Mus pahari chromosome 20, PAHARI_EIJ_v1.1, whole genome shotgun sequence.
type: Entry
definition: Mus pahari chromosome 20, PAHARI_EIJ_v1.1, whole genome shotgun sequence.
sequence version: NC_034609.1
sequence date: 2019-06-19
sequence: sequence
division: CON
label: NC_034609.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA387191
dblink: SAMEA3367645
keyword: WGS
keyword: RefSeq
source: Mus pahari (shrew mouse)
organism: Mus pahari
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLT608293.1.\nAssembly name: PAHARI_EIJ_v1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the EBI on 2017/04/28. The\noriginal whole-genome shotgun project has the accession\nFMBV00000000.2.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Mus pahari Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 52117086
topology: linear
so has quality: SO_0000987
location: 1..52117086
location: region:1-52117086:1
RO_0002162: 10093

NC_034609
type: RefSeq
SIO_000068: refseq

PRJNA387191
type: BioProject
SIO_000068: bioproject

SAMEA3367645
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52117086:1
position: 52117086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-52117086:1:source
so part of: sequence
organism: Mus pahari
mol type: genomic DNA
chromosome: 20
sex: female
tissue type: tail

10093
type: Taxonomy
SIO_000068: taxonomy

LOC110337619
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337619
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3980..9443)
location: region:3980-9443:-1
so has part: feature:3980-9443:-1:exon

110337619
type: Gene
SIO_000068: ncbigene

position:3980:-1
position: 3980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9443:-1
position: 9443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3980-9443:-1:exon

LOC110337619
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337619
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110337619
subclass of: SO_0000673
so part of: LOC110337619
location: complement(3980..3993)
location: region:3980-3993:-1
so has part: feature:3980-3993:-1:exon

position:3993:-1
position: 3993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3980-3993:-1:exon

LOC110337619
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337619
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110337619
subclass of: SO_0000673
so part of: LOC110337619
location: complement(8265..9443)
location: region:8265-9443:-1
so has part: feature:8265-9443:-1:exon

position:8265:-1
position: 8265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8265-9443:-1:exon

LOC110337710
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 110227..111048
location: region:110227-111048:1
so has part: feature:110227-111048:1:exon

110337710
type: Gene
SIO_000068: ncbigene

position:110227:1
position: 110227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111048:1
position: 111048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110227-111048:1:exon

LOC110337710
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337710
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110337710
subclass of: SO_0000673
so part of: LOC110337710
location: 110227..111048
location: region:110227-111048:1
so has part: feature:110227-111048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110227-111048:1:exon

LOC110337202
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337202
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 126462..126808
location: region:126462-126808:1
so has part: feature:126462-126808:1:exon

110337202
type: Gene
SIO_000068: ncbigene

position:126462:1
position: 126462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126808:1
position: 126808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126462-126808:1:exon

LOC110337202
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337202
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC110337202
subclass of: SO_0000673
so part of: LOC110337202
location: 126462..126808
location: region:126462-126808:1
so has part: feature:126462-126808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126462-126808:1:exon

Iqcm
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Iqcm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 294067..646345
location: region:294067-646345:1
so has part: feature:294067-646345:1:exon
subclass of: SO_0000010

110337763
type: Gene
SIO_000068: ncbigene

position:294067:1
position: 294067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646345:1
position: 646345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294067-646345:1:exon

Iqcm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Iqcm
product: IQ motif containing M
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021220812.1
SIO_010081: Iqcm
subclass of: SO_0000673
so part of: Iqcm
location: join(294067..294103,306619..306701,308562..308826,345577..345667,350801..350880,395630..395745,429037..429095,456202..456289,456416..456560,466165..466299,562022..562183,646242..646345)
location: region:294067-646345:1
so has part: feature:294067-294103:1:exon
so has part: feature:306619-306701:1:exon
so has part: feature:308562-308826:1:exon
so has part: feature:345577-345667:1:exon
so has part: feature:350801-350880:1:exon
so has part: feature:395630-395745:1:exon
so has part: feature:429037-429095:1:exon
so has part: feature:456202-456289:1:exon
so has part: feature:456416-456560:1:exon
so has part: feature:466165-466299:1:exon
so has part: feature:562022-562183:1:exon
so has part: feature:646242-646345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294067-294103:1:exon

position:294103:1
position: 294103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:306619-306701:1:exon

position:306619:1
position: 306619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306701:1
position: 306701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308562-308826:1:exon

position:308562:1
position: 308562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308826:1
position: 308826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:345577-345667:1:exon

position:345577:1
position: 345577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345667:1
position: 345667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:350801-350880:1:exon

position:350801:1
position: 350801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350880:1
position: 350880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:395630-395745:1:exon

position:395630:1
position: 395630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395745:1
position: 395745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:429037-429095:1:exon

position:429037:1
position: 429037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429095:1
position: 429095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:456202-456289:1:exon

position:456202:1
position: 456202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456289:1
position: 456289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:456416-456560:1:exon

position:456416:1
position: 456416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456560:1
position: 456560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:466165-466299:1:exon

position:466165:1
position: 466165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466299:1
position: 466299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:562022-562183:1:exon

position:562022:1
position: 562022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562183:1
position: 562183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:646242-646345:1:exon

position:646242:1
position: 646242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Iqcm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Iqcm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ domain-containing protein M
translation: MATAEAIPEGVGGPVLETTQQDFLQEAKSLIAQHHRRLNENKAQGTSIDVFKNKHQKPKTVTFIPFEVKKSEILNVVQEHQLVLRSISYPRDTSKCTALIEASQQISFKEPHVSNIKEKYHPVDLFKTEKVKLGKIMNDIESVSKQMEMEKEMHLRKSRMLEPFHSHIGLPLHNLTSSLGLLKELADRTLYDWRSTASIRSSHLPHESAQSLSESSVTFKDYYMRPLKKKDLQPIKKELKTEKSLYQNNTETTQHRRSGDRNGCQCLEDSALRVFYHGPNLKTVIKMYQCLIHRVRHRLGLWRTRQIIYFGELEEWMDRKKFYETMFVKREDWQGLERSELLKYFNDCGHFPTQTQIDEYWDLLHRHGRGKYSEVIKKSNAIELLFTLYPPQGARVNVSTRLRSTWLRPLVDGEEGYKYIVNGHPILKRANIRTVGKLVARSIRERKMRQFYKT
SIO_010081: Iqcm
subclass of: SO_0000673
so part of: Iqcm
location: join(294067..294103,306619..306701,308562..308826,345577..345667,350801..350880,395630..395745,429037..429095,456202..456289,456416..456560,466165..466299,562022..562183,646242..646345)
location: region:294067-646345:1
so has part: feature:294067-294103:1:exon
so has part: feature:306619-306701:1:exon
so has part: feature:308562-308826:1:exon
so has part: feature:345577-345667:1:exon
so has part: feature:350801-350880:1:exon
so has part: feature:395630-395745:1:exon
so has part: feature:429037-429095:1:exon
so has part: feature:456202-456289:1:exon
so has part: feature:456416-456560:1:exon
so has part: feature:466165-466299:1:exon
so has part: feature:562022-562183:1:exon
so has part: feature:646242-646345:1:exon

XP_021076471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294067-294103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306619-306701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308562-308826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345577-345667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350801-350880:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:395630-395745:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429037-429095:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456202-456289:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:456416-456560:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466165-466299:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562022-562183:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:646242-646345:1:exon

LOC115062747
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062747
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(655883..655989)
location: region:655883-655989:-1
so has part: feature:655883-655989:-1:exon
subclass of: SO_0000623

115062747
type: Gene
SIO_000068: ncbigene

position:655883:-1
position: 655883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655989:-1
position: 655989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655883-655989:-1:exon

LOC115062747
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snRNA
gene: LOC115062747
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842676.1
SIO_010081: LOC115062747
subclass of: SO_0000673
so part of: LOC115062747
location: complement(655883..655989)
location: region:655883-655989:-1
so has part: feature:655883-655989:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:655883-655989:-1:exon

LOC115062750
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062750
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(685322..685448)
location: region:685322-685448:-1
so has part: feature:685322-685448:-1:exon
subclass of: SO_0000578

115062750
type: Gene
SIO_000068: ncbigene

position:685322:-1
position: 685322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685448:-1
position: 685448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685322-685448:-1:exon

LOC115062750
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snoRNA
gene: LOC115062750
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842679.1
SIO_010081: LOC115062750
subclass of: SO_0000673
so part of: LOC115062750
location: complement(685322..685448)
location: region:685322-685448:-1
so has part: feature:685322-685448:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685322-685448:-1:exon

LOC115062758
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062758
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(925816..925922)
location: region:925816-925922:-1
so has part: feature:925816-925922:-1:exon
subclass of: SO_0000623

115062758
type: Gene
SIO_000068: ncbigene

position:925816:-1
position: 925816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925922:-1
position: 925922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:925816-925922:-1:exon

LOC115062758
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snRNA
gene: LOC115062758
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842684.1
SIO_010081: LOC115062758
subclass of: SO_0000673
so part of: LOC115062758
location: complement(925816..925922)
location: region:925816-925922:-1
so has part: feature:925816-925922:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:925816-925922:-1:exon

LOC110337681
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1048100..1048713)
location: region:1048100-1048713:-1
so has part: feature:1048100-1048713:-1:exon

110337681
type: Gene
SIO_000068: ncbigene

position:1048100:-1
position: 1048100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048713:-1
position: 1048713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048100-1048713:-1:exon

LOC110337681
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337681
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC110337681
subclass of: SO_0000673
so part of: LOC110337681
location: complement(1048100..1048713)
location: region:1048100-1048713:-1
so has part: feature:1048100-1048713:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1048100-1048713:-1:exon

LOC110337623
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1511138..1511943)
location: region:1511138-1511943:-1
so has part: feature:1511138-1511943:-1:exon

110337623
type: Gene
SIO_000068: ncbigene

position:1511138:-1
position: 1511138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511943:-1
position: 1511943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1511138-1511943:-1:exon

LOC110337623
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337623
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
pseudo: true
SIO_010081: LOC110337623
subclass of: SO_0000673
so part of: LOC110337623
location: complement(1511138..1511943)
location: region:1511138-1511943:-1
so has part: feature:1511138-1511943:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1511138-1511943:-1:exon

Nr3c2
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Nr3c2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1547399..1892562
location: region:1547399-1892562:1
so has part: feature:1547399-1892562:1:exon
subclass of: SO_0000010

110337580
type: Gene
SIO_000068: ncbigene

position:1547399:1
position: 1547399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1892562:1
position: 1892562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1547399-1892562:1:exon

Nr3c2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Nr3c2
product: nuclear receptor subfamily 3 group C member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 32 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021220574.2
SIO_010081: Nr3c2
subclass of: SO_0000673
so part of: Nr3c2
location: join(1547399..1547640,1553228..1554986,1727467..1727606,1799140..1799256,1830897..1831235,1832615..1832759,1857252..1857382,1865359..1865516,1889936..1892562)
location: region:1547399-1892562:1
so has part: feature:1547399-1547640:1:exon
so has part: feature:1553228-1554986:1:exon
so has part: feature:1727467-1727606:1:exon
so has part: feature:1799140-1799256:1:exon
so has part: feature:1830897-1831235:1:exon
so has part: feature:1832615-1832759:1:exon
so has part: feature:1857252-1857382:1:exon
so has part: feature:1865359-1865516:1:exon
so has part: feature:1889936-1892562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1547399-1547640:1:exon

position:1547640:1
position: 1547640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1553228-1554986:1:exon

position:1553228:1
position: 1553228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1554986:1
position: 1554986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1727467-1727606:1:exon

position:1727467:1
position: 1727467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1727606:1
position: 1727606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1799140-1799256:1:exon

position:1799140:1
position: 1799140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1799256:1
position: 1799256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1830897-1831235:1:exon

position:1830897:1
position: 1830897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1831235:1
position: 1831235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1832615-1832759:1:exon

position:1832615:1
position: 1832615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1832759:1
position: 1832759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1857252-1857382:1:exon

position:1857252:1
position: 1857252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1857382:1
position: 1857382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1865359-1865516:1:exon

position:1865359:1
position: 1865359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1865516:1
position: 1865516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1889936-1892562:1:exon

position:1889936:1
position: 1889936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nr3c2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Nr3c2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mineralocorticoid receptor
translation: METKGYHSLPEGLDMERRWSQVSQTLERSSLGPAERTNENSYMEIVNVSCVSGATPNNSTQGSSKEKHELLPCLQQDNSRSGILPSDIKTELESKELSATVAESMGLYMDSVRDTEYTYDQQNQQGSLSPAKIYQNMEQLVKFYKENGHRSSTLSAISRPLRSFMPDSGASMNGGAMRAIVKSPIICHEKSPSVCSPLNMPSSVCSPAGINSMSSSTASFGSFSVHSPVTQGTSLTCSPSVENRGSRSHSPAHASNVGSPLSSPLSSMKSPISSPPSHCSVKSPVSSPNNVPLRSSVSSPANHNNSRCSVSSPSNTNNRSTLSSPTASTVGSIGSPISNAFSYSTSGASAGAGTIQDMVPSPDTHEKGAHDVPFPKTEEVEKAISNGVTGQLNIVQYIKPEPDGAFSSSCLGGNNKINPSSPFSVPIKQESSKHSCSGASFKGNPTVNPFPFMDGSYFSFMDDKDYYSLSGILGPPVPGFDGSCEGSAFPGGIKQEPDDGSYYPETSIPSSAIIGVNSGGQSFHYRIGAQGTISLSRSPRDQSFQHLSSFPPVNTLVESWKPHGDLSSRRSDGYPVLEYIPENVSSSTLRSVSTGSSRPSKICLVCGDEASGCHYGVVTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRLQKCLQAGMNLGARKSKKLGKLKGLHDEQSQQPPPPPPQSPEEGTTYIAPTKEPSVNSALVPQLASITRALTPSPAMILENIEPEIVYAGYDNSKPDTAESLLSTLNRLAGKQMIQVVKWAKILPGFKNLPLEDQITLIQYSWMCLSSFALSWRSYKHTNSQFLYFAPDLVFNEEKMHQSAMYELCQGMRQISLQFVRLQLTFEEYSIMKVLLLLSTVPKDGLKSQAAFEEMRTNYIKELRKMVTKCPNSSGQSWQRFYQLTKLLDSMHDLVNDLLEFCFYTFRESQALKVEFPAMLVEIISDQLPKVESGNAKPLYFHRK
SIO_010081: Nr3c2
subclass of: SO_0000673
so part of: Nr3c2
location: join(1553230..1554986,1727467..1727606,1799140..1799256,1830897..1831235,1832615..1832759,1857252..1857382,1865359..1865516,1889936..1890091)
location: region:1553230-1890091:1
so has part: feature:1553230-1554986:1:exon
so has part: feature:1727467-1727606:1:exon
so has part: feature:1799140-1799256:1:exon
so has part: feature:1830897-1831235:1:exon
so has part: feature:1832615-1832759:1:exon
so has part: feature:1857252-1857382:1:exon
so has part: feature:1865359-1865516:1:exon
so has part: feature:1889936-1890091:1:exon

XP_021076233.1
type: Protein
SIO_000068: ncbiprotein

position:1553230:1
position: 1553230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1890091:1
position: 1890091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1553230-1554986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1727467-1727606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1799140-1799256:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1830897-1831235:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1832615-1832759:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1857252-1857382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1865359-1865516:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1889936-1890091:1:exon

LOC115062756
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062756
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1786079..1786215)
location: region:1786079-1786215:-1
so has part: feature:1786079-1786215:-1:exon
subclass of: SO_0000578

115062756
type: Gene
SIO_000068: ncbigene

position:1786079:-1
position: 1786079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1786215:-1
position: 1786215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1786079-1786215:-1:exon

LOC115062756
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snoRNA
gene: LOC115062756
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842682.1
SIO_010081: LOC115062756
subclass of: SO_0000673
so part of: LOC115062756
location: complement(1786079..1786215)
location: region:1786079-1786215:-1
so has part: feature:1786079-1786215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1786079-1786215:-1:exon

Arhgap10
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Arhgap10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1893719..2153477)
location: region:1893719-2153477:-1
so has part: feature:1893719-2153477:-1:exon
subclass of: SO_0000010

110337764
type: Gene
SIO_000068: ncbigene

position:1893719:-1
position: 1893719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2153477:-1
position: 2153477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1893719-2153477:-1:exon

Arhgap10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Arhgap10
product: Rho GTPase activating protein 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021220813.2
SIO_010081: Arhgap10
subclass of: SO_0000673
so part of: Arhgap10
location: complement(join(1893719..1893735,1898526..1898546,1904798..1904889,1906630..1906782,1924257..1924416,1950056..1950206,1982776..1982935,1984626..1984731,1990037..1990095,1996989..1997076,2004108..2004182,2021303..2021368,2023587..2023632,2026375..2026456,2041611..2041705,2043124..2043230,2045276..2045405,2053640..2053744,2054202..2054312,2060078..2060179,2068052..2068123,2081875..2081936,2082009..2082104,2153185..2153477))
location: region:1893719-2153477:-1
so has part: feature:2153185-2153477:-1:exon
so has part: feature:2082009-2082104:-1:exon
so has part: feature:2081875-2081936:-1:exon
so has part: feature:2068052-2068123:-1:exon
so has part: feature:2060078-2060179:-1:exon
so has part: feature:2054202-2054312:-1:exon
so has part: feature:2053640-2053744:-1:exon
so has part: feature:2045276-2045405:-1:exon
so has part: feature:2043124-2043230:-1:exon
so has part: feature:2041611-2041705:-1:exon
so has part: feature:2026375-2026456:-1:exon
so has part: feature:2023587-2023632:-1:exon
so has part: feature:2021303-2021368:-1:exon
so has part: feature:2004108-2004182:-1:exon
so has part: feature:1996989-1997076:-1:exon
so has part: feature:1990037-1990095:-1:exon
so has part: feature:1984626-1984731:-1:exon
so has part: feature:1982776-1982935:-1:exon
so has part: feature:1950056-1950206:-1:exon
so has part: feature:1924257-1924416:-1:exon
so has part: feature:1906630-1906782:-1:exon
so has part: feature:1904798-1904889:-1:exon
so has part: feature:1898526-1898546:-1:exon
so has part: feature:1893719-1893735:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2153185-2153477:-1:exon

position:2153185:-1
position: 2153185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2082009-2082104:-1:exon

position:2082009:-1
position: 2082009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2082104:-1
position: 2082104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2081875-2081936:-1:exon

position:2081875:-1
position: 2081875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2081936:-1
position: 2081936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2068052-2068123:-1:exon

position:2068052:-1
position: 2068052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2068123:-1
position: 2068123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2060078-2060179:-1:exon

position:2060078:-1
position: 2060078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2060179:-1
position: 2060179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2054202-2054312:-1:exon

position:2054202:-1
position: 2054202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2054312:-1
position: 2054312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2053640-2053744:-1:exon

position:2053640:-1
position: 2053640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2053744:-1
position: 2053744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2045276-2045405:-1:exon

position:2045276:-1
position: 2045276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2045405:-1
position: 2045405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2043124-2043230:-1:exon

position:2043124:-1
position: 2043124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2043230:-1
position: 2043230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2041611-2041705:-1:exon

position:2041611:-1
position: 2041611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2041705:-1
position: 2041705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2026375-2026456:-1:exon

position:2026375:-1
position: 2026375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2026456:-1
position: 2026456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2023587-2023632:-1:exon

position:2023587:-1
position: 2023587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2023632:-1
position: 2023632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2021303-2021368:-1:exon

position:2021303:-1
position: 2021303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2021368:-1
position: 2021368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2004108-2004182:-1:exon

position:2004108:-1
position: 2004108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2004182:-1
position: 2004182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1996989-1997076:-1:exon

position:1996989:-1
position: 1996989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1997076:-1
position: 1997076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1990037-1990095:-1:exon

position:1990037:-1
position: 1990037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1990095:-1
position: 1990095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1984626-1984731:-1:exon

position:1984626:-1
position: 1984626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1984731:-1
position: 1984731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1982776-1982935:-1:exon

position:1982776:-1
position: 1982776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1982935:-1
position: 1982935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1950056-1950206:-1:exon

position:1950056:-1
position: 1950056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1950206:-1
position: 1950206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1924257-1924416:-1:exon

position:1924257:-1
position: 1924257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1924416:-1
position: 1924416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1906630-1906782:-1:exon

position:1906630:-1
position: 1906630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906782:-1
position: 1906782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1904798-1904889:-1:exon

position:1904798:-1
position: 1904798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1904889:-1
position: 1904889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1898526-1898546:-1:exon

position:1898526:-1
position: 1898526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1898546:-1
position: 1898546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1893719-1893735:-1:exon

position:1893735:-1
position: 1893735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Arhgap10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Arhgap10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 10
translation: MGLQPLEFSDCYLDSPWFRERIRAHEAELERTNKFIKELIKDGKNLIAATKSLSAAQRKFAHSLRDFKFEFIGDAETDDERCIDASLREFSNFLKNLEEQREIMALSVTETLIKPLEKFRKEQLGAVKEEKKKFDKETEKNYSLIDKHLTLSARKKDSHLQEADLQVEQNRQHFYELSLEYVCKLQEIQERKKFEFVEPMLSFFQGMFTFYHQGHELSKDFNHYKMELQINIQNTRNRFEGTRSEVEELMNKIRQNPKDQKRASQFTAEGYLYVQEKRPAPFGSSWVKHYCMYRKTAKKFNMIPFEHRSGGKLGDGEAFFLKECTKRHIDSIDRRFCFDIEAADRPGVPLTVQAFSEEERKQWLEALGGKEALFHAFNRAVVPRPEGGAQLDKMGFTILRKCISAVETRGINDQGLYRVVGVSSKVQRLLTMLMDVKMCNELDLENSADWEVKTVTSALKQYLRSLPEPLMTYELHRDFIVPAKSGSPESRVNAIHVLVHKLPEKNKEMLDILVKHLTNVSSHSKQNLMTVANLGVVFGPTLMRPQEETVAAIMDLKFQNIVVEILIENHEKIFRTSPDTAFAEPTCLSASPPNAPPRQSKRQGQRTKRPVAVYNLCLELEEGDSPSPLKEDPPSGSQDSLSTPSPTTSAAHGPPGLDRNHLAADGGSCGDATATTPSQTRPSMVQWLNMQSPSTPSSNPAATPPSPRMSPFCPSPAASIVDKLPECVINRKARAVYLCEAEHSSELSFEIGAIFEDVQTSREPVKQLP
SIO_010081: Arhgap10
subclass of: SO_0000673
so part of: Arhgap10
location: complement(join(1893719..1893735,1898526..1898546,1904798..1904889,1906630..1906782,1924257..1924416,1950056..1950206,1982776..1982935,1984626..1984731,1990037..1990095,1996989..1997076,2004108..2004182,2021303..2021368,2023587..2023632,2026375..2026456,2041611..2041705,2043124..2043230,2045276..2045405,2053640..2053744,2054202..2054312,2060078..2060179,2068052..2068123,2081875..2081936,2082009..2082104,2153185..2153338))
location: region:1893719-2153338:-1
so has part: feature:2153185-2153338:-1:exon
so has part: feature:2082009-2082104:-1:exon
so has part: feature:2081875-2081936:-1:exon
so has part: feature:2068052-2068123:-1:exon
so has part: feature:2060078-2060179:-1:exon
so has part: feature:2054202-2054312:-1:exon
so has part: feature:2053640-2053744:-1:exon
so has part: feature:2045276-2045405:-1:exon
so has part: feature:2043124-2043230:-1:exon
so has part: feature:2041611-2041705:-1:exon
so has part: feature:2026375-2026456:-1:exon
so has part: feature:2023587-2023632:-1:exon
so has part: feature:2021303-2021368:-1:exon
so has part: feature:2004108-2004182:-1:exon
so has part: feature:1996989-1997076:-1:exon
so has part: feature:1990037-1990095:-1:exon
so has part: feature:1984626-1984731:-1:exon
so has part: feature:1982776-1982935:-1:exon
so has part: feature:1950056-1950206:-1:exon
so has part: feature:1924257-1924416:-1:exon
so has part: feature:1906630-1906782:-1:exon
so has part: feature:1904798-1904889:-1:exon
so has part: feature:1898526-1898546:-1:exon
so has part: feature:1893719-1893735:-1:exon

XP_021076472.1
type: Protein
SIO_000068: ncbiprotein

position:2153338:-1
position: 2153338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2153185-2153338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2082009-2082104:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2081875-2081936:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2068052-2068123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2060078-2060179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2054202-2054312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2053640-2053744:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2045276-2045405:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2043124-2043230:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2041611-2041705:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2026375-2026456:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2023587-2023632:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2021303-2021368:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2004108-2004182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1996989-1997076:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1990037-1990095:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1984626-1984731:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1982776-1982935:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1950056-1950206:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1924257-1924416:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1906630-1906782:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1904798-1904889:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1898526-1898546:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1893719-1893735:-1:exon

LOC115062695
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2226506..2227358)
location: region:2226506-2227358:-1
so has part: feature:2226506-2227358:-1:exon
subclass of: SO_0000010

115062695
type: Gene
SIO_000068: ncbigene

position:2226506:-1
position: 2226506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2227358:-1
position: 2227358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2226506-2227358:-1:exon

LOC115062695
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: LOC115062695
product: transmembrane protein 184C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029532564.1
SIO_010081: LOC115062695
subclass of: SO_0000673
so part of: LOC115062695
location: complement(2226506..2227358)
location: region:2226506-2227358:-1
so has part: feature:2226506-2227358:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2226506-2227358:-1:exon

LOC115062695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: LOC115062695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 184C-like
translation: MRGYQKTKCFPGDPSHTEHSSLLSSSSQDMTSDSSKVPSPVGLYQGFGYTIMSHSSISILNDIPEEQQKLLNSEQDVTINIPEEQQKLLDIGKDVMIDIPEEQQKLLDTGKNVMIDIPEQEKEIPGNSQYQDHVQTVTSQASTDTSEDSMSDISESQQETSNSFMDSYS
SIO_010081: LOC115062695
subclass of: SO_0000673
so part of: LOC115062695
location: complement(2226846..2227355)
location: region:2226846-2227355:-1
so has part: feature:2226846-2227355:-1:exon

XP_029388424.1
type: Protein
SIO_000068: ncbiprotein

position:2226846:-1
position: 2226846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2227355:-1
position: 2227355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2226846-2227355:-1:exon

LOC110337765
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2228334..2237193)
location: region:2228334-2237193:-1
so has part: feature:2228334-2237193:-1:exon
subclass of: SO_0000010

110337765
type: Gene
SIO_000068: ncbigene

position:2228334:-1
position: 2228334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2237193:-1
position: 2237193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2228334-2237193:-1:exon

LOC110337765
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: LOC110337765
product: transmembrane protein 184C
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021220814.2
SIO_010081: LOC110337765
subclass of: SO_0000673
so part of: LOC110337765
location: complement(join(2228334..2228990,2229709..2230049,2231669..2231705,2231789..2231919,2236656..2237193))
location: region:2228334-2237193:-1
so has part: feature:2236656-2237193:-1:exon
so has part: feature:2231789-2231919:-1:exon
so has part: feature:2231669-2231705:-1:exon
so has part: feature:2229709-2230049:-1:exon
so has part: feature:2228334-2228990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2236656-2237193:-1:exon

position:2236656:-1
position: 2236656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2231789-2231919:-1:exon

position:2231789:-1
position: 2231789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2231919:-1
position: 2231919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2231669-2231705:-1:exon

position:2231669:-1
position: 2231669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2231705:-1
position: 2231705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2229709-2230049:-1:exon

position:2229709:-1
position: 2229709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2230049:-1
position: 2230049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2228334-2228990:-1:exon

position:2228990:-1
position: 2228990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110337765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: LOC110337765
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(2228707..2228709),aa:OTHER)
product: LOW QUALITY PROTEIN: transmembrane protein 184C
translation: MPWVCNLNNWRRWIRPLLVLIYAMAVLVLVPIGIWEFQKRKVGIHTKAWFVAGIFLLLTIPVSIWGILQHLVHYTQPELQKPIIRILWMVPIYSMDSWVALKYPQITLYVDTWRECYEAYVIYNFXFLTTYLTIRFPNLVLHLEAKDQQNHLPPLCCCPLWAVGEMLLFRCKLGVLQYTVVRSITTVIAVVCEILGVYDEGKFGFNNAWTYCLKFHFPSLVILNNLTQLFAMYCLLLFYKFLKEELSPIQPVGKFLCVKLVFVSFWQAVIIALLVKVGIISEKRTWEWQSADAVATGLQDFIICIXMFFEAIAHHYSFSYKTYVHEVEEGSCFDSFLATWDVSDIRDNISEQVSXKCFPGDPDHNEHSNLLSSSSQDMTSGSSKXPSPVGLYQGFGYTITSQSPISIANLYEEILNAIPEEQQKLLNSEE
SIO_010081: LOC110337765
subclass of: SO_0000673
so part of: LOC110337765
location: complement(join(2228334..2228990,2229709..2230049,2231669..2231705,2231789..2231919,2236656..2236778))
location: region:2228334-2236778:-1
so has part: feature:2236656-2236778:-1:exon
so has part: feature:2231789-2231919:-1:exon
so has part: feature:2231669-2231705:-1:exon
so has part: feature:2229709-2230049:-1:exon
so has part: feature:2228334-2228990:-1:exon

XP_021076473.1
type: Protein
SIO_000068: ncbiprotein

position:2236778:-1
position: 2236778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2236656-2236778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2231789-2231919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2231669-2231705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2229709-2230049:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2228334-2228990:-1:exon

Ednra
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Ednra
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2277442..2343578)
location: region:2277442-2343578:-1
so has part: feature:2277442-2343578:-1:exon
subclass of: SO_0000010

110337377
type: Gene
SIO_000068: ncbigene

position:2277442:-1
position: 2277442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2343578:-1
position: 2343578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2277442-2343578:-1:exon

Ednra
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ednra
product: endothelin receptor type A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021220251.1
SIO_010081: Ednra
subclass of: SO_0000673
so part of: Ednra
location: complement(join(2277442..2279518,2281666..2281774,2282137..2282270,2285878..2286030,2289251..2289449,2305539..2305666,2336456..2336935,2343234..2343578))
location: region:2277442-2343578:-1
so has part: feature:2343234-2343578:-1:exon
so has part: feature:2336456-2336935:-1:exon
so has part: feature:2305539-2305666:-1:exon
so has part: feature:2289251-2289449:-1:exon
so has part: feature:2285878-2286030:-1:exon
so has part: feature:2282137-2282270:-1:exon
so has part: feature:2281666-2281774:-1:exon
so has part: feature:2277442-2279518:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2343234-2343578:-1:exon

position:2343234:-1
position: 2343234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2336456-2336935:-1:exon

position:2336456:-1
position: 2336456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2336935:-1
position: 2336935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2305539-2305666:-1:exon

position:2305539:-1
position: 2305539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2305666:-1
position: 2305666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2289251-2289449:-1:exon

position:2289251:-1
position: 2289251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2289449:-1
position: 2289449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2285878-2286030:-1:exon

position:2285878:-1
position: 2285878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2286030:-1
position: 2286030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2282137-2282270:-1:exon

position:2282137:-1
position: 2282137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2282270:-1
position: 2282270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2281666-2281774:-1:exon

position:2281666:-1
position: 2281666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2281774:-1
position: 2281774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2277442-2279518:-1:exon

position:2279518:-1
position: 2279518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ednra
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ednra
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelin-1 receptor
translation: MGVFCLAAYFWLTMVGGAIADNPERYSANLSSHMEDFTPFPGTEINFLGTTHRPPNLALPSNGSMHGYCPQQTKITTAFKYINTVISCTIFIVGMVGNATLLRIIYQNKCMRNGPNALIASLALGDLIYVVIDLPINVFKLLAGRWPFDHHEFGVFLCKLFPFLQKSSVGITVLNLCALSVDRYRAVASWSRVQGIGIPLITAIEIVSIWILSFILAIPEAIGFVMVPFEYRGELHRTCMLNATSKFMEFYQDVKDWWLFGFYFCMPLVCTAIFYTLMTCEMLNRRNGSLRIALSEHLKQRREVAKTVFCLVVIFALCWFPLHLSRILKKTVYDEMDKNRCELLSFLLLMDYIGINLATMNSCINPIALYFVSKKFKNCFQSCLCCCCHQSKSLMTSVPMNGTSIQWKNQEQNNHNTERSSHKDSMN
SIO_010081: Ednra
subclass of: SO_0000673
so part of: Ednra
location: complement(join(2279378..2279518,2281666..2281774,2282137..2282270,2285878..2286030,2289251..2289449,2305539..2305666,2336456..2336875))
location: region:2279378-2336875:-1
so has part: feature:2336456-2336875:-1:exon
so has part: feature:2305539-2305666:-1:exon
so has part: feature:2289251-2289449:-1:exon
so has part: feature:2285878-2286030:-1:exon
so has part: feature:2282137-2282270:-1:exon
so has part: feature:2281666-2281774:-1:exon
so has part: feature:2279378-2279518:-1:exon

XP_021075910.1
type: Protein
SIO_000068: ncbiprotein

position:2279378:-1
position: 2279378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2336875:-1
position: 2336875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2336456-2336875:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2305539-2305666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2289251-2289449:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2285878-2286030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2282137-2282270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2281666-2281774:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2279378-2279518:-1:exon

LOC115062746
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062746
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2404299..2404435
location: region:2404299-2404435:1
so has part: feature:2404299-2404435:1:exon
subclass of: SO_0000578

115062746
type: Gene
SIO_000068: ncbigene

position:2404299:1
position: 2404299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2404435:1
position: 2404435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2404299-2404435:1:exon

LOC115062746
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snoRNA
gene: LOC115062746
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842675.1
SIO_010081: LOC115062746
subclass of: SO_0000673
so part of: LOC115062746
location: 2404299..2404435
location: region:2404299-2404435:1
so has part: feature:2404299-2404435:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2404299-2404435:1:exon

LOC115062722
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062722
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2431185..2431288
location: region:2431185-2431288:1
so has part: feature:2431185-2431288:1:exon
subclass of: SO_0000623

115062722
type: Gene
SIO_000068: ncbigene

position:2431185:1
position: 2431185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2431288:1
position: 2431288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2431185-2431288:1:exon

LOC115062722
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snRNA
gene: LOC115062722
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842653.1
SIO_010081: LOC115062722
subclass of: SO_0000673
so part of: LOC115062722
location: 2431185..2431288
location: region:2431185-2431288:1
so has part: feature:2431185-2431288:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2431185-2431288:1:exon

LOC115062737
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062737
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2707551..2707683)
location: region:2707551-2707683:-1
so has part: feature:2707551-2707683:-1:exon
subclass of: SO_0000578

115062737
type: Gene
SIO_000068: ncbigene

position:2707551:-1
position: 2707551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2707683:-1
position: 2707683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2707551-2707683:-1:exon

LOC115062737
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snoRNA
gene: LOC115062737
product: small nucleolar RNA SNORA51
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00432
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842666.1
SIO_010081: LOC115062737
subclass of: SO_0000673
so part of: LOC115062737
location: complement(2707551..2707683)
location: region:2707551-2707683:-1
so has part: feature:2707551-2707683:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2707551-2707683:-1:exon

LOC110337748
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2728484..2728639
location: region:2728484-2728639:1
so has part: feature:2728484-2728639:1:exon

110337748
type: Gene
SIO_000068: ncbigene

position:2728484:1
position: 2728484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2728639:1
position: 2728639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2728484-2728639:1:exon

LOC110337748
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337748
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC110337748
subclass of: SO_0000673
so part of: LOC110337748
location: 2728484..2728639
location: region:2728484-2728639:1
so has part: feature:2728484-2728639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2728484-2728639:1:exon

Ttc29
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Ttc29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2821548..3007270
location: region:2821548-3007270:1
so has part: feature:2821548-3007270:1:exon
subclass of: SO_0000010

110337677
type: Gene
SIO_000068: ncbigene

position:2821548:1
position: 2821548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3007270:1
position: 3007270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2821548-3007270:1:exon

Ttc29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ttc29
product: tetratricopeptide repeat domain 29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021220729.1
SIO_010081: Ttc29
subclass of: SO_0000673
so part of: Ttc29
location: join(2821548..2821755,2822223..2822286,2826142..2826254,2826993..2827090,2828947..2829030,2854618..2854841,2860366..2860551,2888017..2888229,2893466..2893551,2927112..2927203,2937270..2937393,2946297..2946525,3006046..3006112,3006603..3007270)
location: region:2821548-3007270:1
so has part: feature:2821548-2821755:1:exon
so has part: feature:2822223-2822286:1:exon
so has part: feature:2826142-2826254:1:exon
so has part: feature:2826993-2827090:1:exon
so has part: feature:2828947-2829030:1:exon
so has part: feature:2854618-2854841:1:exon
so has part: feature:2860366-2860551:1:exon
so has part: feature:2888017-2888229:1:exon
so has part: feature:2893466-2893551:1:exon
so has part: feature:2927112-2927203:1:exon
so has part: feature:2937270-2937393:1:exon
so has part: feature:2946297-2946525:1:exon
so has part: feature:3006046-3006112:1:exon
so has part: feature:3006603-3007270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2821548-2821755:1:exon

position:2821755:1
position: 2821755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2822223-2822286:1:exon

position:2822223:1
position: 2822223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2822286:1
position: 2822286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2826142-2826254:1:exon

position:2826142:1
position: 2826142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2826254:1
position: 2826254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2826993-2827090:1:exon

position:2826993:1
position: 2826993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2827090:1
position: 2827090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2828947-2829030:1:exon

position:2828947:1
position: 2828947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2829030:1
position: 2829030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2854618-2854841:1:exon

position:2854618:1
position: 2854618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2854841:1
position: 2854841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2860366-2860551:1:exon

position:2860366:1
position: 2860366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2860551:1
position: 2860551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2888017-2888229:1:exon

position:2888017:1
position: 2888017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2888229:1
position: 2888229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2893466-2893551:1:exon

position:2893466:1
position: 2893466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2893551:1
position: 2893551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2927112-2927203:1:exon

position:2927112:1
position: 2927112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2927203:1
position: 2927203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2937270-2937393:1:exon

position:2937270:1
position: 2937270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2937393:1
position: 2937393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2946297-2946525:1:exon

position:2946297:1
position: 2946297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2946525:1
position: 2946525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3006046-3006112:1:exon

position:3006046:1
position: 3006046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3006112:1
position: 3006112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3006603-3007270:1:exon

position:3006603:1
position: 3006603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ttc29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ttc29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 29
translation: MATFPPLPMNRTRLAILARQKLPCSSKKTPRAQLIKEKEDIDYYLEQNFKGLSKEEVAAHRNSYKKSICVDMLRDGFHKSFTELFALMGQWDKLREAAKARSLFWQQRPLEEQPDKLDNFYHYLTRAEAAERKGYYEEVYNNLYALACYFDNSEDKWVRNHFYKRCFNIAQLIKADGGKKEAEAEEHMGLLFEEEGELLKAAEHYEAFHELTQGRLWKDDTGQLLNLVACESLVRTYRLLSDRMLENKDYKQAIKILIKASEIAREGNDRSMEGEASYYLGVAHLASGDYEVALTVLNRYSEIASSLDDDHSLGRAYKAIAKVLQSQGETAEAIKYLEKFVIIARNNFQNLDMIRACMMLGDIYNEKGQYSKASEYFQQAFSTAMELMQTALMDETKAHYGIARAHQMMLTMKSYIESADSNGLNCLLSWKETRTQIKYDPILGESRRATEDDIYQLPDVQEESRRSPENQ
SIO_010081: Ttc29
subclass of: SO_0000673
so part of: Ttc29
location: join(2826999..2827090,2828947..2829030,2854618..2854841,2860366..2860551,2888017..2888229,2893466..2893551,2927112..2927203,2937270..2937393,2946297..2946525,3006046..3006112,3006603..3006621)
location: region:2826999-3006621:1
so has part: feature:2826999-2827090:1:exon
so has part: feature:2828947-2829030:1:exon
so has part: feature:2854618-2854841:1:exon
so has part: feature:2860366-2860551:1:exon
so has part: feature:2888017-2888229:1:exon
so has part: feature:2893466-2893551:1:exon
so has part: feature:2927112-2927203:1:exon
so has part: feature:2937270-2937393:1:exon
so has part: feature:2946297-2946525:1:exon
so has part: feature:3006046-3006112:1:exon
so has part: feature:3006603-3006621:1:exon

XP_021076388.1
type: Protein
SIO_000068: ncbiprotein

position:2826999:1
position: 2826999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3006621:1
position: 3006621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2826999-2827090:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2828947-2829030:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2854618-2854841:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2860366-2860551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2888017-2888229:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2893466-2893551:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2927112-2927203:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2937270-2937393:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2946297-2946525:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3006046-3006112:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3006603-3006621:1:exon

Pou4f2
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Pou4f2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3044521..3048175)
location: region:3044521-3048175:-1
so has part: feature:3044521-3048175:-1:exon
subclass of: SO_0000010

110337539
type: Gene
SIO_000068: ncbigene

position:3044521:-1
position: 3044521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3048175:-1
position: 3048175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3044521-3048175:-1:exon

Pou4f2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Pou4f2
product: POU class 4 homeobox 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 11 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021220510.1
SIO_010081: Pou4f2
subclass of: SO_0000673
so part of: Pou4f2
location: complement(join(3044521..3047210,3047633..3048175))
location: region:3044521-3048175:-1
so has part: feature:3047633-3048175:-1:exon
so has part: feature:3044521-3047210:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3047633-3048175:-1:exon

position:3047633:-1
position: 3047633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3044521-3047210:-1:exon

position:3047210:-1
position: 3047210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pou4f2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Pou4f2
product: POU class 4 homeobox 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021220511.1
SIO_010081: Pou4f2
subclass of: SO_0000673
so part of: Pou4f2
location: complement(join(3046018..3047208,3047625..3047674,3047834..3047920))
location: region:3046018-3047920:-1
so has part: feature:3047834-3047920:-1:exon
so has part: feature:3047625-3047674:-1:exon
so has part: feature:3046018-3047208:-1:exon

position:3046018:-1
position: 3046018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3047920:-1
position: 3047920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3047834-3047920:-1:exon

position:3047834:-1
position: 3047834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3047625-3047674:-1:exon

position:3047625:-1
position: 3047625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3047674:-1
position: 3047674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3046018-3047208:-1:exon

position:3047208:-1
position: 3047208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pou4f2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Pou4f2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POU domain, class 4, transcription factor 2 isoform X1
translation: MMMMSLNSKQAFSMPHAGSLHVEPKYSALHSASPGSSAPAAPSASSPSSSSNAGGGGGGGGGGGGGGRSSSSSSSGSGGGGGGGGSEAMRRACLPTPPSNIFGGLDESLLARAEALAAVDIVSQSKSHHHHPPHHSPFKPDATYHTMNTIPCTSAASSSSVPISHPSALAGTHHHHHHHHHHHHQPHQALEGELLEHLSPGLALGAMAGPDGTVVSTPTHAPHMATMNPMHQAALSMAHAHGLPSHMGCMSDVDADPRDLEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAGI
SIO_010081: Pou4f2
subclass of: SO_0000673
so part of: Pou4f2
location: complement(join(3046269..3047210,3047633..3047926))
location: region:3046269-3047926:-1
so has part: feature:3047633-3047926:-1:exon
so has part: feature:3046269-3047210:-1:exon

XP_021076169.1
type: Protein
SIO_000068: ncbiprotein

position:3046269:-1
position: 3046269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3047926:-1
position: 3047926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3047633-3047926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3046269-3047210:-1:exon

Pou4f2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Pou4f2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POU domain, class 4, transcription factor 2 isoform X2
translation: MMSLNSKQAFSMPHAGSLHVEPKYSALHSGSEAMRRACLPTPPVRINIFGGLDESLLARAEALAAVDIVSQSKSHHHHPPHHSPFKPDATYHTMNTIPCTSAASSSSVPISHPSALAGTHHHHHHHHHHHHQPHQALEGELLEHLSPGLALGAMAGPDGTVVSTPTHAPHMATMNPMHQAALSMAHAHGLPSHMGCMSDVDADPRDLEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAGI
SIO_010081: Pou4f2
subclass of: SO_0000673
so part of: Pou4f2
location: complement(join(3046269..3047208,3047625..3047674,3047834..3047920))
location: region:3046269-3047920:-1
so has part: feature:3047834-3047920:-1:exon
so has part: feature:3047625-3047674:-1:exon
so has part: feature:3046269-3047208:-1:exon

XP_021076170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3047834-3047920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3047625-3047674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3046269-3047208:-1:exon

LOC110337469
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3122681..3126348)
location: region:3122681-3126348:-1
so has part: feature:3122681-3126348:-1:exon
subclass of: SO_0000010

110337469
type: Gene
SIO_000068: ncbigene

position:3122681:-1
position: 3122681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3126348:-1
position: 3126348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3122681-3126348:-1:exon

LOC110337469
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: LOC110337469
product: RNA binding motif protein, X-linked-like-1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 mRNAs, 33 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021220401.1
SIO_010081: LOC110337469
subclass of: SO_0000673
so part of: LOC110337469
location: complement(join(3122681..3124230,3126219..3126348))
location: region:3122681-3126348:-1
so has part: feature:3126219-3126348:-1:exon
so has part: feature:3122681-3124230:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3126219-3126348:-1:exon

position:3126219:-1
position: 3126219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3122681-3124230:-1:exon

position:3124230:-1
position: 3124230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110337469
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: LOC110337469
product: RNA binding motif protein, X-linked-like-1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 mRNAs, 33 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021220400.1
SIO_010081: LOC110337469
subclass of: SO_0000673
so part of: LOC110337469
location: complement(join(3122681..3124276,3126219..3126348))
location: region:3122681-3126348:-1
so has part: feature:3126219-3126348:-1:exon
so has part: feature:3122681-3124276:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3126219-3126348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3122681-3124276:-1:exon

position:3124276:-1
position: 3124276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110337469
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: LOC110337469
product: RNA binding motif protein, X-linked-like-1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 mRNAs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021220402.2
SIO_010081: LOC110337469
subclass of: SO_0000673
so part of: LOC110337469
location: complement(join(3122681..3124230,3125321..3126166))
location: region:3122681-3126166:-1
so has part: feature:3125321-3126166:-1:exon
so has part: feature:3122681-3124230:-1:exon

position:3126166:-1
position: 3126166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3125321-3126166:-1:exon

position:3125321:-1
position: 3125321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3122681-3124230:-1:exon

LOC110337469
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: LOC110337469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA binding motif protein, X-linked-like-1
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPPPKRSTPSGPVRSSSGMGGRTPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYSHSSSRDDYPSRGYGDRDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPPTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSGRDRVGRQERGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: LOC110337469
subclass of: SO_0000673
so part of: LOC110337469
location: complement(3122958..3124124)
location: region:3122958-3124124:-1
so has part: feature:3122958-3124124:-1:exon

XP_021076059.1
type: Protein
SIO_000068: ncbiprotein

position:3122958:-1
position: 3122958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3124124:-1
position: 3124124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3122958-3124124:-1:exon

LOC110337469
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: LOC110337469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA binding motif protein, X-linked-like-1
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPPPKRSTPSGPVRSSSGMGGRTPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYSHSSSRDDYPSRGYGDRDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPPTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSGRDRVGRQERGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: LOC110337469
subclass of: SO_0000673
so part of: LOC110337469
location: complement(3122958..3124124)
location: region:3122958-3124124:-1
so has part: feature:3122958-3124124:-1:exon

XP_021076060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3122958-3124124:-1:exon

LOC110337469
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: LOC110337469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA binding motif protein, X-linked-like-1
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPPPKRSTPSGPVRSSSGMGGRTPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYSHSSSRDDYPSRGYGDRDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPPTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSGRDRVGRQERGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: LOC110337469
subclass of: SO_0000673
so part of: LOC110337469
location: complement(3122958..3124124)
location: region:3122958-3124124:-1
so has part: feature:3122958-3124124:-1:exon

XP_021076061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3122958-3124124:-1:exon

Slc10a7
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Slc10a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3126751..3361019
location: region:3126751-3361019:1
so has part: feature:3126751-3361019:1:exon
subclass of: SO_0000010

110337302
type: Gene
SIO_000068: ncbigene

position:3126751:1
position: 3126751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3361019:1
position: 3361019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3126751-3361019:1:exon

Slc10a7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Slc10a7
product: solute carrier family 10 member 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021220146.1
SIO_010081: Slc10a7
subclass of: SO_0000673
so part of: Slc10a7
location: join(3126751..3127103,3133455..3133537,3141437..3141573,3147718..3147793,3195546..3195584,3291094..3291129,3312568..3312651,3323757..3323922,3324915..3324966,3334141..3334214,3356628..3356773,3358594..3361019)
location: region:3126751-3361019:1
so has part: feature:3126751-3127103:1:exon
so has part: feature:3133455-3133537:1:exon
so has part: feature:3141437-3141573:1:exon
so has part: feature:3147718-3147793:1:exon
so has part: feature:3195546-3195584:1:exon
so has part: feature:3291094-3291129:1:exon
so has part: feature:3312568-3312651:1:exon
so has part: feature:3323757-3323922:1:exon
so has part: feature:3324915-3324966:1:exon
so has part: feature:3334141-3334214:1:exon
so has part: feature:3356628-3356773:1:exon
so has part: feature:3358594-3361019:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3126751-3127103:1:exon

position:3127103:1
position: 3127103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3133455-3133537:1:exon

position:3133455:1
position: 3133455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3133537:1
position: 3133537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3141437-3141573:1:exon

position:3141437:1
position: 3141437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3141573:1
position: 3141573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3147718-3147793:1:exon

position:3147718:1
position: 3147718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3147793:1
position: 3147793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3195546-3195584:1:exon

position:3195546:1
position: 3195546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3195584:1
position: 3195584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3291094-3291129:1:exon

position:3291094:1
position: 3291094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3291129:1
position: 3291129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3312568-3312651:1:exon

position:3312568:1
position: 3312568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3312651:1
position: 3312651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3323757-3323922:1:exon

position:3323757:1
position: 3323757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3323922:1
position: 3323922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3324915-3324966:1:exon

position:3324915:1
position: 3324915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3324966:1
position: 3324966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3334141-3334214:1:exon

position:3334141:1
position: 3334141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3334214:1
position: 3334214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3356628-3356773:1:exon

position:3356628:1
position: 3356628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3356773:1
position: 3356773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3358594-3361019:1:exon

position:3358594:1
position: 3358594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slc10a7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Slc10a7
product: solute carrier family 10 member 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029532633.1
SIO_010081: Slc10a7
subclass of: SO_0000673
so part of: Slc10a7
location: join(3126751..3127103,3133455..3133537,3141437..3141573,3147718..3147793,3195546..3195584,3291094..3291129,3312568..3312651,3315983..3316125)
location: region:3126751-3316125:1
so has part: feature:3126751-3127103:1:exon
so has part: feature:3133455-3133537:1:exon
so has part: feature:3141437-3141573:1:exon
so has part: feature:3147718-3147793:1:exon
so has part: feature:3195546-3195584:1:exon
so has part: feature:3291094-3291129:1:exon
so has part: feature:3312568-3312651:1:exon
so has part: feature:3315983-3316125:1:exon

position:3316125:1
position: 3316125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3126751-3127103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3133455-3133537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3141437-3141573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3147718-3147793:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3195546-3195584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3291094-3291129:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3312568-3312651:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3315983-3316125:1:exon

position:3315983:1
position: 3315983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slc10a7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Slc10a7
product: solute carrier family 10 member 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029532634.1
SIO_010081: Slc10a7
subclass of: SO_0000673
so part of: Slc10a7
location: join(3126811..3127103,3133455..3133537,3147718..3147792)
location: region:3126811-3147792:1
so has part: feature:3126811-3127103:1:exon
so has part: feature:3133455-3133537:1:exon
so has part: feature:3147718-3147792:1:exon

position:3126811:1
position: 3126811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3147792:1
position: 3147792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3126811-3127103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3133455-3133537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3147718-3147792:1:exon

Slc10a7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Slc10a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/bile acid cotransporter 7 isoform X1
translation: MRLLERARKEWFMVGIVVAIGAAKLEPSVGVNGGPLKPEITVSYIAVATIFFNSGLSLKTEELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSVTSINEWLLKGLQTVGCMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFLGIVVTPVLLLLFLGSSSSVPFTSIFSQLFMTVVVPLVIGQIVRRYIKDWLERKKPPFGVVSSSVLLMIIYTTFCDTFSNPNIDLDKLSLILILFIIVSVQLSFMLLTFIFSTRNNSGFTPADTVAIIFCSTHKSLTLGIPMLKIVFAGHEHLSLISVPLLIYHPAQILLGSVLVPTIKSWMVSRQKGVKLTRPTV
SIO_010081: Slc10a7
subclass of: SO_0000673
so part of: Slc10a7
location: join(3127004..3127103,3133455..3133537,3141437..3141573,3147718..3147793,3195546..3195584,3291094..3291129,3312568..3312651,3323757..3323922,3324915..3324966,3334141..3334214,3356628..3356773,3358594..3358623)
location: region:3127004-3358623:1
so has part: feature:3127004-3127103:1:exon
so has part: feature:3133455-3133537:1:exon
so has part: feature:3141437-3141573:1:exon
so has part: feature:3147718-3147793:1:exon
so has part: feature:3195546-3195584:1:exon
so has part: feature:3291094-3291129:1:exon
so has part: feature:3312568-3312651:1:exon
so has part: feature:3323757-3323922:1:exon
so has part: feature:3324915-3324966:1:exon
so has part: feature:3334141-3334214:1:exon
so has part: feature:3356628-3356773:1:exon
so has part: feature:3358594-3358623:1:exon

XP_021075805.1
type: Protein
SIO_000068: ncbiprotein

position:3127004:1
position: 3127004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3358623:1
position: 3358623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3127004-3127103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3133455-3133537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3141437-3141573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3147718-3147793:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3195546-3195584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3291094-3291129:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3312568-3312651:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3323757-3323922:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3324915-3324966:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3334141-3334214:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3356628-3356773:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3358594-3358623:1:exon

Slc10a7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Slc10a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/bile acid cotransporter 7 isoform X2
translation: MRLLERARKEWFMVGIVVAIGAAKLEPSVGVNGGPLKPEITVSYIAVATIFFNSGLSLKTEELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSVTSINEWLLKGLQTVGCMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFLGIVVTPVLLLLFLGSSSSVPFTSIFSQLFMTVVVPLVIGQVLLSWHL
SIO_010081: Slc10a7
subclass of: SO_0000673
so part of: Slc10a7
location: join(3127004..3127103,3133455..3133537,3141437..3141573,3147718..3147793,3195546..3195584,3291094..3291129,3312568..3312651,3315983..3316006)
location: region:3127004-3316006:1
so has part: feature:3127004-3127103:1:exon
so has part: feature:3133455-3133537:1:exon
so has part: feature:3141437-3141573:1:exon
so has part: feature:3147718-3147793:1:exon
so has part: feature:3195546-3195584:1:exon
so has part: feature:3291094-3291129:1:exon
so has part: feature:3312568-3312651:1:exon
so has part: feature:3315983-3316006:1:exon

XP_029388493.1
type: Protein
SIO_000068: ncbiprotein

position:3316006:1
position: 3316006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3127004-3127103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3133455-3133537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3141437-3141573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3147718-3147793:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3195546-3195584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3291094-3291129:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3312568-3312651:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3315983-3316006:1:exon

Slc10a7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Slc10a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/bile acid cotransporter 7 isoform X3
translation: MRLLERARKEWFMVGIVVAIGAAKLEPSVGVNGGPLKPEITVSYIAVATIFFNSGLSLKTESADSRLHATPCVFCRHFNQGSWWK
SIO_010081: Slc10a7
subclass of: SO_0000673
so part of: Slc10a7
location: join(3127004..3127103,3133455..3133537,3147718..3147792)
location: region:3127004-3147792:1
so has part: feature:3127004-3127103:1:exon
so has part: feature:3133455-3133537:1:exon
so has part: feature:3147718-3147792:1:exon

XP_029388494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3127004-3127103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3133455-3133537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3147718-3147792:1:exon

Reeld1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Reeld1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3385484..3410301)
location: region:3385484-3410301:-1
so has part: feature:3385484-3410301:-1:exon
subclass of: SO_0000010

115062703
type: Gene
SIO_000068: ncbigene

position:3385484:-1
position: 3385484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3410301:-1
position: 3410301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3385484-3410301:-1:exon

Reeld1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Reeld1
product: reeler domain containing 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_029532717.1
SIO_010081: Reeld1
subclass of: SO_0000673
so part of: Reeld1
location: complement(join(3385484..3385701,3386575..3386827,3386936..3387023,3387791..3387851,3388327..3388464,3407417..3407639,3410094..3410301))
location: region:3385484-3410301:-1
so has part: feature:3410094-3410301:-1:exon
so has part: feature:3407417-3407639:-1:exon
so has part: feature:3388327-3388464:-1:exon
so has part: feature:3387791-3387851:-1:exon
so has part: feature:3386936-3387023:-1:exon
so has part: feature:3386575-3386827:-1:exon
so has part: feature:3385484-3385701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3410094-3410301:-1:exon

position:3410094:-1
position: 3410094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3407417-3407639:-1:exon

position:3407417:-1
position: 3407417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3407639:-1
position: 3407639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3388327-3388464:-1:exon

position:3388327:-1
position: 3388327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3388464:-1
position: 3388464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3387791-3387851:-1:exon

position:3387791:-1
position: 3387791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3387851:-1
position: 3387851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3386936-3387023:-1:exon

position:3386936:-1
position: 3386936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3387023:-1
position: 3387023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3386575-3386827:-1:exon

position:3386575:-1
position: 3386575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3386827:-1
position: 3386827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3385484-3385701:-1:exon

position:3385701:-1
position: 3385701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Reeld1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Reeld1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: reelin domain-containing protein 1
translation: MRILAVLASWTCATLTLASCLAAFSHGSSTQAWEDMWPRHTQTESKHPGSHHITIHTSRPSYLPGAKIPVSVQSSRDATGFLLRAHSAAGHQIVGTFVFTPRHSKLMTCSGETDTATHSDDTPKRTLLFMWKALAQPVGDIRFLNGQQLSREINPILQLSLDVYKLEMLVTLRKGSLDRDVSILSTHHRSQNDLSFDSLETCLPLDKGEQDKMTASNRSVMGPAPHTARIPEPQQVWSHSQGAECGGDTAEGGMGYLSKTDLRPEVMQLRTPQLEIPICLSVTLGVALAAGFSFLCPQYCHKQTEVSSSEPTVDAVGDGDRRAGAADVGLPSVYSDEGRVASSSWQACCILSKVRLKMTNHYLAYLGKKASLMKTICSPDFVKLVWFDKGCTGTA
SIO_010081: Reeld1
subclass of: SO_0000673
so part of: Reeld1
location: complement(join(3385484..3385701,3386575..3386827,3386936..3387023,3387791..3387851,3388327..3388464,3407417..3407639,3410094..3410301))
location: region:3385484-3410301:-1
so has part: feature:3410094-3410301:-1:exon
so has part: feature:3407417-3407639:-1:exon
so has part: feature:3388327-3388464:-1:exon
so has part: feature:3387791-3387851:-1:exon
so has part: feature:3386936-3387023:-1:exon
so has part: feature:3386575-3386827:-1:exon
so has part: feature:3385484-3385701:-1:exon

XP_029388577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3410094-3410301:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3407417-3407639:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3388327-3388464:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3387791-3387851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3386936-3387023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3386575-3386827:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3385484-3385701:-1:exon

LOC115062708
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062708
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3412997..3413214)
location: region:3412997-3413214:-1
so has part: feature:3412997-3413214:-1:exon

115062708
type: Gene
SIO_000068: ncbigene

position:3412997:-1
position: 3412997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3413214:-1
position: 3413214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3412997-3413214:-1:exon

LOC115062708
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC115062708
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC115062708
subclass of: SO_0000673
so part of: LOC115062708
location: complement(3412997..3413214)
location: region:3412997-3413214:-1
so has part: feature:3412997-3413214:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3412997-3413214:-1:exon

Lsm6
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Lsm6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3435767..3450944)
location: region:3435767-3450944:-1
so has part: feature:3435767-3450944:-1:exon
subclass of: SO_0000010

110337487
type: Gene
SIO_000068: ncbigene

position:3435767:-1
position: 3435767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3450944:-1
position: 3450944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3435767-3450944:-1:exon

Lsm6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Lsm6
product: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 9 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021220433.2
SIO_010081: Lsm6
subclass of: SO_0000673
so part of: Lsm6
location: complement(join(3435767..3437438,3439076..3439189,3442099..3442203,3450840..3450944))
location: region:3435767-3450944:-1
so has part: feature:3450840-3450944:-1:exon
so has part: feature:3442099-3442203:-1:exon
so has part: feature:3439076-3439189:-1:exon
so has part: feature:3435767-3437438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3450840-3450944:-1:exon

position:3450840:-1
position: 3450840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3442099-3442203:-1:exon

position:3442099:-1
position: 3442099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3442203:-1
position: 3442203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3439076-3439189:-1:exon

position:3439076:-1
position: 3439076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3439189:-1
position: 3439189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3435767-3437438:-1:exon

position:3437438:-1
position: 3437438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Lsm6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Lsm6
product: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 9 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021220432.2
SIO_010081: Lsm6
subclass of: SO_0000673
so part of: Lsm6
location: complement(join(3437254..3437438,3439076..3439189,3442099..3442203,3449824..3449925,3450840..3450944))
location: region:3437254-3450944:-1
so has part: feature:3450840-3450944:-1:exon
so has part: feature:3449824-3449925:-1:exon
so has part: feature:3442099-3442203:-1:exon
so has part: feature:3439076-3439189:-1:exon
so has part: feature:3437254-3437438:-1:exon

position:3437254:-1
position: 3437254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3450840-3450944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3449824-3449925:-1:exon

position:3449824:-1
position: 3449824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3449925:-1
position: 3449925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3442099-3442203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3439076-3439189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3437254-3437438:-1:exon

Lsm6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Lsm6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U6 snRNA-associated Sm-like protein LSm6
translation: MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRRM
SIO_010081: Lsm6
subclass of: SO_0000673
so part of: Lsm6
location: complement(join(3437404..3437438,3439076..3439189,3442099..3442192))
location: region:3437404-3442192:-1
so has part: feature:3442099-3442192:-1:exon
so has part: feature:3439076-3439189:-1:exon
so has part: feature:3437404-3437438:-1:exon

XP_021076091.1
type: Protein
SIO_000068: ncbiprotein

position:3437404:-1
position: 3437404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3442192:-1
position: 3442192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3442099-3442192:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3439076-3439189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3437404-3437438:-1:exon

Lsm6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Lsm6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U6 snRNA-associated Sm-like protein LSm6
translation: MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRRM
SIO_010081: Lsm6
subclass of: SO_0000673
so part of: Lsm6
location: complement(join(3437404..3437438,3439076..3439189,3442099..3442192))
location: region:3437404-3442192:-1
so has part: feature:3442099-3442192:-1:exon
so has part: feature:3439076-3439189:-1:exon
so has part: feature:3437404-3437438:-1:exon

XP_021076092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3442099-3442192:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3439076-3439189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3437404-3437438:-1:exon

LOC110337767
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3615563..3616429)
location: region:3615563-3616429:-1
so has part: feature:3615563-3616429:-1:exon

110337767
type: Gene
SIO_000068: ncbigene

position:3615563:-1
position: 3615563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3616429:-1
position: 3616429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3615563-3616429:-1:exon

LOC110337767
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337767
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC110337767
subclass of: SO_0000673
so part of: LOC110337767
location: complement(3615563..3616429)
location: region:3615563-3616429:-1
so has part: feature:3615563-3616429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3615563-3616429:-1:exon

Znf827
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Znf827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3657089..3831377
location: region:3657089-3831377:1
so has part: feature:3657089-3831377:1:exon
subclass of: SO_0000010

110337381
type: Gene
SIO_000068: ncbigene

position:3657089:1
position: 3657089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3831377:1
position: 3831377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3657089-3831377:1:exon

Znf827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Znf827
product: zinc finger protein 827, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021220257.2
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(3657089..3657598,3693316..3694353,3702970..3703142,3708593..3709073,3725179..3725412,3754543..3754782,3756798..3756855,3775410..3775513,3816841..3816978,3819910..3820081,3821041..3821207,3826504..3826695,3827047..3827224,3829042..3829074,3830523..3831377)
location: region:3657089-3831377:1
so has part: feature:3657089-3657598:1:exon
so has part: feature:3693316-3694353:1:exon
so has part: feature:3702970-3703142:1:exon
so has part: feature:3708593-3709073:1:exon
so has part: feature:3725179-3725412:1:exon
so has part: feature:3754543-3754782:1:exon
so has part: feature:3756798-3756855:1:exon
so has part: feature:3775410-3775513:1:exon
so has part: feature:3816841-3816978:1:exon
so has part: feature:3819910-3820081:1:exon
so has part: feature:3821041-3821207:1:exon
so has part: feature:3826504-3826695:1:exon
so has part: feature:3827047-3827224:1:exon
so has part: feature:3829042-3829074:1:exon
so has part: feature:3830523-3831377:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3657089-3657598:1:exon

position:3657598:1
position: 3657598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3693316-3694353:1:exon

position:3693316:1
position: 3693316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3694353:1
position: 3694353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3702970-3703142:1:exon

position:3702970:1
position: 3702970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3703142:1
position: 3703142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3708593-3709073:1:exon

position:3708593:1
position: 3708593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3709073:1
position: 3709073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3725179-3725412:1:exon

position:3725179:1
position: 3725179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3725412:1
position: 3725412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3754543-3754782:1:exon

position:3754543:1
position: 3754543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3754782:1
position: 3754782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3756798-3756855:1:exon

position:3756798:1
position: 3756798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3756855:1
position: 3756855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3775410-3775513:1:exon

position:3775410:1
position: 3775410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3775513:1
position: 3775513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3816841-3816978:1:exon

position:3816841:1
position: 3816841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3816978:1
position: 3816978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3819910-3820081:1:exon

position:3819910:1
position: 3819910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3820081:1
position: 3820081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3821041-3821207:1:exon

position:3821041:1
position: 3821041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3821207:1
position: 3821207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3826504-3826695:1:exon

position:3826504:1
position: 3826504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3826695:1
position: 3826695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3827047-3827224:1:exon

position:3827047:1
position: 3827047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3827224:1
position: 3827224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3829042-3829074:1:exon

position:3829042:1
position: 3829042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3829074:1
position: 3829074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3830523-3831377:1:exon

position:3830523:1
position: 3830523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Znf827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Znf827
product: zinc finger protein 827, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029532365.1
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(3657089..3657598,3693316..3694353,3702970..3703142,3708593..3709073,3725179..3725412,3754543..3754782,3756798..3756855,3775410..3775513,3816841..3816978,3819910..3820081,3821041..3821207,3826504..3826695,3827047..3827224,3830523..3831377)
location: region:3657089-3831377:1
so has part: feature:3657089-3657598:1:exon
so has part: feature:3693316-3694353:1:exon
so has part: feature:3702970-3703142:1:exon
so has part: feature:3708593-3709073:1:exon
so has part: feature:3725179-3725412:1:exon
so has part: feature:3754543-3754782:1:exon
so has part: feature:3756798-3756855:1:exon
so has part: feature:3775410-3775513:1:exon
so has part: feature:3816841-3816978:1:exon
so has part: feature:3819910-3820081:1:exon
so has part: feature:3821041-3821207:1:exon
so has part: feature:3826504-3826695:1:exon
so has part: feature:3827047-3827224:1:exon
so has part: feature:3830523-3831377:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3657089-3657598:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3693316-3694353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3702970-3703142:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3708593-3709073:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3725179-3725412:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3754543-3754782:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3756798-3756855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3775410-3775513:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3816841-3816978:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3819910-3820081:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3821041-3821207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3826504-3826695:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3827047-3827224:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3830523-3831377:1:exon

Znf827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Znf827
product: zinc finger protein 827, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532366.1
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(3657089..3657598,3693316..3694353,3702970..3703142,3708593..3709073,3725179..3725412,3754543..3754782,3756798..3756855,3775410..3775513,3816841..3816978,3819910..3820081,3821041..3821207,3826504..3826695,3827047..3827237,3830523..3830597)
location: region:3657089-3830597:1
so has part: feature:3657089-3657598:1:exon
so has part: feature:3693316-3694353:1:exon
so has part: feature:3702970-3703142:1:exon
so has part: feature:3708593-3709073:1:exon
so has part: feature:3725179-3725412:1:exon
so has part: feature:3754543-3754782:1:exon
so has part: feature:3756798-3756855:1:exon
so has part: feature:3775410-3775513:1:exon
so has part: feature:3816841-3816978:1:exon
so has part: feature:3819910-3820081:1:exon
so has part: feature:3821041-3821207:1:exon
so has part: feature:3826504-3826695:1:exon
so has part: feature:3827047-3827237:1:exon
so has part: feature:3830523-3830597:1:exon

position:3830597:1
position: 3830597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3657089-3657598:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3693316-3694353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3702970-3703142:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3708593-3709073:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3725179-3725412:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3754543-3754782:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3756798-3756855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3775410-3775513:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3816841-3816978:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3819910-3820081:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3821041-3821207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3826504-3826695:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3827047-3827237:1:exon

position:3827237:1
position: 3827237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3830523-3830597:1:exon

Znf827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Znf827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 827 isoform X1
translation: MPRRKQEQPKRLPSHVSGQDEAEGDFSEGEQWYGNSSETPSEASYGEVQENYKLSLEDRIREQSTSPDTSLGSATPSSHTLELVALDGEVLRDSLQCQGHLSPGVSSVCDDDPPSSNKPLSSNLRRLLEAGSLKLDGTANGRVESPVNVGPSLSFSPPSHHAQQLSVLARKLAEKQDQSDQFTPSNRFIWNQGKWLPNSTTTCGLSPDSAILKLKAAANAVLQDKSLSRTEESLRFESFSSPFSSQSASSTLAALSKKVSERSLTPGQEHPPPASSFLSLASMTSSAALLKEVAARAAGSLLAEKASLLPDDPLPLPPSEKKPEKVTPPPPPPPPTAQPQSLELLLLPVSKGRVSKPSNSAPEEESGKPFQCPICGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCQLCPFTSSRHFSLKLHMRCHQHFLRTEAKVKEEIPDPDVKGSPHLSDSGCLGQQREGGGTELVGTVMTSNTPERTGQGGAGVAPLLVKEEPKEDNGLPTSFTLNAADRPANHTKLKDPSEYVSNSAAALFSQDISVKMASDFLMKLSAANQKEPMNLNFKVKEEPTEEESLSMPLPRSSYVFSPEPEVSTPSISEDPLTPQEGKGNVLRRDMSAKAASELLMKLSAESYKETQAVTVKEEPMEVDIQDSPASISPSRNVGYSTLMGREKTEPLQKLPEGRVPPERNLFSQDISVKMASELLFQLSEKVSKEHNHTKENAMRTTTSPFFSEDTFRQSPFTSNSKDLLPGESVLHGRASAPETEKIVLEAGNGLPSWKFNDQLFPCDVCGKVFGRQQTLSRHLSLHTEERKYKCHLCPYAAKCRANLNQHLTVHSVKLVSTDTEDIVSAVTSEGSDGKKHPYYYSCHVCGFETELNVQFVSHMSLHVDKEQWMFSICCTACDFVTMEEADIKTHIGTKHTGDDRKTPSESNSPSSSSLSTLSDSANGKDDSDSSQKSKGGNNLLVISVVPGNQPSLNNEEKPEKGFECVFCNFVCKTKNMFERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPTGGLKCPFCIYSTNRPAAMECHLKTHYKMEYKCRICQTVKANQLELETHTREHRLGNHYKCEQCGYLSKTANKLIEHVRVHTGERPFHCDQCSYSCKRKDNLNLHRKLKHAPRQTFSCGECLFKTTHPFVFSRHVKKHQSGDGPEEDKKGLSPASREPAGPGAPLLVVGGGRSLLSPLSVMSASQALQTVALSAAHGSSSEPNLALKALAFSGSPLHLDKYRNSDVAHLIPLTMLYPRNHLDLTFHPPRPQTAPPSIPSPKHSFLAYLGLRERAGTV
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(3657556..3657598,3693316..3694353,3702970..3703142,3708593..3709073,3725179..3725412,3754543..3754782,3756798..3756855,3775410..3775513,3816841..3816978,3819910..3820081,3821041..3821207,3826504..3826695,3827047..3827224,3830523..3831342)
location: region:3657556-3831342:1
so has part: feature:3657556-3657598:1:exon
so has part: feature:3693316-3694353:1:exon
so has part: feature:3702970-3703142:1:exon
so has part: feature:3708593-3709073:1:exon
so has part: feature:3725179-3725412:1:exon
so has part: feature:3754543-3754782:1:exon
so has part: feature:3756798-3756855:1:exon
so has part: feature:3775410-3775513:1:exon
so has part: feature:3816841-3816978:1:exon
so has part: feature:3819910-3820081:1:exon
so has part: feature:3821041-3821207:1:exon
so has part: feature:3826504-3826695:1:exon
so has part: feature:3827047-3827224:1:exon
so has part: feature:3830523-3831342:1:exon

XP_029388225.1
type: Protein
SIO_000068: ncbiprotein

position:3657556:1
position: 3657556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3831342:1
position: 3831342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3657556-3657598:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3693316-3694353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3702970-3703142:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3708593-3709073:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3725179-3725412:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3754543-3754782:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3756798-3756855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3775410-3775513:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3816841-3816978:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3819910-3820081:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3821041-3821207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3826504-3826695:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3827047-3827224:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3830523-3831342:1:exon

Znf827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Znf827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 827 isoform X2
translation: MPRRKQEQPKRLPSHVSGQDEAEGDFSEGEQWYGNSSETPSEASYGEVQENYKLSLEDRIREQSTSPDTSLGSATPSSHTLELVALDGEVLRDSLQCQGHLSPGVSSVCDDDPPSSNKPLSSNLRRLLEAGSLKLDGTANGRVESPVNVGPSLSFSPPSHHAQQLSVLARKLAEKQDQSDQFTPSNRFIWNQGKWLPNSTTTCGLSPDSAILKLKAAANAVLQDKSLSRTEESLRFESFSSPFSSQSASSTLAALSKKVSERSLTPGQEHPPPASSFLSLASMTSSAALLKEVAARAAGSLLAEKASLLPDDPLPLPPSEKKPEKVTPPPPPPPPTAQPQSLELLLLPVSKGRVSKPSNSAPEEESGKPFQCPICGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCQLCPFTSSRHFSLKLHMRCHQHFLRTEAKVKEEIPDPDVKGSPHLSDSGCLGQQREGGGTELVGTVMTSNTPERTGQGGAGVAPLLVKEEPKEDNGLPTSFTLNAADRPANHTKLKDPSEYVSNSAAALFSQDISVKMASDFLMKLSAANQKEPMNLNFKVKEEPTEEESLSMPLPRSSYVFSPEPEVSTPSISEDPLTPQEGKGNVLRRDMSAKAASELLMKLSAESYKETQAVTVKEEPMEVDIQDSPASISPSRNVGYSTLMGREKTEPLQKLPEGRVPPERNLFSQDISVKMASELLFQLSEKVSKEHNHTKENAMRTTTSPFFSEDTFRQSPFTSNSKDLLPGESVLHGRASAPETEKIVLEAGNGLPSWKFNDQLFPCDVCGKVFGRQQTLSRHLSLHTEERKYKCHLCPYAAKCRANLNQHLTVHSVKLVSTDTEDIVSAVTSEGSDGKKHPYYYSCHVCGFETELNVQFVSHMSLHVDKEQWMFSICCTACDFVTMEEADIKTHIGTKHTGDDRKTPSESNSPSSSSLSTLSDSANGKDDSDSSQKSKGGNNLLVISVVPGNQPSLNNEEKPEKGFECVFCNFVCKTKNMFERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPTGGLNSGQW
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(3657556..3657598,3693316..3694353,3702970..3703142,3708593..3709073,3725179..3725412,3754543..3754782,3756798..3756855,3775410..3775513,3816841..3816978,3819910..3820081,3821041..3821207,3826504..3826695,3827047..3827224,3829042..3829057)
location: region:3657556-3829057:1
so has part: feature:3657556-3657598:1:exon
so has part: feature:3693316-3694353:1:exon
so has part: feature:3702970-3703142:1:exon
so has part: feature:3708593-3709073:1:exon
so has part: feature:3725179-3725412:1:exon
so has part: feature:3754543-3754782:1:exon
so has part: feature:3756798-3756855:1:exon
so has part: feature:3775410-3775513:1:exon
so has part: feature:3816841-3816978:1:exon
so has part: feature:3819910-3820081:1:exon
so has part: feature:3821041-3821207:1:exon
so has part: feature:3826504-3826695:1:exon
so has part: feature:3827047-3827224:1:exon
so has part: feature:3829042-3829057:1:exon

XP_021075916.1
type: Protein
SIO_000068: ncbiprotein

position:3829057:1
position: 3829057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3657556-3657598:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3693316-3694353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3702970-3703142:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3708593-3709073:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3725179-3725412:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3754543-3754782:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3756798-3756855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3775410-3775513:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3816841-3816978:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3819910-3820081:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3821041-3821207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3826504-3826695:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3827047-3827224:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3829042-3829057:1:exon

Znf827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Znf827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 827 isoform X3
translation: MPRRKQEQPKRLPSHVSGQDEAEGDFSEGEQWYGNSSETPSEASYGEVQENYKLSLEDRIREQSTSPDTSLGSATPSSHTLELVALDGEVLRDSLQCQGHLSPGVSSVCDDDPPSSNKPLSSNLRRLLEAGSLKLDGTANGRVESPVNVGPSLSFSPPSHHAQQLSVLARKLAEKQDQSDQFTPSNRFIWNQGKWLPNSTTTCGLSPDSAILKLKAAANAVLQDKSLSRTEESLRFESFSSPFSSQSASSTLAALSKKVSERSLTPGQEHPPPASSFLSLASMTSSAALLKEVAARAAGSLLAEKASLLPDDPLPLPPSEKKPEKVTPPPPPPPPTAQPQSLELLLLPVSKGRVSKPSNSAPEEESGKPFQCPICGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCQLCPFTSSRHFSLKLHMRCHQHFLRTEAKVKEEIPDPDVKGSPHLSDSGCLGQQREGGGTELVGTVMTSNTPERTGQGGAGVAPLLVKEEPKEDNGLPTSFTLNAADRPANHTKLKDPSEYVSNSAAALFSQDISVKMASDFLMKLSAANQKEPMNLNFKVKEEPTEEESLSMPLPRSSYVFSPEPEVSTPSISEDPLTPQEGKGNVLRRDMSAKAASELLMKLSAESYKETQAVTVKEEPMEVDIQDSPASISPSRNVGYSTLMGREKTEPLQKLPEGRVPPERNLFSQDISVKMASELLFQLSEKVSKEHNHTKENAMRTTTSPFFSEDTFRQSPFTSNSKDLLPGESVLHGRASAPETEKIVLEAGNGLPSWKFNDQLFPCDVCGKVFGRQQTLSRHLSLHTEERKYKCHLCPYAAKCRANLNQHLTVHSVKLVSTDTEDIVSAVTSEGSDGKKHPYYYSCHVCGFETELNVQFVSHMSLHVDKEQWMFSICCTACDFVTMEEADIKTHIGTKHTGDDRKTPSESNSPSSSSLSTLSDSANGKDDSDSSQKSKGGNNLLVISVVPGNQPSLNNEEKPEKGFECVFCNFVCKTKNMFERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPTGGLK
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(3657556..3657598,3693316..3694353,3702970..3703142,3708593..3709073,3725179..3725412,3754543..3754782,3756798..3756855,3775410..3775513,3816841..3816978,3819910..3820081,3821041..3821207,3826504..3826695,3827047..3827228)
location: region:3657556-3827228:1
so has part: feature:3657556-3657598:1:exon
so has part: feature:3693316-3694353:1:exon
so has part: feature:3702970-3703142:1:exon
so has part: feature:3708593-3709073:1:exon
so has part: feature:3725179-3725412:1:exon
so has part: feature:3754543-3754782:1:exon
so has part: feature:3756798-3756855:1:exon
so has part: feature:3775410-3775513:1:exon
so has part: feature:3816841-3816978:1:exon
so has part: feature:3819910-3820081:1:exon
so has part: feature:3821041-3821207:1:exon
so has part: feature:3826504-3826695:1:exon
so has part: feature:3827047-3827228:1:exon

XP_029388226.1
type: Protein
SIO_000068: ncbiprotein

position:3827228:1
position: 3827228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3657556-3657598:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3693316-3694353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3702970-3703142:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3708593-3709073:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3725179-3725412:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3754543-3754782:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3756798-3756855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3775410-3775513:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3816841-3816978:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3819910-3820081:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3821041-3821207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3826504-3826695:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3827047-3827228:1:exon

C20H4orf51
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: C20H4orf51
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3851636..3889850)
location: region:3851636-3889850:-1
so has part: feature:3851636-3889850:-1:exon
subclass of: SO_0000010

110337183
type: Gene
SIO_000068: ncbigene

position:3851636:-1
position: 3851636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3889850:-1
position: 3889850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3851636-3889850:-1:exon

C20H4orf51
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: C20H4orf51
product: chromosome 20 C4orf51 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021219947.1
SIO_010081: C20H4orf51
subclass of: SO_0000673
so part of: C20H4orf51
location: complement(join(3851636..3851743,3854750..3854823,3855687..3855759,3861171..3861232,3870726..3870802,3889618..3889850))
location: region:3851636-3889850:-1
so has part: feature:3889618-3889850:-1:exon
so has part: feature:3870726-3870802:-1:exon
so has part: feature:3861171-3861232:-1:exon
so has part: feature:3855687-3855759:-1:exon
so has part: feature:3854750-3854823:-1:exon
so has part: feature:3851636-3851743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3889618-3889850:-1:exon

position:3889618:-1
position: 3889618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3870726-3870802:-1:exon

position:3870726:-1
position: 3870726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3870802:-1
position: 3870802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3861171-3861232:-1:exon

position:3861171:-1
position: 3861171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3861232:-1
position: 3861232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3855687-3855759:-1:exon

position:3855687:-1
position: 3855687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3855759:-1
position: 3855759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3854750-3854823:-1:exon

position:3854750:-1
position: 3854750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3854823:-1
position: 3854823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3851636-3851743:-1:exon

position:3851743:-1
position: 3851743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C20H4orf51
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: C20H4orf51
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C4orf51 homolog
translation: MTHFLYLTPEILLPFSPLTSTEFELIRRKAQQLWQDETRWSASSMTTYSGSYREKQLDEATCNRLAQRVGQPQFEYKSTPLPGSSAYNTLPGHAGSQEAADGKGRLPGITSPSRDSPLNVKHKVAHQIWGSQVPCPAFLAYRGLRRSPCIQPKKPGFDLLVSYRNRGKALLKRLQRQWDYENKLGSSEDSETDRFSSNTSGSSGRKFK
SIO_010081: C20H4orf51
subclass of: SO_0000673
so part of: C20H4orf51
location: complement(join(3851636..3851743,3854750..3854823,3855687..3855759,3861171..3861232,3870726..3870802,3889618..3889850))
location: region:3851636-3889850:-1
so has part: feature:3889618-3889850:-1:exon
so has part: feature:3870726-3870802:-1:exon
so has part: feature:3861171-3861232:-1:exon
so has part: feature:3855687-3855759:-1:exon
so has part: feature:3854750-3854823:-1:exon
so has part: feature:3851636-3851743:-1:exon

XP_021075606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3889618-3889850:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3870726-3870802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3861171-3861232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3855687-3855759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3854750-3854823:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3851636-3851743:-1:exon

Mmaa
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3912131..3940567)
location: region:3912131-3940567:-1
so has part: feature:3912131-3940567:-1:exon
subclass of: SO_0000010

110337583
type: Gene
SIO_000068: ncbigene

position:3912131:-1
position: 3912131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3940567:-1
position: 3940567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3912131-3940567:-1:exon

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029532530.1
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912131..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927222,3940516..3940567))
location: region:3912131-3940567:-1
so has part: feature:3940516-3940567:-1:exon
so has part: feature:3926744-3927222:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912131-3912659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3940516-3940567:-1:exon

position:3940516:-1
position: 3940516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3926744-3927222:-1:exon

position:3926744:-1
position: 3926744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3927222:-1
position: 3927222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3923587-3923709:-1:exon

position:3923587:-1
position: 3923587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3923709:-1
position: 3923709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3919652-3919759:-1:exon

position:3919652:-1
position: 3919652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3919759:-1
position: 3919759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3918875-3919045:-1:exon

position:3918875:-1
position: 3918875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3919045:-1
position: 3919045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3915527-3915612:-1:exon

position:3915527:-1
position: 3915527
reference: sequence
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position:3915612:-1
position: 3915612
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:3913740-3913889:-1:exon

position:3913740:-1
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reference: sequence
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position:3913889:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:3912131-3912659:-1:exon

position:3912659:-1
position: 3912659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532524.1
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912131..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927222,3928159..3928298,3940516..3940529))
location: region:3912131-3940529:-1
so has part: feature:3940516-3940529:-1:exon
so has part: feature:3928159-3928298:-1:exon
so has part: feature:3926744-3927222:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912131-3912659:-1:exon

position:3940529:-1
position: 3940529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3940516-3940529:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3928159-3928298:-1:exon

position:3928159:-1
position: 3928159
reference: sequence
type: ReverseStrandPosition
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position:3928298:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:3926744-3927222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912131-3912659:-1:exon

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029532529.1
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912131..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927222,3930995..3931136,3940469..3940509))
location: region:3912131-3940509:-1
so has part: feature:3940469-3940509:-1:exon
so has part: feature:3930995-3931136:-1:exon
so has part: feature:3926744-3927222:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912131-3912659:-1:exon

position:3940509:-1
position: 3940509
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:3940469-3940509:-1:exon

position:3940469:-1
position: 3940469
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:3930995-3931136:-1:exon

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position: 3930995
reference: sequence
type: ReverseStrandPosition
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position:3931136:-1
position: 3931136
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:3926744-3927222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912131-3912659:-1:exon

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029532526.1
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912131..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927222,3928230..3928298,3930995..3931136,3940469..3940509))
location: region:3912131-3940509:-1
so has part: feature:3940469-3940509:-1:exon
so has part: feature:3930995-3931136:-1:exon
so has part: feature:3928230-3928298:-1:exon
so has part: feature:3926744-3927222:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912131-3912659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3940469-3940509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3930995-3931136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3928230-3928298:-1:exon

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position: 3928230
reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:3926744-3927222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3912131-3912659:-1:exon

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029532519.1
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912131..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927222,3928159..3928298,3930995..3931136,3940469..3940509))
location: region:3912131-3940509:-1
so has part: feature:3940469-3940509:-1:exon
so has part: feature:3930995-3931136:-1:exon
so has part: feature:3928159-3928298:-1:exon
so has part: feature:3926744-3927222:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912131-3912659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3940469-3940509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3930995-3931136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3928159-3928298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3926744-3927222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3912131-3912659:-1:exon

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532528.1
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912131..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927222,3928666..3928775,3930995..3931136,3940469..3940509))
location: region:3912131-3940509:-1
so has part: feature:3940469-3940509:-1:exon
so has part: feature:3930995-3931136:-1:exon
so has part: feature:3928666-3928775:-1:exon
so has part: feature:3926744-3927222:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912131-3912659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3940469-3940509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3930995-3931136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3928666-3928775:-1:exon

position:3928666:-1
position: 3928666
reference: sequence
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position:3928775:-1
position: 3928775
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:3926744-3927222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3912131-3912659:-1:exon

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029532522.1
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912131..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927222,3928159..3928298,3928666..3928775,3930995..3931136,3940469..3940509))
location: region:3912131-3940509:-1
so has part: feature:3940469-3940509:-1:exon
so has part: feature:3930995-3931136:-1:exon
so has part: feature:3928666-3928775:-1:exon
so has part: feature:3928159-3928298:-1:exon
so has part: feature:3926744-3927222:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912131-3912659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3940469-3940509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3930995-3931136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3928666-3928775:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3928159-3928298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3926744-3927222:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3912131-3912659:-1:exon

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029532523.1
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912131..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927222,3928159..3928298,3940469..3940493))
location: region:3912131-3940493:-1
so has part: feature:3940469-3940493:-1:exon
so has part: feature:3928159-3928298:-1:exon
so has part: feature:3926744-3927222:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912131-3912659:-1:exon

position:3940493:-1
position: 3940493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3940469-3940493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3928159-3928298:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3926744-3927222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912131-3912659:-1:exon

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029532527.1
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912131..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927222,3928230..3928298,3940469..3940486))
location: region:3912131-3940486:-1
so has part: feature:3940469-3940486:-1:exon
so has part: feature:3928230-3928298:-1:exon
so has part: feature:3926744-3927222:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912131-3912659:-1:exon

position:3940486:-1
position: 3940486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3940469-3940486:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3928230-3928298:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3926744-3927222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912131-3912659:-1:exon

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532521.1
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912131..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927222,3928159..3928298,3930995..3931136,3939276..3940305))
location: region:3912131-3940305:-1
so has part: feature:3939276-3940305:-1:exon
so has part: feature:3930995-3931136:-1:exon
so has part: feature:3928159-3928298:-1:exon
so has part: feature:3926744-3927222:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912131-3912659:-1:exon

position:3940305:-1
position: 3940305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3939276-3940305:-1:exon

position:3939276:-1
position: 3939276
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:3930995-3931136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3928159-3928298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3926744-3927222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3912131-3912659:-1:exon

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029532520.1
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912131..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927222,3928159..3928298,3930995..3932740))
location: region:3912131-3932740:-1
so has part: feature:3930995-3932740:-1:exon
so has part: feature:3928159-3928298:-1:exon
so has part: feature:3926744-3927222:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912131-3912659:-1:exon

position:3932740:-1
position: 3932740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3930995-3932740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3928159-3928298:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3926744-3927222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912131-3912659:-1:exon

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021220580.2
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912351..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3923587..3923709,3926744..3927222,3940516..3940567))
location: region:3912351-3940567:-1
so has part: feature:3940516-3940567:-1:exon
so has part: feature:3926744-3927222:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912351-3912659:-1:exon

position:3912351:-1
position: 3912351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3940516-3940567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3926744-3927222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3912351-3912659:-1:exon

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029532531.1
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912351..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3923587..3923709,3926744..3927222,3928159..3928298,3930995..3931136,3940469..3940509))
location: region:3912351-3940509:-1
so has part: feature:3940469-3940509:-1:exon
so has part: feature:3930995-3931136:-1:exon
so has part: feature:3928159-3928298:-1:exon
so has part: feature:3926744-3927222:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912351-3912659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3940469-3940509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3930995-3931136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3928159-3928298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3926744-3927222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912351-3912659:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X2
translation: MTISTLLLSPYWHLLTRLSRMPSPRLLHSSHPAPGPPGALPNCFGHHCAKRVLLFDGFRRTLCVQATLKDHTEGLSDKEQRFVDRLYTGLVQGQRACLAEAITLVESTHTRKKELAQVLLQRVLAHQREQELRNQGKPFTFRVGLSGPPGAGKSTFIECFGKMLTEQGHRLSVLAVDPSSCTSGGSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRRRSEVWRPKVIRISARSGEGITEMWDTMREFQHQMLASGELAAKRQTQHKVWMWNLIQENVLEHFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912372..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3923587..3923709,3926744..3927173))
location: region:3912372-3927173:-1
so has part: feature:3926744-3927173:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912372-3912659:-1:exon

XP_021076239.1
type: Protein
SIO_000068: ncbiprotein

position:3912372:-1
position: 3912372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3927173:-1
position: 3927173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3926744-3927173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3912372-3912659:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X2
translation: MTISTLLLSPYWHLLTRLSRMPSPRLLHSSHPAPGPPGALPNCFGHHCAKRVLLFDGFRRTLCVQATLKDHTEGLSDKEQRFVDRLYTGLVQGQRACLAEAITLVESTHTRKKELAQVLLQRVLAHQREQELRNQGKPFTFRVGLSGPPGAGKSTFIECFGKMLTEQGHRLSVLAVDPSSCTSGGSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRRRSEVWRPKVIRISARSGEGITEMWDTMREFQHQMLASGELAAKRQTQHKVWMWNLIQENVLEHFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912372..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3923587..3923709,3926744..3927173))
location: region:3912372-3927173:-1
so has part: feature:3926744-3927173:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912372-3912659:-1:exon

XP_029388391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926744-3927173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3912372-3912659:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X1
translation: MTISTLLLSPYWHLLTRLSRMPSPRLLHSSHPAPGPPGALPNCFGHHCAKRVLLFDGFRRTLCVQATLKDHTEGLSDKEQRFVDRLYTGLVQGQRACLAEAITLVESTHTRKKELAQVLLQRVLAHQREQELRNQGKPFTFRVGLSGPPGAGKSTFIECFGKMLTEQGHRLSVLAVDPSSCTSGGRQQIAEQLLCTVQIYSKGHVMRKFQKDSEGRDCSVWSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRRRSEVWRPKVIRISARSGEGITEMWDTMREFQHQMLASGELAAKRQTQHKVWMWNLIQENVLEHFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912372..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927173))
location: region:3912372-3927173:-1
so has part: feature:3926744-3927173:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912372-3912659:-1:exon

XP_029388379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926744-3927173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3912372-3912659:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X1
translation: MTISTLLLSPYWHLLTRLSRMPSPRLLHSSHPAPGPPGALPNCFGHHCAKRVLLFDGFRRTLCVQATLKDHTEGLSDKEQRFVDRLYTGLVQGQRACLAEAITLVESTHTRKKELAQVLLQRVLAHQREQELRNQGKPFTFRVGLSGPPGAGKSTFIECFGKMLTEQGHRLSVLAVDPSSCTSGGRQQIAEQLLCTVQIYSKGHVMRKFQKDSEGRDCSVWSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRRRSEVWRPKVIRISARSGEGITEMWDTMREFQHQMLASGELAAKRQTQHKVWMWNLIQENVLEHFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912372..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927173))
location: region:3912372-3927173:-1
so has part: feature:3926744-3927173:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912372-3912659:-1:exon

XP_029388380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926744-3927173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3912372-3912659:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X1
translation: MTISTLLLSPYWHLLTRLSRMPSPRLLHSSHPAPGPPGALPNCFGHHCAKRVLLFDGFRRTLCVQATLKDHTEGLSDKEQRFVDRLYTGLVQGQRACLAEAITLVESTHTRKKELAQVLLQRVLAHQREQELRNQGKPFTFRVGLSGPPGAGKSTFIECFGKMLTEQGHRLSVLAVDPSSCTSGGRQQIAEQLLCTVQIYSKGHVMRKFQKDSEGRDCSVWSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRRRSEVWRPKVIRISARSGEGITEMWDTMREFQHQMLASGELAAKRQTQHKVWMWNLIQENVLEHFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912372..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927173))
location: region:3912372-3927173:-1
so has part: feature:3926744-3927173:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912372-3912659:-1:exon

XP_029388381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926744-3927173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3912372-3912659:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X1
translation: MTISTLLLSPYWHLLTRLSRMPSPRLLHSSHPAPGPPGALPNCFGHHCAKRVLLFDGFRRTLCVQATLKDHTEGLSDKEQRFVDRLYTGLVQGQRACLAEAITLVESTHTRKKELAQVLLQRVLAHQREQELRNQGKPFTFRVGLSGPPGAGKSTFIECFGKMLTEQGHRLSVLAVDPSSCTSGGRQQIAEQLLCTVQIYSKGHVMRKFQKDSEGRDCSVWSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRRRSEVWRPKVIRISARSGEGITEMWDTMREFQHQMLASGELAAKRQTQHKVWMWNLIQENVLEHFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912372..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927173))
location: region:3912372-3927173:-1
so has part: feature:3926744-3927173:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912372-3912659:-1:exon

XP_029388382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926744-3927173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3912372-3912659:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X1
translation: MTISTLLLSPYWHLLTRLSRMPSPRLLHSSHPAPGPPGALPNCFGHHCAKRVLLFDGFRRTLCVQATLKDHTEGLSDKEQRFVDRLYTGLVQGQRACLAEAITLVESTHTRKKELAQVLLQRVLAHQREQELRNQGKPFTFRVGLSGPPGAGKSTFIECFGKMLTEQGHRLSVLAVDPSSCTSGGRQQIAEQLLCTVQIYSKGHVMRKFQKDSEGRDCSVWSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRRRSEVWRPKVIRISARSGEGITEMWDTMREFQHQMLASGELAAKRQTQHKVWMWNLIQENVLEHFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912372..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927173))
location: region:3912372-3927173:-1
so has part: feature:3926744-3927173:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912372-3912659:-1:exon

XP_029388383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926744-3927173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3912372-3912659:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X1
translation: MTISTLLLSPYWHLLTRLSRMPSPRLLHSSHPAPGPPGALPNCFGHHCAKRVLLFDGFRRTLCVQATLKDHTEGLSDKEQRFVDRLYTGLVQGQRACLAEAITLVESTHTRKKELAQVLLQRVLAHQREQELRNQGKPFTFRVGLSGPPGAGKSTFIECFGKMLTEQGHRLSVLAVDPSSCTSGGRQQIAEQLLCTVQIYSKGHVMRKFQKDSEGRDCSVWSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRRRSEVWRPKVIRISARSGEGITEMWDTMREFQHQMLASGELAAKRQTQHKVWMWNLIQENVLEHFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912372..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927173))
location: region:3912372-3927173:-1
so has part: feature:3926744-3927173:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912372-3912659:-1:exon

XP_029388384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926744-3927173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3912372-3912659:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X1
translation: MTISTLLLSPYWHLLTRLSRMPSPRLLHSSHPAPGPPGALPNCFGHHCAKRVLLFDGFRRTLCVQATLKDHTEGLSDKEQRFVDRLYTGLVQGQRACLAEAITLVESTHTRKKELAQVLLQRVLAHQREQELRNQGKPFTFRVGLSGPPGAGKSTFIECFGKMLTEQGHRLSVLAVDPSSCTSGGRQQIAEQLLCTVQIYSKGHVMRKFQKDSEGRDCSVWSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRRRSEVWRPKVIRISARSGEGITEMWDTMREFQHQMLASGELAAKRQTQHKVWMWNLIQENVLEHFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912372..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927173))
location: region:3912372-3927173:-1
so has part: feature:3926744-3927173:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912372-3912659:-1:exon

XP_029388386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926744-3927173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3912372-3912659:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X1
translation: MTISTLLLSPYWHLLTRLSRMPSPRLLHSSHPAPGPPGALPNCFGHHCAKRVLLFDGFRRTLCVQATLKDHTEGLSDKEQRFVDRLYTGLVQGQRACLAEAITLVESTHTRKKELAQVLLQRVLAHQREQELRNQGKPFTFRVGLSGPPGAGKSTFIECFGKMLTEQGHRLSVLAVDPSSCTSGGRQQIAEQLLCTVQIYSKGHVMRKFQKDSEGRDCSVWSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRRRSEVWRPKVIRISARSGEGITEMWDTMREFQHQMLASGELAAKRQTQHKVWMWNLIQENVLEHFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912372..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927173))
location: region:3912372-3927173:-1
so has part: feature:3926744-3927173:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912372-3912659:-1:exon

XP_029388387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926744-3927173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3912372-3912659:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X1
translation: MTISTLLLSPYWHLLTRLSRMPSPRLLHSSHPAPGPPGALPNCFGHHCAKRVLLFDGFRRTLCVQATLKDHTEGLSDKEQRFVDRLYTGLVQGQRACLAEAITLVESTHTRKKELAQVLLQRVLAHQREQELRNQGKPFTFRVGLSGPPGAGKSTFIECFGKMLTEQGHRLSVLAVDPSSCTSGGRQQIAEQLLCTVQIYSKGHVMRKFQKDSEGRDCSVWSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRRRSEVWRPKVIRISARSGEGITEMWDTMREFQHQMLASGELAAKRQTQHKVWMWNLIQENVLEHFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912372..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927173))
location: region:3912372-3927173:-1
so has part: feature:3926744-3927173:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912372-3912659:-1:exon

XP_029388388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926744-3927173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3912372-3912659:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X1
translation: MTISTLLLSPYWHLLTRLSRMPSPRLLHSSHPAPGPPGALPNCFGHHCAKRVLLFDGFRRTLCVQATLKDHTEGLSDKEQRFVDRLYTGLVQGQRACLAEAITLVESTHTRKKELAQVLLQRVLAHQREQELRNQGKPFTFRVGLSGPPGAGKSTFIECFGKMLTEQGHRLSVLAVDPSSCTSGGRQQIAEQLLCTVQIYSKGHVMRKFQKDSEGRDCSVWSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRRRSEVWRPKVIRISARSGEGITEMWDTMREFQHQMLASGELAAKRQTQHKVWMWNLIQENVLEHFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912372..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927173))
location: region:3912372-3927173:-1
so has part: feature:3926744-3927173:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912372-3912659:-1:exon

XP_029388389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926744-3927173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3912372-3912659:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X1
translation: MTISTLLLSPYWHLLTRLSRMPSPRLLHSSHPAPGPPGALPNCFGHHCAKRVLLFDGFRRTLCVQATLKDHTEGLSDKEQRFVDRLYTGLVQGQRACLAEAITLVESTHTRKKELAQVLLQRVLAHQREQELRNQGKPFTFRVGLSGPPGAGKSTFIECFGKMLTEQGHRLSVLAVDPSSCTSGGRQQIAEQLLCTVQIYSKGHVMRKFQKDSEGRDCSVWSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRRRSEVWRPKVIRISARSGEGITEMWDTMREFQHQMLASGELAAKRQTQHKVWMWNLIQENVLEHFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(3912372..3912659,3913740..3913889,3915527..3915612,3918875..3919045,3919652..3919759,3923587..3923709,3926744..3927173))
location: region:3912372-3927173:-1
so has part: feature:3926744-3927173:-1:exon
so has part: feature:3923587-3923709:-1:exon
so has part: feature:3919652-3919759:-1:exon
so has part: feature:3918875-3919045:-1:exon
so has part: feature:3915527-3915612:-1:exon
so has part: feature:3913740-3913889:-1:exon
so has part: feature:3912372-3912659:-1:exon

XP_029388390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926744-3927173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3923587-3923709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3919652-3919759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3918875-3919045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3915527-3915612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3913740-3913889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3912372-3912659:-1:exon

LOC115062744
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062744
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3925763..3925903
location: region:3925763-3925903:1
so has part: feature:3925763-3925903:1:exon
subclass of: SO_0000578

115062744
type: Gene
SIO_000068: ncbigene

position:3925763:1
position: 3925763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3925903:1
position: 3925903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3925763-3925903:1:exon

LOC115062744
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snoRNA
gene: LOC115062744
product: small nucleolar RNA SNORA48
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00554
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842673.1
SIO_010081: LOC115062744
subclass of: SO_0000673
so part of: LOC115062744
location: 3925763..3925903
location: region:3925763-3925903:1
so has part: feature:3925763-3925903:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3925763-3925903:1:exon

Smad1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Smad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3981007..4041943)
location: region:3981007-4041943:-1
so has part: feature:3981007-4041943:-1:exon
subclass of: SO_0000010

110337251
type: Gene
SIO_000068: ncbigene

position:3981007:-1
position: 3981007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4041943:-1
position: 4041943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3981007-4041943:-1:exon

Smad1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Smad1
product: SMAD family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 34 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021220050.1
SIO_010081: Smad1
subclass of: SO_0000673
so part of: Smad1
location: complement(join(3981007..3982406,3986212..3986468,3992259..3992480,3995923..3996039,3998705..3998962,4014290..4014869,4041698..4041943))
location: region:3981007-4041943:-1
so has part: feature:4041698-4041943:-1:exon
so has part: feature:4014290-4014869:-1:exon
so has part: feature:3998705-3998962:-1:exon
so has part: feature:3995923-3996039:-1:exon
so has part: feature:3992259-3992480:-1:exon
so has part: feature:3986212-3986468:-1:exon
so has part: feature:3981007-3982406:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4041698-4041943:-1:exon

position:4041698:-1
position: 4041698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4014290-4014869:-1:exon

position:4014290:-1
position: 4014290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4014869:-1
position: 4014869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3998705-3998962:-1:exon

position:3998705:-1
position: 3998705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3998962:-1
position: 3998962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3995923-3996039:-1:exon

position:3995923:-1
position: 3995923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3996039:-1
position: 3996039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3992259-3992480:-1:exon

position:3992259:-1
position: 3992259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3992480:-1
position: 3992480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3986212-3986468:-1:exon

position:3986212:-1
position: 3986212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3986468:-1
position: 3986468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3981007-3982406:-1:exon

position:3982406:-1
position: 3982406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Smad1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Smad1
product: SMAD family member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532424.1
SIO_010081: Smad1
subclass of: SO_0000673
so part of: Smad1
location: complement(join(3982013..3982406,3986212..3986468,3992259..3992480,3995923..3996039,3998705..3998962,4014290..4014869,4027846..4028234))
location: region:3982013-4028234:-1
so has part: feature:4027846-4028234:-1:exon
so has part: feature:4014290-4014869:-1:exon
so has part: feature:3998705-3998962:-1:exon
so has part: feature:3995923-3996039:-1:exon
so has part: feature:3992259-3992480:-1:exon
so has part: feature:3986212-3986468:-1:exon
so has part: feature:3982013-3982406:-1:exon

position:3982013:-1
position: 3982013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4028234:-1
position: 4028234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4027846-4028234:-1:exon

position:4027846:-1
position: 4027846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4014290-4014869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3998705-3998962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3995923-3996039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3992259-3992480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3986212-3986468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3982013-3982406:-1:exon

Smad1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Smad1
product: SMAD family member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532423.1
SIO_010081: Smad1
subclass of: SO_0000673
so part of: Smad1
location: complement(join(3982013..3982406,3986212..3986468,3992259..3992480,3995923..3996039,3998705..3998962,4014290..4014869,4019263..4019390,4027846..4028234))
location: region:3982013-4028234:-1
so has part: feature:4027846-4028234:-1:exon
so has part: feature:4019263-4019390:-1:exon
so has part: feature:4014290-4014869:-1:exon
so has part: feature:3998705-3998962:-1:exon
so has part: feature:3995923-3996039:-1:exon
so has part: feature:3992259-3992480:-1:exon
so has part: feature:3986212-3986468:-1:exon
so has part: feature:3982013-3982406:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4027846-4028234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4019263-4019390:-1:exon

position:4019263:-1
position: 4019263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4019390:-1
position: 4019390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4014290-4014869:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3998705-3998962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3995923-3996039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3992259-3992480:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3986212-3986468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3982013-3982406:-1:exon

Smad1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Smad1
product: SMAD family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532422.1
SIO_010081: Smad1
subclass of: SO_0000673
so part of: Smad1
location: complement(join(3982013..3982406,3986212..3986468,3992259..3992480,3995923..3996039,3998705..3998962,4014290..4014869,4019263..4019467))
location: region:3982013-4019467:-1
so has part: feature:4019263-4019467:-1:exon
so has part: feature:4014290-4014869:-1:exon
so has part: feature:3998705-3998962:-1:exon
so has part: feature:3995923-3996039:-1:exon
so has part: feature:3992259-3992480:-1:exon
so has part: feature:3986212-3986468:-1:exon
so has part: feature:3982013-3982406:-1:exon

position:4019467:-1
position: 4019467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4019263-4019467:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4014290-4014869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3998705-3998962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3995923-3996039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3992259-3992480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3986212-3986468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3982013-3982406:-1:exon

Smad1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Smad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 1
translation: MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGGSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMAQDGSQPMDTNMMAPPLPAEISRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
SIO_010081: Smad1
subclass of: SO_0000673
so part of: Smad1
location: complement(join(3982263..3982406,3986212..3986468,3992259..3992480,3995923..3996039,3998705..3998962,4014290..4014689))
location: region:3982263-4014689:-1
so has part: feature:4014290-4014689:-1:exon
so has part: feature:3998705-3998962:-1:exon
so has part: feature:3995923-3996039:-1:exon
so has part: feature:3992259-3992480:-1:exon
so has part: feature:3986212-3986468:-1:exon
so has part: feature:3982263-3982406:-1:exon

XP_021075709.1
type: Protein
SIO_000068: ncbiprotein

position:3982263:-1
position: 3982263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4014689:-1
position: 4014689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4014290-4014689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3998705-3998962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3995923-3996039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3992259-3992480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3986212-3986468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3982263-3982406:-1:exon

Smad1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Smad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 1
translation: MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGGSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMAQDGSQPMDTNMMAPPLPAEISRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
SIO_010081: Smad1
subclass of: SO_0000673
so part of: Smad1
location: complement(join(3982263..3982406,3986212..3986468,3992259..3992480,3995923..3996039,3998705..3998962,4014290..4014689))
location: region:3982263-4014689:-1
so has part: feature:4014290-4014689:-1:exon
so has part: feature:3998705-3998962:-1:exon
so has part: feature:3995923-3996039:-1:exon
so has part: feature:3992259-3992480:-1:exon
so has part: feature:3986212-3986468:-1:exon
so has part: feature:3982263-3982406:-1:exon

XP_029388282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4014290-4014689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3998705-3998962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3995923-3996039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3992259-3992480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3986212-3986468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3982263-3982406:-1:exon

Smad1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Smad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 1
translation: MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGGSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMAQDGSQPMDTNMMAPPLPAEISRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
SIO_010081: Smad1
subclass of: SO_0000673
so part of: Smad1
location: complement(join(3982263..3982406,3986212..3986468,3992259..3992480,3995923..3996039,3998705..3998962,4014290..4014689))
location: region:3982263-4014689:-1
so has part: feature:4014290-4014689:-1:exon
so has part: feature:3998705-3998962:-1:exon
so has part: feature:3995923-3996039:-1:exon
so has part: feature:3992259-3992480:-1:exon
so has part: feature:3986212-3986468:-1:exon
so has part: feature:3982263-3982406:-1:exon

XP_029388283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4014290-4014689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3998705-3998962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3995923-3996039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3992259-3992480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3986212-3986468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3982263-3982406:-1:exon

Smad1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Smad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 1
translation: MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGGSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMAQDGSQPMDTNMMAPPLPAEISRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
SIO_010081: Smad1
subclass of: SO_0000673
so part of: Smad1
location: complement(join(3982263..3982406,3986212..3986468,3992259..3992480,3995923..3996039,3998705..3998962,4014290..4014689))
location: region:3982263-4014689:-1
so has part: feature:4014290-4014689:-1:exon
so has part: feature:3998705-3998962:-1:exon
so has part: feature:3995923-3996039:-1:exon
so has part: feature:3992259-3992480:-1:exon
so has part: feature:3986212-3986468:-1:exon
so has part: feature:3982263-3982406:-1:exon

XP_029388284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4014290-4014689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3998705-3998962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3995923-3996039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3992259-3992480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3986212-3986468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3982263-3982406:-1:exon

LOC110337768
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4041311..4042000
location: region:4041311-4042000:1
so has part: feature:4041311-4042000:1:exon
subclass of: SO_0000010

110337768
type: Gene
SIO_000068: ncbigene

position:4041311:1
position: 4041311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4042000:1
position: 4042000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4041311-4042000:1:exon

LOC110337768
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: LOC110337768
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_021220815.1
SIO_010081: LOC110337768
subclass of: SO_0000673
so part of: LOC110337768
location: 4041311..4042000
location: region:4041311-4042000:1
so has part: feature:4041311-4042000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4041311-4042000:1:exon

LOC110337768
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: LOC110337768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MGLRPDAERGSPESWTRPTKTRGGREVWQQVRGREAPSWGGGDCVPELVPDSLQRGSPSPPGSSPEPVPDRPGSPPRIPSEPVPDPPRSLPGMPPEPAQDPPGAGPCPGAPRAAQDKSVPSRLGYARLYRLGGAPIGGDARDPAPGPALRSAPGRRPRALLSSRPPSPCLGPGLALVRPLAPRAWIDLVALASGSRNRPASTARLPIPGAQPARRLPSLTRAPRAPAAA
SIO_010081: LOC110337768
subclass of: SO_0000673
so part of: LOC110337768
location: 4041311..4042000
location: region:4041311-4042000:1
so has part: feature:4041311-4042000:1:exon

XP_021076474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4041311-4042000:1:exon

LOC115062742
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062742
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4140172..4140314
location: region:4140172-4140314:1
so has part: feature:4140172-4140314:1:exon
subclass of: SO_0000578

115062742
type: Gene
SIO_000068: ncbigene

position:4140172:1
position: 4140172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4140314:1
position: 4140314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4140172-4140314:1:exon

LOC115062742
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snoRNA
gene: LOC115062742
product: small nucleolar RNA SNORA48
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00554
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842671.1
SIO_010081: LOC115062742
subclass of: SO_0000673
so part of: LOC115062742
location: 4140172..4140314
location: region:4140172-4140314:1
so has part: feature:4140172-4140314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4140172-4140314:1:exon

LOC110337642
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4282085..4282926
location: region:4282085-4282926:1
so has part: feature:4282085-4282926:1:exon

110337642
type: Gene
SIO_000068: ncbigene

position:4282085:1
position: 4282085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4282926:1
position: 4282926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4282085-4282926:1:exon

LOC110337642
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110337642
subclass of: SO_0000673
so part of: LOC110337642
location: 4282085..4282926
location: region:4282085-4282926:1
so has part: feature:4282085-4282926:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4282085-4282926:1:exon

Otud4
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Otud4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4290808..4337080
location: region:4290808-4337080:1
so has part: feature:4290808-4337080:1:exon
subclass of: SO_0000010

110337769
type: Gene
SIO_000068: ncbigene

position:4290808:1
position: 4290808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4337080:1
position: 4337080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4290808-4337080:1:exon

Otud4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Otud4
product: OTU deubiquitinase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021220816.2
SIO_010081: Otud4
subclass of: SO_0000673
so part of: Otud4
location: join(4290808..4291123,4296215..4296298,4299212..4299262,4306050..4306096,4306695..4306767,4308466..4308547,4310336..4310372,4314572..4314629,4314840..4314957,4315054..4315118,4316843..4316937,4317788..4317888,4317985..4318174,4323611..4323773,4325632..4325755,4326534..4326589,4328379..4328453,4329212..4329350,4329847..4330101,4330994..4331034,4332098..4337080)
location: region:4290808-4337080:1
so has part: feature:4290808-4291123:1:exon
so has part: feature:4296215-4296298:1:exon
so has part: feature:4299212-4299262:1:exon
so has part: feature:4306050-4306096:1:exon
so has part: feature:4306695-4306767:1:exon
so has part: feature:4308466-4308547:1:exon
so has part: feature:4310336-4310372:1:exon
so has part: feature:4314572-4314629:1:exon
so has part: feature:4314840-4314957:1:exon
so has part: feature:4315054-4315118:1:exon
so has part: feature:4316843-4316937:1:exon
so has part: feature:4317788-4317888:1:exon
so has part: feature:4317985-4318174:1:exon
so has part: feature:4323611-4323773:1:exon
so has part: feature:4325632-4325755:1:exon
so has part: feature:4326534-4326589:1:exon
so has part: feature:4328379-4328453:1:exon
so has part: feature:4329212-4329350:1:exon
so has part: feature:4329847-4330101:1:exon
so has part: feature:4330994-4331034:1:exon
so has part: feature:4332098-4337080:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4290808-4291123:1:exon

position:4291123:1
position: 4291123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4296215-4296298:1:exon

position:4296215:1
position: 4296215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4296298:1
position: 4296298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4299212-4299262:1:exon

position:4299212:1
position: 4299212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4299262:1
position: 4299262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4306050-4306096:1:exon

position:4306050:1
position: 4306050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4306096:1
position: 4306096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4306695-4306767:1:exon

position:4306695:1
position: 4306695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4306767:1
position: 4306767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4308466-4308547:1:exon

position:4308466:1
position: 4308466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4308547:1
position: 4308547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4310336-4310372:1:exon

position:4310336:1
position: 4310336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4310372:1
position: 4310372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4314572-4314629:1:exon

position:4314572:1
position: 4314572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4314629:1
position: 4314629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4314840-4314957:1:exon

position:4314840:1
position: 4314840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4314957:1
position: 4314957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4315054-4315118:1:exon

position:4315054:1
position: 4315054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4315118:1
position: 4315118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4316843-4316937:1:exon

position:4316843:1
position: 4316843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4316937:1
position: 4316937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4317788-4317888:1:exon

position:4317788:1
position: 4317788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4317888:1
position: 4317888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4317985-4318174:1:exon

position:4317985:1
position: 4317985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4318174:1
position: 4318174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4323611-4323773:1:exon

position:4323611:1
position: 4323611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4323773:1
position: 4323773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4325632-4325755:1:exon

position:4325632:1
position: 4325632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4325755:1
position: 4325755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4326534-4326589:1:exon

position:4326534:1
position: 4326534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4326589:1
position: 4326589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4328379-4328453:1:exon

position:4328379:1
position: 4328379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4328453:1
position: 4328453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4329212-4329350:1:exon

position:4329212:1
position: 4329212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4329350:1
position: 4329350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4329847-4330101:1:exon

position:4329847:1
position: 4329847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4330101:1
position: 4330101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4330994-4331034:1:exon

position:4330994:1
position: 4330994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4331034:1
position: 4331034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4332098-4337080:1:exon

position:4332098:1
position: 4332098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Otud4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Otud4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 4
translation: MEAAVGALDGVDQGGVGPLEDATPMDAYLRRLGLYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIRYLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFVIYQEPNVSPSHVTENNFPEKVLLCFSNGNHYDIVYPITYKDSSAMCQSHFVKVKHEIGLWSKSTAATTDVNGFKPSGSENPKNNGNSADLPLSRKVLKSLNPAVYRNVEYEIWLKSKQAQQKRDYSIAAGLQYEVGDKCHVRLDHNGKLSNADIHGVHSENGLVLSEELGKKHTPKNLKPPPPESWNTVSGKKMKRPNSGQNFHSDTDYRGPKNLNKPIKAPSALPPRLQHPSSGVRQHAFSSHSTGSQSQKSSSEHKNLSRMPSQITRKPDRERAEDFDHVSRESYYFGLSPEERREKQAIEESRLLYEIQNRDEQAFPALSSSSVSQSPSQNSNACVPRKSSHARDRKGSIRRADPEERKDKDSVRGHTHVDKKPEPSTLEISDDKCTRVSSPSKSKKECPSPVEQKPAEHIPLSNPAPLLVSPEVHLTPAVPSLPATVPAWPSEPTTFGPTGVPAQIPILSVTQTTGPDAAVSQAHLTPSPVPVSIQAVNQPLMPLPQTMSLYQDPLYPGFPCSEKGDRAIAPPYSLCQTGEDLPKDKNILRFFFNLGVKAYSCPMWAPHSYLYPLHQAYMAACRMYPKVPVPVYPQNTWFQEAPPAQSESDCPCTDAHYSLHPEASVNGQMPQAEMGPPAFASPLVIPPSQVSEGHGQLSYQPDLESENPGQLLHAEYEESLSGKNMYPQQSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFVENPVMRQNIVLPPDDKGELDLPLENLDLSKECDSVSAVDEFPDARVEGAHSLSEASVSSKHEGRVEQSSQTRKADIDLASGSSAVAGKAHPPTQILNREREAGSAEPEPKRTIQSLKEKPEKGKDPKTAAAVVSPGANSVDRLQRPKEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWSSSGRGGYQHVRGEETWKGQPNRNRDEGYQYHRHVRGRPYRGDRRRSGMGDGHRGQHT
SIO_010081: Otud4
subclass of: SO_0000673
so part of: Otud4
location: join(4290965..4291123,4296215..4296298,4299212..4299262,4306050..4306096,4306695..4306767,4308466..4308547,4310336..4310372,4314572..4314629,4314840..4314957,4315054..4315118,4316843..4316937,4317788..4317888,4317985..4318174,4323611..4323773,4325632..4325755,4326534..4326589,4328379..4328453,4329212..4329350,4329847..4330101,4330994..4331034,4332098..4333312)
location: region:4290965-4333312:1
so has part: feature:4290965-4291123:1:exon
so has part: feature:4296215-4296298:1:exon
so has part: feature:4299212-4299262:1:exon
so has part: feature:4306050-4306096:1:exon
so has part: feature:4306695-4306767:1:exon
so has part: feature:4308466-4308547:1:exon
so has part: feature:4310336-4310372:1:exon
so has part: feature:4314572-4314629:1:exon
so has part: feature:4314840-4314957:1:exon
so has part: feature:4315054-4315118:1:exon
so has part: feature:4316843-4316937:1:exon
so has part: feature:4317788-4317888:1:exon
so has part: feature:4317985-4318174:1:exon
so has part: feature:4323611-4323773:1:exon
so has part: feature:4325632-4325755:1:exon
so has part: feature:4326534-4326589:1:exon
so has part: feature:4328379-4328453:1:exon
so has part: feature:4329212-4329350:1:exon
so has part: feature:4329847-4330101:1:exon
so has part: feature:4330994-4331034:1:exon
so has part: feature:4332098-4333312:1:exon

XP_021076475.1
type: Protein
SIO_000068: ncbiprotein

position:4290965:1
position: 4290965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4333312:1
position: 4333312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4290965-4291123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4296215-4296298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4299212-4299262:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4306050-4306096:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4306695-4306767:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4308466-4308547:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4310336-4310372:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4314572-4314629:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4314840-4314957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4315054-4315118:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4316843-4316937:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4317788-4317888:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4317985-4318174:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4323611-4323773:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4325632-4325755:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4326534-4326589:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4328379-4328453:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4329212-4329350:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4329847-4330101:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4330994-4331034:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4332098-4333312:1:exon

Abce1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Abce1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4339909..4369442)
location: region:4339909-4369442:-1
so has part: feature:4339909-4369442:-1:exon
subclass of: SO_0000010

110337210
type: Gene
SIO_000068: ncbigene

position:4339909:-1
position: 4339909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4369442:-1
position: 4369442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4339909-4369442:-1:exon

Abce1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Abce1
product: ATP binding cassette subfamily E member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 12 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021219982.1
SIO_010081: Abce1
subclass of: SO_0000673
so part of: Abce1
location: complement(join(4339909..4341601,4342423..4342534,4343757..4343879,4343968..4344110,4344199..4344309,4345310..4345368,4345485..4345544,4346394..4346615,4349985..4350106,4355917..4356006,4357093..4357189,4357429..4357498,4357631..4357768,4358572..4358689,4359814..4359911,4364426..4364511,4365756..4365885,4369238..4369442))
location: region:4339909-4369442:-1
so has part: feature:4369238-4369442:-1:exon
so has part: feature:4365756-4365885:-1:exon
so has part: feature:4364426-4364511:-1:exon
so has part: feature:4359814-4359911:-1:exon
so has part: feature:4358572-4358689:-1:exon
so has part: feature:4357631-4357768:-1:exon
so has part: feature:4357429-4357498:-1:exon
so has part: feature:4357093-4357189:-1:exon
so has part: feature:4355917-4356006:-1:exon
so has part: feature:4349985-4350106:-1:exon
so has part: feature:4346394-4346615:-1:exon
so has part: feature:4345485-4345544:-1:exon
so has part: feature:4345310-4345368:-1:exon
so has part: feature:4344199-4344309:-1:exon
so has part: feature:4343968-4344110:-1:exon
so has part: feature:4343757-4343879:-1:exon
so has part: feature:4342423-4342534:-1:exon
so has part: feature:4339909-4341601:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4369238-4369442:-1:exon

position:4369238:-1
position: 4369238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4365756-4365885:-1:exon

position:4365756:-1
position: 4365756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4365885:-1
position: 4365885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4364426-4364511:-1:exon

position:4364426:-1
position: 4364426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4364511:-1
position: 4364511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4359814-4359911:-1:exon

position:4359814:-1
position: 4359814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4359911:-1
position: 4359911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4358572-4358689:-1:exon

position:4358572:-1
position: 4358572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4358689:-1
position: 4358689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4357631-4357768:-1:exon

position:4357631:-1
position: 4357631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4357768:-1
position: 4357768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4357429-4357498:-1:exon

position:4357429:-1
position: 4357429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4357498:-1
position: 4357498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4357093-4357189:-1:exon

position:4357093:-1
position: 4357093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4357189:-1
position: 4357189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4355917-4356006:-1:exon

position:4355917:-1
position: 4355917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4356006:-1
position: 4356006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4349985-4350106:-1:exon

position:4349985:-1
position: 4349985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4350106:-1
position: 4350106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4346394-4346615:-1:exon

position:4346394:-1
position: 4346394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4346615:-1
position: 4346615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4345485-4345544:-1:exon

position:4345485:-1
position: 4345485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4345544:-1
position: 4345544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4345310-4345368:-1:exon

position:4345310:-1
position: 4345310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4345368:-1
position: 4345368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4344199-4344309:-1:exon

position:4344199:-1
position: 4344199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4344309:-1
position: 4344309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4343968-4344110:-1:exon

position:4343968:-1
position: 4343968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4344110:-1
position: 4344110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4343757-4343879:-1:exon

position:4343757:-1
position: 4343757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4343879:-1
position: 4343879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4342423-4342534:-1:exon

position:4342423:-1
position: 4342423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4342534:-1
position: 4342534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4339909-4341601:-1:exon

position:4341601:-1
position: 4341601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Abce1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Abce1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family E member 1
translation: MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGICIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTALKILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAAKGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMFDEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVTMPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGEFELAIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKISPKSTGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPADVYLIDEPSAYLDSEQRLMAARVVKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGVPSKNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDD
SIO_010081: Abce1
subclass of: SO_0000673
so part of: Abce1
location: complement(join(4341554..4341601,4342423..4342534,4343757..4343879,4343968..4344110,4344199..4344309,4345310..4345368,4345485..4345544,4346394..4346615,4349985..4350106,4355917..4356006,4357093..4357189,4357429..4357498,4357631..4357768,4358572..4358689,4359814..4359911,4364426..4364511,4365756..4365858))
location: region:4341554-4365858:-1
so has part: feature:4365756-4365858:-1:exon
so has part: feature:4364426-4364511:-1:exon
so has part: feature:4359814-4359911:-1:exon
so has part: feature:4358572-4358689:-1:exon
so has part: feature:4357631-4357768:-1:exon
so has part: feature:4357429-4357498:-1:exon
so has part: feature:4357093-4357189:-1:exon
so has part: feature:4355917-4356006:-1:exon
so has part: feature:4349985-4350106:-1:exon
so has part: feature:4346394-4346615:-1:exon
so has part: feature:4345485-4345544:-1:exon
so has part: feature:4345310-4345368:-1:exon
so has part: feature:4344199-4344309:-1:exon
so has part: feature:4343968-4344110:-1:exon
so has part: feature:4343757-4343879:-1:exon
so has part: feature:4342423-4342534:-1:exon
so has part: feature:4341554-4341601:-1:exon

XP_021075641.1
type: Protein
SIO_000068: ncbiprotein

position:4341554:-1
position: 4341554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4365858:-1
position: 4365858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4365756-4365858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4364426-4364511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4359814-4359911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4358572-4358689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4357631-4357768:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4357429-4357498:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4357093-4357189:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4355917-4356006:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4349985-4350106:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4346394-4346615:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4345485-4345544:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4345310-4345368:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4344199-4344309:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4343968-4344110:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4343757-4343879:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4342423-4342534:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4341554-4341601:-1:exon

Anapc10
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Anapc10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4369464..4416772
location: region:4369464-4416772:1
so has part: feature:4369464-4416772:1:exon
subclass of: SO_0000010

110337550
type: Gene
SIO_000068: ncbigene

position:4369464:1
position: 4369464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4416772:1
position: 4416772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4369464-4416772:1:exon

Anapc10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Anapc10
product: anaphase promoting complex subunit 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029532693.1
SIO_010081: Anapc10
subclass of: SO_0000673
so part of: Anapc10
location: join(4369464..4369546,4370577..4370703,4377864..4377954,4383845..4383965,4416354..4416772)
location: region:4369464-4416772:1
so has part: feature:4369464-4369546:1:exon
so has part: feature:4370577-4370703:1:exon
so has part: feature:4377864-4377954:1:exon
so has part: feature:4383845-4383965:1:exon
so has part: feature:4416354-4416772:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4369464-4369546:1:exon

position:4369546:1
position: 4369546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4370577-4370703:1:exon

position:4370577:1
position: 4370577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4370703:1
position: 4370703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4377864-4377954:1:exon

position:4377864:1
position: 4377864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4377954:1
position: 4377954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4383845-4383965:1:exon

position:4383845:1
position: 4383845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4383965:1
position: 4383965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4416354-4416772:1:exon

position:4416354:1
position: 4416354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Anapc10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Anapc10
product: anaphase promoting complex subunit 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029532692.1
SIO_010081: Anapc10
subclass of: SO_0000673
so part of: Anapc10
location: join(4369503..4369676,4370577..4370703,4377864..4377954,4383845..4383965,4416354..4416772)
location: region:4369503-4416772:1
so has part: feature:4369503-4369676:1:exon
so has part: feature:4370577-4370703:1:exon
so has part: feature:4377864-4377954:1:exon
so has part: feature:4383845-4383965:1:exon
so has part: feature:4416354-4416772:1:exon

position:4369503:1
position: 4369503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4369503-4369676:1:exon

position:4369676:1
position: 4369676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4370577-4370703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4377864-4377954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4383845-4383965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4416354-4416772:1:exon

Anapc10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Anapc10
product: anaphase promoting complex subunit 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532695.1
SIO_010081: Anapc10
subclass of: SO_0000673
so part of: Anapc10
location: join(4369535..4369602,4370577..4370703,4377864..4377954,4383845..4383965,4416354..4416772)
location: region:4369535-4416772:1
so has part: feature:4369535-4369602:1:exon
so has part: feature:4370577-4370703:1:exon
so has part: feature:4377864-4377954:1:exon
so has part: feature:4383845-4383965:1:exon
so has part: feature:4416354-4416772:1:exon

position:4369535:1
position: 4369535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4369535-4369602:1:exon

position:4369602:1
position: 4369602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4370577-4370703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4377864-4377954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4383845-4383965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4416354-4416772:1:exon

Anapc10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Anapc10
product: anaphase promoting complex subunit 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021220526.2
SIO_010081: Anapc10
subclass of: SO_0000673
so part of: Anapc10
location: join(4369623..4369676,4370529..4370703,4377864..4377954,4383845..4383965,4416354..4416772)
location: region:4369623-4416772:1
so has part: feature:4369623-4369676:1:exon
so has part: feature:4370529-4370703:1:exon
so has part: feature:4377864-4377954:1:exon
so has part: feature:4383845-4383965:1:exon
so has part: feature:4416354-4416772:1:exon

position:4369623:1
position: 4369623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4369623-4369676:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4370529-4370703:1:exon

position:4370529:1
position: 4370529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4377864-4377954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4383845-4383965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4416354-4416772:1:exon

Anapc10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Anapc10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anaphase-promoting complex subunit 10
translation: MTTPNKTPPGADPKQLERTATVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR
SIO_010081: Anapc10
subclass of: SO_0000673
so part of: Anapc10
location: join(4370589..4370703,4377864..4377954,4383845..4383965,4416354..4416584)
location: region:4370589-4416584:1
so has part: feature:4370589-4370703:1:exon
so has part: feature:4377864-4377954:1:exon
so has part: feature:4383845-4383965:1:exon
so has part: feature:4416354-4416584:1:exon

XP_021076185.1
type: Protein
SIO_000068: ncbiprotein

position:4370589:1
position: 4370589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4416584:1
position: 4416584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4370589-4370703:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4377864-4377954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4383845-4383965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4416354-4416584:1:exon

Anapc10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Anapc10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anaphase-promoting complex subunit 10
translation: MTTPNKTPPGADPKQLERTATVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR
SIO_010081: Anapc10
subclass of: SO_0000673
so part of: Anapc10
location: join(4370589..4370703,4377864..4377954,4383845..4383965,4416354..4416584)
location: region:4370589-4416584:1
so has part: feature:4370589-4370703:1:exon
so has part: feature:4377864-4377954:1:exon
so has part: feature:4383845-4383965:1:exon
so has part: feature:4416354-4416584:1:exon

XP_029388552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4370589-4370703:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4377864-4377954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4383845-4383965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4416354-4416584:1:exon

Anapc10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Anapc10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anaphase-promoting complex subunit 10
translation: MTTPNKTPPGADPKQLERTATVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR
SIO_010081: Anapc10
subclass of: SO_0000673
so part of: Anapc10
location: join(4370589..4370703,4377864..4377954,4383845..4383965,4416354..4416584)
location: region:4370589-4416584:1
so has part: feature:4370589-4370703:1:exon
so has part: feature:4377864-4377954:1:exon
so has part: feature:4383845-4383965:1:exon
so has part: feature:4416354-4416584:1:exon

XP_029388553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4370589-4370703:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4377864-4377954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4383845-4383965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4416354-4416584:1:exon

Anapc10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Anapc10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anaphase-promoting complex subunit 10
translation: MTTPNKTPPGADPKQLERTATVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR
SIO_010081: Anapc10
subclass of: SO_0000673
so part of: Anapc10
location: join(4370589..4370703,4377864..4377954,4383845..4383965,4416354..4416584)
location: region:4370589-4416584:1
so has part: feature:4370589-4370703:1:exon
so has part: feature:4377864-4377954:1:exon
so has part: feature:4383845-4383965:1:exon
so has part: feature:4416354-4416584:1:exon

XP_029388555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4370589-4370703:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4377864-4377954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4383845-4383965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4416354-4416584:1:exon

LOC110337551
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4414060..4414341)
location: region:4414060-4414341:-1
so has part: feature:4414060-4414341:-1:exon

110337551
type: Gene
SIO_000068: ncbigene

position:4414060:-1
position: 4414060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4414341:-1
position: 4414341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4414060-4414341:-1:exon

LOC110337551
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337551
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC110337551
subclass of: SO_0000673
so part of: LOC110337551
location: complement(4414060..4414341)
location: region:4414060-4414341:-1
so has part: feature:4414060-4414341:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4414060-4414341:-1:exon

Hhip
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Hhip
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4599958..4687521)
location: region:4599958-4687521:-1
so has part: feature:4599958-4687521:-1:exon
subclass of: SO_0000010

110337499
type: Gene
SIO_000068: ncbigene

position:4599958:-1
position: 4599958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4687521:-1
position: 4687521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4599958-4687521:-1:exon

Hhip
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Hhip
product: hedgehog interacting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021220457.1
SIO_010081: Hhip
subclass of: SO_0000673
so part of: Hhip
location: complement(join(4599958..4600600,4602868..4603016,4614491..4614572,4617084..4617214,4618065..4618188,4620211..4620332,4624348..4624491,4625088..4625261,4625810..4625961,4673602..4673803,4674651..4674807,4680925..4681117,4686752..4687521))
location: region:4599958-4687521:-1
so has part: feature:4686752-4687521:-1:exon
so has part: feature:4680925-4681117:-1:exon
so has part: feature:4674651-4674807:-1:exon
so has part: feature:4673602-4673803:-1:exon
so has part: feature:4625810-4625961:-1:exon
so has part: feature:4625088-4625261:-1:exon
so has part: feature:4624348-4624491:-1:exon
so has part: feature:4620211-4620332:-1:exon
so has part: feature:4618065-4618188:-1:exon
so has part: feature:4617084-4617214:-1:exon
so has part: feature:4614491-4614572:-1:exon
so has part: feature:4602868-4603016:-1:exon
so has part: feature:4599958-4600600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4686752-4687521:-1:exon

position:4686752:-1
position: 4686752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4680925-4681117:-1:exon

position:4680925:-1
position: 4680925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4681117:-1
position: 4681117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4674651-4674807:-1:exon

position:4674651:-1
position: 4674651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4674807:-1
position: 4674807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4673602-4673803:-1:exon

position:4673602:-1
position: 4673602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4673803:-1
position: 4673803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4625810-4625961:-1:exon

position:4625810:-1
position: 4625810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4625961:-1
position: 4625961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4625088-4625261:-1:exon

position:4625088:-1
position: 4625088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4625261:-1
position: 4625261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4624348-4624491:-1:exon

position:4624348:-1
position: 4624348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4624491:-1
position: 4624491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4620211-4620332:-1:exon

position:4620211:-1
position: 4620211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4620332:-1
position: 4620332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4618065-4618188:-1:exon

position:4618065:-1
position: 4618065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4618188:-1
position: 4618188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4617084-4617214:-1:exon

position:4617084:-1
position: 4617084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4617214:-1
position: 4617214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4614491-4614572:-1:exon

position:4614491:-1
position: 4614491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4614572:-1
position: 4614572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4602868-4603016:-1:exon

position:4602868:-1
position: 4602868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4603016:-1
position: 4603016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4599958-4600600:-1:exon

position:4600600:-1
position: 4600600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hhip
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Hhip
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hedgehog-interacting protein
translation: MLKMLSFKLLLLAVALGFFEGDAKFGERSEGSGARRRRCLNGNPPKRLKRRDRRVMSQLELLSGGEILCGGFYPRVSCCLQSDSPGLGRLENKIFSATNNSECSRLLEEIQCAPCSPHSQSLFYTPERDVLDGDLALPLLCKDYCKEFFYTCRGHIPGLLQTTADEFCFYYARKDAGLCFPDFPRKQVRGPASNYLGQMEDYEKVGGISRKHKHNCLCVQEVMSGLRQPVSAVHSGDGSHRLFILEKEGYVKILTPEGELFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDVRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARILQIIKGRDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDHNGNFLTLQQSPVTKQWQEKPLCLGASSSCRGYFSGHILGFGEDELGEVYILSSSKSVTQTHNGKLYKIVDPKRPLMPEECRVTVQPAQTLTSDCSRLCRNGYYTPTGKCCCSPGWEGDFCRLAKCEPACRHGGVCVRPNKCLCKKGYLGPQCEQVDRNVRRVTRAGILDQIIDMTSYLLDLTSYIV
SIO_010081: Hhip
subclass of: SO_0000673
so part of: Hhip
location: complement(join(4600407..4600600,4602868..4603016,4614491..4614572,4617084..4617214,4618065..4618188,4620211..4620332,4624348..4624491,4625088..4625261,4625810..4625961,4673602..4673803,4674651..4674807,4680925..4681117,4686752..4687030))
location: region:4600407-4687030:-1
so has part: feature:4686752-4687030:-1:exon
so has part: feature:4680925-4681117:-1:exon
so has part: feature:4674651-4674807:-1:exon
so has part: feature:4673602-4673803:-1:exon
so has part: feature:4625810-4625961:-1:exon
so has part: feature:4625088-4625261:-1:exon
so has part: feature:4624348-4624491:-1:exon
so has part: feature:4620211-4620332:-1:exon
so has part: feature:4618065-4618188:-1:exon
so has part: feature:4617084-4617214:-1:exon
so has part: feature:4614491-4614572:-1:exon
so has part: feature:4602868-4603016:-1:exon
so has part: feature:4600407-4600600:-1:exon

XP_021076116.1
type: Protein
SIO_000068: ncbiprotein

position:4600407:-1
position: 4600407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4687030:-1
position: 4687030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4686752-4687030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4680925-4681117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4674651-4674807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4673602-4673803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4625810-4625961:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4625088-4625261:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4624348-4624491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4620211-4620332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4618065-4618188:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4617084-4617214:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4614491-4614572:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4602868-4603016:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4600407-4600600:-1:exon

LOC110337732
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337732
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4960970..4961487
location: region:4960970-4961487:1
so has part: feature:4960970-4961487:1:exon

110337732
type: Gene
SIO_000068: ncbigene

position:4960970:1
position: 4960970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4961487:1
position: 4961487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4960970-4961487:1:exon

LOC110337732
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337732
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110337732
subclass of: SO_0000673
so part of: LOC110337732
location: 4960970..4961487
location: region:4960970-4961487:1
so has part: feature:4960970-4961487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4960970-4961487:1:exon

LOC110337770
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4985834..4987540)
location: region:4985834-4987540:-1
so has part: feature:4985834-4987540:-1:exon

110337770
type: Gene
SIO_000068: ncbigene

position:4985834:-1
position: 4985834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4987540:-1
position: 4987540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4985834-4987540:-1:exon

LOC110337770
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337770
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110337770
subclass of: SO_0000673
so part of: LOC110337770
location: complement(4985834..4985929)
location: region:4985834-4985929:-1
so has part: feature:4985834-4985929:-1:exon

position:4985929:-1
position: 4985929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4985834-4985929:-1:exon

LOC110337770
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337770
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110337770
subclass of: SO_0000673
so part of: LOC110337770
location: complement(4986692..4987540)
location: region:4986692-4987540:-1
so has part: feature:4986692-4987540:-1:exon

position:4986692:-1
position: 4986692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4986692-4987540:-1:exon

LOC110337771
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337771
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5122659..5124586)
location: region:5122659-5124586:-1
so has part: feature:5122659-5124586:-1:exon

110337771
type: Gene
SIO_000068: ncbigene

position:5122659:-1
position: 5122659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5124586:-1
position: 5124586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5122659-5124586:-1:exon

LOC110337771
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337771
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110337771
subclass of: SO_0000673
so part of: LOC110337771
location: complement(5122659..5123462)
location: region:5122659-5123462:-1
so has part: feature:5122659-5123462:-1:exon

position:5123462:-1
position: 5123462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5122659-5123462:-1:exon

LOC110337771
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337771
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110337771
subclass of: SO_0000673
so part of: LOC110337771
location: complement(5124582..5124586)
location: region:5124582-5124586:-1
so has part: feature:5124582-5124586:-1:exon

position:5124582:-1
position: 5124582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5124582-5124586:-1:exon

Gypa
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Gypa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5124806..5140254
location: region:5124806-5140254:1
so has part: feature:5124806-5140254:1:exon
subclass of: SO_0000010

110337184
type: Gene
SIO_000068: ncbigene

position:5124806:1
position: 5124806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5140254:1
position: 5140254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5124806-5140254:1:exon

Gypa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Gypa
product: glycophorin A (MNS blood group)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021219948.2
SIO_010081: Gypa
subclass of: SO_0000673
so part of: Gypa
location: join(5124806..5124843,5126771..5126851,5127201..5127284,5131419..5131499,5133677..5133715,5135084..5135169,5137346..5137414,5140148..5140254)
location: region:5124806-5140254:1
so has part: feature:5124806-5124843:1:exon
so has part: feature:5126771-5126851:1:exon
so has part: feature:5127201-5127284:1:exon
so has part: feature:5131419-5131499:1:exon
so has part: feature:5133677-5133715:1:exon
so has part: feature:5135084-5135169:1:exon
so has part: feature:5137346-5137414:1:exon
so has part: feature:5140148-5140254:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5124806-5124843:1:exon

position:5124843:1
position: 5124843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5126771-5126851:1:exon

position:5126771:1
position: 5126771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5126851:1
position: 5126851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5127201-5127284:1:exon

position:5127201:1
position: 5127201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5127284:1
position: 5127284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5131419-5131499:1:exon

position:5131419:1
position: 5131419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5131499:1
position: 5131499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5133677-5133715:1:exon

position:5133677:1
position: 5133677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5133715:1
position: 5133715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5135084-5135169:1:exon

position:5135084:1
position: 5135084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5135169:1
position: 5135169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5137346-5137414:1:exon

position:5137346:1
position: 5137346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5137414:1
position: 5137414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5140148-5140254:1:exon

position:5140148:1
position: 5140148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gypa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Gypa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycophorin-A
translation: MTESTTAVTTSGHFLTTTFHIPSSQHYQEEHSRSLPGSDPLLHVTTPVVALTVGNPNQHSAAMSTSDINFTSHPMAPTEVTAMPEHPVSPHGGGMMVPIRHNFPALVMILIILGVMAGIIGTILLISYFISRMTKKSSVDIQSPEGGDNGVPLSSIEQTPNQEFSNV
SIO_010081: Gypa
subclass of: SO_0000673
so part of: Gypa
location: join(5124810..5124843,5126771..5126851,5127201..5127284,5131419..5131499,5133677..5133715,5135084..5135169,5137346..5137414,5140148..5140177)
location: region:5124810-5140177:1
so has part: feature:5124810-5124843:1:exon
so has part: feature:5126771-5126851:1:exon
so has part: feature:5127201-5127284:1:exon
so has part: feature:5131419-5131499:1:exon
so has part: feature:5133677-5133715:1:exon
so has part: feature:5135084-5135169:1:exon
so has part: feature:5137346-5137414:1:exon
so has part: feature:5140148-5140177:1:exon

XP_021075607.1
type: Protein
SIO_000068: ncbiprotein

position:5124810:1
position: 5124810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5140177:1
position: 5140177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5124810-5124843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5126771-5126851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5127201-5127284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5131419-5131499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5133677-5133715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5135084-5135169:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5137346-5137414:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5140148-5140177:1:exon

Frem3
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Frem3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5247416..5320463
location: region:5247416-5320463:1
so has part: feature:5247416-5320463:1:exon
subclass of: SO_0000010

110337772
type: Gene
SIO_000068: ncbigene

position:5247416:1
position: 5247416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5320463:1
position: 5320463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5247416-5320463:1:exon

Frem3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Frem3
product: FRAS1 related extracellular matrix 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029532718.1
SIO_010081: Frem3
subclass of: SO_0000673
so part of: Frem3
location: join(5247416..5252578,5254636..5254728,5288346..5288492,5293562..5293792,5294026..5294151,5296308..5296645,5301767..5301868,5302947..5303009,5310595..5310655,5312062..5312223,5315945..5316094,5320040..5320463)
location: region:5247416-5320463:1
so has part: feature:5247416-5252578:1:exon
so has part: feature:5254636-5254728:1:exon
so has part: feature:5288346-5288492:1:exon
so has part: feature:5293562-5293792:1:exon
so has part: feature:5294026-5294151:1:exon
so has part: feature:5296308-5296645:1:exon
so has part: feature:5301767-5301868:1:exon
so has part: feature:5302947-5303009:1:exon
so has part: feature:5310595-5310655:1:exon
so has part: feature:5312062-5312223:1:exon
so has part: feature:5315945-5316094:1:exon
so has part: feature:5320040-5320463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5247416-5252578:1:exon

position:5252578:1
position: 5252578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5254636-5254728:1:exon

position:5254636:1
position: 5254636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5254728:1
position: 5254728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5288346-5288492:1:exon

position:5288346:1
position: 5288346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5288492:1
position: 5288492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5293562-5293792:1:exon

position:5293562:1
position: 5293562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5293792:1
position: 5293792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5294026-5294151:1:exon

position:5294026:1
position: 5294026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5294151:1
position: 5294151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5296308-5296645:1:exon

position:5296308:1
position: 5296308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5296645:1
position: 5296645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5301767-5301868:1:exon

position:5301767:1
position: 5301767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5301868:1
position: 5301868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5302947-5303009:1:exon

position:5302947:1
position: 5302947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5303009:1
position: 5303009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5310595-5310655:1:exon

position:5310595:1
position: 5310595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5310655:1
position: 5310655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5312062-5312223:1:exon

position:5312062:1
position: 5312062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5312223:1
position: 5312223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5315945-5316094:1:exon

position:5315945:1
position: 5315945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5316094:1
position: 5316094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5320040-5320463:1:exon

position:5320040:1
position: 5320040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Frem3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Frem3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 3 codons; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:5247548..5247550,aa:OTHER)
transl except: (pos:5294100..5294102,aa:OTHER)
product: LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 3
translation: MAGDSLNLPGMALQLLVTRTCLLLTCRALREQVPLSENVSHCELXLPPWGALDGGSHQNPGILIANPGFQVPQGRSVWLNPLRDLVIRVQRGGQCKVMVLNIPRLQGALSPHQFPCDFGAQQVKYTHFGSPSATRTRIQLQLRYDSGNATLVLPFTLQVNVVFPKLQWVTRNRPLKVFKVLGCSRAIDRRVLNFASRSSCRLTLLPHPGGPLPKYGRLVDAAGNPLSRGHWASCEAFIEAGVXYQHTTTPSSPSRDYVPMLVELLGPESQGTGSEEVLAQEYFQIQVRIQKRARSTAPRPSLSALMMVEVEQSLLTALTPDALAAEDRESDPDDLVFNILNIPEAPPGHHGGQGYVVTRDDPLGLPVSFFTQKELRELKIAYRPPSGSSEGDRIFQLKLQVVDEDGDTSEPFAFMVVVKSMNRLAPIASYRGGLAVFEGQARPLSDAQSFQVSDKDNSKEIRIAAVRGLQHGQLVVWGAPAGCKYFTLADLSAGRVVYQHDGSDSYSDNIILKMEDGHHQVEFLFPIAIVPVDDAAPVITANTGLSVTEGQLVQISPFVLCATDIDSEDSAILFVLEDQHLKGKEEETHEDLAPGSYSSSQHPGSMLLRQAETPSSLLHNDWHYVEEEGLYEKVVTEWLQRDIMEGRLFFSHPGPHSPSPVAHLAFHVQDDHDPPNLSNQHFFTITIQPADKLHPQLSPETTLEMTVQGYQLTPSQKKFLQCTDQNSDEQNLWYTLLTRPTDADSNCQVQAGEIVLTESPDRPIVHFTQAQANHQKIAYRFPQKNLGIVPRVVQFTYKVEDTAGNSVPGTFTLFLQPLNNQPPKVINRGFAVLEGDGFILGRGELNVLDPDTNVDQIFFILVWGPQHGHLQNFKKYMVPGESFMLADVINGNISYQNSRDETDSDFIYLEVSDGVHHIPITVQISVQPAVADRSPGISITGTPALATSLIVLENTASEITIDVTQGRKNTNDLMLSFIMEDKPKLGMILVNGWPAEQVTQEDLLGGAVSYVHTSGEIGFQRVYDAFSFILSKDAYHWTMRDNILERVLVEVTVLPVDNMAPKVLVGEPFIIYEGGKNLLTPQHVNIEDVDTSKDEILCTLTAQPSSGYLENLAPAPGSEVSRAGNPISAFFFKDVRVGYINYVQSIHKGVEPGADQFTFYCSDGINFSPKVLLPLTILPTNDEQPQLFTHEFVVLEGMSQVIDTSLVNGVDADFPSDRLHFRLTVLPQHGQMTQRLATGSKPIRSFTLQEIQEPSSIAYEHDDSESTADSFEVWLSDGRHTTHTKVPIVVILVDDEVPQLTINDGLEIETGHSEIITNHVLKAIDLDSDNKSLSFVLHSEPQQGLLQQLRKPGGDVRHNLTMGMNFTQDEIDRNIIRYSHTGQGKAGDLLKFDVTDGVNPLRDRYFYITIDNSNSVVPEIVSKRVTLTEGNRVTLTTELLDTSDIHSPGEQLLYRTTRAPSTGYLESSDQPGEPMASFTQLQLSRNKLSYDHISKDETKLDHFELRVTGGDHSVSRIFRIFVTEQDNEKPTLTIQALALQRGDSTVVTPSQLTVEDEGTPADFILFTITQVPVHGRILYNGSHPVATFTKKDLTKSPILYCHDGSETNKDSFSFTVTDGIHTGFHVFPDTALETHVPQTVWIQISPLGDRLPQIAINRCATAVKLLHTGHLGFLITNEYLQTTLQGAPHRLLTYKVTRGPEHGYIINTGLGNESTHMSTQADIDEMRVYYILNKSRGSATRDTFYFSVETSGGKWLRNQSFHLNWAWISLEKEHYVVDEDSPIFEVTLIHRGYLGGTSAISTGTKGDTAEENKDFKGKAPMLVQFSPGQSTATWKVGLIPDTKYETSETFQIILSESGSAALEFPEMATVEIVDPEDESTVYIPEAEYRLVEAVGEFLVPVRXSGDMSQELAVICSTRPVHNMASVSELACIYSALILHDDDEVTVTEDKSNALIKAAGVNIEPFWPGLFAKALANIGSLICNIGASGPAPAAGAAPAGG…
SIO_010081: Frem3
subclass of: SO_0000673
so part of: Frem3
location: join(5247416..5252578,5254636..5254728,5288346..5288492,5293562..5293792,5294026..5294151,5296308..5296645,5301767..5301868,5302947..5303009,5310595..5310655,5312062..5312223,5315945..5316094,5320040..5320269)
location: region:5247416-5320269:1
so has part: feature:5247416-5252578:1:exon
so has part: feature:5254636-5254728:1:exon
so has part: feature:5288346-5288492:1:exon
so has part: feature:5293562-5293792:1:exon
so has part: feature:5294026-5294151:1:exon
so has part: feature:5296308-5296645:1:exon
so has part: feature:5301767-5301868:1:exon
so has part: feature:5302947-5303009:1:exon
so has part: feature:5310595-5310655:1:exon
so has part: feature:5312062-5312223:1:exon
so has part: feature:5315945-5316094:1:exon
so has part: feature:5320040-5320269:1:exon

XP_029388578.1
type: Protein
SIO_000068: ncbiprotein

position:5320269:1
position: 5320269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5247416-5252578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5254636-5254728:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5288346-5288492:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5293562-5293792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5294026-5294151:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5296308-5296645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5301767-5301868:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5302947-5303009:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5310595-5310655:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5312062-5312223:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5315945-5316094:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5320040-5320269:1:exon

Smarca5
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Smarca5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5322743..5361251)
location: region:5322743-5361251:-1
so has part: feature:5322743-5361251:-1:exon
subclass of: SO_0000010

110337190
type: Gene
SIO_000068: ncbigene

position:5322743:-1
position: 5322743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5361251:-1
position: 5361251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5322743-5361251:-1:exon

Smarca5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Smarca5
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 mRNAs, 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021219951.2
SIO_010081: Smarca5
subclass of: SO_0000673
so part of: Smarca5
location: complement(join(5322743..5323940,5325430..5325537,5327977..5328189,5328598..5328716,5328847..5328979,5331863..5331985,5332296..5332409,5332845..5332955,5333723..5333842,5334830..5334978,5336855..5336987,5339321..5339473,5340543..5340664,5341353..5341579,5342456..5342565,5345737..5345805,5347778..5347909,5347999..5348154,5349405..5349584,5350250..5350350,5351877..5351977,5355271..5355437,5358302..5358376,5360668..5361251))
location: region:5322743-5361251:-1
so has part: feature:5360668-5361251:-1:exon
so has part: feature:5358302-5358376:-1:exon
so has part: feature:5355271-5355437:-1:exon
so has part: feature:5351877-5351977:-1:exon
so has part: feature:5350250-5350350:-1:exon
so has part: feature:5349405-5349584:-1:exon
so has part: feature:5347999-5348154:-1:exon
so has part: feature:5347778-5347909:-1:exon
so has part: feature:5345737-5345805:-1:exon
so has part: feature:5342456-5342565:-1:exon
so has part: feature:5341353-5341579:-1:exon
so has part: feature:5340543-5340664:-1:exon
so has part: feature:5339321-5339473:-1:exon
so has part: feature:5336855-5336987:-1:exon
so has part: feature:5334830-5334978:-1:exon
so has part: feature:5333723-5333842:-1:exon
so has part: feature:5332845-5332955:-1:exon
so has part: feature:5332296-5332409:-1:exon
so has part: feature:5331863-5331985:-1:exon
so has part: feature:5328847-5328979:-1:exon
so has part: feature:5328598-5328716:-1:exon
so has part: feature:5327977-5328189:-1:exon
so has part: feature:5325430-5325537:-1:exon
so has part: feature:5322743-5323940:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5360668-5361251:-1:exon

position:5360668:-1
position: 5360668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5358302-5358376:-1:exon

position:5358302:-1
position: 5358302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5358376:-1
position: 5358376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5355271-5355437:-1:exon

position:5355271:-1
position: 5355271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5355437:-1
position: 5355437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5351877-5351977:-1:exon

position:5351877:-1
position: 5351877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5351977:-1
position: 5351977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5350250-5350350:-1:exon

position:5350250:-1
position: 5350250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5350350:-1
position: 5350350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5349405-5349584:-1:exon

position:5349405:-1
position: 5349405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5349584:-1
position: 5349584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5347999-5348154:-1:exon

position:5347999:-1
position: 5347999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5348154:-1
position: 5348154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5347778-5347909:-1:exon

position:5347778:-1
position: 5347778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5347909:-1
position: 5347909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5345737-5345805:-1:exon

position:5345737:-1
position: 5345737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5345805:-1
position: 5345805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5342456-5342565:-1:exon

position:5342456:-1
position: 5342456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5342565:-1
position: 5342565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5341353-5341579:-1:exon

position:5341353:-1
position: 5341353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5341579:-1
position: 5341579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5340543-5340664:-1:exon

position:5340543:-1
position: 5340543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5340664:-1
position: 5340664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5339321-5339473:-1:exon

position:5339321:-1
position: 5339321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5339473:-1
position: 5339473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5336855-5336987:-1:exon

position:5336855:-1
position: 5336855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5336987:-1
position: 5336987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5334830-5334978:-1:exon

position:5334830:-1
position: 5334830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5334978:-1
position: 5334978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5333723-5333842:-1:exon

position:5333723:-1
position: 5333723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5333842:-1
position: 5333842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5332845-5332955:-1:exon

position:5332845:-1
position: 5332845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5332955:-1
position: 5332955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5332296-5332409:-1:exon

position:5332296:-1
position: 5332296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5332409:-1
position: 5332409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5331863-5331985:-1:exon

position:5331863:-1
position: 5331863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5331985:-1
position: 5331985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5328847-5328979:-1:exon

position:5328847:-1
position: 5328847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5328979:-1
position: 5328979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5328598-5328716:-1:exon

position:5328598:-1
position: 5328598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5328716:-1
position: 5328716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5327977-5328189:-1:exon

position:5327977:-1
position: 5327977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5328189:-1
position: 5328189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5325430-5325537:-1:exon

position:5325430:-1
position: 5325430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5325537:-1
position: 5325537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5322743-5323940:-1:exon

position:5323940:-1
position: 5323940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Smarca5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Smarca5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
translation: MSSAVEPPPPPPPESAPSKPSAAGAGGSSSGNKGGPEGGAAPAAPCAAGSGPADTEMEEVFDDGSPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRVKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRSPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
SIO_010081: Smarca5
subclass of: SO_0000673
so part of: Smarca5
location: complement(join(5323875..5323940,5325430..5325537,5327977..5328189,5328598..5328716,5328847..5328979,5331863..5331985,5332296..5332409,5332845..5332955,5333723..5333842,5334830..5334978,5336855..5336987,5339321..5339473,5340543..5340664,5341353..5341579,5342456..5342565,5345737..5345805,5347778..5347909,5347999..5348154,5349405..5349584,5350250..5350350,5351877..5351977,5355271..5355437,5358302..5358376,5360668..5360841))
location: region:5323875-5360841:-1
so has part: feature:5360668-5360841:-1:exon
so has part: feature:5358302-5358376:-1:exon
so has part: feature:5355271-5355437:-1:exon
so has part: feature:5351877-5351977:-1:exon
so has part: feature:5350250-5350350:-1:exon
so has part: feature:5349405-5349584:-1:exon
so has part: feature:5347999-5348154:-1:exon
so has part: feature:5347778-5347909:-1:exon
so has part: feature:5345737-5345805:-1:exon
so has part: feature:5342456-5342565:-1:exon
so has part: feature:5341353-5341579:-1:exon
so has part: feature:5340543-5340664:-1:exon
so has part: feature:5339321-5339473:-1:exon
so has part: feature:5336855-5336987:-1:exon
so has part: feature:5334830-5334978:-1:exon
so has part: feature:5333723-5333842:-1:exon
so has part: feature:5332845-5332955:-1:exon
so has part: feature:5332296-5332409:-1:exon
so has part: feature:5331863-5331985:-1:exon
so has part: feature:5328847-5328979:-1:exon
so has part: feature:5328598-5328716:-1:exon
so has part: feature:5327977-5328189:-1:exon
so has part: feature:5325430-5325537:-1:exon
so has part: feature:5323875-5323940:-1:exon

XP_021075610.1
type: Protein
SIO_000068: ncbiprotein

position:5323875:-1
position: 5323875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5360841:-1
position: 5360841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5360668-5360841:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5358302-5358376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5355271-5355437:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5351877-5351977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5350250-5350350:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5349405-5349584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5347999-5348154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5347778-5347909:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5345737-5345805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5342456-5342565:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5341353-5341579:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5340543-5340664:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5339321-5339473:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5336855-5336987:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5334830-5334978:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5333723-5333842:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5332845-5332955:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5332296-5332409:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5331863-5331985:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5328847-5328979:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5328598-5328716:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5327977-5328189:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5325430-5325537:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5323875-5323940:-1:exon

Gab1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Gab1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5387071..5493090)
location: region:5387071-5493090:-1
so has part: feature:5387071-5493090:-1:exon
subclass of: SO_0000010

110337474
type: Gene
SIO_000068: ncbigene

position:5387071:-1
position: 5387071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5493090:-1
position: 5493090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5387071-5493090:-1:exon

Gab1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Gab1
product: GRB2 associated binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021220410.2
SIO_010081: Gab1
subclass of: SO_0000673
so part of: Gab1
location: complement(join(5387071..5388241,5391638..5391760,5397129..5397252,5397509..5397602,5407361..5407664,5407823..5407908,5411223..5411827,5414307..5414532,5423027..5423321,5492144..5493090))
location: region:5387071-5493090:-1
so has part: feature:5492144-5493090:-1:exon
so has part: feature:5423027-5423321:-1:exon
so has part: feature:5414307-5414532:-1:exon
so has part: feature:5411223-5411827:-1:exon
so has part: feature:5407823-5407908:-1:exon
so has part: feature:5407361-5407664:-1:exon
so has part: feature:5397509-5397602:-1:exon
so has part: feature:5397129-5397252:-1:exon
so has part: feature:5391638-5391760:-1:exon
so has part: feature:5387071-5388241:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5492144-5493090:-1:exon

position:5492144:-1
position: 5492144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5423027-5423321:-1:exon

position:5423027:-1
position: 5423027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5423321:-1
position: 5423321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5414307-5414532:-1:exon

position:5414307:-1
position: 5414307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5414532:-1
position: 5414532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5411223-5411827:-1:exon

position:5411223:-1
position: 5411223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5411827:-1
position: 5411827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5407823-5407908:-1:exon

position:5407823:-1
position: 5407823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5407908:-1
position: 5407908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5407361-5407664:-1:exon

position:5407361:-1
position: 5407361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5407664:-1
position: 5407664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5397509-5397602:-1:exon

position:5397509:-1
position: 5397509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5397602:-1
position: 5397602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5397129-5397252:-1:exon

position:5397129:-1
position: 5397129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5397252:-1
position: 5397252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5391638-5391760:-1:exon

position:5391638:-1
position: 5391638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5391760:-1
position: 5391760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5387071-5388241:-1:exon

position:5388241:-1
position: 5388241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Gab1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Gab1
product: GRB2 associated binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021220408.2
SIO_010081: Gab1
subclass of: SO_0000673
so part of: Gab1
location: complement(join(5387071..5388241,5391638..5391760,5397129..5397252,5397509..5397602,5398747..5398836,5407361..5407664,5407823..5407908,5411223..5411827,5414307..5414532,5423027..5423321,5492144..5493090))
location: region:5387071-5493090:-1
so has part: feature:5492144-5493090:-1:exon
so has part: feature:5423027-5423321:-1:exon
so has part: feature:5414307-5414532:-1:exon
so has part: feature:5411223-5411827:-1:exon
so has part: feature:5407823-5407908:-1:exon
so has part: feature:5407361-5407664:-1:exon
so has part: feature:5398747-5398836:-1:exon
so has part: feature:5397509-5397602:-1:exon
so has part: feature:5397129-5397252:-1:exon
so has part: feature:5391638-5391760:-1:exon
so has part: feature:5387071-5388241:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5492144-5493090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5423027-5423321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5414307-5414532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5411223-5411827:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5407823-5407908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5407361-5407664:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5398747-5398836:-1:exon

position:5398747:-1
position: 5398747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5398836:-1
position: 5398836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5397509-5397602:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5397129-5397252:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5391638-5391760:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5387071-5388241:-1:exon

Gab1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Gab1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRB2-associated-binding protein 1 isoform X2
translation: MSGGEVVCSGWLRKSPPEKKLKRYAWKRRWFVLRSGRLTGDPDVLEYYKNDHAKKPIRIIDLNLCQQVDAGLTFNKKEFENSYIFDINTIDRIFYLVADSEEDMNKWVRCICDICGFNPTEEDPVKPLTGSSQAPVDSPFAISTAPASSQMEASSVALPPPYQVISLPPHPDTLGLQDDPQDYLLLINCQSKKPEPTRTHFDSAKPTSSETDCNDNVPSHKTPASSQSKHGMNGFFQQQMMYDCPPSRLTSVSGESSLYNLPRSYSHDVLPKESSSSPEADGELYTFNTPSGTAGVETQMRHVSISYDIPPTPGNTYQIPRTFPEGTLGQSSKLDTIPDIPPPRPPKPHPTHDRSPVETCGVPRTASDTDGSYCIPPPAGMTPSRSNTISTVDLNKLRKDSSSQDCYDIPRTFPSDRSSSLEGFHSQYKIKSVLTAGGVSGEELDENYVPMNPNSPPRQHSSSFTEPIQEPNYVPMTPGTFDFSSFGMQVPPPAHMGFRSSPKTPPRRPVPVADCEPPPVDRNLKPDRKVKPAPLEIKPLSEWEELQAPVRSPITRSFARDSSRFPMSPRPDSVHSTTSSSDSHDSEENYVPMNPNLSGEDPNLFGGGSLDGASSPMNKPKGDKQVEYLDLDLDSGKSTPPRKQKNSGSGSSMADERVDYVVVDQQKTLALKSTREAWTDGRQSTESETPTKNVK
SIO_010081: Gab1
subclass of: SO_0000673
so part of: Gab1
location: complement(join(5388083..5388241,5391638..5391760,5397129..5397252,5397509..5397602,5407361..5407664,5407823..5407908,5411223..5411827,5414307..5414532,5423027..5423321,5492144..5492215))
location: region:5388083-5492215:-1
so has part: feature:5492144-5492215:-1:exon
so has part: feature:5423027-5423321:-1:exon
so has part: feature:5414307-5414532:-1:exon
so has part: feature:5411223-5411827:-1:exon
so has part: feature:5407823-5407908:-1:exon
so has part: feature:5407361-5407664:-1:exon
so has part: feature:5397509-5397602:-1:exon
so has part: feature:5397129-5397252:-1:exon
so has part: feature:5391638-5391760:-1:exon
so has part: feature:5388083-5388241:-1:exon

XP_021076069.1
type: Protein
SIO_000068: ncbiprotein

position:5388083:-1
position: 5388083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5492215:-1
position: 5492215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5492144-5492215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5423027-5423321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5414307-5414532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5411223-5411827:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5407823-5407908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5407361-5407664:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5397509-5397602:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5397129-5397252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5391638-5391760:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5388083-5388241:-1:exon

Gab1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Gab1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRB2-associated-binding protein 1 isoform X1
translation: MSGGEVVCSGWLRKSPPEKKLKRYAWKRRWFVLRSGRLTGDPDVLEYYKNDHAKKPIRIIDLNLCQQVDAGLTFNKKEFENSYIFDINTIDRIFYLVADSEEDMNKWVRCICDICGFNPTEEDPVKPLTGSSQAPVDSPFAISTAPASSQMEASSVALPPPYQVISLPPHPDTLGLQDDPQDYLLLINCQSKKPEPTRTHFDSAKPTSSETDCNDNVPSHKTPASSQSKHGMNGFFQQQMMYDCPPSRLTSVSGESSLYNLPRSYSHDVLPKESSSSPEADGELYTFNTPSGTAGVETQMRHVSISYDIPPTPGNTYQIPRTFPEGTLGQSSKLDTIPDIPPPRPPKPHPTHDRSPVETCGVPRTASDTDGSYCIPPPAGMTPSRSNTISTVDLNKLRKDSSSQDCYDIPRTFPSDRSSSLEGFHSQYKIKSVLTAGGVSGEELDENYVPMNPNSPPRQHSSSFTEPIQEPNYVPMTPGTFDFSSFGMQVPPPAHMGFRSSPKTPPRRPVPVADCEPPPVDRNLKPDRKGQSPKILRPKPHGLERSDSQTIGDFATRRKVKPAPLEIKPLSEWEELQAPVRSPITRSFARDSSRFPMSPRPDSVHSTTSSSDSHDSEENYVPMNPNLSGEDPNLFGGGSLDGASSPMNKPKGDKQVEYLDLDLDSGKSTPPRKQKNSGSGSSMADERVDYVVVDQQKTLALKSTREAWTDGRQSTESETPTKNVK
SIO_010081: Gab1
subclass of: SO_0000673
so part of: Gab1
location: complement(join(5388083..5388241,5391638..5391760,5397129..5397252,5397509..5397602,5398747..5398836,5407361..5407664,5407823..5407908,5411223..5411827,5414307..5414532,5423027..5423321,5492144..5492215))
location: region:5388083-5492215:-1
so has part: feature:5492144-5492215:-1:exon
so has part: feature:5423027-5423321:-1:exon
so has part: feature:5414307-5414532:-1:exon
so has part: feature:5411223-5411827:-1:exon
so has part: feature:5407823-5407908:-1:exon
so has part: feature:5407361-5407664:-1:exon
so has part: feature:5398747-5398836:-1:exon
so has part: feature:5397509-5397602:-1:exon
so has part: feature:5397129-5397252:-1:exon
so has part: feature:5391638-5391760:-1:exon
so has part: feature:5388083-5388241:-1:exon

XP_021076067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5492144-5492215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5423027-5423321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5414307-5414532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5411223-5411827:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5407823-5407908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5407361-5407664:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5398747-5398836:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5397509-5397602:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5397129-5397252:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5391638-5391760:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5388083-5388241:-1:exon

LOC110337483
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5392720..5393679
location: region:5392720-5393679:1
so has part: feature:5392720-5393679:1:exon

110337483
type: Gene
SIO_000068: ncbigene

position:5392720:1
position: 5392720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5393679:1
position: 5393679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5392720-5393679:1:exon

LOC110337483
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337483
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110337483
subclass of: SO_0000673
so part of: LOC110337483
location: 5392720..5393679
location: region:5392720-5393679:1
so has part: feature:5392720-5393679:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5392720-5393679:1:exon

Usp38
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Usp38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5593865..5625003)
location: region:5593865-5625003:-1
so has part: feature:5593865-5625003:-1:exon
subclass of: SO_0000010

110337637
type: Gene
SIO_000068: ncbigene

position:5593865:-1
position: 5593865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5625003:-1
position: 5625003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5593865-5625003:-1:exon

Usp38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Usp38
product: ubiquitin specific peptidase 38
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021220659.2
SIO_010081: Usp38
subclass of: SO_0000673
so part of: Usp38
location: complement(join(5593865..5594994,5597571..5598933,5600162..5600268,5602499..5602592,5606299..5606492,5608910..5609068,5613563..5613664,5616314..5616443,5622077..5622212,5623851..5625003))
location: region:5593865-5625003:-1
so has part: feature:5623851-5625003:-1:exon
so has part: feature:5622077-5622212:-1:exon
so has part: feature:5616314-5616443:-1:exon
so has part: feature:5613563-5613664:-1:exon
so has part: feature:5608910-5609068:-1:exon
so has part: feature:5606299-5606492:-1:exon
so has part: feature:5602499-5602592:-1:exon
so has part: feature:5600162-5600268:-1:exon
so has part: feature:5597571-5598933:-1:exon
so has part: feature:5593865-5594994:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5623851-5625003:-1:exon

position:5623851:-1
position: 5623851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5622077-5622212:-1:exon

position:5622077:-1
position: 5622077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5622212:-1
position: 5622212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5616314-5616443:-1:exon

position:5616314:-1
position: 5616314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5616443:-1
position: 5616443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5613563-5613664:-1:exon

position:5613563:-1
position: 5613563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5613664:-1
position: 5613664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5608910-5609068:-1:exon

position:5608910:-1
position: 5608910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5609068:-1
position: 5609068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5606299-5606492:-1:exon

position:5606299:-1
position: 5606299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5606492:-1
position: 5606492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5602499-5602592:-1:exon

position:5602499:-1
position: 5602499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5602592:-1
position: 5602592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5600162-5600268:-1:exon

position:5600162:-1
position: 5600162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5600268:-1
position: 5600268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5597571-5598933:-1:exon

position:5597571:-1
position: 5597571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5598933:-1
position: 5598933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5593865-5594994:-1:exon

position:5594994:-1
position: 5594994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Usp38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Usp38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 38
translation: MDKILEGLVSSSHPLPLKRMIVRKVVEFAEHWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQQGYHSLDRKDVAILDYIHNGLKLIMSCPSVLELFSLLQVEVLRMVCERPEPLLCARLSDLLTDFVQCVPKGKLSITFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSTLLQNIWKAEPSTLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTALLVQLTELVHCMMYHYSGFPDLYEPVLEAIKDFPKPSEEKIKLILNQSAWTSQSNALASCLSRLSGKSETGKTGLINLGNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILRVQSSHKPSEGLDCAETCLQEVASKVAVPTESPGTADSEKTLIEKMFGGKLRTHICCLNCGSTSHKVEAFTDLSLAFCPSPSVEDLSFQDTASLPSAPDDGLMQTSVTDPEEEPVVYNPATAAFVCDSVVNQRVLGSAPVEFHCAENSSAPEDSAKILISKDGPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTASFSSLSQSWSVDVDFTDINENLPKKLKPSGTEEALCPQLVPYLLSSVVVHSGVSSESGHYYSYARNITGTESSYQMCPQSESLALAPSQSCLLGIENPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQSRANGIGSDNPASGVWVNGDPPLQKELMDAITKDNKLYLQEQELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF
SIO_010081: Usp38
subclass of: SO_0000673
so part of: Usp38
location: complement(join(5594833..5594994,5597571..5598933,5600162..5600268,5602499..5602592,5606299..5606492,5608910..5609068,5613563..5613664,5616314..5616443,5622077..5622212,5623851..5624532))
location: region:5594833-5624532:-1
so has part: feature:5623851-5624532:-1:exon
so has part: feature:5622077-5622212:-1:exon
so has part: feature:5616314-5616443:-1:exon
so has part: feature:5613563-5613664:-1:exon
so has part: feature:5608910-5609068:-1:exon
so has part: feature:5606299-5606492:-1:exon
so has part: feature:5602499-5602592:-1:exon
so has part: feature:5600162-5600268:-1:exon
so has part: feature:5597571-5598933:-1:exon
so has part: feature:5594833-5594994:-1:exon

XP_021076318.1
type: Protein
SIO_000068: ncbiprotein

position:5594833:-1
position: 5594833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5624532:-1
position: 5624532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5623851-5624532:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5622077-5622212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5616314-5616443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5613563-5613664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5608910-5609068:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5606299-5606492:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5602499-5602592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5600162-5600268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5597571-5598933:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5594833-5594994:-1:exon

LOC110337773
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5910563..5911048)
location: region:5910563-5911048:-1
so has part: feature:5910563-5911048:-1:exon
subclass of: SO_0000010

110337773
type: Gene
SIO_000068: ncbigene

position:5910563:-1
position: 5910563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5911048:-1
position: 5911048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5910563-5911048:-1:exon

LOC110337773
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: LOC110337773
product: glyceraldehyde-3-phosphate dehydrogenase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_021220820.1
SIO_010081: LOC110337773
subclass of: SO_0000673
so part of: LOC110337773
location: complement(5910563..5911048)
location: region:5910563-5911048:-1
so has part: feature:5910563-5911048:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5910563-5911048:-1:exon

LOC110337773
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: LOC110337773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glyceraldehyde-3-phosphate dehydrogenase-like
translation: MTTVCAITATQRIIHGLSGKLWGDGRGATQDIIPISTGAAKAVGKVIPELNGKLTSIAFYIPTPNVSIVDLTCCLEKAAKYDDIKTIVKQALKDPLKGNLGYTEDQVVSYDLNSDSHSSTFGAGAGMALNDNFVKLISWYSNEYSCNSRVVDHMVYMAFKE
SIO_010081: LOC110337773
subclass of: SO_0000673
so part of: LOC110337773
location: complement(5910563..5911048)
location: region:5910563-5911048:-1
so has part: feature:5910563-5911048:-1:exon

XP_021076479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5910563-5911048:-1:exon

Inpp4b
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Inpp4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5942776..6694183
location: region:5942776-6694183:1
so has part: feature:5942776-6694183:1:exon
subclass of: SO_0000010

110337280
type: Gene
SIO_000068: ncbigene

position:5942776:1
position: 5942776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6694183:1
position: 6694183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5942776-6694183:1:exon

Inpp4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Inpp4b
product: inositol polyphosphate-4-phosphatase type II B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021220100.1
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
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urn:…
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Inpp4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Inpp4b
product: inositol polyphosphate-4-phosphatase type II B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021220101.2
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
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SIO_000300: 26
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position:6689095:1
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reference: sequence
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Inpp4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Inpp4b
product: inositol polyphosphate-4-phosphatase type II B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532468.1
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
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position:6688472:1
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reference: sequence
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 26
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Inpp4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Inpp4b
product: inositol polyphosphate-4-phosphatase type II B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532469.1
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
location: join(5942824..5943011,6072369..6072431,6311883..6311946,6330127..6330336,6333179..6333223,6354348..6354466,6356787..6356903,6434148..6434198,6445370..6445449,6475438..6475549,6482070..6482142,6495966..6496113,6527098..6527228,6527606..6527710,6540217..6540325,6564748..6564925,6576845..6577048,6590955..6591120,6611311..6611483,6612625..6612748,6613813..6613930,6617416..6617556,6619669..6619766,6638402..6638514,6640886..6641040,6687705..6687924)
location: region:5942824-6687924:1
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so has part: feature:6590955-6591120:1:exon
so has part: feature:6611311-6611483:1:exon
so has part: feature:6612625-6612748:1:exon
so has part: feature:6613813-6613930:1:exon
so has part: feature:6617416-6617556:1:exon
so has part: feature:6619669-6619766:1:exon
so has part: feature:6638402-6638514:1:exon
so has part: feature:6640886-6641040:1:exon
so has part: feature:6687705-6687924:1:exon

position:6687924:1
position: 6687924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5942824-5943011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6072369-6072431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6311883-6311946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6330127-6330336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6333179-6333223:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6354348-6354466:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6356787-6356903:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6434148-6434198:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6445370-6445449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6475438-6475549:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6482070-6482142:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6495966-6496113:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6527098-6527228:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6527606-6527710:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6540217-6540325:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6564748-6564925:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6576845-6577048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6590955-6591120:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6611311-6611483:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6612625-6612748:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6613813-6613930:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6617416-6617556:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6619669-6619766:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6638402-6638514:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6640886-6641040:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6687705-6687924:1:exon

position:6687705:1
position: 6687705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Inpp4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Inpp4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type II inositol 3,4-bisphosphate 4-phosphatase isoform X4
translation: MEIKEEGTSEEGQHFLPAAQANDPEDIQFTSIQKIPNEPQLEFILACRDLVAPVSDRKLNTVVQISVIHPVEQTLRRYSSTEVVEGTKDPLFLTGVTFPSDYPIYEETRIKLTVYDVKDKSHDTIRTSVLPEHQDPPPEVARSFLGCASFKVGELLKSKEQLLSLSLRTSDGGKVVGTIEVSLVKMGEIEDGDTNHITTNVQGQKCALMYESTAPKSLSRKENLPFMNAVLRNPVCKLYRFPTSDNKWMRIHEQMSESILSFHIPKELISLHIKEDLCRNQELKELGDLSPHWDNLRKNVLSHCDQMVTMYQDILTELSKETGSSFKSSSSKGEKTLEFVPVNLHLQRMRVHSPHLKDALYDVITVGAPAAHFQGFKNGGLRKLLHRFETERRNTGYQFIYYSPEKTAKAKEVLSSINQLQPLIATHADLLLTSASQRSPDSLKSSLKLLSEKTELFVHAFEDQLVRSALLALYTARPGGVLKKPPSPNVSTEEKNTQHDTPQLRRQDSIPHHSDYDEEEWDRVWVNVGKSLNYIIAKVDKLIERDSHNEEGAGGSSSKEGEADPTLEDSITSHPCEDWYEQLHPLILALKECIGEVVNRAKQSLTFVLLQELAYSLPQCLMLTLRRDIVFSQALAGLVCGFIIKLHTSLHDPGFLQQLHTVGLIVQYEGLLSTYSDEIGMLEDMAVGISDLRKVAFKITEATSNDVLPVLTGRREHYVVEVKLPATVFELLPLQIKEGQLLHVHPVLFNVGINEQQTLAERFGDVSLQESINQENFELVQEYYSIFMEKMPPDYISHFQEQNDLKGLLDNLHQNIQSKKRKNVEIMWLAATICRKLNGIRFTCCKSAKDRTSMSVTLEQCSILRDEHQLHEDFFNRALDCMRREGCRIENVLKNMKCRRYAFNMLQLMAFPKCYRPPEGTY
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
location: join(6330246..6330336,6333179..6333223,6354348..6354466,6356787..6356903,6434148..6434198,6445370..6445449,6475438..6475549,6482070..6482142,6495966..6496113,6527098..6527228,6527606..6527710,6540217..6540325,6564748..6564925,6576845..6577048,6590955..6591120,6611311..6611483,6612625..6612748,6613813..6613930,6617416..6617556,6619669..6619766,6638402..6638514,6640886..6641040,6689095..6689212)
location: region:6330246-6689212:1
so has part: feature:6330246-6330336:1:exon
so has part: feature:6333179-6333223:1:exon
so has part: feature:6354348-6354466:1:exon
so has part: feature:6356787-6356903:1:exon
so has part: feature:6434148-6434198:1:exon
so has part: feature:6445370-6445449:1:exon
so has part: feature:6475438-6475549:1:exon
so has part: feature:6482070-6482142:1:exon
so has part: feature:6495966-6496113:1:exon
so has part: feature:6527098-6527228:1:exon
so has part: feature:6527606-6527710:1:exon
so has part: feature:6540217-6540325:1:exon
so has part: feature:6564748-6564925:1:exon
so has part: feature:6576845-6577048:1:exon
so has part: feature:6590955-6591120:1:exon
so has part: feature:6611311-6611483:1:exon
so has part: feature:6612625-6612748:1:exon
so has part: feature:6613813-6613930:1:exon
so has part: feature:6617416-6617556:1:exon
so has part: feature:6619669-6619766:1:exon
so has part: feature:6638402-6638514:1:exon
so has part: feature:6640886-6641040:1:exon
so has part: feature:6689095-6689212:1:exon

XP_021075760.1
type: Protein
SIO_000068: ncbiprotein

position:6330246:1
position: 6330246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6689212:1
position: 6689212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6330246-6330336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6333179-6333223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6354348-6354466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6356787-6356903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6434148-6434198:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6445370-6445449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6475438-6475549:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6482070-6482142:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6495966-6496113:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6527098-6527228:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6527606-6527710:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6540217-6540325:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6564748-6564925:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6576845-6577048:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6590955-6591120:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6611311-6611483:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6612625-6612748:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6613813-6613930:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6617416-6617556:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6619669-6619766:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6638402-6638514:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6640886-6641040:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6689095-6689212:1:exon

Inpp4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Inpp4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type II inositol 3,4-bisphosphate 4-phosphatase isoform X1
translation: MEIKEEGTSEEGQHFLPAAQANDPEDIQFTSIQKIPNEPQLEFILACRDLVAPVSDRKLNTVVQISVIHPVEQTLRRYSSTEVVEGTKDPLFLTGVTFPSDYPIYEETRIKLTVYDVKDKSHDTIRTSVLPEHQDPPPEVARSFLGCASFKVGELLKSKEQLLSLSLRTSDGGKVVGTIEVSLVKMGEIEDGDTNHITTNVQGQKCALMYESTAPKSLSRKENLPFMNAVLRNPVCKLYRFPTSDNKWMRIHEQMSESILSFHIPKELISLHIKEDLCRNQELKELGDLSPHWDNLRKNVLSHCDQMVTMYQDILTELSKETGSSFKSSSSKGEKTLEFVPVNLHLQRMRVHSPHLKDALYDVITVGAPAAHFQGFKNGGLRKLLHRFETERRNTGYQFIYYSPEKTAKAKEVLSSINQLQPLIATHADLLLTSASQRSPDSLKSSLKLLSEKTELFVHAFEDQLVRSALLALYTARPGGVLKKPPSPNVSTEEKNTQHDTPQLRRQDSIPHHSDYDEEEWDRVWVNVGKSLNYIIAKVDKLIERDSHNEEGAGGSSSKEGEADPTLEDSITSHPCEDWYEQLHPLILALKECIGEVVNRAKQSLTFVLLQELAYSLPQCLMLTLRRDIVFSQALAGLVCGFIIKLHTSLHDPGFLQQLHTVGLIVQYEGLLSTYSDEIGMLEDMAVGISDLRKVAFKITEATSNDVLPVLTGRREHYVVEVKLPATVFELLPLQIKEGQLLHVHPVLFNVGINEQQTLAERFGDVSLQESINQENFELVQEYYSIFMEKMPPDYISHFQEQNDLKGLLDNLHQNIQSKKRKNVEIMWLAATICRKLNGIRFTCCKSAKDRTSMSVTLEQCSILRDEHQLHEDFFNRALDCMRSRQTQGAWNESDDPETGCLTDNKPAPRHFYPVALLLVSSHLLVVWLILSLALLLAKYQ
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
location: join(6330246..6330336,6333179..6333223,6354348..6354466,6356787..6356903,6434148..6434198,6445370..6445449,6475438..6475549,6482070..6482142,6495966..6496113,6527098..6527228,6527606..6527710,6540217..6540325,6564748..6564925,6576845..6577048,6590955..6591120,6611311..6611483,6612625..6612748,6613813..6613930,6617416..6617556,6619669..6619766,6638402..6638514,6640886..6641040,6687702..6687876)
location: region:6330246-6687876:1
so has part: feature:6330246-6330336:1:exon
so has part: feature:6333179-6333223:1:exon
so has part: feature:6354348-6354466:1:exon
so has part: feature:6356787-6356903:1:exon
so has part: feature:6434148-6434198:1:exon
so has part: feature:6445370-6445449:1:exon
so has part: feature:6475438-6475549:1:exon
so has part: feature:6482070-6482142:1:exon
so has part: feature:6495966-6496113:1:exon
so has part: feature:6527098-6527228:1:exon
so has part: feature:6527606-6527710:1:exon
so has part: feature:6540217-6540325:1:exon
so has part: feature:6564748-6564925:1:exon
so has part: feature:6576845-6577048:1:exon
so has part: feature:6590955-6591120:1:exon
so has part: feature:6611311-6611483:1:exon
so has part: feature:6612625-6612748:1:exon
so has part: feature:6613813-6613930:1:exon
so has part: feature:6617416-6617556:1:exon
so has part: feature:6619669-6619766:1:exon
so has part: feature:6638402-6638514:1:exon
so has part: feature:6640886-6641040:1:exon
so has part: feature:6687702-6687876:1:exon

XP_029388328.1
type: Protein
SIO_000068: ncbiprotein

position:6687876:1
position: 6687876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6330246-6330336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6333179-6333223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6354348-6354466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6356787-6356903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6434148-6434198:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6445370-6445449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6475438-6475549:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6482070-6482142:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6495966-6496113:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6527098-6527228:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6527606-6527710:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6540217-6540325:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6564748-6564925:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6576845-6577048:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6590955-6591120:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6611311-6611483:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6612625-6612748:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6613813-6613930:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6617416-6617556:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6619669-6619766:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6638402-6638514:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6640886-6641040:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6687702-6687876:1:exon

Inpp4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Inpp4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type II inositol 3,4-bisphosphate 4-phosphatase isoform X2
translation: MEIKEEGTSEEGQHFLPAAQANDPEDIQFTSIQKIPNEPQLEFILACRDLVAPVSDRKLNTVVQISVIHPVEQTLRRYSSTEVVEGTKDPLFLTGVTFPSDYPIYEETRIKLTVYDVKDKSHDTIRTSVLPEHQDPPPEVARSFLGCASFKVGELLKSKEQLLSLSLRTSDGGKVVGTIEVSLVKMGEIEDGDTNHITTNVQGQKCALMYESTAPKSLSRKENLPFMNAVLRNPVCKLYRFPTSDNKWMRIHEQMSESILSFHIPKELISLHIKEDLCRNQELKELGDLSPHWDNLRKNVLSHCDQMVTMYQDILTELSKETGSSFKSSSSKGEKTLEFVPVNLHLQRMRVHSPHLKDALYDVITVGAPAAHFQGFKNGGLRKLLHRFETERRNTGYQFIYYSPEKTAKAKEVLSSINQLQPLIATHADLLLTSASQRSPDSLKSSLKLLSEKTELFVHAFEDQLVRSALLALYTARPGGVLKKPPSPNVSTEEKNTQHDTPQLRRQDSIPHHSDYDEEEWDRVWVNVGKSLNYIIAKVDKLIERDSHNEEGAGGSSSKEGEADPTLEDSITSHPCEDWYEQLHPLILALKECIGEVVNRAKQSLTFVLLQELAYSLPQCLMLTLRRDIVFSQALAGLVCGFIIKLHTSLHDPGFLQQLHTVGLIVQYEGLLSTYSDEIGMLEDMAVGISDLRKVAFKITEATSNDVLPVLTGRREHYVVEVKLPATVFELLPLQIKEGQLLHVHPVLFNVGINEQQTLAERFGDVSLQESINQENFELVQEYYSIFMEKMPPDYISHFQEQNDLKGLLDNLHQNIQSKKRKNVEIMWLAATICRKLNGIRFTCCKSAKDRTSMSVTLEQCSILRDEHQLHEDFFNRALDCMRRQTQGAWNESDDPETGCLTDNKPAPRHFYPVALLLVSSHLLVVWLILSLALLLAKYQ
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
location: join(6330246..6330336,6333179..6333223,6354348..6354466,6356787..6356903,6434148..6434198,6445370..6445449,6475438..6475549,6482070..6482142,6495966..6496113,6527098..6527228,6527606..6527710,6540217..6540325,6564748..6564925,6576845..6577048,6590955..6591120,6611311..6611483,6612625..6612748,6613813..6613930,6617416..6617556,6619669..6619766,6638402..6638514,6640886..6641040,6687705..6687876)
location: region:6330246-6687876:1
so has part: feature:6330246-6330336:1:exon
so has part: feature:6333179-6333223:1:exon
so has part: feature:6354348-6354466:1:exon
so has part: feature:6356787-6356903:1:exon
so has part: feature:6434148-6434198:1:exon
so has part: feature:6445370-6445449:1:exon
so has part: feature:6475438-6475549:1:exon
so has part: feature:6482070-6482142:1:exon
so has part: feature:6495966-6496113:1:exon
so has part: feature:6527098-6527228:1:exon
so has part: feature:6527606-6527710:1:exon
so has part: feature:6540217-6540325:1:exon
so has part: feature:6564748-6564925:1:exon
so has part: feature:6576845-6577048:1:exon
so has part: feature:6590955-6591120:1:exon
so has part: feature:6611311-6611483:1:exon
so has part: feature:6612625-6612748:1:exon
so has part: feature:6613813-6613930:1:exon
so has part: feature:6617416-6617556:1:exon
so has part: feature:6619669-6619766:1:exon
so has part: feature:6638402-6638514:1:exon
so has part: feature:6640886-6641040:1:exon
so has part: feature:6687705-6687876:1:exon

XP_029388329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6330246-6330336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6333179-6333223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6354348-6354466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6356787-6356903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6434148-6434198:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6445370-6445449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6475438-6475549:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6482070-6482142:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6495966-6496113:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6527098-6527228:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6527606-6527710:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6540217-6540325:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6564748-6564925:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6576845-6577048:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6590955-6591120:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6611311-6611483:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6612625-6612748:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6613813-6613930:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6617416-6617556:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6619669-6619766:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6638402-6638514:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6640886-6641040:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6687705-6687876:1:exon

Inpp4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Inpp4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type II inositol 3,4-bisphosphate 4-phosphatase isoform X3
translation: MEIKEEGTSEEGQHFLPAAQANDPEDIQFTSIQKIPNEPQLEFILACRDLVAPVSDRKLNTVVQISVIHPVEQTLRRYSSTEVVEGTKDPLFLTGVTFPSDYPIYEETRIKLTVYDVKDKSHDTRSFLGCASFKVGELLKSKEQLLSLSLRTSDGGKVVGTIEVSLVKMGEIEDGDTNHITTNVQGQKCALMYESTAPKSLSRKENLPFMNAVLRNPVCKLYRFPTSDNKWMRIHEQMSESILSFHIPKELISLHIKEDLCRNQELKELGDLSPHWDNLRKNVLSHCDQMVTMYQDILTELSKETGSSFKSSSSKGEKTLEFVPVNLHLQRMRVHSPHLKDALYDVITVGAPAAHFQGFKNGGLRKLLHRFETERRNTGYQFIYYSPEKTAKAKEVLSSINQLQPLIATHADLLLTSASQRSPDSLKSSLKLLSEKTELFVHAFEDQLVRSALLALYTARPGGVLKKPPSPNVSTEEKNTQHDTPQLRRQDSIPHHSDYDEEEWDRVWVNVGKSLNYIIAKVDKLIERDSHNEEGAGGSSSKEGEADPTLEDSITSHPCEDWYEQLHPLILALKECIGEVVNRAKQSLTFVLLQELAYSLPQCLMLTLRRDIVFSQALAGLVCGFIIKLHTSLHDPGFLQQLHTVGLIVQYEGLLSTYSDEIGMLEDMAVGISDLRKVAFKITEATSNDVLPVLTGRREHYVVEVKLPATVFELLPLQIKEGQLLHVHPVLFNVGINEQQTLAERFGDVSLQESINQENFELVQEYYSIFMEKMPPDYISHFQEQNDLKGLLDNLHQNIQSKKRKNVEIMWLAATICRKLNGIRFTCCKSAKDRTSMSVTLEQCSILRDEHQLHEDFFNRALDCMRSRQTQGAWNESDDPETGCLTDNKPAPRHFYPVALLLVSSHLLVVWLILSLALLLAKYQ
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
location: join(6330246..6330336,6333179..6333223,6354348..6354466,6356787..6356903,6445370..6445449,6475438..6475549,6482070..6482142,6495966..6496113,6527098..6527228,6527606..6527710,6540217..6540325,6564748..6564925,6576845..6577048,6590955..6591120,6611311..6611483,6612625..6612748,6613813..6613930,6617416..6617556,6619669..6619766,6638402..6638514,6640886..6641040,6687702..6687876)
location: region:6330246-6687876:1
so has part: feature:6330246-6330336:1:exon
so has part: feature:6333179-6333223:1:exon
so has part: feature:6354348-6354466:1:exon
so has part: feature:6356787-6356903:1:exon
so has part: feature:6445370-6445449:1:exon
so has part: feature:6475438-6475549:1:exon
so has part: feature:6482070-6482142:1:exon
so has part: feature:6495966-6496113:1:exon
so has part: feature:6527098-6527228:1:exon
so has part: feature:6527606-6527710:1:exon
so has part: feature:6540217-6540325:1:exon
so has part: feature:6564748-6564925:1:exon
so has part: feature:6576845-6577048:1:exon
so has part: feature:6590955-6591120:1:exon
so has part: feature:6611311-6611483:1:exon
so has part: feature:6612625-6612748:1:exon
so has part: feature:6613813-6613930:1:exon
so has part: feature:6617416-6617556:1:exon
so has part: feature:6619669-6619766:1:exon
so has part: feature:6638402-6638514:1:exon
so has part: feature:6640886-6641040:1:exon
so has part: feature:6687702-6687876:1:exon

XP_021075759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6330246-6330336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6333179-6333223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6354348-6354466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6356787-6356903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6445370-6445449:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6475438-6475549:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6482070-6482142:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6495966-6496113:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6527098-6527228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6527606-6527710:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6540217-6540325:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6564748-6564925:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6576845-6577048:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6590955-6591120:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6611311-6611483:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6612625-6612748:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6613813-6613930:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6617416-6617556:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6619669-6619766:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6638402-6638514:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6640886-6641040:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6687702-6687876:1:exon

LOC110337752
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6376669..6377118)
location: region:6376669-6377118:-1
so has part: feature:6376669-6377118:-1:exon

110337752
type: Gene
SIO_000068: ncbigene

position:6376669:-1
position: 6376669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6377118:-1
position: 6377118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6376669-6377118:-1:exon

LOC110337752
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337752
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC110337752
subclass of: SO_0000673
so part of: LOC110337752
location: complement(6376669..6377118)
location: region:6376669-6377118:-1
so has part: feature:6376669-6377118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6376669-6377118:-1:exon

LOC110337753
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6415691..6416718
location: region:6415691-6416718:1
so has part: feature:6415691-6416718:1:exon

110337753
type: Gene
SIO_000068: ncbigene

position:6415691:1
position: 6415691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6416718:1
position: 6416718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6415691-6416718:1:exon

LOC110337753
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC110337753
subclass of: SO_0000673
so part of: LOC110337753
location: 6415691..6416373
location: region:6415691-6416373:1
so has part: feature:6415691-6416373:1:exon

position:6416373:1
position: 6416373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6415691-6416373:1:exon

LOC110337753
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC110337753
subclass of: SO_0000673
so part of: LOC110337753
location: 6416622..6416718
location: region:6416622-6416718:1
so has part: feature:6416622-6416718:1:exon

position:6416622:1
position: 6416622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6416622-6416718:1:exon

Inpp4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Inpp4b
product: inositol polyphosphate-4-phosphatase type II B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532470.1
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
location: join(6445058..6445215,6445370..6445449,6475438..6475549,6482070..6482142,6495966..6496113,6527098..6527228,6527606..6527710,6540217..6540325,6564748..6564925,6576845..6577048,6590955..6591120,6611311..6611483,6612625..6612748,6613813..6613930,6617416..6617556,6619669..6619766,6638402..6638514,6640886..6641040,6687702..6688472)
location: region:6445058-6688472:1
so has part: feature:6445058-6445215:1:exon
so has part: feature:6445370-6445449:1:exon
so has part: feature:6475438-6475549:1:exon
so has part: feature:6482070-6482142:1:exon
so has part: feature:6495966-6496113:1:exon
so has part: feature:6527098-6527228:1:exon
so has part: feature:6527606-6527710:1:exon
so has part: feature:6540217-6540325:1:exon
so has part: feature:6564748-6564925:1:exon
so has part: feature:6576845-6577048:1:exon
so has part: feature:6590955-6591120:1:exon
so has part: feature:6611311-6611483:1:exon
so has part: feature:6612625-6612748:1:exon
so has part: feature:6613813-6613930:1:exon
so has part: feature:6617416-6617556:1:exon
so has part: feature:6619669-6619766:1:exon
so has part: feature:6638402-6638514:1:exon
so has part: feature:6640886-6641040:1:exon
so has part: feature:6687702-6688472:1:exon

position:6445058:1
position: 6445058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6445058-6445215:1:exon

position:6445215:1
position: 6445215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6445370-6445449:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6475438-6475549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6482070-6482142:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6495966-6496113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6527098-6527228:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6527606-6527710:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6540217-6540325:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6564748-6564925:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6576845-6577048:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6590955-6591120:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6611311-6611483:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6612625-6612748:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6613813-6613930:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6617416-6617556:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6619669-6619766:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6638402-6638514:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6640886-6641040:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6687702-6688472:1:exon

Inpp4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Inpp4b
product: inositol polyphosphate-4-phosphatase type II B, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532471.1
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
location: join(6445058..6445178,6445370..6445449,6475438..6475549,6482070..6482142,6495966..6496113,6527098..6527228,6527606..6527710,6540217..6540325,6564748..6564925,6576845..6577048,6590955..6591120,6611311..6611483,6612625..6612748,6613813..6613930,6617416..6617556,6619669..6619766,6638402..6638514,6640886..6641040,6687702..6688472)
location: region:6445058-6688472:1
so has part: feature:6445058-6445178:1:exon
so has part: feature:6445370-6445449:1:exon
so has part: feature:6475438-6475549:1:exon
so has part: feature:6482070-6482142:1:exon
so has part: feature:6495966-6496113:1:exon
so has part: feature:6527098-6527228:1:exon
so has part: feature:6527606-6527710:1:exon
so has part: feature:6540217-6540325:1:exon
so has part: feature:6564748-6564925:1:exon
so has part: feature:6576845-6577048:1:exon
so has part: feature:6590955-6591120:1:exon
so has part: feature:6611311-6611483:1:exon
so has part: feature:6612625-6612748:1:exon
so has part: feature:6613813-6613930:1:exon
so has part: feature:6617416-6617556:1:exon
so has part: feature:6619669-6619766:1:exon
so has part: feature:6638402-6638514:1:exon
so has part: feature:6640886-6641040:1:exon
so has part: feature:6687702-6688472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6445058-6445178:1:exon

position:6445178:1
position: 6445178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6445370-6445449:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6475438-6475549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6482070-6482142:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6495966-6496113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6527098-6527228:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6527606-6527710:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6540217-6540325:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6564748-6564925:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6576845-6577048:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6590955-6591120:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6611311-6611483:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6612625-6612748:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6613813-6613930:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6617416-6617556:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6619669-6619766:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6638402-6638514:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6640886-6641040:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6687702-6688472:1:exon

Inpp4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Inpp4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type II inositol 3,4-bisphosphate 4-phosphatase isoform X5
translation: MGEIEDGDTNHITTNVQGQKCALMYESTAPKSLSRKENLPFMNAVLRNPVCKLYRFPTSDNKWMRIHEQMSESILSFHIPKELISLHIKEDLCRNQELKELGDLSPHWDNLRKNVLSHCDQMVTMYQDILTELSKETGSSFKSSSSKGEKTLEFVPVNLHLQRMRVHSPHLKDALYDVITVGAPAAHFQGFKNGGLRKLLHRFETERRNTGYQFIYYSPEKTAKAKEVLSSINQLQPLIATHADLLLTSASQRSPDSLKSSLKLLSEKTELFVHAFEDQLVRSALLALYTARPGGVLKKPPSPNVSTEEKNTQHDTPQLRRQDSIPHHSDYDEEEWDRVWVNVGKSLNYIIAKVDKLIERDSHNEEGAGGSSSKEGEADPTLEDSITSHPCEDWYEQLHPLILALKECIGEVVNRAKQSLTFVLLQELAYSLPQCLMLTLRRDIVFSQALAGLVCGFIIKLHTSLHDPGFLQQLHTVGLIVQYEGLLSTYSDEIGMLEDMAVGISDLRKVAFKITEATSNDVLPVLTGRREHYVVEVKLPATVFELLPLQIKEGQLLHVHPVLFNVGINEQQTLAERFGDVSLQESINQENFELVQEYYSIFMEKMPPDYISHFQEQNDLKGLLDNLHQNIQSKKRKNVEIMWLAATICRKLNGIRFTCCKSAKDRTSMSVTLEQCSILRDEHQLHEDFFNRALDCMRSRQTQGAWNESDDPETGCLTDNKPAPRHFYPVALLLVSSHLLVVWLILSLALLLAKYQ
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
location: join(6475490..6475549,6482070..6482142,6495966..6496113,6527098..6527228,6527606..6527710,6540217..6540325,6564748..6564925,6576845..6577048,6590955..6591120,6611311..6611483,6612625..6612748,6613813..6613930,6617416..6617556,6619669..6619766,6638402..6638514,6640886..6641040,6687702..6687876)
location: region:6475490-6687876:1
so has part: feature:6475490-6475549:1:exon
so has part: feature:6482070-6482142:1:exon
so has part: feature:6495966-6496113:1:exon
so has part: feature:6527098-6527228:1:exon
so has part: feature:6527606-6527710:1:exon
so has part: feature:6540217-6540325:1:exon
so has part: feature:6564748-6564925:1:exon
so has part: feature:6576845-6577048:1:exon
so has part: feature:6590955-6591120:1:exon
so has part: feature:6611311-6611483:1:exon
so has part: feature:6612625-6612748:1:exon
so has part: feature:6613813-6613930:1:exon
so has part: feature:6617416-6617556:1:exon
so has part: feature:6619669-6619766:1:exon
so has part: feature:6638402-6638514:1:exon
so has part: feature:6640886-6641040:1:exon
so has part: feature:6687702-6687876:1:exon

XP_029388330.1
type: Protein
SIO_000068: ncbiprotein

position:6475490:1
position: 6475490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6475490-6475549:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6482070-6482142:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6495966-6496113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6527098-6527228:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6527606-6527710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6540217-6540325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6564748-6564925:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6576845-6577048:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6590955-6591120:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6611311-6611483:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6612625-6612748:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6613813-6613930:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6617416-6617556:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6619669-6619766:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6638402-6638514:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6640886-6641040:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6687702-6687876:1:exon

Inpp4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Inpp4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type II inositol 3,4-bisphosphate 4-phosphatase isoform X5
translation: MGEIEDGDTNHITTNVQGQKCALMYESTAPKSLSRKENLPFMNAVLRNPVCKLYRFPTSDNKWMRIHEQMSESILSFHIPKELISLHIKEDLCRNQELKELGDLSPHWDNLRKNVLSHCDQMVTMYQDILTELSKETGSSFKSSSSKGEKTLEFVPVNLHLQRMRVHSPHLKDALYDVITVGAPAAHFQGFKNGGLRKLLHRFETERRNTGYQFIYYSPEKTAKAKEVLSSINQLQPLIATHADLLLTSASQRSPDSLKSSLKLLSEKTELFVHAFEDQLVRSALLALYTARPGGVLKKPPSPNVSTEEKNTQHDTPQLRRQDSIPHHSDYDEEEWDRVWVNVGKSLNYIIAKVDKLIERDSHNEEGAGGSSSKEGEADPTLEDSITSHPCEDWYEQLHPLILALKECIGEVVNRAKQSLTFVLLQELAYSLPQCLMLTLRRDIVFSQALAGLVCGFIIKLHTSLHDPGFLQQLHTVGLIVQYEGLLSTYSDEIGMLEDMAVGISDLRKVAFKITEATSNDVLPVLTGRREHYVVEVKLPATVFELLPLQIKEGQLLHVHPVLFNVGINEQQTLAERFGDVSLQESINQENFELVQEYYSIFMEKMPPDYISHFQEQNDLKGLLDNLHQNIQSKKRKNVEIMWLAATICRKLNGIRFTCCKSAKDRTSMSVTLEQCSILRDEHQLHEDFFNRALDCMRSRQTQGAWNESDDPETGCLTDNKPAPRHFYPVALLLVSSHLLVVWLILSLALLLAKYQ
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
location: join(6475490..6475549,6482070..6482142,6495966..6496113,6527098..6527228,6527606..6527710,6540217..6540325,6564748..6564925,6576845..6577048,6590955..6591120,6611311..6611483,6612625..6612748,6613813..6613930,6617416..6617556,6619669..6619766,6638402..6638514,6640886..6641040,6687702..6687876)
location: region:6475490-6687876:1
so has part: feature:6475490-6475549:1:exon
so has part: feature:6482070-6482142:1:exon
so has part: feature:6495966-6496113:1:exon
so has part: feature:6527098-6527228:1:exon
so has part: feature:6527606-6527710:1:exon
so has part: feature:6540217-6540325:1:exon
so has part: feature:6564748-6564925:1:exon
so has part: feature:6576845-6577048:1:exon
so has part: feature:6590955-6591120:1:exon
so has part: feature:6611311-6611483:1:exon
so has part: feature:6612625-6612748:1:exon
so has part: feature:6613813-6613930:1:exon
so has part: feature:6617416-6617556:1:exon
so has part: feature:6619669-6619766:1:exon
so has part: feature:6638402-6638514:1:exon
so has part: feature:6640886-6641040:1:exon
so has part: feature:6687702-6687876:1:exon

XP_029388331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6475490-6475549:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6482070-6482142:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6495966-6496113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6527098-6527228:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6527606-6527710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6540217-6540325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6564748-6564925:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6576845-6577048:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6590955-6591120:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6611311-6611483:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6612625-6612748:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6613813-6613930:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6617416-6617556:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6619669-6619766:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6638402-6638514:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6640886-6641040:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6687702-6687876:1:exon

LOC115062726
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062726
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6724095..6724155)
location: region:6724095-6724155:-1
so has part: feature:6724095-6724155:-1:exon
subclass of: SO_0000623

115062726
type: Gene
SIO_000068: ncbigene

position:6724095:-1
position: 6724095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6724155:-1
position: 6724155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6724095-6724155:-1:exon

LOC115062726
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snRNA
gene: LOC115062726
product: U7 small nuclear RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00066
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842656.1
SIO_010081: LOC115062726
subclass of: SO_0000673
so part of: LOC115062726
location: complement(6724095..6724155)
location: region:6724095-6724155:-1
so has part: feature:6724095-6724155:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6724095-6724155:-1:exon

LOC115062740
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062740
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6775643..6775786)
location: region:6775643-6775786:-1
so has part: feature:6775643-6775786:-1:exon
subclass of: SO_0000578

115062740
type: Gene
SIO_000068: ncbigene

position:6775643:-1
position: 6775643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6775786:-1
position: 6775786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6775643-6775786:-1:exon

LOC115062740
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snoRNA
gene: LOC115062740
product: small nucleolar RNA SNORA48
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00554
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842669.1
SIO_010081: LOC115062740
subclass of: SO_0000673
so part of: LOC115062740
location: complement(6775643..6775786)
location: region:6775643-6775786:-1
so has part: feature:6775643-6775786:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6775643-6775786:-1:exon

LOC110337745
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6804363..6805008)
location: region:6804363-6805008:-1
so has part: feature:6804363-6805008:-1:exon

110337745
type: Gene
SIO_000068: ncbigene

position:6804363:-1
position: 6804363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6805008:-1
position: 6805008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6804363-6805008:-1:exon

LOC110337745
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337745
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110337745
subclass of: SO_0000673
so part of: LOC110337745
location: complement(6804363..6805008)
location: region:6804363-6805008:-1
so has part: feature:6804363-6805008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6804363-6805008:-1:exon

Il15
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Il15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6894312..6961525)
location: region:6894312-6961525:-1
so has part: feature:6894312-6961525:-1:exon
subclass of: SO_0000010

110337630
type: Gene
SIO_000068: ncbigene

position:6894312:-1
position: 6894312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6961525:-1
position: 6961525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6894312-6961525:-1:exon

Il15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Il15
product: interleukin 15, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021220641.1
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(6894312..6894712,6896821..6896958,6899161..6899205,6904879..6904963,6906001..6906098,6907238..6907336,6940093..6940214,6960600..6961525))
location: region:6894312-6961525:-1
so has part: feature:6960600-6961525:-1:exon
so has part: feature:6940093-6940214:-1:exon
so has part: feature:6907238-6907336:-1:exon
so has part: feature:6906001-6906098:-1:exon
so has part: feature:6904879-6904963:-1:exon
so has part: feature:6899161-6899205:-1:exon
so has part: feature:6896821-6896958:-1:exon
so has part: feature:6894312-6894712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6960600-6961525:-1:exon

position:6960600:-1
position: 6960600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6940093-6940214:-1:exon

position:6940093:-1
position: 6940093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6940214:-1
position: 6940214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6907238-6907336:-1:exon

position:6907238:-1
position: 6907238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6907336:-1
position: 6907336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6906001-6906098:-1:exon

position:6906001:-1
position: 6906001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6906098:-1
position: 6906098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6904879-6904963:-1:exon

position:6904879:-1
position: 6904879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6904963:-1
position: 6904963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6899161-6899205:-1:exon

position:6899161:-1
position: 6899161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6899205:-1
position: 6899205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6896821-6896958:-1:exon

position:6896821:-1
position: 6896821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6896958:-1
position: 6896958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6894312-6894712:-1:exon

position:6894712:-1
position: 6894712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Il15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Il15
product: interleukin 15, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021220643.2
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(6894312..6894712,6896821..6896958,6899161..6899205,6904879..6904963,6906001..6906098,6907238..6907336,6940093..6940214,6960610..6961032))
location: region:6894312-6961032:-1
so has part: feature:6960610-6961032:-1:exon
so has part: feature:6940093-6940214:-1:exon
so has part: feature:6907238-6907336:-1:exon
so has part: feature:6906001-6906098:-1:exon
so has part: feature:6904879-6904963:-1:exon
so has part: feature:6899161-6899205:-1:exon
so has part: feature:6896821-6896958:-1:exon
so has part: feature:6894312-6894712:-1:exon

position:6961032:-1
position: 6961032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6960610-6961032:-1:exon

position:6960610:-1
position: 6960610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6940093-6940214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6907238-6907336:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6906001-6906098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6904879-6904963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6899161-6899205:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6896821-6896958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6894312-6894712:-1:exon

Il15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Il15
product: interleukin 15, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029532331.1
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(6894349..6894712,6896821..6896958,6899161..6899205,6904879..6904963,6906001..6906098,6907238..6907336,6940093..6940214,6960600..6960717,6961047..6961181,6961277..6961345))
location: region:6894349-6961345:-1
so has part: feature:6961277-6961345:-1:exon
so has part: feature:6961047-6961181:-1:exon
so has part: feature:6960600-6960717:-1:exon
so has part: feature:6940093-6940214:-1:exon
so has part: feature:6907238-6907336:-1:exon
so has part: feature:6906001-6906098:-1:exon
so has part: feature:6904879-6904963:-1:exon
so has part: feature:6899161-6899205:-1:exon
so has part: feature:6896821-6896958:-1:exon
so has part: feature:6894349-6894712:-1:exon

position:6894349:-1
position: 6894349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6961345:-1
position: 6961345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6961277-6961345:-1:exon

position:6961277:-1
position: 6961277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6961047-6961181:-1:exon

position:6961047:-1
position: 6961047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6961181:-1
position: 6961181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6960600-6960717:-1:exon

position:6960717:-1
position: 6960717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6940093-6940214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6907238-6907336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6906001-6906098:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6904879-6904963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6899161-6899205:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6896821-6896958:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6894349-6894712:-1:exon

Il15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Il15
product: interleukin 15, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029532330.1
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(6894349..6894712,6896821..6896958,6899161..6899205,6904879..6904963,6906001..6906098,6907238..6907336,6940093..6940214,6961047..6961334))
location: region:6894349-6961334:-1
so has part: feature:6961047-6961334:-1:exon
so has part: feature:6940093-6940214:-1:exon
so has part: feature:6907238-6907336:-1:exon
so has part: feature:6906001-6906098:-1:exon
so has part: feature:6904879-6904963:-1:exon
so has part: feature:6899161-6899205:-1:exon
so has part: feature:6896821-6896958:-1:exon
so has part: feature:6894349-6894712:-1:exon

position:6961334:-1
position: 6961334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6961047-6961334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6940093-6940214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6907238-6907336:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6906001-6906098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6904879-6904963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6899161-6899205:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6896821-6896958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6894349-6894712:-1:exon

Il15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Il15
product: interleukin 15, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532329.1
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(6894349..6894712,6896821..6896958,6899161..6899205,6904879..6904963,6906001..6906098,6907238..6907336,6940093..6940214,6960600..6960717,6961047..6961334))
location: region:6894349-6961334:-1
so has part: feature:6961047-6961334:-1:exon
so has part: feature:6960600-6960717:-1:exon
so has part: feature:6940093-6940214:-1:exon
so has part: feature:6907238-6907336:-1:exon
so has part: feature:6906001-6906098:-1:exon
so has part: feature:6904879-6904963:-1:exon
so has part: feature:6899161-6899205:-1:exon
so has part: feature:6896821-6896958:-1:exon
so has part: feature:6894349-6894712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6961047-6961334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6960600-6960717:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6940093-6940214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6907238-6907336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6906001-6906098:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6904879-6904963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6899161-6899205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6896821-6896958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6894349-6894712:-1:exon

Il15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Il15
product: interleukin 15, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021220645.2
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(6894349..6894712,6896821..6896910,6899161..6899205,6904879..6904963,6906001..6906098,6907238..6907336,6940093..6940214,6960600..6961032))
location: region:6894349-6961032:-1
so has part: feature:6960600-6961032:-1:exon
so has part: feature:6940093-6940214:-1:exon
so has part: feature:6907238-6907336:-1:exon
so has part: feature:6906001-6906098:-1:exon
so has part: feature:6904879-6904963:-1:exon
so has part: feature:6899161-6899205:-1:exon
so has part: feature:6896821-6896910:-1:exon
so has part: feature:6894349-6894712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6960600-6961032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6940093-6940214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6907238-6907336:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6906001-6906098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6904879-6904963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6899161-6899205:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6896821-6896910:-1:exon

position:6896910:-1
position: 6896910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6894349-6894712:-1:exon

Il15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Il15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-15 isoform X2
translation: MKILKPYMRNTSISCYLCFLLNSHFLTEAGIHVFILGCVSVVLPKTEANWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHVILHEYSNMTLNETVRNVLYLANSTLSSNKNVAESGCKECEELEEKTFTEFLQSFIRIVQMFINTS
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(6894602..6894712,6896821..6896910,6899161..6899205,6904879..6904963,6906001..6906098,6907238..6907249))
location: region:6894602-6907249:-1
so has part: feature:6907238-6907249:-1:exon
so has part: feature:6906001-6906098:-1:exon
so has part: feature:6904879-6904963:-1:exon
so has part: feature:6899161-6899205:-1:exon
so has part: feature:6896821-6896910:-1:exon
so has part: feature:6894602-6894712:-1:exon

XP_021076304.1
type: Protein
SIO_000068: ncbiprotein

position:6894602:-1
position: 6894602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6907249:-1
position: 6907249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6907238-6907249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6906001-6906098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6904879-6904963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6899161-6899205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6896821-6896910:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6894602-6894712:-1:exon

Il15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Il15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-15 isoform X1
translation: MKILKPYMRNTSISCYLCFLLNSHFLTEAGIHVFILGCVSVVLPKTEANWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHPSCKVTAMNCFLLELQVILHEYSNMTLNETVRNVLYLANSTLSSNKNVAESGCKECEELEEKTFTEFLQSFIRIVQMFINTS
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(6894602..6894712,6896821..6896958,6899161..6899205,6904879..6904963,6906001..6906098,6907238..6907249))
location: region:6894602-6907249:-1
so has part: feature:6907238-6907249:-1:exon
so has part: feature:6906001-6906098:-1:exon
so has part: feature:6904879-6904963:-1:exon
so has part: feature:6899161-6899205:-1:exon
so has part: feature:6896821-6896958:-1:exon
so has part: feature:6894602-6894712:-1:exon

XP_021076300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6907238-6907249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6906001-6906098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6904879-6904963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6899161-6899205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6896821-6896958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6894602-6894712:-1:exon

Il15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Il15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-15 isoform X1
translation: MKILKPYMRNTSISCYLCFLLNSHFLTEAGIHVFILGCVSVVLPKTEANWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHPSCKVTAMNCFLLELQVILHEYSNMTLNETVRNVLYLANSTLSSNKNVAESGCKECEELEEKTFTEFLQSFIRIVQMFINTS
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(6894602..6894712,6896821..6896958,6899161..6899205,6904879..6904963,6906001..6906098,6907238..6907249))
location: region:6894602-6907249:-1
so has part: feature:6907238-6907249:-1:exon
so has part: feature:6906001-6906098:-1:exon
so has part: feature:6904879-6904963:-1:exon
so has part: feature:6899161-6899205:-1:exon
so has part: feature:6896821-6896958:-1:exon
so has part: feature:6894602-6894712:-1:exon

XP_021076302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6907238-6907249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6906001-6906098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6904879-6904963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6899161-6899205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6896821-6896958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6894602-6894712:-1:exon

Il15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Il15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-15 isoform X1
translation: MKILKPYMRNTSISCYLCFLLNSHFLTEAGIHVFILGCVSVVLPKTEANWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHPSCKVTAMNCFLLELQVILHEYSNMTLNETVRNVLYLANSTLSSNKNVAESGCKECEELEEKTFTEFLQSFIRIVQMFINTS
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(6894602..6894712,6896821..6896958,6899161..6899205,6904879..6904963,6906001..6906098,6907238..6907249))
location: region:6894602-6907249:-1
so has part: feature:6907238-6907249:-1:exon
so has part: feature:6906001-6906098:-1:exon
so has part: feature:6904879-6904963:-1:exon
so has part: feature:6899161-6899205:-1:exon
so has part: feature:6896821-6896958:-1:exon
so has part: feature:6894602-6894712:-1:exon

XP_029388189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6907238-6907249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6906001-6906098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6904879-6904963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6899161-6899205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6896821-6896958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6894602-6894712:-1:exon

Il15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Il15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-15 isoform X1
translation: MKILKPYMRNTSISCYLCFLLNSHFLTEAGIHVFILGCVSVVLPKTEANWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHPSCKVTAMNCFLLELQVILHEYSNMTLNETVRNVLYLANSTLSSNKNVAESGCKECEELEEKTFTEFLQSFIRIVQMFINTS
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(6894602..6894712,6896821..6896958,6899161..6899205,6904879..6904963,6906001..6906098,6907238..6907249))
location: region:6894602-6907249:-1
so has part: feature:6907238-6907249:-1:exon
so has part: feature:6906001-6906098:-1:exon
so has part: feature:6904879-6904963:-1:exon
so has part: feature:6899161-6899205:-1:exon
so has part: feature:6896821-6896958:-1:exon
so has part: feature:6894602-6894712:-1:exon

XP_029388190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6907238-6907249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6906001-6906098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6904879-6904963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6899161-6899205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6896821-6896958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6894602-6894712:-1:exon

Il15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Il15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-15 isoform X1
translation: MKILKPYMRNTSISCYLCFLLNSHFLTEAGIHVFILGCVSVVLPKTEANWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHPSCKVTAMNCFLLELQVILHEYSNMTLNETVRNVLYLANSTLSSNKNVAESGCKECEELEEKTFTEFLQSFIRIVQMFINTS
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(6894602..6894712,6896821..6896958,6899161..6899205,6904879..6904963,6906001..6906098,6907238..6907249))
location: region:6894602-6907249:-1
so has part: feature:6907238-6907249:-1:exon
so has part: feature:6906001-6906098:-1:exon
so has part: feature:6904879-6904963:-1:exon
so has part: feature:6899161-6899205:-1:exon
so has part: feature:6896821-6896958:-1:exon
so has part: feature:6894602-6894712:-1:exon

XP_029388191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6907238-6907249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6906001-6906098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6904879-6904963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6899161-6899205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6896821-6896958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6894602-6894712:-1:exon

LOC115062734
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062734
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6967688..6967823
location: region:6967688-6967823:1
so has part: feature:6967688-6967823:1:exon
subclass of: SO_0000578

115062734
type: Gene
SIO_000068: ncbigene

position:6967688:1
position: 6967688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6967823:1
position: 6967823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6967688-6967823:1:exon

LOC115062734
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snoRNA
gene: LOC115062734
product: small nucleolar RNA SNORA42/SNORA80 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00406
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842663.1
SIO_010081: LOC115062734
subclass of: SO_0000673
so part of: LOC115062734
location: 6967688..6967823
location: region:6967688-6967823:1
so has part: feature:6967688-6967823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6967688-6967823:1:exon

LOC110337774
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337774
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7118445..7119471
location: region:7118445-7119471:1
so has part: feature:7118445-7119471:1:exon

110337774
type: Gene
SIO_000068: ncbigene

position:7118445:1
position: 7118445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7119471:1
position: 7119471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7118445-7119471:1:exon

LOC110337774
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337774
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC110337774
subclass of: SO_0000673
so part of: LOC110337774
location: 7118445..7119471
location: region:7118445-7119471:1
so has part: feature:7118445-7119471:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7118445-7119471:1:exon

LOC110337601
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7246509..7247794)
location: region:7246509-7247794:-1
so has part: feature:7246509-7247794:-1:exon
subclass of: SO_0000010

110337601
type: Gene
SIO_000068: ncbigene

position:7246509:-1
position: 7246509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7247794:-1
position: 7247794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7246509-7247794:-1:exon

LOC110337601
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: LOC110337601
product: E3 ubiquitin-protein ligase RING2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029532343.1
SIO_010081: LOC110337601
subclass of: SO_0000673
so part of: LOC110337601
location: complement(7246509..7247794)
location: region:7246509-7247794:-1
so has part: feature:7246509-7247794:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7246509-7247794:-1:exon

LOC110337601
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: LOC110337601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING2
translation: MSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNRECPTCQKKLVSKRSLRPDPNFDALISKIYPSRDGDECEAHQERVLARINKHNNQQAPSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEVNGDSSHCSNASTHSNQEAGPSNERTKTSEDSGLELDNNNAAVAIDPVMGGASEIELVFRPHPTLMEKDDSAQTRYIKTSSNATVDHLSKYLAMRLALEELRSKGESNQMNLDTASEKQHTIYIATASGQFTVLNGSFSLELVSEKYWKVNKPMELYYAPTKEHK
SIO_010081: LOC110337601
subclass of: SO_0000673
so part of: LOC110337601
location: complement(7246712..7247728)
location: region:7246712-7247728:-1
so has part: feature:7246712-7247728:-1:exon

XP_029388203.1
type: Protein
SIO_000068: ncbiprotein

position:7246712:-1
position: 7246712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7247728:-1
position: 7247728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7246712-7247728:-1:exon

Znf330
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Znf330
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7270008..7280684)
location: region:7270008-7280684:-1
so has part: feature:7270008-7280684:-1:exon
subclass of: SO_0000010

110337451
type: Gene
SIO_000068: ncbigene

position:7270008:-1
position: 7270008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7280684:-1
position: 7280684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7270008-7280684:-1:exon

Znf330
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Znf330
product: zinc finger protein 330, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021220377.1
SIO_010081: Znf330
subclass of: SO_0000673
so part of: Znf330
location: complement(join(7270008..7270906,7271335..7271452,7272580..7272626,7273623..7273727,7274134..7274260,7276508..7276587,7277455..7277525,7277997..7278016,7279420..7279551,7280587..7280684))
location: region:7270008-7280684:-1
so has part: feature:7280587-7280684:-1:exon
so has part: feature:7279420-7279551:-1:exon
so has part: feature:7277997-7278016:-1:exon
so has part: feature:7277455-7277525:-1:exon
so has part: feature:7276508-7276587:-1:exon
so has part: feature:7274134-7274260:-1:exon
so has part: feature:7273623-7273727:-1:exon
so has part: feature:7272580-7272626:-1:exon
so has part: feature:7271335-7271452:-1:exon
so has part: feature:7270008-7270906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7280587-7280684:-1:exon

position:7280587:-1
position: 7280587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7279420-7279551:-1:exon

position:7279420:-1
position: 7279420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7279551:-1
position: 7279551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7277997-7278016:-1:exon

position:7277997:-1
position: 7277997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7278016:-1
position: 7278016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7277455-7277525:-1:exon

position:7277455:-1
position: 7277455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7277525:-1
position: 7277525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7276508-7276587:-1:exon

position:7276508:-1
position: 7276508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7276587:-1
position: 7276587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7274134-7274260:-1:exon

position:7274134:-1
position: 7274134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7274260:-1
position: 7274260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7273623-7273727:-1:exon

position:7273623:-1
position: 7273623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7273727:-1
position: 7273727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7272580-7272626:-1:exon

position:7272580:-1
position: 7272580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7272626:-1
position: 7272626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7271335-7271452:-1:exon

position:7271335:-1
position: 7271335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7271452:-1
position: 7271452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7270008-7270906:-1:exon

position:7270906:-1
position: 7270906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Znf330
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Znf330
product: zinc finger protein 330, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029532677.1
SIO_010081: Znf330
subclass of: SO_0000673
so part of: Znf330
location: complement(join(7270045..7270906,7271335..7271452,7272580..7272626,7273623..7273727,7274134..7274260,7276508..7276587,7277455..7277525,7277997..7278016,7279248..7279410))
location: region:7270045-7279410:-1
so has part: feature:7279248-7279410:-1:exon
so has part: feature:7277997-7278016:-1:exon
so has part: feature:7277455-7277525:-1:exon
so has part: feature:7276508-7276587:-1:exon
so has part: feature:7274134-7274260:-1:exon
so has part: feature:7273623-7273727:-1:exon
so has part: feature:7272580-7272626:-1:exon
so has part: feature:7271335-7271452:-1:exon
so has part: feature:7270045-7270906:-1:exon

position:7270045:-1
position: 7270045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7279410:-1
position: 7279410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7279248-7279410:-1:exon

position:7279248:-1
position: 7279248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7277997-7278016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7277455-7277525:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7276508-7276587:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7274134-7274260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7273623-7273727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7272580-7272626:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7271335-7271452:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7270045-7270906:-1:exon

Znf330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Znf330
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 330 isoform X2
translation: MPKKKTGARKKAENRREREKQLRASRSTVDLAKHPCNASMECDKCQRRQKNRAFCYFCNSVQKLPICAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHACACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNRLGQHSCLRCKACFCDEHTRSKVFKQEKGKQPPCPKCGHETQETKDLSMSTRSLKFGRQTGGEEGDGASGYDAYWKNLSSDKYGDTGYHDDDEEEDEAEDEEEEDGKDSDAESSDLFNNLNLGRTYASGYAHYEEQEN
SIO_010081: Znf330
subclass of: SO_0000673
so part of: Znf330
location: complement(join(7270641..7270906,7271335..7271452,7272580..7272626,7273623..7273727,7274134..7274260,7276508..7276587,7277455..7277525,7277997..7278016,7279420..7279539))
location: region:7270641-7279539:-1
so has part: feature:7279420-7279539:-1:exon
so has part: feature:7277997-7278016:-1:exon
so has part: feature:7277455-7277525:-1:exon
so has part: feature:7276508-7276587:-1:exon
so has part: feature:7274134-7274260:-1:exon
so has part: feature:7273623-7273727:-1:exon
so has part: feature:7272580-7272626:-1:exon
so has part: feature:7271335-7271452:-1:exon
so has part: feature:7270641-7270906:-1:exon

XP_021076036.1
type: Protein
SIO_000068: ncbiprotein

position:7270641:-1
position: 7270641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7279539:-1
position: 7279539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7279420-7279539:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7277997-7278016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7277455-7277525:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7276508-7276587:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7274134-7274260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7273623-7273727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7272580-7272626:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7271335-7271452:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7270641-7270906:-1:exon

Znf330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Znf330
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 330 isoform X1
translation: MEDCIVPYINKYLKNMINYGVPLPEEPVRGVLSILLSNSDVVVVVRECDKCQRRQKNRAFCYFCNSVQKLPICAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHACACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNRLGQHSCLRCKACFCDEHTRSKVFKQEKGKQPPCPKCGHETQETKDLSMSTRSLKFGRQTGGEEGDGASGYDAYWKNLSSDKYGDTGYHDDDEEEDEAEDEEEEDGKDSDAESSDLFNNLNLGRTYASGYAHYEEQEN
SIO_010081: Znf330
subclass of: SO_0000673
so part of: Znf330
location: complement(join(7270641..7270906,7271335..7271452,7272580..7272626,7273623..7273727,7274134..7274260,7276508..7276587,7277455..7277525,7277997..7278016,7279248..7279385))
location: region:7270641-7279385:-1
so has part: feature:7279248-7279385:-1:exon
so has part: feature:7277997-7278016:-1:exon
so has part: feature:7277455-7277525:-1:exon
so has part: feature:7276508-7276587:-1:exon
so has part: feature:7274134-7274260:-1:exon
so has part: feature:7273623-7273727:-1:exon
so has part: feature:7272580-7272626:-1:exon
so has part: feature:7271335-7271452:-1:exon
so has part: feature:7270641-7270906:-1:exon

XP_029388537.1
type: Protein
SIO_000068: ncbiprotein

position:7279385:-1
position: 7279385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7279248-7279385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7277997-7278016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7277455-7277525:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7276508-7276587:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7274134-7274260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7273623-7273727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7272580-7272626:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7271335-7271452:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7270641-7270906:-1:exon

Rnf150
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Rnf150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7360718..7566351
location: region:7360718-7566351:1
so has part: feature:7360718-7566351:1:exon
subclass of: SO_0000010

110337382
type: Gene
SIO_000068: ncbigene

position:7360718:1
position: 7360718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7566351:1
position: 7566351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7360718-7566351:1:exon

Rnf150
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Rnf150
product: ring finger protein 150, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532449.1
SIO_010081: Rnf150
subclass of: SO_0000673
so part of: Rnf150
location: join(7360718..7361224,7490019..7490269,7503910..7503948,7505774..7505845,7507928..7508010,7522225..7522321,7528900..7529110,7564868..7566351)
location: region:7360718-7566351:1
so has part: feature:7360718-7361224:1:exon
so has part: feature:7490019-7490269:1:exon
so has part: feature:7503910-7503948:1:exon
so has part: feature:7505774-7505845:1:exon
so has part: feature:7507928-7508010:1:exon
so has part: feature:7522225-7522321:1:exon
so has part: feature:7528900-7529110:1:exon
so has part: feature:7564868-7566351:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7360718-7361224:1:exon

position:7361224:1
position: 7361224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7490019-7490269:1:exon

position:7490019:1
position: 7490019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7490269:1
position: 7490269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7503910-7503948:1:exon

position:7503910:1
position: 7503910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7503948:1
position: 7503948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7505774-7505845:1:exon

position:7505774:1
position: 7505774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7505845:1
position: 7505845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7507928-7508010:1:exon

position:7507928:1
position: 7507928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7508010:1
position: 7508010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7522225-7522321:1:exon

position:7522225:1
position: 7522225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7522321:1
position: 7522321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7528900-7529110:1:exon

position:7528900:1
position: 7528900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7529110:1
position: 7529110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7564868-7566351:1:exon

position:7564868:1
position: 7564868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rnf150
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Rnf150
product: ring finger protein 150, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021220258.2
SIO_010081: Rnf150
subclass of: SO_0000673
so part of: Rnf150
location: join(7360738..7361224,7490019..7490269,7505774..7505845,7507928..7508010,7522225..7522321,7528900..7529110,7564868..7566351)
location: region:7360738-7566351:1
so has part: feature:7360738-7361224:1:exon
so has part: feature:7490019-7490269:1:exon
so has part: feature:7505774-7505845:1:exon
so has part: feature:7507928-7508010:1:exon
so has part: feature:7522225-7522321:1:exon
so has part: feature:7528900-7529110:1:exon
so has part: feature:7564868-7566351:1:exon

position:7360738:1
position: 7360738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7360738-7361224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7490019-7490269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7505774-7505845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7507928-7508010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7522225-7522321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7528900-7529110:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7564868-7566351:1:exon

Rnf150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Rnf150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 150 isoform X2
translation: MTMSLIQACRSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFVNITYMEPEAGAAVAGSGSGAELHTEKSECGRYGEHSPKQDARGEVVMASSAHDRLACDPNTKFAAPAHSKHWIALIPKGNCTYRDKIRNAFLQNASAVVIFNVGSNTNETITMPHAGVEDIVAIMIPEPKGKEIVSLLERNITVMMYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRNQYTIATGQDWQLYRRRLGDAAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKALGIPPNADCMDDLPIDFEGSLGGPPTNQITGASDTTVNESSVTLDPAVRTVGALQVVQDPDPAPEEGEAIFTTNSDQEPAVSSGSDISLIMALEVGLSDVELSTDQDCEEVKS
SIO_010081: Rnf150
subclass of: SO_0000673
so part of: Rnf150
location: join(7360744..7361224,7490019..7490269,7503910..7503948,7505774..7505845,7507928..7508010,7522225..7522321,7528900..7529110,7564868..7564986)
location: region:7360744-7564986:1
so has part: feature:7360744-7361224:1:exon
so has part: feature:7490019-7490269:1:exon
so has part: feature:7503910-7503948:1:exon
so has part: feature:7505774-7505845:1:exon
so has part: feature:7507928-7508010:1:exon
so has part: feature:7522225-7522321:1:exon
so has part: feature:7528900-7529110:1:exon
so has part: feature:7564868-7564986:1:exon

XP_029388309.1
type: Protein
SIO_000068: ncbiprotein

position:7360744:1
position: 7360744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7564986:1
position: 7564986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7360744-7361224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7490019-7490269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7503910-7503948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7505774-7505845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7507928-7508010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7522225-7522321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7528900-7529110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7564868-7564986:1:exon

Rnf150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Rnf150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 150 isoform X1
translation: MTMSLIQACRSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFVNITYMEPEAGAAVAGSGSGAELHTEKSECGRYGEHSPKQDARGEVVMASSAHDRLACDPNTKFAAPAHSKHWIALIPKGNCTYRDKIRNAFLQNASAVVIFNVGSNTNETITMPHAGVEDIVAIMIPEPKGKEIVSLLERNITVMMYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKALGIPPNADCMDDLPIDFEGSLGGPPTNQITGASDTTVNESSVTLDPAVRTVGALQVVQDPDPAPEEGEAIFTTNSDQEPAVSSGSDISLIMALEVGLSDVELSTDQDCEEVKS
SIO_010081: Rnf150
subclass of: SO_0000673
so part of: Rnf150
location: join(7360744..7361224,7490019..7490269,7505774..7505845,7507928..7508010,7522225..7522321,7528900..7529110,7564868..7564986)
location: region:7360744-7564986:1
so has part: feature:7360744-7361224:1:exon
so has part: feature:7490019-7490269:1:exon
so has part: feature:7505774-7505845:1:exon
so has part: feature:7507928-7508010:1:exon
so has part: feature:7522225-7522321:1:exon
so has part: feature:7528900-7529110:1:exon
so has part: feature:7564868-7564986:1:exon

XP_021075917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7360744-7361224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7490019-7490269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7505774-7505845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7507928-7508010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7522225-7522321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7528900-7529110:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7564868-7564986:1:exon

LOC110337754
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337754
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7394130..7394393
location: region:7394130-7394393:1
so has part: feature:7394130-7394393:1:exon

110337754
type: Gene
SIO_000068: ncbigene

position:7394130:1
position: 7394130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7394393:1
position: 7394393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7394130-7394393:1:exon

LOC110337754
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337754
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110337754
subclass of: SO_0000673
so part of: LOC110337754
location: 7394130..7394393
location: region:7394130-7394393:1
so has part: feature:7394130-7394393:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7394130-7394393:1:exon

LOC110337383
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337383
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7460709..7461163
location: region:7460709-7461163:1
so has part: feature:7460709-7461163:1:exon
subclass of: SO_0000010

110337383
type: Gene
SIO_000068: ncbigene

position:7460709:1
position: 7460709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7461163:1
position: 7461163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7460709-7461163:1:exon

LOC110337383
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: LOC110337383
product: 60S ribosomal protein L30-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021220260.2
SIO_010081: LOC110337383
subclass of: SO_0000673
so part of: LOC110337383
location: 7460709..7461163
location: region:7460709-7461163:1
so has part: feature:7460709-7461163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7460709-7461163:1:exon

LOC110337383
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: LOC110337383
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L30-like
translation: MVAAEKTKKSLESTNSRLQLVMKSGKCVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTRAIIDPGNSDIIRSMPEQTGEK
SIO_010081: LOC110337383
subclass of: SO_0000673
so part of: LOC110337383
location: 7460754..7461101
location: region:7460754-7461101:1
so has part: feature:7460754-7461101:1:exon

XP_021075919.1
type: Protein
SIO_000068: ncbiprotein

position:7460754:1
position: 7460754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7461101:1
position: 7461101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7460754-7461101:1:exon

LOC115062733
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062733
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7580225..7580356)
location: region:7580225-7580356:-1
so has part: feature:7580225-7580356:-1:exon
subclass of: SO_0000578

115062733
type: Gene
SIO_000068: ncbigene

position:7580225:-1
position: 7580225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7580356:-1
position: 7580356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7580225-7580356:-1:exon

LOC115062733
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snoRNA
gene: LOC115062733
product: small nucleolar RNA SNORA46
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00404
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003842662.1
SIO_010081: LOC115062733
subclass of: SO_0000673
so part of: LOC115062733
location: complement(7580225..7580356)
location: region:7580225-7580356:-1
so has part: feature:7580225-7580356:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7580225-7580356:-1:exon

Tbc1d9
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Tbc1d9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7648891..7753296
location: region:7648891-7753296:1
so has part: feature:7648891-7753296:1:exon
subclass of: SO_0000010

110337338
type: Gene
SIO_000068: ncbigene

position:7648891:1
position: 7648891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7753296:1
position: 7753296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7648891-7753296:1:exon

Tbc1d9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Tbc1d9
product: TBC1 domain family member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021220208.2
SIO_010081: Tbc1d9
subclass of: SO_0000673
so part of: Tbc1d9
location: join(7648891..7649761,7694323..7694433,7705372..7705490,7714539..7714767,7715169..7715430,7717541..7717748,7719444..7719650,7721161..7721331,7722210..7722360,7729097..7729311,7733217..7733334,7734171..7734456,7735449..7735578,7738692..7738790,7738986..7739054,7740616..7740856,7744377..7744442,7745620..7745706,7748165..7748239,7748326..7748429,7751229..7753296)
location: region:7648891-7753296:1
so has part: feature:7648891-7649761:1:exon
so has part: feature:7694323-7694433:1:exon
so has part: feature:7705372-7705490:1:exon
so has part: feature:7714539-7714767:1:exon
so has part: feature:7715169-7715430:1:exon
so has part: feature:7717541-7717748:1:exon
so has part: feature:7719444-7719650:1:exon
so has part: feature:7721161-7721331:1:exon
so has part: feature:7722210-7722360:1:exon
so has part: feature:7729097-7729311:1:exon
so has part: feature:7733217-7733334:1:exon
so has part: feature:7734171-7734456:1:exon
so has part: feature:7735449-7735578:1:exon
so has part: feature:7738692-7738790:1:exon
so has part: feature:7738986-7739054:1:exon
so has part: feature:7740616-7740856:1:exon
so has part: feature:7744377-7744442:1:exon
so has part: feature:7745620-7745706:1:exon
so has part: feature:7748165-7748239:1:exon
so has part: feature:7748326-7748429:1:exon
so has part: feature:7751229-7753296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7648891-7649761:1:exon

position:7649761:1
position: 7649761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7694323-7694433:1:exon

position:7694323:1
position: 7694323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7694433:1
position: 7694433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7705372-7705490:1:exon

position:7705372:1
position: 7705372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7705490:1
position: 7705490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7714539-7714767:1:exon

position:7714539:1
position: 7714539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7714767:1
position: 7714767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7715169-7715430:1:exon

position:7715169:1
position: 7715169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7715430:1
position: 7715430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7717541-7717748:1:exon

position:7717541:1
position: 7717541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7717748:1
position: 7717748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7719444-7719650:1:exon

position:7719444:1
position: 7719444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7719650:1
position: 7719650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7721161-7721331:1:exon

position:7721161:1
position: 7721161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7721331:1
position: 7721331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7722210-7722360:1:exon

position:7722210:1
position: 7722210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7722360:1
position: 7722360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7729097-7729311:1:exon

position:7729097:1
position: 7729097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7729311:1
position: 7729311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7733217-7733334:1:exon

position:7733217:1
position: 7733217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7733334:1
position: 7733334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7734171-7734456:1:exon

position:7734171:1
position: 7734171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7734456:1
position: 7734456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7735449-7735578:1:exon

position:7735449:1
position: 7735449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7735578:1
position: 7735578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7738692-7738790:1:exon

position:7738692:1
position: 7738692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7738790:1
position: 7738790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7738986-7739054:1:exon

position:7738986:1
position: 7738986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7739054:1
position: 7739054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7740616-7740856:1:exon

position:7740616:1
position: 7740616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7740856:1
position: 7740856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7744377-7744442:1:exon

position:7744377:1
position: 7744377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7744442:1
position: 7744442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7745620-7745706:1:exon

position:7745620:1
position: 7745620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7745706:1
position: 7745706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7748165-7748239:1:exon

position:7748165:1
position: 7748165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7748239:1
position: 7748239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7748326-7748429:1:exon

position:7748326:1
position: 7748326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7748429:1
position: 7748429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7751229-7753296:1:exon

position:7751229:1
position: 7751229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tbc1d9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Tbc1d9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 9
translation: MWVNPEEVLLANALWITERANPYFILQRRKGHGGDGGGGGGLAGLLVGTLDVVLDSSARVAPYRILYQTPDSLVYWTIACGGSRKEVTEHWEWLEQNLLQTLSIFENENDVTTFVRGKIQGIIAEYNKINDVKEDEDTEKFKEAIVKFHRLFGMPEEEKLVNYYSCSYWKGKVPRQGWVYLSINHLCFSSFLMGREAKLVIRWVDITQLEKNATLLLPDVIKVSTRSSEHFFSVFLNINETFKLMEQLANIAMRQLLDNEGFEQDRSLPKLKKKSPKKVSALKRDLDARAKSERYRALFRLPKDEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEENLCSLIIPLREVTIVEKADSCSVLPSPLSISTRNRMTFLFANLKDRDFLVQRISDFLQQTTSRIYSDKEFSGSCNSSDDEVYSRPSSLVSSSPQRSTSSDADGERPFNLNGNSVPTATQTLMTMYRRRSPEEFNPKLAKEFLKEQAWKIHFAEYGQGICMYRTEKTRELVLKGIPESMRGELWLLLSGAINEKATHPGYYEDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYCQAMNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELARDYVPQLYDCMQDLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALAVLDANVDKLLNCKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLSDDVGPYPAVDIFRLIGTSYEKFGTIRADLIEQMRFKQRLKVIQTLEDTTKRNVVRTIVTETSFTIDELEELYALFKAEHLTSCYWGGSSNALDRHDPSLPYLEQYRIDFEQFKGMFLQLFPWACGTHSDVLASRLFQLLDENGDSLINFREFVSGLSAACHGDLTEKLKLLYKMHVLPEPSCDQDEPDSAFEATQYFFEDITPECTHVVGLDSRGKQSADDGFITVSLKQDRGKRANSQENRNYLKLWTAENKSKSKTAKDLPKLNQGQFIELCKTMYNMFSEDPNEQELYHATAAVTSLLLEIGEVGKFFITQPAKEDAVPGPPCGQAIPGMLFPKKGSSQSYVVESAEPLAASLAVDSEEHSLGGQMEDIKLEDSSPRDNGACSSMLISDDDTKDDSSMSSYSVLSAGSHEEDKLHCEDIGEDTVLVRSSQGRATLPRSSSLDRDWAITFEQFLASLLTEPALVKYFDKPVCMMARVTSAKNIRMMGKPLTSASDYEISALSG
SIO_010081: Tbc1d9
subclass of: SO_0000673
so part of: Tbc1d9
location: join(7649632..7649761,7694323..7694433,7705372..7705490,7714539..7714767,7715169..7715430,7717541..7717748,7719444..7719650,7721161..7721331,7722210..7722360,7729097..7729311,7733217..7733334,7734171..7734456,7735449..7735578,7738692..7738790,7738986..7739054,7740616..7740856,7744377..7744442,7745620..7745706,7748165..7748239,7748326..7748429,7751229..7751945)
location: region:7649632-7751945:1
so has part: feature:7649632-7649761:1:exon
so has part: feature:7694323-7694433:1:exon
so has part: feature:7705372-7705490:1:exon
so has part: feature:7714539-7714767:1:exon
so has part: feature:7715169-7715430:1:exon
so has part: feature:7717541-7717748:1:exon
so has part: feature:7719444-7719650:1:exon
so has part: feature:7721161-7721331:1:exon
so has part: feature:7722210-7722360:1:exon
so has part: feature:7729097-7729311:1:exon
so has part: feature:7733217-7733334:1:exon
so has part: feature:7734171-7734456:1:exon
so has part: feature:7735449-7735578:1:exon
so has part: feature:7738692-7738790:1:exon
so has part: feature:7738986-7739054:1:exon
so has part: feature:7740616-7740856:1:exon
so has part: feature:7744377-7744442:1:exon
so has part: feature:7745620-7745706:1:exon
so has part: feature:7748165-7748239:1:exon
so has part: feature:7748326-7748429:1:exon
so has part: feature:7751229-7751945:1:exon

XP_021075867.1
type: Protein
SIO_000068: ncbiprotein

position:7649632:1
position: 7649632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7751945:1
position: 7751945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7649632-7649761:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7694323-7694433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7705372-7705490:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7714539-7714767:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7715169-7715430:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7717541-7717748:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7719444-7719650:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7721161-7721331:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7722210-7722360:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7729097-7729311:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7733217-7733334:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7734171-7734456:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7735449-7735578:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7738692-7738790:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7738986-7739054:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7740616-7740856:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7744377-7744442:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7745620-7745706:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7748165-7748239:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7748326-7748429:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7751229-7751945:1:exon

Ucp1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Ucp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7771242..7779305
location: region:7771242-7779305:1
so has part: feature:7771242-7779305:1:exon
subclass of: SO_0000010

110337649
type: Gene
SIO_000068: ncbigene

position:7771242:1
position: 7771242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7779305:1
position: 7779305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7771242-7779305:1:exon

Ucp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ucp1
product: uncoupling protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021220676.1
SIO_010081: Ucp1
subclass of: SO_0000673
so part of: Ucp1
location: join(7771242..7771588,7772329..7772527,7774903..7775103,7775197..7775298,7776333..7776513,7779110..7779305)
location: region:7771242-7779305:1
so has part: feature:7771242-7771588:1:exon
so has part: feature:7772329-7772527:1:exon
so has part: feature:7774903-7775103:1:exon
so has part: feature:7775197-7775298:1:exon
so has part: feature:7776333-7776513:1:exon
so has part: feature:7779110-7779305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7771242-7771588:1:exon

position:7771588:1
position: 7771588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7772329-7772527:1:exon

position:7772329:1
position: 7772329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7772527:1
position: 7772527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7774903-7775103:1:exon

position:7774903:1
position: 7774903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7775103:1
position: 7775103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7775197-7775298:1:exon

position:7775197:1
position: 7775197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7775298:1
position: 7775298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7776333-7776513:1:exon

position:7776333:1
position: 7776333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7776513:1
position: 7776513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7779110-7779305:1:exon

position:7779110:1
position: 7779110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ucp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ucp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial brown fat uncoupling protein 1
translation: MVSPTTSEVQPTMGVKIFSAGVSACLADIITFPLDTAKVRLQIQGEGQASSTIRYKGVLGTITTLAKTEGLPKLYSGLPAGIQRQISFASLRIGLYDSVQEYFSSGTETPASLGNKISAGLMTGGVAVFIGQPTEVVKVRMQAQSHLHGIKPRYTGTYNAYRVIATTESLSTLWKGTTPNLMRNVIINCTELVTYDLMKGALVNNKILADDVPCHLLSALVAGFCTTLLASPVDVVKTRFINSLPGQYPSVPNCAMTMYRKEGPTAFFKGFVASFLRLGSWNVIMFVCFEQLKKELMKSRQTVDCST
SIO_010081: Ucp1
subclass of: SO_0000673
so part of: Ucp1
location: join(7771463..7771588,7772329..7772527,7774903..7775103,7775197..7775298,7776333..7776513,7779110..7779224)
location: region:7771463-7779224:1
so has part: feature:7771463-7771588:1:exon
so has part: feature:7772329-7772527:1:exon
so has part: feature:7774903-7775103:1:exon
so has part: feature:7775197-7775298:1:exon
so has part: feature:7776333-7776513:1:exon
so has part: feature:7779110-7779224:1:exon

XP_021076335.1
type: Protein
SIO_000068: ncbiprotein

position:7771463:1
position: 7771463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7779224:1
position: 7779224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7771463-7771588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7772329-7772527:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7774903-7775103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7775197-7775298:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7776333-7776513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7779110-7779224:1:exon

Elmod2
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Elmod2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7793041..7814839)
location: region:7793041-7814839:-1
so has part: feature:7793041-7814839:-1:exon
subclass of: SO_0000010

110337379
type: Gene
SIO_000068: ncbigene

position:7793041:-1
position: 7793041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7814839:-1
position: 7814839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7793041-7814839:-1:exon

Elmod2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Elmod2
product: ELMO domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021220255.1
SIO_010081: Elmod2
subclass of: SO_0000673
so part of: Elmod2
location: complement(join(7793041..7796448,7796771..7796904,7797713..7797781,7801266..7801399,7803865..7803994,7805076..7805173,7811777..7811805,7813485..7813632,7814703..7814839))
location: region:7793041-7814839:-1
so has part: feature:7814703-7814839:-1:exon
so has part: feature:7813485-7813632:-1:exon
so has part: feature:7811777-7811805:-1:exon
so has part: feature:7805076-7805173:-1:exon
so has part: feature:7803865-7803994:-1:exon
so has part: feature:7801266-7801399:-1:exon
so has part: feature:7797713-7797781:-1:exon
so has part: feature:7796771-7796904:-1:exon
so has part: feature:7793041-7796448:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7814703-7814839:-1:exon

position:7814703:-1
position: 7814703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7813485-7813632:-1:exon

position:7813485:-1
position: 7813485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7813632:-1
position: 7813632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7811777-7811805:-1:exon

position:7811777:-1
position: 7811777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7811805:-1
position: 7811805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7805076-7805173:-1:exon

position:7805076:-1
position: 7805076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7805173:-1
position: 7805173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7803865-7803994:-1:exon

position:7803865:-1
position: 7803865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7803994:-1
position: 7803994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7801266-7801399:-1:exon

position:7801266:-1
position: 7801266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7801399:-1
position: 7801399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7797713-7797781:-1:exon

position:7797713:-1
position: 7797713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7797781:-1
position: 7797781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7796771-7796904:-1:exon

position:7796771:-1
position: 7796771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7796904:-1
position: 7796904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7793041-7796448:-1:exon

position:7796448:-1
position: 7796448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Elmod2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Elmod2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ELMO domain-containing protein 2
translation: MFLSLWEFFYGNFFRFWMKWVLRQMTGKCELQRIFDTYGGAQRTYRIENSLTYSKNKVLQNATRVAESELDRCIVNIMKEKNICPEKDTSFQICMRTCLLQITGYKQLYHEVENVRKKPYDSANAHHEKMLLKLWSLLMPTKKLTARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKLHLYNFVPGVPTMEHFHQFYCYLVYEFDKFWLEEEPESIMYFNLYREKFHERIKGLLMDYNAVLTLKI
SIO_010081: Elmod2
subclass of: SO_0000673
so part of: Elmod2
location: complement(join(7796303..7796448,7796771..7796904,7797713..7797781,7801266..7801399,7803865..7803994,7805076..7805173,7811777..7811805,7813485..7813626))
location: region:7796303-7813626:-1
so has part: feature:7813485-7813626:-1:exon
so has part: feature:7811777-7811805:-1:exon
so has part: feature:7805076-7805173:-1:exon
so has part: feature:7803865-7803994:-1:exon
so has part: feature:7801266-7801399:-1:exon
so has part: feature:7797713-7797781:-1:exon
so has part: feature:7796771-7796904:-1:exon
so has part: feature:7796303-7796448:-1:exon

XP_021075914.1
type: Protein
SIO_000068: ncbiprotein

position:7796303:-1
position: 7796303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7813626:-1
position: 7813626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7813485-7813626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7811777-7811805:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7805076-7805173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7803865-7803994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7801266-7801399:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7797713-7797781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7796771-7796904:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7796303-7796448:-1:exon

Mgat4d
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Mgat4d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7826277..7856218
location: region:7826277-7856218:1
so has part: feature:7826277-7856218:1:exon
subclass of: SO_0000010

110337626
type: Gene
SIO_000068: ncbigene

position:7826277:1
position: 7826277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7856218:1
position: 7856218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7826277-7856218:1:exon

Mgat4d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Mgat4d
product: MGAT4 family member D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021220638.2
SIO_010081: Mgat4d
subclass of: SO_0000673
so part of: Mgat4d
location: join(7826277..7826385,7835561..7835716,7836892..7837029,7839178..7839311,7841026..7841072,7843325..7843426,7846251..7846326,7847833..7847947,7848688..7848818,7849912..7850019,7856046..7856218)
location: region:7826277-7856218:1
so has part: feature:7826277-7826385:1:exon
so has part: feature:7835561-7835716:1:exon
so has part: feature:7836892-7837029:1:exon
so has part: feature:7839178-7839311:1:exon
so has part: feature:7841026-7841072:1:exon
so has part: feature:7843325-7843426:1:exon
so has part: feature:7846251-7846326:1:exon
so has part: feature:7847833-7847947:1:exon
so has part: feature:7848688-7848818:1:exon
so has part: feature:7849912-7850019:1:exon
so has part: feature:7856046-7856218:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7826277-7826385:1:exon

position:7826385:1
position: 7826385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7835561-7835716:1:exon

position:7835561:1
position: 7835561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7835716:1
position: 7835716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7836892-7837029:1:exon

position:7836892:1
position: 7836892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7837029:1
position: 7837029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7839178-7839311:1:exon

position:7839178:1
position: 7839178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7839311:1
position: 7839311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7841026-7841072:1:exon

position:7841026:1
position: 7841026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7841072:1
position: 7841072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7843325-7843426:1:exon

position:7843325:1
position: 7843325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7843426:1
position: 7843426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7846251-7846326:1:exon

position:7846251:1
position: 7846251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7846326:1
position: 7846326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7847833-7847947:1:exon

position:7847833:1
position: 7847833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7847947:1
position: 7847947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7848688-7848818:1:exon

position:7848688:1
position: 7848688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7848818:1
position: 7848818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7849912-7850019:1:exon

position:7849912:1
position: 7849912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7850019:1
position: 7850019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7856046-7856218:1:exon

position:7856046:1
position: 7856046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mgat4d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Mgat4d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein MGAT4D
translation: MMKAKNVYLLFAFLAVLLIGFSCFCVSRMNQTNNQLMNCRNHVLEFKEIMLRLKNKSENHHQNLIQVLYQMKHKAAHTRASGNSLEKKGNILSQHETLPNQFEILKYFLPHLRTAGKLYPAIATSKGRAGVSFALGISTINRRNHTYLKQTLTSVLSRMTPEEEEDSVVIVSVADTDESYLKSVVRMVKTKFRKQVQSGVLEVISIPTLFYPQTLLDKKMKDSENWQVKQVLDFCILMLYAQPKATYYLQLEDDIVAKKMYFTKMKDFVNSLTSKNWFFIEFSVLGFIGKLFRSKDLTNFVHFFLMFYETKPIDILLDDIFLLRVCSQGEPVRRCLQRKKGFRIQYRPSLFQHVGTQSSFPGREQHLKDIYY
SIO_010081: Mgat4d
subclass of: SO_0000673
so part of: Mgat4d
location: join(7826289..7826385,7835561..7835716,7836892..7837029,7839178..7839311,7841026..7841072,7843325..7843426,7846251..7846326,7847833..7847947,7848688..7848818,7849912..7850019,7856046..7856060)
location: region:7826289-7856060:1
so has part: feature:7826289-7826385:1:exon
so has part: feature:7835561-7835716:1:exon
so has part: feature:7836892-7837029:1:exon
so has part: feature:7839178-7839311:1:exon
so has part: feature:7841026-7841072:1:exon
so has part: feature:7843325-7843426:1:exon
so has part: feature:7846251-7846326:1:exon
so has part: feature:7847833-7847947:1:exon
so has part: feature:7848688-7848818:1:exon
so has part: feature:7849912-7850019:1:exon
so has part: feature:7856046-7856060:1:exon

XP_021076297.1
type: Protein
SIO_000068: ncbiprotein

position:7826289:1
position: 7826289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7856060:1
position: 7856060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7826289-7826385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7835561-7835716:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7836892-7837029:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7839178-7839311:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7841026-7841072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7843325-7843426:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7846251-7846326:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7847833-7847947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7848688-7848818:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7849912-7850019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7856046-7856060:1:exon

LOC110337627
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337627
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7833927..7834427
location: region:7833927-7834427:1
so has part: feature:7833927-7834427:1:exon

110337627
type: Gene
SIO_000068: ncbigene

position:7833927:1
position: 7833927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7834427:1
position: 7834427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7833927-7834427:1:exon

LOC110337627
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337627
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC110337627
subclass of: SO_0000673
so part of: LOC110337627
location: 7833927..7834427
location: region:7833927-7834427:1
so has part: feature:7833927-7834427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7833927-7834427:1:exon

Clgn
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Clgn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7869142..7898595
location: region:7869142-7898595:1
so has part: feature:7869142-7898595:1:exon
subclass of: SO_0000010

110337552
type: Gene
SIO_000068: ncbigene

position:7869142:1
position: 7869142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7898595:1
position: 7898595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7869142-7898595:1:exon

Clgn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Clgn
product: calmegin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532752.1
SIO_010081: Clgn
subclass of: SO_0000673
so part of: Clgn
location: join(7869142..7869285,7870652..7870728,7871308..7871366,7873818..7873959,7881596..7881677,7882911..7883103,7883798..7883987,7892321..7892434,7892538..7892688,7894105..7894320,7894922..7895047,7895366..7895525,7897102..7897202,7898087..7898366)
location: region:7869142-7898366:1
so has part: feature:7869142-7869285:1:exon
so has part: feature:7870652-7870728:1:exon
so has part: feature:7871308-7871366:1:exon
so has part: feature:7873818-7873959:1:exon
so has part: feature:7881596-7881677:1:exon
so has part: feature:7882911-7883103:1:exon
so has part: feature:7883798-7883987:1:exon
so has part: feature:7892321-7892434:1:exon
so has part: feature:7892538-7892688:1:exon
so has part: feature:7894105-7894320:1:exon
so has part: feature:7894922-7895047:1:exon
so has part: feature:7895366-7895525:1:exon
so has part: feature:7897102-7897202:1:exon
so has part: feature:7898087-7898366:1:exon

position:7898366:1
position: 7898366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7869142-7869285:1:exon

position:7869285:1
position: 7869285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7870652-7870728:1:exon

position:7870652:1
position: 7870652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7870728:1
position: 7870728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7871308-7871366:1:exon

position:7871308:1
position: 7871308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7871366:1
position: 7871366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7873818-7873959:1:exon

position:7873818:1
position: 7873818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7873959:1
position: 7873959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7881596-7881677:1:exon

position:7881596:1
position: 7881596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7881677:1
position: 7881677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7882911-7883103:1:exon

position:7882911:1
position: 7882911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7883103:1
position: 7883103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7883798-7883987:1:exon

position:7883798:1
position: 7883798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7883987:1
position: 7883987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7892321-7892434:1:exon

position:7892321:1
position: 7892321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7892434:1
position: 7892434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7892538-7892688:1:exon

position:7892538:1
position: 7892538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7892688:1
position: 7892688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7894105-7894320:1:exon

position:7894105:1
position: 7894105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7894320:1
position: 7894320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7894922-7895047:1:exon

position:7894922:1
position: 7894922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7895047:1
position: 7895047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7895366-7895525:1:exon

position:7895366:1
position: 7895366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7895525:1
position: 7895525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7897102-7897202:1:exon

position:7897102:1
position: 7897102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7897202:1
position: 7897202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7898087-7898366:1:exon

position:7898087:1
position: 7898087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Clgn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Clgn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmegin isoform X1
translation: MRFQGVGLCLGLLLIMVNADFMDDGVEVKDFSENPEESNNKDEPSSGTFKYKTPQPIGEVYFTETFDSGNLAGWVLSKAKKDDMDSEISIYDGRWEIEELKENQVPGDRGLVLKSKAKHHAIAALLKKPFIFADKPLIVQYEVNFQDGIDCGGAYIKLLADAGDLILENFYDKTSYTIMFGPDKCGEDYKLHLIFRHKHPKTGVFEEKHAKPPDVDLKEFFTDRRTHLYTLVMNPDDTFKILIDQKVVNQGTLLDDVVPPINPPREIDDPNDKKPEEWDDRAKIPDPTAVKPEDWDENEPAQIEDSNAVKPDGWLDDEPKFIPNPKAEKPEDWSDDMDGEWEAPHIPNPACQIGCGEWKPPMIDNPKYKGIWRPPMINNPNYQGIWSPQKIPNPDYFEDDHPFLLTSFSALGLELWSMTPDIYFDNFIICSEKAVADQWATDGWELKIMVANANEPGVLQQLATAAEERPWLWLVCLVMAGVPIALVTSFCWPRKVKKKYEDMEPKKTDLCKLQSKAALEQEAEEEKAPEKPEDMQENKPSEMEVDTVGKEVIGEPEEKSEEDGETIEGQEEVSRLSKSGSEDEMKDADENTGSGDAPVKSLRKRKVRKD
SIO_010081: Clgn
subclass of: SO_0000673
so part of: Clgn
location: join(7869145..7869285,7870652..7870728,7871308..7871366,7873818..7873959,7881596..7881677,7882911..7883103,7883798..7883987,7892321..7892434,7892538..7892688,7894105..7894320,7894922..7895047,7895366..7895525,7897102..7897202,7898087..7898167)
location: region:7869145-7898167:1
so has part: feature:7869145-7869285:1:exon
so has part: feature:7870652-7870728:1:exon
so has part: feature:7871308-7871366:1:exon
so has part: feature:7873818-7873959:1:exon
so has part: feature:7881596-7881677:1:exon
so has part: feature:7882911-7883103:1:exon
so has part: feature:7883798-7883987:1:exon
so has part: feature:7892321-7892434:1:exon
so has part: feature:7892538-7892688:1:exon
so has part: feature:7894105-7894320:1:exon
so has part: feature:7894922-7895047:1:exon
so has part: feature:7895366-7895525:1:exon
so has part: feature:7897102-7897202:1:exon
so has part: feature:7898087-7898167:1:exon

XP_029388612.1
type: Protein
SIO_000068: ncbiprotein

position:7869145:1
position: 7869145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7898167:1
position: 7898167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7869145-7869285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7870652-7870728:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7871308-7871366:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7873818-7873959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7881596-7881677:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7882911-7883103:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7883798-7883987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7892321-7892434:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7892538-7892688:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7894105-7894320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7894922-7895047:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7895366-7895525:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7897102-7897202:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7898087-7898167:1:exon

Clgn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Clgn
product: calmegin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532753.1
SIO_010081: Clgn
subclass of: SO_0000673
so part of: Clgn
location: join(7869206..7869301,7870652..7870728,7871308..7871366,7873818..7873959,7881596..7881677,7882911..7883103,7883798..7883987,7892321..7892434,7892538..7892688,7894105..7894320,7894922..7895047,7895366..7895525,7897102..7897202,7898087..7898595)
location: region:7869206-7898595:1
so has part: feature:7869206-7869301:1:exon
so has part: feature:7870652-7870728:1:exon
so has part: feature:7871308-7871366:1:exon
so has part: feature:7873818-7873959:1:exon
so has part: feature:7881596-7881677:1:exon
so has part: feature:7882911-7883103:1:exon
so has part: feature:7883798-7883987:1:exon
so has part: feature:7892321-7892434:1:exon
so has part: feature:7892538-7892688:1:exon
so has part: feature:7894105-7894320:1:exon
so has part: feature:7894922-7895047:1:exon
so has part: feature:7895366-7895525:1:exon
so has part: feature:7897102-7897202:1:exon
so has part: feature:7898087-7898595:1:exon

position:7869206:1
position: 7869206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7869206-7869301:1:exon

position:7869301:1
position: 7869301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7870652-7870728:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7871308-7871366:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7873818-7873959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7881596-7881677:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7882911-7883103:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7883798-7883987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7892321-7892434:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7892538-7892688:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7894105-7894320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7894922-7895047:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7895366-7895525:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7897102-7897202:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7898087-7898595:1:exon

Clgn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Clgn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmegin isoform X2
translation: MDSEISIYDGRWEIEELKENQVPGDRGLVLKSKAKHHAIAALLKKPFIFADKPLIVQYEVNFQDGIDCGGAYIKLLADAGDLILENFYDKTSYTIMFGPDKCGEDYKLHLIFRHKHPKTGVFEEKHAKPPDVDLKEFFTDRRTHLYTLVMNPDDTFKILIDQKVVNQGTLLDDVVPPINPPREIDDPNDKKPEEWDDRAKIPDPTAVKPEDWDENEPAQIEDSNAVKPDGWLDDEPKFIPNPKAEKPEDWSDDMDGEWEAPHIPNPACQIGCGEWKPPMIDNPKYKGIWRPPMINNPNYQGIWSPQKIPNPDYFEDDHPFLLTSFSALGLELWSMTPDIYFDNFIICSEKAVADQWATDGWELKIMVANANEPGVLQQLATAAEERPWLWLVCLVMAGVPIALVTSFCWPRKVKKKYEDMEPKKTDLCKLQSKAALEQEAEEEKAPEKPEDMQENKPSEMEVDTVGKEVIGEPEEKSEEDGETIEGQEEVSRLSKSGSEDEMKDADENTGSGDAPVKSLRKRKVRKD
SIO_010081: Clgn
subclass of: SO_0000673
so part of: Clgn
location: join(7871339..7871366,7873818..7873959,7881596..7881677,7882911..7883103,7883798..7883987,7892321..7892434,7892538..7892688,7894105..7894320,7894922..7895047,7895366..7895525,7897102..7897202,7898087..7898167)
location: region:7871339-7898167:1
so has part: feature:7871339-7871366:1:exon
so has part: feature:7873818-7873959:1:exon
so has part: feature:7881596-7881677:1:exon
so has part: feature:7882911-7883103:1:exon
so has part: feature:7883798-7883987:1:exon
so has part: feature:7892321-7892434:1:exon
so has part: feature:7892538-7892688:1:exon
so has part: feature:7894105-7894320:1:exon
so has part: feature:7894922-7895047:1:exon
so has part: feature:7895366-7895525:1:exon
so has part: feature:7897102-7897202:1:exon
so has part: feature:7898087-7898167:1:exon

XP_029388613.1
type: Protein
SIO_000068: ncbiprotein

position:7871339:1
position: 7871339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7871339-7871366:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7873818-7873959:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7881596-7881677:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7882911-7883103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7883798-7883987:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7892321-7892434:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7892538-7892688:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7894105-7894320:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7894922-7895047:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7895366-7895525:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7897102-7897202:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7898087-7898167:1:exon

Scoc
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Scoc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7905253..7926700)
location: region:7905253-7926700:-1
so has part: feature:7905253-7926700:-1:exon
subclass of: SO_0000010

110337394
type: Gene
SIO_000068: ncbigene

position:7905253:-1
position: 7905253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7926700:-1
position: 7926700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7905253-7926700:-1:exon

Scoc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Scoc
product: short coiled-coil protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021220282.2
SIO_010081: Scoc
subclass of: SO_0000673
so part of: Scoc
location: complement(join(7905253..7906807,7908423..7908506,7908855..7908926,7926571..7926700))
location: region:7905253-7926700:-1
so has part: feature:7926571-7926700:-1:exon
so has part: feature:7908855-7908926:-1:exon
so has part: feature:7908423-7908506:-1:exon
so has part: feature:7905253-7906807:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7926571-7926700:-1:exon

position:7926571:-1
position: 7926571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7908855-7908926:-1:exon

position:7908855:-1
position: 7908855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7908926:-1
position: 7908926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7908423-7908506:-1:exon

position:7908423:-1
position: 7908423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7908506:-1
position: 7908506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7905253-7906807:-1:exon

position:7906807:-1
position: 7906807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Scoc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Scoc
product: short coiled-coil protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029532672.1
SIO_010081: Scoc
subclass of: SO_0000673
so part of: Scoc
location: complement(join(7905253..7906807,7908423..7908503,7908855..7908926,7926571..7926687))
location: region:7905253-7926687:-1
so has part: feature:7926571-7926687:-1:exon
so has part: feature:7908855-7908926:-1:exon
so has part: feature:7908423-7908503:-1:exon
so has part: feature:7905253-7906807:-1:exon

position:7926687:-1
position: 7926687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7926571-7926687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7908855-7908926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7908423-7908503:-1:exon

position:7908503:-1
position: 7908503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7905253-7906807:-1:exon

Scoc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Scoc
product: short coiled-coil protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021220284.2
SIO_010081: Scoc
subclass of: SO_0000673
so part of: Scoc
location: complement(join(7905253..7906807,7908423..7908503,7908855..7908926,7913186..7913421))
location: region:7905253-7913421:-1
so has part: feature:7913186-7913421:-1:exon
so has part: feature:7908855-7908926:-1:exon
so has part: feature:7908423-7908503:-1:exon
so has part: feature:7905253-7906807:-1:exon

position:7913421:-1
position: 7913421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7913186-7913421:-1:exon

position:7913186:-1
position: 7913186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7908855-7908926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7908423-7908503:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7905253-7906807:-1:exon

Scoc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Scoc
product: short coiled-coil protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 10 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021220283.2
SIO_010081: Scoc
subclass of: SO_0000673
so part of: Scoc
location: complement(join(7905253..7906807,7908423..7908506,7908855..7908926,7913186..7913421))
location: region:7905253-7913421:-1
so has part: feature:7913186-7913421:-1:exon
so has part: feature:7908855-7908926:-1:exon
so has part: feature:7908423-7908506:-1:exon
so has part: feature:7905253-7906807:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7913186-7913421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7908855-7908926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7908423-7908506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7905253-7906807:-1:exon

Scoc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Scoc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short coiled-coil protein isoform X2
translation: MNKMDRLSTGEEEDSMFTSISLADDTDRSLKGLRSRAESLLPKMMNADMDVDAENQVELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK
SIO_010081: Scoc
subclass of: SO_0000673
so part of: Scoc
location: complement(join(7906665..7906807,7908423..7908503,7908855..7908926,7926571..7926649))
location: region:7906665-7926649:-1
so has part: feature:7926571-7926649:-1:exon
so has part: feature:7908855-7908926:-1:exon
so has part: feature:7908423-7908503:-1:exon
so has part: feature:7906665-7906807:-1:exon

XP_029388532.1
type: Protein
SIO_000068: ncbiprotein

position:7906665:-1
position: 7906665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7926649:-1
position: 7926649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7926571-7926649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7908855-7908926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7908423-7908503:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7906665-7906807:-1:exon

Scoc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Scoc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short coiled-coil protein isoform X1
translation: MNKMDRLSTGEEEDSMFTSISLADDTDRSLKGLRSRAESLLPKMMNADMDAVDAENQVELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK
SIO_010081: Scoc
subclass of: SO_0000673
so part of: Scoc
location: complement(join(7906665..7906807,7908423..7908506,7908855..7908926,7926571..7926649))
location: region:7906665-7926649:-1
so has part: feature:7926571-7926649:-1:exon
so has part: feature:7908855-7908926:-1:exon
so has part: feature:7908423-7908506:-1:exon
so has part: feature:7906665-7906807:-1:exon

XP_021075941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7926571-7926649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7908855-7908926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7908423-7908506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7906665-7906807:-1:exon

Scoc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Scoc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short coiled-coil protein isoform X4
translation: MMNADMDVDAENQVELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK
SIO_010081: Scoc
subclass of: SO_0000673
so part of: Scoc
location: complement(join(7906665..7906807,7908423..7908503,7908855..7908876))
location: region:7906665-7908876:-1
so has part: feature:7908855-7908876:-1:exon
so has part: feature:7908423-7908503:-1:exon
so has part: feature:7906665-7906807:-1:exon

XP_021075943.1
type: Protein
SIO_000068: ncbiprotein

position:7908876:-1
position: 7908876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7908855-7908876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7908423-7908503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7906665-7906807:-1:exon

Scoc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Scoc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short coiled-coil protein isoform X3
translation: MMNADMDAVDAENQVELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK
SIO_010081: Scoc
subclass of: SO_0000673
so part of: Scoc
location: complement(join(7906665..7906807,7908423..7908506,7908855..7908876))
location: region:7906665-7908876:-1
so has part: feature:7908855-7908876:-1:exon
so has part: feature:7908423-7908506:-1:exon
so has part: feature:7906665-7906807:-1:exon

XP_021075942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7908855-7908876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7908423-7908506:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7906665-7906807:-1:exon

LOC110337743
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337743
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8007874..8008957
location: region:8007874-8008957:1
so has part: feature:8007874-8008957:1:exon
subclass of: SO_0000010

110337743
type: Gene
SIO_000068: ncbigene

position:8007874:1
position: 8007874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8008957:1
position: 8008957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8007874-8008957:1:exon

LOC110337743
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: LOC110337743
product: olfactory receptor 10K2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 Proteins
transcript id: XM_021220803.1
SIO_010081: LOC110337743
subclass of: SO_0000673
so part of: LOC110337743
location: 8007874..8008957
location: region:8007874-8008957:1
so has part: feature:8007874-8008957:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8007874-8008957:1:exon

LOC110337743
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: LOC110337743
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 10K2-like
translation: MECVNDTVVREFVFLGFSSLAELQLLLFAVFLSLYLFTLSTNALIVSTIVLDRALHTPMYFFLSVLSCSETCYTFVIVPKMLMDLLARKKSISFLGCAIQMFTFLFLGCSHSFLLAAMGYDRYVAICHPLRYTVLMGHRVCVGLVAAACVCGFTVAQIITSLVFRLPFRSSNQLHHFFCDISPVLQLASHHPHSTQITIFLLCALVLVIPLLLILVSYIHIISAILQFPSTLGRYKAFSTCASHLIVVIVHYGCASFIYLRPKSSYSSSQDALISVSYTILTPLFNPVIYSLRNKDFKSALHRVIGRTVTLRQH
SIO_010081: LOC110337743
subclass of: SO_0000673
so part of: LOC110337743
location: 8007920..8008864
location: region:8007920-8008864:1
so has part: feature:8007920-8008864:1:exon

XP_021076462.1
type: Protein
SIO_000068: ncbiprotein

position:8007920:1
position: 8007920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8008864:1
position: 8008864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8007920-8008864:1:exon

Ndufb7
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Ndufb7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8028906..8033601
location: region:8028906-8033601:1
so has part: feature:8028906-8033601:1:exon
subclass of: SO_0000010

110337650
type: Gene
SIO_000068: ncbigene

position:8028906:1
position: 8028906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8033601:1
position: 8033601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8028906-8033601:1:exon

Ndufb7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ndufb7
product: NADH:ubiquinone oxidoreductase subunit B7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021220677.2
SIO_010081: Ndufb7
subclass of: SO_0000673
so part of: Ndufb7
location: join(8028906..8029089,8032914..8033082,8033410..8033601)
location: region:8028906-8033601:1
so has part: feature:8028906-8029089:1:exon
so has part: feature:8032914-8033082:1:exon
so has part: feature:8033410-8033601:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8028906-8029089:1:exon

position:8029089:1
position: 8029089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8032914-8033082:1:exon

position:8032914:1
position: 8032914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8033082:1
position: 8033082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8033410-8033601:1:exon

position:8033410:1
position: 8033410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ndufb7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ndufb7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
translation: MGAHLTRRYLWDASVEPDPDKIPSFPPDLGFPERKERVMVATQQEMMDAQLTLQQRDYCAHYLIRLLKCKRDSFPNFLAXKHEQHDWDYCEHLDYVKRMKEFERERRLLQRKKRRALKEARVAQGQGEGEVGPEVAL
SIO_010081: Ndufb7
subclass of: SO_0000673
so part of: Ndufb7
location: join(8028978..8029089,8032914..8033082,8033410..8033542)
location: region:8028978-8033542:1
so has part: feature:8028978-8029089:1:exon
so has part: feature:8032914-8033082:1:exon
so has part: feature:8033410-8033542:1:exon

XP_021076336.1
type: Protein
SIO_000068: ncbiprotein

position:8028978:1
position: 8028978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8033542:1
position: 8033542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8028978-8029089:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8032914-8033082:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8033410-8033542:1:exon

Tecr
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Tecr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8033673..8056774)
location: region:8033673-8056774:-1
so has part: feature:8033673-8056774:-1:exon
subclass of: SO_0000010

110337246
type: Gene
SIO_000068: ncbigene

position:8033673:-1
position: 8033673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8056774:-1
position: 8056774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8033673-8056774:-1:exon

Tecr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Tecr
product: trans-2,3-enoyl-CoA reductase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021220036.1
SIO_010081: Tecr
subclass of: SO_0000673
so part of: Tecr
location: complement(join(8033673..8033908,8033986..8034031,8034203..8034291,8034365..8034422,8034516..8034559,8034652..8034724,8034805..8034910,8034992..8035107,8035184..8035287,8035836..8035887,8036442..8036492,8056625..8056774))
location: region:8033673-8056774:-1
so has part: feature:8056625-8056774:-1:exon
so has part: feature:8036442-8036492:-1:exon
so has part: feature:8035836-8035887:-1:exon
so has part: feature:8035184-8035287:-1:exon
so has part: feature:8034992-8035107:-1:exon
so has part: feature:8034805-8034910:-1:exon
so has part: feature:8034652-8034724:-1:exon
so has part: feature:8034516-8034559:-1:exon
so has part: feature:8034365-8034422:-1:exon
so has part: feature:8034203-8034291:-1:exon
so has part: feature:8033986-8034031:-1:exon
so has part: feature:8033673-8033908:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8056625-8056774:-1:exon

position:8056625:-1
position: 8056625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8036442-8036492:-1:exon

position:8036442:-1
position: 8036442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8036492:-1
position: 8036492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8035836-8035887:-1:exon

position:8035836:-1
position: 8035836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8035887:-1
position: 8035887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8035184-8035287:-1:exon

position:8035184:-1
position: 8035184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8035287:-1
position: 8035287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8034992-8035107:-1:exon

position:8034992:-1
position: 8034992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8035107:-1
position: 8035107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8034805-8034910:-1:exon

position:8034805:-1
position: 8034805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8034910:-1
position: 8034910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8034652-8034724:-1:exon

position:8034652:-1
position: 8034652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8034724:-1
position: 8034724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8034516-8034559:-1:exon

position:8034516:-1
position: 8034516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8034559:-1
position: 8034559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8034365-8034422:-1:exon

position:8034365:-1
position: 8034365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8034422:-1
position: 8034422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8034203-8034291:-1:exon

position:8034203:-1
position: 8034203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8034291:-1
position: 8034291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8033986-8034031:-1:exon

position:8033986:-1
position: 8033986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8034031:-1
position: 8034031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8033673-8033908:-1:exon

position:8033908:-1
position: 8033908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tecr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Tecr
product: trans-2,3-enoyl-CoA reductase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 mRNAs, 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021220035.1
SIO_010081: Tecr
subclass of: SO_0000673
so part of: Tecr
location: complement(join(8033673..8033908,8033986..8034031,8034203..8034291,8034365..8034422,8034516..8034559,8034652..8034724,8034805..8034910,8034992..8035107,8035184..8035287,8035375..8035419,8035836..8035887,8036442..8036492,8056625..8056774))
location: region:8033673-8056774:-1
so has part: feature:8056625-8056774:-1:exon
so has part: feature:8036442-8036492:-1:exon
so has part: feature:8035836-8035887:-1:exon
so has part: feature:8035375-8035419:-1:exon
so has part: feature:8035184-8035287:-1:exon
so has part: feature:8034992-8035107:-1:exon
so has part: feature:8034805-8034910:-1:exon
so has part: feature:8034652-8034724:-1:exon
so has part: feature:8034516-8034559:-1:exon
so has part: feature:8034365-8034422:-1:exon
so has part: feature:8034203-8034291:-1:exon
so has part: feature:8033986-8034031:-1:exon
so has part: feature:8033673-8033908:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8056625-8056774:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8036442-8036492:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8035836-8035887:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8035375-8035419:-1:exon

position:8035375:-1
position: 8035375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8035419:-1
position: 8035419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8035184-8035287:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8034992-8035107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8034805-8034910:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8034652-8034724:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8034516-8034559:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8034365-8034422:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8034203-8034291:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8033986-8034031:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8033673-8033908:-1:exon

Tecr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Tecr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: very-long-chain enoyl-CoA reductase isoform X2
translation: MKHYEVEIRDAKTREKLCFLDKVEPQATISEIKTLFTKTQGKSLKDEDVLQKLPVGTTATLYFRDLGAQISWVTVFLTEYAGPLFIYLLFYFRVPFIYGRKYDFTSSRHTVVHLACMCHSFHYIKRLLETLFVHRFSHGTMPLRNIFKNCTYYWGFAAWMAYYINHPLYTPPTYGVQQVKLALAVFVICQLGNFSIHMALRDLRPAGSKTRKIPYPTKNPFTWLFLLVSCPNYTYEVGSWIGFAILTQCVPVALFSLVGFTQMTIWAKGKHRSYLKEFRDYPPLRMPIIPFLL
SIO_010081: Tecr
subclass of: SO_0000673
so part of: Tecr
location: complement(join(8033781..8033908,8033986..8034031,8034203..8034291,8034365..8034422,8034516..8034559,8034652..8034724,8034805..8034910,8034992..8035107,8035184..8035287,8035836..8035887,8036442..8036492,8056625..8056639))
location: region:8033781-8056639:-1
so has part: feature:8056625-8056639:-1:exon
so has part: feature:8036442-8036492:-1:exon
so has part: feature:8035836-8035887:-1:exon
so has part: feature:8035184-8035287:-1:exon
so has part: feature:8034992-8035107:-1:exon
so has part: feature:8034805-8034910:-1:exon
so has part: feature:8034652-8034724:-1:exon
so has part: feature:8034516-8034559:-1:exon
so has part: feature:8034365-8034422:-1:exon
so has part: feature:8034203-8034291:-1:exon
so has part: feature:8033986-8034031:-1:exon
so has part: feature:8033781-8033908:-1:exon

XP_021075695.1
type: Protein
SIO_000068: ncbiprotein

position:8033781:-1
position: 8033781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8056639:-1
position: 8056639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8056625-8056639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8036442-8036492:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8035836-8035887:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8035184-8035287:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8034992-8035107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8034805-8034910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8034652-8034724:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8034516-8034559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8034365-8034422:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8034203-8034291:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8033986-8034031:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8033781-8033908:-1:exon

Tecr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Tecr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: very-long-chain enoyl-CoA reductase isoform X1
translation: MKHYEVEIRDAKTREKLCFLDKVEPQATISEIKTLFTKTHPQWYPARQSLRLDPKGKSLKDEDVLQKLPVGTTATLYFRDLGAQISWVTVFLTEYAGPLFIYLLFYFRVPFIYGRKYDFTSSRHTVVHLACMCHSFHYIKRLLETLFVHRFSHGTMPLRNIFKNCTYYWGFAAWMAYYINHPLYTPPTYGVQQVKLALAVFVICQLGNFSIHMALRDLRPAGSKTRKIPYPTKNPFTWLFLLVSCPNYTYEVGSWIGFAILTQCVPVALFSLVGFTQMTIWAKGKHRSYLKEFRDYPPLRMPIIPFLL
SIO_010081: Tecr
subclass of: SO_0000673
so part of: Tecr
location: complement(join(8033781..8033908,8033986..8034031,8034203..8034291,8034365..8034422,8034516..8034559,8034652..8034724,8034805..8034910,8034992..8035107,8035184..8035287,8035375..8035419,8035836..8035887,8036442..8036492,8056625..8056639))
location: region:8033781-8056639:-1
so has part: feature:8056625-8056639:-1:exon
so has part: feature:8036442-8036492:-1:exon
so has part: feature:8035836-8035887:-1:exon
so has part: feature:8035375-8035419:-1:exon
so has part: feature:8035184-8035287:-1:exon
so has part: feature:8034992-8035107:-1:exon
so has part: feature:8034805-8034910:-1:exon
so has part: feature:8034652-8034724:-1:exon
so has part: feature:8034516-8034559:-1:exon
so has part: feature:8034365-8034422:-1:exon
so has part: feature:8034203-8034291:-1:exon
so has part: feature:8033986-8034031:-1:exon
so has part: feature:8033781-8033908:-1:exon

XP_021075694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8056625-8056639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8036442-8036492:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8035836-8035887:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8035375-8035419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8035184-8035287:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8034992-8035107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8034805-8034910:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8034652-8034724:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8034516-8034559:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8034365-8034422:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8034203-8034291:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8033986-8034031:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8033781-8033908:-1:exon

LOC115062697
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115062697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8038036..8048465
location: region:8038036-8048465:1
so has part: feature:8038036-8048465:1:exon
subclass of: SO_0000011

115062697
type: Gene
SIO_000068: ncbigene

position:8038036:1
position: 8038036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8048465:1
position: 8048465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8038036-8048465:1:exon

LOC115062697
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: lncRNA
gene: LOC115062697
product: uncharacterized LOC115062697, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003842634.1
SIO_010081: LOC115062697
subclass of: SO_0000673
so part of: LOC115062697
location: join(8038036..8038324,8045295..8045400,8048335..8048465)
location: region:8038036-8048465:1
so has part: feature:8038036-8038324:1:exon
so has part: feature:8045295-8045400:1:exon
so has part: feature:8048335-8048465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8038036-8038324:1:exon

position:8038324:1
position: 8038324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8045295-8045400:1:exon

position:8045295:1
position: 8045295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8045400:1
position: 8045400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8048335-8048465:1:exon

position:8048335:1
position: 8048335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115062697
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: lncRNA
gene: LOC115062697
product: uncharacterized LOC115062697, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003842636.1
SIO_010081: LOC115062697
subclass of: SO_0000673
so part of: LOC115062697
location: join(8038036..8038324,8045295..8045400,8048374..8048465)
location: region:8038036-8048465:1
so has part: feature:8038036-8038324:1:exon
so has part: feature:8045295-8045400:1:exon
so has part: feature:8048374-8048465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8038036-8038324:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8045295-8045400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8048374-8048465:1:exon

position:8048374:1
position: 8048374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115062697
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: lncRNA
gene: LOC115062697
product: uncharacterized LOC115062697, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003842635.1
SIO_010081: LOC115062697
subclass of: SO_0000673
so part of: LOC115062697
location: join(8038036..8038324,8045295..8045400,8047414..8048095)
location: region:8038036-8048095:1
so has part: feature:8038036-8038324:1:exon
so has part: feature:8045295-8045400:1:exon
so has part: feature:8047414-8048095:1:exon

position:8048095:1
position: 8048095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8038036-8038324:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8045295-8045400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8047414-8048095:1:exon

position:8047414:1
position: 8047414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110337775
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110337775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8067323..8068954
location: region:8067323-8068954:1
so has part: feature:8067323-8068954:1:exon

110337775
type: Gene
SIO_000068: ncbigene

position:8067323:1
position: 8067323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8068954:1
position: 8068954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8067323-8068954:1:exon

LOC110337775
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110337775
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110337775
subclass of: SO_0000673
so part of: LOC110337775
location: 8067323..8068954
location: region:8067323-8068954:1
so has part: feature:8067323-8068954:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8067323-8068954:1:exon

Dnajb1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Dnajb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8074954..8078694
location: region:8074954-8078694:1
so has part: feature:8074954-8078694:1:exon
subclass of: SO_0000010

110337241
type: Gene
SIO_000068: ncbigene

position:8074954:1
position: 8074954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8078694:1
position: 8078694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8074954-8078694:1:exon

Dnajb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Dnajb1
product: DnaJ heat shock protein family (Hsp40) member B1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 mRNAs, 25 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021220021.1
SIO_010081: Dnajb1
subclass of: SO_0000673
so part of: Dnajb1
location: join(8074954..8075321,8076603..8077180,8077394..8078694)
location: region:8074954-8078694:1
so has part: feature:8074954-8075321:1:exon
so has part: feature:8076603-8077180:1:exon
so has part: feature:8077394-8078694:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8074954-8075321:1:exon

position:8075321:1
position: 8075321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8076603-8077180:1:exon

position:8076603:1
position: 8076603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8077180:1
position: 8077180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8077394-8078694:1:exon

position:8077394:1
position: 8077394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Dnajb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Dnajb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily B member 1
translation: MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGGGPSGGSSGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDPFNFPMGMGGFTNMNFGRSRPSQEPTRKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLVIEFEVIFPERIPISSRTILEQVLPI
SIO_010081: Dnajb1
subclass of: SO_0000673
so part of: Dnajb1
location: join(8075111..8075321,8076603..8077180,8077394..8077624)
location: region:8075111-8077624:1
so has part: feature:8075111-8075321:1:exon
so has part: feature:8076603-8077180:1:exon
so has part: feature:8077394-8077624:1:exon

XP_021075680.1
type: Protein
SIO_000068: ncbiprotein

position:8075111:1
position: 8075111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8077624:1
position: 8077624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8075111-8075321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8076603-8077180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8077394-8077624:1:exon

Gipc1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Gipc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8117420..8129753
location: region:8117420-8129753:1
so has part: feature:8117420-8129753:1:exon
subclass of: SO_0000010

110337334
type: Gene
SIO_000068: ncbigene

position:8117420:1
position: 8117420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8129753:1
position: 8129753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8117420-8129753:1:exon

Gipc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Gipc1
product: GIPC PDZ domain containing family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 mRNAs, 17 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021220201.1
SIO_010081: Gipc1
subclass of: SO_0000673
so part of: Gipc1
location: join(8117420..8117499,8125913..8126233,8126922..8127107,8127202..8127382,8128014..8128126,8128860..8128941,8129068..8129753)
location: region:8117420-8129753:1
so has part: feature:8117420-8117499:1:exon
so has part: feature:8125913-8126233:1:exon
so has part: feature:8126922-8127107:1:exon
so has part: feature:8127202-8127382:1:exon
so has part: feature:8128014-8128126:1:exon
so has part: feature:8128860-8128941:1:exon
so has part: feature:8129068-8129753:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8117420-8117499:1:exon

position:8117499:1
position: 8117499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8125913-8126233:1:exon

position:8125913:1
position: 8125913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8126233:1
position: 8126233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8126922-8127107:1:exon

position:8126922:1
position: 8126922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8127107:1
position: 8127107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8127202-8127382:1:exon

position:8127202:1
position: 8127202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8127382:1
position: 8127382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8128014-8128126:1:exon

position:8128014:1
position: 8128014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8128126:1
position: 8128126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8128860-8128941:1:exon

position:8128860:1
position: 8128860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8128941:1
position: 8128941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8129068-8129753:1:exon

position:8129068:1
position: 8129068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gipc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Gipc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ domain-containing protein GIPC1
translation: MPLGLGRRKKAPPLVENEEAEPSRSGLGVGEPGPLGGSGAGESQMGLPPPPAALRPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPAAEVMFCTLNTHKVDMDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSEEALGLTITDNGAGYAFIKRIKEGSVIDHIQLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGHPGSGPQLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY
SIO_010081: Gipc1
subclass of: SO_0000673
so part of: Gipc1
location: join(8125946..8126233,8126922..8127107,8127202..8127382,8128014..8128126,8128860..8128941,8129068..8129219)
location: region:8125946-8129219:1
so has part: feature:8125946-8126233:1:exon
so has part: feature:8126922-8127107:1:exon
so has part: feature:8127202-8127382:1:exon
so has part: feature:8128014-8128126:1:exon
so has part: feature:8128860-8128941:1:exon
so has part: feature:8129068-8129219:1:exon

XP_021075860.1
type: Protein
SIO_000068: ncbiprotein

position:8125946:1
position: 8125946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8129219:1
position: 8129219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8125946-8126233:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8126922-8127107:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8127202-8127382:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8128014-8128126:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8128860-8128941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8129068-8129219:1:exon

Ptger1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Ptger1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8132517..8134886
location: region:8132517-8134886:1
so has part: feature:8132517-8134886:1:exon
subclass of: SO_0000010

110337305
type: Gene
SIO_000068: ncbigene

position:8132517:1
position: 8132517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8134886:1
position: 8134886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8132517-8134886:1:exon

Ptger1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ptger1
product: prostaglandin E receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021220153.2
SIO_010081: Ptger1
subclass of: SO_0000673
so part of: Ptger1
location: join(8132517..8133714,8134130..8134886)
location: region:8132517-8134886:1
so has part: feature:8132517-8133714:1:exon
so has part: feature:8134130-8134886:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8132517-8133714:1:exon

position:8133714:1
position: 8133714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8134130-8134886:1:exon

position:8134130:1
position: 8134130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ptger1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ptger1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin E2 receptor EP1 subtype
translation: MGAVTGEIGSEMEQLGSCGGALGTEGWDPTSLCPLLIYTALLATDMSPYRLNLSLADEAATCATPRLPNTSVVLPTGDNGTSPALPIFSMTLGAVSNVLALALLAQVAGRMRRRRSAATFLLFVASLLAIDLAGHVIPGALVLRLYTAGRAPAGGACHFLGGCMVFFGLCPLLLGCGMAVERCVGVTQPLIHAARVSVARARLALVVLAAMALAVALLPLVHVGRYELQYPGTWCFISLGPRGGWRQALLAGLFAGLGLAALLAALVCNTLSGLALLRARWRRRRSRRFRETAGPDDRRRWGSRGPRLASASSASSITSATATLRSSRGGGSARRVHAHDVEMVGQLVGIMVVSCICWSPLLVLVVLAIGGWNSNSLQRPLFLAVRLASWNQILDPWVYILLRQAMLRQLLRLLPLRVSAKGGPTELGLTKSAWEASSLRSSRHSGFSHF
SIO_010081: Ptger1
subclass of: SO_0000673
so part of: Ptger1
location: join(8132629..8133714,8134130..8134396)
location: region:8132629-8134396:1
so has part: feature:8132629-8133714:1:exon
so has part: feature:8134130-8134396:1:exon

XP_021075812.2
type: Protein
SIO_000068: ncbiprotein

position:8132629:1
position: 8132629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8134396:1
position: 8134396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8132629-8133714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8134130-8134396:1:exon

Pkn1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Pkn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8134953..8164886)
location: region:8134953-8164886:-1
so has part: feature:8134953-8164886:-1:exon
subclass of: SO_0000010

110337776
type: Gene
SIO_000068: ncbigene

position:8134953:-1
position: 8134953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8164886:-1
position: 8164886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8134953-8164886:-1:exon

Pkn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Pkn1
product: protein kinase N1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029532719.1
SIO_010081: Pkn1
subclass of: SO_0000673
so part of: Pkn1
location: complement(join(8134953..8135241,8135589..8135669,8135772..8135879,8136135..8136277,8136549..8136625,8136741..8136803,8136978..8137154,8138114..8138205,8138292..8138367,8138443..8138522,8141923..8142016,8142105..8142246,8142330..8142405,8145548..8145691,8145774..8145883,8147807..8147998,8148406..8148619,8149020..8149186,8155037..8155190,8155303..8155454,8157925..8158225,8164693..8164886))
location: region:8134953-8164886:-1
so has part: feature:8164693-8164886:-1:exon
so has part: feature:8157925-8158225:-1:exon
so has part: feature:8155303-8155454:-1:exon
so has part: feature:8155037-8155190:-1:exon
so has part: feature:8149020-8149186:-1:exon
so has part: feature:8148406-8148619:-1:exon
so has part: feature:8147807-8147998:-1:exon
so has part: feature:8145774-8145883:-1:exon
so has part: feature:8145548-8145691:-1:exon
so has part: feature:8142330-8142405:-1:exon
so has part: feature:8142105-8142246:-1:exon
so has part: feature:8141923-8142016:-1:exon
so has part: feature:8138443-8138522:-1:exon
so has part: feature:8138292-8138367:-1:exon
so has part: feature:8138114-8138205:-1:exon
so has part: feature:8136978-8137154:-1:exon
so has part: feature:8136741-8136803:-1:exon
so has part: feature:8136549-8136625:-1:exon
so has part: feature:8136135-8136277:-1:exon
so has part: feature:8135772-8135879:-1:exon
so has part: feature:8135589-8135669:-1:exon
so has part: feature:8134953-8135241:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8164693-8164886:-1:exon

position:8164693:-1
position: 8164693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8157925-8158225:-1:exon

position:8157925:-1
position: 8157925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8158225:-1
position: 8158225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8155303-8155454:-1:exon

position:8155303:-1
position: 8155303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8155454:-1
position: 8155454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8155037-8155190:-1:exon

position:8155037:-1
position: 8155037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8155190:-1
position: 8155190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8149020-8149186:-1:exon

position:8149020:-1
position: 8149020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8149186:-1
position: 8149186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8148406-8148619:-1:exon

position:8148406:-1
position: 8148406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8148619:-1
position: 8148619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8147807-8147998:-1:exon

position:8147807:-1
position: 8147807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8147998:-1
position: 8147998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8145774-8145883:-1:exon

position:8145774:-1
position: 8145774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8145883:-1
position: 8145883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8145548-8145691:-1:exon

position:8145548:-1
position: 8145548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8145691:-1
position: 8145691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8142330-8142405:-1:exon

position:8142330:-1
position: 8142330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8142405:-1
position: 8142405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8142105-8142246:-1:exon

position:8142105:-1
position: 8142105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8142246:-1
position: 8142246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8141923-8142016:-1:exon

position:8141923:-1
position: 8141923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8142016:-1
position: 8142016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8138443-8138522:-1:exon

position:8138443:-1
position: 8138443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8138522:-1
position: 8138522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8138292-8138367:-1:exon

position:8138292:-1
position: 8138292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8138367:-1
position: 8138367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8138114-8138205:-1:exon

position:8138114:-1
position: 8138114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8138205:-1
position: 8138205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8136978-8137154:-1:exon

position:8136978:-1
position: 8136978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8137154:-1
position: 8137154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8136741-8136803:-1:exon

position:8136741:-1
position: 8136741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8136803:-1
position: 8136803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8136549-8136625:-1:exon

position:8136549:-1
position: 8136549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8136625:-1
position: 8136625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8136135-8136277:-1:exon

position:8136135:-1
position: 8136135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8136277:-1
position: 8136277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:8135772-8135879:-1:exon

position:8135772:-1
position: 8135772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8135879:-1
position: 8135879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:8135589-8135669:-1:exon

position:8135589:-1
position: 8135589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8135669:-1
position: 8135669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:8134953-8135241:-1:exon

position:8135241:-1
position: 8135241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pkn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Pkn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase N1
translation: MAGDAVQSEPRSWSLLEQLGLAGADLAAPGVQQQLELERERLKREIRKELKLKEGAENLRRATTDLGRSLAPVELLLRGSARRLDLLHQQLQELHAHVVLPDPAAGSDASQSLAEASPICSSTNLSRVAGLEKQLAIELKVKQGAENMIQTYSNGSSKYMAICLWLCRHLHRDVQRGEDDVAPAGSNWATSPQSSGSPDFVVESTEAQRIPWPMSIGDPELGAVELRIEELRHHFRVEHAVAEGAKNVLRLLSGAKAPDRKAVSEAQEKLTESNQKLGLLRESLERRLGELPADHPKGRLLREELTAASSSAFSAILPGPFPATHYSTLSKPAPLTGTLEVRVVGCKNLPETIPWNPPSVGASGTPESRTPFLSRPARGLYSRSGSLSGRSSLRGEAENATEVSTVLKLDNTVVGQTAWKPCGPNAWDQSFTLELERARELELAVFWRDQRGLCALKFLKLEDFLDNERHEVQLDMEPQGCLVAEVTFRNPIIERIPRLQRQKKIFSKQQGKAFQRARQMNIDVATWVRLLRRLIPNAVATGTFSPNASPGAEIRHTGDISMEKLNLGADSDSSSQKSPSGLPSTSCSLSSPTHESTTSPELPSETQETPGPGLCSPLRKSSLTLEDFKFLAVLGRGHFGKVLLSEFRSSGELFAIKALKKGDIVARDEVESLMCEKRILAAVTRAGHPFLVNLFGCFQTPEHVCFVMEYSAGGDLMLHIHSDVFSEPRAVFYSACVVLGLQFLHEHKIVYRDLKLDNLLLDTEGYVKIADFGLCKEGMGYGDRTSTFCGTPEFLAPEVLTDTSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSAEAIGIMRRLLRRNPERRLGSTERDAEDVKKQPFFRSLGWDVLLARRLPPPFVPTLSGRTDVSNFDEEFTGEAPTLSPPRDARPLTDAEQAAFRDFDFVARGY
SIO_010081: Pkn1
subclass of: SO_0000673
so part of: Pkn1
location: complement(join(8135038..8135241,8135589..8135669,8135772..8135879,8136135..8136277,8136549..8136625,8136741..8136803,8136978..8137154,8138114..8138205,8138292..8138367,8138443..8138522,8141923..8142016,8142105..8142246,8142330..8142405,8145548..8145691,8145774..8145883,8147807..8147998,8148406..8148619,8149020..8149186,8155037..8155190,8155303..8155454,8157925..8158225,8164693..8164713))
location: region:8135038-8164713:-1
so has part: feature:8164693-8164713:-1:exon
so has part: feature:8157925-8158225:-1:exon
so has part: feature:8155303-8155454:-1:exon
so has part: feature:8155037-8155190:-1:exon
so has part: feature:8149020-8149186:-1:exon
so has part: feature:8148406-8148619:-1:exon
so has part: feature:8147807-8147998:-1:exon
so has part: feature:8145774-8145883:-1:exon
so has part: feature:8145548-8145691:-1:exon
so has part: feature:8142330-8142405:-1:exon
so has part: feature:8142105-8142246:-1:exon
so has part: feature:8141923-8142016:-1:exon
so has part: feature:8138443-8138522:-1:exon
so has part: feature:8138292-8138367:-1:exon
so has part: feature:8138114-8138205:-1:exon
so has part: feature:8136978-8137154:-1:exon
so has part: feature:8136741-8136803:-1:exon
so has part: feature:8136549-8136625:-1:exon
so has part: feature:8136135-8136277:-1:exon
so has part: feature:8135772-8135879:-1:exon
so has part: feature:8135589-8135669:-1:exon
so has part: feature:8135038-8135241:-1:exon

XP_029388579.1
type: Protein
SIO_000068: ncbiprotein

position:8135038:-1
position: 8135038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8164713:-1
position: 8164713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8164693-8164713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8157925-8158225:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8155303-8155454:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8155037-8155190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8149020-8149186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8148406-8148619:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8147807-8147998:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8145774-8145883:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8145548-8145691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8142330-8142405:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8142105-8142246:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8141923-8142016:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8138443-8138522:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8138292-8138367:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8138114-8138205:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8136978-8137154:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8136741-8136803:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8136549-8136625:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8136135-8136277:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8135772-8135879:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8135589-8135669:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:8135038-8135241:-1:exon

Ddx39a
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Ddx39a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8183166..8191078
location: region:8183166-8191078:1
so has part: feature:8183166-8191078:1:exon
subclass of: SO_0000010

110337328
type: Gene
SIO_000068: ncbigene

position:8183166:1
position: 8183166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8191078:1
position: 8191078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8183166-8191078:1:exon

Ddx39a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ddx39a
product: DExD-box helicase 39A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 mRNAs, 38 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021220194.1
SIO_010081: Ddx39a
subclass of: SO_0000673
so part of: Ddx39a
location: join(8183166..8183326,8187174..8187385,8187597..8187724,8188340..8188432,8188727..8188910,8189538..8189656,8190030..8190161,8190247..8190356,8190446..8190590,8190686..8190833,8190920..8191078)
location: region:8183166-8191078:1
so has part: feature:8183166-8183326:1:exon
so has part: feature:8187174-8187385:1:exon
so has part: feature:8187597-8187724:1:exon
so has part: feature:8188340-8188432:1:exon
so has part: feature:8188727-8188910:1:exon
so has part: feature:8189538-8189656:1:exon
so has part: feature:8190030-8190161:1:exon
so has part: feature:8190247-8190356:1:exon
so has part: feature:8190446-8190590:1:exon
so has part: feature:8190686-8190833:1:exon
so has part: feature:8190920-8191078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8183166-8183326:1:exon

position:8183326:1
position: 8183326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8187174-8187385:1:exon

position:8187174:1
position: 8187174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8187385:1
position: 8187385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8187597-8187724:1:exon

position:8187597:1
position: 8187597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8187724:1
position: 8187724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8188340-8188432:1:exon

position:8188340:1
position: 8188340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8188432:1
position: 8188432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8188727-8188910:1:exon

position:8188727:1
position: 8188727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8188910:1
position: 8188910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8189538-8189656:1:exon

position:8189538:1
position: 8189538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8189656:1
position: 8189656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8190030-8190161:1:exon

position:8190030:1
position: 8190030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8190161:1
position: 8190161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8190247-8190356:1:exon

position:8190247:1
position: 8190247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8190356:1
position: 8190356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8190446-8190590:1:exon

position:8190446:1
position: 8190446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8190590:1
position: 8190590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8190686-8190833:1:exon

position:8190686:1
position: 8190686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8190833:1
position: 8190833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8190920-8191078:1:exon

position:8190920:1
position: 8190920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ddx39a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ddx39a
product: DExD-box helicase 39A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029532441.1
SIO_010081: Ddx39a
subclass of: SO_0000673
so part of: Ddx39a
location: join(8183166..8183326,8187174..8187385,8187597..8187724,8188340..8188432,8188727..8188910,8189270..8189328,8189538..8189656,8190030..8190161,8190247..8190356,8190446..8190590,8190686..8190833,8190920..8191074)
location: region:8183166-8191074:1
so has part: feature:8183166-8183326:1:exon
so has part: feature:8187174-8187385:1:exon
so has part: feature:8187597-8187724:1:exon
so has part: feature:8188340-8188432:1:exon
so has part: feature:8188727-8188910:1:exon
so has part: feature:8189270-8189328:1:exon
so has part: feature:8189538-8189656:1:exon
so has part: feature:8190030-8190161:1:exon
so has part: feature:8190247-8190356:1:exon
so has part: feature:8190446-8190590:1:exon
so has part: feature:8190686-8190833:1:exon
so has part: feature:8190920-8191074:1:exon

position:8191074:1
position: 8191074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8183166-8183326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8187174-8187385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8187597-8187724:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8188340-8188432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8188727-8188910:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8189270-8189328:1:exon

position:8189270:1
position: 8189270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8189328:1
position: 8189328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8189538-8189656:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8190030-8190161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8190247-8190356:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8190446-8190590:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8190686-8190833:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8190920-8191074:1:exon

Ddx39a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ddx39a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX39A isoform X1
translation: MAEQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYIEQSR
SIO_010081: Ddx39a
subclass of: SO_0000673
so part of: Ddx39a
location: join(8187178..8187385,8187597..8187724,8188340..8188432,8188727..8188910,8189538..8189656,8190030..8190161,8190247..8190356,8190446..8190590,8190686..8190833,8190920..8190936)
location: region:8187178-8190936:1
so has part: feature:8187178-8187385:1:exon
so has part: feature:8187597-8187724:1:exon
so has part: feature:8188340-8188432:1:exon
so has part: feature:8188727-8188910:1:exon
so has part: feature:8189538-8189656:1:exon
so has part: feature:8190030-8190161:1:exon
so has part: feature:8190247-8190356:1:exon
so has part: feature:8190446-8190590:1:exon
so has part: feature:8190686-8190833:1:exon
so has part: feature:8190920-8190936:1:exon

XP_021075853.1
type: Protein
SIO_000068: ncbiprotein

position:8187178:1
position: 8187178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8190936:1
position: 8190936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8187178-8187385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8187597-8187724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8188340-8188432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8188727-8188910:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8189538-8189656:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8190030-8190161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8190247-8190356:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8190446-8190590:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8190686-8190833:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8190920-8190936:1:exon

Ddx39a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ddx39a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX39A isoform X2
translation: MLAANMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYIEQSR
SIO_010081: Ddx39a
subclass of: SO_0000673
so part of: Ddx39a
location: join(8189316..8189328,8189538..8189656,8190030..8190161,8190247..8190356,8190446..8190590,8190686..8190833,8190920..8190936)
location: region:8189316-8190936:1
so has part: feature:8189316-8189328:1:exon
so has part: feature:8189538-8189656:1:exon
so has part: feature:8190030-8190161:1:exon
so has part: feature:8190247-8190356:1:exon
so has part: feature:8190446-8190590:1:exon
so has part: feature:8190686-8190833:1:exon
so has part: feature:8190920-8190936:1:exon

XP_029388301.1
type: Protein
SIO_000068: ncbiprotein

position:8189316:1
position: 8189316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8189316-8189328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8189538-8189656:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8190030-8190161:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8190247-8190356:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8190446-8190590:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8190686-8190833:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8190920-8190936:1:exon

Adgre5
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Adgre5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8190753..8209641)
location: region:8190753-8209641:-1
so has part: feature:8190753-8209641:-1:exon
subclass of: SO_0000010

110337450
type: Gene
SIO_000068: ncbigene

position:8190753:-1
position: 8190753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8209641:-1
position: 8209641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8190753-8209641:-1:exon

Adgre5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Adgre5
product: adhesion G protein-coupled receptor E5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021220376.2
SIO_010081: Adgre5
subclass of: SO_0000673
so part of: Adgre5
location: complement(join(8190753..8191697,8191778..8191876,8191976..8192144,8192218..8192309,8192398..8192467,8192565..8192794,8192951..8193142,8193653..8193820,8196036..8196259,8196373..8196489,8196561..8196726,8197344..8197421,8197538..8197584,8197663..8197806,8201914..8202066,8202504..8202620,8202798..8202848,8209505..8209641))
location: region:8190753-8209641:-1
so has part: feature:8209505-8209641:-1:exon
so has part: feature:8202798-8202848:-1:exon
so has part: feature:8202504-8202620:-1:exon
so has part: feature:8201914-8202066:-1:exon
so has part: feature:8197663-8197806:-1:exon
so has part: feature:8197538-8197584:-1:exon
so has part: feature:8197344-8197421:-1:exon
so has part: feature:8196561-8196726:-1:exon
so has part: feature:8196373-8196489:-1:exon
so has part: feature:8196036-8196259:-1:exon
so has part: feature:8193653-8193820:-1:exon
so has part: feature:8192951-8193142:-1:exon
so has part: feature:8192565-8192794:-1:exon
so has part: feature:8192398-8192467:-1:exon
so has part: feature:8192218-8192309:-1:exon
so has part: feature:8191976-8192144:-1:exon
so has part: feature:8191778-8191876:-1:exon
so has part: feature:8190753-8191697:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8209505-8209641:-1:exon

position:8209505:-1
position: 8209505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8202798-8202848:-1:exon

position:8202798:-1
position: 8202798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8202848:-1
position: 8202848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8202504-8202620:-1:exon

position:8202504:-1
position: 8202504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8202620:-1
position: 8202620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8201914-8202066:-1:exon

position:8201914:-1
position: 8201914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8202066:-1
position: 8202066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8197663-8197806:-1:exon

position:8197663:-1
position: 8197663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8197806:-1
position: 8197806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8197538-8197584:-1:exon

position:8197538:-1
position: 8197538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8197584:-1
position: 8197584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8197344-8197421:-1:exon

position:8197344:-1
position: 8197344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8197421:-1
position: 8197421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8196561-8196726:-1:exon

position:8196561:-1
position: 8196561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8196726:-1
position: 8196726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8196373-8196489:-1:exon

position:8196373:-1
position: 8196373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8196489:-1
position: 8196489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8196036-8196259:-1:exon

position:8196036:-1
position: 8196036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8196259:-1
position: 8196259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8193653-8193820:-1:exon

position:8193653:-1
position: 8193653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8193820:-1
position: 8193820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8192951-8193142:-1:exon

position:8192951:-1
position: 8192951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8193142:-1
position: 8193142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8192565-8192794:-1:exon

position:8192565:-1
position: 8192565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8192794:-1
position: 8192794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8192398-8192467:-1:exon

position:8192398:-1
position: 8192398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8192467:-1
position: 8192467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8192218-8192309:-1:exon

position:8192218:-1
position: 8192218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8192309:-1
position: 8192309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8191976-8192144:-1:exon

position:8191976:-1
position: 8191976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8192144:-1
position: 8192144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8191778-8191876:-1:exon

position:8191778:-1
position: 8191778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8191876:-1
position: 8191876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8190753-8191697:-1:exon

position:8191697:-1
position: 8191697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Adgre5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Adgre5
product: adhesion G protein-coupled receptor E5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021220375.2
SIO_010081: Adgre5
subclass of: SO_0000673
so part of: Adgre5
location: complement(join(8190753..8191697,8191778..8191876,8191976..8192144,8192218..8192309,8192398..8192467,8192565..8192794,8192951..8193142,8193653..8193820,8196036..8196259,8196373..8196489,8196561..8196726,8197344..8197421,8197538..8197584,8197663..8197806,8198389..8198535,8201914..8202066,8202504..8202620,8202798..8202848,8209505..8209641))
location: region:8190753-8209641:-1
so has part: feature:8209505-8209641:-1:exon
so has part: feature:8202798-8202848:-1:exon
so has part: feature:8202504-8202620:-1:exon
so has part: feature:8201914-8202066:-1:exon
so has part: feature:8198389-8198535:-1:exon
so has part: feature:8197663-8197806:-1:exon
so has part: feature:8197538-8197584:-1:exon
so has part: feature:8197344-8197421:-1:exon
so has part: feature:8196561-8196726:-1:exon
so has part: feature:8196373-8196489:-1:exon
so has part: feature:8196036-8196259:-1:exon
so has part: feature:8193653-8193820:-1:exon
so has part: feature:8192951-8193142:-1:exon
so has part: feature:8192565-8192794:-1:exon
so has part: feature:8192398-8192467:-1:exon
so has part: feature:8192218-8192309:-1:exon
so has part: feature:8191976-8192144:-1:exon
so has part: feature:8191778-8191876:-1:exon
so has part: feature:8190753-8191697:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8209505-8209641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8202798-8202848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8202504-8202620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8201914-8202066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8198389-8198535:-1:exon

position:8198389:-1
position: 8198389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8198535:-1
position: 8198535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8197663-8197806:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8197538-8197584:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8197344-8197421:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8196561-8196726:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8196373-8196489:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8196036-8196259:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8193653-8193820:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8192951-8193142:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8192565-8192794:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8192398-8192467:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8192218-8192309:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8191976-8192144:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8191778-8191876:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8190753-8191697:-1:exon

Adgre5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Adgre5
product: adhesion G protein-coupled receptor E5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021220374.2
SIO_010081: Adgre5
subclass of: SO_0000673
so part of: Adgre5
location: complement(join(8190753..8191697,8191778..8191876,8191976..8192144,8192218..8192309,8192398..8192467,8192565..8192794,8192951..8193142,8193653..8193820,8196036..8196259,8196373..8196489,8196561..8196726,8197344..8197421,8197538..8197584,8197663..8197806,8198389..8198535,8200122..8200256,8201914..8202066,8202504..8202620,8202798..8202848,8209505..8209641))
location: region:8190753-8209641:-1
so has part: feature:8209505-8209641:-1:exon
so has part: feature:8202798-8202848:-1:exon
so has part: feature:8202504-8202620:-1:exon
so has part: feature:8201914-8202066:-1:exon
so has part: feature:8200122-8200256:-1:exon
so has part: feature:8198389-8198535:-1:exon
so has part: feature:8197663-8197806:-1:exon
so has part: feature:8197538-8197584:-1:exon
so has part: feature:8197344-8197421:-1:exon
so has part: feature:8196561-8196726:-1:exon
so has part: feature:8196373-8196489:-1:exon
so has part: feature:8196036-8196259:-1:exon
so has part: feature:8193653-8193820:-1:exon
so has part: feature:8192951-8193142:-1:exon
so has part: feature:8192565-8192794:-1:exon
so has part: feature:8192398-8192467:-1:exon
so has part: feature:8192218-8192309:-1:exon
so has part: feature:8191976-8192144:-1:exon
so has part: feature:8191778-8191876:-1:exon
so has part: feature:8190753-8191697:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8209505-8209641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8202798-8202848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8202504-8202620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8201914-8202066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8200122-8200256:-1:exon

position:8200122:-1
position: 8200122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8200256:-1
position: 8200256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8198389-8198535:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8197663-8197806:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8197538-8197584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8197344-8197421:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8196561-8196726:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8196373-8196489:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8196036-8196259:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8193653-8193820:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8192951-8193142:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8192565-8192794:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8192398-8192467:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8192218-8192309:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8191976-8192144:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8191778-8191876:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8190753-8191697:-1:exon

Adgre5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Adgre5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD97 antigen isoform X3
translation: MRGVRCPRLLVVCILLSLSGASTQKAENCPRWCPTNSECVSKRSCKCKPGFSSEKDLITNPAGSCEDINECLLPGFSCGAFATCKNSEGSYACICNLGYKLLSGAESFANASENTCQDVDECSSGQHQCHSSTICKNILGSYRCHCRPGWKSTSGSLRGPDTICQEPPFPTWTLLPAAPSQTLSRFSVEVQNLLQDFNPATANYTIQKLIEAVDKLLEVPMDLETQTQQVAAQLLSNLEQSLRTLAQFLPKGPFTYTSPSNTELSLMVKEQDNKDVTTVHHGRAWMELDWAVTAGTQVSENGHSVAGILSSPNMEKLLANTPLNLEQRRATLEDFYGSPIPRVSLKLLSNINSIFLTNTDTEKLASNVTFKFNFTSVESIEPRHELMCAFWKAHDNGDGYWDTDGCSMNGTGFCHCNHLTSFAILMAQYHVQDPRLELITKVGLLLSLICLLLCILTFLLVKPIQSSRTMVHLHLCICLFLGSIIFLVGVENEGGEVGLRCRLVAVMLHFCFLAAFCWMALEGVELYFLVVRVFQGQGLSTWHRCLIGYGVPLLIVAISMAAVKMDGYGHATYCWLDFRKQGFLWSFSGPVAFIIFCNAAIFVITVWKLTKKFSEINPNMKKLRKARVLTITAIAQLLVLGCTWGFGLFLFNPHSTWLSYIFTLLNCLQGLFLYVTLCLLNKKVREEYWKWACMVTGSKYTEFNSSTTGTGTSQTRALRSSESGM
SIO_010081: Adgre5
subclass of: SO_0000673
so part of: Adgre5
location: complement(join(8191668..8191697,8191778..8191876,8191976..8192144,8192218..8192309,8192398..8192467,8192565..8192794,8192951..8193142,8193653..8193820,8196036..8196259,8196373..8196489,8196561..8196726,8197344..8197421,8197538..8197584,8197663..8197806,8201914..8202066,8202504..8202620,8202798..8202848,8209505..8209535))
location: region:8191668-8209535:-1
so has part: feature:8209505-8209535:-1:exon
so has part: feature:8202798-8202848:-1:exon
so has part: feature:8202504-8202620:-1:exon
so has part: feature:8201914-8202066:-1:exon
so has part: feature:8197663-8197806:-1:exon
so has part: feature:8197538-8197584:-1:exon
so has part: feature:8197344-8197421:-1:exon
so has part: feature:8196561-8196726:-1:exon
so has part: feature:8196373-8196489:-1:exon
so has part: feature:8196036-8196259:-1:exon
so has part: feature:8193653-8193820:-1:exon
so has part: feature:8192951-8193142:-1:exon
so has part: feature:8192565-8192794:-1:exon
so has part: feature:8192398-8192467:-1:exon
so has part: feature:8192218-8192309:-1:exon
so has part: feature:8191976-8192144:-1:exon
so has part: feature:8191778-8191876:-1:exon
so has part: feature:8191668-8191697:-1:exon

XP_021076035.1
type: Protein
SIO_000068: ncbiprotein

position:8191668:-1
position: 8191668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8209535:-1
position: 8209535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8209505-8209535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8202798-8202848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8202504-8202620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8201914-8202066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8197663-8197806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8197538-8197584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8197344-8197421:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8196561-8196726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8196373-8196489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8196036-8196259:-1:exon