Mus pahari chromosome 16, PAHARI_EIJ_v1.1, whole genome shotgun sequence.
type: Entry
definition: Mus pahari chromosome 16, PAHARI_EIJ_v1.1, whole genome shotgun sequence.
sequence version: NC_034605.1
sequence date: 2019-06-19
sequence: sequence
division: CON
label: NC_034605.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA387191
dblink: SAMEA3367645
keyword: WGS
keyword: RefSeq
source: Mus pahari (shrew mouse)
organism: Mus pahari
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLT608294.1.\nAssembly name: PAHARI_EIJ_v1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the EBI on 2017/04/28. The\noriginal whole-genome shotgun project has the accession\nFMBV00000000.2.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Mus pahari Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 69342659
topology: linear
so has quality: SO_0000987
location: 1..69342659
location: region:1-69342659:1
RO_0002162: 10093

NC_034605
type: RefSeq
SIO_000068: refseq

PRJNA387191
type: BioProject
SIO_000068: bioproject

SAMEA3367645
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69342659:1
position: 69342659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-69342659:1:source
so part of: sequence
organism: Mus pahari
mol type: genomic DNA
chromosome: 16
sex: female
tissue type: tail

10093
type: Taxonomy
SIO_000068: taxonomy

Fam171a1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Fam171a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 155265..267525
location: region:155265-267525:1
so has part: feature:155265-267525:1:exon
subclass of: SO_0000010

110333842
type: Gene
SIO_000068: ncbigene

position:155265:1
position: 155265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267525:1
position: 267525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155265-267525:1:exon

Fam171a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Fam171a1
product: family with sequence similarity 171 member A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021215586.2
SIO_010081: Fam171a1
subclass of: SO_0000673
so part of: Fam171a1
location: join(155265..155529,214134..214361,222536..222628,235207..235365,240237..240413,259973..260089,263118..263232,264574..267525)
location: region:155265-267525:1
so has part: feature:155265-155529:1:exon
so has part: feature:214134-214361:1:exon
so has part: feature:222536-222628:1:exon
so has part: feature:235207-235365:1:exon
so has part: feature:240237-240413:1:exon
so has part: feature:259973-260089:1:exon
so has part: feature:263118-263232:1:exon
so has part: feature:264574-267525:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155265-155529:1:exon

position:155529:1
position: 155529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214134-214361:1:exon

position:214134:1
position: 214134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214361:1
position: 214361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:222536-222628:1:exon

position:222536:1
position: 222536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222628:1
position: 222628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:235207-235365:1:exon

position:235207:1
position: 235207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235365:1
position: 235365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:240237-240413:1:exon

position:240237:1
position: 240237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240413:1
position: 240413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:259973-260089:1:exon

position:259973:1
position: 259973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260089:1
position: 260089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:263118-263232:1:exon

position:263118:1
position: 263118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263232:1
position: 263232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:264574-267525:1:exon

position:264574:1
position: 264574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fam171a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Fam171a1
product: family with sequence similarity 171 member A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029547366.1
SIO_010081: Fam171a1
subclass of: SO_0000673
so part of: Fam171a1
location: join(155265..155529,214134..214361,222536..222628,235207..235365,240237..240413,259973..260089,264574..267525)
location: region:155265-267525:1
so has part: feature:155265-155529:1:exon
so has part: feature:214134-214361:1:exon
so has part: feature:222536-222628:1:exon
so has part: feature:235207-235365:1:exon
so has part: feature:240237-240413:1:exon
so has part: feature:259973-260089:1:exon
so has part: feature:264574-267525:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155265-155529:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214134-214361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222536-222628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235207-235365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240237-240413:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:259973-260089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264574-267525:1:exon

Fam171a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Fam171a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM171A1 isoform X1
translation: MSKSAALLLCLLGCHVWKAVTKTLREPGAGAQEVTLKVHISDASTHQPIADALIEIFASQVSVASGTSGTDGVAFIKFPYKLGNQLIVTATKHAYVPNSAPWKPIRLPVFSSLSFGLLPERSATLMVYEDVVQIVSGFQGARPQPRVHFQRRALRLPENTSYSDLTAFLTVASSPSEVDSFPYLRGLDGNGTGNSTRYDLTPITAVSVHLLSGNGTPVLVDGPIYVTVPLATQSSLRHNAYVAAWRFDQKLGTWLKSGLGLVHQEDSQLTWTYIAPQLGYWVAAMSPPIPGPVVTQDITTYHTVFLLAILGGMAFILLVLLCLLLYYCRRKCLKPRQHHRKLQLPPALESSKRDQSTSMSHINLLFSRRASDYPGPLSVSSHSRPEVPGTKELMGGVHLEMMSPNGEGDLHTPMLKLSYSTSQEFSSREELLSHKEEDKSQTSFDNLTPSGTLGKDYHKSVEIFPLKARKSMEKEGYEAPGNDDYRGSYNTVLSQPLFEKQDQEGLTSAGSKLTIQEHMYHVPLSPEKEQLLDRRPTECMMSRSVDHLERPTSFPRPGQLICCSSVDQVNDSVYRKVLPALVIPAHYMKLPGDHSYVSQPLVVPADQQLEIGRLQAELSNPHAGIFPHPSSQIQGQPLSSQAISQQHLQDAGAREWSSQSASMSESLSIPASLNDAALAQMNSEVQLLTEKALMELGGGKPLPHPRAWFVSLDGRSNAHVRHSYIDLQRAGRNGSNDASLDSGVDMNEPKSARKGRGDPLSLQQSHAPLQEHPQKDPRAPDSTACAQLLYLEDMDPSGSDCAATVCTPEDSALRCLLEGSGRRSGGQLPSLQEETTKRTSDVPLEPLASPNQRRSANDEDEEDDDDDDDDDQGEDKKSPWQKREERPLMAFNIK
SIO_010081: Fam171a1
subclass of: SO_0000673
so part of: Fam171a1
location: join(155433..155529,214134..214361,222536..222628,235207..235365,240237..240413,259973..260089,263118..263232,264574..266272)
location: region:155433-266272:1
so has part: feature:155433-155529:1:exon
so has part: feature:214134-214361:1:exon
so has part: feature:222536-222628:1:exon
so has part: feature:235207-235365:1:exon
so has part: feature:240237-240413:1:exon
so has part: feature:259973-260089:1:exon
so has part: feature:263118-263232:1:exon
so has part: feature:264574-266272:1:exon

XP_021071245.1
type: Protein
SIO_000068: ncbiprotein

position:155433:1
position: 155433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266272:1
position: 266272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155433-155529:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214134-214361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222536-222628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235207-235365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240237-240413:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:259973-260089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263118-263232:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264574-266272:1:exon

Fam171a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Fam171a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM171A1 isoform X2
translation: MSKSAALLLCLLGCHVWKAVTKTLREPGAGAQEVTLKVHISDASTHQPIADALIEIFASQVSVASGTSGTDGVAFIKFPYKLGNQLIVTATKHAYVPNSAPWKPIRLPVFSSLSFGLLPERSATLMVYEDVVQIVSGFQGARPQPRVHFQRRALRLPENTSYSDLTAFLTVASSPSEVDSFPYLRGLDGNGTGNSTRYDLTPITAVSVHLLSGNGTPVLVDGPIYVTVPLATQSSLRHNAYVAAWRFDQKLGTWLKSGLGLVHQEDSQLTWTYIAPQLGYWVAAMSPPIPGGSA
SIO_010081: Fam171a1
subclass of: SO_0000673
so part of: Fam171a1
location: join(155433..155529,214134..214361,222536..222628,235207..235365,240237..240413,259973..260089,264574..264587)
location: region:155433-264587:1
so has part: feature:155433-155529:1:exon
so has part: feature:214134-214361:1:exon
so has part: feature:222536-222628:1:exon
so has part: feature:235207-235365:1:exon
so has part: feature:240237-240413:1:exon
so has part: feature:259973-260089:1:exon
so has part: feature:264574-264587:1:exon

XP_029403226.1
type: Protein
SIO_000068: ncbiprotein

position:264587:1
position: 264587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155433-155529:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214134-214361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222536-222628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235207-235365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240237-240413:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:259973-260089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264574-264587:1:exon

LOC115065659
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115065659
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 187123..187226
location: region:187123-187226:1
so has part: feature:187123-187226:1:exon
subclass of: SO_0000623

115065659
type: Gene
SIO_000068: ncbigene

position:187123:1
position: 187123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187226:1
position: 187226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187123-187226:1:exon

LOC115065659
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snRNA
gene: LOC115065659
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003845427.1
SIO_010081: LOC115065659
subclass of: SO_0000673
so part of: LOC115065659
location: 187123..187226
location: region:187123-187226:1
so has part: feature:187123-187226:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187123-187226:1:exon

LOC110334137
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110334137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 285151..285669
location: region:285151-285669:1
so has part: feature:285151-285669:1:exon

110334137
type: Gene
SIO_000068: ncbigene

position:285151:1
position: 285151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285669:1
position: 285669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285151-285669:1:exon

LOC110334137
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110334137
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110334137
subclass of: SO_0000673
so part of: LOC110334137
location: 285151..285669
location: region:285151-285669:1
so has part: feature:285151-285669:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285151-285669:1:exon

Nmt2
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Nmt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 317988..365543
location: region:317988-365543:1
so has part: feature:317988-365543:1:exon
subclass of: SO_0000010

110333651
type: Gene
SIO_000068: ncbigene

position:317988:1
position: 317988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365543:1
position: 365543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317988-365543:1:exon

Nmt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Nmt2
product: N-myristoyltransferase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021215319.2
SIO_010081: Nmt2
subclass of: SO_0000673
so part of: Nmt2
location: join(317988..318183,339567..339702,340145..340187,341738..341787,344304..344448,350175..350293,350381..350472,350580..350696,352363..352533,353612..353720,359362..359532,361473..361640,361963..362100,362791..365543)
location: region:317988-365543:1
so has part: feature:317988-318183:1:exon
so has part: feature:339567-339702:1:exon
so has part: feature:340145-340187:1:exon
so has part: feature:341738-341787:1:exon
so has part: feature:344304-344448:1:exon
so has part: feature:350175-350293:1:exon
so has part: feature:350381-350472:1:exon
so has part: feature:350580-350696:1:exon
so has part: feature:352363-352533:1:exon
so has part: feature:353612-353720:1:exon
so has part: feature:359362-359532:1:exon
so has part: feature:361473-361640:1:exon
so has part: feature:361963-362100:1:exon
so has part: feature:362791-365543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317988-318183:1:exon

position:318183:1
position: 318183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:339567-339702:1:exon

position:339567:1
position: 339567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339702:1
position: 339702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:340145-340187:1:exon

position:340145:1
position: 340145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340187:1
position: 340187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:341738-341787:1:exon

position:341738:1
position: 341738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341787:1
position: 341787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:344304-344448:1:exon

position:344304:1
position: 344304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344448:1
position: 344448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:350175-350293:1:exon

position:350175:1
position: 350175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350293:1
position: 350293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:350381-350472:1:exon

position:350381:1
position: 350381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350472:1
position: 350472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:350580-350696:1:exon

position:350580:1
position: 350580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350696:1
position: 350696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:352363-352533:1:exon

position:352363:1
position: 352363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352533:1
position: 352533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:353612-353720:1:exon

position:353612:1
position: 353612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353720:1
position: 353720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:359362-359532:1:exon

position:359362:1
position: 359362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359532:1
position: 359532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:361473-361640:1:exon

position:361473:1
position: 361473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361640:1
position: 361640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:361963-362100:1:exon

position:361963:1
position: 361963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362100:1
position: 362100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:362791-365543:1:exon

position:362791:1
position: 362791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nmt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Nmt2
product: N-myristoyltransferase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021215320.2
SIO_010081: Nmt2
subclass of: SO_0000673
so part of: Nmt2
location: join(317988..318183,339567..339702,344304..344448,350175..350293,350381..350472,350580..350696,352363..352533,353612..353720,359362..359532,361473..361640,361963..362100,362791..365543)
location: region:317988-365543:1
so has part: feature:317988-318183:1:exon
so has part: feature:339567-339702:1:exon
so has part: feature:344304-344448:1:exon
so has part: feature:350175-350293:1:exon
so has part: feature:350381-350472:1:exon
so has part: feature:350580-350696:1:exon
so has part: feature:352363-352533:1:exon
so has part: feature:353612-353720:1:exon
so has part: feature:359362-359532:1:exon
so has part: feature:361473-361640:1:exon
so has part: feature:361963-362100:1:exon
so has part: feature:362791-365543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317988-318183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339567-339702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344304-344448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350175-350293:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350381-350472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350580-350696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:352363-352533:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:353612-353720:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:359362-359532:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:361473-361640:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:361963-362100:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:362791-365543:1:exon

Nmt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Nmt2
product: N-myristoyltransferase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021215322.2
SIO_010081: Nmt2
subclass of: SO_0000673
so part of: Nmt2
location: join(317989..318183,339567..339702,340145..340187,344304..344448,350175..350293,350381..350472,350580..350696,352363..352533,353612..353720,359362..359532,361473..361640,361963..362100,362791..365543)
location: region:317989-365543:1
so has part: feature:317989-318183:1:exon
so has part: feature:339567-339702:1:exon
so has part: feature:340145-340187:1:exon
so has part: feature:344304-344448:1:exon
so has part: feature:350175-350293:1:exon
so has part: feature:350381-350472:1:exon
so has part: feature:350580-350696:1:exon
so has part: feature:352363-352533:1:exon
so has part: feature:353612-353720:1:exon
so has part: feature:359362-359532:1:exon
so has part: feature:361473-361640:1:exon
so has part: feature:361963-362100:1:exon
so has part: feature:362791-365543:1:exon

position:317989:1
position: 317989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317989-318183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339567-339702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340145-340187:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344304-344448:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350175-350293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350381-350472:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:350580-350696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352363-352533:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:353612-353720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:359362-359532:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:361473-361640:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:361963-362100:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:362791-365543:1:exon

Nmt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Nmt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycylpeptide N-tetradecanoyltransferase 2 isoform X1
translation: MAEDSESAASQQSLELDDQDTCGIDGDNEEETEHAKGSPGGDLGAKKKKKKQKRKKEKPNSGGTKSDSASDSQEIKIQQSSKHNAIWQQISAGAAMGGDTMEGEWIDLRMYHKNPTIPIQKLQDIQRAMELLSACQGPARNIDEATKRRYQFWDTQPVPKLNEVITSHGAIEPDKDNIRQEPYSLPQGFMWDTLDLSNAEVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNRKLVGFISAIPANIRIYDSVKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLPKPVATCRYWHRSLNPRKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPMEPKDIKAVRELINVYLKQFHLAPVMNDQEVAHWFLPREHIIDTFVVENPSGKLTDFLSFYTLPSTVMHHPAHKSLKAAYSFYNIHTETPLLDLMNDALIIAKLKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWRCPGTDSEKVGLVLQ
SIO_010081: Nmt2
subclass of: SO_0000673
so part of: Nmt2
location: join(318074..318183,339567..339702,340145..340187,341738..341787,344304..344448,350175..350293,350381..350472,350580..350696,352363..352533,353612..353720,359362..359532,361473..361640,361963..362100,362791..362811)
location: region:318074-362811:1
so has part: feature:318074-318183:1:exon
so has part: feature:339567-339702:1:exon
so has part: feature:340145-340187:1:exon
so has part: feature:341738-341787:1:exon
so has part: feature:344304-344448:1:exon
so has part: feature:350175-350293:1:exon
so has part: feature:350381-350472:1:exon
so has part: feature:350580-350696:1:exon
so has part: feature:352363-352533:1:exon
so has part: feature:353612-353720:1:exon
so has part: feature:359362-359532:1:exon
so has part: feature:361473-361640:1:exon
so has part: feature:361963-362100:1:exon
so has part: feature:362791-362811:1:exon

XP_021070978.1
type: Protein
SIO_000068: ncbiprotein

position:318074:1
position: 318074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362811:1
position: 362811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318074-318183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339567-339702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340145-340187:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:341738-341787:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344304-344448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350175-350293:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:350381-350472:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:350580-350696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:352363-352533:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:353612-353720:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:359362-359532:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:361473-361640:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:361963-362100:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:362791-362811:1:exon

Nmt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Nmt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycylpeptide N-tetradecanoyltransferase 2 isoform X2
translation: MAEDSESAASQQSLELDDQDTCGIDGDNEEETEHAKGSPGGDLGAKKKKKKQKRKKEKPNSGGTKSDSASDSQEIKIQQSSKNPTIPIQKLQDIQRAMELLSACQGPARNIDEATKRRYQFWDTQPVPKLNEVITSHGAIEPDKDNIRQEPYSLPQGFMWDTLDLSNAEVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNRKLVGFISAIPANIRIYDSVKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLPKPVATCRYWHRSLNPRKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPMEPKDIKAVRELINVYLKQFHLAPVMNDQEVAHWFLPREHIIDTFVVENPSGKLTDFLSFYTLPSTVMHHPAHKSLKAAYSFYNIHTETPLLDLMNDALIIAKLKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWRCPGTDSEKVGLVLQ
SIO_010081: Nmt2
subclass of: SO_0000673
so part of: Nmt2
location: join(318074..318183,339567..339702,344304..344448,350175..350293,350381..350472,350580..350696,352363..352533,353612..353720,359362..359532,361473..361640,361963..362100,362791..362811)
location: region:318074-362811:1
so has part: feature:318074-318183:1:exon
so has part: feature:339567-339702:1:exon
so has part: feature:344304-344448:1:exon
so has part: feature:350175-350293:1:exon
so has part: feature:350381-350472:1:exon
so has part: feature:350580-350696:1:exon
so has part: feature:352363-352533:1:exon
so has part: feature:353612-353720:1:exon
so has part: feature:359362-359532:1:exon
so has part: feature:361473-361640:1:exon
so has part: feature:361963-362100:1:exon
so has part: feature:362791-362811:1:exon

XP_021070979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318074-318183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339567-339702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344304-344448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350175-350293:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350381-350472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350580-350696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:352363-352533:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:353612-353720:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:359362-359532:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:361473-361640:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:361963-362100:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:362791-362811:1:exon

Nmt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Nmt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycylpeptide N-tetradecanoyltransferase 2 isoform X3
translation: MRRRPNTPKEALEGIWEQKRKRRNRREKRRSQILGVPSPTLHLTPRRLRFSSLLNTTPSGSRFQQEQPWNPTIPIQKLQDIQRAMELLSACQGPARNIDEATKRRYQFWDTQPVPKLNEVITSHGAIEPDKDNIRQEPYSLPQGFMWDTLDLSNAEVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNRKLVGFISAIPANIRIYDSVKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLPKPVATCRYWHRSLNPRKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPMEPKDIKAVRELINVYLKQFHLAPVMNDQEVAHWFLPREHIIDTFVVENPSGKLTDFLSFYTLPSTVMHHPAHKSLKAAYSFYNIHTETPLLDLMNDALIIAKLKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWRCPGTDSEKVGLVLQ
SIO_010081: Nmt2
subclass of: SO_0000673
so part of: Nmt2
location: join(318156..318183,339567..339702,340145..340187,344304..344448,350175..350293,350381..350472,350580..350696,352363..352533,353612..353720,359362..359532,361473..361640,361963..362100,362791..362811)
location: region:318156-362811:1
so has part: feature:318156-318183:1:exon
so has part: feature:339567-339702:1:exon
so has part: feature:340145-340187:1:exon
so has part: feature:344304-344448:1:exon
so has part: feature:350175-350293:1:exon
so has part: feature:350381-350472:1:exon
so has part: feature:350580-350696:1:exon
so has part: feature:352363-352533:1:exon
so has part: feature:353612-353720:1:exon
so has part: feature:359362-359532:1:exon
so has part: feature:361473-361640:1:exon
so has part: feature:361963-362100:1:exon
so has part: feature:362791-362811:1:exon

XP_021070981.1
type: Protein
SIO_000068: ncbiprotein

position:318156:1
position: 318156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318156-318183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339567-339702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340145-340187:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344304-344448:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350175-350293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350381-350472:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:350580-350696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352363-352533:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:353612-353720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:359362-359532:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:361473-361640:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:361963-362100:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:362791-362811:1:exon

LOC115065643
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115065643
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(325097..325237)
location: region:325097-325237:-1
so has part: feature:325097-325237:-1:exon
subclass of: SO_0000623

115065643
type: Gene
SIO_000068: ncbigene

position:325097:-1
position: 325097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325237:-1
position: 325237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325097-325237:-1:exon

LOC115065643
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snRNA
gene: LOC115065643
product: U4 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003845413.1
SIO_010081: LOC115065643
subclass of: SO_0000673
so part of: LOC115065643
location: complement(325097..325237)
location: region:325097-325237:-1
so has part: feature:325097-325237:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:325097-325237:-1:exon

Rpp38
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Rpp38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(365620..369380)
location: region:365620-369380:-1
so has part: feature:365620-369380:-1:exon
subclass of: SO_0000010

110334060
type: Gene
SIO_000068: ncbigene

position:365620:-1
position: 365620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369380:-1
position: 369380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365620-369380:-1:exon

Rpp38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Rpp38
product: ribonuclease P/MRP subunit p38, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021215904.2
SIO_010081: Rpp38
subclass of: SO_0000673
so part of: Rpp38
location: complement(join(365620..366544,369199..369380))
location: region:365620-369380:-1
so has part: feature:369199-369380:-1:exon
so has part: feature:365620-366544:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:369199-369380:-1:exon

position:369199:-1
position: 369199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:365620-366544:-1:exon

position:366544:-1
position: 366544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rpp38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Rpp38
product: ribonuclease P/MRP subunit p38, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029547415.1
SIO_010081: Rpp38
subclass of: SO_0000673
so part of: Rpp38
location: complement(join(365631..366544,368212..368270,369199..369380))
location: region:365631-369380:-1
so has part: feature:369199-369380:-1:exon
so has part: feature:368212-368270:-1:exon
so has part: feature:365631-366544:-1:exon

position:365631:-1
position: 365631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369199-369380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:368212-368270:-1:exon

position:368212:-1
position: 368212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368270:-1
position: 368270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:365631-366544:-1:exon

Rpp38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Rpp38
product: ribonuclease P/MRP subunit p38, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029547416.1
SIO_010081: Rpp38
subclass of: SO_0000673
so part of: Rpp38
location: complement(join(365631..366544,368212..368270,368959..369172))
location: region:365631-369172:-1
so has part: feature:368959-369172:-1:exon
so has part: feature:368212-368270:-1:exon
so has part: feature:365631-366544:-1:exon

position:369172:-1
position: 369172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368959-369172:-1:exon

position:368959:-1
position: 368959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:368212-368270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365631-366544:-1:exon

Rpp38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Rpp38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease P protein subunit p38
translation: MAAAPQAPKRGSIRKTRPLVVKTSLNNPYVISWSTLEREDIHFILQTLEDKFKSIGLQKIEDKKKRKKTALMKKQSCGSDVGISEDPKEPDGDLLVSGWTPVHVRRQLVIGVNEVTRALERNELLLVLVCKSVKPAIITSHLIQLSLSRTVPACQVPQLSERIAPVIGLKCVLALGFRKNTRDFADEVGAIIPRVPSLNVPWLPDRTQDPTDILETEPLESQDTEILDTSFDDLTKLSKRKLAEGGQASAATLQPLKIKKLIPNPSKIRKPPKSKKSISK
SIO_010081: Rpp38
subclass of: SO_0000673
so part of: Rpp38
location: complement(365692..366534)
location: region:365692-366534:-1
so has part: feature:365692-366534:-1:exon

XP_021071563.1
type: Protein
SIO_000068: ncbiprotein

position:365692:-1
position: 365692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366534:-1
position: 366534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365692-366534:-1:exon

Rpp38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Rpp38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease P protein subunit p38
translation: MAAAPQAPKRGSIRKTRPLVVKTSLNNPYVISWSTLEREDIHFILQTLEDKFKSIGLQKIEDKKKRKKTALMKKQSCGSDVGISEDPKEPDGDLLVSGWTPVHVRRQLVIGVNEVTRALERNELLLVLVCKSVKPAIITSHLIQLSLSRTVPACQVPQLSERIAPVIGLKCVLALGFRKNTRDFADEVGAIIPRVPSLNVPWLPDRTQDPTDILETEPLESQDTEILDTSFDDLTKLSKRKLAEGGQASAATLQPLKIKKLIPNPSKIRKPPKSKKSISK
SIO_010081: Rpp38
subclass of: SO_0000673
so part of: Rpp38
location: complement(365692..366534)
location: region:365692-366534:-1
so has part: feature:365692-366534:-1:exon

XP_029403275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365692-366534:-1:exon

Rpp38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Rpp38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease P protein subunit p38
translation: MAAAPQAPKRGSIRKTRPLVVKTSLNNPYVISWSTLEREDIHFILQTLEDKFKSIGLQKIEDKKKRKKTALMKKQSCGSDVGISEDPKEPDGDLLVSGWTPVHVRRQLVIGVNEVTRALERNELLLVLVCKSVKPAIITSHLIQLSLSRTVPACQVPQLSERIAPVIGLKCVLALGFRKNTRDFADEVGAIIPRVPSLNVPWLPDRTQDPTDILETEPLESQDTEILDTSFDDLTKLSKRKLAEGGQASAATLQPLKIKKLIPNPSKIRKPPKSKKSISK
SIO_010081: Rpp38
subclass of: SO_0000673
so part of: Rpp38
location: complement(365692..366534)
location: region:365692-366534:-1
so has part: feature:365692-366534:-1:exon

XP_029403276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365692-366534:-1:exon

Acbd7
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Acbd7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 372590..378141
location: region:372590-378141:1
so has part: feature:372590-378141:1:exon
subclass of: SO_0000010

110334193
type: Gene
SIO_000068: ncbigene

position:372590:1
position: 372590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378141:1
position: 378141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372590-378141:1:exon

Acbd7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Acbd7
product: acyl-CoA binding domain containing 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021216057.1
SIO_010081: Acbd7
subclass of: SO_0000673
so part of: Acbd7
location: join(372590..372636,377476..377593,377689..377751,377837..378141)
location: region:372590-378141:1
so has part: feature:372590-372636:1:exon
so has part: feature:377476-377593:1:exon
so has part: feature:377689-377751:1:exon
so has part: feature:377837-378141:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:372590-372636:1:exon

position:372636:1
position: 372636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:377476-377593:1:exon

position:377476:1
position: 377476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377593:1
position: 377593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:377689-377751:1:exon

position:377689:1
position: 377689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377751:1
position: 377751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:377837-378141:1:exon

position:377837:1
position: 377837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Acbd7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Acbd7
product: acyl-CoA binding domain containing 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029547642.1
SIO_010081: Acbd7
subclass of: SO_0000673
so part of: Acbd7
location: join(372625..372636,377476..377596,377689..377751,377837..377986)
location: region:372625-377986:1
so has part: feature:372625-372636:1:exon
so has part: feature:377476-377596:1:exon
so has part: feature:377689-377751:1:exon
so has part: feature:377837-377986:1:exon

position:372625:1
position: 372625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377986:1
position: 377986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372625-372636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:377476-377596:1:exon

position:377596:1
position: 377596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:377689-377751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377837-377986:1:exon

Acbd7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Acbd7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-CoA-binding domain-containing protein 7 isoform X1
translation: MSLQADFDQAAQDVRKLKSRPEDEELKELYGLYKQSVIGDINIGACPAMLDLKGKAKWEAWNLQKGLSKEDAMCAYISKARELIEKYGI
SIO_010081: Acbd7
subclass of: SO_0000673
so part of: Acbd7
location: join(372625..372636,377476..377596,377689..377751,377837..377910)
location: region:372625-377910:1
so has part: feature:372625-372636:1:exon
so has part: feature:377476-377596:1:exon
so has part: feature:377689-377751:1:exon
so has part: feature:377837-377910:1:exon

XP_029403502.1
type: Protein
SIO_000068: ncbiprotein

position:377910:1
position: 377910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372625-372636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:377476-377596:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377689-377751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377837-377910:1:exon

Acbd7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Acbd7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-CoA-binding domain-containing protein 7 isoform X2
translation: MSLQADFDQAAQDVRKLKSRPEDEELKELYGLYKQSVIGDINIACPAMLDLKGKAKWEAWNLQKGLSKEDAMCAYISKARELIEKYGI
SIO_010081: Acbd7
subclass of: SO_0000673
so part of: Acbd7
location: join(372625..372636,377476..377593,377689..377751,377837..377910)
location: region:372625-377910:1
so has part: feature:372625-372636:1:exon
so has part: feature:377476-377593:1:exon
so has part: feature:377689-377751:1:exon
so has part: feature:377837-377910:1:exon

XP_021071716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372625-372636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:377476-377593:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377689-377751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377837-377910:1:exon

Olah
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Olah
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(379129..430571)
location: region:379129-430571:-1
so has part: feature:379129-430571:-1:exon
subclass of: SO_0000010

110334162
type: Gene
SIO_000068: ncbigene

position:379129:-1
position: 379129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430571:-1
position: 430571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379129-430571:-1:exon

Olah
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Olah
product: oleoyl-ACP hydrolase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins
transcript id: XM_021216023.1
SIO_010081: Olah
subclass of: SO_0000673
so part of: Olah
location: complement(join(379129..379694,380061..380143,384081..384250,384694..384793,386152..386290,399030..399160,402948..403137,404162..404335,430367..430571))
location: region:379129-430571:-1
so has part: feature:430367-430571:-1:exon
so has part: feature:404162-404335:-1:exon
so has part: feature:402948-403137:-1:exon
so has part: feature:399030-399160:-1:exon
so has part: feature:386152-386290:-1:exon
so has part: feature:384694-384793:-1:exon
so has part: feature:384081-384250:-1:exon
so has part: feature:380061-380143:-1:exon
so has part: feature:379129-379694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430367-430571:-1:exon

position:430367:-1
position: 430367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:404162-404335:-1:exon

position:404162:-1
position: 404162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404335:-1
position: 404335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:402948-403137:-1:exon

position:402948:-1
position: 402948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403137:-1
position: 403137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:399030-399160:-1:exon

position:399030:-1
position: 399030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399160:-1
position: 399160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:386152-386290:-1:exon

position:386152:-1
position: 386152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386290:-1
position: 386290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:384694-384793:-1:exon

position:384694:-1
position: 384694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384793:-1
position: 384793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:384081-384250:-1:exon

position:384081:-1
position: 384081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384250:-1
position: 384250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:380061-380143:-1:exon

position:380061:-1
position: 380061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380143:-1
position: 380143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:379129-379694:-1:exon

position:379694:-1
position: 379694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Olah
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Olah
product: oleoyl-ACP hydrolase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins
transcript id: XM_021216024.1
SIO_010081: Olah
subclass of: SO_0000673
so part of: Olah
location: complement(join(379137..379694,380061..380143,384081..384250,384694..384793,386152..386290,399030..399160,402948..403134,404162..404326))
location: region:379137-404326:-1
so has part: feature:404162-404326:-1:exon
so has part: feature:402948-403134:-1:exon
so has part: feature:399030-399160:-1:exon
so has part: feature:386152-386290:-1:exon
so has part: feature:384694-384793:-1:exon
so has part: feature:384081-384250:-1:exon
so has part: feature:380061-380143:-1:exon
so has part: feature:379137-379694:-1:exon

position:379137:-1
position: 379137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404326:-1
position: 404326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404162-404326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:402948-403134:-1:exon

position:403134:-1
position: 403134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:399030-399160:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:386152-386290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384694-384793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:384081-384250:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380061-380143:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:379137-379694:-1:exon

Olah
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Olah
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-acyl fatty acid synthase thioesterase, medium chain
translation: METAVYAKRTRNEKVLNCLYQQPDALFKLICFPWAGGGSVHFAKWGQKINGLLEVHAVRLAGRETRLQEPFSNDIYQIAEEIVAALLPIIRDKAFAFFGHSLGSYIAFITALHLKEKYKMEPLHIFVSSASAPHSVSRPQVPDVNKLSEEQIRDHLLIFGGTPKHLIQDQDFLRQFIPLLKADVDIVKKFIFDKPSKALLSRDITCFIGSEDVIKDIEGWKDITSGNFDVHKLPGDHFYLMEPDNEDFIKNYIAKCLELSSLDCF
SIO_010081: Olah
subclass of: SO_0000673
so part of: Olah
location: complement(join(379552..379694,380061..380143,384081..384250,384694..384793,386152..386290,399030..399160,402948..402979))
location: region:379552-402979:-1
so has part: feature:402948-402979:-1:exon
so has part: feature:399030-399160:-1:exon
so has part: feature:386152-386290:-1:exon
so has part: feature:384694-384793:-1:exon
so has part: feature:384081-384250:-1:exon
so has part: feature:380061-380143:-1:exon
so has part: feature:379552-379694:-1:exon

XP_021071682.1
type: Protein
SIO_000068: ncbiprotein

position:379552:-1
position: 379552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402979:-1
position: 402979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402948-402979:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399030-399160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386152-386290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384694-384793:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384081-384250:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380061-380143:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:379552-379694:-1:exon

Olah
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Olah
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-acyl fatty acid synthase thioesterase, medium chain
translation: METAVYAKRTRNEKVLNCLYQQPDALFKLICFPWAGGGSVHFAKWGQKINGLLEVHAVRLAGRETRLQEPFSNDIYQIAEEIVAALLPIIRDKAFAFFGHSLGSYIAFITALHLKEKYKMEPLHIFVSSASAPHSVSRPQVPDVNKLSEEQIRDHLLIFGGTPKHLIQDQDFLRQFIPLLKADVDIVKKFIFDKPSKALLSRDITCFIGSEDVIKDIEGWKDITSGNFDVHKLPGDHFYLMEPDNEDFIKNYIAKCLELSSLDCF
SIO_010081: Olah
subclass of: SO_0000673
so part of: Olah
location: complement(join(379552..379694,380061..380143,384081..384250,384694..384793,386152..386290,399030..399160,402948..402979))
location: region:379552-402979:-1
so has part: feature:402948-402979:-1:exon
so has part: feature:399030-399160:-1:exon
so has part: feature:386152-386290:-1:exon
so has part: feature:384694-384793:-1:exon
so has part: feature:384081-384250:-1:exon
so has part: feature:380061-380143:-1:exon
so has part: feature:379552-379694:-1:exon

XP_021071683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402948-402979:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399030-399160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386152-386290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384694-384793:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384081-384250:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380061-380143:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:379552-379694:-1:exon

Meig1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Meig1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(441315..455260)
location: region:441315-455260:-1
so has part: feature:441315-455260:-1:exon
subclass of: SO_0000010

110334202
type: Gene
SIO_000068: ncbigene

position:441315:-1
position: 441315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455260:-1
position: 455260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441315-455260:-1:exon

Meig1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Meig1
product: meiosis/spermiogenesis associated 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 Proteins
transcript id: XM_021216070.1
SIO_010081: Meig1
subclass of: SO_0000673
so part of: Meig1
location: complement(join(441315..441599,444079..444245,455000..455260))
location: region:441315-455260:-1
so has part: feature:455000-455260:-1:exon
so has part: feature:444079-444245:-1:exon
so has part: feature:441315-441599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:455000-455260:-1:exon

position:455000:-1
position: 455000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:444079-444245:-1:exon

position:444079:-1
position: 444079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444245:-1
position: 444245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:441315-441599:-1:exon

position:441599:-1
position: 441599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Meig1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Meig1
product: meiosis/spermiogenesis associated 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins
transcript id: XM_029547612.1
SIO_010081: Meig1
subclass of: SO_0000673
so part of: Meig1
location: complement(join(441315..441599,444079..444245,445679..445826,455000..455260))
location: region:441315-455260:-1
so has part: feature:455000-455260:-1:exon
so has part: feature:445679-445826:-1:exon
so has part: feature:444079-444245:-1:exon
so has part: feature:441315-441599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:455000-455260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445679-445826:-1:exon

position:445679:-1
position: 445679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445826:-1
position: 445826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:444079-444245:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:441315-441599:-1:exon

Meig1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Meig1
product: meiosis/spermiogenesis associated 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins
transcript id: XM_029547611.1
SIO_010081: Meig1
subclass of: SO_0000673
so part of: Meig1
location: complement(join(441315..441599,444079..444245,445679..445826,451675..451833))
location: region:441315-451833:-1
so has part: feature:451675-451833:-1:exon
so has part: feature:445679-445826:-1:exon
so has part: feature:444079-444245:-1:exon
so has part: feature:441315-441599:-1:exon

position:451833:-1
position: 451833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451675-451833:-1:exon

position:451675:-1
position: 451675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:445679-445826:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444079-444245:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:441315-441599:-1:exon

Meig1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Meig1
product: meiosis/spermiogenesis associated 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 6 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021216069.2
SIO_010081: Meig1
subclass of: SO_0000673
so part of: Meig1
location: complement(join(441315..441599,444079..444245,451675..451827))
location: region:441315-451827:-1
so has part: feature:451675-451827:-1:exon
so has part: feature:444079-444245:-1:exon
so has part: feature:441315-441599:-1:exon

position:451827:-1
position: 451827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451675-451827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:444079-444245:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:441315-441599:-1:exon

Meig1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Meig1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis expressed gene 1 protein homolog
translation: MATSDVKPKSISRAKKWSEEIENLYRFQQAGYRDEIEYKQVKQVAMVDRWPETGYVKKLQRRDNTFYYYNKQRECEDKEVHKVKVYAY
SIO_010081: Meig1
subclass of: SO_0000673
so part of: Meig1
location: complement(join(441471..441599,444079..444216))
location: region:441471-444216:-1
so has part: feature:444079-444216:-1:exon
so has part: feature:441471-441599:-1:exon

XP_021071728.1
type: Protein
SIO_000068: ncbiprotein

position:441471:-1
position: 441471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444216:-1
position: 444216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444079-444216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441471-441599:-1:exon

Meig1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Meig1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis expressed gene 1 protein homolog
translation: MATSDVKPKSISRAKKWSEEIENLYRFQQAGYRDEIEYKQVKQVAMVDRWPETGYVKKLQRRDNTFYYYNKQRECEDKEVHKVKVYAY
SIO_010081: Meig1
subclass of: SO_0000673
so part of: Meig1
location: complement(join(441471..441599,444079..444216))
location: region:441471-444216:-1
so has part: feature:444079-444216:-1:exon
so has part: feature:441471-441599:-1:exon

XP_021071729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444079-444216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441471-441599:-1:exon

Meig1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Meig1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis expressed gene 1 protein homolog
translation: MATSDVKPKSISRAKKWSEEIENLYRFQQAGYRDEIEYKQVKQVAMVDRWPETGYVKKLQRRDNTFYYYNKQRECEDKEVHKVKVYAY
SIO_010081: Meig1
subclass of: SO_0000673
so part of: Meig1
location: complement(join(441471..441599,444079..444216))
location: region:441471-444216:-1
so has part: feature:444079-444216:-1:exon
so has part: feature:441471-441599:-1:exon

XP_029403471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444079-444216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441471-441599:-1:exon

Meig1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Meig1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis expressed gene 1 protein homolog
translation: MATSDVKPKSISRAKKWSEEIENLYRFQQAGYRDEIEYKQVKQVAMVDRWPETGYVKKLQRRDNTFYYYNKQRECEDKEVHKVKVYAY
SIO_010081: Meig1
subclass of: SO_0000673
so part of: Meig1
location: complement(join(441471..441599,444079..444216))
location: region:441471-444216:-1
so has part: feature:444079-444216:-1:exon
so has part: feature:441471-441599:-1:exon

XP_029403472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444079-444216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441471-441599:-1:exon

Dclre1c
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Dclre1c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 456951..486490
location: region:456951-486490:1
so has part: feature:456951-486490:1:exon
subclass of: SO_0000010

110333641
type: Gene
SIO_000068: ncbigene

position:456951:1
position: 456951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486490:1
position: 486490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456951-486490:1:exon

Dclre1c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Dclre1c
product: DNA cross-link repair 1C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021215299.2
SIO_010081: Dclre1c
subclass of: SO_0000673
so part of: Dclre1c
location: join(456951..457097,458085..458136,461683..461767,464998..465057,468156..468211,468701..468802,469622..469694,469949..470089,473431..473532,476099..476235,476748..476802,479940..480028,482901..482995,485548..486490)
location: region:456951-486490:1
so has part: feature:456951-457097:1:exon
so has part: feature:458085-458136:1:exon
so has part: feature:461683-461767:1:exon
so has part: feature:464998-465057:1:exon
so has part: feature:468156-468211:1:exon
so has part: feature:468701-468802:1:exon
so has part: feature:469622-469694:1:exon
so has part: feature:469949-470089:1:exon
so has part: feature:473431-473532:1:exon
so has part: feature:476099-476235:1:exon
so has part: feature:476748-476802:1:exon
so has part: feature:479940-480028:1:exon
so has part: feature:482901-482995:1:exon
so has part: feature:485548-486490:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:456951-457097:1:exon

position:457097:1
position: 457097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:458085-458136:1:exon

position:458085:1
position: 458085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458136:1
position: 458136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:461683-461767:1:exon

position:461683:1
position: 461683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461767:1
position: 461767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:464998-465057:1:exon

position:464998:1
position: 464998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465057:1
position: 465057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:468156-468211:1:exon

position:468156:1
position: 468156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468211:1
position: 468211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:468701-468802:1:exon

position:468701:1
position: 468701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468802:1
position: 468802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:469622-469694:1:exon

position:469622:1
position: 469622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469694:1
position: 469694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:469949-470089:1:exon

position:469949:1
position: 469949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470089:1
position: 470089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:473431-473532:1:exon

position:473431:1
position: 473431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473532:1
position: 473532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:476099-476235:1:exon

position:476099:1
position: 476099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476235:1
position: 476235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:476748-476802:1:exon

position:476748:1
position: 476748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476802:1
position: 476802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:479940-480028:1:exon

position:479940:1
position: 479940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480028:1
position: 480028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:482901-482995:1:exon

position:482901:1
position: 482901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482995:1
position: 482995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:485548-486490:1:exon

position:485548:1
position: 485548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Dclre1c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Dclre1c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein artemis isoform X1
translation: MSSFQGQMAEYPTISIDRFDRENLKARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKELLLTSPKYRFWENRIIAIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSNGTVLYTGDFRLAKGEASRMELLHSGGRVKDIHSVYLDTTFCDPRFYQIPSREQCLRGILELVRSWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDKLDMFKNMPDILHHLTTDRNTQIHACRHPKAEECFQWNKLPCGITSQNKTALHIISIKPSTMWFGERTRKTNVIVRTGESSYRACFSFHSSFSEIKDFLSYICPVNAYPNVIPVGLTVDKVMDVLKPLCRSSQSAEPKYKPLGKLKRARTIHLDSEEDEDLFDDPLPTPLRHKVPYQLTLHPEVFSMKALPLDQPELRQSPGGCRAESMRSPLANFIDCEESNSDSEEELETPPSLQGGLGPETLLQQNADPDVDIPQWEVFFKRKDEITDECLENLPSSIETGGSQSPKLFSDSPKLCSDSEDSTHISSQNSSQSTHITDQGSQGWDSQCDTVLLSSQEKSGGDSTSLNKGVYKPKVKESIGASQIEQDAPCPQDTHCDLKSRAEVNGAPCIVELDTLSGRKSLPEKTLLSSTHTDSQSSSDFEIPSTPEAELPTPEHLQFLYGKLATGQSIVVEKRKCSLLDS
SIO_010081: Dclre1c
subclass of: SO_0000673
so part of: Dclre1c
location: join(456989..457097,458085..458136,461683..461767,464998..465057,468156..468211,468701..468802,469622..469694,469949..470089,473431..473532,476099..476235,476748..476802,479940..480028,482901..482995,485548..486479)
location: region:456989-486479:1
so has part: feature:456989-457097:1:exon
so has part: feature:458085-458136:1:exon
so has part: feature:461683-461767:1:exon
so has part: feature:464998-465057:1:exon
so has part: feature:468156-468211:1:exon
so has part: feature:468701-468802:1:exon
so has part: feature:469622-469694:1:exon
so has part: feature:469949-470089:1:exon
so has part: feature:473431-473532:1:exon
so has part: feature:476099-476235:1:exon
so has part: feature:476748-476802:1:exon
so has part: feature:479940-480028:1:exon
so has part: feature:482901-482995:1:exon
so has part: feature:485548-486479:1:exon

XP_021070958.1
type: Protein
SIO_000068: ncbiprotein

position:456989:1
position: 456989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486479:1
position: 486479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456989-457097:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458085-458136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:461683-461767:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464998-465057:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:468156-468211:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468701-468802:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469622-469694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:469949-470089:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:473431-473532:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:476099-476235:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:476748-476802:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479940-480028:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:482901-482995:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:485548-486479:1:exon

Dclre1c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Dclre1c
product: DNA cross-link repair 1C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029547506.1
SIO_010081: Dclre1c
subclass of: SO_0000673
so part of: Dclre1c
location: join(461739..461767,464998..465057,468701..468802,469622..469694,469949..470089,473431..473532,476099..476235,476748..476802,479940..480028,482901..482995,485548..486490)
location: region:461739-486490:1
so has part: feature:461739-461767:1:exon
so has part: feature:464998-465057:1:exon
so has part: feature:468701-468802:1:exon
so has part: feature:469622-469694:1:exon
so has part: feature:469949-470089:1:exon
so has part: feature:473431-473532:1:exon
so has part: feature:476099-476235:1:exon
so has part: feature:476748-476802:1:exon
so has part: feature:479940-480028:1:exon
so has part: feature:482901-482995:1:exon
so has part: feature:485548-486490:1:exon

position:461739:1
position: 461739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461739-461767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464998-465057:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468701-468802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:469622-469694:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:469949-470089:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473431-473532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476099-476235:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:476748-476802:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:479940-480028:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:482901-482995:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:485548-486490:1:exon

Dclre1c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Dclre1c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein artemis isoform X2
translation: MRHRVRFLFQGSNGTVLYTGDFRLAKGEASRMELLHSGGRVKDIHSVYLDTTFCDPRFYQIPSREQCLRGILELVRSWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDKLDMFKNMPDILHHLTTDRNTQIHACRHPKAEECFQWNKLPCGITSQNKTALHIISIKPSTMWFGERTRKTNVIVRTGESSYRACFSFHSSFSEIKDFLSYICPVNAYPNVIPVGLTVDKVMDVLKPLCRSSQSAEPKYKPLGKLKRARTIHLDSEEDEDLFDDPLPTPLRHKVPYQLTLHPEVFSMKALPLDQPELRQSPGGCRAESMRSPLANFIDCEESNSDSEEELETPPSLQGGLGPETLLQQNADPDVDIPQWEVFFKRKDEITDECLENLPSSIETGGSQSPKLFSDSPKLCSDSEDSTHISSQNSSQSTHITDQGSQGWDSQCDTVLLSSQEKSGGDSTSLNKGVYKPKVKESIGASQIEQDAPCPQDTHCDLKSRAEVNGAPCIVELDTLSGRKSLPEKTLLSSTHTDSQSSSDFEIPSTPEAELPTPEHLQFLYGKLATGQSIVVEKRKCSLLDS
SIO_010081: Dclre1c
subclass of: SO_0000673
so part of: Dclre1c
location: join(465041..465057,468701..468802,469622..469694,469949..470089,473431..473532,476099..476235,476748..476802,479940..480028,482901..482995,485548..486479)
location: region:465041-486479:1
so has part: feature:465041-465057:1:exon
so has part: feature:468701-468802:1:exon
so has part: feature:469622-469694:1:exon
so has part: feature:469949-470089:1:exon
so has part: feature:473431-473532:1:exon
so has part: feature:476099-476235:1:exon
so has part: feature:476748-476802:1:exon
so has part: feature:479940-480028:1:exon
so has part: feature:482901-482995:1:exon
so has part: feature:485548-486479:1:exon

XP_029403366.1
type: Protein
SIO_000068: ncbiprotein

position:465041:1
position: 465041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465041-465057:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:468701-468802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:469622-469694:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:469949-470089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473431-473532:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476099-476235:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476748-476802:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:479940-480028:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:482901-482995:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485548-486479:1:exon

Suv39h2
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Suv39h2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(490228..507692)
location: region:490228-507692:-1
so has part: feature:490228-507692:-1:exon
subclass of: SO_0000010

110333642
type: Gene
SIO_000068: ncbigene

position:490228:-1
position: 490228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507692:-1
position: 507692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490228-507692:-1:exon

Suv39h2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Suv39h2
product: suppressor of variegation 3-9 homolog 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021215302.2
SIO_010081: Suv39h2
subclass of: SO_0000673
so part of: Suv39h2
location: complement(join(490228..491360,492403..492532,495153..495299,497169..497837,505256..505401,507422..507692))
location: region:490228-507692:-1
so has part: feature:507422-507692:-1:exon
so has part: feature:505256-505401:-1:exon
so has part: feature:497169-497837:-1:exon
so has part: feature:495153-495299:-1:exon
so has part: feature:492403-492532:-1:exon
so has part: feature:490228-491360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507422-507692:-1:exon

position:507422:-1
position: 507422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:505256-505401:-1:exon

position:505256:-1
position: 505256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505401:-1
position: 505401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:497169-497837:-1:exon

position:497169:-1
position: 497169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497837:-1
position: 497837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:495153-495299:-1:exon

position:495153:-1
position: 495153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495299:-1
position: 495299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:492403-492532:-1:exon

position:492403:-1
position: 492403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492532:-1
position: 492532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:490228-491360:-1:exon

position:491360:-1
position: 491360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Suv39h2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Suv39h2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SUV39H2
translation: MAAARAEARGREAAARCHRAPGPPPRPKARRTARRRRADTLTARRSPPAAGSQRARSGARRAAVFGDECARGAFFKAWCVPCLVSLDTLQELCRKEKLTCKSIGITKRNLNNYEVEYLCDYKVAKGVEYYLVKWKGWPDSTNTWEPLRNLRCPQLLRQFSDDKNTYLSQERKCKAVTTKGNKFLQPAIAEYIVQKAKQRIALQRWQDYLNRRKNHKGMIFVENTVDLEGPPLDFYYINEYRPAPGISINSEATFGCSCSDCFFEKCCPAEAGVVLAYNKKQQIKIQPGTPIYECNSRCRCGPDCPNRIVQKGTQYSLCIFRTSNGCGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQFYDNKGITYLFDLDYESDEFTVDAARYGNVSHFVNHSCDPNLQVFSVFIDNLDTRLPRIALFSTRTIKAGEELTFDYQMKGSGETSSDSIDHSPAKKRVRTECKCGAETCRGYLN
SIO_010081: Suv39h2
subclass of: SO_0000673
so part of: Suv39h2
location: complement(join(491254..491360,492403..492532,495153..495299,497169..497837,505256..505401,507422..507650))
location: region:491254-507650:-1
so has part: feature:507422-507650:-1:exon
so has part: feature:505256-505401:-1:exon
so has part: feature:497169-497837:-1:exon
so has part: feature:495153-495299:-1:exon
so has part: feature:492403-492532:-1:exon
so has part: feature:491254-491360:-1:exon

XP_021070961.1
type: Protein
SIO_000068: ncbiprotein

position:491254:-1
position: 491254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507650:-1
position: 507650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507422-507650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505256-505401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497169-497837:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:495153-495299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492403-492532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:491254-491360:-1:exon

Hspa14
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Hspa14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(517041..540978)
location: region:517041-540978:-1
so has part: feature:517041-540978:-1:exon
subclass of: SO_0000010

110333785
type: Gene
SIO_000068: ncbigene

position:517041:-1
position: 517041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540978:-1
position: 540978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517041-540978:-1:exon

Hspa14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Hspa14
product: heat shock protein family A (Hsp70) member 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021215498.2
SIO_010081: Hspa14
subclass of: SO_0000673
so part of: Hspa14
location: complement(join(517041..517251,517895..517965,519227..519400,519782..519994,522609..522711,525175..525330,526226..526387,527332..527436,529386..529476,530724..530829,530965..531013,539135..539217,539301..539381,540730..540953))
location: region:517041-540953:-1
so has part: feature:540730-540953:-1:exon
so has part: feature:539301-539381:-1:exon
so has part: feature:539135-539217:-1:exon
so has part: feature:530965-531013:-1:exon
so has part: feature:530724-530829:-1:exon
so has part: feature:529386-529476:-1:exon
so has part: feature:527332-527436:-1:exon
so has part: feature:526226-526387:-1:exon
so has part: feature:525175-525330:-1:exon
so has part: feature:522609-522711:-1:exon
so has part: feature:519782-519994:-1:exon
so has part: feature:519227-519400:-1:exon
so has part: feature:517895-517965:-1:exon
so has part: feature:517041-517251:-1:exon

position:540953:-1
position: 540953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540730-540953:-1:exon

position:540730:-1
position: 540730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:539301-539381:-1:exon

position:539301:-1
position: 539301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539381:-1
position: 539381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:539135-539217:-1:exon

position:539135:-1
position: 539135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539217:-1
position: 539217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:530965-531013:-1:exon

position:530965:-1
position: 530965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531013:-1
position: 531013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:530724-530829:-1:exon

position:530724:-1
position: 530724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530829:-1
position: 530829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:529386-529476:-1:exon

position:529386:-1
position: 529386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529476:-1
position: 529476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:527332-527436:-1:exon

position:527332:-1
position: 527332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527436:-1
position: 527436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:526226-526387:-1:exon

position:526226:-1
position: 526226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526387:-1
position: 526387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:525175-525330:-1:exon

position:525175:-1
position: 525175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525330:-1
position: 525330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:522609-522711:-1:exon

position:522609:-1
position: 522609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522711:-1
position: 522711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:519782-519994:-1:exon

position:519782:-1
position: 519782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519994:-1
position: 519994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:519227-519400:-1:exon

position:519227:-1
position: 519227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519400:-1
position: 519400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:517895-517965:-1:exon

position:517895:-1
position: 517895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517965:-1
position: 517965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:517041-517251:-1:exon

position:517251:-1
position: 517251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hspa14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Hspa14
product: heat shock protein family A (Hsp70) member 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029547555.1
SIO_010081: Hspa14
subclass of: SO_0000673
so part of: Hspa14
location: complement(join(517041..517251,517895..517965,519227..519400,519782..519994,522609..522711,525175..525330,526226..526387,527332..527436,529386..529476,530724..530829,530965..531013,539301..539380))
location: region:517041-539380:-1
so has part: feature:539301-539380:-1:exon
so has part: feature:530965-531013:-1:exon
so has part: feature:530724-530829:-1:exon
so has part: feature:529386-529476:-1:exon
so has part: feature:527332-527436:-1:exon
so has part: feature:526226-526387:-1:exon
so has part: feature:525175-525330:-1:exon
so has part: feature:522609-522711:-1:exon
so has part: feature:519782-519994:-1:exon
so has part: feature:519227-519400:-1:exon
so has part: feature:517895-517965:-1:exon
so has part: feature:517041-517251:-1:exon

position:539380:-1
position: 539380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539301-539380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:530965-531013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:530724-530829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529386-529476:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527332-527436:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:526226-526387:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:525175-525330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522609-522711:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:519782-519994:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:519227-519400:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:517895-517965:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:517041-517251:-1:exon

Hspa14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Hspa14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 14 isoform X1
translation: MAAIGVHLGCTSACVAVYKDGRADVVANDAGDRVTPAVVAYSDREQVVGLAAKQSRIRHVSSTVVKVKQILGRSSADPQAQRYISESKCLVIEKNGKLRYEIDTGEETKLVTPEDVARLIFSKMKETAHSVLGSDANDVVVTVPFDFGEKQKSALGEAAGAAGFNVLRLIHEPSAALLAYGIGQDRPTGKSNVLVFKLGGTSLSLSVMEVNSGMYRVLSTNTNDNIGGAHFTDTLAQYLASEFQRLFKHDVRGNARAMMKLMNSAEVAKHSLSTLGSANCFVDSLYEGQDFDCNVSRARFELLCSPLFNKCTEAIRELLRQTGFTADDINKVVLCGGSSRIPRLQQLIKDLFPAVDLLNSIPPDEVIPIGAAIEAGILVGKESTSGDDSVMIECSAKDILVKGVDESGADRFTVLFPSGTPLPARRQHTLQAPGSASSVCLELYESEGKNSAKEEAKFAQVVLQDLDKRENGLRDILAVLTMKRDGSLHVTCTDQDTGRCEAITVEVAS
SIO_010081: Hspa14
subclass of: SO_0000673
so part of: Hspa14
location: complement(join(517173..517251,517895..517965,519227..519400,519782..519994,522609..522711,525175..525330,526226..526387,527332..527436,529386..529476,530724..530829,530965..531013,539135..539217,539301..539381,540730..540786))
location: region:517173-540786:-1
so has part: feature:540730-540786:-1:exon
so has part: feature:539301-539381:-1:exon
so has part: feature:539135-539217:-1:exon
so has part: feature:530965-531013:-1:exon
so has part: feature:530724-530829:-1:exon
so has part: feature:529386-529476:-1:exon
so has part: feature:527332-527436:-1:exon
so has part: feature:526226-526387:-1:exon
so has part: feature:525175-525330:-1:exon
so has part: feature:522609-522711:-1:exon
so has part: feature:519782-519994:-1:exon
so has part: feature:519227-519400:-1:exon
so has part: feature:517895-517965:-1:exon
so has part: feature:517173-517251:-1:exon

XP_021071157.1
type: Protein
SIO_000068: ncbiprotein

position:517173:-1
position: 517173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540786:-1
position: 540786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540730-540786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539301-539381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:539135-539217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530965-531013:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:530724-530829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529386-529476:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:527332-527436:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:526226-526387:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525175-525330:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:522609-522711:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519782-519994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519227-519400:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:517895-517965:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:517173-517251:-1:exon

Hspa14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Hspa14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 14 isoform X2
translation: MAGPMWSQMMRGIESHQLLLLTRTVNSSADPQAQRYISESKCLVIEKNGKLRYEIDTGEETKLVTPEDVARLIFSKMKETAHSVLGSDANDVVVTVPFDFGEKQKSALGEAAGAAGFNVLRLIHEPSAALLAYGIGQDRPTGKSNVLVFKLGGTSLSLSVMEVNSGMYRVLSTNTNDNIGGAHFTDTLAQYLASEFQRLFKHDVRGNARAMMKLMNSAEVAKHSLSTLGSANCFVDSLYEGQDFDCNVSRARFELLCSPLFNKCTEAIRELLRQTGFTADDINKVVLCGGSSRIPRLQQLIKDLFPAVDLLNSIPPDEVIPIGAAIEAGILVGKESTSGDDSVMIECSAKDILVKGVDESGADRFTVLFPSGTPLPARRQHTLQAPGSASSVCLELYESEGKNSAKEEAKFAQVVLQDLDKRENGLRDILAVLTMKRDGSLHVTCTDQDTGRCEAITVEVAS
SIO_010081: Hspa14
subclass of: SO_0000673
so part of: Hspa14
location: complement(join(517173..517251,517895..517965,519227..519400,519782..519994,522609..522711,525175..525330,526226..526387,527332..527436,529386..529476,530724..530829,530965..531013,539301..539380))
location: region:517173-539380:-1
so has part: feature:539301-539380:-1:exon
so has part: feature:530965-531013:-1:exon
so has part: feature:530724-530829:-1:exon
so has part: feature:529386-529476:-1:exon
so has part: feature:527332-527436:-1:exon
so has part: feature:526226-526387:-1:exon
so has part: feature:525175-525330:-1:exon
so has part: feature:522609-522711:-1:exon
so has part: feature:519782-519994:-1:exon
so has part: feature:519227-519400:-1:exon
so has part: feature:517895-517965:-1:exon
so has part: feature:517173-517251:-1:exon

XP_029403415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539301-539380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:530965-531013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:530724-530829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529386-529476:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527332-527436:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:526226-526387:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:525175-525330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522609-522711:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:519782-519994:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:519227-519400:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:517895-517965:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:517173-517251:-1:exon

Hspa14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Hspa14
product: heat shock protein family A (Hsp70) member 14, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021215499.2
SIO_010081: Hspa14
subclass of: SO_0000673
so part of: Hspa14
location: complement(join(535749..536036,539135..539217,539301..539381,540730..540978))
location: region:535749-540978:-1
so has part: feature:540730-540978:-1:exon
so has part: feature:539301-539381:-1:exon
so has part: feature:539135-539217:-1:exon
so has part: feature:535749-536036:-1:exon

position:535749:-1
position: 535749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540730-540978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539301-539381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:539135-539217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:535749-536036:-1:exon

position:536036:-1
position: 536036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hspa14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Hspa14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 14 isoform X3
translation: MAAIGVHLGCTSACVAVYKDGRADVVANDAGDRVTPAVVAYSDREQVVGLAAKQSRIRHVSSTVVKVKQILGRRVLSRDPQLQQLPPPFQRCSCSLSEQPHDQTGCVEGVKSLHQHQPKPSRGSLHTTASRLLLKSCFSLWWG
SIO_010081: Hspa14
subclass of: SO_0000673
so part of: Hspa14
location: complement(join(535826..536036,539135..539217,539301..539381,540730..540786))
location: region:535826-540786:-1
so has part: feature:540730-540786:-1:exon
so has part: feature:539301-539381:-1:exon
so has part: feature:539135-539217:-1:exon
so has part: feature:535826-536036:-1:exon

XP_021071158.1
type: Protein
SIO_000068: ncbiprotein

position:535826:-1
position: 535826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540730-540786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539301-539381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:539135-539217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:535826-536036:-1:exon

Cdnf
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Cdnf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 541165..552890
location: region:541165-552890:1
so has part: feature:541165-552890:1:exon
subclass of: SO_0000010

110334208
type: Gene
SIO_000068: ncbigene

position:541165:1
position: 541165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552890:1
position: 552890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541165-552890:1:exon

Cdnf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Cdnf
product: cerebral dopamine neurotrophic factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021216078.2
SIO_010081: Cdnf
subclass of: SO_0000673
so part of: Cdnf
location: join(541165..541336,547547..547674,549280..549421,552112..552890)
location: region:541165-552890:1
so has part: feature:541165-541336:1:exon
so has part: feature:547547-547674:1:exon
so has part: feature:549280-549421:1:exon
so has part: feature:552112-552890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:541165-541336:1:exon

position:541336:1
position: 541336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:547547-547674:1:exon

position:547547:1
position: 547547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547674:1
position: 547674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:549280-549421:1:exon

position:549280:1
position: 549280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549421:1
position: 549421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552112-552890:1:exon

position:552112:1
position: 552112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cdnf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Cdnf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebral dopamine neurotrophic factor
translation: MRSTSPAALVTFCAGLWISNHVLAQGLEAGVRPRADCEVCKEFLDRFYNSLLSRGVDFSAETIEKELLSFCSDAKGKENRLCYYLGATTDAATKILGEVTRPMSVHIPTVKICEKLKKMDSQICELKYEKKLDLASVDLWKMRVGELKQILQSWGEECRACAEKSDYVNLIKELAPKYVEIHPQTEL
SIO_010081: Cdnf
subclass of: SO_0000673
so part of: Cdnf
location: join(541222..541336,547547..547674,549280..549421,552112..552290)
location: region:541222-552290:1
so has part: feature:541222-541336:1:exon
so has part: feature:547547-547674:1:exon
so has part: feature:549280-549421:1:exon
so has part: feature:552112-552290:1:exon

XP_021071737.1
type: Protein
SIO_000068: ncbiprotein

position:541222:1
position: 541222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552290:1
position: 552290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541222-541336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547547-547674:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:549280-549421:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552112-552290:1:exon

Fam107b
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Fam107b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 583670..806138
location: region:583670-806138:1
so has part: feature:583670-806138:1:exon
subclass of: SO_0000010

110333794
type: Gene
SIO_000068: ncbigene

position:583670:1
position: 583670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806138:1
position: 806138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583670-806138:1:exon

Fam107b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Fam107b
product: family with sequence similarity 107 member B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021215512.2
SIO_010081: Fam107b
subclass of: SO_0000673
so part of: Fam107b
location: join(583670..584083,664939..664996,796918..797101,801602..801752,803493..806138)
location: region:583670-806138:1
so has part: feature:583670-584083:1:exon
so has part: feature:664939-664996:1:exon
so has part: feature:796918-797101:1:exon
so has part: feature:801602-801752:1:exon
so has part: feature:803493-806138:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:583670-584083:1:exon

position:584083:1
position: 584083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:664939-664996:1:exon

position:664939:1
position: 664939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664996:1
position: 664996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:796918-797101:1:exon

position:796918:1
position: 796918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797101:1
position: 797101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:801602-801752:1:exon

position:801602:1
position: 801602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801752:1
position: 801752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:803493-806138:1:exon

position:803493:1
position: 803493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fam107b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Fam107b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM107B isoform X1
translation: MSTWKSRLTRSLKLPSRRMHSFPCSALLACFGTTRENATFDQSSSTDTHSAIYVQPMAKAGRHPSHPKVEERAAEKRRDSGIHSEQNGTANGNNSQHTAVQPAETPEDFARSLNDGADCEAVTFQTSIPRPSIIDMPKEEEPHQEPQCPELEQKMLSDSPLENIDPKDSCLIPRNIMAEPDYIEDDNPELIRPQKLINPVKTSRNHQDLHRELLMNQKRGLAPQNKPELQKVMEKRRRDQVIKQKEEEAQKKKSDLEIELLKRQQKLEQLELEKQKLQEEQENAPEFVKVKGNLRRTGQEAAQAQES
SIO_010081: Fam107b
subclass of: SO_0000673
so part of: Fam107b
location: join(583670..584083,664939..664996,796918..797101,801602..801752,803493..803609)
location: region:583670-803609:1
so has part: feature:583670-584083:1:exon
so has part: feature:664939-664996:1:exon
so has part: feature:796918-797101:1:exon
so has part: feature:801602-801752:1:exon
so has part: feature:803493-803609:1:exon

XP_021071171.1
type: Protein
SIO_000068: ncbiprotein

position:803609:1
position: 803609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583670-584083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664939-664996:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:796918-797101:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:801602-801752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803493-803609:1:exon

Fam107b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Fam107b
product: family with sequence similarity 107 member B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021215513.1
SIO_010081: Fam107b
subclass of: SO_0000673
so part of: Fam107b
location: join(738453..738627,796918..797101,801602..801752,803493..806138)
location: region:738453-806138:1
so has part: feature:738453-738627:1:exon
so has part: feature:796918-797101:1:exon
so has part: feature:801602-801752:1:exon
so has part: feature:803493-806138:1:exon

position:738453:1
position: 738453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738453-738627:1:exon

position:738627:1
position: 738627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:796918-797101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:801602-801752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:803493-806138:1:exon

Fam107b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Fam107b
product: family with sequence similarity 107 member B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029547598.1
SIO_010081: Fam107b
subclass of: SO_0000673
so part of: Fam107b
location: join(739011..739261,796918..797101,801602..801752,803493..806138)
location: region:739011-806138:1
so has part: feature:739011-739261:1:exon
so has part: feature:796918-797101:1:exon
so has part: feature:801602-801752:1:exon
so has part: feature:803493-806138:1:exon

position:739011:1
position: 739011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:739011-739261:1:exon

position:739261:1
position: 739261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:796918-797101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:801602-801752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:803493-806138:1:exon

Fam107b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Fam107b
product: family with sequence similarity 107 member B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029547596.1
SIO_010081: Fam107b
subclass of: SO_0000673
so part of: Fam107b
location: join(774158..774229,796918..797101,801602..801752,803493..806138)
location: region:774158-806138:1
so has part: feature:774158-774229:1:exon
so has part: feature:796918-797101:1:exon
so has part: feature:801602-801752:1:exon
so has part: feature:803493-806138:1:exon

position:774158:1
position: 774158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774158-774229:1:exon

position:774229:1
position: 774229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:796918-797101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:801602-801752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:803493-806138:1:exon

Fam107b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Fam107b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM107B isoform X2
translation: MAVRATRLRGDDSPLENIDPKDSCLIPRNIMAEPDYIEDDNPELIRPQKLINPVKTSRNHQDLHRELLMNQKRGLAPQNKPELQKVMEKRRRDQVIKQKEEEAQKKKSDLEIELLKRQQKLEQLELEKQKLQEEQENAPEFVKVKGNLRRTGQEAAQAQES
SIO_010081: Fam107b
subclass of: SO_0000673
so part of: Fam107b
location: join(774196..774229,796918..797101,801602..801752,803493..803609)
location: region:774196-803609:1
so has part: feature:774196-774229:1:exon
so has part: feature:796918-797101:1:exon
so has part: feature:801602-801752:1:exon
so has part: feature:803493-803609:1:exon

XP_029403456.1
type: Protein
SIO_000068: ncbiprotein

position:774196:1
position: 774196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774196-774229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:796918-797101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:801602-801752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:803493-803609:1:exon

Fam107b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Fam107b
product: family with sequence similarity 107 member B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029547597.1
SIO_010081: Fam107b
subclass of: SO_0000673
so part of: Fam107b
location: join(794768..794861,796918..797101,801602..801752,803493..806138)
location: region:794768-806138:1
so has part: feature:794768-794861:1:exon
so has part: feature:796918-797101:1:exon
so has part: feature:801602-801752:1:exon
so has part: feature:803493-806138:1:exon

position:794768:1
position: 794768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794768-794861:1:exon

position:794861:1
position: 794861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:796918-797101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:801602-801752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:803493-806138:1:exon

Fam107b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Fam107b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM107B isoform X3
translation: MGSLTRYVQDSPLENIDPKDSCLIPRNIMAEPDYIEDDNPELIRPQKLINPVKTSRNHQDLHRELLMNQKRGLAPQNKPELQKVMEKRRRDQVIKQKEEEAQKKKSDLEIELLKRQQKLEQLELEKQKLQEEQENAPEFVKVKGNLRRTGQEAAQAQES
SIO_010081: Fam107b
subclass of: SO_0000673
so part of: Fam107b
location: join(794834..794861,796918..797101,801602..801752,803493..803609)
location: region:794834-803609:1
so has part: feature:794834-794861:1:exon
so has part: feature:796918-797101:1:exon
so has part: feature:801602-801752:1:exon
so has part: feature:803493-803609:1:exon

XP_029403457.1
type: Protein
SIO_000068: ncbiprotein

position:794834:1
position: 794834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794834-794861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:796918-797101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:801602-801752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:803493-803609:1:exon

Fam107b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Fam107b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM107B isoform X4
translation: MAEPDYIEDDNPELIRPQKLINPVKTSRNHQDLHRELLMNQKRGLAPQNKPELQKVMEKRRRDQVIKQKEEEAQKKKSDLEIELLKRQQKLEQLELEKQKLQEEQENAPEFVKVKGNLRRTGQEAAQAQES
SIO_010081: Fam107b
subclass of: SO_0000673
so part of: Fam107b
location: join(796974..797101,801602..801752,803493..803609)
location: region:796974-803609:1
so has part: feature:796974-797101:1:exon
so has part: feature:801602-801752:1:exon
so has part: feature:803493-803609:1:exon

XP_021071172.1
type: Protein
SIO_000068: ncbiprotein

position:796974:1
position: 796974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:796974-797101:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:801602-801752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:803493-803609:1:exon

Fam107b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Fam107b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM107B isoform X4
translation: MAEPDYIEDDNPELIRPQKLINPVKTSRNHQDLHRELLMNQKRGLAPQNKPELQKVMEKRRRDQVIKQKEEEAQKKKSDLEIELLKRQQKLEQLELEKQKLQEEQENAPEFVKVKGNLRRTGQEAAQAQES
SIO_010081: Fam107b
subclass of: SO_0000673
so part of: Fam107b
location: join(796974..797101,801602..801752,803493..803609)
location: region:796974-803609:1
so has part: feature:796974-797101:1:exon
so has part: feature:801602-801752:1:exon
so has part: feature:803493-803609:1:exon

XP_029403458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:796974-797101:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:801602-801752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:803493-803609:1:exon

LOC115065681
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115065681
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(876904..877048)
location: region:876904-877048:-1
so has part: feature:876904-877048:-1:exon
subclass of: SO_0000578

115065681
type: Gene
SIO_000068: ncbigene

position:876904:-1
position: 876904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877048:-1
position: 877048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:876904-877048:-1:exon

LOC115065681
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snoRNA
gene: LOC115065681
product: small nucleolar RNA SNORA48
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00554
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003845448.1
SIO_010081: LOC115065681
subclass of: SO_0000673
so part of: LOC115065681
location: complement(876904..877048)
location: region:876904-877048:-1
so has part: feature:876904-877048:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:876904-877048:-1:exon

LOC110334232
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110334232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1028183..1029069)
location: region:1028183-1029069:-1
so has part: feature:1028183-1029069:-1:exon

110334232
type: Gene
SIO_000068: ncbigene

position:1028183:-1
position: 1028183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029069:-1
position: 1029069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028183-1029069:-1:exon

LOC110334232
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110334232
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC110334232
subclass of: SO_0000673
so part of: LOC110334232
location: complement(1028183..1029069)
location: region:1028183-1029069:-1
so has part: feature:1028183-1029069:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1028183-1029069:-1:exon

LOC115065647
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115065647
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1104970..1105076)
location: region:1104970-1105076:-1
so has part: feature:1104970-1105076:-1:exon
subclass of: SO_0000623

115065647
type: Gene
SIO_000068: ncbigene

position:1104970:-1
position: 1104970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105076:-1
position: 1105076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104970-1105076:-1:exon

LOC115065647
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snRNA
gene: LOC115065647
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003845416.1
SIO_010081: LOC115065647
subclass of: SO_0000673
so part of: LOC115065647
location: complement(1104970..1105076)
location: region:1104970-1105076:-1
so has part: feature:1104970-1105076:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1104970-1105076:-1:exon

LOC110333587
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110333587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1108125..1121075)
location: region:1108125-1121075:-1
so has part: feature:1108125-1121075:-1:exon
subclass of: SO_0000011

110333587
type: Gene
SIO_000068: ncbigene

position:1108125:-1
position: 1108125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1121075:-1
position: 1121075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1108125-1121075:-1:exon

LOC110333587
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: lncRNA
gene: LOC110333587
product: uncharacterized LOC110333587
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs
transcript id: XR_002381088.1
SIO_010081: LOC110333587
subclass of: SO_0000673
so part of: LOC110333587
location: complement(join(1108125..1108269,1114708..1114787,1120864..1121075))
location: region:1108125-1121075:-1
so has part: feature:1120864-1121075:-1:exon
so has part: feature:1114708-1114787:-1:exon
so has part: feature:1108125-1108269:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1120864-1121075:-1:exon

position:1120864:-1
position: 1120864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1114708-1114787:-1:exon

position:1114708:-1
position: 1114708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114787:-1
position: 1114787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1108125-1108269:-1:exon

position:1108269:-1
position: 1108269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110334233
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110334233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1150421..1159933)
location: region:1150421-1159933:-1
so has part: feature:1150421-1159933:-1:exon

110334233
type: Gene
SIO_000068: ncbigene

position:1150421:-1
position: 1150421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159933:-1
position: 1159933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150421-1159933:-1:exon

LOC110334233
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110334233
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC110334233
subclass of: SO_0000673
so part of: LOC110334233
location: complement(1150421..1150975)
location: region:1150421-1150975:-1
so has part: feature:1150421-1150975:-1:exon

position:1150975:-1
position: 1150975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150421-1150975:-1:exon

LOC110334233
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110334233
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC110334233
subclass of: SO_0000673
so part of: LOC110334233
location: complement(1158026..1158086)
location: region:1158026-1158086:-1
so has part: feature:1158026-1158086:-1:exon

position:1158026:-1
position: 1158026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158086:-1
position: 1158086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1158026-1158086:-1:exon

LOC110334233
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110334233
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC110334233
subclass of: SO_0000673
so part of: LOC110334233
location: complement(1159927..1159933)
location: region:1159927-1159933:-1
so has part: feature:1159927-1159933:-1:exon

position:1159927:-1
position: 1159927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159927-1159933:-1:exon

LOC110333656
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110333656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1261039..1269848)
location: region:1261039-1269848:-1
so has part: feature:1261039-1269848:-1:exon
subclass of: SO_0000011

110333656
type: Gene
SIO_000068: ncbigene

position:1261039:-1
position: 1261039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1269848:-1
position: 1269848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1261039-1269848:-1:exon

LOC110333656
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: lncRNA
gene: LOC110333656
product: uncharacterized LOC110333656
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_002381099.1
SIO_010081: LOC110333656
subclass of: SO_0000673
so part of: LOC110333656
location: complement(join(1261039..1261683,1262079..1262253,1266559..1266732,1269220..1269349,1269717..1269848))
location: region:1261039-1269848:-1
so has part: feature:1269717-1269848:-1:exon
so has part: feature:1269220-1269349:-1:exon
so has part: feature:1266559-1266732:-1:exon
so has part: feature:1262079-1262253:-1:exon
so has part: feature:1261039-1261683:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1269717-1269848:-1:exon

position:1269717:-1
position: 1269717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1269220-1269349:-1:exon

position:1269220:-1
position: 1269220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1269349:-1
position: 1269349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1266559-1266732:-1:exon

position:1266559:-1
position: 1266559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1266732:-1
position: 1266732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1262079-1262253:-1:exon

position:1262079:-1
position: 1262079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262253:-1
position: 1262253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1261039-1261683:-1:exon

position:1261683:-1
position: 1261683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Frmd4a
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Frmd4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1269400..1577338
location: region:1269400-1577338:1
so has part: feature:1269400-1577338:1:exon
subclass of: SO_0000010

110333655
type: Gene
SIO_000068: ncbigene

position:1269400:1
position: 1269400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1577338:1
position: 1577338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1269400-1577338:1:exon

Frmd4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Frmd4a
product: FERM domain containing 4A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021215326.2
SIO_010081: Frmd4a
subclass of: SO_0000673
so part of: Frmd4a
location: join(1269400..1269751,1394425..1394490,1434956..1435050,1445574..1445666,1460986..1461070,1477264..1477320,1478473..1478495,1494311..1494394,1498852..1498917,1499516..1499573,1501306..1501392,1524043..1524119,1529699..1529837,1535954..1536095,1549972..1550105,1554327..1554449,1558271..1558499,1560847..1560903,1564543..1564783,1565538..1565702,1567441..1568315,1570069..1570165,1572113..1572184,1575167..1577338)
location: region:1269400-1577338:1
so has part: feature:1269400-1269751:1:exon
so has part: feature:1394425-1394490:1:exon
so has part: feature:1434956-1435050:1:exon
so has part: feature:1445574-1445666:1:exon
so has part: feature:1460986-1461070:1:exon
so has part: feature:1477264-1477320:1:exon
so has part: feature:1478473-1478495:1:exon
so has part: feature:1494311-1494394:1:exon
so has part: feature:1498852-1498917:1:exon
so has part: feature:1499516-1499573:1:exon
so has part: feature:1501306-1501392:1:exon
so has part: feature:1524043-1524119:1:exon
so has part: feature:1529699-1529837:1:exon
so has part: feature:1535954-1536095:1:exon
so has part: feature:1549972-1550105:1:exon
so has part: feature:1554327-1554449:1:exon
so has part: feature:1558271-1558499:1:exon
so has part: feature:1560847-1560903:1:exon
so has part: feature:1564543-1564783:1:exon
so has part: feature:1565538-1565702:1:exon
so has part: feature:1567441-1568315:1:exon
so has part: feature:1570069-1570165:1:exon
so has part: feature:1572113-1572184:1:exon
so has part: feature:1575167-1577338:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1269400-1269751:1:exon

position:1269751:1
position: 1269751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1394425-1394490:1:exon

position:1394425:1
position: 1394425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1394490:1
position: 1394490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1434956-1435050:1:exon

position:1434956:1
position: 1434956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1435050:1
position: 1435050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1445574-1445666:1:exon

position:1445574:1
position: 1445574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445666:1
position: 1445666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1460986-1461070:1:exon

position:1460986:1
position: 1460986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1461070:1
position: 1461070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1477264-1477320:1:exon

position:1477264:1
position: 1477264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1477320:1
position: 1477320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1478473-1478495:1:exon

position:1478473:1
position: 1478473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1478495:1
position: 1478495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1494311-1494394:1:exon

position:1494311:1
position: 1494311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1494394:1
position: 1494394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1498852-1498917:1:exon

position:1498852:1
position: 1498852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498917:1
position: 1498917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1499516-1499573:1:exon

position:1499516:1
position: 1499516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1499573:1
position: 1499573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1501306-1501392:1:exon

position:1501306:1
position: 1501306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1501392:1
position: 1501392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1524043-1524119:1:exon

position:1524043:1
position: 1524043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1524119:1
position: 1524119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1529699-1529837:1:exon

position:1529699:1
position: 1529699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529837:1
position: 1529837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1535954-1536095:1:exon

position:1535954:1
position: 1535954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1536095:1
position: 1536095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1549972-1550105:1:exon

position:1549972:1
position: 1549972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1550105:1
position: 1550105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1554327-1554449:1:exon

position:1554327:1
position: 1554327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1554449:1
position: 1554449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1558271-1558499:1:exon

position:1558271:1
position: 1558271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1558499:1
position: 1558499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1560847-1560903:1:exon

position:1560847:1
position: 1560847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1560903:1
position: 1560903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1564543-1564783:1:exon

position:1564543:1
position: 1564543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1564783:1
position: 1564783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1565538-1565702:1:exon

position:1565538:1
position: 1565538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1565702:1
position: 1565702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1567441-1568315:1:exon

position:1567441:1
position: 1567441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1568315:1
position: 1568315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1570069-1570165:1:exon

position:1570069:1
position: 1570069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1570165:1
position: 1570165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1572113-1572184:1:exon

position:1572113:1
position: 1572113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1572184:1
position: 1572184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1575167-1577338:1:exon

position:1575167:1
position: 1575167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Frmd4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Frmd4a
product: FERM domain containing 4A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029547334.1
SIO_010081: Frmd4a
subclass of: SO_0000673
so part of: Frmd4a
location: join(1269551..1269751,1394425..1394490,1434956..1435050,1445574..1445666,1460986..1461070,1477264..1477320,1478473..1478495,1494311..1494394,1498852..1498917,1499516..1499573,1501306..1501392,1524043..1524119,1529699..1529837,1535954..1536095,1549972..1550105,1554327..1554449,1558271..1558499,1560847..1560903,1564543..1564783,1565538..1565702,1567441..1568315,1570069..1570165,1575167..1577338)
location: region:1269551-1577338:1
so has part: feature:1269551-1269751:1:exon
so has part: feature:1394425-1394490:1:exon
so has part: feature:1434956-1435050:1:exon
so has part: feature:1445574-1445666:1:exon
so has part: feature:1460986-1461070:1:exon
so has part: feature:1477264-1477320:1:exon
so has part: feature:1478473-1478495:1:exon
so has part: feature:1494311-1494394:1:exon
so has part: feature:1498852-1498917:1:exon
so has part: feature:1499516-1499573:1:exon
so has part: feature:1501306-1501392:1:exon
so has part: feature:1524043-1524119:1:exon
so has part: feature:1529699-1529837:1:exon
so has part: feature:1535954-1536095:1:exon
so has part: feature:1549972-1550105:1:exon
so has part: feature:1554327-1554449:1:exon
so has part: feature:1558271-1558499:1:exon
so has part: feature:1560847-1560903:1:exon
so has part: feature:1564543-1564783:1:exon
so has part: feature:1565538-1565702:1:exon
so has part: feature:1567441-1568315:1:exon
so has part: feature:1570069-1570165:1:exon
so has part: feature:1575167-1577338:1:exon

position:1269551:1
position: 1269551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1269551-1269751:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1394425-1394490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1434956-1435050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1445574-1445666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1460986-1461070:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1477264-1477320:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1478473-1478495:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1494311-1494394:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1498852-1498917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1499516-1499573:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1501306-1501392:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1524043-1524119:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1529699-1529837:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1535954-1536095:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1549972-1550105:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1554327-1554449:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1558271-1558499:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1560847-1560903:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1564543-1564783:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1565538-1565702:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1567441-1568315:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1570069-1570165:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1575167-1577338:1:exon

Frmd4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Frmd4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 4A isoform X1
translation: MVVQTAVTPNRPQRLLKIPYGSLRRRSVERMTEGRRCQVHLLDDRKLELLVQPKLLAKELLDLVASHFNLKEKEYFGIAFTDETGHLNWLQLDRRVLEHDFPKKSGPVALYFCVRFYIESISYLKDNATIELFFLNAKSCIYKELIDVDSEVVFELASYILQEAKGDFSSNEVVRSDLKKLPALPTQALKEHPSLAYCEDRVIEYYKKLNGQTRGQAIVNYMSIVESLPTYGVHYYAVKDKQGIPWWLGLSYKGIFQYDYHDKVKPRKIFQWRQLENLYFREKKFSVEVHDPRRASVTRRTFGHSGIAVHTWYACPALIKSIWAMAISQHQFYLDRKQSKSKIHAARSLSEIAIDLTETGTLKTSKLANMGSKGKIISGSSGSLLSSGSQESDSSQSAKKDMLAALKSRQEALEETLRQRLEELKRLCLREAELTGKLPVEYPLDPGEEPPIVRRRIGTAFKLDEQKILPKGEEAELERLEREFAIQSQITEAARRLASDPNVSKKLKKQRKTSYLNALKKLQEIENAINENRIKSGKKPTQRASLVIDDGNIASEDSSLSDALVLEDEDSQVTSTISPLQSPHKGLPPRPPSSHNRPPPPQSLEGLRQMHYHRSDYDKSPLKPKMWSESSLDEPYEKVKKRSSHGHSSSHKRFPSTGSCTEAGVSSSLQNSPIRSLPHWNSQSSMPSTPDLRIRSPHYVHSTRSVDISPTRLHSLALHFRHRSSSLESQGKLLGSENDTGSPDFYTPRTRSSNGSDPMDDCSSCTSHSSSEHYYPAQMNANYSTLAEDSPSKARQRQRQRQRAAGALGSASSGSMPNLAARSGAASTGGGVYLHSQSQPSSQYRIKEYPLYIEGSATPVVVRSLESDQEGHYSVKAQFKTSNSYTAGGLFKESWRGGGDEGDAGRLTPSRSQILRTPSLGRDGAHDKGSGRAAVSDELRQWYQRSTASHKEHSRLSHTSSTSSDSGSQYSTSSQSTFVAHSRVTRMPQMCKATSAALPQSQRSSTPSSEIGATPPSSPHHILTWQTGSYSDSCFLDSSLYPELADVQWYGQEKAKPGTLV
SIO_010081: Frmd4a
subclass of: SO_0000673
so part of: Frmd4a
location: join(1269662..1269751,1394425..1394490,1434956..1435050,1445574..1445666,1460986..1461070,1477264..1477320,1478473..1478495,1494311..1494394,1498852..1498917,1499516..1499573,1501306..1501392,1524043..1524119,1529699..1529837,1535954..1536095,1549972..1550105,1554327..1554449,1558271..1558499,1560847..1560903,1564543..1564783,1565538..1565702,1567441..1568315,1570069..1570165,1575167..1575269)
location: region:1269662-1575269:1
so has part: feature:1269662-1269751:1:exon
so has part: feature:1394425-1394490:1:exon
so has part: feature:1434956-1435050:1:exon
so has part: feature:1445574-1445666:1:exon
so has part: feature:1460986-1461070:1:exon
so has part: feature:1477264-1477320:1:exon
so has part: feature:1478473-1478495:1:exon
so has part: feature:1494311-1494394:1:exon
so has part: feature:1498852-1498917:1:exon
so has part: feature:1499516-1499573:1:exon
so has part: feature:1501306-1501392:1:exon
so has part: feature:1524043-1524119:1:exon
so has part: feature:1529699-1529837:1:exon
so has part: feature:1535954-1536095:1:exon
so has part: feature:1549972-1550105:1:exon
so has part: feature:1554327-1554449:1:exon
so has part: feature:1558271-1558499:1:exon
so has part: feature:1560847-1560903:1:exon
so has part: feature:1564543-1564783:1:exon
so has part: feature:1565538-1565702:1:exon
so has part: feature:1567441-1568315:1:exon
so has part: feature:1570069-1570165:1:exon
so has part: feature:1575167-1575269:1:exon

XP_029403194.1
type: Protein
SIO_000068: ncbiprotein

position:1269662:1
position: 1269662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1575269:1
position: 1575269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1269662-1269751:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1394425-1394490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1434956-1435050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1445574-1445666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1460986-1461070:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1477264-1477320:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1478473-1478495:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1494311-1494394:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1498852-1498917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1499516-1499573:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1501306-1501392:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1524043-1524119:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1529699-1529837:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1535954-1536095:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1549972-1550105:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1554327-1554449:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1558271-1558499:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1560847-1560903:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1564543-1564783:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1565538-1565702:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1567441-1568315:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1570069-1570165:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1575167-1575269:1:exon

Frmd4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Frmd4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 4A isoform X2
translation: MVVQTAVTPNRPQRLLKIPYGSLRRRSVERMTEGRRCQVHLLDDRKLELLVQPKLLAKELLDLVASHFNLKEKEYFGIAFTDETGHLNWLQLDRRVLEHDFPKKSGPVALYFCVRFYIESISYLKDNATIELFFLNAKSCIYKELIDVDSEVVFELASYILQEAKGDFSSNEVVRSDLKKLPALPTQALKEHPSLAYCEDRVIEYYKKLNGQTRGQAIVNYMSIVESLPTYGVHYYAVKDKQGIPWWLGLSYKGIFQYDYHDKVKPRKIFQWRQLENLYFREKKFSVEVHDPRRASVTRRTFGHSGIAVHTWYACPALIKSIWAMAISQHQFYLDRKQSKSKIHAARSLSEIAIDLTETGTLKTSKLANMGSKGKIISGSSGSLLSSGSQESDSSQSAKKDMLAALKSRQEALEETLRQRLEELKRLCLREAELTGKLPVEYPLDPGEEPPIVRRRIGTAFKLDEQKILPKGEEAELERLEREFAIQSQITEAARRLASDPNVSKKLKKQRKTSYLNALKKLQEIENAINENRIKSGKKPTQRASLVIDDGNIASEDSSLSDALVLEDEDSQVTSTISPLQSPHKGLPPRPPSSHNRPPPPQSLEGLRQMHYHRSDYDKSPLKPKMWSESSLDEPYEKVKKRSSHGHSSSHKRFPSTGSCTEAGVSSSLQNSPIRSLPHWNSQSSMPSTPDLRIRSPHYVHSTRSVDISPTRLHSLALHFRHRSSSLESQGKLLGSENDTGSPDFYTPRTRSSNGSDPMDDCSSCTSHSSSEHYYPAQMNANYSTLAEDSPSKARQRQRQRQRAAGALGSASSGSMPNLAARSGAASTGGGVYLHSQSQPSSQYRIKEYPLYIEGSATPVVVRSLESDQEGHYSVKAQFKTSNSYTAGGLFKESWRGGGDEGDAGRLTPSRSQILRTPSLGRDGAHDKGSGRAAVSDELRQWYQRSTASHKEHSRLSHTSSTSSDSGSQYSTSSQSTFVAHSRVTRMPQMCKATSAALPQSQRSSTPSSEIGATPPSSPHHILTWQTGEATENSPIMDGSESPTHQSTDE
SIO_010081: Frmd4a
subclass of: SO_0000673
so part of: Frmd4a
location: join(1269662..1269751,1394425..1394490,1434956..1435050,1445574..1445666,1460986..1461070,1477264..1477320,1478473..1478495,1494311..1494394,1498852..1498917,1499516..1499573,1501306..1501392,1524043..1524119,1529699..1529837,1535954..1536095,1549972..1550105,1554327..1554449,1558271..1558499,1560847..1560903,1564543..1564783,1565538..1565702,1567441..1568315,1570069..1570165,1572113..1572182)
location: region:1269662-1572182:1
so has part: feature:1269662-1269751:1:exon
so has part: feature:1394425-1394490:1:exon
so has part: feature:1434956-1435050:1:exon
so has part: feature:1445574-1445666:1:exon
so has part: feature:1460986-1461070:1:exon
so has part: feature:1477264-1477320:1:exon
so has part: feature:1478473-1478495:1:exon
so has part: feature:1494311-1494394:1:exon
so has part: feature:1498852-1498917:1:exon
so has part: feature:1499516-1499573:1:exon
so has part: feature:1501306-1501392:1:exon
so has part: feature:1524043-1524119:1:exon
so has part: feature:1529699-1529837:1:exon
so has part: feature:1535954-1536095:1:exon
so has part: feature:1549972-1550105:1:exon
so has part: feature:1554327-1554449:1:exon
so has part: feature:1558271-1558499:1:exon
so has part: feature:1560847-1560903:1:exon
so has part: feature:1564543-1564783:1:exon
so has part: feature:1565538-1565702:1:exon
so has part: feature:1567441-1568315:1:exon
so has part: feature:1570069-1570165:1:exon
so has part: feature:1572113-1572182:1:exon

XP_021070985.1
type: Protein
SIO_000068: ncbiprotein

position:1572182:1
position: 1572182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1269662-1269751:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1394425-1394490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1434956-1435050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1445574-1445666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1460986-1461070:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1477264-1477320:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1478473-1478495:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1494311-1494394:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1498852-1498917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1499516-1499573:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1501306-1501392:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1524043-1524119:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1529699-1529837:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1535954-1536095:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1549972-1550105:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1554327-1554449:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1558271-1558499:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1560847-1560903:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1564543-1564783:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1565538-1565702:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1567441-1568315:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1570069-1570165:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1572113-1572182:1:exon

LOC115065649
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115065649
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1344587..1344693)
location: region:1344587-1344693:-1
so has part: feature:1344587-1344693:-1:exon
subclass of: SO_0000623

115065649
type: Gene
SIO_000068: ncbigene

position:1344587:-1
position: 1344587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344693:-1
position: 1344693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344587-1344693:-1:exon

LOC115065649
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snRNA
gene: LOC115065649
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003845418.1
SIO_010081: LOC115065649
subclass of: SO_0000673
so part of: LOC115065649
location: complement(1344587..1344693)
location: region:1344587-1344693:-1
so has part: feature:1344587-1344693:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1344587-1344693:-1:exon

Frmd4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Frmd4a
product: FERM domain containing 4A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021215327.2
SIO_010081: Frmd4a
subclass of: SO_0000673
so part of: Frmd4a
location: join(1366589..1366780,1394425..1394490,1434956..1435050,1445574..1445666,1460986..1461070,1477264..1477320,1478473..1478495,1494311..1494394,1498852..1498917,1499516..1499573,1501306..1501392,1524043..1524119,1529699..1529837,1535954..1536095,1549972..1550105,1554327..1554449,1558271..1558499,1560847..1560903,1564543..1564783,1565538..1565702,1567441..1568315,1570069..1570165,1572113..1572184,1575167..1577338)
location: region:1366589-1577338:1
so has part: feature:1366589-1366780:1:exon
so has part: feature:1394425-1394490:1:exon
so has part: feature:1434956-1435050:1:exon
so has part: feature:1445574-1445666:1:exon
so has part: feature:1460986-1461070:1:exon
so has part: feature:1477264-1477320:1:exon
so has part: feature:1478473-1478495:1:exon
so has part: feature:1494311-1494394:1:exon
so has part: feature:1498852-1498917:1:exon
so has part: feature:1499516-1499573:1:exon
so has part: feature:1501306-1501392:1:exon
so has part: feature:1524043-1524119:1:exon
so has part: feature:1529699-1529837:1:exon
so has part: feature:1535954-1536095:1:exon
so has part: feature:1549972-1550105:1:exon
so has part: feature:1554327-1554449:1:exon
so has part: feature:1558271-1558499:1:exon
so has part: feature:1560847-1560903:1:exon
so has part: feature:1564543-1564783:1:exon
so has part: feature:1565538-1565702:1:exon
so has part: feature:1567441-1568315:1:exon
so has part: feature:1570069-1570165:1:exon
so has part: feature:1572113-1572184:1:exon
so has part: feature:1575167-1577338:1:exon

position:1366589:1
position: 1366589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1366589-1366780:1:exon

position:1366780:1
position: 1366780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1394425-1394490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1434956-1435050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1445574-1445666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1460986-1461070:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1477264-1477320:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1478473-1478495:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1494311-1494394:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1498852-1498917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1499516-1499573:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1501306-1501392:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1524043-1524119:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1529699-1529837:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1535954-1536095:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1549972-1550105:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1554327-1554449:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1558271-1558499:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1560847-1560903:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1564543-1564783:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1565538-1565702:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1567441-1568315:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1570069-1570165:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1572113-1572184:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1575167-1577338:1:exon

Frmd4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Frmd4a
product: FERM domain containing 4A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029547335.1
SIO_010081: Frmd4a
subclass of: SO_0000673
so part of: Frmd4a
location: join(1366608..1366780,1394425..1394490,1434956..1435050,1445574..1445666,1460986..1461070,1477264..1477320,1478473..1478495,1494311..1494394,1498852..1498917,1499516..1499573,1501306..1501392,1524043..1524119,1529699..1529837,1535954..1536095,1549972..1550105,1554327..1554449,1558271..1558499,1560847..1560903,1564543..1564783,1565538..1565702,1567441..1568315,1570069..1570165,1575167..1577338)
location: region:1366608-1577338:1
so has part: feature:1366608-1366780:1:exon
so has part: feature:1394425-1394490:1:exon
so has part: feature:1434956-1435050:1:exon
so has part: feature:1445574-1445666:1:exon
so has part: feature:1460986-1461070:1:exon
so has part: feature:1477264-1477320:1:exon
so has part: feature:1478473-1478495:1:exon
so has part: feature:1494311-1494394:1:exon
so has part: feature:1498852-1498917:1:exon
so has part: feature:1499516-1499573:1:exon
so has part: feature:1501306-1501392:1:exon
so has part: feature:1524043-1524119:1:exon
so has part: feature:1529699-1529837:1:exon
so has part: feature:1535954-1536095:1:exon
so has part: feature:1549972-1550105:1:exon
so has part: feature:1554327-1554449:1:exon
so has part: feature:1558271-1558499:1:exon
so has part: feature:1560847-1560903:1:exon
so has part: feature:1564543-1564783:1:exon
so has part: feature:1565538-1565702:1:exon
so has part: feature:1567441-1568315:1:exon
so has part: feature:1570069-1570165:1:exon
so has part: feature:1575167-1577338:1:exon

position:1366608:1
position: 1366608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1366608-1366780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1394425-1394490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1434956-1435050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1445574-1445666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1460986-1461070:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1477264-1477320:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1478473-1478495:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1494311-1494394:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1498852-1498917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1499516-1499573:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1501306-1501392:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1524043-1524119:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1529699-1529837:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1535954-1536095:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1549972-1550105:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1554327-1554449:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1558271-1558499:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1560847-1560903:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1564543-1564783:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1565538-1565702:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1567441-1568315:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1570069-1570165:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1575167-1577338:1:exon

Frmd4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Frmd4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 4A isoform X3
translation: MTEGRRCQVHLLDDRKLELLVQPKLLAKELLDLVASHFNLKEKEYFGIAFTDETGHLNWLQLDRRVLEHDFPKKSGPVALYFCVRFYIESISYLKDNATIELFFLNAKSCIYKELIDVDSEVVFELASYILQEAKGDFSSNEVVRSDLKKLPALPTQALKEHPSLAYCEDRVIEYYKKLNGQTRGQAIVNYMSIVESLPTYGVHYYAVKDKQGIPWWLGLSYKGIFQYDYHDKVKPRKIFQWRQLENLYFREKKFSVEVHDPRRASVTRRTFGHSGIAVHTWYACPALIKSIWAMAISQHQFYLDRKQSKSKIHAARSLSEIAIDLTETGTLKTSKLANMGSKGKIISGSSGSLLSSGSQESDSSQSAKKDMLAALKSRQEALEETLRQRLEELKRLCLREAELTGKLPVEYPLDPGEEPPIVRRRIGTAFKLDEQKILPKGEEAELERLEREFAIQSQITEAARRLASDPNVSKKLKKQRKTSYLNALKKLQEIENAINENRIKSGKKPTQRASLVIDDGNIASEDSSLSDALVLEDEDSQVTSTISPLQSPHKGLPPRPPSSHNRPPPPQSLEGLRQMHYHRSDYDKSPLKPKMWSESSLDEPYEKVKKRSSHGHSSSHKRFPSTGSCTEAGVSSSLQNSPIRSLPHWNSQSSMPSTPDLRIRSPHYVHSTRSVDISPTRLHSLALHFRHRSSSLESQGKLLGSENDTGSPDFYTPRTRSSNGSDPMDDCSSCTSHSSSEHYYPAQMNANYSTLAEDSPSKARQRQRQRQRAAGALGSASSGSMPNLAARSGAASTGGGVYLHSQSQPSSQYRIKEYPLYIEGSATPVVVRSLESDQEGHYSVKAQFKTSNSYTAGGLFKESWRGGGDEGDAGRLTPSRSQILRTPSLGRDGAHDKGSGRAAVSDELRQWYQRSTASHKEHSRLSHTSSTSSDSGSQYSTSSQSTFVAHSRVTRMPQMCKATSAALPQSQRSSTPSSEIGATPPSSPHHILTWQTGSYSDSCFLDSSLYPELADVQWYGQEKAKPGTLV
SIO_010081: Frmd4a
subclass of: SO_0000673
so part of: Frmd4a
location: join(1394425..1394490,1434956..1435050,1445574..1445666,1460986..1461070,1477264..1477320,1478473..1478495,1494311..1494394,1498852..1498917,1499516..1499573,1501306..1501392,1524043..1524119,1529699..1529837,1535954..1536095,1549972..1550105,1554327..1554449,1558271..1558499,1560847..1560903,1564543..1564783,1565538..1565702,1567441..1568315,1570069..1570165,1575167..1575269)
location: region:1394425-1575269:1
so has part: feature:1394425-1394490:1:exon
so has part: feature:1434956-1435050:1:exon
so has part: feature:1445574-1445666:1:exon
so has part: feature:1460986-1461070:1:exon
so has part: feature:1477264-1477320:1:exon
so has part: feature:1478473-1478495:1:exon
so has part: feature:1494311-1494394:1:exon
so has part: feature:1498852-1498917:1:exon
so has part: feature:1499516-1499573:1:exon
so has part: feature:1501306-1501392:1:exon
so has part: feature:1524043-1524119:1:exon
so has part: feature:1529699-1529837:1:exon
so has part: feature:1535954-1536095:1:exon
so has part: feature:1549972-1550105:1:exon
so has part: feature:1554327-1554449:1:exon
so has part: feature:1558271-1558499:1:exon
so has part: feature:1560847-1560903:1:exon
so has part: feature:1564543-1564783:1:exon
so has part: feature:1565538-1565702:1:exon
so has part: feature:1567441-1568315:1:exon
so has part: feature:1570069-1570165:1:exon
so has part: feature:1575167-1575269:1:exon

XP_029403195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1394425-1394490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434956-1435050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1445574-1445666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1460986-1461070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1477264-1477320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1478473-1478495:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1494311-1494394:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1498852-1498917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1499516-1499573:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1501306-1501392:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1524043-1524119:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1529699-1529837:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1535954-1536095:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1549972-1550105:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1554327-1554449:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1558271-1558499:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1560847-1560903:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1564543-1564783:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1565538-1565702:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1567441-1568315:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1570069-1570165:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1575167-1575269:1:exon

Frmd4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Frmd4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 4A isoform X4
translation: MTEGRRCQVHLLDDRKLELLVQPKLLAKELLDLVASHFNLKEKEYFGIAFTDETGHLNWLQLDRRVLEHDFPKKSGPVALYFCVRFYIESISYLKDNATIELFFLNAKSCIYKELIDVDSEVVFELASYILQEAKGDFSSNEVVRSDLKKLPALPTQALKEHPSLAYCEDRVIEYYKKLNGQTRGQAIVNYMSIVESLPTYGVHYYAVKDKQGIPWWLGLSYKGIFQYDYHDKVKPRKIFQWRQLENLYFREKKFSVEVHDPRRASVTRRTFGHSGIAVHTWYACPALIKSIWAMAISQHQFYLDRKQSKSKIHAARSLSEIAIDLTETGTLKTSKLANMGSKGKIISGSSGSLLSSGSQESDSSQSAKKDMLAALKSRQEALEETLRQRLEELKRLCLREAELTGKLPVEYPLDPGEEPPIVRRRIGTAFKLDEQKILPKGEEAELERLEREFAIQSQITEAARRLASDPNVSKKLKKQRKTSYLNALKKLQEIENAINENRIKSGKKPTQRASLVIDDGNIASEDSSLSDALVLEDEDSQVTSTISPLQSPHKGLPPRPPSSHNRPPPPQSLEGLRQMHYHRSDYDKSPLKPKMWSESSLDEPYEKVKKRSSHGHSSSHKRFPSTGSCTEAGVSSSLQNSPIRSLPHWNSQSSMPSTPDLRIRSPHYVHSTRSVDISPTRLHSLALHFRHRSSSLESQGKLLGSENDTGSPDFYTPRTRSSNGSDPMDDCSSCTSHSSSEHYYPAQMNANYSTLAEDSPSKARQRQRQRQRAAGALGSASSGSMPNLAARSGAASTGGGVYLHSQSQPSSQYRIKEYPLYIEGSATPVVVRSLESDQEGHYSVKAQFKTSNSYTAGGLFKESWRGGGDEGDAGRLTPSRSQILRTPSLGRDGAHDKGSGRAAVSDELRQWYQRSTASHKEHSRLSHTSSTSSDSGSQYSTSSQSTFVAHSRVTRMPQMCKATSAALPQSQRSSTPSSEIGATPPSSPHHILTWQTGEATENSPIMDGSESPTHQSTDE
SIO_010081: Frmd4a
subclass of: SO_0000673
so part of: Frmd4a
location: join(1394425..1394490,1434956..1435050,1445574..1445666,1460986..1461070,1477264..1477320,1478473..1478495,1494311..1494394,1498852..1498917,1499516..1499573,1501306..1501392,1524043..1524119,1529699..1529837,1535954..1536095,1549972..1550105,1554327..1554449,1558271..1558499,1560847..1560903,1564543..1564783,1565538..1565702,1567441..1568315,1570069..1570165,1572113..1572182)
location: region:1394425-1572182:1
so has part: feature:1394425-1394490:1:exon
so has part: feature:1434956-1435050:1:exon
so has part: feature:1445574-1445666:1:exon
so has part: feature:1460986-1461070:1:exon
so has part: feature:1477264-1477320:1:exon
so has part: feature:1478473-1478495:1:exon
so has part: feature:1494311-1494394:1:exon
so has part: feature:1498852-1498917:1:exon
so has part: feature:1499516-1499573:1:exon
so has part: feature:1501306-1501392:1:exon
so has part: feature:1524043-1524119:1:exon
so has part: feature:1529699-1529837:1:exon
so has part: feature:1535954-1536095:1:exon
so has part: feature:1549972-1550105:1:exon
so has part: feature:1554327-1554449:1:exon
so has part: feature:1558271-1558499:1:exon
so has part: feature:1560847-1560903:1:exon
so has part: feature:1564543-1564783:1:exon
so has part: feature:1565538-1565702:1:exon
so has part: feature:1567441-1568315:1:exon
so has part: feature:1570069-1570165:1:exon
so has part: feature:1572113-1572182:1:exon

XP_021070986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1394425-1394490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434956-1435050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1445574-1445666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1460986-1461070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1477264-1477320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1478473-1478495:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1494311-1494394:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1498852-1498917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1499516-1499573:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1501306-1501392:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1524043-1524119:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1529699-1529837:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1535954-1536095:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1549972-1550105:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1554327-1554449:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1558271-1558499:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1560847-1560903:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1564543-1564783:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1565538-1565702:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1567441-1568315:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1570069-1570165:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1572113-1572182:1:exon

Prpf18
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Prpf18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1585919..1616905)
location: region:1585919-1616905:-1
so has part: feature:1585919-1616905:-1:exon
subclass of: SO_0000010

110333900
type: Gene
SIO_000068: ncbigene

position:1585919:-1
position: 1585919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1616905:-1
position: 1616905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1585919-1616905:-1:exon

Prpf18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Prpf18
product: pre-mRNA processing factor 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021215678.2
SIO_010081: Prpf18
subclass of: SO_0000673
so part of: Prpf18
location: complement(join(1585919..1587780,1598308..1598463,1600450..1600521,1600649..1600789,1602011..1602079,1603775..1603921,1607609..1607722,1610761..1610865,1613300..1613377,1616712..1616905))
location: region:1585919-1616905:-1
so has part: feature:1616712-1616905:-1:exon
so has part: feature:1613300-1613377:-1:exon
so has part: feature:1610761-1610865:-1:exon
so has part: feature:1607609-1607722:-1:exon
so has part: feature:1603775-1603921:-1:exon
so has part: feature:1602011-1602079:-1:exon
so has part: feature:1600649-1600789:-1:exon
so has part: feature:1600450-1600521:-1:exon
so has part: feature:1598308-1598463:-1:exon
so has part: feature:1585919-1587780:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1616712-1616905:-1:exon

position:1616712:-1
position: 1616712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1613300-1613377:-1:exon

position:1613300:-1
position: 1613300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1613377:-1
position: 1613377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1610761-1610865:-1:exon

position:1610761:-1
position: 1610761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1610865:-1
position: 1610865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1607609-1607722:-1:exon

position:1607609:-1
position: 1607609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607722:-1
position: 1607722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1603775-1603921:-1:exon

position:1603775:-1
position: 1603775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1603921:-1
position: 1603921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1602011-1602079:-1:exon

position:1602011:-1
position: 1602011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1602079:-1
position: 1602079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1600649-1600789:-1:exon

position:1600649:-1
position: 1600649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600789:-1
position: 1600789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1600450-1600521:-1:exon

position:1600450:-1
position: 1600450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600521:-1
position: 1600521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1598308-1598463:-1:exon

position:1598308:-1
position: 1598308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1598463:-1
position: 1598463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1585919-1587780:-1:exon

position:1587780:-1
position: 1587780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Prpf18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Prpf18
product: pre-mRNA processing factor 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029547609.1
SIO_010081: Prpf18
subclass of: SO_0000673
so part of: Prpf18
location: complement(join(1585919..1587780,1598308..1598463,1600450..1600521,1600649..1600789,1602011..1602079,1603775..1603921,1607609..1607722,1610761..1610865,1613156..1613182,1613300..1613377,1616712..1616905))
location: region:1585919-1616905:-1
so has part: feature:1616712-1616905:-1:exon
so has part: feature:1613300-1613377:-1:exon
so has part: feature:1613156-1613182:-1:exon
so has part: feature:1610761-1610865:-1:exon
so has part: feature:1607609-1607722:-1:exon
so has part: feature:1603775-1603921:-1:exon
so has part: feature:1602011-1602079:-1:exon
so has part: feature:1600649-1600789:-1:exon
so has part: feature:1600450-1600521:-1:exon
so has part: feature:1598308-1598463:-1:exon
so has part: feature:1585919-1587780:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1616712-1616905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1613300-1613377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1613156-1613182:-1:exon

position:1613156:-1
position: 1613156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1613182:-1
position: 1613182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1610761-1610865:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1607609-1607722:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1603775-1603921:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1602011-1602079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1600649-1600789:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1600450-1600521:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1598308-1598463:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1585919-1587780:-1:exon

Prpf18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Prpf18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor 18 isoform X2
translation: MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYYERCGYKIQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL
SIO_010081: Prpf18
subclass of: SO_0000673
so part of: Prpf18
location: complement(join(1587700..1587780,1598308..1598463,1600450..1600521,1600649..1600789,1602011..1602079,1603775..1603921,1607609..1607722,1610761..1610865,1613300..1613377,1616712..1616777))
location: region:1587700-1616777:-1
so has part: feature:1616712-1616777:-1:exon
so has part: feature:1613300-1613377:-1:exon
so has part: feature:1610761-1610865:-1:exon
so has part: feature:1607609-1607722:-1:exon
so has part: feature:1603775-1603921:-1:exon
so has part: feature:1602011-1602079:-1:exon
so has part: feature:1600649-1600789:-1:exon
so has part: feature:1600450-1600521:-1:exon
so has part: feature:1598308-1598463:-1:exon
so has part: feature:1587700-1587780:-1:exon

XP_021071337.1
type: Protein
SIO_000068: ncbiprotein

position:1587700:-1
position: 1587700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1616777:-1
position: 1616777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1616712-1616777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1613300-1613377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1610761-1610865:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1607609-1607722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1603775-1603921:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1602011-1602079:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1600649-1600789:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1600450-1600521:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1598308-1598463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1587700-1587780:-1:exon

Prpf18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Prpf18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor 18 isoform X1
translation: MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYYERCGYKPVSEKPSGEIQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL
SIO_010081: Prpf18
subclass of: SO_0000673
so part of: Prpf18
location: complement(join(1587700..1587780,1598308..1598463,1600450..1600521,1600649..1600789,1602011..1602079,1603775..1603921,1607609..1607722,1610761..1610865,1613156..1613182,1613300..1613377,1616712..1616777))
location: region:1587700-1616777:-1
so has part: feature:1616712-1616777:-1:exon
so has part: feature:1613300-1613377:-1:exon
so has part: feature:1613156-1613182:-1:exon
so has part: feature:1610761-1610865:-1:exon
so has part: feature:1607609-1607722:-1:exon
so has part: feature:1603775-1603921:-1:exon
so has part: feature:1602011-1602079:-1:exon
so has part: feature:1600649-1600789:-1:exon
so has part: feature:1600450-1600521:-1:exon
so has part: feature:1598308-1598463:-1:exon
so has part: feature:1587700-1587780:-1:exon

XP_029403469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1616712-1616777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1613300-1613377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1613156-1613182:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1610761-1610865:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1607609-1607722:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1603775-1603921:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1602011-1602079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1600649-1600789:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1600450-1600521:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1598308-1598463:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1587700-1587780:-1:exon

LOC110334317
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110334317
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1643771..1644001)
location: region:1643771-1644001:-1
so has part: feature:1643771-1644001:-1:exon

110334317
type: Gene
SIO_000068: ncbigene

position:1643771:-1
position: 1643771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1644001:-1
position: 1644001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1643771-1644001:-1:exon

LOC110334317
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110334317
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC110334317
subclass of: SO_0000673
so part of: LOC110334317
location: complement(1643771..1644001)
location: region:1643771-1644001:-1
so has part: feature:1643771-1644001:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1643771-1644001:-1:exon

Bend7
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Bend7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1680740..1765642
location: region:1680740-1765642:1
so has part: feature:1680740-1765642:1:exon
subclass of: SO_0000010

110333919
type: Gene
SIO_000068: ncbigene

position:1680740:1
position: 1680740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1765642:1
position: 1765642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1680740-1765642:1:exon

Bend7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Bend7
product: BEN domain containing 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021215705.1
SIO_010081: Bend7
subclass of: SO_0000673
so part of: Bend7
location: join(1680740..1681201,1683432..1683515,1707222..1707524,1711122..1711244,1714364..1714635,1724998..1725223,1750553..1750672,1760080..1760133,1763503..1765642)
location: region:1680740-1765642:1
so has part: feature:1680740-1681201:1:exon
so has part: feature:1683432-1683515:1:exon
so has part: feature:1707222-1707524:1:exon
so has part: feature:1711122-1711244:1:exon
so has part: feature:1714364-1714635:1:exon
so has part: feature:1724998-1725223:1:exon
so has part: feature:1750553-1750672:1:exon
so has part: feature:1760080-1760133:1:exon
so has part: feature:1763503-1765642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1680740-1681201:1:exon

position:1681201:1
position: 1681201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1683432-1683515:1:exon

position:1683432:1
position: 1683432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683515:1
position: 1683515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1707222-1707524:1:exon

position:1707222:1
position: 1707222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1707524:1
position: 1707524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1711122-1711244:1:exon

position:1711122:1
position: 1711122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1711244:1
position: 1711244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1714364-1714635:1:exon

position:1714364:1
position: 1714364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1714635:1
position: 1714635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1724998-1725223:1:exon

position:1724998:1
position: 1724998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1725223:1
position: 1725223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1750553-1750672:1:exon

position:1750553:1
position: 1750553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1750672:1
position: 1750672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1760080-1760133:1:exon

position:1760080:1
position: 1760080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1760133:1
position: 1760133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1763503-1765642:1:exon

position:1763503:1
position: 1763503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Bend7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Bend7
product: BEN domain containing 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021215706.1
SIO_010081: Bend7
subclass of: SO_0000673
so part of: Bend7
location: join(1680740..1681201,1683432..1683515,1707222..1707524,1711122..1711244,1714364..1714635,1724998..1725223,1750553..1750672,1760083..1760133,1763503..1765642)
location: region:1680740-1765642:1
so has part: feature:1680740-1681201:1:exon
so has part: feature:1683432-1683515:1:exon
so has part: feature:1707222-1707524:1:exon
so has part: feature:1711122-1711244:1:exon
so has part: feature:1714364-1714635:1:exon
so has part: feature:1724998-1725223:1:exon
so has part: feature:1750553-1750672:1:exon
so has part: feature:1760083-1760133:1:exon
so has part: feature:1763503-1765642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1680740-1681201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683432-1683515:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1707222-1707524:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1711122-1711244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1714364-1714635:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1724998-1725223:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1750553-1750672:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1760083-1760133:1:exon

position:1760083:1
position: 1760083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1763503-1765642:1:exon

Bend7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Bend7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 7 isoform X1
translation: MEFSERKRSRKSQSFKLVSRDYHHEVYKISEFSNDVNGETRETQPIFLGDESMEIKKQITGMRRLLNDSTGRIYQRVGKEGEKLKEEPQVVDLVWPQRSNSSSEASQGLHPPSRGEWNELPTQSGQFSGQSGPRSRTFQSQPHISASSNGELPGVNSIVGSNCCTCNCQSTLQAILQELKTMRKLMQFQAVGTQNRQQPPISLMCSQRTAVSRKRNKKKKVLPKTVQPVTAVEPKPSPLDIEKKPAASATRPPGLQAAEHTSAEENHVLGFGIVLESPSSDPEVQLAEGFDVFMPKSQLDSILSNYTRSGSLLFRKLVCAFFDDKTLANSLPNGKRKRGFNDNRKGLDQNIVGAIKVFTENYCTANHVDKLPGPRDWVQILQDQIKLARRRLKRGSAEVADGDERLDRISLPPTGHTFVIKRESPEDPEPGSVA
SIO_010081: Bend7
subclass of: SO_0000673
so part of: Bend7
location: join(1681141..1681201,1683432..1683515,1707222..1707524,1711122..1711244,1714364..1714635,1724998..1725223,1750553..1750672,1760080..1760133,1763503..1763564)
location: region:1681141-1763564:1
so has part: feature:1681141-1681201:1:exon
so has part: feature:1683432-1683515:1:exon
so has part: feature:1707222-1707524:1:exon
so has part: feature:1711122-1711244:1:exon
so has part: feature:1714364-1714635:1:exon
so has part: feature:1724998-1725223:1:exon
so has part: feature:1750553-1750672:1:exon
so has part: feature:1760080-1760133:1:exon
so has part: feature:1763503-1763564:1:exon

XP_021071364.1
type: Protein
SIO_000068: ncbiprotein

position:1681141:1
position: 1681141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1763564:1
position: 1763564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1681141-1681201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683432-1683515:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1707222-1707524:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1711122-1711244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1714364-1714635:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1724998-1725223:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1750553-1750672:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1760080-1760133:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1763503-1763564:1:exon

Bend7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Bend7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 7 isoform X2
translation: MEFSERKRSRKSQSFKLVSRDYHHEVYKISEFSNDVNGETRETQPIFLGDESMEIKKQITGMRRLLNDSTGRIYQRVGKEGEKLKEEPQVVDLVWPQRSNSSSEASQGLHPPSRGEWNELPTQSGQFSGQSGPRSRTFQSQPHISASSNGELPGVNSIVGSNCCTCNCQSTLQAILQELKTMRKLMQFQAVGTQNRQQPPISLMCSQRTAVSRKRNKKKKVLPKTVQPVTAVEPKPSPLDIEKKPAASATRPPGLQAAEHTSAEENHVLGFGIVLESPSSDPEVQLAEGFDVFMPKSQLDSILSNYTRSGSLLFRKLVCAFFDDKTLANSLPNGKRKRGFNDNRKGLDQNIVGAIKVFTENYCTANHVDKLPGPRDWVQILQDQIKLARRRLKRGSEVADGDERLDRISLPPTGHTFVIKRESPEDPEPGSVA
SIO_010081: Bend7
subclass of: SO_0000673
so part of: Bend7
location: join(1681141..1681201,1683432..1683515,1707222..1707524,1711122..1711244,1714364..1714635,1724998..1725223,1750553..1750672,1760083..1760133,1763503..1763564)
location: region:1681141-1763564:1
so has part: feature:1681141-1681201:1:exon
so has part: feature:1683432-1683515:1:exon
so has part: feature:1707222-1707524:1:exon
so has part: feature:1711122-1711244:1:exon
so has part: feature:1714364-1714635:1:exon
so has part: feature:1724998-1725223:1:exon
so has part: feature:1750553-1750672:1:exon
so has part: feature:1760083-1760133:1:exon
so has part: feature:1763503-1763564:1:exon

XP_021071365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1681141-1681201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683432-1683515:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1707222-1707524:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1711122-1711244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1714364-1714635:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1724998-1725223:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1750553-1750672:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1760083-1760133:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1763503-1763564:1:exon

Sephs1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Sephs1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1845246..1872239
location: region:1845246-1872239:1
so has part: feature:1845246-1872239:1:exon
subclass of: SO_0000010

110333797
type: Gene
SIO_000068: ncbigene

position:1845246:1
position: 1845246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1872239:1
position: 1872239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1845246-1872239:1:exon

Sephs1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Sephs1
product: selenophosphate synthetase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021215515.1
SIO_010081: Sephs1
subclass of: SO_0000673
so part of: Sephs1
location: join(1845246..1845567,1848213..1848484,1852726..1852829,1854970..1855077,1856427..1856581,1859453..1859543,1861999..1862098,1867057..1867269,1868303..1872239)
location: region:1845246-1872239:1
so has part: feature:1845246-1845567:1:exon
so has part: feature:1848213-1848484:1:exon
so has part: feature:1852726-1852829:1:exon
so has part: feature:1854970-1855077:1:exon
so has part: feature:1856427-1856581:1:exon
so has part: feature:1859453-1859543:1:exon
so has part: feature:1861999-1862098:1:exon
so has part: feature:1867057-1867269:1:exon
so has part: feature:1868303-1872239:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1845246-1845567:1:exon

position:1845567:1
position: 1845567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1848213-1848484:1:exon

position:1848213:1
position: 1848213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1848484:1
position: 1848484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1852726-1852829:1:exon

position:1852726:1
position: 1852726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1852829:1
position: 1852829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1854970-1855077:1:exon

position:1854970:1
position: 1854970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1855077:1
position: 1855077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1856427-1856581:1:exon

position:1856427:1
position: 1856427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1856581:1
position: 1856581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1859453-1859543:1:exon

position:1859453:1
position: 1859453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1859543:1
position: 1859543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1861999-1862098:1:exon

position:1861999:1
position: 1861999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1862098:1
position: 1862098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1867057-1867269:1:exon

position:1867057:1
position: 1867057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1867269:1
position: 1867269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1868303-1872239:1:exon

position:1868303:1
position: 1868303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sephs1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Sephs1
product: selenophosphate synthetase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 27 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021215516.2
SIO_010081: Sephs1
subclass of: SO_0000673
so part of: Sephs1
location: join(1845940..1846300,1848213..1848484,1852726..1852829,1854970..1855077,1856427..1856581,1859453..1859543,1861999..1862098,1867057..1867269,1868303..1872239)
location: region:1845940-1872239:1
so has part: feature:1845940-1846300:1:exon
so has part: feature:1848213-1848484:1:exon
so has part: feature:1852726-1852829:1:exon
so has part: feature:1854970-1855077:1:exon
so has part: feature:1856427-1856581:1:exon
so has part: feature:1859453-1859543:1:exon
so has part: feature:1861999-1862098:1:exon
so has part: feature:1867057-1867269:1:exon
so has part: feature:1868303-1872239:1:exon

position:1845940:1
position: 1845940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1845940-1846300:1:exon

position:1846300:1
position: 1846300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1848213-1848484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1852726-1852829:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1854970-1855077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1856427-1856581:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1859453-1859543:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1861999-1862098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1867057-1867269:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1868303-1872239:1:exon

Sephs1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Sephs1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenide, water dikinase 1 isoform X1
translation: MSTRESFNPETYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGVSNKMTDRERDKVIPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPGATS
SIO_010081: Sephs1
subclass of: SO_0000673
so part of: Sephs1
location: join(1848292..1848484,1852726..1852829,1854970..1855077,1856427..1856581,1859453..1859543,1861999..1862098,1867057..1867269,1868303..1868517)
location: region:1848292-1868517:1
so has part: feature:1848292-1848484:1:exon
so has part: feature:1852726-1852829:1:exon
so has part: feature:1854970-1855077:1:exon
so has part: feature:1856427-1856581:1:exon
so has part: feature:1859453-1859543:1:exon
so has part: feature:1861999-1862098:1:exon
so has part: feature:1867057-1867269:1:exon
so has part: feature:1868303-1868517:1:exon

XP_021071174.1
type: Protein
SIO_000068: ncbiprotein

position:1848292:1
position: 1848292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1868517:1
position: 1868517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1848292-1848484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1852726-1852829:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1854970-1855077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1856427-1856581:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1859453-1859543:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1861999-1862098:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1867057-1867269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1868303-1868517:1:exon

Sephs1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Sephs1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenide, water dikinase 1 isoform X1
translation: MSTRESFNPETYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGVSNKMTDRERDKVIPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPGATS
SIO_010081: Sephs1
subclass of: SO_0000673
so part of: Sephs1
location: join(1848292..1848484,1852726..1852829,1854970..1855077,1856427..1856581,1859453..1859543,1861999..1862098,1867057..1867269,1868303..1868517)
location: region:1848292-1868517:1
so has part: feature:1848292-1848484:1:exon
so has part: feature:1852726-1852829:1:exon
so has part: feature:1854970-1855077:1:exon
so has part: feature:1856427-1856581:1:exon
so has part: feature:1859453-1859543:1:exon
so has part: feature:1861999-1862098:1:exon
so has part: feature:1867057-1867269:1:exon
so has part: feature:1868303-1868517:1:exon

XP_021071175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1848292-1848484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1852726-1852829:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1854970-1855077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1856427-1856581:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1859453-1859543:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1861999-1862098:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1867057-1867269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1868303-1868517:1:exon

Sephs1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Sephs1
product: selenophosphate synthetase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029547465.1
SIO_010081: Sephs1
subclass of: SO_0000673
so part of: Sephs1
location: join(1848398..1848484,1854970..1855077,1856427..1856581,1859453..1859543,1861999..1862098,1867057..1867269,1868303..1868678)
location: region:1848398-1868678:1
so has part: feature:1848398-1848484:1:exon
so has part: feature:1854970-1855077:1:exon
so has part: feature:1856427-1856581:1:exon
so has part: feature:1859453-1859543:1:exon
so has part: feature:1861999-1862098:1:exon
so has part: feature:1867057-1867269:1:exon
so has part: feature:1868303-1868678:1:exon

position:1848398:1
position: 1848398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1868678:1
position: 1868678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1848398-1848484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1854970-1855077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1856427-1856581:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1859453-1859543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1861999-1862098:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1867057-1867269:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1868303-1868678:1:exon

Sephs1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Sephs1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenide, water dikinase 1 isoform X2
translation: MSYRNCWSLYKRTTSKKMSSFWELLCLDLGRIACANVLSDLYAMGVTECDNMLMLLGVSNKMTDRERDKVIPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPGATS
SIO_010081: Sephs1
subclass of: SO_0000673
so part of: Sephs1
location: join(1848398..1848484,1854970..1855077,1856427..1856581,1859453..1859543,1861999..1862098,1867057..1867269,1868303..1868517)
location: region:1848398-1868517:1
so has part: feature:1848398-1848484:1:exon
so has part: feature:1854970-1855077:1:exon
so has part: feature:1856427-1856581:1:exon
so has part: feature:1859453-1859543:1:exon
so has part: feature:1861999-1862098:1:exon
so has part: feature:1867057-1867269:1:exon
so has part: feature:1868303-1868517:1:exon

XP_029403325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1848398-1848484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1854970-1855077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1856427-1856581:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1859453-1859543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1861999-1862098:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1867057-1867269:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1868303-1868517:1:exon

Phyh
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Phyh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1875932..1893197
location: region:1875932-1893197:1
so has part: feature:1875932-1893197:1:exon
subclass of: SO_0000010

110333915
type: Gene
SIO_000068: ncbigene

position:1875932:1
position: 1875932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1893197:1
position: 1893197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1875932-1893197:1:exon

Phyh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Phyh
product: phytanoyl-CoA 2-hydroxylase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021215697.2
SIO_010081: Phyh
subclass of: SO_0000673
so part of: Phyh
location: join(1875932..1876080,1879500..1879558,1882421..1882531,1885287..1885455,1886233..1886314,1888670..1888851,1889688..1889837,1892176..1892307,1892772..1893197)
location: region:1875932-1893197:1
so has part: feature:1875932-1876080:1:exon
so has part: feature:1879500-1879558:1:exon
so has part: feature:1882421-1882531:1:exon
so has part: feature:1885287-1885455:1:exon
so has part: feature:1886233-1886314:1:exon
so has part: feature:1888670-1888851:1:exon
so has part: feature:1889688-1889837:1:exon
so has part: feature:1892176-1892307:1:exon
so has part: feature:1892772-1893197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1875932-1876080:1:exon

position:1876080:1
position: 1876080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1879500-1879558:1:exon

position:1879500:1
position: 1879500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1879558:1
position: 1879558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1882421-1882531:1:exon

position:1882421:1
position: 1882421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1882531:1
position: 1882531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1885287-1885455:1:exon

position:1885287:1
position: 1885287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1885455:1
position: 1885455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1886233-1886314:1:exon

position:1886233:1
position: 1886233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1886314:1
position: 1886314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1888670-1888851:1:exon

position:1888670:1
position: 1888670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1888851:1
position: 1888851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1889688-1889837:1:exon

position:1889688:1
position: 1889688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1889837:1
position: 1889837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1892176-1892307:1:exon

position:1892176:1
position: 1892176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1892307:1
position: 1892307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1892772-1893197:1:exon

position:1892772:1
position: 1892772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Phyh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Phyh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phytanoyl-CoA dioxygenase, peroxisomal
translation: MDLTRAGARLQVLLGHLGRPSAPAIAAHPVSGVASSASFQPEQFQYTLDNNVLSLEQRKFYEENGFLVIKNLVSDDDIDRFRAEFERICRNEVKPPGIMIMRDVALAKQDYIPSEKMVSKIQDFQEDKELFRYCTLPEILKYVECFTGPNIMSVHSMLINKPPDSGKETSRHPLHQDLHYFPFRPSNRIVCAWTAMEHIDRNNGCLVVLPGTHKGTLKTHGYPKWEGGVNKMYHGIQDYDPNSPRIHLVMEKGDTVFFHPLLIHGSGRNRTQGFRKSISCHFSSSDCQVIDVSGTSQENIAREVTEYAEKLYGFQGLDYKDIWRLRSRRVKGERINI
SIO_010081: Phyh
subclass of: SO_0000673
so part of: Phyh
location: join(1876006..1876080,1879500..1879558,1882421..1882531,1885287..1885455,1886233..1886314,1888670..1888851,1889688..1889837,1892176..1892307,1892772..1892825)
location: region:1876006-1892825:1
so has part: feature:1876006-1876080:1:exon
so has part: feature:1879500-1879558:1:exon
so has part: feature:1882421-1882531:1:exon
so has part: feature:1885287-1885455:1:exon
so has part: feature:1886233-1886314:1:exon
so has part: feature:1888670-1888851:1:exon
so has part: feature:1889688-1889837:1:exon
so has part: feature:1892176-1892307:1:exon
so has part: feature:1892772-1892825:1:exon

XP_021071356.1
type: Protein
SIO_000068: ncbiprotein

position:1876006:1
position: 1876006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1892825:1
position: 1892825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1876006-1876080:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1879500-1879558:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1882421-1882531:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1885287-1885455:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1886233-1886314:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1888670-1888851:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1889688-1889837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1892176-1892307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1892772-1892825:1:exon

LOC110334184
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110334184
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1900535..1900792
location: region:1900535-1900792:1
so has part: feature:1900535-1900792:1:exon
subclass of: SO_0000010

110334184
type: Gene
SIO_000068: ncbigene

position:1900535:1
position: 1900535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1900792:1
position: 1900792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1900535-1900792:1:exon

LOC110334184
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: LOC110334184
product: 60S ribosomal protein L36a-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021216049.1
SIO_010081: LOC110334184
subclass of: SO_0000673
so part of: LOC110334184
location: 1900535..1900792
location: region:1900535-1900792:1
so has part: feature:1900535-1900792:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1900535-1900792:1:exon

LOC110334184
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: LOC110334184
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L36a-like
translation: MVSMPKTHQPFCKKCGKHQLHEVTHYRKGKDSLYAQGKWHDDRKQSGYGGQANPIFRKKAKTTKKVVLRLERVEPNCRSKRVLAI
SIO_010081: LOC110334184
subclass of: SO_0000673
so part of: LOC110334184
location: 1900535..1900792
location: region:1900535-1900792:1
so has part: feature:1900535-1900792:1:exon

XP_021071708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1900535-1900792:1:exon

LOC110334195
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110334195
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1908362..1908642)
location: region:1908362-1908642:-1
so has part: feature:1908362-1908642:-1:exon

110334195
type: Gene
SIO_000068: ncbigene

position:1908362:-1
position: 1908362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1908642:-1
position: 1908642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1908362-1908642:-1:exon

LOC110334195
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110334195
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110334195
subclass of: SO_0000673
so part of: LOC110334195
location: complement(1908362..1908642)
location: region:1908362-1908642:-1
so has part: feature:1908362-1908642:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1908362-1908642:-1:exon

Ucma
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Ucma
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1928189..1938297
location: region:1928189-1938297:1
so has part: feature:1928189-1938297:1:exon
subclass of: SO_0000010

110334048
type: Gene
SIO_000068: ncbigene

position:1928189:1
position: 1928189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1938297:1
position: 1938297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1928189-1938297:1:exon

Ucma
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ucma
product: upper zone of growth plate and cartilage matrix associated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 2 Proteins
transcript id: XM_021215884.1
SIO_010081: Ucma
subclass of: SO_0000673
so part of: Ucma
location: join(1928189..1928376,1928718..1928783,1928871..1928966,1933617..1933715,1937857..1938297)
location: region:1928189-1938297:1
so has part: feature:1928189-1928376:1:exon
so has part: feature:1928718-1928783:1:exon
so has part: feature:1928871-1928966:1:exon
so has part: feature:1933617-1933715:1:exon
so has part: feature:1937857-1938297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1928189-1928376:1:exon

position:1928376:1
position: 1928376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1928718-1928783:1:exon

position:1928718:1
position: 1928718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1928783:1
position: 1928783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1928871-1928966:1:exon

position:1928871:1
position: 1928871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1928966:1
position: 1928966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1933617-1933715:1:exon

position:1933617:1
position: 1933617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1933715:1
position: 1933715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1937857-1938297:1:exon

position:1937857:1
position: 1937857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ucma
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ucma
product: upper zone of growth plate and cartilage matrix associated, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein
transcript id: XM_021215886.1
SIO_010081: Ucma
subclass of: SO_0000673
so part of: Ucma
location: join(1928189..1928376,1928718..1928783,1928871..1928966,1937857..1938297)
location: region:1928189-1938297:1
so has part: feature:1928189-1928376:1:exon
so has part: feature:1928718-1928783:1:exon
so has part: feature:1928871-1928966:1:exon
so has part: feature:1937857-1938297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1928189-1928376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1928718-1928783:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1928871-1928966:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1937857-1938297:1:exon

Ucma
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ucma
product: upper zone of growth plate and cartilage matrix associated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 Protein
transcript id: XM_021215885.1
SIO_010081: Ucma
subclass of: SO_0000673
so part of: Ucma
location: join(1928189..1928376,1928871..1928966,1933617..1933715,1937857..1938297)
location: region:1928189-1938297:1
so has part: feature:1928189-1928376:1:exon
so has part: feature:1928871-1928966:1:exon
so has part: feature:1933617-1933715:1:exon
so has part: feature:1937857-1938297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1928189-1928376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1928871-1928966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1933617-1933715:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1937857-1938297:1:exon

Ucma
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ucma
product: upper zone of growth plate and cartilage matrix associated, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein
transcript id: XM_021215887.1
SIO_010081: Ucma
subclass of: SO_0000673
so part of: Ucma
location: join(1928189..1928376,1928871..1928966,1937857..1938297)
location: region:1928189-1938297:1
so has part: feature:1928189-1928376:1:exon
so has part: feature:1928871-1928966:1:exon
so has part: feature:1937857-1938297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1928189-1928376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1928871-1928966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1937857-1938297:1:exon

Ucma
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ucma
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unique cartilage matrix-associated protein isoform X1
translation: MSWRRVILLSSLSALVLLCMLQEGTSASVGSRQAAAEGVPEGVKQKIFMQESDASNFLKRRGKRSPKSRDEVNAENRQKLRDDELRREYYEEQRNEFENFVEEQRDEQEERTREAVEQWRQWHYDGLYPSYLYNRQNI
SIO_010081: Ucma
subclass of: SO_0000673
so part of: Ucma
location: join(1928319..1928376,1928718..1928783,1928871..1928966,1933617..1933715,1937857..1937954)
location: region:1928319-1937954:1
so has part: feature:1928319-1928376:1:exon
so has part: feature:1928718-1928783:1:exon
so has part: feature:1928871-1928966:1:exon
so has part: feature:1933617-1933715:1:exon
so has part: feature:1937857-1937954:1:exon

XP_021071543.1
type: Protein
SIO_000068: ncbiprotein

position:1928319:1
position: 1928319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1937954:1
position: 1937954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1928319-1928376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1928718-1928783:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1928871-1928966:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1933617-1933715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1937857-1937954:1:exon

Ucma
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ucma
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unique cartilage matrix-associated protein isoform X3
translation: MSWRRVILLSSLSALVLLCMLQEGTSASVGSRQAAAEGVPEGVKQKIFMQESDASNFLKRRGKRSPKSRDEVNEQEERTREAVEQWRQWHYDGLYPSYLYNRQNI
SIO_010081: Ucma
subclass of: SO_0000673
so part of: Ucma
location: join(1928319..1928376,1928718..1928783,1928871..1928966,1937857..1937954)
location: region:1928319-1937954:1
so has part: feature:1928319-1928376:1:exon
so has part: feature:1928718-1928783:1:exon
so has part: feature:1928871-1928966:1:exon
so has part: feature:1937857-1937954:1:exon

XP_021071545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1928319-1928376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1928718-1928783:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1928871-1928966:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1937857-1937954:1:exon

Ucma
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ucma
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unique cartilage matrix-associated protein isoform X2
translation: MSWRRVILLSSLSALVLLCSVKQKIFMQESDASNFLKRRGKRSPKSRDEVNAENRQKLRDDELRREYYEEQRNEFENFVEEQRDEQEERTREAVEQWRQWHYDGLYPSYLYNRQNI
SIO_010081: Ucma
subclass of: SO_0000673
so part of: Ucma
location: join(1928319..1928376,1928871..1928966,1933617..1933715,1937857..1937954)
location: region:1928319-1937954:1
so has part: feature:1928319-1928376:1:exon
so has part: feature:1928871-1928966:1:exon
so has part: feature:1933617-1933715:1:exon
so has part: feature:1937857-1937954:1:exon

XP_021071544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1928319-1928376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1928871-1928966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1933617-1933715:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1937857-1937954:1:exon

Ucma
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ucma
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unique cartilage matrix-associated protein isoform X4
translation: MSWRRVILLSSLSALVLLCSVKQKIFMQESDASNFLKRRGKRSPKSRDEVNEQEERTREAVEQWRQWHYDGLYPSYLYNRQNI
SIO_010081: Ucma
subclass of: SO_0000673
so part of: Ucma
location: join(1928319..1928376,1928871..1928966,1937857..1937954)
location: region:1928319-1937954:1
so has part: feature:1928319-1928376:1:exon
so has part: feature:1928871-1928966:1:exon
so has part: feature:1937857-1937954:1:exon

XP_021071546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1928319-1928376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1928871-1928966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1937857-1937954:1:exon

Mcm10
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Mcm10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1944275..1967192)
location: region:1944275-1967192:-1
so has part: feature:1944275-1967192:-1:exon
subclass of: SO_0000010

110333799
type: Gene
SIO_000068: ncbigene

position:1944275:-1
position: 1944275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1967192:-1
position: 1967192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1944275-1967192:-1:exon

Mcm10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Mcm10
product: minichromosome maintenance 10 replication initiation factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 3 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021215521.1
SIO_010081: Mcm10
subclass of: SO_0000673
so part of: Mcm10
location: complement(join(1944275..1945018,1945616..1945658,1946275..1946420,1947125..1947238,1948079..1948191,1949308..1949452,1951226..1951454,1952805..1952913,1953001..1953111,1953870..1953970,1955066..1955262,1955424..1955540,1958313..1958480,1959240..1959405,1960626..1960857,1961528..1961662,1961789..1961893,1962989..1963324,1964760..1964846,1967107..1967192))
location: region:1944275-1967192:-1
so has part: feature:1967107-1967192:-1:exon
so has part: feature:1964760-1964846:-1:exon
so has part: feature:1962989-1963324:-1:exon
so has part: feature:1961789-1961893:-1:exon
so has part: feature:1961528-1961662:-1:exon
so has part: feature:1960626-1960857:-1:exon
so has part: feature:1959240-1959405:-1:exon
so has part: feature:1958313-1958480:-1:exon
so has part: feature:1955424-1955540:-1:exon
so has part: feature:1955066-1955262:-1:exon
so has part: feature:1953870-1953970:-1:exon
so has part: feature:1953001-1953111:-1:exon
so has part: feature:1952805-1952913:-1:exon
so has part: feature:1951226-1951454:-1:exon
so has part: feature:1949308-1949452:-1:exon
so has part: feature:1948079-1948191:-1:exon
so has part: feature:1947125-1947238:-1:exon
so has part: feature:1946275-1946420:-1:exon
so has part: feature:1945616-1945658:-1:exon
so has part: feature:1944275-1945018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1967107-1967192:-1:exon

position:1967107:-1
position: 1967107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1964760-1964846:-1:exon

position:1964760:-1
position: 1964760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1964846:-1
position: 1964846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1962989-1963324:-1:exon

position:1962989:-1
position: 1962989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1963324:-1
position: 1963324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1961789-1961893:-1:exon

position:1961789:-1
position: 1961789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1961893:-1
position: 1961893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1961528-1961662:-1:exon

position:1961528:-1
position: 1961528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1961662:-1
position: 1961662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1960626-1960857:-1:exon

position:1960626:-1
position: 1960626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1960857:-1
position: 1960857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1959240-1959405:-1:exon

position:1959240:-1
position: 1959240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1959405:-1
position: 1959405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1958313-1958480:-1:exon

position:1958313:-1
position: 1958313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1958480:-1
position: 1958480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1955424-1955540:-1:exon

position:1955424:-1
position: 1955424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1955540:-1
position: 1955540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1955066-1955262:-1:exon

position:1955066:-1
position: 1955066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1955262:-1
position: 1955262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1953870-1953970:-1:exon

position:1953870:-1
position: 1953870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1953970:-1
position: 1953970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1953001-1953111:-1:exon

position:1953001:-1
position: 1953001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1953111:-1
position: 1953111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1952805-1952913:-1:exon

position:1952805:-1
position: 1952805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1952913:-1
position: 1952913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1951226-1951454:-1:exon

position:1951226:-1
position: 1951226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1951454:-1
position: 1951454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1949308-1949452:-1:exon

position:1949308:-1
position: 1949308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1949452:-1
position: 1949452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1948079-1948191:-1:exon

position:1948079:-1
position: 1948079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1948191:-1
position: 1948191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1947125-1947238:-1:exon

position:1947125:-1
position: 1947125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1947238:-1
position: 1947238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1946275-1946420:-1:exon

position:1946275:-1
position: 1946275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1946420:-1
position: 1946420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1945616-1945658:-1:exon

position:1945616:-1
position: 1945616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1945658:-1
position: 1945658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1944275-1945018:-1:exon

position:1945018:-1
position: 1945018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mcm10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Mcm10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MCM10 homolog
translation: MDVEEDDLCLLTSLLEENEAALPCSSEENEPLSLGAGDPDEFDELFDADGDGESYTEEADSGEEGTTGNQEERLATLFGDVEDLTDDEVPTSQVEDSAPPAPAPNQEKTNQELQDELKKLQEQMKYLQAQLKAASIKQPPRTAPLQKPPDASLQPQFKEKKIRRIQESACFSAELDVPTLPRAKPVARKPKTYAESSSRTSTPPQPLQVTSSFLEPKSSSSRSSTPSPQAVPGNKCSGIIRNQSTVTPGNSGGPPPQVSHVSVEAFSGLRLRRPRVSSTEMNRKMTGRKLIRLPQIKEKMATENLEETDWVTFGVILKKVTPQSANSGKTFSVWKLNDLRDLTQCVSLFLFGDVHKDLWKTEQGTVIGLLNANPMKPKDGSAEVCLSIDHPQKVLIMGEAMDLGTCKAKKKNGEPCTQIVNLHDCEYCQYHIQAQYKKLSARRSDLQSTFSGGRIPKKFRKGASLKKRLCRDGFYYGGVSSESFAASMAVAIAPKKKVQTTLTNLVVRGTNSIIQETKQKLGIPQKSLSCSEEFRELMALPTFGARNLQKHLARAKSSGGSKPAIQSISASALLKQQKQQMLEMRKRRSEEIEKRFLQNSSEGQSPAVPSSSRQAAAQSPRAGAEFPRLEGTATPRMPKLGRGISEGDDVLFFDESPPPRPKLSSAAEAKKLAAIAKLRAKGQTLTKIDPNNTVRKQMDARAVLGVKERVENSNAVSLEEELEPARKKRREQLAYLESEEFQKILKAKSRHTDVLKEAEAELQKSYFEPLVKKEQMEEKMRATREVKCRVVTCRTCTYTHFKPLETCVSEQHNLHWHDGVKRFFKCPCGNRTISLDKLPNKHCRNCGLYKWERDGMLKEKTGPKIGGETLLPRGEEHAKFLNSLK
SIO_010081: Mcm10
subclass of: SO_0000673
so part of: Mcm10
location: complement(join(1944935..1945018,1945616..1945658,1946275..1946420,1947125..1947238,1948079..1948191,1949308..1949452,1951226..1951454,1952805..1952913,1953001..1953111,1953870..1953970,1955066..1955262,1955424..1955540,1958313..1958480,1959240..1959405,1960626..1960857,1961528..1961662,1961789..1961893,1962989..1963324,1964760..1964766))
location: region:1944935-1964766:-1
so has part: feature:1964760-1964766:-1:exon
so has part: feature:1962989-1963324:-1:exon
so has part: feature:1961789-1961893:-1:exon
so has part: feature:1961528-1961662:-1:exon
so has part: feature:1960626-1960857:-1:exon
so has part: feature:1959240-1959405:-1:exon
so has part: feature:1958313-1958480:-1:exon
so has part: feature:1955424-1955540:-1:exon
so has part: feature:1955066-1955262:-1:exon
so has part: feature:1953870-1953970:-1:exon
so has part: feature:1953001-1953111:-1:exon
so has part: feature:1952805-1952913:-1:exon
so has part: feature:1951226-1951454:-1:exon
so has part: feature:1949308-1949452:-1:exon
so has part: feature:1948079-1948191:-1:exon
so has part: feature:1947125-1947238:-1:exon
so has part: feature:1946275-1946420:-1:exon
so has part: feature:1945616-1945658:-1:exon
so has part: feature:1944935-1945018:-1:exon

XP_021071180.1
type: Protein
SIO_000068: ncbiprotein

position:1944935:-1
position: 1944935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1964766:-1
position: 1964766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1964760-1964766:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1962989-1963324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1961789-1961893:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1961528-1961662:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1960626-1960857:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1959240-1959405:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1958313-1958480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1955424-1955540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1955066-1955262:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1953870-1953970:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1953001-1953111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1952805-1952913:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1951226-1951454:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1949308-1949452:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1948079-1948191:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1947125-1947238:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1946275-1946420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1945616-1945658:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1944935-1945018:-1:exon

Optn
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Optn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1974593..2019273)
location: region:1974593-2019273:-1
so has part: feature:1974593-2019273:-1:exon
subclass of: SO_0000010

110334081
type: Gene
SIO_000068: ncbigene

position:1974593:-1
position: 1974593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2019273:-1
position: 2019273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1974593-2019273:-1:exon

Optn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Optn
product: optineurin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029547689.1
SIO_010081: Optn
subclass of: SO_0000673
so part of: Optn
location: complement(join(1974593..1976303,1979246..1979325,1980182..1980312,1984845..1985003,1987307..1987400,1988444..1988593,1989311..1989426,1990761..1990860,1994970..1995104,1997256..1997326,2000562..2000777,2008518..2008720,2010098..2010274,2019124..2019273))
location: region:1974593-2019273:-1
so has part: feature:2019124-2019273:-1:exon
so has part: feature:2010098-2010274:-1:exon
so has part: feature:2008518-2008720:-1:exon
so has part: feature:2000562-2000777:-1:exon
so has part: feature:1997256-1997326:-1:exon
so has part: feature:1994970-1995104:-1:exon
so has part: feature:1990761-1990860:-1:exon
so has part: feature:1989311-1989426:-1:exon
so has part: feature:1988444-1988593:-1:exon
so has part: feature:1987307-1987400:-1:exon
so has part: feature:1984845-1985003:-1:exon
so has part: feature:1980182-1980312:-1:exon
so has part: feature:1979246-1979325:-1:exon
so has part: feature:1974593-1976303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2019124-2019273:-1:exon

position:2019124:-1
position: 2019124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2010098-2010274:-1:exon

position:2010098:-1
position: 2010098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2010274:-1
position: 2010274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2008518-2008720:-1:exon

position:2008518:-1
position: 2008518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2008720:-1
position: 2008720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2000562-2000777:-1:exon

position:2000562:-1
position: 2000562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2000777:-1
position: 2000777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1997256-1997326:-1:exon

position:1997256:-1
position: 1997256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1997326:-1
position: 1997326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1994970-1995104:-1:exon

position:1994970:-1
position: 1994970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1995104:-1
position: 1995104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1990761-1990860:-1:exon

position:1990761:-1
position: 1990761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1990860:-1
position: 1990860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1989311-1989426:-1:exon

position:1989311:-1
position: 1989311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1989426:-1
position: 1989426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1988444-1988593:-1:exon

position:1988444:-1
position: 1988444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1988593:-1
position: 1988593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1987307-1987400:-1:exon

position:1987307:-1
position: 1987307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1987400:-1
position: 1987400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1984845-1985003:-1:exon

position:1984845:-1
position: 1984845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1985003:-1
position: 1985003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1980182-1980312:-1:exon

position:1980182:-1
position: 1980182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1980312:-1
position: 1980312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1979246-1979325:-1:exon

position:1979246:-1
position: 1979246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1979325:-1
position: 1979325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1974593-1976303:-1:exon

position:1976303:-1
position: 1976303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Optn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Optn
product: optineurin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021215935.2
SIO_010081: Optn
subclass of: SO_0000673
so part of: Optn
location: complement(join(1974593..1976303,1979246..1979328,1980182..1980312,1984845..1985003,1987307..1987400,1988444..1988593,1989311..1989426,1990761..1990860,1994970..1995104,1997256..1997326,2000562..2000777,2008518..2008720,2010098..2010274,2019124..2019273))
location: region:1974593-2019273:-1
so has part: feature:2019124-2019273:-1:exon
so has part: feature:2010098-2010274:-1:exon
so has part: feature:2008518-2008720:-1:exon
so has part: feature:2000562-2000777:-1:exon
so has part: feature:1997256-1997326:-1:exon
so has part: feature:1994970-1995104:-1:exon
so has part: feature:1990761-1990860:-1:exon
so has part: feature:1989311-1989426:-1:exon
so has part: feature:1988444-1988593:-1:exon
so has part: feature:1987307-1987400:-1:exon
so has part: feature:1984845-1985003:-1:exon
so has part: feature:1980182-1980312:-1:exon
so has part: feature:1979246-1979328:-1:exon
so has part: feature:1974593-1976303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2019124-2019273:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2010098-2010274:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2008518-2008720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2000562-2000777:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1997256-1997326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1994970-1995104:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1990761-1990860:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1989311-1989426:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1988444-1988593:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1987307-1987400:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1984845-1985003:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1980182-1980312:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1979246-1979328:-1:exon

position:1979328:-1
position: 1979328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1974593-1976303:-1:exon

Optn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Optn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: optineurin isoform X2
translation: MSHQPLSCLTEKGDSPCETPGNGPSNMVHPSLDTFTPEELLQQMKELLVENHQLKEAMKLNNQAMKGRFEELSAWTEKQKEERLLFEMQSKEAKERLKALSDENERLKEELAKFKEKSEKPFEDLTGDYRYPRGDLEQEVEKLKTQVEQEVDHLKIQVMRLQAEKADLLGIVSELQLKLNSGSSSEDSFVEIRMTEGETEGAMKEMKNCLTPRTDSISMSNCTEAARTCAEFEELTVSQLLLCLREGNQKVERLEVALREAKERISDFEKKANGHSAIEIQTEGRTDKEEDDNGQESVGSEVETLSVQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSATPSELNEKQELVYSNKKLELQVESMRSEIKMEQAKTEEEKSRLATLQATHNKLLQEHNKALKTIEELTKQQAEKVDKMLLQELSEKLELAEQALAAKQLQMDEMKQTIAKQEEDLETMAVLRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAMLLKENNDIEDGSRQSLMEMQCRHGARTSDSDQQAYLFQRGAEDRSWQHGQQPRSIPIHSCPKCGEVLPDMDTLQIHVMDCII
SIO_010081: Optn
subclass of: SO_0000673
so part of: Optn
location: complement(join(1976173..1976303,1979246..1979325,1980182..1980312,1984845..1985003,1987307..1987400,1988444..1988593,1989311..1989426,1990761..1990860,1994970..1995104,1997256..1997326,2000562..2000777,2008518..2008720,2010098..2010263))
location: region:1976173-2010263:-1
so has part: feature:2010098-2010263:-1:exon
so has part: feature:2008518-2008720:-1:exon
so has part: feature:2000562-2000777:-1:exon
so has part: feature:1997256-1997326:-1:exon
so has part: feature:1994970-1995104:-1:exon
so has part: feature:1990761-1990860:-1:exon
so has part: feature:1989311-1989426:-1:exon
so has part: feature:1988444-1988593:-1:exon
so has part: feature:1987307-1987400:-1:exon
so has part: feature:1984845-1985003:-1:exon
so has part: feature:1980182-1980312:-1:exon
so has part: feature:1979246-1979325:-1:exon
so has part: feature:1976173-1976303:-1:exon

XP_029403549.1
type: Protein
SIO_000068: ncbiprotein

position:1976173:-1
position: 1976173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2010263:-1
position: 2010263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2010098-2010263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2008518-2008720:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2000562-2000777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1997256-1997326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1994970-1995104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1990761-1990860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1989311-1989426:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1988444-1988593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1987307-1987400:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1984845-1985003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1980182-1980312:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1979246-1979325:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1976173-1976303:-1:exon

Optn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Optn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: optineurin isoform X1
translation: MSHQPLSCLTEKGDSPCETPGNGPSNMVHPSLDTFTPEELLQQMKELLVENHQLKEAMKLNNQAMKGRFEELSAWTEKQKEERLLFEMQSKEAKERLKALSDENERLKEELAKFKEKSEKPFEDLTGDYRYPRGDLEQEVEKLKTQVEQEVDHLKIQVMRLQAEKADLLGIVSELQLKLNSGSSSEDSFVEIRMTEGETEGAMKEMKNCLTPRTDSISMSNCTEAARTCAEFEELTVSQLLLCLREGNQKVERLEVALREAKERISDFEKKANGHSAIEIQTEGRTDKEEDDNGQESVGSEVETLSVQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSATPSELNEKQELVYSNKKLELQVESMRSEIKMEQAKTEEEKSRLATLQATHNKLLQEHNKALKTIEELTKQQAEKVDKMLLQELSEKLELAEQALAAKQLQMDEMKQTIAKQEEDLETMAVLRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAMLLKENNDIEDGSSRQSLMEMQCRHGARTSDSDQQAYLFQRGAEDRSWQHGQQPRSIPIHSCPKCGEVLPDMDTLQIHVMDCII
SIO_010081: Optn
subclass of: SO_0000673
so part of: Optn
location: complement(join(1976173..1976303,1979246..1979328,1980182..1980312,1984845..1985003,1987307..1987400,1988444..1988593,1989311..1989426,1990761..1990860,1994970..1995104,1997256..1997326,2000562..2000777,2008518..2008720,2010098..2010263))
location: region:1976173-2010263:-1
so has part: feature:2010098-2010263:-1:exon
so has part: feature:2008518-2008720:-1:exon
so has part: feature:2000562-2000777:-1:exon
so has part: feature:1997256-1997326:-1:exon
so has part: feature:1994970-1995104:-1:exon
so has part: feature:1990761-1990860:-1:exon
so has part: feature:1989311-1989426:-1:exon
so has part: feature:1988444-1988593:-1:exon
so has part: feature:1987307-1987400:-1:exon
so has part: feature:1984845-1985003:-1:exon
so has part: feature:1980182-1980312:-1:exon
so has part: feature:1979246-1979328:-1:exon
so has part: feature:1976173-1976303:-1:exon

XP_021071594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2010098-2010263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2008518-2008720:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2000562-2000777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1997256-1997326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1994970-1995104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1990761-1990860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1989311-1989426:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1988444-1988593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1987307-1987400:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1984845-1985003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1980182-1980312:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1979246-1979328:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1976173-1976303:-1:exon

Ccdc3
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Ccdc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2594463..2693572
location: region:2594463-2693572:1
so has part: feature:2594463-2693572:1:exon
subclass of: SO_0000010

110333838
type: Gene
SIO_000068: ncbigene

position:2594463:1
position: 2594463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2693572:1
position: 2693572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2594463-2693572:1:exon

Ccdc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ccdc3
product: coiled-coil domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021215579.1
SIO_010081: Ccdc3
subclass of: SO_0000673
so part of: Ccdc3
location: join(2594463..2594994,2597922..2598096,2688979..2690909)
location: region:2594463-2690909:1
so has part: feature:2594463-2594994:1:exon
so has part: feature:2597922-2598096:1:exon
so has part: feature:2688979-2690909:1:exon

position:2690909:1
position: 2690909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2594463-2594994:1:exon

position:2594994:1
position: 2594994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2597922-2598096:1:exon

position:2597922:1
position: 2597922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2598096:1
position: 2598096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2688979-2690909:1:exon

position:2688979:1
position: 2688979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ccdc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Ccdc3
product: coiled-coil domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029547692.1
SIO_010081: Ccdc3
subclass of: SO_0000673
so part of: Ccdc3
location: join(2594621..2594994,2597922..2598096,2688979..2689254,2692967..2693572)
location: region:2594621-2693572:1
so has part: feature:2594621-2594994:1:exon
so has part: feature:2597922-2598096:1:exon
so has part: feature:2688979-2689254:1:exon
so has part: feature:2692967-2693572:1:exon

position:2594621:1
position: 2594621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2594621-2594994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2597922-2598096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2688979-2689254:1:exon

position:2689254:1
position: 2689254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2692967-2693572:1:exon

position:2692967:1
position: 2692967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ccdc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ccdc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 3
translation: MPLPLLLAALCLAASPAPARACQLPSEWRPLSEGCRAELAETIVYAKVLALHPEVPGLYNYLPWQYQAGEGGLFYSAEVEMLCDQAWGSMLEVPAGSRLNLTGLGYFSCHSHTVVQDYSYFFFVRMDENYNLLPHGVNFQDAIFPDTQENRRVFSSLFQFANCSQGQQLTTFSSDWEIQEDNRLMCSSVQKALFEEEDHVKKLQQKVATLEKRNRQLRERVKKVKRSLRQARKNSRHLELVNQKLSEKLGGSSAQQHINALGREPARAPYLHG
SIO_010081: Ccdc3
subclass of: SO_0000673
so part of: Ccdc3
location: join(2594621..2594994,2597922..2598096,2688979..2689251)
location: region:2594621-2689251:1
so has part: feature:2594621-2594994:1:exon
so has part: feature:2597922-2598096:1:exon
so has part: feature:2688979-2689251:1:exon

XP_021071238.1
type: Protein
SIO_000068: ncbiprotein

position:2689251:1
position: 2689251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2594621-2594994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2597922-2598096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2688979-2689251:1:exon

Ccdc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Ccdc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 3
translation: MPLPLLLAALCLAASPAPARACQLPSEWRPLSEGCRAELAETIVYAKVLALHPEVPGLYNYLPWQYQAGEGGLFYSAEVEMLCDQAWGSMLEVPAGSRLNLTGLGYFSCHSHTVVQDYSYFFFVRMDENYNLLPHGVNFQDAIFPDTQENRRVFSSLFQFANCSQGQQLTTFSSDWEIQEDNRLMCSSVQKALFEEEDHVKKLQQKVATLEKRNRQLRERVKKVKRSLRQARKNSRHLELVNQKLSEKLGGSSAQQHINALGREPARAPYLHG
SIO_010081: Ccdc3
subclass of: SO_0000673
so part of: Ccdc3
location: join(2594621..2594994,2597922..2598096,2688979..2689251)
location: region:2594621-2689251:1
so has part: feature:2594621-2594994:1:exon
so has part: feature:2597922-2598096:1:exon
so has part: feature:2688979-2689251:1:exon

XP_029403552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2594621-2594994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2597922-2598096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2688979-2689251:1:exon

LOC110333831
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110333831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2613075..2614163
location: region:2613075-2614163:1
so has part: feature:2613075-2614163:1:exon

110333831
type: Gene
SIO_000068: ncbigene

position:2613075:1
position: 2613075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2614163:1
position: 2614163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2613075-2614163:1:exon

LOC110333831
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110333831
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110333831
subclass of: SO_0000673
so part of: LOC110333831
location: 2613075..2613423
location: region:2613075-2613423:1
so has part: feature:2613075-2613423:1:exon

position:2613423:1
position: 2613423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2613075-2613423:1:exon

LOC110333831
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110333831
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110333831
subclass of: SO_0000673
so part of: LOC110333831
location: 2613752..2614163
location: region:2613752-2614163:1
so has part: feature:2613752-2614163:1:exon

position:2613752:1
position: 2613752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2613752-2614163:1:exon

LOC110334234
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110334234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2725805..2730542)
location: region:2725805-2730542:-1
so has part: feature:2725805-2730542:-1:exon

110334234
type: Gene
SIO_000068: ncbigene

position:2725805:-1
position: 2725805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2730542:-1
position: 2730542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2725805-2730542:-1:exon

LOC110334234
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110334234
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110334234
subclass of: SO_0000673
so part of: LOC110334234
location: complement(2725805..2726223)
location: region:2725805-2726223:-1
so has part: feature:2725805-2726223:-1:exon

position:2726223:-1
position: 2726223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2725805-2726223:-1:exon

LOC115065642
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115065642
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2726788..2726973)
location: region:2726788-2726973:-1
so has part: feature:2726788-2726973:-1:exon
subclass of: SO_0000623

115065642
type: Gene
SIO_000068: ncbigene

position:2726788:-1
position: 2726788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2726973:-1
position: 2726973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2726788-2726973:-1:exon

LOC115065642
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snRNA
gene: LOC115065642
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003845412.1
SIO_010081: LOC115065642
subclass of: SO_0000673
so part of: LOC115065642
location: complement(2726788..2726973)
location: region:2726788-2726973:-1
so has part: feature:2726788-2726973:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2726788-2726973:-1:exon

LOC110334234
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110334234
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110334234
subclass of: SO_0000673
so part of: LOC110334234
location: complement(2730443..2730542)
location: region:2730443-2730542:-1
so has part: feature:2730443-2730542:-1:exon

position:2730443:-1
position: 2730443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2730443-2730542:-1:exon

LOC110334235
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110334235
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2745713..2746126
location: region:2745713-2746126:1
so has part: feature:2745713-2746126:1:exon

110334235
type: Gene
SIO_000068: ncbigene

position:2745713:1
position: 2745713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2746126:1
position: 2746126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2745713-2746126:1:exon

LOC110334235
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110334235
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC110334235
subclass of: SO_0000673
so part of: LOC110334235
location: 2745713..2746126
location: region:2745713-2746126:1
so has part: feature:2745713-2746126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2745713-2746126:1:exon

Camk1d
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Camk1d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2758770..3158742)
location: region:2758770-3158742:-1
so has part: feature:2758770-3158742:-1:exon
subclass of: SO_0000010

110333755
type: Gene
SIO_000068: ncbigene

position:2758770:-1
position: 2758770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3158742:-1
position: 3158742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2758770-3158742:-1:exon

Camk1d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Camk1d
product: calcium/calmodulin dependent protein kinase ID, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021215448.2
SIO_010081: Camk1d
subclass of: SO_0000673
so part of: Camk1d
location: complement(join(2758770..2760629,2763045..2763119,2764869..2764956,2772886..2772964,2774783..2774895,2794079..2794154,2809994..2810120,2817330..2817468,2894411..2894485,3010531..3010662,3158358..3158742))
location: region:2758770-3158742:-1
so has part: feature:3158358-3158742:-1:exon
so has part: feature:3010531-3010662:-1:exon
so has part: feature:2894411-2894485:-1:exon
so has part: feature:2817330-2817468:-1:exon
so has part: feature:2809994-2810120:-1:exon
so has part: feature:2794079-2794154:-1:exon
so has part: feature:2774783-2774895:-1:exon
so has part: feature:2772886-2772964:-1:exon
so has part: feature:2764869-2764956:-1:exon
so has part: feature:2763045-2763119:-1:exon
so has part: feature:2758770-2760629:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3158358-3158742:-1:exon

position:3158358:-1
position: 3158358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3010531-3010662:-1:exon

position:3010531:-1
position: 3010531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3010662:-1
position: 3010662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2894411-2894485:-1:exon

position:2894411:-1
position: 2894411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2894485:-1
position: 2894485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2817330-2817468:-1:exon

position:2817330:-1
position: 2817330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2817468:-1
position: 2817468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2809994-2810120:-1:exon

position:2809994:-1
position: 2809994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2810120:-1
position: 2810120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2794079-2794154:-1:exon

position:2794079:-1
position: 2794079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2794154:-1
position: 2794154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2774783-2774895:-1:exon

position:2774783:-1
position: 2774783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2774895:-1
position: 2774895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2772886-2772964:-1:exon

position:2772886:-1
position: 2772886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2772964:-1
position: 2772964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2764869-2764956:-1:exon

position:2764869:-1
position: 2764869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2764956:-1
position: 2764956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2763045-2763119:-1:exon

position:2763045:-1
position: 2763045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2763119:-1
position: 2763119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2758770-2760629:-1:exon

position:2760629:-1
position: 2760629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Camk1d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Camk1d
product: calcium/calmodulin dependent protein kinase ID, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021215445.2
SIO_010081: Camk1d
subclass of: SO_0000673
so part of: Camk1d
location: complement(join(2759989..2760629,2763002..2763119,2764869..2764956,2772886..2772964,2774783..2774895,2794079..2794154,2809994..2810120,2817330..2817468,2894411..2894485,3010531..3010662,3158358..3158742))
location: region:2759989-3158742:-1
so has part: feature:3158358-3158742:-1:exon
so has part: feature:3010531-3010662:-1:exon
so has part: feature:2894411-2894485:-1:exon
so has part: feature:2817330-2817468:-1:exon
so has part: feature:2809994-2810120:-1:exon
so has part: feature:2794079-2794154:-1:exon
so has part: feature:2774783-2774895:-1:exon
so has part: feature:2772886-2772964:-1:exon
so has part: feature:2764869-2764956:-1:exon
so has part: feature:2763002-2763119:-1:exon
so has part: feature:2759989-2760629:-1:exon

position:2759989:-1
position: 2759989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3158358-3158742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3010531-3010662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2894411-2894485:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2817330-2817468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2809994-2810120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2794079-2794154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2774783-2774895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2772886-2772964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2764869-2764956:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2763002-2763119:-1:exon

position:2763002:-1
position: 2763002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2759989-2760629:-1:exon

Camk1d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Camk1d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent protein kinase type 1D isoform X1
translation: MARENGESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTERDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRRLQLGSSLDSSNASVSSNLSLASQKDCLAPSTLCSFLSSSSGVAGVGAERRPRPTTVTTGHTGSK
SIO_010081: Camk1d
subclass of: SO_0000673
so part of: Camk1d
location: complement(join(2760511..2760629,2763002..2763119,2764869..2764956,2772886..2772964,2774783..2774895,2794079..2794154,2809994..2810120,2817330..2817468,2894411..2894485,3010531..3010662,3158358..3158449))
location: region:2760511-3158449:-1
so has part: feature:3158358-3158449:-1:exon
so has part: feature:3010531-3010662:-1:exon
so has part: feature:2894411-2894485:-1:exon
so has part: feature:2817330-2817468:-1:exon
so has part: feature:2809994-2810120:-1:exon
so has part: feature:2794079-2794154:-1:exon
so has part: feature:2774783-2774895:-1:exon
so has part: feature:2772886-2772964:-1:exon
so has part: feature:2764869-2764956:-1:exon
so has part: feature:2763002-2763119:-1:exon
so has part: feature:2760511-2760629:-1:exon

XP_021071104.1
type: Protein
SIO_000068: ncbiprotein

position:2760511:-1
position: 2760511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3158449:-1
position: 3158449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3158358-3158449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3010531-3010662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2894411-2894485:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2817330-2817468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2809994-2810120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2794079-2794154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2774783-2774895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2772886-2772964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2764869-2764956:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2763002-2763119:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2760511-2760629:-1:exon

Camk1d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Camk1d
product: calcium/calmodulin dependent protein kinase ID, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029547469.1
SIO_010081: Camk1d
subclass of: SO_0000673
so part of: Camk1d
location: complement(join(2760516..2760629,2762998..2763119,2764869..2764956,2772886..2772964,2774783..2774895,2794079..2794154,2809994..2810120,2817330..2817468,2894411..2894485,3010531..3010662,3158358..3158742))
location: region:2760516-3158742:-1
so has part: feature:3158358-3158742:-1:exon
so has part: feature:3010531-3010662:-1:exon
so has part: feature:2894411-2894485:-1:exon
so has part: feature:2817330-2817468:-1:exon
so has part: feature:2809994-2810120:-1:exon
so has part: feature:2794079-2794154:-1:exon
so has part: feature:2774783-2774895:-1:exon
so has part: feature:2772886-2772964:-1:exon
so has part: feature:2764869-2764956:-1:exon
so has part: feature:2762998-2763119:-1:exon
so has part: feature:2760516-2760629:-1:exon

position:2760516:-1
position: 2760516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3158358-3158742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3010531-3010662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2894411-2894485:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2817330-2817468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2809994-2810120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2794079-2794154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2774783-2774895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2772886-2772964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2764869-2764956:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2762998-2763119:-1:exon

position:2762998:-1
position: 2762998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2760516-2760629:-1:exon

Camk1d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Camk1d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent protein kinase type 1D isoform X2
translation: MARENGESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTERDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRRLQLGSSLDSSNVWHLPRSVVSFLLRRGSQESELRGDPGPPL
SIO_010081: Camk1d
subclass of: SO_0000673
so part of: Camk1d
location: complement(join(2760537..2760629,2763045..2763119,2764869..2764956,2772886..2772964,2774783..2774895,2794079..2794154,2809994..2810120,2817330..2817468,2894411..2894485,3010531..3010662,3158358..3158449))
location: region:2760537-3158449:-1
so has part: feature:3158358-3158449:-1:exon
so has part: feature:3010531-3010662:-1:exon
so has part: feature:2894411-2894485:-1:exon
so has part: feature:2817330-2817468:-1:exon
so has part: feature:2809994-2810120:-1:exon
so has part: feature:2794079-2794154:-1:exon
so has part: feature:2774783-2774895:-1:exon
so has part: feature:2772886-2772964:-1:exon
so has part: feature:2764869-2764956:-1:exon
so has part: feature:2763045-2763119:-1:exon
so has part: feature:2760537-2760629:-1:exon

XP_021071107.1
type: Protein
SIO_000068: ncbiprotein

position:2760537:-1
position: 2760537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3158358-3158449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3010531-3010662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2894411-2894485:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2817330-2817468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2809994-2810120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2794079-2794154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2774783-2774895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2772886-2772964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2764869-2764956:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2763045-2763119:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2760537-2760629:-1:exon

Camk1d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Camk1d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent protein kinase type 1D isoform X3
translation: MARENGESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTERDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRRLQLGSSLDSSNASVSSNLSLASQKDCASGTFHAL
SIO_010081: Camk1d
subclass of: SO_0000673
so part of: Camk1d
location: complement(join(2760605..2760629,2762998..2763119,2764869..2764956,2772886..2772964,2774783..2774895,2794079..2794154,2809994..2810120,2817330..2817468,2894411..2894485,3010531..3010662,3158358..3158449))
location: region:2760605-3158449:-1
so has part: feature:3158358-3158449:-1:exon
so has part: feature:3010531-3010662:-1:exon
so has part: feature:2894411-2894485:-1:exon
so has part: feature:2817330-2817468:-1:exon
so has part: feature:2809994-2810120:-1:exon
so has part: feature:2794079-2794154:-1:exon
so has part: feature:2774783-2774895:-1:exon
so has part: feature:2772886-2772964:-1:exon
so has part: feature:2764869-2764956:-1:exon
so has part: feature:2762998-2763119:-1:exon
so has part: feature:2760605-2760629:-1:exon

XP_029403329.1
type: Protein
SIO_000068: ncbiprotein

position:2760605:-1
position: 2760605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3158358-3158449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3010531-3010662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2894411-2894485:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2817330-2817468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2809994-2810120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2794079-2794154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2774783-2774895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2772886-2772964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2764869-2764956:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2762998-2763119:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2760605-2760629:-1:exon

Cdc123
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Cdc123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3232726..3284018)
location: region:3232726-3284018:-1
so has part: feature:3232726-3284018:-1:exon
subclass of: SO_0000010

110333661
type: Gene
SIO_000068: ncbigene

position:3232726:-1
position: 3232726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3284018:-1
position: 3284018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3232726-3284018:-1:exon

Cdc123
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Cdc123
product: cell division cycle 123, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029547357.1
SIO_010081: Cdc123
subclass of: SO_0000673
so part of: Cdc123
location: complement(join(3232726..3233293,3233839..3233976,3236710..3236838,3242518..3242546,3245555..3245630,3249277..3249325,3259684..3259790,3261562..3261657,3270547..3270579,3271121..3271178,3280398..3280469,3283679..3284018))
location: region:3232726-3284018:-1
so has part: feature:3283679-3284018:-1:exon
so has part: feature:3280398-3280469:-1:exon
so has part: feature:3271121-3271178:-1:exon
so has part: feature:3270547-3270579:-1:exon
so has part: feature:3261562-3261657:-1:exon
so has part: feature:3259684-3259790:-1:exon
so has part: feature:3249277-3249325:-1:exon
so has part: feature:3245555-3245630:-1:exon
so has part: feature:3242518-3242546:-1:exon
so has part: feature:3236710-3236838:-1:exon
so has part: feature:3233839-3233976:-1:exon
so has part: feature:3232726-3233293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3283679-3284018:-1:exon

position:3283679:-1
position: 3283679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3280398-3280469:-1:exon

position:3280398:-1
position: 3280398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3280469:-1
position: 3280469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3271121-3271178:-1:exon

position:3271121:-1
position: 3271121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3271178:-1
position: 3271178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3270547-3270579:-1:exon

position:3270547:-1
position: 3270547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3270579:-1
position: 3270579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3261562-3261657:-1:exon

position:3261562:-1
position: 3261562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3261657:-1
position: 3261657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3259684-3259790:-1:exon

position:3259684:-1
position: 3259684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3259790:-1
position: 3259790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3249277-3249325:-1:exon

position:3249277:-1
position: 3249277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3249325:-1
position: 3249325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3245555-3245630:-1:exon

position:3245555:-1
position: 3245555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3245630:-1
position: 3245630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3242518-3242546:-1:exon

position:3242518:-1
position: 3242518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3242546:-1
position: 3242546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3236710-3236838:-1:exon

position:3236710:-1
position: 3236710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3236838:-1
position: 3236838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3233839-3233976:-1:exon

position:3233839:-1
position: 3233839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3233976:-1
position: 3233976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3232726-3233293:-1:exon

position:3233293:-1
position: 3233293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cdc123
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Cdc123
product: cell division cycle 123, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021215333.2
SIO_010081: Cdc123
subclass of: SO_0000673
so part of: Cdc123
location: complement(join(3233081..3233293,3233839..3233976,3236710..3236838,3242518..3242546,3243438..3243560,3245555..3245630,3249277..3249325,3259684..3259790,3261562..3261657,3270547..3270579,3271121..3271178,3280398..3280469,3283679..3284018))
location: region:3233081-3284018:-1
so has part: feature:3283679-3284018:-1:exon
so has part: feature:3280398-3280469:-1:exon
so has part: feature:3271121-3271178:-1:exon
so has part: feature:3270547-3270579:-1:exon
so has part: feature:3261562-3261657:-1:exon
so has part: feature:3259684-3259790:-1:exon
so has part: feature:3249277-3249325:-1:exon
so has part: feature:3245555-3245630:-1:exon
so has part: feature:3243438-3243560:-1:exon
so has part: feature:3242518-3242546:-1:exon
so has part: feature:3236710-3236838:-1:exon
so has part: feature:3233839-3233976:-1:exon
so has part: feature:3233081-3233293:-1:exon

position:3233081:-1
position: 3233081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3283679-3284018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3280398-3280469:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3271121-3271178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3270547-3270579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3261562-3261657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3259684-3259790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3249277-3249325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3245555-3245630:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3243438-3243560:-1:exon

position:3243438:-1
position: 3243438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3243560:-1
position: 3243560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3242518-3242546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3236710-3236838:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3233839-3233976:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3233081-3233293:-1:exon

Cdc123
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Cdc123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle protein 123 homolog isoform X2
translation: MKKEHVSHCQFSAWYPLFRSLTIKSVILPLPQNVKDYLLDDGTLVVSGREDPPACSQSDSGDEAEETQWSDDESTATLTAPEFPEFNTQVQEAINSLGGSVFPKLNWSAPRDAHWIAMNSSLKCKTLSDIFLLFKSSDFITHDFTQPFIHCTDDSPDPCIEYELVLRKWCELIPGAEFRCFVKENKLIVVFDIHRDSRGKVWLIDFNPFGEVTDSLLFTWEELTSENNLRGDVTEGDAQEQDSPAFRCTNSEVTVQPSPYLSYGLPKDFVDLSTGEDAHKLIDFLKLKRNQQEDD
SIO_010081: Cdc123
subclass of: SO_0000673
so part of: Cdc123
location: complement(join(3233267..3233293,3233839..3233976,3236710..3236838,3242518..3242546,3245555..3245630,3249277..3249325,3259684..3259790,3261562..3261657,3270547..3270579,3271121..3271178,3280398..3280469,3283679..3283752))
location: region:3233267-3283752:-1
so has part: feature:3283679-3283752:-1:exon
so has part: feature:3280398-3280469:-1:exon
so has part: feature:3271121-3271178:-1:exon
so has part: feature:3270547-3270579:-1:exon
so has part: feature:3261562-3261657:-1:exon
so has part: feature:3259684-3259790:-1:exon
so has part: feature:3249277-3249325:-1:exon
so has part: feature:3245555-3245630:-1:exon
so has part: feature:3242518-3242546:-1:exon
so has part: feature:3236710-3236838:-1:exon
so has part: feature:3233839-3233976:-1:exon
so has part: feature:3233267-3233293:-1:exon

XP_029403217.1
type: Protein
SIO_000068: ncbiprotein

position:3233267:-1
position: 3233267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3283752:-1
position: 3283752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3283679-3283752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3280398-3280469:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3271121-3271178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3270547-3270579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3261562-3261657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3259684-3259790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3249277-3249325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3245555-3245630:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3242518-3242546:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3236710-3236838:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3233839-3233976:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3233267-3233293:-1:exon

Cdc123
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Cdc123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle protein 123 homolog isoform X1
translation: MKKEHVSHCQFSAWYPLFRSLTIKSVILPLPQNVKDYLLDDGTLVVSGREDPPACSQSDSGDEAEETQWSDDESTATLTAPEFPEFNTQVQEAINSLGGSVFPKLNWSAPRDAHWIAMNSSLKCKTLSDIFLLFKSSDFITHDFTQPFIHCTDDSPDPCIEYELVLRKWCELIPGAEFRCFVKENKLIGISQRDYTQYYDHISKQKEDICRCIQDFFKEHLQYKFLDEDFVFDIHRDSRGKVWLIDFNPFGEVTDSLLFTWEELTSENNLRGDVTEGDAQEQDSPAFRCTNSEVTVQPSPYLSYGLPKDFVDLSTGEDAHKLIDFLKLKRNQQEDD
SIO_010081: Cdc123
subclass of: SO_0000673
so part of: Cdc123
location: complement(join(3233267..3233293,3233839..3233976,3236710..3236838,3242518..3242546,3243438..3243560,3245555..3245630,3249277..3249325,3259684..3259790,3261562..3261657,3270547..3270579,3271121..3271178,3280398..3280469,3283679..3283752))
location: region:3233267-3283752:-1
so has part: feature:3283679-3283752:-1:exon
so has part: feature:3280398-3280469:-1:exon
so has part: feature:3271121-3271178:-1:exon
so has part: feature:3270547-3270579:-1:exon
so has part: feature:3261562-3261657:-1:exon
so has part: feature:3259684-3259790:-1:exon
so has part: feature:3249277-3249325:-1:exon
so has part: feature:3245555-3245630:-1:exon
so has part: feature:3243438-3243560:-1:exon
so has part: feature:3242518-3242546:-1:exon
so has part: feature:3236710-3236838:-1:exon
so has part: feature:3233839-3233976:-1:exon
so has part: feature:3233267-3233293:-1:exon

XP_021070992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3283679-3283752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3280398-3280469:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3271121-3271178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3270547-3270579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3261562-3261657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3259684-3259790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3249277-3249325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3245555-3245630:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3243438-3243560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3242518-3242546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3236710-3236838:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3233839-3233976:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3233267-3233293:-1:exon

LOC110333659
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110333659
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3252288..3254809)
location: region:3252288-3254809:-1
so has part: feature:3252288-3254809:-1:exon

110333659
type: Gene
SIO_000068: ncbigene

position:3252288:-1
position: 3252288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3254809:-1
position: 3254809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3252288-3254809:-1:exon

LOC110333659
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 10093
gene: LOC110333659
product: hepatocyte growth factor-regulated tyrosine kinase substrate pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_002381100.2
SIO_010081: LOC110333659
so part of: LOC110333659
location: complement(3252288..3254809)
location: region:3252288-3254809:-1
so has part: feature:3252288-3254809:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3252288-3254809:-1:exon

Nudt5
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Nudt5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3283877..3307028
location: region:3283877-3307028:1
so has part: feature:3283877-3307028:1:exon
subclass of: SO_0000010

110333951
type: Gene
SIO_000068: ncbigene

position:3283877:1
position: 3283877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3307028:1
position: 3307028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3283877-3307028:1:exon

Nudt5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Nudt5
product: nudix hydrolase 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021215744.1
SIO_010081: Nudt5
subclass of: SO_0000673
so part of: Nudt5
location: join(3283877..3284231,3293730..3293833,3295084..3295151,3299472..3299521,3300738..3300845,3302232..3302327,3302859..3302960,3304571..3304579,3304688..3304741,3306385..3307028)
location: region:3283877-3307028:1
so has part: feature:3283877-3284231:1:exon
so has part: feature:3293730-3293833:1:exon
so has part: feature:3295084-3295151:1:exon
so has part: feature:3299472-3299521:1:exon
so has part: feature:3300738-3300845:1:exon
so has part: feature:3302232-3302327:1:exon
so has part: feature:3302859-3302960:1:exon
so has part: feature:3304571-3304579:1:exon
so has part: feature:3304688-3304741:1:exon
so has part: feature:3306385-3307028:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3283877-3284231:1:exon

position:3284231:1
position: 3284231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3293730-3293833:1:exon

position:3293730:1
position: 3293730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3293833:1
position: 3293833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3295084-3295151:1:exon

position:3295084:1
position: 3295084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3295151:1
position: 3295151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3299472-3299521:1:exon

position:3299472:1
position: 3299472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3299521:1
position: 3299521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3300738-3300845:1:exon

position:3300738:1
position: 3300738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3300845:1
position: 3300845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3302232-3302327:1:exon

position:3302232:1
position: 3302232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3302327:1
position: 3302327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3302859-3302960:1:exon

position:3302859:1
position: 3302859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3302960:1
position: 3302960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3304571-3304579:1:exon

position:3304571:1
position: 3304571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3304579:1
position: 3304579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3304688-3304741:1:exon

position:3304688:1
position: 3304688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3304741:1
position: 3304741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3306385-3307028:1:exon

position:3306385:1
position: 3306385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nudt5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Nudt5
product: nudix hydrolase 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029547359.1
SIO_010081: Nudt5
subclass of: SO_0000673
so part of: Nudt5
location: join(3284112..3284231,3287021..3287103,3293730..3293833,3295084..3295151,3299472..3299521,3300738..3300845,3302232..3302327,3302859..3302960,3304571..3304579,3304688..3304741,3306385..3307028)
location: region:3284112-3307028:1
so has part: feature:3284112-3284231:1:exon
so has part: feature:3287021-3287103:1:exon
so has part: feature:3293730-3293833:1:exon
so has part: feature:3295084-3295151:1:exon
so has part: feature:3299472-3299521:1:exon
so has part: feature:3300738-3300845:1:exon
so has part: feature:3302232-3302327:1:exon
so has part: feature:3302859-3302960:1:exon
so has part: feature:3304571-3304579:1:exon
so has part: feature:3304688-3304741:1:exon
so has part: feature:3306385-3307028:1:exon

position:3284112:1
position: 3284112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3284112-3284231:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3287021-3287103:1:exon

position:3287021:1
position: 3287021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3287103:1
position: 3287103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3293730-3293833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3295084-3295151:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3299472-3299521:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300738-3300845:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3302232-3302327:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3302859-3302960:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3304571-3304579:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3304688-3304741:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3306385-3307028:1:exon

Nudt5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Nudt5
product: nudix hydrolase 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029547358.1
SIO_010081: Nudt5
subclass of: SO_0000673
so part of: Nudt5
location: join(3284112..3284231,3287034..3287103,3293730..3293833,3295084..3295151,3299472..3299521,3300738..3300845,3302232..3302327,3302859..3302960,3304571..3304579,3304688..3304741,3306385..3307028)
location: region:3284112-3307028:1
so has part: feature:3284112-3284231:1:exon
so has part: feature:3287034-3287103:1:exon
so has part: feature:3293730-3293833:1:exon
so has part: feature:3295084-3295151:1:exon
so has part: feature:3299472-3299521:1:exon
so has part: feature:3300738-3300845:1:exon
so has part: feature:3302232-3302327:1:exon
so has part: feature:3302859-3302960:1:exon
so has part: feature:3304571-3304579:1:exon
so has part: feature:3304688-3304741:1:exon
so has part: feature:3306385-3307028:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3284112-3284231:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3287034-3287103:1:exon

position:3287034:1
position: 3287034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3293730-3293833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3295084-3295151:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3299472-3299521:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300738-3300845:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3302232-3302327:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3302859-3302960:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3304571-3304579:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3304688-3304741:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3306385-3307028:1:exon

Nudt5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Nudt5
product: nudix hydrolase 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029547361.1
SIO_010081: Nudt5
subclass of: SO_0000673
so part of: Nudt5
location: join(3284112..3284231,3287034..3287103,3293730..3293833,3295084..3295151,3299472..3299521,3300738..3300845,3302232..3302327,3302859..3302960,3304688..3304741,3306385..3307028)
location: region:3284112-3307028:1
so has part: feature:3284112-3284231:1:exon
so has part: feature:3287034-3287103:1:exon
so has part: feature:3293730-3293833:1:exon
so has part: feature:3295084-3295151:1:exon
so has part: feature:3299472-3299521:1:exon
so has part: feature:3300738-3300845:1:exon
so has part: feature:3302232-3302327:1:exon
so has part: feature:3302859-3302960:1:exon
so has part: feature:3304688-3304741:1:exon
so has part: feature:3306385-3307028:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3284112-3284231:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3287034-3287103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3293730-3293833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3295084-3295151:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3299472-3299521:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300738-3300845:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3302232-3302327:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3302859-3302960:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3304688-3304741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3306385-3307028:1:exon

Nudt5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Nudt5
product: nudix hydrolase 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029547360.1
SIO_010081: Nudt5
subclass of: SO_0000673
so part of: Nudt5
location: join(3292981..3293246,3293730..3293833,3295084..3295151,3299472..3299521,3300738..3300845,3302232..3302327,3302859..3302960,3304571..3304579,3304688..3304741,3306385..3307028)
location: region:3292981-3307028:1
so has part: feature:3292981-3293246:1:exon
so has part: feature:3293730-3293833:1:exon
so has part: feature:3295084-3295151:1:exon
so has part: feature:3299472-3299521:1:exon
so has part: feature:3300738-3300845:1:exon
so has part: feature:3302232-3302327:1:exon
so has part: feature:3302859-3302960:1:exon
so has part: feature:3304571-3304579:1:exon
so has part: feature:3304688-3304741:1:exon
so has part: feature:3306385-3307028:1:exon

position:3292981:1
position: 3292981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3292981-3293246:1:exon

position:3293246:1
position: 3293246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3293730-3293833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3295084-3295151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3299472-3299521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3300738-3300845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3302232-3302327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3302859-3302960:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3304571-3304579:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3304688-3304741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3306385-3307028:1:exon

Nudt5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Nudt5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-sugar pyrophosphatase isoform X1
translation: METQESTGSSPPAKHRVISEEMISEGKWVKFEKTTYMDPTGKTRTWETVKLTTRKGKSADAVSVIPVLQRTLHHECVVLVKQFRPPMGSYCLEFPAGFIEDGESPEAAALRELEEETGYKGEVAECSPAVCMDPGLSNCTTHVVTVTINGDDAGNVRPKPKPGDGEFMEVISLPKNDLLTRLDALGAEQHLTVDAKVYAYGLALKHANSKPFEVPFLKF
SIO_010081: Nudt5
subclass of: SO_0000673
so part of: Nudt5
location: join(3293771..3293833,3295084..3295151,3299472..3299521,3300738..3300845,3302232..3302327,3302859..3302960,3304571..3304579,3304688..3304741,3306385..3306494)
location: region:3293771-3306494:1
so has part: feature:3293771-3293833:1:exon
so has part: feature:3295084-3295151:1:exon
so has part: feature:3299472-3299521:1:exon
so has part: feature:3300738-3300845:1:exon
so has part: feature:3302232-3302327:1:exon
so has part: feature:3302859-3302960:1:exon
so has part: feature:3304571-3304579:1:exon
so has part: feature:3304688-3304741:1:exon
so has part: feature:3306385-3306494:1:exon

XP_021071403.1
type: Protein
SIO_000068: ncbiprotein

position:3293771:1
position: 3293771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3306494:1
position: 3306494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3293771-3293833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3295084-3295151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3299472-3299521:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3300738-3300845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3302232-3302327:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3302859-3302960:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3304571-3304579:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3304688-3304741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3306385-3306494:1:exon

Nudt5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Nudt5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-sugar pyrophosphatase isoform X1
translation: METQESTGSSPPAKHRVISEEMISEGKWVKFEKTTYMDPTGKTRTWETVKLTTRKGKSADAVSVIPVLQRTLHHECVVLVKQFRPPMGSYCLEFPAGFIEDGESPEAAALRELEEETGYKGEVAECSPAVCMDPGLSNCTTHVVTVTINGDDAGNVRPKPKPGDGEFMEVISLPKNDLLTRLDALGAEQHLTVDAKVYAYGLALKHANSKPFEVPFLKF
SIO_010081: Nudt5
subclass of: SO_0000673
so part of: Nudt5
location: join(3293771..3293833,3295084..3295151,3299472..3299521,3300738..3300845,3302232..3302327,3302859..3302960,3304571..3304579,3304688..3304741,3306385..3306494)
location: region:3293771-3306494:1
so has part: feature:3293771-3293833:1:exon
so has part: feature:3295084-3295151:1:exon
so has part: feature:3299472-3299521:1:exon
so has part: feature:3300738-3300845:1:exon
so has part: feature:3302232-3302327:1:exon
so has part: feature:3302859-3302960:1:exon
so has part: feature:3304571-3304579:1:exon
so has part: feature:3304688-3304741:1:exon
so has part: feature:3306385-3306494:1:exon

XP_029403218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3293771-3293833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3295084-3295151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3299472-3299521:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3300738-3300845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3302232-3302327:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3302859-3302960:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3304571-3304579:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3304688-3304741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3306385-3306494:1:exon

Nudt5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Nudt5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-sugar pyrophosphatase isoform X1
translation: METQESTGSSPPAKHRVISEEMISEGKWVKFEKTTYMDPTGKTRTWETVKLTTRKGKSADAVSVIPVLQRTLHHECVVLVKQFRPPMGSYCLEFPAGFIEDGESPEAAALRELEEETGYKGEVAECSPAVCMDPGLSNCTTHVVTVTINGDDAGNVRPKPKPGDGEFMEVISLPKNDLLTRLDALGAEQHLTVDAKVYAYGLALKHANSKPFEVPFLKF
SIO_010081: Nudt5
subclass of: SO_0000673
so part of: Nudt5
location: join(3293771..3293833,3295084..3295151,3299472..3299521,3300738..3300845,3302232..3302327,3302859..3302960,3304571..3304579,3304688..3304741,3306385..3306494)
location: region:3293771-3306494:1
so has part: feature:3293771-3293833:1:exon
so has part: feature:3295084-3295151:1:exon
so has part: feature:3299472-3299521:1:exon
so has part: feature:3300738-3300845:1:exon
so has part: feature:3302232-3302327:1:exon
so has part: feature:3302859-3302960:1:exon
so has part: feature:3304571-3304579:1:exon
so has part: feature:3304688-3304741:1:exon
so has part: feature:3306385-3306494:1:exon

XP_029403219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3293771-3293833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3295084-3295151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3299472-3299521:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3300738-3300845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3302232-3302327:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3302859-3302960:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3304571-3304579:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3304688-3304741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3306385-3306494:1:exon

Nudt5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Nudt5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-sugar pyrophosphatase isoform X1
translation: METQESTGSSPPAKHRVISEEMISEGKWVKFEKTTYMDPTGKTRTWETVKLTTRKGKSADAVSVIPVLQRTLHHECVVLVKQFRPPMGSYCLEFPAGFIEDGESPEAAALRELEEETGYKGEVAECSPAVCMDPGLSNCTTHVVTVTINGDDAGNVRPKPKPGDGEFMEVISLPKNDLLTRLDALGAEQHLTVDAKVYAYGLALKHANSKPFEVPFLKF
SIO_010081: Nudt5
subclass of: SO_0000673
so part of: Nudt5
location: join(3293771..3293833,3295084..3295151,3299472..3299521,3300738..3300845,3302232..3302327,3302859..3302960,3304571..3304579,3304688..3304741,3306385..3306494)
location: region:3293771-3306494:1
so has part: feature:3293771-3293833:1:exon
so has part: feature:3295084-3295151:1:exon
so has part: feature:3299472-3299521:1:exon
so has part: feature:3300738-3300845:1:exon
so has part: feature:3302232-3302327:1:exon
so has part: feature:3302859-3302960:1:exon
so has part: feature:3304571-3304579:1:exon
so has part: feature:3304688-3304741:1:exon
so has part: feature:3306385-3306494:1:exon

XP_029403220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3293771-3293833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3295084-3295151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3299472-3299521:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3300738-3300845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3302232-3302327:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3302859-3302960:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3304571-3304579:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3304688-3304741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3306385-3306494:1:exon

Nudt5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Nudt5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-sugar pyrophosphatase isoform X2
translation: METQESTGSSPPAKHRVISEEMISEGKWVKFEKTTYMDPTGKTRTWETVKLTTRKGKSADAVSVIPVLQRTLHHECVVLVKQFRPPMGSYCLEFPAGFIEDGESPEAAALRELEEETGYKGEVAECSPAVCMDPGLSNCTTHVVTVTINGDDAGNVRPKPKPEFMEVISLPKNDLLTRLDALGAEQHLTVDAKVYAYGLALKHANSKPFEVPFLKF
SIO_010081: Nudt5
subclass of: SO_0000673
so part of: Nudt5
location: join(3293771..3293833,3295084..3295151,3299472..3299521,3300738..3300845,3302232..3302327,3302859..3302960,3304688..3304741,3306385..3306494)
location: region:3293771-3306494:1
so has part: feature:3293771-3293833:1:exon
so has part: feature:3295084-3295151:1:exon
so has part: feature:3299472-3299521:1:exon
so has part: feature:3300738-3300845:1:exon
so has part: feature:3302232-3302327:1:exon
so has part: feature:3302859-3302960:1:exon
so has part: feature:3304688-3304741:1:exon
so has part: feature:3306385-3306494:1:exon

XP_029403221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3293771-3293833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3295084-3295151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3299472-3299521:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3300738-3300845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3302232-3302327:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3302859-3302960:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3304688-3304741:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3306385-3306494:1:exon

Sec61a2
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Sec61a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3309314..3333967)
location: region:3309314-3333967:-1
so has part: feature:3309314-3333967:-1:exon
subclass of: SO_0000010

110333596
type: Gene
SIO_000068: ncbigene

position:3309314:-1
position: 3309314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3333967:-1
position: 3333967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3309314-3333967:-1:exon

Sec61a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Sec61a2
product: SEC61 translocon alpha 2 subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 27 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021215203.2
SIO_010081: Sec61a2
subclass of: SO_0000673
so part of: Sec61a2
location: complement(join(3309314..3310385,3312054..3312130,3312687..3312878,3314906..3315103,3315386..3315546,3316395..3316548,3321094..3321203,3321330..3321461,3325005..3325083,3330017..3330082,3332038..3332105,3333793..3333967))
location: region:3309314-3333967:-1
so has part: feature:3333793-3333967:-1:exon
so has part: feature:3332038-3332105:-1:exon
so has part: feature:3330017-3330082:-1:exon
so has part: feature:3325005-3325083:-1:exon
so has part: feature:3321330-3321461:-1:exon
so has part: feature:3321094-3321203:-1:exon
so has part: feature:3316395-3316548:-1:exon
so has part: feature:3315386-3315546:-1:exon
so has part: feature:3314906-3315103:-1:exon
so has part: feature:3312687-3312878:-1:exon
so has part: feature:3312054-3312130:-1:exon
so has part: feature:3309314-3310385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3333793-3333967:-1:exon

position:3333793:-1
position: 3333793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3332038-3332105:-1:exon

position:3332038:-1
position: 3332038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3332105:-1
position: 3332105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3330017-3330082:-1:exon

position:3330017:-1
position: 3330017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3330082:-1
position: 3330082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3325005-3325083:-1:exon

position:3325005:-1
position: 3325005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3325083:-1
position: 3325083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3321330-3321461:-1:exon

position:3321330:-1
position: 3321330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3321461:-1
position: 3321461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3321094-3321203:-1:exon

position:3321094:-1
position: 3321094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3321203:-1
position: 3321203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3316395-3316548:-1:exon

position:3316395:-1
position: 3316395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3316548:-1
position: 3316548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3315386-3315546:-1:exon

position:3315386:-1
position: 3315386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3315546:-1
position: 3315546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3314906-3315103:-1:exon

position:3314906:-1
position: 3314906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3315103:-1
position: 3315103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3312687-3312878:-1:exon

position:3312687:-1
position: 3312687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3312878:-1
position: 3312878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3312054-3312130:-1:exon

position:3312054:-1
position: 3312054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3312130:-1
position: 3312130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3309314-3310385:-1:exon

position:3310385:-1
position: 3310385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Sec61a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Sec61a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein transport protein Sec61 subunit alpha
translation: MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEVGGMGALFF
SIO_010081: Sec61a2
subclass of: SO_0000673
so part of: Sec61a2
location: complement(join(3310199..3310385,3312054..3312130,3312687..3312878,3314906..3315103,3315386..3315546,3316395..3316548,3321094..3321203,3321330..3321461,3325005..3325083,3330017..3330082,3332038..3332105,3333793..3333799))
location: region:3310199-3333799:-1
so has part: feature:3333793-3333799:-1:exon
so has part: feature:3332038-3332105:-1:exon
so has part: feature:3330017-3330082:-1:exon
so has part: feature:3325005-3325083:-1:exon
so has part: feature:3321330-3321461:-1:exon
so has part: feature:3321094-3321203:-1:exon
so has part: feature:3316395-3316548:-1:exon
so has part: feature:3315386-3315546:-1:exon
so has part: feature:3314906-3315103:-1:exon
so has part: feature:3312687-3312878:-1:exon
so has part: feature:3312054-3312130:-1:exon
so has part: feature:3310199-3310385:-1:exon

XP_021070862.1
type: Protein
SIO_000068: ncbiprotein

position:3310199:-1
position: 3310199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3333799:-1
position: 3333799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3333793-3333799:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3332038-3332105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3330017-3330082:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3325005-3325083:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3321330-3321461:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3321094-3321203:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3316395-3316548:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3315386-3315546:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3314906-3315103:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3312687-3312878:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3312054-3312130:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3310199-3310385:-1:exon

Dhtkd1
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Dhtkd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3335518..3383397)
location: region:3335518-3383397:-1
so has part: feature:3335518-3383397:-1:exon
subclass of: SO_0000010

110333984
type: Gene
SIO_000068: ncbigene

position:3335518:-1
position: 3335518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3383397:-1
position: 3383397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3335518-3383397:-1:exon

Dhtkd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Dhtkd1
product: dehydrogenase E1 and transketolase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021215798.2
SIO_010081: Dhtkd1
subclass of: SO_0000673
so part of: Dhtkd1
location: complement(join(3335518..3336989,3338173..3338258,3340639..3340808,3341244..3341326,3342477..3342641,3349514..3349620,3350966..3351116,3352568..3352707,3353680..3353764,3355838..3356150,3357637..3357835,3359850..3360021,3361683..3361952,3367279..3367473,3368609..3368820,3370206..3370361,3383126..3383397))
location: region:3335518-3383397:-1
so has part: feature:3383126-3383397:-1:exon
so has part: feature:3370206-3370361:-1:exon
so has part: feature:3368609-3368820:-1:exon
so has part: feature:3367279-3367473:-1:exon
so has part: feature:3361683-3361952:-1:exon
so has part: feature:3359850-3360021:-1:exon
so has part: feature:3357637-3357835:-1:exon
so has part: feature:3355838-3356150:-1:exon
so has part: feature:3353680-3353764:-1:exon
so has part: feature:3352568-3352707:-1:exon
so has part: feature:3350966-3351116:-1:exon
so has part: feature:3349514-3349620:-1:exon
so has part: feature:3342477-3342641:-1:exon
so has part: feature:3341244-3341326:-1:exon
so has part: feature:3340639-3340808:-1:exon
so has part: feature:3338173-3338258:-1:exon
so has part: feature:3335518-3336989:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3383126-3383397:-1:exon

position:3383126:-1
position: 3383126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3370206-3370361:-1:exon

position:3370206:-1
position: 3370206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3370361:-1
position: 3370361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3368609-3368820:-1:exon

position:3368609:-1
position: 3368609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3368820:-1
position: 3368820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3367279-3367473:-1:exon

position:3367279:-1
position: 3367279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3367473:-1
position: 3367473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3361683-3361952:-1:exon

position:3361683:-1
position: 3361683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3361952:-1
position: 3361952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3359850-3360021:-1:exon

position:3359850:-1
position: 3359850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3360021:-1
position: 3360021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3357637-3357835:-1:exon

position:3357637:-1
position: 3357637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3357835:-1
position: 3357835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3355838-3356150:-1:exon

position:3355838:-1
position: 3355838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3356150:-1
position: 3356150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3353680-3353764:-1:exon

position:3353680:-1
position: 3353680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3353764:-1
position: 3353764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3352568-3352707:-1:exon

position:3352568:-1
position: 3352568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3352707:-1
position: 3352707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3350966-3351116:-1:exon

position:3350966:-1
position: 3350966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3351116:-1
position: 3351116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3349514-3349620:-1:exon

position:3349514:-1
position: 3349514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3349620:-1
position: 3349620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3342477-3342641:-1:exon

position:3342477:-1
position: 3342477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3342641:-1
position: 3342641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3341244-3341326:-1:exon

position:3341244:-1
position: 3341244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3341326:-1
position: 3341326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3340639-3340808:-1:exon

position:3340639:-1
position: 3340639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3340808:-1
position: 3340808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3338173-3338258:-1:exon

position:3338173:-1
position: 3338173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3338258:-1
position: 3338258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3335518-3336989:-1:exon

position:3336989:-1
position: 3336989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Dhtkd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Dhtkd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial
translation: MASATVAAAGRALRRAVLLLRRSYQTERGVYGYRPRKAENGEPRGDRARPSVDHGLARLVTVYCEHGHKAAQINPLFPGQALLDTVPEIQALTQTLQGPFTTTGLLNMGKEEASLEEVLAYLNHIYCGPISIETAQLQSQEERDWFARRFEELKKETFTTEERKYLSKLLLESQEFDHFLATKFATVKRYGGEGAESMMGFFHELLKLSAYGGITDIIIGMPHRGRLNLLTGLLQLPPELMFRKMRGLSEFPENVATIGDVLSHLTSSVDLDFGAHRPLHVTMLPNPSHLEAVNPVAVGKTRGRQQSREDGDYAPNGSAQPGDRVICLQVHGDASFCGQGIVLETFTLSNLPHFRIGGSIHLIVNNQLGYTTPAERGRSSLYSSDIGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQFRKDVIVDLLCYRQWGHNELDEPFFTNPVMYKIIRARKSIPDTYAEHLIASGLMTQEEVSDIKASYYTKLNDHLANVAHYSPPATNLQARWQGLVQPEACITTWDTGVPLELLRFIGVKSVEVPEELQVHSHLLKMYVQSRMEKVKNGSSLDWATAETLALGSLLAQGFNVRLSGQDVGRGTFSQRHAMVVCQNTDDAYIPLNHMDPNQKGFLEVSNSPLSEEAVLGFEYGMSIESPKLLPLWEAQFGDFFNGAQIIFDTFISGGEAKWLLQSGLVILLPHGYDGAGPDHSSCRIERFLQMCDSVEEGVDSDTVNMFVVHPTTPAQYFHLLRRQMIRNFRKPLIVASPKMLLRYPAAVSTLEEMAPGTAFKPVIGDSSVDPKKVKTLIFCSGKHFYALLKQRESLGTKKQDFAIIRLEELCPFPLDALQQEMGKYKHVRDVIWSQEEPQNMGPWSFVSPRFEKQLACRLRLVSRPPLPAPAVGIGTVHQQQHEDILSKTFTQ
SIO_010081: Dhtkd1
subclass of: SO_0000673
so part of: Dhtkd1
location: complement(join(3336885..3336989,3338173..3338258,3340639..3340808,3341244..3341326,3342477..3342641,3349514..3349620,3350966..3351116,3352568..3352707,3353680..3353764,3355838..3356150,3357637..3357835,3359850..3360021,3361683..3361952,3367279..3367473,3368609..3368820,3370206..3370361,3383126..3383279))
location: region:3336885-3383279:-1
so has part: feature:3383126-3383279:-1:exon
so has part: feature:3370206-3370361:-1:exon
so has part: feature:3368609-3368820:-1:exon
so has part: feature:3367279-3367473:-1:exon
so has part: feature:3361683-3361952:-1:exon
so has part: feature:3359850-3360021:-1:exon
so has part: feature:3357637-3357835:-1:exon
so has part: feature:3355838-3356150:-1:exon
so has part: feature:3353680-3353764:-1:exon
so has part: feature:3352568-3352707:-1:exon
so has part: feature:3350966-3351116:-1:exon
so has part: feature:3349514-3349620:-1:exon
so has part: feature:3342477-3342641:-1:exon
so has part: feature:3341244-3341326:-1:exon
so has part: feature:3340639-3340808:-1:exon
so has part: feature:3338173-3338258:-1:exon
so has part: feature:3336885-3336989:-1:exon

XP_021071457.1
type: Protein
SIO_000068: ncbiprotein

position:3336885:-1
position: 3336885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3383279:-1
position: 3383279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3383126-3383279:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3370206-3370361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3368609-3368820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3367279-3367473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3361683-3361952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359850-3360021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3357637-3357835:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3355838-3356150:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3353680-3353764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3352568-3352707:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3350966-3351116:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3349514-3349620:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3342477-3342641:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3341244-3341326:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3340639-3340808:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3338173-3338258:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3336885-3336989:-1:exon

Upf2
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Upf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3397432..3502667
location: region:3397432-3502667:1
so has part: feature:3397432-3502667:1:exon
subclass of: SO_0000010

110333635
type: Gene
SIO_000068: ncbigene

position:3397432:1
position: 3397432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3502667:1
position: 3502667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3397432-3502667:1:exon

Upf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Upf2
product: UPF2 regulator of nonsense mediated mRNA decay, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 mRNAs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021215285.1
SIO_010081: Upf2
subclass of: SO_0000673
so part of: Upf2
location: join(3397432..3397516,3403600..3403979,3405179..3405958,3419141..3419301,3421224..3421418,3426260..3426409,3429337..3429440,3435190..3435275,3450011..3450119,3456841..3456954,3464725..3464841,3469475..3469660,3472415..3472618,3473511..3473786,3475652..3475835,3480481..3480620,3486539..3486640,3486890..3486988,3493125..3493292,3496397..3496538,3497521..3497641,3501399..3502667)
location: region:3397432-3502667:1
so has part: feature:3397432-3397516:1:exon
so has part: feature:3403600-3403979:1:exon
so has part: feature:3405179-3405958:1:exon
so has part: feature:3419141-3419301:1:exon
so has part: feature:3421224-3421418:1:exon
so has part: feature:3426260-3426409:1:exon
so has part: feature:3429337-3429440:1:exon
so has part: feature:3435190-3435275:1:exon
so has part: feature:3450011-3450119:1:exon
so has part: feature:3456841-3456954:1:exon
so has part: feature:3464725-3464841:1:exon
so has part: feature:3469475-3469660:1:exon
so has part: feature:3472415-3472618:1:exon
so has part: feature:3473511-3473786:1:exon
so has part: feature:3475652-3475835:1:exon
so has part: feature:3480481-3480620:1:exon
so has part: feature:3486539-3486640:1:exon
so has part: feature:3486890-3486988:1:exon
so has part: feature:3493125-3493292:1:exon
so has part: feature:3496397-3496538:1:exon
so has part: feature:3497521-3497641:1:exon
so has part: feature:3501399-3502667:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3397432-3397516:1:exon

position:3397516:1
position: 3397516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3403600-3403979:1:exon

position:3403600:1
position: 3403600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3403979:1
position: 3403979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3405179-3405958:1:exon

position:3405179:1
position: 3405179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3405958:1
position: 3405958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3419141-3419301:1:exon

position:3419141:1
position: 3419141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3419301:1
position: 3419301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3421224-3421418:1:exon

position:3421224:1
position: 3421224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3421418:1
position: 3421418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3426260-3426409:1:exon

position:3426260:1
position: 3426260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3426409:1
position: 3426409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3429337-3429440:1:exon

position:3429337:1
position: 3429337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3429440:1
position: 3429440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3435190-3435275:1:exon

position:3435190:1
position: 3435190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3435275:1
position: 3435275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3450011-3450119:1:exon

position:3450011:1
position: 3450011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3450119:1
position: 3450119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3456841-3456954:1:exon

position:3456841:1
position: 3456841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3456954:1
position: 3456954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3464725-3464841:1:exon

position:3464725:1
position: 3464725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3464841:1
position: 3464841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3469475-3469660:1:exon

position:3469475:1
position: 3469475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3469660:1
position: 3469660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3472415-3472618:1:exon

position:3472415:1
position: 3472415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3472618:1
position: 3472618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3473511-3473786:1:exon

position:3473511:1
position: 3473511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3473786:1
position: 3473786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3475652-3475835:1:exon

position:3475652:1
position: 3475652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3475835:1
position: 3475835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3480481-3480620:1:exon

position:3480481:1
position: 3480481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3480620:1
position: 3480620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3486539-3486640:1:exon

position:3486539:1
position: 3486539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3486640:1
position: 3486640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3486890-3486988:1:exon

position:3486890:1
position: 3486890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3486988:1
position: 3486988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3493125-3493292:1:exon

position:3493125:1
position: 3493125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3493292:1
position: 3493292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3496397-3496538:1:exon

position:3496397:1
position: 3496397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3496538:1
position: 3496538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3497521-3497641:1:exon

position:3497521:1
position: 3497521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3497641:1
position: 3497641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3501399-3502667:1:exon

position:3501399:1
position: 3501399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Upf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Upf2
product: UPF2 regulator of nonsense mediated mRNA decay, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029547422.1
SIO_010081: Upf2
subclass of: SO_0000673
so part of: Upf2
location: join(3397432..3397516,3403600..3403979,3405179..3405958,3419141..3419301,3421224..3421418,3426260..3426409,3429337..3429440,3435190..3435275,3450011..3450119,3456841..3456954,3464725..3464841,3469475..3469660,3472415..3472618,3473511..3473786,3475652..3475835,3480481..3480620,3486539..3486640,3486890..3486988,3493128..3493292,3496397..3496538,3497521..3497641,3501399..3502667)
location: region:3397432-3502667:1
so has part: feature:3397432-3397516:1:exon
so has part: feature:3403600-3403979:1:exon
so has part: feature:3405179-3405958:1:exon
so has part: feature:3419141-3419301:1:exon
so has part: feature:3421224-3421418:1:exon
so has part: feature:3426260-3426409:1:exon
so has part: feature:3429337-3429440:1:exon
so has part: feature:3435190-3435275:1:exon
so has part: feature:3450011-3450119:1:exon
so has part: feature:3456841-3456954:1:exon
so has part: feature:3464725-3464841:1:exon
so has part: feature:3469475-3469660:1:exon
so has part: feature:3472415-3472618:1:exon
so has part: feature:3473511-3473786:1:exon
so has part: feature:3475652-3475835:1:exon
so has part: feature:3480481-3480620:1:exon
so has part: feature:3486539-3486640:1:exon
so has part: feature:3486890-3486988:1:exon
so has part: feature:3493128-3493292:1:exon
so has part: feature:3496397-3496538:1:exon
so has part: feature:3497521-3497641:1:exon
so has part: feature:3501399-3502667:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3397432-3397516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3403600-3403979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3405179-3405958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3419141-3419301:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3421224-3421418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3426260-3426409:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3429337-3429440:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3435190-3435275:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3450011-3450119:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3456841-3456954:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3464725-3464841:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3469475-3469660:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3472415-3472618:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3473511-3473786:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3475652-3475835:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3480481-3480620:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3486539-3486640:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3486890-3486988:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3493128-3493292:1:exon

position:3493128:1
position: 3493128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3496397-3496538:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3497521-3497641:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3501399-3502667:1:exon

Upf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Upf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 2 isoform X1
translation: MPAERKKSASMEEKDSLLNNKEKDCSERRPVSSKEKPKDDLKITAKKEVSKVPEDKKKKLEEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKQEEEERKKQEEQAKRQQEEAAAQLKEKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLLQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKSIINADRESHTHVSVVISFCRHCGDDIAGLVPRRVKSAAEKFNLNFPPSEIVSPEKQQPFQNLLKEYFTSLTRHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFALSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAILFKDNEKSQNKDSNKDDSKEAKEPKDNKEASSPDDLELELESLEISDDTLELEGADEAEDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVRKKRPPLQEYVRKLLYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKESKDSLTEGENLEEDEEEEEGGAETEEQSGNESEVNEAEEEEGSEEEEEGEEEEEENTDYLTDSNKENETDEENAEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLRKGPPLGGGEGETESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGRRR
SIO_010081: Upf2
subclass of: SO_0000673
so part of: Upf2
location: join(3403618..3403979,3405179..3405958,3419141..3419301,3421224..3421418,3426260..3426409,3429337..3429440,3435190..3435275,3450011..3450119,3456841..3456954,3464725..3464841,3469475..3469660,3472415..3472618,3473511..3473786,3475652..3475835,3480481..3480620,3486539..3486640,3486890..3486988,3493125..3493292,3496397..3496538,3497521..3497641,3501399..3501408)
location: region:3403618-3501408:1
so has part: feature:3403618-3403979:1:exon
so has part: feature:3405179-3405958:1:exon
so has part: feature:3419141-3419301:1:exon
so has part: feature:3421224-3421418:1:exon
so has part: feature:3426260-3426409:1:exon
so has part: feature:3429337-3429440:1:exon
so has part: feature:3435190-3435275:1:exon
so has part: feature:3450011-3450119:1:exon
so has part: feature:3456841-3456954:1:exon
so has part: feature:3464725-3464841:1:exon
so has part: feature:3469475-3469660:1:exon
so has part: feature:3472415-3472618:1:exon
so has part: feature:3473511-3473786:1:exon
so has part: feature:3475652-3475835:1:exon
so has part: feature:3480481-3480620:1:exon
so has part: feature:3486539-3486640:1:exon
so has part: feature:3486890-3486988:1:exon
so has part: feature:3493125-3493292:1:exon
so has part: feature:3496397-3496538:1:exon
so has part: feature:3497521-3497641:1:exon
so has part: feature:3501399-3501408:1:exon

XP_021070944.1
type: Protein
SIO_000068: ncbiprotein

position:3403618:1
position: 3403618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3501408:1
position: 3501408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3403618-3403979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3405179-3405958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3419141-3419301:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3421224-3421418:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3426260-3426409:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3429337-3429440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3435190-3435275:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3450011-3450119:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3456841-3456954:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3464725-3464841:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3469475-3469660:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3472415-3472618:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3473511-3473786:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3475652-3475835:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3480481-3480620:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3486539-3486640:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3486890-3486988:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3493125-3493292:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3496397-3496538:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3497521-3497641:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3501399-3501408:1:exon

Upf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Upf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 2 isoform X2
translation: MPAERKKSASMEEKDSLLNNKEKDCSERRPVSSKEKPKDDLKITAKKEVSKVPEDKKKKLEEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKQEEEERKKQEEQAKRQQEEAAAQLKEKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLLQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKSIINADRESHTHVSVVISFCRHCGDDIAGLVPRRVKSAAEKFNLNFPPSEIVSPEKQQPFQNLLKEYFTSLTRHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFALSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAILFKDNEKSQNKDSNKDDSKEAKEPKDNKEASSPDDLELELESLEISDDTLELEGADEAEDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVRKKRPPLQEYVRKLLYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKESKDSLTEGENLEEDEEEEEGGAETEEQSGNESEVNEAEEEEGSEEEEEGEEEEEENTDYLTDSNKENETDEENAEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQRSGESVKVHQLDVAIPLHLKSQLRKGPPLGGGEGETESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGRRR
SIO_010081: Upf2
subclass of: SO_0000673
so part of: Upf2
location: join(3403618..3403979,3405179..3405958,3419141..3419301,3421224..3421418,3426260..3426409,3429337..3429440,3435190..3435275,3450011..3450119,3456841..3456954,3464725..3464841,3469475..3469660,3472415..3472618,3473511..3473786,3475652..3475835,3480481..3480620,3486539..3486640,3486890..3486988,3493128..3493292,3496397..3496538,3497521..3497641,3501399..3501408)
location: region:3403618-3501408:1
so has part: feature:3403618-3403979:1:exon
so has part: feature:3405179-3405958:1:exon
so has part: feature:3419141-3419301:1:exon
so has part: feature:3421224-3421418:1:exon
so has part: feature:3426260-3426409:1:exon
so has part: feature:3429337-3429440:1:exon
so has part: feature:3435190-3435275:1:exon
so has part: feature:3450011-3450119:1:exon
so has part: feature:3456841-3456954:1:exon
so has part: feature:3464725-3464841:1:exon
so has part: feature:3469475-3469660:1:exon
so has part: feature:3472415-3472618:1:exon
so has part: feature:3473511-3473786:1:exon
so has part: feature:3475652-3475835:1:exon
so has part: feature:3480481-3480620:1:exon
so has part: feature:3486539-3486640:1:exon
so has part: feature:3486890-3486988:1:exon
so has part: feature:3493128-3493292:1:exon
so has part: feature:3496397-3496538:1:exon
so has part: feature:3497521-3497641:1:exon
so has part: feature:3501399-3501408:1:exon

XP_029403282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3403618-3403979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3405179-3405958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3419141-3419301:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3421224-3421418:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3426260-3426409:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3429337-3429440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3435190-3435275:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3450011-3450119:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3456841-3456954:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3464725-3464841:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3469475-3469660:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3472415-3472618:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3473511-3473786:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3475652-3475835:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3480481-3480620:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3486539-3486640:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3486890-3486988:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3493128-3493292:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3496397-3496538:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3497521-3497641:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3501399-3501408:1:exon

Proser2
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Proser2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3536302..3565220)
location: region:3536302-3565220:-1
so has part: feature:3536302-3565220:-1:exon
subclass of: SO_0000010

110334149
type: Gene
SIO_000068: ncbigene

position:3536302:-1
position: 3536302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3565220:-1
position: 3565220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3536302-3565220:-1:exon

Proser2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Proser2
product: proline and serine rich 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021216008.2
SIO_010081: Proser2
subclass of: SO_0000673
so part of: Proser2
location: complement(join(3536302..3539337,3540937..3541189,3548569..3548789,3565117..3565220))
location: region:3536302-3565220:-1
so has part: feature:3565117-3565220:-1:exon
so has part: feature:3548569-3548789:-1:exon
so has part: feature:3540937-3541189:-1:exon
so has part: feature:3536302-3539337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3565117-3565220:-1:exon

position:3565117:-1
position: 3565117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3548569-3548789:-1:exon

position:3548569:-1
position: 3548569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3548789:-1
position: 3548789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3540937-3541189:-1:exon

position:3540937:-1
position: 3540937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3541189:-1
position: 3541189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3536302-3539337:-1:exon

position:3539337:-1
position: 3539337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Proser2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Proser2
product: proline and serine rich 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029547636.1
SIO_010081: Proser2
subclass of: SO_0000673
so part of: Proser2
location: complement(join(3536302..3539337,3540937..3541189,3548569..3548789,3564971..3565104))
location: region:3536302-3565104:-1
so has part: feature:3564971-3565104:-1:exon
so has part: feature:3548569-3548789:-1:exon
so has part: feature:3540937-3541189:-1:exon
so has part: feature:3536302-3539337:-1:exon

position:3565104:-1
position: 3565104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3564971-3565104:-1:exon

position:3564971:-1
position: 3564971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3548569-3548789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3540937-3541189:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3536302-3539337:-1:exon

Proser2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Proser2
product: proline and serine rich 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029547633.1
SIO_010081: Proser2
subclass of: SO_0000673
so part of: Proser2
location: complement(join(3536302..3539337,3540937..3541189,3548569..3548789,3564678..3564945))
location: region:3536302-3564945:-1
so has part: feature:3564678-3564945:-1:exon
so has part: feature:3548569-3548789:-1:exon
so has part: feature:3540937-3541189:-1:exon
so has part: feature:3536302-3539337:-1:exon

position:3564945:-1
position: 3564945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3564678-3564945:-1:exon

position:3564678:-1
position: 3564678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3548569-3548789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3540937-3541189:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3536302-3539337:-1:exon

Proser2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Proser2
product: proline and serine rich 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029547634.1
SIO_010081: Proser2
subclass of: SO_0000673
so part of: Proser2
location: complement(join(3536302..3539337,3540937..3541189,3548569..3548789,3563333..3563564))
location: region:3536302-3563564:-1
so has part: feature:3563333-3563564:-1:exon
so has part: feature:3548569-3548789:-1:exon
so has part: feature:3540937-3541189:-1:exon
so has part: feature:3536302-3539337:-1:exon

position:3563564:-1
position: 3563564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3563333-3563564:-1:exon

position:3563333:-1
position: 3563333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3548569-3548789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3540937-3541189:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3536302-3539337:-1:exon

Proser2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Proser2
product: proline and serine rich 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029547635.1
SIO_010081: Proser2
subclass of: SO_0000673
so part of: Proser2
location: complement(join(3536302..3539337,3540937..3541189,3548569..3548789,3550330..3551068))
location: region:3536302-3551068:-1
so has part: feature:3550330-3551068:-1:exon
so has part: feature:3548569-3548789:-1:exon
so has part: feature:3540937-3541189:-1:exon
so has part: feature:3536302-3539337:-1:exon

position:3551068:-1
position: 3551068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3550330-3551068:-1:exon

position:3550330:-1
position: 3550330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3548569-3548789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3540937-3541189:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3536302-3539337:-1:exon

Proser2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Proser2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline and serine-rich protein 2
translation: MPGNQQKPESLEMDSDTSPSCGLSDLSRGGSLESRCSSSRSRSFTMDDESLKHLTHEEKDVILFFEETLDSLEYDFDEPALCDSGIHCHSPQSLEESPSSHSEPEDVIDLVQPAPASGEAESLPDVPQVTGAPSDTKQGTPFLEGGKQVAESSLPPPDSRGPEVFPLPPSLPVPAPSAPRKELMSPSPPAEHPKLLRSVPTPLVIAQKISEKLAGNEALFPTSPSKEGRPGEWRTPTSPASRNGDHVGVWHRHMTQPAPKVHRFPSNISVTNSAGKDFNKTISKAAVNVQERKAQVLANINGMSFIAAGDTSSEERWQKAEEQRSGSADGARTLGRAGMAGEPGTLRAGVPTRAQQSRAVQTEQPPALANGFQSVHEALRSEPSSFVPTSKTITFRPDPAVTSKLARQNASRSLYEPRPDGSQDARKRTGSLPRAVGFRPQGITVQFSGRGSTEEARREALRKLGLLKENL
SIO_010081: Proser2
subclass of: SO_0000673
so part of: Proser2
location: complement(join(3538313..3539337,3540937..3541189,3548569..3548706))
location: region:3538313-3548706:-1
so has part: feature:3548569-3548706:-1:exon
so has part: feature:3540937-3541189:-1:exon
so has part: feature:3538313-3539337:-1:exon

XP_021071667.1
type: Protein
SIO_000068: ncbiprotein

position:3538313:-1
position: 3538313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3548706:-1
position: 3548706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3548569-3548706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3540937-3541189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3538313-3539337:-1:exon

Proser2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Proser2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline and serine-rich protein 2
translation: MPGNQQKPESLEMDSDTSPSCGLSDLSRGGSLESRCSSSRSRSFTMDDESLKHLTHEEKDVILFFEETLDSLEYDFDEPALCDSGIHCHSPQSLEESPSSHSEPEDVIDLVQPAPASGEAESLPDVPQVTGAPSDTKQGTPFLEGGKQVAESSLPPPDSRGPEVFPLPPSLPVPAPSAPRKELMSPSPPAEHPKLLRSVPTPLVIAQKISEKLAGNEALFPTSPSKEGRPGEWRTPTSPASRNGDHVGVWHRHMTQPAPKVHRFPSNISVTNSAGKDFNKTISKAAVNVQERKAQVLANINGMSFIAAGDTSSEERWQKAEEQRSGSADGARTLGRAGMAGEPGTLRAGVPTRAQQSRAVQTEQPPALANGFQSVHEALRSEPSSFVPTSKTITFRPDPAVTSKLARQNASRSLYEPRPDGSQDARKRTGSLPRAVGFRPQGITVQFSGRGSTEEARREALRKLGLLKENL
SIO_010081: Proser2
subclass of: SO_0000673
so part of: Proser2
location: complement(join(3538313..3539337,3540937..3541189,3548569..3548706))
location: region:3538313-3548706:-1
so has part: feature:3548569-3548706:-1:exon
so has part: feature:3540937-3541189:-1:exon
so has part: feature:3538313-3539337:-1:exon

XP_029403493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3548569-3548706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3540937-3541189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3538313-3539337:-1:exon

Proser2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Proser2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline and serine-rich protein 2
translation: MPGNQQKPESLEMDSDTSPSCGLSDLSRGGSLESRCSSSRSRSFTMDDESLKHLTHEEKDVILFFEETLDSLEYDFDEPALCDSGIHCHSPQSLEESPSSHSEPEDVIDLVQPAPASGEAESLPDVPQVTGAPSDTKQGTPFLEGGKQVAESSLPPPDSRGPEVFPLPPSLPVPAPSAPRKELMSPSPPAEHPKLLRSVPTPLVIAQKISEKLAGNEALFPTSPSKEGRPGEWRTPTSPASRNGDHVGVWHRHMTQPAPKVHRFPSNISVTNSAGKDFNKTISKAAVNVQERKAQVLANINGMSFIAAGDTSSEERWQKAEEQRSGSADGARTLGRAGMAGEPGTLRAGVPTRAQQSRAVQTEQPPALANGFQSVHEALRSEPSSFVPTSKTITFRPDPAVTSKLARQNASRSLYEPRPDGSQDARKRTGSLPRAVGFRPQGITVQFSGRGSTEEARREALRKLGLLKENL
SIO_010081: Proser2
subclass of: SO_0000673
so part of: Proser2
location: complement(join(3538313..3539337,3540937..3541189,3548569..3548706))
location: region:3538313-3548706:-1
so has part: feature:3548569-3548706:-1:exon
so has part: feature:3540937-3541189:-1:exon
so has part: feature:3538313-3539337:-1:exon

XP_029403494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3548569-3548706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3540937-3541189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3538313-3539337:-1:exon

Proser2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Proser2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline and serine-rich protein 2
translation: MPGNQQKPESLEMDSDTSPSCGLSDLSRGGSLESRCSSSRSRSFTMDDESLKHLTHEEKDVILFFEETLDSLEYDFDEPALCDSGIHCHSPQSLEESPSSHSEPEDVIDLVQPAPASGEAESLPDVPQVTGAPSDTKQGTPFLEGGKQVAESSLPPPDSRGPEVFPLPPSLPVPAPSAPRKELMSPSPPAEHPKLLRSVPTPLVIAQKISEKLAGNEALFPTSPSKEGRPGEWRTPTSPASRNGDHVGVWHRHMTQPAPKVHRFPSNISVTNSAGKDFNKTISKAAVNVQERKAQVLANINGMSFIAAGDTSSEERWQKAEEQRSGSADGARTLGRAGMAGEPGTLRAGVPTRAQQSRAVQTEQPPALANGFQSVHEALRSEPSSFVPTSKTITFRPDPAVTSKLARQNASRSLYEPRPDGSQDARKRTGSLPRAVGFRPQGITVQFSGRGSTEEARREALRKLGLLKENL
SIO_010081: Proser2
subclass of: SO_0000673
so part of: Proser2
location: complement(join(3538313..3539337,3540937..3541189,3548569..3548706))
location: region:3538313-3548706:-1
so has part: feature:3548569-3548706:-1:exon
so has part: feature:3540937-3541189:-1:exon
so has part: feature:3538313-3539337:-1:exon

XP_029403495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3548569-3548706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3540937-3541189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3538313-3539337:-1:exon

Proser2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Proser2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline and serine-rich protein 2
translation: MPGNQQKPESLEMDSDTSPSCGLSDLSRGGSLESRCSSSRSRSFTMDDESLKHLTHEEKDVILFFEETLDSLEYDFDEPALCDSGIHCHSPQSLEESPSSHSEPEDVIDLVQPAPASGEAESLPDVPQVTGAPSDTKQGTPFLEGGKQVAESSLPPPDSRGPEVFPLPPSLPVPAPSAPRKELMSPSPPAEHPKLLRSVPTPLVIAQKISEKLAGNEALFPTSPSKEGRPGEWRTPTSPASRNGDHVGVWHRHMTQPAPKVHRFPSNISVTNSAGKDFNKTISKAAVNVQERKAQVLANINGMSFIAAGDTSSEERWQKAEEQRSGSADGARTLGRAGMAGEPGTLRAGVPTRAQQSRAVQTEQPPALANGFQSVHEALRSEPSSFVPTSKTITFRPDPAVTSKLARQNASRSLYEPRPDGSQDARKRTGSLPRAVGFRPQGITVQFSGRGSTEEARREALRKLGLLKENL
SIO_010081: Proser2
subclass of: SO_0000673
so part of: Proser2
location: complement(join(3538313..3539337,3540937..3541189,3548569..3548706))
location: region:3538313-3548706:-1
so has part: feature:3548569-3548706:-1:exon
so has part: feature:3540937-3541189:-1:exon
so has part: feature:3538313-3539337:-1:exon

XP_029403496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3548569-3548706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3540937-3541189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3538313-3539337:-1:exon

LOC110334236
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110334236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3590410..3591578
location: region:3590410-3591578:1
so has part: feature:3590410-3591578:1:exon

110334236
type: Gene
SIO_000068: ncbigene

position:3590410:1
position: 3590410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3591578:1
position: 3591578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3590410-3591578:1:exon

LOC110334236
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110334236
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110334236
subclass of: SO_0000673
so part of: LOC110334236
location: 3590410..3590617
location: region:3590410-3590617:1
so has part: feature:3590410-3590617:1:exon

position:3590617:1
position: 3590617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3590410-3590617:1:exon

Echdc3
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Echdc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3623176..3644814)
location: region:3623176-3644814:-1
so has part: feature:3623176-3644814:-1:exon
subclass of: SO_0000010

110334145
type: Gene
SIO_000068: ncbigene

position:3623176:-1
position: 3623176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3644814:-1
position: 3644814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3623176-3644814:-1:exon

Echdc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Echdc3
product: enoyl-CoA hydratase domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021216005.1
SIO_010081: Echdc3
subclass of: SO_0000673
so part of: Echdc3
location: complement(join(3623176..3624008,3630085..3630285,3637866..3637963,3640023..3640144,3644589..3644814))
location: region:3623176-3644814:-1
so has part: feature:3644589-3644814:-1:exon
so has part: feature:3640023-3640144:-1:exon
so has part: feature:3637866-3637963:-1:exon
so has part: feature:3630085-3630285:-1:exon
so has part: feature:3623176-3624008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3644589-3644814:-1:exon

position:3644589:-1
position: 3644589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3640023-3640144:-1:exon

position:3640023:-1
position: 3640023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3640144:-1
position: 3640144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3637866-3637963:-1:exon

position:3637866:-1
position: 3637866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3637963:-1
position: 3637963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3630085-3630285:-1:exon

position:3630085:-1
position: 3630085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3630285:-1
position: 3630285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3623176-3624008:-1:exon

position:3624008:-1
position: 3624008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Echdc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Echdc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enoyl-CoA hydratase domain-containing protein 3, mitochondrial
translation: MAMVAGLRAFGAKRPSWLRRNPWAPLSAGFCSPGSAGPAGSESEPRLTSRRQQDGIRNIVLSNPRRRNALSLAMLKSLRSDILHEAESEDLKVIIISAEGPVFSSGHDLKELTDAQGRDYHTEVFQTCSEVMMLIRNHPVPILAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPAVALGRAVPRKVALEMLFTGEPISAQEALRHGLISKVVPEEQLEAETMRIAKKIASLSRSVVALGKATFYKQLPQDLRTAYFLASQAMVDNLALQDGQEGIEAFIQKRKPIWSH
SIO_010081: Echdc3
subclass of: SO_0000673
so part of: Echdc3
location: complement(join(3623697..3624008,3630085..3630285,3637866..3637963,3640023..3640144,3644589..3644758))
location: region:3623697-3644758:-1
so has part: feature:3644589-3644758:-1:exon
so has part: feature:3640023-3640144:-1:exon
so has part: feature:3637866-3637963:-1:exon
so has part: feature:3630085-3630285:-1:exon
so has part: feature:3623697-3624008:-1:exon

XP_021071664.1
type: Protein
SIO_000068: ncbiprotein

position:3623697:-1
position: 3623697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3644758:-1
position: 3644758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3644589-3644758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3640023-3640144:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3637866-3637963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3630085-3630285:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3623697-3624008:-1:exon

LOC110334280
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110334280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3654868..3655143
location: region:3654868-3655143:1
so has part: feature:3654868-3655143:1:exon

110334280
type: Gene
SIO_000068: ncbigene

position:3654868:1
position: 3654868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3655143:1
position: 3655143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3654868-3655143:1:exon

LOC110334280
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110334280
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC110334280
subclass of: SO_0000673
so part of: LOC110334280
location: 3654868..3655143
location: region:3654868-3655143:1
so has part: feature:3654868-3655143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3654868-3655143:1:exon

Usp6nl
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Usp6nl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3752966..3876301
location: region:3752966-3876301:1
so has part: feature:3752966-3876301:1:exon
subclass of: SO_0000010

110333658
type: Gene
SIO_000068: ncbigene

position:3752966:1
position: 3752966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3876301:1
position: 3876301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3752966-3876301:1:exon

Usp6nl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Usp6nl
product: USP6 N-terminal like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021215332.1
SIO_010081: Usp6nl
subclass of: SO_0000673
so part of: Usp6nl
location: join(3752966..3753193,3768099..3768190,3819362..3819429,3822789..3822871,3828782..3828821,3837888..3837968,3843980..3844087,3850825..3850934,3853110..3853158,3855165..3855285,3858798..3858892,3859428..3859493,3859582..3859681,3862191..3862343,3872829..3876301)
location: region:3752966-3876301:1
so has part: feature:3752966-3753193:1:exon
so has part: feature:3768099-3768190:1:exon
so has part: feature:3819362-3819429:1:exon
so has part: feature:3822789-3822871:1:exon
so has part: feature:3828782-3828821:1:exon
so has part: feature:3837888-3837968:1:exon
so has part: feature:3843980-3844087:1:exon
so has part: feature:3850825-3850934:1:exon
so has part: feature:3853110-3853158:1:exon
so has part: feature:3855165-3855285:1:exon
so has part: feature:3858798-3858892:1:exon
so has part: feature:3859428-3859493:1:exon
so has part: feature:3859582-3859681:1:exon
so has part: feature:3862191-3862343:1:exon
so has part: feature:3872829-3876301:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3752966-3753193:1:exon

position:3753193:1
position: 3753193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3768099-3768190:1:exon

position:3768099:1
position: 3768099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3768190:1
position: 3768190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3819362-3819429:1:exon

position:3819362:1
position: 3819362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3819429:1
position: 3819429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3822789-3822871:1:exon

position:3822789:1
position: 3822789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3822871:1
position: 3822871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3828782-3828821:1:exon

position:3828782:1
position: 3828782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3828821:1
position: 3828821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3837888-3837968:1:exon

position:3837888:1
position: 3837888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3837968:1
position: 3837968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3843980-3844087:1:exon

position:3843980:1
position: 3843980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3844087:1
position: 3844087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3850825-3850934:1:exon

position:3850825:1
position: 3850825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3850934:1
position: 3850934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3853110-3853158:1:exon

position:3853110:1
position: 3853110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3853158:1
position: 3853158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3855165-3855285:1:exon

position:3855165:1
position: 3855165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3855285:1
position: 3855285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3858798-3858892:1:exon

position:3858798:1
position: 3858798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3858892:1
position: 3858892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3859428-3859493:1:exon

position:3859428:1
position: 3859428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3859493:1
position: 3859493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3859582-3859681:1:exon

position:3859582:1
position: 3859582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3859681:1
position: 3859681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3862191-3862343:1:exon

position:3862191:1
position: 3862191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3862343:1
position: 3862343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3872829-3876301:1:exon

position:3872829:1
position: 3872829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Usp6nl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Usp6nl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: USP6 N-terminal-like protein isoform X1
translation: MNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPYHNAAADRQKQLEIERTSKWLKMLKKWERYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTDVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVHGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFRLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFVIEQLQVSMAELKRAKLDLPEPGKEDEYPKKPLGQLPPESACINHLSNGQRSVGRPSPKTSSRREDGSPHKNYEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEADSQRKPSPGMQDSSRHYNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTAKYAIEGKSHSALPVTIPGSAETRLSNSRQKMKALDGGEGKRGSNASQYDNVPGGENEHGASAEEGPERTHPHSPRKHPEPSPSPPKVPNKFTFKVQPPSHVRYPSQLQEEDHRAAYPPSYSNPPIYHGNSPKHVPAAHSGFVSTQTSPRPQINPSKRPYGSSLSVDTSPEKAYSRPAPVVLPSSRIEVLPIDIGARGYGSSGSPKNGKFILPPVDYLPENRKWSEVSYTYRPEMHGPSWTQDANRSHLSNLPNYAAFQHIPFQAHGLPEVSVDSPVRYKMSPAVEDASPHGYPYAGPSPSAHHYRNREGLSVQESVLL
SIO_010081: Usp6nl
subclass of: SO_0000673
so part of: Usp6nl
location: join(3768187..3768190,3819362..3819429,3822789..3822871,3828782..3828821,3837888..3837968,3843980..3844087,3850825..3850934,3853110..3853158,3855165..3855285,3858798..3858892,3859428..3859493,3859582..3859681,3862191..3862343,3872829..3874201)
location: region:3768187-3874201:1
so has part: feature:3768187-3768190:1:exon
so has part: feature:3819362-3819429:1:exon
so has part: feature:3822789-3822871:1:exon
so has part: feature:3828782-3828821:1:exon
so has part: feature:3837888-3837968:1:exon
so has part: feature:3843980-3844087:1:exon
so has part: feature:3850825-3850934:1:exon
so has part: feature:3853110-3853158:1:exon
so has part: feature:3855165-3855285:1:exon
so has part: feature:3858798-3858892:1:exon
so has part: feature:3859428-3859493:1:exon
so has part: feature:3859582-3859681:1:exon
so has part: feature:3862191-3862343:1:exon
so has part: feature:3872829-3874201:1:exon

XP_021070991.1
type: Protein
SIO_000068: ncbiprotein

position:3768187:1
position: 3768187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3874201:1
position: 3874201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3768187-3768190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3819362-3819429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3822789-3822871:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3828782-3828821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3837888-3837968:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3843980-3844087:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3850825-3850934:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3853110-3853158:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3855165-3855285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3858798-3858892:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3859428-3859493:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3859582-3859681:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3862191-3862343:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3872829-3874201:1:exon

Usp6nl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Usp6nl
product: USP6 N-terminal like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029547427.1
SIO_010081: Usp6nl
subclass of: SO_0000673
so part of: Usp6nl
location: join(3822789..3822871,3837888..3837968,3843980..3844087,3850825..3850934,3853110..3853158,3855165..3855285,3858798..3858892,3859428..3859493,3859582..3859681,3862191..3862343,3872829..3876301)
location: region:3822789-3876301:1
so has part: feature:3822789-3822871:1:exon
so has part: feature:3837888-3837968:1:exon
so has part: feature:3843980-3844087:1:exon
so has part: feature:3850825-3850934:1:exon
so has part: feature:3853110-3853158:1:exon
so has part: feature:3855165-3855285:1:exon
so has part: feature:3858798-3858892:1:exon
so has part: feature:3859428-3859493:1:exon
so has part: feature:3859582-3859681:1:exon
so has part: feature:3862191-3862343:1:exon
so has part: feature:3872829-3876301:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3822789-3822871:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3837888-3837968:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3843980-3844087:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3850825-3850934:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3853110-3853158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3855165-3855285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3858798-3858892:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3859428-3859493:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3859582-3859681:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3862191-3862343:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3872829-3876301:1:exon

Usp6nl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Usp6nl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: USP6 N-terminal-like protein isoform X2
translation: MLKKWERYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTDVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVHGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFRLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFVIEQLQVSMAELKRAKLDLPEPGKEDEYPKKPLGQLPPESACINHLSNGQRSVGRPSPKTSSRREDGSPHKNYEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEADSQRKPSPGMQDSSRHYNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTAKYAIEGKSHSALPVTIPGSAETRLSNSRQKMKALDGGEGKRGSNASQYDNVPGGENEHGASAEEGPERTHPHSPRKHPEPSPSPPKVPNKFTFKVQPPSHVRYPSQLQEEDHRAAYPPSYSNPPIYHGNSPKHVPAAHSGFVSTQTSPRPQINPSKRPYGSSLSVDTSPEKAYSRPAPVVLPSSRIEVLPIDIGARGYGSSGSPKNGKFILPPVDYLPENRKWSEVSYTYRPEMHGPSWTQDANRSHLSNLPNYAAFQHIPFQAHGLPEVSVDSPVRYKMSPAVEDASPHGYPYAGPSPSAHHYRNREGLSVQESVLL
SIO_010081: Usp6nl
subclass of: SO_0000673
so part of: Usp6nl
location: join(3837930..3837968,3843980..3844087,3850825..3850934,3853110..3853158,3855165..3855285,3858798..3858892,3859428..3859493,3859582..3859681,3862191..3862343,3872829..3874201)
location: region:3837930-3874201:1
so has part: feature:3837930-3837968:1:exon
so has part: feature:3843980-3844087:1:exon
so has part: feature:3850825-3850934:1:exon
so has part: feature:3853110-3853158:1:exon
so has part: feature:3855165-3855285:1:exon
so has part: feature:3858798-3858892:1:exon
so has part: feature:3859428-3859493:1:exon
so has part: feature:3859582-3859681:1:exon
so has part: feature:3862191-3862343:1:exon
so has part: feature:3872829-3874201:1:exon

XP_029403287.1
type: Protein
SIO_000068: ncbiprotein

position:3837930:1
position: 3837930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3837930-3837968:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3843980-3844087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3850825-3850934:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3853110-3853158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3855165-3855285:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3858798-3858892:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3859428-3859493:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3859582-3859681:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3862191-3862343:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3872829-3874201:1:exon

Celf2
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3960036..4802604)
location: region:3960036-4802604:-1
so has part: feature:3960036-4802604:-1:exon
subclass of: SO_0000010

110333628
type: Gene
SIO_000068: ncbigene

position:3960036:-1
position: 3960036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4802604:-1
position: 4802604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3960036-4802604:-1:exon

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029547668.1
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3969946..3970089,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4370941..4370976,4590614..4590652,4802224..4802288,4802503..4802604))
location: region:3960036-4802604:-1
so has part: feature:4802503-4802604:-1:exon
so has part: feature:4802224-4802288:-1:exon
so has part: feature:4590614-4590652:-1:exon
so has part: feature:4370941-4370976:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967144-3967315:-1:exon
so has part: feature:3960036-3965772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4802503-4802604:-1:exon

position:4802503:-1
position: 4802503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4802224-4802288:-1:exon

position:4802224:-1
position: 4802224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4802288:-1
position: 4802288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4590614-4590652:-1:exon

position:4590614:-1
position: 4590614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4590652:-1
position: 4590652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4370941-4370976:-1:exon

position:4370941:-1
position: 4370941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4370976:-1
position: 4370976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4138979-4139175:-1:exon

position:4138979:-1
position: 4138979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4139175:-1
position: 4139175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4080749-4080831:-1:exon

position:4080749:-1
position: 4080749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4080831:-1
position: 4080831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4045924-4045972:-1:exon

position:4045924:-1
position: 4045924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4045972:-1
position: 4045972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4036537-4036671:-1:exon

position:4036537:-1
position: 4036537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4036671:-1
position: 4036671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4028702-4028781:-1:exon

position:4028702:-1
position: 4028702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4028781:-1
position: 4028781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4024845-4025003:-1:exon

position:4024845:-1
position: 4024845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4025003:-1
position: 4025003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4021086-4021149:-1:exon

position:4021086:-1
position: 4021086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4021149:-1
position: 4021149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4009296-4009430:-1:exon

position:4009296:-1
position: 4009296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4009430:-1
position: 4009430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3980466-3980597:-1:exon

position:3980466:-1
position: 3980466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3980597:-1
position: 3980597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3973917-3974114:-1:exon

position:3973917:-1
position: 3973917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3974114:-1
position: 3974114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3969946-3970089:-1:exon

position:3969946:-1
position: 3969946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3970089:-1
position: 3970089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3967144-3967315:-1:exon

position:3967144:-1
position: 3967144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3967315:-1
position: 3967315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3960036-3965772:-1:exon

position:3965772:-1
position: 3965772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021215268.2
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3969946..3970089,3973917..3974096,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4370941..4370976,4590614..4590652,4802224..4802371))
location: region:3960036-4802371:-1
so has part: feature:4802224-4802371:-1:exon
so has part: feature:4590614-4590652:-1:exon
so has part: feature:4370941-4370976:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980478-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967144-3967315:-1:exon
so has part: feature:3960036-3965772:-1:exon

position:4802371:-1
position: 4802371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4802224-4802371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4590614-4590652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4370941-4370976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3980478-3980597:-1:exon

position:3980478:-1
position: 3980478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3973917-3974096:-1:exon

position:3974096:-1
position: 3974096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3967144-3967315:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3960036-3965772:-1:exon

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021215269.2
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3973917..3974096,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4370941..4370976,4487569..4488188))
location: region:3960036-4488188:-1
so has part: feature:4487569-4488188:-1:exon
so has part: feature:4370941-4370976:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980478-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3967144-3967315:-1:exon
so has part: feature:3960036-3965772:-1:exon

position:4488188:-1
position: 4488188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4487569-4488188:-1:exon

position:4487569:-1
position: 4487569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4370941-4370976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3980478-3980597:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3973917-3974096:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3967144-3967315:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3960036-3965772:-1:exon

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029547661.1
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3969946..3970089,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4370941..4370976,4487569..4487762))
location: region:3960036-4487762:-1
so has part: feature:4487569-4487762:-1:exon
so has part: feature:4370941-4370976:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967144-3967315:-1:exon
so has part: feature:3960036-3965772:-1:exon

position:4487762:-1
position: 4487762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4487569-4487762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4370941-4370976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3967144-3967315:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3960036-3965772:-1:exon

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 mRNAs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021215260.2
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3969946..3970089,3973917..3974096,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4370941..4370976,4487569..4487757))
location: region:3960036-4487757:-1
so has part: feature:4487569-4487757:-1:exon
so has part: feature:4370941-4370976:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967144-3967315:-1:exon
so has part: feature:3960036-3965772:-1:exon

position:4487757:-1
position: 4487757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4487569-4487757:-1:exon

urn:…
SIO_000300: 2
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Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021215261.2
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3969946..3970089,3973917..3974096,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4370941..4370976,4487569..4487752))
location: region:3960036-4487752:-1
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position:4487752:-1
position: 4487752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029547663.1
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3969946..3970089,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4370941..4370976,4380857..4380875))
location: region:3960036-4380875:-1
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position:4380875:-1
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Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029547673.1
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3973917..3974096,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4290878..4291227))
location: region:3960036-4291227:-1
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position:4291227:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
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position:4290878:-1
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urn:…
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Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 mRNAs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021215262.2
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3969946..3970089,3973917..3974114,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4290878..4291226))
location: region:3960036-4291226:-1
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position:4291226:-1
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urn:…
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Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029547660.1
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
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Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021215264.2
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
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urn:…
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Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021215263.2
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
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SIO_000300: 10
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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:3967144-3967315:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3960036-3965772:-1:exon

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029547669.1
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3969946..3970089,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4290390..4290695))
location: region:3960036-4290695:-1
so has part: feature:4290390-4290695:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967144-3967315:-1:exon
so has part: feature:3960036-3965772:-1:exon

position:4290695:-1
position: 4290695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4290390-4290695:-1:exon

position:4290390:-1
position: 4290390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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SIO_000300: 3
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SIO_000300: 12
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3967144-3967315:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3960036-3965772:-1:exon

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029547665.1
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3969946..3970089,3973917..3974096,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4277961..4278069))
location: region:3960036-4278069:-1
so has part: feature:4277961-4278069:-1:exon
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so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
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so has part: feature:4009296-4009430:-1:exon
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so has part: feature:3973917-3974096:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967144-3967315:-1:exon
so has part: feature:3960036-3965772:-1:exon

position:4278069:-1
position: 4278069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4277961-4278069:-1:exon

position:4277961:-1
position: 4277961
reference: sequence
type: ReverseStrandPosition
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urn:…
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SIO_000300: 13
SIO_000628: feature:3967144-3967315:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3960036-3965772:-1:exon

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029547664.1
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3969946..3970089,3973917..3974114,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4277961..4278069))
location: region:3960036-4278069:-1
so has part: feature:4277961-4278069:-1:exon
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so has part: feature:4036537-4036671:-1:exon
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so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967144-3967315:-1:exon
so has part: feature:3960036-3965772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4277961-4278069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4080749-4080831:-1:exon

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SIO_000300: 11
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SIO_000300: 12
SIO_000628: feature:3969946-3970089:-1:exon

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SIO_000300: 13
SIO_000628: feature:3967144-3967315:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3960036-3965772:-1:exon

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029547662.1
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3969946..3970089,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4277961..4278069))
location: region:3960036-4278069:-1
so has part: feature:4277961-4278069:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
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so has part: feature:3960036-3965772:-1:exon

urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4080749-4080831:-1:exon

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SIO_000300: 5
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SIO_000628: feature:3980466-3980597:-1:exon

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SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:3967144-3967315:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3960036-3965772:-1:exon

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029547670.1
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3969946..3970089,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4277460..4277638))
location: region:3960036-4277638:-1
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so has part: feature:3960036-3965772:-1:exon

position:4277638:-1
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type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4277460-4277638:-1:exon

position:4277460:-1
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urn:…
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SIO_000300: 13
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urn:…
SIO_000300: 14
SIO_000628: feature:3960036-3965772:-1:exon

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021215267.2
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3969946..3970089,3973917..3974096,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4139341..4139770))
location: region:3960036-4139770:-1
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so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967144-3967315:-1:exon
so has part: feature:3960036-3965772:-1:exon

position:4139770:-1
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urn:…
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urn:…
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urn:…
SIO_000300: 14
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Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029547672.1
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3967315,3969946..3970089,3973917..3974114,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4139341..4139770))
location: region:3960036-4139770:-1
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urn:…
SIO_000300: 1
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urn:…
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urn:…
SIO_000300: 13
SIO_000628: feature:3960036-3967315:-1:exon

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021215266.2
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3969946..3970089,3973917..3974096,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4139341..4139376))
location: region:3960036-4139376:-1
so has part: feature:4139341-4139376:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967144-3967315:-1:exon
so has part: feature:3960036-3965772:-1:exon

position:4139376:-1
position: 4139376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4139341-4139376:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3973917-3974096:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3967144-3967315:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3960036-3965772:-1:exon

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029547671.1
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3969946..3970089,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4139341..4139355))
location: region:3960036-4139355:-1
so has part: feature:4139341-4139355:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967144-3967315:-1:exon
so has part: feature:3960036-3965772:-1:exon

position:4139355:-1
position: 4139355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4139341-4139355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3967144-3967315:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3960036-3965772:-1:exon

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029547667.1
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3973917..3974096,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175))
location: region:3960036-4139175:-1
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3967144-3967315:-1:exon
so has part: feature:3960036-3965772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3973917-3974096:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3967144-3967315:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3960036-3965772:-1:exon

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029547666.1
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175))
location: region:3960036-4139175:-1
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3967144-3967315:-1:exon
so has part: feature:3960036-3965772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3967144-3967315:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3960036-3965772:-1:exon

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029547674.1
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3960036..3965772,3967144..3967315,3969946..3970089,3973917..3974096,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4036537..4036671,4045924..4045972))
location: region:3960036-4045972:-1
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980478-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967144-3967315:-1:exon
so has part: feature:3960036-3965772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3980478-3980597:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3973917-3974096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3967144-3967315:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3960036-3965772:-1:exon

Celf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Celf2
product: CUGBP Elav-like family member 2, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021215265.2
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3966365..3967315,3969946..3970089,3973917..3974114,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4370941..4370976,4590614..4590652,4802224..4802288,4802503..4802604))
location: region:3966365-4802604:-1
so has part: feature:4802503-4802604:-1:exon
so has part: feature:4802224-4802288:-1:exon
so has part: feature:4590614-4590652:-1:exon
so has part: feature:4370941-4370976:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980478-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3966365-3967315:-1:exon

position:3966365:-1
position: 3966365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4802503-4802604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4802224-4802288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4590614-4590652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4370941-4370976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3980478-3980597:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3966365-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X19
translation: MVSLITDLDSLRGWKALRETATELSGSPPSNGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3973917..3974096,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4370941..4370976,4487569..4487621))
location: region:3967188-4487621:-1
so has part: feature:4487569-4487621:-1:exon
so has part: feature:4370941-4370976:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980478-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_021070928.1
type: Protein
SIO_000068: ncbiprotein

position:3967188:-1
position: 3967188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4487621:-1
position: 4487621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4487569-4487621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4370941-4370976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3980478-3980597:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3973917-3974096:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X10
translation: MVSLITDLDSLRGWKALRETATELSGSPPSNGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974096,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4370941..4370976,4487569..4487621))
location: region:3967188-4487621:-1
so has part: feature:4487569-4487621:-1:exon
so has part: feature:4370941-4370976:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980478-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_021070920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4487569-4487621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4370941-4370976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3980478-3980597:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3973917-3974096:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X7
translation: MVSLITDLDSLRGWKALRETATELSGSPPSNGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTINSMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974096,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4370941..4370976,4487569..4487621))
location: region:3967188-4487621:-1
so has part: feature:4487569-4487621:-1:exon
so has part: feature:4370941-4370976:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_021070919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4487569-4487621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4370941-4370976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3973917-3974096:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X4
translation: MVSLITDLDSLRGWKALRETATELSGSPPSNGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTINIAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4370941..4370976,4487569..4487621))
location: region:3967188-4487621:-1
so has part: feature:4487569-4487621:-1:exon
so has part: feature:4370941-4370976:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_029403521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4487569-4487621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4370941-4370976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X8
translation: MRETATELSGSPPSNGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTINIAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4370941..4370976,4380857..4380861))
location: region:3967188-4380861:-1
so has part: feature:4380857-4380861:-1:exon
so has part: feature:4370941-4370976:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_029403523.1
type: Protein
SIO_000068: ncbiprotein

position:4380861:-1
position: 4380861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4380857-4380861:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4370941-4370976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X18
translation: MFERTSELAFVETISVESMRCPKSAVTMRNEELLLSNGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3973917..3974096,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4290878..4290984))
location: region:3967188-4290984:-1
so has part: feature:4290878-4290984:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980478-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_029403533.1
type: Protein
SIO_000068: ncbiprotein

position:4290984:-1
position: 4290984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4290878-4290984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3980478-3980597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3973917-3974096:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X5
translation: MFERTSELAFVETISVESMRCPKSAVTMRNEELLLSNGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974096,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4290878..4290984))
location: region:3967188-4290984:-1
so has part: feature:4290878-4290984:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980478-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_021070923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4290878-4290984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3980478-3980597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3973917-3974096:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X2
translation: MFERTSELAFVETISVESMRCPKSAVTMRNEELLLSNGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974114,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4290878..4290984))
location: region:3967188-4290984:-1
so has part: feature:4290878-4290984:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980478-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_021070921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4290878-4290984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3980478-3980597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X3
translation: MFERTSELAFVETISVESMRCPKSAVTMRNEELLLSNGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTINSMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974096,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4290878..4290984))
location: region:3967188-4290984:-1
so has part: feature:4290878-4290984:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_021070922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4290878-4290984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3973917-3974096:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X1
translation: MFERTSELAFVETISVESMRCPKSAVTMRNEELLLSNGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTINIAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4290878..4290984))
location: region:3967188-4290984:-1
so has part: feature:4290878-4290984:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_029403520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4290878-4290984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X11
translation: MTSAFKLDFLPDMMVEGRLLVADRINGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974096,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4277961..4278034))
location: region:3967188-4278034:-1
so has part: feature:4277961-4278034:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980478-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_029403525.1
type: Protein
SIO_000068: ncbiprotein

position:4278034:-1
position: 4278034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4277961-4278034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3980478-3980597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3973917-3974096:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X9
translation: MTSAFKLDFLPDMMVEGRLLVADRINGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974114,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4277961..4278034))
location: region:3967188-4278034:-1
so has part: feature:4277961-4278034:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980478-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_029403524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4277961-4278034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3980478-3980597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X6
translation: MTSAFKLDFLPDMMVEGRLLVADRINGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTINIAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139175,4277961..4278034))
location: region:3967188-4278034:-1
so has part: feature:4277961-4278034:-1:exon
so has part: feature:4138979-4139175:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_029403522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4277961-4278034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4138979-4139175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X17
translation: MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974096,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139156))
location: region:3967188-4139156:-1
so has part: feature:4138979-4139156:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980478-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_021070926.1
type: Protein
SIO_000068: ncbiprotein

position:4139156:-1
position: 4139156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4138979-4139156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3980478-3980597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3973917-3974096:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X17
translation: MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974096,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139156))
location: region:3967188-4139156:-1
so has part: feature:4138979-4139156:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980478-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_021070927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4138979-4139156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3980478-3980597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3973917-3974096:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X15
translation: MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974114,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139156))
location: region:3967188-4139156:-1
so has part: feature:4138979-4139156:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980478-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_021070924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4138979-4139156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3980478-3980597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X15
translation: MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974114,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139156))
location: region:3967188-4139156:-1
so has part: feature:4138979-4139156:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980478-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_029403532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4138979-4139156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3980478-3980597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X13
translation: MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTINSMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3973917..3974096,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139156))
location: region:3967188-4139156:-1
so has part: feature:4138979-4139156:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_029403527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4138979-4139156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3973917-3974096:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X16
translation: MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTINSMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974096,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139156))
location: region:3967188-4139156:-1
so has part: feature:4138979-4139156:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_021070925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4138979-4139156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3973917-3974096:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X12
translation: MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTINIAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139156))
location: region:3967188-4139156:-1
so has part: feature:4138979-4139156:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_029403526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4138979-4139156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X14
translation: MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTINIAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139156))
location: region:3967188-4139156:-1
so has part: feature:4138979-4139156:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_029403528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4138979-4139156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X14
translation: MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTINIAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139156))
location: region:3967188-4139156:-1
so has part: feature:4138979-4139156:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_029403529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4138979-4139156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X14
translation: MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTINIAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139156))
location: region:3967188-4139156:-1
so has part: feature:4138979-4139156:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_029403530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4138979-4139156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X14
translation: MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTINIAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974114,3980466..3980597,4009296..4009430,4021086..4021149,4024845..4025003,4028702..4028781,4036537..4036671,4045924..4045972,4080749..4080831,4138979..4139156))
location: region:3967188-4139156:-1
so has part: feature:4138979-4139156:-1:exon
so has part: feature:4080749-4080831:-1:exon
so has part: feature:4045924-4045972:-1:exon
so has part: feature:4036537-4036671:-1:exon
so has part: feature:4028702-4028781:-1:exon
so has part: feature:4024845-4025003:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980466-3980597:-1:exon
so has part: feature:3973917-3974114:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_029403531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4138979-4139156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4080749-4080831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045924-4045972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4036537-4036671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4028702-4028781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4024845-4025003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3980466-3980597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3973917-3974114:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3967188-3967315:-1:exon

Celf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Celf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 2 isoform X20
translation: MQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
SIO_010081: Celf2
subclass of: SO_0000673
so part of: Celf2
location: complement(join(3967188..3967315,3969946..3970089,3973917..3974096,3980478..3980597,4009296..4009430,4021086..4021149,4024845..4024916))
location: region:3967188-4024916:-1
so has part: feature:4024845-4024916:-1:exon
so has part: feature:4021086-4021149:-1:exon
so has part: feature:4009296-4009430:-1:exon
so has part: feature:3980478-3980597:-1:exon
so has part: feature:3973917-3974096:-1:exon
so has part: feature:3969946-3970089:-1:exon
so has part: feature:3967188-3967315:-1:exon

XP_029403534.1
type: Protein
SIO_000068: ncbiprotein

position:4024916:-1
position: 4024916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4024845-4024916:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4021086-4021149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4009296-4009430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3980478-3980597:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3973917-3974096:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3969946-3970089:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3967188-3967315:-1:exon

LOC115065654
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115065654
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 4751740..4751835
location: region:4751740-4751835:1
so has part: feature:4751740-4751835:1:exon

115065654
type: Gene
SIO_000068: ncbigene

position:4751740:1
position: 4751740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4751835:1
position: 4751835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4751740-4751835:1:exon

LOC115065654
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC115065654
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC115065654
subclass of: SO_0000673
so part of: LOC115065654
location: 4751740..4751835
location: region:4751740-4751835:1
so has part: feature:4751740-4751835:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4751740-4751835:1:exon

LOC110334237
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110334237
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5643718..5644454)
location: region:5643718-5644454:-1
so has part: feature:5643718-5644454:-1:exon

110334237
type: Gene
SIO_000068: ncbigene

position:5643718:-1
position: 5643718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5644454:-1
position: 5644454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5643718-5644454:-1:exon

LOC110334237
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110334237
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110334237
subclass of: SO_0000673
so part of: LOC110334237
location: complement(5643718..5644454)
location: region:5643718-5644454:-1
so has part: feature:5643718-5644454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5643718-5644454:-1:exon

LOC110333998
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110333998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6563191..6563787
location: region:6563191-6563787:1
so has part: feature:6563191-6563787:1:exon

110333998
type: Gene
SIO_000068: ncbigene

position:6563191:1
position: 6563191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6563787:1
position: 6563787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6563191-6563787:1:exon

LOC110333998
type: Exon
subclass of: SO_0000147
RO_0002162: 10093
gene: LOC110333998
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110333998
subclass of: SO_0000673
so part of: LOC110333998
location: 6563191..6563787
location: region:6563191-6563787:1
so has part: feature:6563191-6563787:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6563191-6563787:1:exon

Gata3
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Gata3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7015934..7036938)
location: region:7015934-7036938:-1
so has part: feature:7015934-7036938:-1:exon
subclass of: SO_0000010

110333775
type: Gene
SIO_000068: ncbigene

position:7015934:-1
position: 7015934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7036938:-1
position: 7036938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7015934-7036938:-1:exon

Gata3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Gata3
product: GATA binding protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021215479.2
SIO_010081: Gata3
subclass of: SO_0000673
so part of: Gata3
location: complement(join(7015934..7016730,7021368..7021493,7027034..7027176,7032764..7033300,7035649..7036298,7036722..7036938))
location: region:7015934-7036938:-1
so has part: feature:7036722-7036938:-1:exon
so has part: feature:7035649-7036298:-1:exon
so has part: feature:7032764-7033300:-1:exon
so has part: feature:7027034-7027176:-1:exon
so has part: feature:7021368-7021493:-1:exon
so has part: feature:7015934-7016730:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7036722-7036938:-1:exon

position:7036722:-1
position: 7036722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7035649-7036298:-1:exon

position:7035649:-1
position: 7035649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7036298:-1
position: 7036298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7032764-7033300:-1:exon

position:7032764:-1
position: 7032764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7033300:-1
position: 7033300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7027034-7027176:-1:exon

position:7027034:-1
position: 7027034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7027176:-1
position: 7027176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7021368-7021493:-1:exon

position:7021368:-1
position: 7021368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7021493:-1
position: 7021493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7015934-7016730:-1:exon

position:7016730:-1
position: 7016730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Gata3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Gata3
product: GATA binding protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 12 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021215478.2
SIO_010081: Gata3
subclass of: SO_0000673
so part of: Gata3
location: complement(join(7015934..7016730,7021368..7021493,7027034..7027179,7032764..7033300,7035649..7036298,7036722..7036938))
location: region:7015934-7036938:-1
so has part: feature:7036722-7036938:-1:exon
so has part: feature:7035649-7036298:-1:exon
so has part: feature:7032764-7033300:-1:exon
so has part: feature:7027034-7027179:-1:exon
so has part: feature:7021368-7021493:-1:exon
so has part: feature:7015934-7016730:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7036722-7036938:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7035649-7036298:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7032764-7033300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7027034-7027179:-1:exon

position:7027179:-1
position: 7027179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7021368-7021493:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7015934-7016730:-1:exon

Gata3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Gata3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trans-acting T-cell-specific transcription factor GATA-3 isoform X2
translation: MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLGHSYMEATQYPLTEEVDVLFNIDGQGNHVPSYYGNSVRATVQRYPPTHHGSQVCRPPLLHGSLPWLDGSKALSSHHTASPWNLSPFSKTSIHHGSPGPLSVYPPASSSSLAAGHSSPHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDEKECLKYQVQLPDSMKLETSHSRGSMTTLGGASSSAHHPITTYPPYVPEYSSGLFPPSSLLGGSPTGFGCKSRPKARSSTGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQTRNRKMSSKSKKCKKVHDALEDFPKSSSFNPAALSRHMSSLSHISPFSHSSHMLTTPTPMHPPSGLSFGPHHPSSMVTAMG
SIO_010081: Gata3
subclass of: SO_0000673
so part of: Gata3
location: complement(join(7016446..7016730,7021368..7021493,7027034..7027176,7032764..7033300,7035649..7035889))
location: region:7016446-7035889:-1
so has part: feature:7035649-7035889:-1:exon
so has part: feature:7032764-7033300:-1:exon
so has part: feature:7027034-7027176:-1:exon
so has part: feature:7021368-7021493:-1:exon
so has part: feature:7016446-7016730:-1:exon

XP_021071138.1
type: Protein
SIO_000068: ncbiprotein

position:7016446:-1
position: 7016446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7035889:-1
position: 7035889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7035649-7035889:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7032764-7033300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7027034-7027176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7021368-7021493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7016446-7016730:-1:exon

Gata3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Gata3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trans-acting T-cell-specific transcription factor GATA-3 isoform X1
translation: MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLGHSYMEATQYPLTEEVDVLFNIDGQGNHVPSYYGNSVRATVQRYPPTHHGSQVCRPPLLHGSLPWLDGSKALSSHHTASPWNLSPFSKTSIHHGSPGPLSVYPPASSSSLAAGHSSPHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDEKECLKYQVQLPDSMKLETSHSRGSMTTLGGASSSAHHPITTYPPYVPEYSSGLFPPSSLLGGSPTGFGCKSRPKARSSTEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQTRNRKMSSKSKKCKKVHDALEDFPKSSSFNPAALSRHMSSLSHISPFSHSSHMLTTPTPMHPPSGLSFGPHHPSSMVTAMG
SIO_010081: Gata3
subclass of: SO_0000673
so part of: Gata3
location: complement(join(7016446..7016730,7021368..7021493,7027034..7027179,7032764..7033300,7035649..7035889))
location: region:7016446-7035889:-1
so has part: feature:7035649-7035889:-1:exon
so has part: feature:7032764-7033300:-1:exon
so has part: feature:7027034-7027179:-1:exon
so has part: feature:7021368-7021493:-1:exon
so has part: feature:7016446-7016730:-1:exon

XP_021071137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7035649-7035889:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7032764-7033300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7027034-7027179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7021368-7021493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7016446-7016730:-1:exon

Gata3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Gata3
product: GATA binding protein 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029547696.1
SIO_010081: Gata3
subclass of: SO_0000673
so part of: Gata3
location: complement(join(7016587..7016722,7021368..7021493,7027034..7027176,7032764..7033300,7035649..7036100))
location: region:7016587-7036100:-1
so has part: feature:7035649-7036100:-1:exon
so has part: feature:7032764-7033300:-1:exon
so has part: feature:7027034-7027176:-1:exon
so has part: feature:7021368-7021493:-1:exon
so has part: feature:7016587-7016722:-1:exon

position:7016587:-1
position: 7016587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7036100:-1
position: 7036100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7035649-7036100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7032764-7033300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7027034-7027176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7021368-7021493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7016587-7016722:-1:exon

position:7016722:-1
position: 7016722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Gata3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Gata3
product: GATA binding protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029547695.1
SIO_010081: Gata3
subclass of: SO_0000673
so part of: Gata3
location: complement(join(7016587..7016722,7021368..7021493,7027034..7027179,7032764..7033300,7035649..7036100))
location: region:7016587-7036100:-1
so has part: feature:7035649-7036100:-1:exon
so has part: feature:7032764-7033300:-1:exon
so has part: feature:7027034-7027179:-1:exon
so has part: feature:7021368-7021493:-1:exon
so has part: feature:7016587-7016722:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7035649-7036100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7032764-7033300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7027034-7027179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7021368-7021493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7016587-7016722:-1:exon

Gata3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Gata3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trans-acting T-cell-specific transcription factor GATA-3 isoform X4
translation: MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLGHSYMEATQYPLTEEVDVLFNIDGQGNHVPSYYGNSVRATVQRYPPTHHGSQVCRPPLLHGSLPWLDGSKALSSHHTASPWNLSPFSKTSIHHGSPGPLSVYPPASSSSLAAGHSSPHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDEKECLKYQVQLPDSMKLETSHSRGSMTTLGGASSSAHHPITTYPPYVPEYSSGLFPPSSLLGGSPTGFGCKSRPKARSSTGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNTPDYEEGRHPDPKPEDV
SIO_010081: Gata3
subclass of: SO_0000673
so part of: Gata3
location: complement(join(7016669..7016722,7021368..7021493,7027034..7027176,7032764..7033300,7035649..7035889))
location: region:7016669-7035889:-1
so has part: feature:7035649-7035889:-1:exon
so has part: feature:7032764-7033300:-1:exon
so has part: feature:7027034-7027176:-1:exon
so has part: feature:7021368-7021493:-1:exon
so has part: feature:7016669-7016722:-1:exon

XP_029403556.1
type: Protein
SIO_000068: ncbiprotein

position:7016669:-1
position: 7016669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7035649-7035889:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7032764-7033300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7027034-7027176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7021368-7021493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7016669-7016722:-1:exon

Gata3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Gata3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trans-acting T-cell-specific transcription factor GATA-3 isoform X3
translation: MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLGHSYMEATQYPLTEEVDVLFNIDGQGNHVPSYYGNSVRATVQRYPPTHHGSQVCRPPLLHGSLPWLDGSKALSSHHTASPWNLSPFSKTSIHHGSPGPLSVYPPASSSSLAAGHSSPHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDEKECLKYQVQLPDSMKLETSHSRGSMTTLGGASSSAHHPITTYPPYVPEYSSGLFPPSSLLGGSPTGFGCKSRPKARSSTEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNTPDYEEGRHPDPKPEDV
SIO_010081: Gata3
subclass of: SO_0000673
so part of: Gata3
location: complement(join(7016669..7016722,7021368..7021493,7027034..7027179,7032764..7033300,7035649..7035889))
location: region:7016669-7035889:-1
so has part: feature:7035649-7035889:-1:exon
so has part: feature:7032764-7033300:-1:exon
so has part: feature:7027034-7027179:-1:exon
so has part: feature:7021368-7021493:-1:exon
so has part: feature:7016669-7016722:-1:exon

XP_029403555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7035649-7035889:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7032764-7033300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7027034-7027179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7021368-7021493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7016669-7016722:-1:exon

LOC110333776
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC110333776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7041380..7048002)
location: region:7041380-7048002:-1
so has part: feature:7041380-7048002:-1:exon
subclass of: SO_0000010

110333776
type: Gene
SIO_000068: ncbigene

position:7041380:-1
position: 7041380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7048002:-1
position: 7048002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7041380-7048002:-1:exon

LOC110333776
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: LOC110333776
product: uncharacterized LOC110333776
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021215482.2
SIO_010081: LOC110333776
subclass of: SO_0000673
so part of: LOC110333776
location: complement(join(7041380..7041681,7042107..7042149,7046052..7046113,7047674..7048002))
location: region:7041380-7048002:-1
so has part: feature:7047674-7048002:-1:exon
so has part: feature:7046052-7046113:-1:exon
so has part: feature:7042107-7042149:-1:exon
so has part: feature:7041380-7041681:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7047674-7048002:-1:exon

position:7047674:-1
position: 7047674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7046052-7046113:-1:exon

position:7046052:-1
position: 7046052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7046113:-1
position: 7046113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7042107-7042149:-1:exon

position:7042107:-1
position: 7042107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7042149:-1
position: 7042149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7041380-7041681:-1:exon

position:7041681:-1
position: 7041681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110333776
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: LOC110333776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110333776
translation: MVLPGSPMDQKTPFFPFARLANGVLSLLHSWVHRTPKDAPPRRRRVSSKAGGKNKTQPAFRRELPCSCGRKRKEDMVKAKALWIDPAAAAPTQAPRKNSGPGDDQGRVSYRGLLGADLAPRSRLSFTTSMPKTK
SIO_010081: LOC110333776
subclass of: SO_0000673
so part of: LOC110333776
location: complement(join(7041517..7041681,7042107..7042149,7046052..7046113,7047674..7047808))
location: region:7041517-7047808:-1
so has part: feature:7047674-7047808:-1:exon
so has part: feature:7046052-7046113:-1:exon
so has part: feature:7042107-7042149:-1:exon
so has part: feature:7041517-7041681:-1:exon

XP_021071141.1
type: Protein
SIO_000068: ncbiprotein

position:7041517:-1
position: 7041517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7047808:-1
position: 7047808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7047674-7047808:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7046052-7046113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7042107-7042149:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7041517-7041681:-1:exon

Taf3
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Taf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7073331..7222328)
location: region:7073331-7222328:-1
so has part: feature:7073331-7222328:-1:exon
subclass of: SO_0000010

110333653
type: Gene
SIO_000068: ncbigene

position:7073331:-1
position: 7073331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7222328:-1
position: 7222328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7073331-7222328:-1:exon

Taf3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Taf3
product: TATA-box binding protein associated factor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 mRNAs, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021215323.1
SIO_010081: Taf3
subclass of: SO_0000673
so part of: Taf3
location: complement(join(7073331..7075274,7076901..7077007,7079978..7080227,7098897..7098979,7109112..7110943,7216220..7216462,7221939..7222328))
location: region:7073331-7222328:-1
so has part: feature:7221939-7222328:-1:exon
so has part: feature:7216220-7216462:-1:exon
so has part: feature:7109112-7110943:-1:exon
so has part: feature:7098897-7098979:-1:exon
so has part: feature:7079978-7080227:-1:exon
so has part: feature:7076901-7077007:-1:exon
so has part: feature:7073331-7075274:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7221939-7222328:-1:exon

position:7221939:-1
position: 7221939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7216220-7216462:-1:exon

position:7216220:-1
position: 7216220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7216462:-1
position: 7216462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7109112-7110943:-1:exon

position:7109112:-1
position: 7109112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7110943:-1
position: 7110943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7098897-7098979:-1:exon

position:7098897:-1
position: 7098897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7098979:-1
position: 7098979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7079978-7080227:-1:exon

position:7079978:-1
position: 7079978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7080227:-1
position: 7080227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7076901-7077007:-1:exon

position:7076901:-1
position: 7076901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7077007:-1
position: 7077007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7073331-7075274:-1:exon

position:7075274:-1
position: 7075274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Taf3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Taf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 3
translation: MCESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPILDDVGEAFQLMGVNLHELEDYIHNIEPVTFPHQIPSFPVSKNNVLQFPQPGSKDAEERKDYIPDYLPPIVSSQEEEEEEQVPTDGGTSAEAMQVPLEEDDEMEEEEVINDENFLGKRPLDSPEVEEMPSMKRPRLLSTKGDSLDVVLLEAREPLSSINPQKIPPMLSPVHVQDSTDLAPPSPEPPMLAPFAKSQLPIAKPLETKSFTPKTKTKASSPGQKTKSPKAALSPARLGSPIRSPKTIPKEKKSPGRSKSPKSPKSPKIVAHVPQTPVRPETPNRIPSAMVVEKTVKETIPVMKPTQTPPEVVKLNIEMQPKKAVVVTDKTIDDSIDAVIARACAEREPDPFEFSSGSESEGDTFTSPKRTAGSECTAPKASTSSSNLTKSLATPLPLSGGTSSSDNSWTMDASIDEVVRKAKLGAPSNMPPTFPYISSPSISPPTPEPLHKGYEEKAKLPPSVDVKKKLKKELKTKLKKKEKQRDRERERERNKERSKEKDKMREREKEKEAGKELKYPWRELMKDEDSDPYKFKIKEFEDIDAKVRLKDGIVRREREKHKDKKKDRERSKREKEKRERERLKEKNREDKIKAPPTQLVLPPKEMALPLFSPSAVRVPAMLPAFSPMLPEKLFEEKEKPKEKERKKDKKEKKKKKEKEKEKEKKEREREKERREREKREKEKEKHKHEKIKVEPVIPAPSPVIPRLTLRVGAGQDKIVISKVVPAPEAKPAPSLNRPKTPPPAPVPIPVRVSPTPLQPPLLTQAAVCPALMPSPAPALSGVASAKAPVRSVVTETVSTYVIRDEWGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIKKDKKHKKRKHRAH
SIO_010081: Taf3
subclass of: SO_0000673
so part of: Taf3
location: complement(join(7075157..7075274,7076901..7077007,7079978..7080227,7098897..7098979,7109112..7110943,7216220..7216462,7221939..7222104))
location: region:7075157-7222104:-1
so has part: feature:7221939-7222104:-1:exon
so has part: feature:7216220-7216462:-1:exon
so has part: feature:7109112-7110943:-1:exon
so has part: feature:7098897-7098979:-1:exon
so has part: feature:7079978-7080227:-1:exon
so has part: feature:7076901-7077007:-1:exon
so has part: feature:7075157-7075274:-1:exon

XP_021070982.1
type: Protein
SIO_000068: ncbiprotein

position:7075157:-1
position: 7075157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7222104:-1
position: 7222104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7221939-7222104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7216220-7216462:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7109112-7110943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7098897-7098979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7079978-7080227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7076901-7077007:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7075157-7075274:-1:exon

Atp5f1c
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Atp5f1c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7232729..7256744)
location: region:7232729-7256744:-1
so has part: feature:7232729-7256744:-1:exon
subclass of: SO_0000010

110333647
type: Gene
SIO_000068: ncbigene

position:7232729:-1
position: 7232729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7256744:-1
position: 7256744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7232729-7256744:-1:exon

Atp5f1c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Atp5f1c
product: ATP synthase F1 subunit gamma, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021215311.2
SIO_010081: Atp5f1c
subclass of: SO_0000673
so part of: Atp5f1c
location: complement(join(7232729..7232860,7233441..7233477,7235797..7235893,7236292..7236447,7239753..7239817,7239910..7240053,7240451..7240655,7245054..7245185,7245817..7245851,7256581..7256744))
location: region:7232729-7256744:-1
so has part: feature:7256581-7256744:-1:exon
so has part: feature:7245817-7245851:-1:exon
so has part: feature:7245054-7245185:-1:exon
so has part: feature:7240451-7240655:-1:exon
so has part: feature:7239910-7240053:-1:exon
so has part: feature:7239753-7239817:-1:exon
so has part: feature:7236292-7236447:-1:exon
so has part: feature:7235797-7235893:-1:exon
so has part: feature:7233441-7233477:-1:exon
so has part: feature:7232729-7232860:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7256581-7256744:-1:exon

position:7256581:-1
position: 7256581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7245817-7245851:-1:exon

position:7245817:-1
position: 7245817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7245851:-1
position: 7245851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7245054-7245185:-1:exon

position:7245054:-1
position: 7245054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7245185:-1
position: 7245185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7240451-7240655:-1:exon

position:7240451:-1
position: 7240451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7240655:-1
position: 7240655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7239910-7240053:-1:exon

position:7239910:-1
position: 7239910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7240053:-1
position: 7240053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7239753-7239817:-1:exon

position:7239753:-1
position: 7239753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7239817:-1
position: 7239817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7236292-7236447:-1:exon

position:7236292:-1
position: 7236292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7236447:-1
position: 7236447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7235797-7235893:-1:exon

position:7235797:-1
position: 7235797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7235893:-1
position: 7235893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7233441-7233477:-1:exon

position:7233441:-1
position: 7233441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7233477:-1
position: 7233477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7232729-7232860:-1:exon

position:7232860:-1
position: 7232860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Atp5f1c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Atp5f1c
product: ATP synthase F1 subunit gamma, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029547403.1
SIO_010081: Atp5f1c
subclass of: SO_0000673
so part of: Atp5f1c
location: complement(join(7232729..7232860,7235797..7235893,7236292..7236447,7239753..7239817,7239910..7240053,7240451..7240655,7245054..7245185,7245817..7245851,7256581..7256704))
location: region:7232729-7256704:-1
so has part: feature:7256581-7256704:-1:exon
so has part: feature:7245817-7245851:-1:exon
so has part: feature:7245054-7245185:-1:exon
so has part: feature:7240451-7240655:-1:exon
so has part: feature:7239910-7240053:-1:exon
so has part: feature:7239753-7239817:-1:exon
so has part: feature:7236292-7236447:-1:exon
so has part: feature:7235797-7235893:-1:exon
so has part: feature:7232729-7232860:-1:exon

position:7256704:-1
position: 7256704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7256581-7256704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7245817-7245851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7245054-7245185:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7240451-7240655:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7239910-7240053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7239753-7239817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7236292-7236447:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7235797-7235893:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7232729-7232860:-1:exon

Atp5f1c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Atp5f1c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit gamma, mitochondrial isoform X2
translation: MFSRASIVGLSACAVQPQWIQVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEKADIKSPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKNEVAALTAAGKEVMIVGVGEKIKGILYRTHSDQFLVSFKDVGRKPPTFGDASAIALELLNSGYEFDEGSIIFNQFKSVISYKTEEKPIFSLNTIASAETMSIYDDIDADVLQNYQEYNLANLIYYSLKESTTSEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL
SIO_010081: Atp5f1c
subclass of: SO_0000673
so part of: Atp5f1c
location: complement(join(7232857..7232860,7235797..7235893,7236292..7236447,7239753..7239817,7239910..7240053,7240451..7240655,7245054..7245185,7245817..7245851,7256581..7256636))
location: region:7232857-7256636:-1
so has part: feature:7256581-7256636:-1:exon
so has part: feature:7245817-7245851:-1:exon
so has part: feature:7245054-7245185:-1:exon
so has part: feature:7240451-7240655:-1:exon
so has part: feature:7239910-7240053:-1:exon
so has part: feature:7239753-7239817:-1:exon
so has part: feature:7236292-7236447:-1:exon
so has part: feature:7235797-7235893:-1:exon
so has part: feature:7232857-7232860:-1:exon

XP_029403263.1
type: Protein
SIO_000068: ncbiprotein

position:7232857:-1
position: 7232857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7256636:-1
position: 7256636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7256581-7256636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7245817-7245851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7245054-7245185:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7240451-7240655:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7239910-7240053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7239753-7239817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7236292-7236447:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7235797-7235893:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7232857-7232860:-1:exon

Atp5f1c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Atp5f1c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit gamma, mitochondrial isoform X1
translation: MFSRASIVGLSACAVQPQWIQVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEKADIKSPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKNEVAALTAAGKEVMIVGVGEKIKGILYRTHSDQFLVSFKDVGRKPPTFGDASAIALELLNSGYEFDEGSIIFNQFKSVISYKTEEKPIFSLNTIASAETMSIYDDIDADVLQNYQEYNLANLIYYSLKESTTSEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAALN
SIO_010081: Atp5f1c
subclass of: SO_0000673
so part of: Atp5f1c
location: complement(join(7233471..7233477,7235797..7235893,7236292..7236447,7239753..7239817,7239910..7240053,7240451..7240655,7245054..7245185,7245817..7245851,7256581..7256636))
location: region:7233471-7256636:-1
so has part: feature:7256581-7256636:-1:exon
so has part: feature:7245817-7245851:-1:exon
so has part: feature:7245054-7245185:-1:exon
so has part: feature:7240451-7240655:-1:exon
so has part: feature:7239910-7240053:-1:exon
so has part: feature:7239753-7239817:-1:exon
so has part: feature:7236292-7236447:-1:exon
so has part: feature:7235797-7235893:-1:exon
so has part: feature:7233471-7233477:-1:exon

XP_021070970.1
type: Protein
SIO_000068: ncbiprotein

position:7233471:-1
position: 7233471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7256581-7256636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7245817-7245851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7245054-7245185:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7240451-7240655:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7239910-7240053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7239753-7239817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7236292-7236447:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7235797-7235893:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7233471-7233477:-1:exon

LOC115065682
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: LOC115065682
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7251640..7251771)
location: region:7251640-7251771:-1
so has part: feature:7251640-7251771:-1:exon
subclass of: SO_0000578

115065682
type: Gene
SIO_000068: ncbigene

position:7251640:-1
position: 7251640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7251771:-1
position: 7251771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7251640-7251771:-1:exon

LOC115065682
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10093
nc RNA class: snoRNA
gene: LOC115065682
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003845449.1
SIO_010081: LOC115065682
subclass of: SO_0000673
so part of: LOC115065682
location: complement(7251640..7251771)
location: region:7251640-7251771:-1
so has part: feature:7251640-7251771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7251640-7251771:-1:exon

Kin
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Kin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7256396..7269927
location: region:7256396-7269927:1
so has part: feature:7256396-7269927:1:exon
subclass of: SO_0000010

110333645
type: Gene
SIO_000068: ncbigene

position:7256396:1
position: 7256396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7269927:1
position: 7269927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7256396-7269927:1:exon

Kin
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Kin
product: Kin17 DNA and RNA binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 6 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021215310.2
SIO_010081: Kin
subclass of: SO_0000673
so part of: Kin
location: join(7256396..7256978,7262174..7262268,7267146..7267189,7267273..7267395,7268940..7269927)
location: region:7256396-7269927:1
so has part: feature:7256396-7256978:1:exon
so has part: feature:7262174-7262268:1:exon
so has part: feature:7267146-7267189:1:exon
so has part: feature:7267273-7267395:1:exon
so has part: feature:7268940-7269927:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7256396-7256978:1:exon

position:7256978:1
position: 7256978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7262174-7262268:1:exon

position:7262174:1
position: 7262174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7262268:1
position: 7262268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7267146-7267189:1:exon

position:7267146:1
position: 7267146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7267189:1
position: 7267189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7267273-7267395:1:exon

position:7267273:1
position: 7267273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7267395:1
position: 7267395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7268940-7269927:1:exon

position:7268940:1
position: 7268940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Kin
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Kin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA/RNA-binding protein KIN17
translation: MGKSDFLSPKAIANRIKSKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQLLLASENPQQFMDYFSEEFRNDFLELLRRRFGTKRVHNNIVYNEYISHREHIHMNATQWETLTDFTKWLGREGLCKVDETPKGWYIQYIDRDPETIRRQLELEKKKKQDLDDEEKTAKFIEEQVRRGLEGKEQETPVFTELSRENEEEKVTFNLNKGAGGSAGATTSKSSSLGPSALKLLGNTASGKRKESSQSSAQAAKKKKKSALDEIMEIEEEKKRTARTDSWLQPGIIVKIITKKLGEKYHKKKGVIKEVIDRYTAVVKMTDSGDRLKLDQTHLETVIPAPGKRVLVLNGGYRGNEGTLESINEKAFSATIVIETGPLKGRRVEGIQYEDISKLA
SIO_010081: Kin
subclass of: SO_0000673
so part of: Kin
location: join(7256865..7256978,7262174..7262268,7267146..7267189,7267273..7267395,7268940..7269742)
location: region:7256865-7269742:1
so has part: feature:7256865-7256978:1:exon
so has part: feature:7262174-7262268:1:exon
so has part: feature:7267146-7267189:1:exon
so has part: feature:7267273-7267395:1:exon
so has part: feature:7268940-7269742:1:exon

XP_021070969.1
type: Protein
SIO_000068: ncbiprotein

position:7256865:1
position: 7256865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7269742:1
position: 7269742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7256865-7256978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7262174-7262268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7267146-7267189:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7267273-7267395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7268940-7269742:1:exon

Itih2
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Itih2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7271953..7308599)
location: region:7271953-7308599:-1
so has part: feature:7271953-7308599:-1:exon
subclass of: SO_0000010

110334023
type: Gene
SIO_000068: ncbigene

position:7271953:-1
position: 7271953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7308599:-1
position: 7308599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7271953-7308599:-1:exon

Itih2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Itih2
product: inter-alpha-trypsin inhibitor heavy chain 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021215845.2
SIO_010081: Itih2
subclass of: SO_0000673
so part of: Itih2
location: complement(join(7271953..7272266,7273605..7273716,7274247..7274419,7275525..7275723,7276070..7276183,7279892..7280029,7280630..7280799,7282998..7283137,7283486..7283671,7285179..7285360,7288100..7288225,7289077..7289245,7293188..7293304,7294755..7294883,7295488..7295595,7297672..7297834,7301338..7301442,7304019..7304188,7305644..7305676,7307140..7307214,7308369..7308599))
location: region:7271953-7308599:-1
so has part: feature:7308369-7308599:-1:exon
so has part: feature:7307140-7307214:-1:exon
so has part: feature:7305644-7305676:-1:exon
so has part: feature:7304019-7304188:-1:exon
so has part: feature:7301338-7301442:-1:exon
so has part: feature:7297672-7297834:-1:exon
so has part: feature:7295488-7295595:-1:exon
so has part: feature:7294755-7294883:-1:exon
so has part: feature:7293188-7293304:-1:exon
so has part: feature:7289077-7289245:-1:exon
so has part: feature:7288100-7288225:-1:exon
so has part: feature:7285179-7285360:-1:exon
so has part: feature:7283486-7283671:-1:exon
so has part: feature:7282998-7283137:-1:exon
so has part: feature:7280630-7280799:-1:exon
so has part: feature:7279892-7280029:-1:exon
so has part: feature:7276070-7276183:-1:exon
so has part: feature:7275525-7275723:-1:exon
so has part: feature:7274247-7274419:-1:exon
so has part: feature:7273605-7273716:-1:exon
so has part: feature:7271953-7272266:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7308369-7308599:-1:exon

position:7308369:-1
position: 7308369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7307140-7307214:-1:exon

position:7307140:-1
position: 7307140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7307214:-1
position: 7307214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7305644-7305676:-1:exon

position:7305644:-1
position: 7305644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7305676:-1
position: 7305676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7304019-7304188:-1:exon

position:7304019:-1
position: 7304019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7304188:-1
position: 7304188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7301338-7301442:-1:exon

position:7301338:-1
position: 7301338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7301442:-1
position: 7301442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7297672-7297834:-1:exon

position:7297672:-1
position: 7297672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7297834:-1
position: 7297834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7295488-7295595:-1:exon

position:7295488:-1
position: 7295488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7295595:-1
position: 7295595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7294755-7294883:-1:exon

position:7294755:-1
position: 7294755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7294883:-1
position: 7294883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7293188-7293304:-1:exon

position:7293188:-1
position: 7293188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7293304:-1
position: 7293304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7289077-7289245:-1:exon

position:7289077:-1
position: 7289077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7289245:-1
position: 7289245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7288100-7288225:-1:exon

position:7288100:-1
position: 7288100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7288225:-1
position: 7288225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7285179-7285360:-1:exon

position:7285179:-1
position: 7285179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7285360:-1
position: 7285360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7283486-7283671:-1:exon

position:7283486:-1
position: 7283486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7283671:-1
position: 7283671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7282998-7283137:-1:exon

position:7282998:-1
position: 7282998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7283137:-1
position: 7283137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7280630-7280799:-1:exon

position:7280630:-1
position: 7280630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7280799:-1
position: 7280799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7279892-7280029:-1:exon

position:7279892:-1
position: 7279892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7280029:-1
position: 7280029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7276070-7276183:-1:exon

position:7276070:-1
position: 7276070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7276183:-1
position: 7276183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7275525-7275723:-1:exon

position:7275525:-1
position: 7275525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7275723:-1
position: 7275723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7274247-7274419:-1:exon

position:7274247:-1
position: 7274247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7274419:-1
position: 7274419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7273605-7273716:-1:exon

position:7273605:-1
position: 7273605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7273716:-1
position: 7273716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7271953-7272266:-1:exon

position:7272266:-1
position: 7272266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Itih2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10093
gene: Itih2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inter-alpha-trypsin inhibitor heavy chain H2
translation: MSSKMQQPVCLLIWLFLLEAQAFEIPINGYSEFAEYNDLVELAPDKLTFVQENGRHQRSLPEESGEEMDTVDPVTLYSYKVQSTITSRMATTTIQSKLVNNSPMPQSVVFDVQIPKGAFISNFTMTVNGMTFTSSIKEKTVGRALYSQARAKGKTAGWVRSRTLDMENFNTEVNIPPGAKVQFELHYQEVKWRKLGSYEHKIHLQPGKLAKHLEVNVWIIEPQGMRFLHVPDTFEGHFQGVPVVSKGQQKAHVSFKPTVAQQRKCPNCTETAVNGELVVMYDVNREEKAGELEVFNGYFVHFFAPENLDPIPKNILFVIDVSGSMWGIKMKQTVEAMKTILDDLRTDDQFSVVDFNHNVRTWRNDLVSATKTQIADAKRYIEKIQPSGGTNINEALLRAIFILNEASNMGLLNPDSVSLIILVSDGDPTVGELKLSKIQKNVKQSIQDNISLFSLGIGFDVDYDFLKRLSNENRGIAQRIYGNQDTSSQLKKFYNQVSTPLLRNVQFNYPQASVTDVTQNNFHNYFGGSEIVVAGKFDPSKLSEVQSIITATSANTEMVLETLSQMDDLEEFLSKDKHADPDFTKKLWAYLTVNQLLAERSLAPTAAIKRKITKTILQMSLDHHIVTPLTAMVIENDAGDERMLADSPPQDHSCCSGALYYGTKVASGPIPSWANPSPTPMSAMLAVGAKPLESTPPPHLNQVENDPHFIIYLPKSKKNICFNIDSEPGKILSLVSDPESGILVNGQLIGAKKAENGKLSTYFGKLGFYFQKEGMKLEISTETITLSSGSSTSQLSWSDTAHLGNSRVLISVKKEKSVTLTLNKELFFSVLLHRVWRKHPVNVDFLGIYAPPTDKFSPSVHGLLGQFMQEPAIHIFNERPGKEPGKPEASMEVKGHKLTVTRGIQKDYRTDIVFGTDVPCWFVHNSGKGFIDGHYKDYFVPQLYSFLKRP
SIO_010081: Itih2
subclass of: SO_0000673
so part of: Itih2
location: complement(join(7272119..7272266,7273605..7273716,7274247..7274419,7275525..7275723,7276070..7276183,7279892..7280029,7280630..7280799,7282998..7283137,7283486..7283671,7285179..7285360,7288100..7288225,7289077..7289245,7293188..7293304,7294755..7294883,7295488..7295595,7297672..7297834,7301338..7301442,7304019..7304188,7305644..7305676,7307140..7307214,7308369..7308464))
location: region:7272119-7308464:-1
so has part: feature:7308369-7308464:-1:exon
so has part: feature:7307140-7307214:-1:exon
so has part: feature:7305644-7305676:-1:exon
so has part: feature:7304019-7304188:-1:exon
so has part: feature:7301338-7301442:-1:exon
so has part: feature:7297672-7297834:-1:exon
so has part: feature:7295488-7295595:-1:exon
so has part: feature:7294755-7294883:-1:exon
so has part: feature:7293188-7293304:-1:exon
so has part: feature:7289077-7289245:-1:exon
so has part: feature:7288100-7288225:-1:exon
so has part: feature:7285179-7285360:-1:exon
so has part: feature:7283486-7283671:-1:exon
so has part: feature:7282998-7283137:-1:exon
so has part: feature:7280630-7280799:-1:exon
so has part: feature:7279892-7280029:-1:exon
so has part: feature:7276070-7276183:-1:exon
so has part: feature:7275525-7275723:-1:exon
so has part: feature:7274247-7274419:-1:exon
so has part: feature:7273605-7273716:-1:exon
so has part: feature:7272119-7272266:-1:exon

XP_021071504.1
type: Protein
SIO_000068: ncbiprotein

position:7272119:-1
position: 7272119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7308464:-1
position: 7308464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7308369-7308464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7307140-7307214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7305644-7305676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7304019-7304188:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7301338-7301442:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7297672-7297834:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7295488-7295595:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7294755-7294883:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7293188-7293304:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7289077-7289245:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7288100-7288225:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7285179-7285360:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7283486-7283671:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7282998-7283137:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7280630-7280799:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7279892-7280029:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7276070-7276183:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7275525-7275723:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7274247-7274419:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7273605-7273716:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7272119-7272266:-1:exon

Itih5
type: Gene
subclass of: SO_0000704
RO_0002162: 10093
gene: Itih5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7331809..7428387
location: region:7331809-7428387:1
so has part: feature:7331809-7428387:1:exon
subclass of: SO_0000010

110333896
type: Gene
SIO_000068: ncbigene

position:7331809:1
position: 7331809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7428387:1
position: 7428387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7331809-7428387:1:exon

Itih5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10093
gene: Itih5
product: inter-alpha-trypsin inhibitor heavy chain 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021215673.2
SIO_010081: Itih5
subclass of: SO_0000673
so part of: Itih5
location: join(7331809..7332015,7344815..7344859,7359539..7359702,7360961..7361062,7364979..7365229,7378289..7378458,7379302..7379418,7409348..7409516,7413268..7413577,7415236..7415795,7417244..7417297,7420204..7420320,7423715..7424092,7425930..7428387)
location: region:7331809-7428387:1
so has part: feature:7331809-7332015:1:exon
so has part: feature:7344815-7344859:1:exon
so has part: feature:7359539-7359702:1:exon
so has part: feature:7360961-7361062:1:exon
so has part: feature:7364979-7365229:1:exon
so has part: feature:7378289-7378458:1:exon
so has part: feature:7379302-7379418:1:exon
so has part: feature:7409348-7409516:1:exon
so has part: feature:7413268-7413577:1:exon
so has part: feature:7415236-7415795:1:exon
so has part: feature:7417244-7417297:1:exon
so has part: feature:7420204-7420320:1:exon
so has part: feature:7423715-7424092:1:exon
so has part: feature:7425930-7428387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7331809-7332015:1:exon

position:7332015:1
position: 7332015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7344815-7344859:1:exon

position:7344815:1
position: 7344815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7344859:1
position: 7344859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7359539-7359702:1:exon

position:7359539:1
position: 7359539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7359702:1
position: 7359702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7360961-7361062:1:exon

position:7360961:1
position: 7360961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7361062:1
position: 7361062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7364979-7365229:1:exon

position:7364979:1
position: 7364979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7365229:1
position: 7365229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7378289-7378458:1:exon

position:7378289:1
position: 7378289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7378458:1
position: 7378458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7379302-7379418:1:exon

position:7379302:1
position: 7379302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7379418:1
position: 7379418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7409348-7409516:1:exon

position:7409348:1
position: 7409348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7409516:1
position: 7409516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7413268-7413577:1:exon