7232668..7232826,7233033..7233183,7240204..7240294,7242990..7243030,7243122..7243291,7243948..7244099,7244235..7244407,7245913..7246073,7246942..7247072,7249606..7249735,7250282..7250417,7250500..7250638,7252235..7252307,7256115..7256247,7258806..7258945,7260958..7261126,7262006..7262144,7263036..7263153,7264615..7266017)
location: region:7170698-7266017:1
so has part: feature:7170698-7171388:1:exon
so has part: feature:7187029-7187059:1:exon
so has part: feature:7187638-7187794:1:exon
so has part: feature:7189736-7189882:1:exon
so has part: feature:7190742-7190921:1:exon
so has part: feature:7194448-7194724:1:exon
so has part: feature:7198908-7199009:1:exon
so has part: feature:7203819-7203994:1:exon
so has part: feature:7204780-7204913:1:exon
so has part: feature:7208997-7209231:1:exon
so has part: feature:7213619-7213718:1:exon
so has part: feature:7213796-7213935:1:exon
so has part: feature:7214028-7214136:1:exon
so has part: feature:7214404-7214605:1:exon
so has part: feature:7218783-7218894:1:exon
so has part: feature:7219098-7219303:1:exon
so has part: feature:7219736-7219820:1:exon
so has part: feature:7222460-7222631:1:exon
so has part: feature:7226063-7226214:1:exon
so has part: feature:7231569-7231697:1:exon
so has part: feature:7232668-7232826:1:exon
so has part: feature:7233033-7233183:1:exon
so has part: feature:7240204-7240294:1:exon
so has part: feature:7242990-7243030:1:exon
so has part: feature:7243122-7243291:1:exon
so has part: feature:7243948-7244099:1:exon
so has part: feature:7244235-7244407:1:exon
so has part: feature:7245913-7246073:1:exon
so has part: feature:7246942-7247072:1:exon
so has part: feature:7249606-7249735:1:exon
so has part: feature:7250282-7250417:1:exon
so has part: feature:7250500-7250638:1:exon
so has part: feature:7252235-7252307:1:exon
so has part: feature:7256115-7256247:1:exon
so has part: feature:7258806-7258945:1:exon
so has part: feature:7260958-7261126:1:exon
so has part: feature:7262006-7262144:1:exon
so has part: feature:7263036-7263153:1:exon
so has part: feature:7264615-7266017:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7170698-7171388:1:exon

position:7171388:1
position: 7171388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7187029-7187059:1:exon

position:7187029:1
position: 7187029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7187059:1
position: 7187059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7187638-7187794:1:exon

position:7187638:1
position: 7187638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7187794:1
position: 7187794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7189736-7189882:1:exon

position:7189736:1
position: 7189736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7189882:1
position: 7189882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7190742-7190921:1:exon

position:7190742:1
position: 7190742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7190921:1
position: 7190921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7194448-7194724:1:exon

position:7194448:1
position: 7194448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7194724:1
position: 7194724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7198908-7199009:1:exon

position:7198908:1
position: 7198908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7199009:1
position: 7199009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7203819-7203994:1:exon

position:7203819:1
position: 7203819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7203994:1
position: 7203994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7204780-7204913:1:exon

position:7204780:1
position: 7204780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7204913:1
position: 7204913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7208997-7209231:1:exon

position:7208997:1
position: 7208997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7209231:1
position: 7209231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7213619-7213718:1:exon

position:7213619:1
position: 7213619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7213718:1
position: 7213718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7213796-7213935:1:exon

position:7213796:1
position: 7213796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7213935:1
position: 7213935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7214028-7214136:1:exon

position:7214028:1
position: 7214028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7214136:1
position: 7214136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7214404-7214605:1:exon

position:7214404:1
position: 7214404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7214605:1
position: 7214605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7218783-7218894:1:exon

position:7218783:1
position: 7218783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7218894:1
position: 7218894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7219098-7219303:1:exon

position:7219098:1
position: 7219098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7219303:1
position: 7219303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7219736-7219820:1:exon

position:7219736:1
position: 7219736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7219820:1
position: 7219820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7222460-7222631:1:exon

position:7222460:1
position: 7222460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7222631:1
position: 7222631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7226063-7226214:1:exon

position:7226063:1
position: 7226063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7226214:1
position: 7226214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7231569-7231697:1:exon

position:7231569:1
position: 7231569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7231697:1
position: 7231697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7232668-7232826:1:exon

position:7232668:1
position: 7232668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7232826:1
position: 7232826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7233033-7233183:1:exon

position:7233033:1
position: 7233033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7233183:1
position: 7233183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7240204-7240294:1:exon

position:7240204:1
position: 7240204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7240294:1
position: 7240294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7242990-7243030:1:exon

position:7242990:1
position: 7242990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7243030:1
position: 7243030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7243122-7243291:1:exon

position:7243122:1
position: 7243122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7243291:1
position: 7243291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7243948-7244099:1:exon

position:7243948:1
position: 7243948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7244099:1
position: 7244099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7244235-7244407:1:exon

position:7244235:1
position: 7244235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7244407:1
position: 7244407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7245913-7246073:1:exon

position:7245913:1
position: 7245913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7246073:1
position: 7246073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:7246942-7247072:1:exon

position:7246942:1
position: 7246942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7247072:1
position: 7247072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:7249606-7249735:1:exon

position:7249606:1
position: 7249606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7249735:1
position: 7249735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:7250282-7250417:1:exon

position:7250282:1
position: 7250282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7250417:1
position: 7250417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:7250500-7250638:1:exon

position:7250500:1
position: 7250500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7250638:1
position: 7250638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:7252235-7252307:1:exon

position:7252235:1
position: 7252235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7252307:1
position: 7252307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:7256115-7256247:1:exon

position:7256115:1
position: 7256115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7256247:1
position: 7256247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:7258806-7258945:1:exon

position:7258806:1
position: 7258806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7258945:1
position: 7258945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:7260958-7261126:1:exon

position:7260958:1
position: 7260958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7261126:1
position: 7261126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:7262006-7262144:1:exon

position:7262006:1
position: 7262006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7262144:1
position: 7262144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:7263036-7263153:1:exon

position:7263036:1
position: 7263036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7263153:1
position: 7263153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:7264615-7266017:1:exon

position:7264615:1
position: 7264615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Arfgef1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Arfgef1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
translation: MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKVETEKQSPPHGEAKAGSGTLPPVKSKTNFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGSAPDSTTPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYNIYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMERERHRQQQHLLQSPVSHHEPESPHLRYLPPQTVDHITQEHEGDLDPQTHDVDKSLQDDTEPENGSDISSAENEQTEADQATAAETLSKNDILYDGDCEEKPHDIVQSIVEEMVNIIVGDMGEGMAISASTDSNTGTVEDGSDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPSPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPVFRTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTSSFDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNVQELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPSEQEISEIKHPETINRYGSLNSLESTSSSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRLFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSTKQNVASEKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSLTGTKDQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELLSTTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCIAQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTLVFEKHFPATIDSFQDAVKCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMSVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSGTNCLENVVILNGEKFTLEIWDKTCNCTLDIFKTTIPHALLTWRPTSGEAAPPSPSAVSEKQLDAISQKSVDIHDSIQPRSSDNRQQAPLVSVSTVSEEVSKVKSTAKFPEQKLFAALLIKCVVQLELIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVRVDTQDQGMYRFLTSQQLFKLLDCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYMDESRVSAWEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKISDNRFKAHASFYYPLLCEIMQFDLIPELRAVLRRFFLRIGIVFQISQPPEQELGINRQ
SIO_010081: Arfgef1
subclass of: SO_0000673
so part of: Arfgef1
location: join(7171265..7171388,7187029..7187059,7187638..7187794,7189736..7189882,7190742..7190921,7194448..7194724,7198908..7199009,7203819..7203994,7204780..7204913,7208997..7209231,7213619..7213718,7213796..7213935,7214028..7214136,7214404..7214605,7218783..7218894,7219098..7219303,7219736..7219820,7222460..7222631,7226063..7226214,7231569..7231697,7232668..7232826,7233033..7233183,7240204..7240294,7242990..7243030,7243122..7243291,7243948..7244099,7244235..7244407,7245913..7246073,7246942..7247072,7249606..7249735,7250282..7250417,7250500..7250638,7252235..7252307,7256115..7256247,7258806..7258945,7260958..7261126,7262006..7262144,7263036..7263153,7264615..7264779)
location: region:7171265-7264779:1
so has part: feature:7171265-7171388:1:exon
so has part: feature:7187029-7187059:1:exon
so has part: feature:7187638-7187794:1:exon
so has part: feature:7189736-7189882:1:exon
so has part: feature:7190742-7190921:1:exon
so has part: feature:7194448-7194724:1:exon
so has part: feature:7198908-7199009:1:exon
so has part: feature:7203819-7203994:1:exon
so has part: feature:7204780-7204913:1:exon
so has part: feature:7208997-7209231:1:exon
so has part: feature:7213619-7213718:1:exon
so has part: feature:7213796-7213935:1:exon
so has part: feature:7214028-7214136:1:exon
so has part: feature:7214404-7214605:1:exon
so has part: feature:7218783-7218894:1:exon
so has part: feature:7219098-7219303:1:exon
so has part: feature:7219736-7219820:1:exon
so has part: feature:7222460-7222631:1:exon
so has part: feature:7226063-7226214:1:exon
so has part: feature:7231569-7231697:1:exon
so has part: feature:7232668-7232826:1:exon
so has part: feature:7233033-7233183:1:exon
so has part: feature:7240204-7240294:1:exon
so has part: feature:7242990-7243030:1:exon
so has part: feature:7243122-7243291:1:exon
so has part: feature:7243948-7244099:1:exon
so has part: feature:7244235-7244407:1:exon
so has part: feature:7245913-7246073:1:exon
so has part: feature:7246942-7247072:1:exon
so has part: feature:7249606-7249735:1:exon
so has part: feature:7250282-7250417:1:exon
so has part: feature:7250500-7250638:1:exon
so has part: feature:7252235-7252307:1:exon
so has part: feature:7256115-7256247:1:exon
so has part: feature:7258806-7258945:1:exon
so has part: feature:7260958-7261126:1:exon
so has part: feature:7262006-7262144:1:exon
so has part: feature:7263036-7263153:1:exon
so has part: feature:7264615-7264779:1:exon

XP_021078077.1
type: Protein
SIO_000068: ncbiprotein

position:7171265:1
position: 7171265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7264779:1
position: 7264779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7171265-7171388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7187029-7187059:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7187638-7187794:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7189736-7189882:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7190742-7190921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7194448-7194724:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7198908-7199009:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7203819-7203994:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7204780-7204913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7208997-7209231:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7213619-7213718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7213796-7213935:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7214028-7214136:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7214404-7214605:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7218783-7218894:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7219098-7219303:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7219736-7219820:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7222460-7222631:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7226063-7226214:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7231569-7231697:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7232668-7232826:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7233033-7233183:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7240204-7240294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7242990-7243030:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7243122-7243291:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7243948-7244099:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7244235-7244407:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7245913-7246073:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7246942-7247072:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7249606-7249735:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7250282-7250417:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7250500-7250638:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7252235-7252307:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7256115-7256247:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7258806-7258945:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7260958-7261126:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7262006-7262144:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7263036-7263153:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7264615-7264779:1:exon

Arfgef1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Arfgef1
product: ADP ribosylation factor guanine nucleotide exchange factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029533233.1
SIO_010081: Arfgef1
subclass of: SO_0000673
so part of: Arfgef1
location: join(7199180..7199328,7203819..7203994,7204780..7204913,7208997..7209231,7213619..7213718,7213796..7213935,7214028..7214136,7214404..7214605,7218783..7218894,7219098..7219303,7219736..7219820,7222460..7222631,7226063..7226214,7231569..7231697,7232668..7232826,7233033..7233183,7240204..7240294,7242990..7243030,7243122..7243291,7243948..7244099,7244235..7244407,7245913..7246073,7246942..7247072,7249606..7249735,7250282..7250417,7250500..7250638,7252235..7252307,7256115..7256247,7258806..7258945,7260958..7261126,7262006..7262144,7263036..7263153,7264615..7266017)
location: region:7199180-7266017:1
so has part: feature:7199180-7199328:1:exon
so has part: feature:7203819-7203994:1:exon
so has part: feature:7204780-7204913:1:exon
so has part: feature:7208997-7209231:1:exon
so has part: feature:7213619-7213718:1:exon
so has part: feature:7213796-7213935:1:exon
so has part: feature:7214028-7214136:1:exon
so has part: feature:7214404-7214605:1:exon
so has part: feature:7218783-7218894:1:exon
so has part: feature:7219098-7219303:1:exon
so has part: feature:7219736-7219820:1:exon
so has part: feature:7222460-7222631:1:exon
so has part: feature:7226063-7226214:1:exon
so has part: feature:7231569-7231697:1:exon
so has part: feature:7232668-7232826:1:exon
so has part: feature:7233033-7233183:1:exon
so has part: feature:7240204-7240294:1:exon
so has part: feature:7242990-7243030:1:exon
so has part: feature:7243122-7243291:1:exon
so has part: feature:7243948-7244099:1:exon
so has part: feature:7244235-7244407:1:exon
so has part: feature:7245913-7246073:1:exon
so has part: feature:7246942-7247072:1:exon
so has part: feature:7249606-7249735:1:exon
so has part: feature:7250282-7250417:1:exon
so has part: feature:7250500-7250638:1:exon
so has part: feature:7252235-7252307:1:exon
so has part: feature:7256115-7256247:1:exon
so has part: feature:7258806-7258945:1:exon
so has part: feature:7260958-7261126:1:exon
so has part: feature:7262006-7262144:1:exon
so has part: feature:7263036-7263153:1:exon
so has part: feature:7264615-7266017:1:exon

position:7199180:1
position: 7199180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7199180-7199328:1:exon

position:7199328:1
position: 7199328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7203819-7203994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7204780-7204913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7208997-7209231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7213619-7213718:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7213796-7213935:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7214028-7214136:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7214404-7214605:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7218783-7218894:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7219098-7219303:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7219736-7219820:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7222460-7222631:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7226063-7226214:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7231569-7231697:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7232668-7232826:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7233033-7233183:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7240204-7240294:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7242990-7243030:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7243122-7243291:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7243948-7244099:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7244235-7244407:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7245913-7246073:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7246942-7247072:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7249606-7249735:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7250282-7250417:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7250500-7250638:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7252235-7252307:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7256115-7256247:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7258806-7258945:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7260958-7261126:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7262006-7262144:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7263036-7263153:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7264615-7266017:1:exon

Arfgef1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Arfgef1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X2
translation: MPCGQNICVCVYQQTNMGEGMAISASTDSNTGTVEDGSDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPSPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPVFRTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTSSFDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNVQELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPSEQEISEIKHPETINRYGSLNSLESTSSSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRLFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSTKQNVASEKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSLTGTKDQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELLSTTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCIAQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTLVFEKHFPATIDSFQDAVKCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMSVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSGTNCLENVVILNGEKFTLEIWDKTCNCTLDIFKTTIPHALLTWRPTSGEAAPPSPSAVSEKQLDAISQKSVDIHDSIQPRSSDNRQQAPLVSVSTVSEEVSKVKSTAKFPEQKLFAALLIKCVVQLELIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVRVDTQDQGMYRFLTSQQLFKLLDCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYMDESRVSAWEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKISDNRFKAHASFYYPLLCEIMQFDLIPELRAVLRRFFLRIGIVFQISQPPEQELGINRQ
SIO_010081: Arfgef1
subclass of: SO_0000673
so part of: Arfgef1
location: join(7199283..7199328,7203819..7203994,7204780..7204913,7208997..7209231,7213619..7213718,7213796..7213935,7214028..7214136,7214404..7214605,7218783..7218894,7219098..7219303,7219736..7219820,7222460..7222631,7226063..7226214,7231569..7231697,7232668..7232826,7233033..7233183,7240204..7240294,7242990..7243030,7243122..7243291,7243948..7244099,7244235..7244407,7245913..7246073,7246942..7247072,7249606..7249735,7250282..7250417,7250500..7250638,7252235..7252307,7256115..7256247,7258806..7258945,7260958..7261126,7262006..7262144,7263036..7263153,7264615..7264779)
location: region:7199283-7264779:1
so has part: feature:7199283-7199328:1:exon
so has part: feature:7203819-7203994:1:exon
so has part: feature:7204780-7204913:1:exon
so has part: feature:7208997-7209231:1:exon
so has part: feature:7213619-7213718:1:exon
so has part: feature:7213796-7213935:1:exon
so has part: feature:7214028-7214136:1:exon
so has part: feature:7214404-7214605:1:exon
so has part: feature:7218783-7218894:1:exon
so has part: feature:7219098-7219303:1:exon
so has part: feature:7219736-7219820:1:exon
so has part: feature:7222460-7222631:1:exon
so has part: feature:7226063-7226214:1:exon
so has part: feature:7231569-7231697:1:exon
so has part: feature:7232668-7232826:1:exon
so has part: feature:7233033-7233183:1:exon
so has part: feature:7240204-7240294:1:exon
so has part: feature:7242990-7243030:1:exon
so has part: feature:7243122-7243291:1:exon
so has part: feature:7243948-7244099:1:exon
so has part: feature:7244235-7244407:1:exon
so has part: feature:7245913-7246073:1:exon
so has part: feature:7246942-7247072:1:exon
so has part: feature:7249606-7249735:1:exon
so has part: feature:7250282-7250417:1:exon
so has part: feature:7250500-7250638:1:exon
so has part: feature:7252235-7252307:1:exon
so has part: feature:7256115-7256247:1:exon
so has part: feature:7258806-7258945:1:exon
so has part: feature:7260958-7261126:1:exon
so has part: feature:7262006-7262144:1:exon
so has part: feature:7263036-7263153:1:exon
so has part: feature:7264615-7264779:1:exon

XP_029389093.1
type: Protein
SIO_000068: ncbiprotein

position:7199283:1
position: 7199283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7199283-7199328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7203819-7203994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7204780-7204913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7208997-7209231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7213619-7213718:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7213796-7213935:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7214028-7214136:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7214404-7214605:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7218783-7218894:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7219098-7219303:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7219736-7219820:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7222460-7222631:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7226063-7226214:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7231569-7231697:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7232668-7232826:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7233033-7233183:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7240204-7240294:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7242990-7243030:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7243122-7243291:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7243948-7244099:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7244235-7244407:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7245913-7246073:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7246942-7247072:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7249606-7249735:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7250282-7250417:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7250500-7250638:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7252235-7252307:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7256115-7256247:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7258806-7258945:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7260958-7261126:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7262006-7262144:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7263036-7263153:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7264615-7264779:1:exon

Cspp1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Cspp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7266880..7355822)
location: region:7266880-7355822:-1
so has part: feature:7266880-7355822:-1:exon
subclass of: SO_0000010

110338684
type: Gene
SIO_000068: ncbigene

position:7266880:-1
position: 7266880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7355822:-1
position: 7355822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7266880-7355822:-1:exon

Cspp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Cspp1
product: centrosome and spindle pole associated protein 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533240.1
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
location: complement(join(7266880..7267745,7269261..7269399,7270224..7270333,7270997..7271060,7273511..7273557,7276109..7276249,7277124..7277263,7279801..7279918,7280679..7280745,7283043..7283147,7283665..7283811,7284133..7284282,7287159..7287271,7291117..7291269,7298296..7298443,7302019..7302148,7303397..7303475,7304201..7304334,7322850..7323256,7324076..7324174,7325116..7325196,7329326..7329349,7330333..7330436,7341595..7341697,7343941..7344049,7355567..7355822))
location: region:7266880-7355822:-1
so has part: feature:7355567-7355822:-1:exon
so has part: feature:7343941-7344049:-1:exon
so has part: feature:7341595-7341697:-1:exon
so has part: feature:7330333-7330436:-1:exon
so has part: feature:7329326-7329349:-1:exon
so has part: feature:7325116-7325196:-1:exon
so has part: feature:7324076-7324174:-1:exon
so has part: feature:7322850-7323256:-1:exon
so has part: feature:7304201-7304334:-1:exon
so has part: feature:7303397-7303475:-1:exon
so has part: feature:7302019-7302148:-1:exon
so has part: feature:7298296-7298443:-1:exon
so has part: feature:7291117-7291269:-1:exon
so has part: feature:7287159-7287271:-1:exon
so has part: feature:7284133-7284282:-1:exon
so has part: feature:7283665-7283811:-1:exon
so has part: feature:7283043-7283147:-1:exon
so has part: feature:7280679-7280745:-1:exon
so has part: feature:7279801-7279918:-1:exon
so has part: feature:7277124-7277263:-1:exon
so has part: feature:7276109-7276249:-1:exon
so has part: feature:7273511-7273557:-1:exon
so has part: feature:7270997-7271060:-1:exon
so has part: feature:7270224-7270333:-1:exon
so has part: feature:7269261-7269399:-1:exon
so has part: feature:7266880-7267745:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7355567-7355822:-1:exon

position:7355567:-1
position: 7355567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7343941-7344049:-1:exon

position:7343941:-1
position: 7343941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7344049:-1
position: 7344049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7341595-7341697:-1:exon

position:7341595:-1
position: 7341595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7341697:-1
position: 7341697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7330333-7330436:-1:exon

position:7330333:-1
position: 7330333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7330436:-1
position: 7330436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7329326-7329349:-1:exon

position:7329326:-1
position: 7329326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7329349:-1
position: 7329349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7325116-7325196:-1:exon

position:7325116:-1
position: 7325116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7325196:-1
position: 7325196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7324076-7324174:-1:exon

position:7324076:-1
position: 7324076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7324174:-1
position: 7324174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7322850-7323256:-1:exon

position:7322850:-1
position: 7322850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7323256:-1
position: 7323256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7304201-7304334:-1:exon

position:7304201:-1
position: 7304201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7304334:-1
position: 7304334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7303397-7303475:-1:exon

position:7303397:-1
position: 7303397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7303475:-1
position: 7303475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7302019-7302148:-1:exon

position:7302019:-1
position: 7302019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7302148:-1
position: 7302148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7298296-7298443:-1:exon

position:7298296:-1
position: 7298296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7298443:-1
position: 7298443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7291117-7291269:-1:exon

position:7291117:-1
position: 7291117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7291269:-1
position: 7291269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7287159-7287271:-1:exon

position:7287159:-1
position: 7287159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7287271:-1
position: 7287271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7284133-7284282:-1:exon

position:7284133:-1
position: 7284133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7284282:-1
position: 7284282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7283665-7283811:-1:exon

position:7283665:-1
position: 7283665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7283811:-1
position: 7283811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7283043-7283147:-1:exon

position:7283043:-1
position: 7283043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7283147:-1
position: 7283147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7280679-7280745:-1:exon

position:7280679:-1
position: 7280679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7280745:-1
position: 7280745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7279801-7279918:-1:exon

position:7279801:-1
position: 7279801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7279918:-1
position: 7279918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7277124-7277263:-1:exon

position:7277124:-1
position: 7277124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7277263:-1
position: 7277263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7276109-7276249:-1:exon

position:7276109:-1
position: 7276109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7276249:-1
position: 7276249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7273511-7273557:-1:exon

position:7273511:-1
position: 7273511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7273557:-1
position: 7273557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7270997-7271060:-1:exon

position:7270997:-1
position: 7270997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7271060:-1
position: 7271060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7270224-7270333:-1:exon

position:7270224:-1
position: 7270224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7270333:-1
position: 7270333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7269261-7269399:-1:exon

position:7269261:-1
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Cspp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Cspp1
product: centrosome and spindle pole associated protein 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021222073.2
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
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location: region:7266890-7342701:-1
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Cspp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Cspp1
product: centrosome and spindle pole associated protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533236.1
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
location: complement(join(7266891..7267745,7269261..7269399,7270224..7270333,7270997..7271060,7273511..7273557,7276109..7276249,7277124..7277263,7279801..7279918,7280679..7280745,7283043..7283147,7283665..7283811,7284133..7284282,7287159..7287271,7298296..7298443,7302019..7302148,7303397..7303475,7304201..7304334,7306450..7306658,7308299..7308340,7308796..7308853,7310007..7310100,7311682..7311752,7314085..7314171,7322850..7323256,7324076..7324174,7325116..7325196,7329326..7329349,7330333..7330436,7341595..7341697,7343941..7344049,7355567..7355814))
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reference: sequence
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urn:…
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Cspp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Cspp1
product: centrosome and spindle pole associated protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533234.1
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
location: complement(join(7266891..7267745,7269261..7269399,7270224..7270333,7270997..7271060,7273511..7273557,7276109..7276249,7277124..7277263,7279801..7279918,7280679..7280745,7283043..7283147,7283665..7283811,7284133..7284282,7287159..7287271,7291117..7291269,7298296..7298443,7302019..7302148,7303397..7303475,7304201..7304334,7306450..7306658,7308299..7308340,7308796..7308853,7310007..7310100,7311682..7311752,7314085..7314171,7322850..7323256,7324076..7324174,7325116..7325196,7329326..7329349,7330333..7330436,7341595..7341697,7343941..7344049,7355567..7355814))
location: region:7266891-7355814:-1
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Cspp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Cspp1
product: centrosome and spindle pole associated protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029533237.1
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
location: complement(join(7266891..7267745,7269261..7269399,7270224..7270333,7270997..7271060,7273511..7273557,7276109..7276249,7277124..7277263,7279801..7279918,7280679..7280745,7283043..7283147,7283665..7283811,7284133..7284282,7287159..7287271,7298296..7298443,7302019..7302148,7303397..7303475,7304201..7304334,7306450..7306658,7308796..7308853,7310007..7310100,7311682..7311752,7314085..7314171,7322850..7323256,7324076..7324174,7325116..7325196,7329326..7329349,7330333..7330436,7341595..7341697,7343941..7344049,7355567..7355813))
location: region:7266891-7355813:-1
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Cspp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Cspp1
product: centrosome and spindle pole associated protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533238.1
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
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location: region:7266891-7354007:-1
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position:7354007:-1
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Cspp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Cspp1
product: centrosome and spindle pole associated protein 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029533239.1
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
location: complement(join(7266892..7267745,7269261..7269399,7270224..7270333,7270997..7271060,7273511..7273557,7276109..7276249,7277124..7277263,7279801..7279918,7280679..7280745,7283043..7283147,7283665..7283811,7284133..7284282,7287159..7287271,7298296..7298443,7302019..7302148,7303397..7303475,7304201..7304334,7306450..7306658,7308796..7308853,7310007..7310100,7311682..7311752,7314085..7314171,7322850..7323256,7324076..7324174,7325116..7325196,7330333..7330436,7341595..7341697,7343941..7344049,7355567..7355813))
location: region:7266892-7355813:-1
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position:7266892:-1
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Cspp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Cspp1
product: centrosome and spindle pole associated protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029533235.1
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
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location: region:7266892-7355813:-1
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Cspp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Cspp1
product: centrosome and spindle pole associated protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021222071.2
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
location: complement(join(7266903..7267745,7269261..7269399,7270224..7270333,7270997..7271060,7273511..7273557,7276109..7276249,7277124..7277263,7279801..7279918,7280679..7280745,7283043..7283147,7283665..7283811,7284133..7284282,7287159..7287271,7291117..7291269,7298296..7298443,7302019..7302148,7303397..7303475,7304201..7304334,7306450..7306658,7308796..7308853,7310007..7310100,7311682..7311752,7314085..7314171,7322850..7323256,7324076..7324174,7325116..7325196,7330333..7330436,7341595..7341697,7343941..7344049,7355567..7355813))
location: region:7266903-7355813:-1
so has part: feature:7355567-7355813:-1:exon
so has part: feature:7343941-7344049:-1:exon
so has part: feature:7341595-7341697:-1:exon
so has part: feature:7330333-7330436:-1:exon
so has part: feature:7325116-7325196:-1:exon
so has part: feature:7324076-7324174:-1:exon
so has part: feature:7322850-7323256:-1:exon
so has part: feature:7314085-7314171:-1:exon
so has part: feature:7311682-7311752:-1:exon
so has part: feature:7310007-7310100:-1:exon
so has part: feature:7308796-7308853:-1:exon
so has part: feature:7306450-7306658:-1:exon
so has part: feature:7304201-7304334:-1:exon
so has part: feature:7303397-7303475:-1:exon
so has part: feature:7302019-7302148:-1:exon
so has part: feature:7298296-7298443:-1:exon
so has part: feature:7291117-7291269:-1:exon
so has part: feature:7287159-7287271:-1:exon
so has part: feature:7284133-7284282:-1:exon
so has part: feature:7283665-7283811:-1:exon
so has part: feature:7283043-7283147:-1:exon
so has part: feature:7280679-7280745:-1:exon
so has part: feature:7279801-7279918:-1:exon
so has part: feature:7277124-7277263:-1:exon
so has part: feature:7276109-7276249:-1:exon
so has part: feature:7273511-7273557:-1:exon
so has part: feature:7270997-7271060:-1:exon
so has part: feature:7270224-7270333:-1:exon
so has part: feature:7269261-7269399:-1:exon
so has part: feature:7266903-7267745:-1:exon

position:7266903:-1
position: 7266903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7355567-7355813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7343941-7344049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7341595-7341697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7330333-7330436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7325116-7325196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7324076-7324174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7322850-7323256:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7314085-7314171:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7311682-7311752:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7310007-7310100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7308796-7308853:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7306450-7306658:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7304201-7304334:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7303397-7303475:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7302019-7302148:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7298296-7298443:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7291117-7291269:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7287159-7287271:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7284133-7284282:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7283665-7283811:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7283043-7283147:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7280679-7280745:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7279801-7279918:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7277124-7277263:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7276109-7276249:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7273511-7273557:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7270997-7271060:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7270224-7270333:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7269261-7269399:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7266903-7267745:-1:exon

Cspp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Cspp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosome and spindle pole-associated protein 1 isoform X7
translation: MVQPSAPEGGPVALPGRSRPAPPVLRRLRCHRIVCRRELVSGGLCFCECRCFRRNKLFGMLNVSRETEVIYKMADSLDEFIEEQKAKLAKDKAELESDPPYMEMKGKASEKLSENSKILISMAKENIPPNSQQQPKGSLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPVSQGKSGLPSQIQTSYTHSEGPSYEELLRRQEEGLYRQLDGETELRNRRLLKQTNERIGISGAEHQSLSSKAGIPERRARRFNEERMLDRQFCRADRDPDVSEDMDERFRFESDFDRRLLRVYTNDRPHGSRRGNVDGNDVTEEPNTQTSSAENKSVHDNGPSKSADPDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSPDRLKQFSLTPRHFEEMIPPERPRVAFQTPPPPFSAPSIPSVPPVHSAPSHNEDLHSGLGSTLGELVHPRILPVPLNPPPPPLLAPLAPNYRTPYDDAYYFYGARNTLDPNIAYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNEQKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEAEMRLYNPWGKGGGGAPLRDAKGNLISPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFLRFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENITGEETKHLRQPSPVVPALQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQGRLLHLDSDEEIPIRKRERNPMDIFDMARHRVQAPVRRPLPKGLDATTFQNIHDFNELRERDSDTRVDLRLMYPDPPCDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTISTGNVQGHRMPREDTNDFLKNSLLESDSAFIGAYGETYPVTEDSAFPPPSQLPSARERRRNKLKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLNEQQKKATNTDDEGSLVDPDDIMRHLGDDGRNSVATEPWLRPGTSETLKRFMAEQLNEEQQQGPGKPGTFTWQGLSAAHA
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
location: complement(join(7267534..7267745,7269261..7269399,7270224..7270333,7270997..7271060,7273511..7273557,7276109..7276249,7277124..7277263,7279801..7279918,7280679..7280745,7283043..7283147,7283665..7283811,7284133..7284282,7287159..7287271,7298296..7298443,7302019..7302148,7303397..7303475,7304201..7304334,7306450..7306658,7308796..7308853,7310007..7310100,7311682..7311752,7314085..7314171,7322850..7323256,7324076..7324174,7325116..7325196,7330333..7330436,7341595..7341697,7343941..7344049,7355567..7355772))
location: region:7267534-7355772:-1
so has part: feature:7355567-7355772:-1:exon
so has part: feature:7343941-7344049:-1:exon
so has part: feature:7341595-7341697:-1:exon
so has part: feature:7330333-7330436:-1:exon
so has part: feature:7325116-7325196:-1:exon
so has part: feature:7324076-7324174:-1:exon
so has part: feature:7322850-7323256:-1:exon
so has part: feature:7314085-7314171:-1:exon
so has part: feature:7311682-7311752:-1:exon
so has part: feature:7310007-7310100:-1:exon
so has part: feature:7308796-7308853:-1:exon
so has part: feature:7306450-7306658:-1:exon
so has part: feature:7304201-7304334:-1:exon
so has part: feature:7303397-7303475:-1:exon
so has part: feature:7302019-7302148:-1:exon
so has part: feature:7298296-7298443:-1:exon
so has part: feature:7287159-7287271:-1:exon
so has part: feature:7284133-7284282:-1:exon
so has part: feature:7283665-7283811:-1:exon
so has part: feature:7283043-7283147:-1:exon
so has part: feature:7280679-7280745:-1:exon
so has part: feature:7279801-7279918:-1:exon
so has part: feature:7277124-7277263:-1:exon
so has part: feature:7276109-7276249:-1:exon
so has part: feature:7273511-7273557:-1:exon
so has part: feature:7270997-7271060:-1:exon
so has part: feature:7270224-7270333:-1:exon
so has part: feature:7269261-7269399:-1:exon
so has part: feature:7267534-7267745:-1:exon

XP_029389099.1
type: Protein
SIO_000068: ncbiprotein

position:7267534:-1
position: 7267534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7355772:-1
position: 7355772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7355567-7355772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7343941-7344049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7341595-7341697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7330333-7330436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7325116-7325196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7324076-7324174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7322850-7323256:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7314085-7314171:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7311682-7311752:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7310007-7310100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7308796-7308853:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7306450-7306658:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7304201-7304334:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7303397-7303475:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7302019-7302148:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7298296-7298443:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7287159-7287271:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7284133-7284282:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7283665-7283811:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7283043-7283147:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7280679-7280745:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7279801-7279918:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7277124-7277263:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7276109-7276249:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7273511-7273557:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7270997-7271060:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7270224-7270333:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7269261-7269399:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7267534-7267745:-1:exon

Cspp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Cspp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosome and spindle pole-associated protein 1 isoform X3
translation: MVQPSAPEGGPVALPGRSRPAPPVLRRLRCHRIVCRRELVSGGLCFCECRCFRRNKLFGMLNVSRETEVIYKMADSLDEFIEEQKAKLAKDKAELESDPPYMEMKGKASEKLSENSKILISMAKENIPPNSQQQPKGSLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPVSQGKSGLPSQIQTSYTHSEGPSYEELLRRQEEGLYRQLDGETELRNRRLLKQTNERIGISGAEHQSLSSKAGIPERRARRFNEERMLDRQFCRADRDPDVSEDMDERFRFESDFDRRLLRVYTNDRPHGSRRGNVDGNDVTEEPNTQTSSAENKSVHDNGPSKSADPDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSPDRLKQFSLTPRHFEEMIPPERPRVAFQTPPPPFSAPSIPSVPPVHSAPSHNEDLHSGLGSTLGELVHPRILPVPLNPPPPPLLAPLAPNYRTPYDDAYYFYGARNTLDPNIAYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNEQKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEAEMRLYNPWGKGGGGAPLRDAKGNLITDLNRMHRQNIDAYHNPDARTYEDKRAVVSIDQNLATSNAENLEDSANKNSGPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFLRFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENITGEETKHLRQPSPVVPALQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQGRLLHLDSDEEIPIRKRERNPMDIFDMARHRVQAPVRRPLPKGLDATTFQNIHDFNELRERDSDTRVDLRLMYPDPPCDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTISTGNVQGHRMPREDTNDFLKNSLLESDSAFIGAYGETYPVTEDSAFPPPSQLPSARERRRNKLKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLNEQQKKATNTDDEGSLVDPDDIMRHLGDDGRNSVATEPWLRPGTSETLKRFMAEQLNEEQQQGPGKPGTFTWQGLSAAHA
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
location: complement(join(7267534..7267745,7269261..7269399,7270224..7270333,7270997..7271060,7273511..7273557,7276109..7276249,7277124..7277263,7279801..7279918,7280679..7280745,7283043..7283147,7283665..7283811,7284133..7284282,7287159..7287271,7291117..7291269,7298296..7298443,7302019..7302148,7303397..7303475,7304201..7304334,7306450..7306658,7308796..7308853,7310007..7310100,7311682..7311752,7314085..7314171,7322850..7323256,7324076..7324174,7325116..7325196,7330333..7330436,7341595..7341697,7343941..7344049,7355567..7355772))
location: region:7267534-7355772:-1
so has part: feature:7355567-7355772:-1:exon
so has part: feature:7343941-7344049:-1:exon
so has part: feature:7341595-7341697:-1:exon
so has part: feature:7330333-7330436:-1:exon
so has part: feature:7325116-7325196:-1:exon
so has part: feature:7324076-7324174:-1:exon
so has part: feature:7322850-7323256:-1:exon
so has part: feature:7314085-7314171:-1:exon
so has part: feature:7311682-7311752:-1:exon
so has part: feature:7310007-7310100:-1:exon
so has part: feature:7308796-7308853:-1:exon
so has part: feature:7306450-7306658:-1:exon
so has part: feature:7304201-7304334:-1:exon
so has part: feature:7303397-7303475:-1:exon
so has part: feature:7302019-7302148:-1:exon
so has part: feature:7298296-7298443:-1:exon
so has part: feature:7291117-7291269:-1:exon
so has part: feature:7287159-7287271:-1:exon
so has part: feature:7284133-7284282:-1:exon
so has part: feature:7283665-7283811:-1:exon
so has part: feature:7283043-7283147:-1:exon
so has part: feature:7280679-7280745:-1:exon
so has part: feature:7279801-7279918:-1:exon
so has part: feature:7277124-7277263:-1:exon
so has part: feature:7276109-7276249:-1:exon
so has part: feature:7273511-7273557:-1:exon
so has part: feature:7270997-7271060:-1:exon
so has part: feature:7270224-7270333:-1:exon
so has part: feature:7269261-7269399:-1:exon
so has part: feature:7267534-7267745:-1:exon

XP_021077730.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7355567-7355772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7343941-7344049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7341595-7341697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7330333-7330436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7325116-7325196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7324076-7324174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7322850-7323256:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7314085-7314171:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7311682-7311752:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7310007-7310100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7308796-7308853:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7306450-7306658:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7304201-7304334:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7303397-7303475:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7302019-7302148:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7298296-7298443:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7291117-7291269:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7287159-7287271:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7284133-7284282:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7283665-7283811:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7283043-7283147:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7280679-7280745:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7279801-7279918:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7277124-7277263:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7276109-7276249:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7273511-7273557:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7270997-7271060:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7270224-7270333:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7269261-7269399:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7267534-7267745:-1:exon

Cspp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Cspp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosome and spindle pole-associated protein 1 isoform X8
translation: MVQPSAPEGGPVALPGRSRPAPPVLRRLRCHRIVCRRELVSGGLCFCECRCFRRNKLFGMLNVSRETEVIYKMADSLDEFIEEQKAKLAKDKAELESDPPYMEMKGKASEKLSENSKILISMAKENIPPNSQQQPKGSLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQGITQAKRKKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPVSQGKSGLPSQIQTSYTHSEGPSYEELLRRQEEGLYRQLDGETELRNRRLLKQTNERIGISGAEHQSLSSKAGIPERRARRFNEERMLDRQFCRADRDPDVSEDMDERFRFESDFDRRLLRVYTNDRILPVPLNPPPPPLLAPLAPNYRTPYDDAYYFYGARNTLDPNIAYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNEQKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEAEMRLYNPWGKGGGGAPLRDAKGNLITDLNRMHRQNIDAYHNPDARTYEDKRAVVSIDQNLATSNAENLEDSANKNSGPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFLRFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENITGEETKHLRQPSPVVPALQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQGRLLHLDSDEEIPIRKRERNPMDIFDMARHRVQAPVRRPLPKGLDATTFQNIHDFNELRERDSDTRVDLRLMYPDPPCDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTISTGNVQGHRMPREDTNDFLKNSLLESDSAFIGAYGETYPVTEDSAFPPPSQLPSARERRRNKLKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLNEQQKKATNTDDEGSLVDPDDIMRHLGDDGRNSVATEPWLRPGTSETLKRFMAEQLNEEQQQGPGKPGTFTWQGLSAAHA
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
location: complement(join(7267534..7267745,7269261..7269399,7270224..7270333,7270997..7271060,7273511..7273557,7276109..7276249,7277124..7277263,7279801..7279918,7280679..7280745,7283043..7283147,7283665..7283811,7284133..7284282,7287159..7287271,7291117..7291269,7298296..7298443,7302019..7302148,7303397..7303475,7304201..7304334,7322850..7323256,7324076..7324174,7325116..7325196,7329326..7329349,7330333..7330436,7341595..7341697,7343941..7344049,7355567..7355772))
location: region:7267534-7355772:-1
so has part: feature:7355567-7355772:-1:exon
so has part: feature:7343941-7344049:-1:exon
so has part: feature:7341595-7341697:-1:exon
so has part: feature:7330333-7330436:-1:exon
so has part: feature:7329326-7329349:-1:exon
so has part: feature:7325116-7325196:-1:exon
so has part: feature:7324076-7324174:-1:exon
so has part: feature:7322850-7323256:-1:exon
so has part: feature:7304201-7304334:-1:exon
so has part: feature:7303397-7303475:-1:exon
so has part: feature:7302019-7302148:-1:exon
so has part: feature:7298296-7298443:-1:exon
so has part: feature:7291117-7291269:-1:exon
so has part: feature:7287159-7287271:-1:exon
so has part: feature:7284133-7284282:-1:exon
so has part: feature:7283665-7283811:-1:exon
so has part: feature:7283043-7283147:-1:exon
so has part: feature:7280679-7280745:-1:exon
so has part: feature:7279801-7279918:-1:exon
so has part: feature:7277124-7277263:-1:exon
so has part: feature:7276109-7276249:-1:exon
so has part: feature:7273511-7273557:-1:exon
so has part: feature:7270997-7271060:-1:exon
so has part: feature:7270224-7270333:-1:exon
so has part: feature:7269261-7269399:-1:exon
so has part: feature:7267534-7267745:-1:exon

XP_029389100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7355567-7355772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7343941-7344049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7341595-7341697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7330333-7330436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7329326-7329349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7325116-7325196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7324076-7324174:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7322850-7323256:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7304201-7304334:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7303397-7303475:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7302019-7302148:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7298296-7298443:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7291117-7291269:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7287159-7287271:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7284133-7284282:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7283665-7283811:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7283043-7283147:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7280679-7280745:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7279801-7279918:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7277124-7277263:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7276109-7276249:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7273511-7273557:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7270997-7271060:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7270224-7270333:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7269261-7269399:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7267534-7267745:-1:exon

Cspp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Cspp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosome and spindle pole-associated protein 1 isoform X5
translation: MVQPSAPEGGPVALPGRSRPAPPVLRRLRCHRIVCRRELVSGGLCFCECRCFRRNKLFGMLNVSRETEVIYKMADSLDEFIEEQKAKLAKDKAELESDPPYMEMKGKASEKLSENSKILISMAKENIPPNSQQQPKGSLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQGITQAKRKKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPVSQGKSGLPSQIQTSYTHSEGPSYEELLRRQEEGLYRQLDGETELRNRRLLKQTNERIGISGAEHQSLSSKAGIPERRARRFNEERMLDRQFCRADRDPDVSEDMDERFRFESDFDRRLLRVYTNDRPHGSRRGNVDGNDVTEEPNTQTSSAENKSVHDNGPSKSADPDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSPDRLKQFSLTPRHFEEMIPPERPRVAFQTPPPPFSAPSIPSVPPVHSAPSHNEDLHSGLGSTLGELVHPRILPVPLNPPPPPLLAPLAPNYRTPYDDAYYFYGARNTLDPNIAYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNEQKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEAEMRLYNPWGKGGGGAPLRDAKGNLISPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFLRFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENITGEETKHLRQPSPVVPALQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQGRLLHLDSDEEIPIRKRERNPMDIFDMARHRVQAPVRRPLPKGLDATTFQNIHDFNELRERDSDTRVDLRLMYPDPPCDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTISTGNVQGHRMPREDTNDFLKNSLLESDSAFIGAYGETYPVTEDSAFPPPSQLPSARERRRNKLKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLNEQQKKATNTDDEGSLVDPDDIMRHLGDDGRNSVATEPWLRPGTSETLKRFMAEQLNEEQQQGPGKPGTFTWQGLSAAHA
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
location: complement(join(7267534..7267745,7269261..7269399,7270224..7270333,7270997..7271060,7273511..7273557,7276109..7276249,7277124..7277263,7279801..7279918,7280679..7280745,7283043..7283147,7283665..7283811,7284133..7284282,7287159..7287271,7298296..7298443,7302019..7302148,7303397..7303475,7304201..7304334,7306450..7306658,7308796..7308853,7310007..7310100,7311682..7311752,7314085..7314171,7322850..7323256,7324076..7324174,7325116..7325196,7329326..7329349,7330333..7330436,7341595..7341697,7343941..7344049,7355567..7355772))
location: region:7267534-7355772:-1
so has part: feature:7355567-7355772:-1:exon
so has part: feature:7343941-7344049:-1:exon
so has part: feature:7341595-7341697:-1:exon
so has part: feature:7330333-7330436:-1:exon
so has part: feature:7329326-7329349:-1:exon
so has part: feature:7325116-7325196:-1:exon
so has part: feature:7324076-7324174:-1:exon
so has part: feature:7322850-7323256:-1:exon
so has part: feature:7314085-7314171:-1:exon
so has part: feature:7311682-7311752:-1:exon
so has part: feature:7310007-7310100:-1:exon
so has part: feature:7308796-7308853:-1:exon
so has part: feature:7306450-7306658:-1:exon
so has part: feature:7304201-7304334:-1:exon
so has part: feature:7303397-7303475:-1:exon
so has part: feature:7302019-7302148:-1:exon
so has part: feature:7298296-7298443:-1:exon
so has part: feature:7287159-7287271:-1:exon
so has part: feature:7284133-7284282:-1:exon
so has part: feature:7283665-7283811:-1:exon
so has part: feature:7283043-7283147:-1:exon
so has part: feature:7280679-7280745:-1:exon
so has part: feature:7279801-7279918:-1:exon
so has part: feature:7277124-7277263:-1:exon
so has part: feature:7276109-7276249:-1:exon
so has part: feature:7273511-7273557:-1:exon
so has part: feature:7270997-7271060:-1:exon
so has part: feature:7270224-7270333:-1:exon
so has part: feature:7269261-7269399:-1:exon
so has part: feature:7267534-7267745:-1:exon

XP_029389097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7355567-7355772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7343941-7344049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7341595-7341697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7330333-7330436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7329326-7329349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7325116-7325196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7324076-7324174:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7322850-7323256:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7314085-7314171:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7311682-7311752:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7310007-7310100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7308796-7308853:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7306450-7306658:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7304201-7304334:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7303397-7303475:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7302019-7302148:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7298296-7298443:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7287159-7287271:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7284133-7284282:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7283665-7283811:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7283043-7283147:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7280679-7280745:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7279801-7279918:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7277124-7277263:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7276109-7276249:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7273511-7273557:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7270997-7271060:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7270224-7270333:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7269261-7269399:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7267534-7267745:-1:exon

Cspp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Cspp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosome and spindle pole-associated protein 1 isoform X2
translation: MVQPSAPEGGPVALPGRSRPAPPVLRRLRCHRIVCRRELVSGGLCFCECRCFRRNKLFGMLNVSRETEVIYKMADSLDEFIEEQKAKLAKDKAELESDPPYMEMKGKASEKLSENSKILISMAKENIPPNSQQQPKGSLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQGITQAKRKKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPVSQGKSGLPSQIQTSYTHSEGPSYEELLRRQEEGLYRQLDGETELRNRRLLKQTNERIGISGAEHQSLSSKAGIPERRARRFNEERMLDRQFCRADRDPDVSEDMDERFRFESDFDRRLLRVYTNDRPHGSRRGNVDGNDVTEEPNTQTSSAENKSVHDNGPSKSADPDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSPDRLKQFSLTPRHFEEMIPPERPRVAFQTPPPPFSAPSIPSVPPVHSAPSHNEDLHSGLGSTLGELVHPRILPVPLNPPPPPLLAPLAPNYRTPYDDAYYFYGARNTLDPNIAYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNEQKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEAEMRLYNPWGKGGGGAPLRDAKGNLITDLNRMHRQNIDAYHNPDARTYEDKRAVVSIDQNLATSNAENLEDSANKNSGPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFLRFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENITGEETKHLRQPSPVVPALQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQGRLLHLDSDEEIPIRKRERNPMDIFDMARHRVQAPVRRPLPKGLDATTFQNIHDFNELRERDSDTRVDLRLMYPDPPCDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTISTGNVQGHRMPREDTNDFLKNSLLESDSAFIGAYGETYPVTEDSAFPPPSQLPSARERRRNKLKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLNEQQKKATNTDDEGSLVDPDDIMRHLGDDGRNSVATEPWLRPGTSETLKRFMAEQLNEEQQQGPGKPGTFTWQGLSAAHA
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
location: complement(join(7267534..7267745,7269261..7269399,7270224..7270333,7270997..7271060,7273511..7273557,7276109..7276249,7277124..7277263,7279801..7279918,7280679..7280745,7283043..7283147,7283665..7283811,7284133..7284282,7287159..7287271,7291117..7291269,7298296..7298443,7302019..7302148,7303397..7303475,7304201..7304334,7306450..7306658,7308796..7308853,7310007..7310100,7311682..7311752,7314085..7314171,7322850..7323256,7324076..7324174,7325116..7325196,7329326..7329349,7330333..7330436,7341595..7341697,7343941..7344049,7355567..7355772))
location: region:7267534-7355772:-1
so has part: feature:7355567-7355772:-1:exon
so has part: feature:7343941-7344049:-1:exon
so has part: feature:7341595-7341697:-1:exon
so has part: feature:7330333-7330436:-1:exon
so has part: feature:7329326-7329349:-1:exon
so has part: feature:7325116-7325196:-1:exon
so has part: feature:7324076-7324174:-1:exon
so has part: feature:7322850-7323256:-1:exon
so has part: feature:7314085-7314171:-1:exon
so has part: feature:7311682-7311752:-1:exon
so has part: feature:7310007-7310100:-1:exon
so has part: feature:7308796-7308853:-1:exon
so has part: feature:7306450-7306658:-1:exon
so has part: feature:7304201-7304334:-1:exon
so has part: feature:7303397-7303475:-1:exon
so has part: feature:7302019-7302148:-1:exon
so has part: feature:7298296-7298443:-1:exon
so has part: feature:7291117-7291269:-1:exon
so has part: feature:7287159-7287271:-1:exon
so has part: feature:7284133-7284282:-1:exon
so has part: feature:7283665-7283811:-1:exon
so has part: feature:7283043-7283147:-1:exon
so has part: feature:7280679-7280745:-1:exon
so has part: feature:7279801-7279918:-1:exon
so has part: feature:7277124-7277263:-1:exon
so has part: feature:7276109-7276249:-1:exon
so has part: feature:7273511-7273557:-1:exon
so has part: feature:7270997-7271060:-1:exon
so has part: feature:7270224-7270333:-1:exon
so has part: feature:7269261-7269399:-1:exon
so has part: feature:7267534-7267745:-1:exon

XP_029389095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7355567-7355772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7343941-7344049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7341595-7341697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7330333-7330436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7329326-7329349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7325116-7325196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7324076-7324174:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7322850-7323256:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7314085-7314171:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7311682-7311752:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7310007-7310100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7308796-7308853:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7306450-7306658:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7304201-7304334:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7303397-7303475:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7302019-7302148:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7298296-7298443:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7291117-7291269:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7287159-7287271:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7284133-7284282:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7283665-7283811:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7283043-7283147:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7280679-7280745:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7279801-7279918:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7277124-7277263:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7276109-7276249:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7273511-7273557:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7270997-7271060:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7270224-7270333:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7269261-7269399:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7267534-7267745:-1:exon

Cspp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Cspp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosome and spindle pole-associated protein 1 isoform X4
translation: MVQPSAPEGGPVALPGRSRPAPPVLRRLRCHRIVCRRELVSGGLCFCECRCFRRNKLFGMLNVSRETEVIYKMADSLDEFIEEQKAKLAKDKAELESDPPYMEMKGKASEKLSENSKILISMAKENIPPNSQQQPKGSLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQGITQAKRKKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPVSQGKSGLPSQIQTSYTHSEGPSYEELLRRQEEGLYRQLDGETELRNRRLLKQTNERIGISGAEHQSLSSKAGIPERRARRFNEERMLDRQFCRADRDPDVSEDMDERFRFESDFDRRLLRVYTNDRPHGSRRGNVDGNDVTEEPNTQTSSAENKSVHDNGPSKSADPDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSWNGSHPSLQLSKEEPDRLKQFSLTPRHFEEMIPPERPRVAFQTPPPPFSAPSIPSVPPVHSAPSHNEDLHSGLGSTLGELVHPRILPVPLNPPPPPLLAPLAPNYRTPYDDAYYFYGARNTLDPNIAYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNEQKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEAEMRLYNPWGKGGGGAPLRDAKGNLISPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFLRFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENITGEETKHLRQPSPVVPALQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQGRLLHLDSDEEIPIRKRERNPMDIFDMARHRVQAPVRRPLPKGLDATTFQNIHDFNELRERDSDTRVDLRLMYPDPPCDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTISTGNVQGHRMPREDTNDFLKNSLLESDSAFIGAYGETYPVTEDSAFPPPSQLPSARERRRNKLKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLNEQQKKATNTDDEGSLVDPDDIMRHLGDDGRNSVATEPWLRPGTSETLKRFMAEQLNEEQQQGPGKPGTFTWQGLSAAHA
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
location: complement(join(7267534..7267745,7269261..7269399,7270224..7270333,7270997..7271060,7273511..7273557,7276109..7276249,7277124..7277263,7279801..7279918,7280679..7280745,7283043..7283147,7283665..7283811,7284133..7284282,7287159..7287271,7298296..7298443,7302019..7302148,7303397..7303475,7304201..7304334,7306450..7306658,7308299..7308340,7308796..7308853,7310007..7310100,7311682..7311752,7314085..7314171,7322850..7323256,7324076..7324174,7325116..7325196,7329326..7329349,7330333..7330436,7341595..7341697,7343941..7344049,7355567..7355772))
location: region:7267534-7355772:-1
so has part: feature:7355567-7355772:-1:exon
so has part: feature:7343941-7344049:-1:exon
so has part: feature:7341595-7341697:-1:exon
so has part: feature:7330333-7330436:-1:exon
so has part: feature:7329326-7329349:-1:exon
so has part: feature:7325116-7325196:-1:exon
so has part: feature:7324076-7324174:-1:exon
so has part: feature:7322850-7323256:-1:exon
so has part: feature:7314085-7314171:-1:exon
so has part: feature:7311682-7311752:-1:exon
so has part: feature:7310007-7310100:-1:exon
so has part: feature:7308796-7308853:-1:exon
so has part: feature:7308299-7308340:-1:exon
so has part: feature:7306450-7306658:-1:exon
so has part: feature:7304201-7304334:-1:exon
so has part: feature:7303397-7303475:-1:exon
so has part: feature:7302019-7302148:-1:exon
so has part: feature:7298296-7298443:-1:exon
so has part: feature:7287159-7287271:-1:exon
so has part: feature:7284133-7284282:-1:exon
so has part: feature:7283665-7283811:-1:exon
so has part: feature:7283043-7283147:-1:exon
so has part: feature:7280679-7280745:-1:exon
so has part: feature:7279801-7279918:-1:exon
so has part: feature:7277124-7277263:-1:exon
so has part: feature:7276109-7276249:-1:exon
so has part: feature:7273511-7273557:-1:exon
so has part: feature:7270997-7271060:-1:exon
so has part: feature:7270224-7270333:-1:exon
so has part: feature:7269261-7269399:-1:exon
so has part: feature:7267534-7267745:-1:exon

XP_029389096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7355567-7355772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7343941-7344049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7341595-7341697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7330333-7330436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7329326-7329349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7325116-7325196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7324076-7324174:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7322850-7323256:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7314085-7314171:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7311682-7311752:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7310007-7310100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7308796-7308853:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7308299-7308340:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7306450-7306658:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7304201-7304334:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7303397-7303475:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7302019-7302148:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7298296-7298443:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7287159-7287271:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7284133-7284282:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7283665-7283811:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7283043-7283147:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7280679-7280745:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7279801-7279918:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7277124-7277263:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7276109-7276249:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7273511-7273557:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7270997-7271060:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7270224-7270333:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7269261-7269399:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7267534-7267745:-1:exon

Cspp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Cspp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosome and spindle pole-associated protein 1 isoform X1
translation: MVQPSAPEGGPVALPGRSRPAPPVLRRLRCHRIVCRRELVSGGLCFCECRCFRRNKLFGMLNVSRETEVIYKMADSLDEFIEEQKAKLAKDKAELESDPPYMEMKGKASEKLSENSKILISMAKENIPPNSQQQPKGSLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQGITQAKRKKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPVSQGKSGLPSQIQTSYTHSEGPSYEELLRRQEEGLYRQLDGETELRNRRLLKQTNERIGISGAEHQSLSSKAGIPERRARRFNEERMLDRQFCRADRDPDVSEDMDERFRFESDFDRRLLRVYTNDRPHGSRRGNVDGNDVTEEPNTQTSSAENKSVHDNGPSKSADPDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSWNGSHPSLQLSKEEPDRLKQFSLTPRHFEEMIPPERPRVAFQTPPPPFSAPSIPSVPPVHSAPSHNEDLHSGLGSTLGELVHPRILPVPLNPPPPPLLAPLAPNYRTPYDDAYYFYGARNTLDPNIAYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNEQKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEAEMRLYNPWGKGGGGAPLRDAKGNLITDLNRMHRQNIDAYHNPDARTYEDKRAVVSIDQNLATSNAENLEDSANKNSGPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFLRFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENITGEETKHLRQPSPVVPALQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQGRLLHLDSDEEIPIRKRERNPMDIFDMARHRVQAPVRRPLPKGLDATTFQNIHDFNELRERDSDTRVDLRLMYPDPPCDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTISTGNVQGHRMPREDTNDFLKNSLLESDSAFIGAYGETYPVTEDSAFPPPSQLPSARERRRNKLKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLNEQQKKATNTDDEGSLVDPDDIMRHLGDDGRNSVATEPWLRPGTSETLKRFMAEQLNEEQQQGPGKPGTFTWQGLSAAHA
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
location: complement(join(7267534..7267745,7269261..7269399,7270224..7270333,7270997..7271060,7273511..7273557,7276109..7276249,7277124..7277263,7279801..7279918,7280679..7280745,7283043..7283147,7283665..7283811,7284133..7284282,7287159..7287271,7291117..7291269,7298296..7298443,7302019..7302148,7303397..7303475,7304201..7304334,7306450..7306658,7308299..7308340,7308796..7308853,7310007..7310100,7311682..7311752,7314085..7314171,7322850..7323256,7324076..7324174,7325116..7325196,7329326..7329349,7330333..7330436,7341595..7341697,7343941..7344049,7355567..7355772))
location: region:7267534-7355772:-1
so has part: feature:7355567-7355772:-1:exon
so has part: feature:7343941-7344049:-1:exon
so has part: feature:7341595-7341697:-1:exon
so has part: feature:7330333-7330436:-1:exon
so has part: feature:7329326-7329349:-1:exon
so has part: feature:7325116-7325196:-1:exon
so has part: feature:7324076-7324174:-1:exon
so has part: feature:7322850-7323256:-1:exon
so has part: feature:7314085-7314171:-1:exon
so has part: feature:7311682-7311752:-1:exon
so has part: feature:7310007-7310100:-1:exon
so has part: feature:7308796-7308853:-1:exon
so has part: feature:7308299-7308340:-1:exon
so has part: feature:7306450-7306658:-1:exon
so has part: feature:7304201-7304334:-1:exon
so has part: feature:7303397-7303475:-1:exon
so has part: feature:7302019-7302148:-1:exon
so has part: feature:7298296-7298443:-1:exon
so has part: feature:7291117-7291269:-1:exon
so has part: feature:7287159-7287271:-1:exon
so has part: feature:7284133-7284282:-1:exon
so has part: feature:7283665-7283811:-1:exon
so has part: feature:7283043-7283147:-1:exon
so has part: feature:7280679-7280745:-1:exon
so has part: feature:7279801-7279918:-1:exon
so has part: feature:7277124-7277263:-1:exon
so has part: feature:7276109-7276249:-1:exon
so has part: feature:7273511-7273557:-1:exon
so has part: feature:7270997-7271060:-1:exon
so has part: feature:7270224-7270333:-1:exon
so has part: feature:7269261-7269399:-1:exon
so has part: feature:7267534-7267745:-1:exon

XP_029389094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7355567-7355772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7343941-7344049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7341595-7341697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7330333-7330436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7329326-7329349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7325116-7325196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7324076-7324174:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7322850-7323256:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7314085-7314171:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7311682-7311752:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7310007-7310100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7308796-7308853:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7308299-7308340:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7306450-7306658:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7304201-7304334:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7303397-7303475:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7302019-7302148:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7298296-7298443:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7291117-7291269:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7287159-7287271:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7284133-7284282:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7283665-7283811:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7283043-7283147:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7280679-7280745:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7279801-7279918:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7277124-7277263:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7276109-7276249:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7273511-7273557:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7270997-7271060:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7270224-7270333:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7269261-7269399:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7267534-7267745:-1:exon

Cspp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Cspp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosome and spindle pole-associated protein 1 isoform X6
translation: MADSLDEFIEEQKAKLAKDKAELESDPPYMEMKGKASEKLSENSKILISMAKENIPPNSQQQPKGSLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQGITQAKRKKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPVSQGKSGLPSQIQTSYTHSEGPSYEELLRRQEEGLYRQLDGETELRNRRLLKQTNERIGISGAEHQSLSSKAGIPERRARRFNEERMLDRQFCRADRDPDVSEDMDERFRFESDFDRRLLRVYTNDRPHGSRRGNVDGNDVTEEPNTQTSSAENKSVHDNGPSKSADPDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSWNGSHPSLQLSKEEPDRLKQFSLTPRHFEEMIPPERPRVAFQTPPPPFSAPSIPSVPPVHSAPSHNEDLHSGLGSTLGELVHPRILPVPLNPPPPPLLAPLAPNYRTPYDDAYYFYGARNTLDPNIAYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNEQKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEAEMRLYNPWGKGGGGAPLRDAKGNLITDLNRMHRQNIDAYHNPDARTYEDKRAVVSIDQNLATSNAENLEDSANKNSGPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFLRFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENITGEETKHLRQPSPVVPALQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQGRLLHLDSDEEIPIRKRERNPMDIFDMARHRVQAPVRRPLPKGLDATTFQNIHDFNELRERDSDTRVDLRLMYPDPPCDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTISTGNVQGHRMPREDTNDFLKNSLLESDSAFIGAYGETYPVTEDSAFPPPSQLPSARERRRNKLKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLNEQQKKATNTDDEGSLVDPDDIMRHLGDDGRNSVATEPWLRPGTSETLKRFMAEQLNEEQQQGPGKPGTFTWQGLSAAHA
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
location: complement(join(7267534..7267745,7269261..7269399,7270224..7270333,7270997..7271060,7273511..7273557,7276109..7276249,7277124..7277263,7279801..7279918,7280679..7280745,7283043..7283147,7283665..7283811,7284133..7284282,7287159..7287271,7291117..7291269,7298296..7298443,7302019..7302148,7303397..7303475,7304201..7304334,7306450..7306658,7308299..7308340,7308796..7308853,7310007..7310100,7311682..7311752,7314085..7314171,7322850..7323256,7324076..7324174,7325116..7325196,7329326..7329349,7330333..7330436,7341595..7341697,7343941..7344039))
location: region:7267534-7344039:-1
so has part: feature:7343941-7344039:-1:exon
so has part: feature:7341595-7341697:-1:exon
so has part: feature:7330333-7330436:-1:exon
so has part: feature:7329326-7329349:-1:exon
so has part: feature:7325116-7325196:-1:exon
so has part: feature:7324076-7324174:-1:exon
so has part: feature:7322850-7323256:-1:exon
so has part: feature:7314085-7314171:-1:exon
so has part: feature:7311682-7311752:-1:exon
so has part: feature:7310007-7310100:-1:exon
so has part: feature:7308796-7308853:-1:exon
so has part: feature:7308299-7308340:-1:exon
so has part: feature:7306450-7306658:-1:exon
so has part: feature:7304201-7304334:-1:exon
so has part: feature:7303397-7303475:-1:exon
so has part: feature:7302019-7302148:-1:exon
so has part: feature:7298296-7298443:-1:exon
so has part: feature:7291117-7291269:-1:exon
so has part: feature:7287159-7287271:-1:exon
so has part: feature:7284133-7284282:-1:exon
so has part: feature:7283665-7283811:-1:exon
so has part: feature:7283043-7283147:-1:exon
so has part: feature:7280679-7280745:-1:exon
so has part: feature:7279801-7279918:-1:exon
so has part: feature:7277124-7277263:-1:exon
so has part: feature:7276109-7276249:-1:exon
so has part: feature:7273511-7273557:-1:exon
so has part: feature:7270997-7271060:-1:exon
so has part: feature:7270224-7270333:-1:exon
so has part: feature:7269261-7269399:-1:exon
so has part: feature:7267534-7267745:-1:exon

XP_029389098.1
type: Protein
SIO_000068: ncbiprotein

position:7344039:-1
position: 7344039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7343941-7344039:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7341595-7341697:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7330333-7330436:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7329326-7329349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7325116-7325196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7324076-7324174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7322850-7323256:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7314085-7314171:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7311682-7311752:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7310007-7310100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7308796-7308853:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7308299-7308340:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7306450-7306658:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7304201-7304334:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7303397-7303475:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7302019-7302148:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7298296-7298443:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7291117-7291269:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7287159-7287271:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7284133-7284282:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7283665-7283811:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7283043-7283147:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7280679-7280745:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7279801-7279918:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7277124-7277263:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7276109-7276249:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7273511-7273557:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7270997-7271060:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7270224-7270333:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7269261-7269399:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7267534-7267745:-1:exon

Cspp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Cspp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosome and spindle pole-associated protein 1 isoform X9
translation: MDLNCYPHLVAGHAHSYLIWRGKASEKLSENSKILISMAKENIPPNSQQQPKGSLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQGITQAKRKKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPVSQGKSGLPSQIQTSYTHSEGPSYEELLRRQEEGLYRQLDGETELRNRRLLKQTNERIGISGAEHQSLSSKAGIPERRARRFNEERMLDRQFCRADRDPDVSEDMDERFRFESDFDRRLLRVYTNDRPHGSRRGNVDGNDVTEEPNTQTSSAENKSVHDNGPSKSADPDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSPDRLKQFSLTPRHFEEMIPPERPRVAFQTPPPPFSAPSIPSVPPVHSAPSHNEDLHSGLGSTLGELVHPRILPVPLNPPPPPLLAPLAPNYRTPYDDAYYFYGARNTLDPNIAYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNEQKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEAEMRLYNPWGKGGGGAPLRDAKGNLISPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFLRFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENITGEETKHLRQPSPVVPALQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQGRLLHLDSDEEIPIRKRERNPMDIFDMARHRVQAPVRRPLPKGLDATTFQNIHDFNELRERDSDTRVDLRLMYPDPPCDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTISTGNVQGHRMPREDTNDFLKNSLLESDSAFIGAYGETYPVTEDSAFPPPSQLPSARERRRNKLKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLNEQQKKATNTDDEGSLVDPDDIMRHLGDDGRNSVATEPWLRPGTSETLKRFMAEQLNEEQQQGPGKPGTFTWQGLSAAHA
SIO_010081: Cspp1
subclass of: SO_0000673
so part of: Cspp1
location: complement(join(7267534..7267745,7269261..7269399,7270224..7270333,7270997..7271060,7273511..7273557,7276109..7276249,7277124..7277263,7279801..7279918,7280679..7280745,7283043..7283147,7283665..7283811,7284133..7284282,7287159..7287271,7298296..7298443,7302019..7302148,7303397..7303475,7304201..7304334,7306450..7306658,7308796..7308853,7310007..7310100,7311682..7311752,7314085..7314171,7322850..7323256,7324076..7324174,7325116..7325196,7329326..7329349,7330333..7330436,7341595..7341697,7342565..7342627))
location: region:7267534-7342627:-1
so has part: feature:7342565-7342627:-1:exon
so has part: feature:7341595-7341697:-1:exon
so has part: feature:7330333-7330436:-1:exon
so has part: feature:7329326-7329349:-1:exon
so has part: feature:7325116-7325196:-1:exon
so has part: feature:7324076-7324174:-1:exon
so has part: feature:7322850-7323256:-1:exon
so has part: feature:7314085-7314171:-1:exon
so has part: feature:7311682-7311752:-1:exon
so has part: feature:7310007-7310100:-1:exon
so has part: feature:7308796-7308853:-1:exon
so has part: feature:7306450-7306658:-1:exon
so has part: feature:7304201-7304334:-1:exon
so has part: feature:7303397-7303475:-1:exon
so has part: feature:7302019-7302148:-1:exon
so has part: feature:7298296-7298443:-1:exon
so has part: feature:7287159-7287271:-1:exon
so has part: feature:7284133-7284282:-1:exon
so has part: feature:7283665-7283811:-1:exon
so has part: feature:7283043-7283147:-1:exon
so has part: feature:7280679-7280745:-1:exon
so has part: feature:7279801-7279918:-1:exon
so has part: feature:7277124-7277263:-1:exon
so has part: feature:7276109-7276249:-1:exon
so has part: feature:7273511-7273557:-1:exon
so has part: feature:7270997-7271060:-1:exon
so has part: feature:7270224-7270333:-1:exon
so has part: feature:7269261-7269399:-1:exon
so has part: feature:7267534-7267745:-1:exon

XP_021077732.1
type: Protein
SIO_000068: ncbiprotein

position:7342627:-1
position: 7342627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7342565-7342627:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7341595-7341697:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7330333-7330436:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7329326-7329349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7325116-7325196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7324076-7324174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7322850-7323256:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7314085-7314171:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7311682-7311752:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7310007-7310100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7308796-7308853:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7306450-7306658:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7304201-7304334:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7303397-7303475:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7302019-7302148:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7298296-7298443:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7287159-7287271:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7284133-7284282:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7283665-7283811:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7283043-7283147:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7280679-7280745:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7279801-7279918:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7277124-7277263:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7276109-7276249:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7273511-7273557:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7270997-7271060:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7270224-7270333:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7269261-7269399:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7267534-7267745:-1:exon

Cops5
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Cops5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7355733..7371892
location: region:7355733-7371892:1
so has part: feature:7355733-7371892:1:exon
subclass of: SO_0000010

110338685
type: Gene
SIO_000068: ncbigene

position:7355733:1
position: 7355733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7371892:1
position: 7371892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7355733-7371892:1:exon

Cops5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Cops5
product: COP9 signalosome subunit 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021222075.2
SIO_010081: Cops5
subclass of: SO_0000673
so part of: Cops5
location: join(7355733..7355985,7358920..7359154,7360133..7360261,7360961..7361026,7361924..7362009,7365963..7366074,7369509..7369657,7371651..7371892)
location: region:7355733-7371892:1
so has part: feature:7355733-7355985:1:exon
so has part: feature:7358920-7359154:1:exon
so has part: feature:7360133-7360261:1:exon
so has part: feature:7360961-7361026:1:exon
so has part: feature:7361924-7362009:1:exon
so has part: feature:7365963-7366074:1:exon
so has part: feature:7369509-7369657:1:exon
so has part: feature:7371651-7371892:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7355733-7355985:1:exon

position:7355985:1
position: 7355985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7358920-7359154:1:exon

position:7358920:1
position: 7358920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7359154:1
position: 7359154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7360133-7360261:1:exon

position:7360133:1
position: 7360133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7360261:1
position: 7360261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7360961-7361026:1:exon

position:7360961:1
position: 7360961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7361026:1
position: 7361026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7361924-7362009:1:exon

position:7361924:1
position: 7361924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7362009:1
position: 7362009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7365963-7366074:1:exon

position:7365963:1
position: 7365963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7366074:1
position: 7366074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7369509-7369657:1:exon

position:7369509:1
position: 7369509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7369657:1
position: 7369657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7371651-7371892:1:exon

position:7371651:1
position: 7371651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cops5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Cops5
product: COP9 signalosome subunit 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 mRNAs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021222074.2
SIO_010081: Cops5
subclass of: SO_0000673
so part of: Cops5
location: join(7355737..7356236,7358920..7359154,7360133..7360261,7360961..7361026,7361924..7362009,7365963..7366074,7369509..7369657,7371651..7371890)
location: region:7355737-7371890:1
so has part: feature:7355737-7356236:1:exon
so has part: feature:7358920-7359154:1:exon
so has part: feature:7360133-7360261:1:exon
so has part: feature:7360961-7361026:1:exon
so has part: feature:7361924-7362009:1:exon
so has part: feature:7365963-7366074:1:exon
so has part: feature:7369509-7369657:1:exon
so has part: feature:7371651-7371890:1:exon

position:7355737:1
position: 7355737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7371890:1
position: 7371890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7355737-7356236:1:exon

position:7356236:1
position: 7356236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7358920-7359154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7360133-7360261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7360961-7361026:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7361924-7362009:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7365963-7366074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7369509-7369657:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7371651-7371890:1:exon

Cops5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Cops5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 5 isoform X2
translation: MSLRRRRAPTREWSGPTSPPVSSVMAALRVYHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINVA
SIO_010081: Cops5
subclass of: SO_0000673
so part of: Cops5
location: join(7355894..7355985,7358920..7359154,7360133..7360261,7360961..7361026,7361924..7362009,7365963..7366074,7369509..7369657,7371651..7371735)
location: region:7355894-7371735:1
so has part: feature:7355894-7355985:1:exon
so has part: feature:7358920-7359154:1:exon
so has part: feature:7360133-7360261:1:exon
so has part: feature:7360961-7361026:1:exon
so has part: feature:7361924-7362009:1:exon
so has part: feature:7365963-7366074:1:exon
so has part: feature:7369509-7369657:1:exon
so has part: feature:7371651-7371735:1:exon

XP_021077734.1
type: Protein
SIO_000068: ncbiprotein

position:7355894:1
position: 7355894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7371735:1
position: 7371735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7355894-7355985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7358920-7359154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7360133-7360261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7360961-7361026:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7361924-7362009:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7365963-7366074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7369509-7369657:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7371651-7371735:1:exon

Cops5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Cops5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 5 isoform X1
translation: MVWTNVTSGLKCHGCLESLVSVHPRWGRSKARSLRPSRIKLHRGCGGDSFSGPSAMAASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINVA
SIO_010081: Cops5
subclass of: SO_0000673
so part of: Cops5
location: join(7355929..7356236,7358920..7359154,7360133..7360261,7360961..7361026,7361924..7362009,7365963..7366074,7369509..7369657,7371651..7371735)
location: region:7355929-7371735:1
so has part: feature:7355929-7356236:1:exon
so has part: feature:7358920-7359154:1:exon
so has part: feature:7360133-7360261:1:exon
so has part: feature:7360961-7361026:1:exon
so has part: feature:7361924-7362009:1:exon
so has part: feature:7365963-7366074:1:exon
so has part: feature:7369509-7369657:1:exon
so has part: feature:7371651-7371735:1:exon

XP_021077733.1
type: Protein
SIO_000068: ncbiprotein

position:7355929:1
position: 7355929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7355929-7356236:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7358920-7359154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7360133-7360261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7360961-7361026:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7361924-7362009:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7365963-7366074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7369509-7369657:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7371651-7371735:1:exon

Ppp1r42
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Ppp1r42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7388806..7427464
location: region:7388806-7427464:1
so has part: feature:7388806-7427464:1:exon
subclass of: SO_0000010

110338869
type: Gene
SIO_000068: ncbigene

position:7388806:1
position: 7388806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7427464:1
position: 7427464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7388806-7427464:1:exon

Ppp1r42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ppp1r42
product: protein phosphatase 1 regulatory subunit 42
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021222335.1
SIO_010081: Ppp1r42
subclass of: SO_0000673
so part of: Ppp1r42
location: join(7388806..7388870,7394449..7394667,7397564..7397730,7398168..7398306,7401438..7401554,7410901..7411018,7415778..7415909,7419040..7419199,7427157..7427464)
location: region:7388806-7427464:1
so has part: feature:7388806-7388870:1:exon
so has part: feature:7394449-7394667:1:exon
so has part: feature:7397564-7397730:1:exon
so has part: feature:7398168-7398306:1:exon
so has part: feature:7401438-7401554:1:exon
so has part: feature:7410901-7411018:1:exon
so has part: feature:7415778-7415909:1:exon
so has part: feature:7419040-7419199:1:exon
so has part: feature:7427157-7427464:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7388806-7388870:1:exon

position:7388870:1
position: 7388870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7394449-7394667:1:exon

position:7394449:1
position: 7394449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7394667:1
position: 7394667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7397564-7397730:1:exon

position:7397564:1
position: 7397564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7397730:1
position: 7397730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7398168-7398306:1:exon

position:7398168:1
position: 7398168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7398306:1
position: 7398306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7401438-7401554:1:exon

position:7401438:1
position: 7401438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7401554:1
position: 7401554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7410901-7411018:1:exon

position:7410901:1
position: 7410901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7411018:1
position: 7411018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7415778-7415909:1:exon

position:7415778:1
position: 7415778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7415909:1
position: 7415909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7419040-7419199:1:exon

position:7419040:1
position: 7419040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7419199:1
position: 7419199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7427157-7427464:1:exon

position:7427157:1
position: 7427157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ppp1r42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ppp1r42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 42
translation: MVRLTVDLIAKNSNLKPRKEETLAQSLKKITHINFSDKNIDSIDDLSLCRNLSVLYLYDNRISQVTNLNYSTNLTHLYLQNNCISCIENLSSLKKLEKLYLGGNYIAVIEGLEGLEELRELHVESQRLPLGEKLLFDPRTLRSLAKSLSTLNISNNNIDDIKDLEMLENLSHLIAVDNQLRHVKDLEPLLKKLMKLWKMDLNGNPVCLKPKYRDKLILMSKSLEFLDGKEIKDMERQFLMNWKASKDAKKISKRRRSRSEDASNSYISNFETIHHIVPVYYPQVGKPKVIFFSDVQRYLVHGNASSKCSLEDKTTITEDIGNLSLKESESLLTKNDIHEPHFLQNPKVKENLSEKKE
SIO_010081: Ppp1r42
subclass of: SO_0000673
so part of: Ppp1r42
location: join(7394539..7394667,7397564..7397730,7398168..7398306,7401438..7401554,7410901..7411018,7415778..7415909,7419040..7419199,7427157..7427268)
location: region:7394539-7427268:1
so has part: feature:7394539-7394667:1:exon
so has part: feature:7397564-7397730:1:exon
so has part: feature:7398168-7398306:1:exon
so has part: feature:7401438-7401554:1:exon
so has part: feature:7410901-7411018:1:exon
so has part: feature:7415778-7415909:1:exon
so has part: feature:7419040-7419199:1:exon
so has part: feature:7427157-7427268:1:exon

XP_021077994.1
type: Protein
SIO_000068: ncbiprotein

position:7394539:1
position: 7394539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7427268:1
position: 7427268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7394539-7394667:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7397564-7397730:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7398168-7398306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7401438-7401554:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7410901-7411018:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7415778-7415909:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7419040-7419199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7427157-7427268:1:exon

Tcf24
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Tcf24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7428323..7436097
location: region:7428323-7436097:1
so has part: feature:7428323-7436097:1:exon
subclass of: SO_0000010

110338870
type: Gene
SIO_000068: ncbigene

position:7428323:1
position: 7428323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7436097:1
position: 7436097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7428323-7436097:1:exon

Tcf24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Tcf24
product: transcription factor 24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021222337.1
SIO_010081: Tcf24
subclass of: SO_0000673
so part of: Tcf24
location: join(7428323..7428349,7428507..7428925,7432741..7436097)
location: region:7428323-7436097:1
so has part: feature:7428323-7428349:1:exon
so has part: feature:7428507-7428925:1:exon
so has part: feature:7432741-7436097:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7428323-7428349:1:exon

position:7428349:1
position: 7428349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7428507-7428925:1:exon

position:7428507:1
position: 7428507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7428925:1
position: 7428925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7432741-7436097:1:exon

position:7432741:1
position: 7432741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tcf24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Tcf24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor 24
translation: MERGRPASSPRSAESAPPAPAGLDWSPGPTGTGPTGPSGVAARSGGGRPAAANAARERSRVQTLRHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQDDTDAPGDPGLGALRGDGYLHPVKKWPMRSRLYIGATGQFLKHSVSGEKASHSDASAASQP
SIO_010081: Tcf24
subclass of: SO_0000673
so part of: Tcf24
location: join(7428539..7428925,7432741..7432854)
location: region:7428539-7432854:1
so has part: feature:7428539-7428925:1:exon
so has part: feature:7432741-7432854:1:exon

XP_021077996.1
type: Protein
SIO_000068: ncbiprotein

position:7428539:1
position: 7428539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7432854:1
position: 7432854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7428539-7428925:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7432741-7432854:1:exon

LOC115062965
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7452303..7454305
location: region:7452303-7454305:1
so has part: feature:7452303-7454305:1:exon
subclass of: SO_0000011

115062965
type: Gene
SIO_000068: ncbigene

position:7452303:1
position: 7452303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7454305:1
position: 7454305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7452303-7454305:1:exon

LOC115062965
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: lncRNA
gene: LOC115062965
product: uncharacterized LOC115062965
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003842861.1
SIO_010081: LOC115062965
subclass of: SO_0000673
so part of: LOC115062965
location: join(7452303..7452390,7453613..7453721,7453935..7454003,7454166..7454305)
location: region:7452303-7454305:1
so has part: feature:7452303-7452390:1:exon
so has part: feature:7453613-7453721:1:exon
so has part: feature:7453935-7454003:1:exon
so has part: feature:7454166-7454305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7452303-7452390:1:exon

position:7452390:1
position: 7452390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7453613-7453721:1:exon

position:7453613:1
position: 7453613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7453721:1
position: 7453721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7453935-7454003:1:exon

position:7453935:1
position: 7453935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7454003:1
position: 7454003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7454166-7454305:1:exon

position:7454166:1
position: 7454166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115063030
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115063030
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7453777..7453863
location: region:7453777-7453863:1
so has part: feature:7453777-7453863:1:exon
subclass of: SO_0000578

115063030
type: Gene
SIO_000068: ncbigene

position:7453777:1
position: 7453777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7453863:1
position: 7453863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7453777-7453863:1:exon

LOC115063030
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snoRNA
gene: LOC115063030
product: small nucleolar RNA SNORD87
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00439
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842913.1
SIO_010081: LOC115063030
subclass of: SO_0000673
so part of: LOC115063030
location: 7453777..7453863
location: region:7453777-7453863:1
so has part: feature:7453777-7453863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7453777-7453863:1:exon

Mcmdc2
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Mcmdc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7455270..7493940)
location: region:7455270-7493940:-1
so has part: feature:7455270-7493940:-1:exon
subclass of: SO_0000010