Haladaptatus pallidirubidus strain YIM 93656 plasmid unnamed4, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haladaptataceae; Haladaptatus.
Halophilic archaea isolated from solar salterns and salt lakes
Submitted (18-OCT-2021) School of Food and Biological Engineering, Jiangsu University, No 301 Xuefu Road, Jingkou District, Zhenjiang, Zhenjiang, Jiangsu 212013, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP085305.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 4\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 658.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/30/2023 12:44:07\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,555\nCDSs (total) :: 6,488\nGenes (coding) :: 6,279\nCDSs (with protein) :: 6,279\nGenes (RNA) :: 67\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 56\nncRNAs :: 2\nPseudo Genes (total) :: 209\nCDSs (without protein) :: 209\nPseudo Genes (ambiguous residues) :: 0 of 209\nPseudo Genes (frameshifted) :: 83 of 209\nPseudo Genes (incomplete) :: 138 of 209\nPseudo Genes (internal stop) :: 62 of 209\nPseudo Genes (multiple problems) :: 59 of 209\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Haladaptatus pallidirubidus
COORDINATES: similar to AA sequence:RefSeq:WP_008313916.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004966858.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979040.1
orc1/cdc6 family replication initiation protein
COORDINATES: similar to AA sequence:RefSeq:WP_006630769.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975915.1
COORDINATES: similar to AA sequence:RefSeq:WP_008415624.1
COORDINATES: protein motif:HMM:NF037100.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nucleotidyltransferase domain-containing protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_007975914.1
COORDINATES: similar to AA sequence:RefSeq:WP_008524566.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975917.1
COORDINATES: similar to AA sequence:RefSeq:WP_008014428.1
COORDINATES: similar to AA sequence:RefSeq:WP_008012113.1
COORDINATES: similar to AA sequence:RefSeq:WP_008164890.1
COORDINATES: similar to AA sequence:RefSeq:WP_008006717.1
COORDINATES: similar to AA sequence:RefSeq:WP_013881892.1
COORDINATES: similar to AA sequence:RefSeq:WP_007740313.1
ribbon-helix-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004971997.1
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_014050653.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: similar to AA sequence:RefSeq:WP_007274269.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: protein motif:HMM:NF014081.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014050723.1
COORDINATES: protein motif:HMM:TIGR00813.1
Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system.; Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009377280.1
COORDINATES: similar to AA sequence:RefSeq:WP_014050665.1
COORDINATES: similar to AA sequence:RefSeq:WP_014050664.1
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007981519.1
COORDINATES: similar to AA sequence:RefSeq:WP_015301081.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007698448.1
COORDINATES: similar to AA sequence:RefSeq:WP_020222877.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979297.1
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: similar to AA sequence:RefSeq:WP_008895753.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010612727.1
COORDINATES: similar to AA sequence:RefSeq:WP_009377449.1
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009377447.1
COORDINATES: similar to AA sequence:RefSeq:WP_020133524.1
GO:0070967 - coenzyme F420 binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
PPOX class F420-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_006088941.1
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006108717.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890500.1
COORDINATES: similar to AA sequence:RefSeq:WP_009762297.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979292.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983045.1
COORDINATES: similar to AA sequence:RefSeq:WP_007257765.1
COORDINATES: similar to AA sequence:RefSeq:WP_008420267.1
COORDINATES: similar to AA sequence:RefSeq:WP_008010613.1
COORDINATES: similar to AA sequence:RefSeq:WP_007695259.1
GO:0006817 - phosphate ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007981530.1
COORDINATES: similar to AA sequence:RefSeq:WP_006883581.1
COORDINATES: protein motif:HMM:NF021759.2
COORDINATES: similar to AA sequence:RefSeq:WP_008421725.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388904.1
COORDINATES: similar to AA sequence:RefSeq:WP_006092672.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008014617.1
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008094615.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004517881.1
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: similar to AA sequence:RefSeq:WP_012945355.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
multicopper oxidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006180985.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007979252.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981003.1
putative phosphoglycerol geranylgeranyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007982846.1
COORDINATES: similar to AA sequence:RefSeq:WP_008848320.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980805.1
COORDINATES: similar to AA sequence:RefSeq:WP_014865314.1
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: similar to AA sequence:RefSeq:WP_006076499.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015587.2
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015054165.1
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: similar to AA sequence:RefSeq:WP_006107841.1
COORDINATES: protein motif:HMM:NF012364.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
DNA polymerase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006825169.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825168.1
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006665643.1
COORDINATES: similar to AA sequence:RefSeq:WP_006064600.1
COORDINATES: similar to AA sequence:RefSeq:WP_006665645.1
COORDINATES: similar to AA sequence:RefSeq:WP_008416850.1
COORDINATES: similar to AA sequence:RefSeq:WP_004216131.1
GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
manganese-dependent inorganic pyrophosphatase
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: protein motif:HMM:NF013775.2
GO:0016310 - phosphorylation [Evidence IEA]
aminoglycoside phosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006665066.1
COORDINATES: protein motif:HMM:NF019643.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024953.2
COORDINATES: similar to AA sequence:RefSeq:WP_007981392.1
COORDINATES: similar to AA sequence:RefSeq:WP_008526420.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006883093.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pyridine nucleotide-disulfide oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008573223.1
COORDINATES: protein motif:HMM:NF016777.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005044102.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_014241100.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020650.2
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004594375.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388715.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008572927.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594383.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274258.1
GO:0003824 - catalytic activity [Evidence IEA]
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004061642.1
COORDINATES: similar to AA sequence:RefSeq:WP_009377704.1
COORDINATES: similar to AA sequence:RefSeq:WP_005046570.1
COORDINATES: similar to AA sequence:RefSeq:WP_005557438.1
COORDINATES: similar to AA sequence:RefSeq:WP_005536378.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983115.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968818.1
COORDINATES: similar to AA sequence:RefSeq:WP_020222811.1
COORDINATES: similar to AA sequence:RefSeq:WP_008612426.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971539.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009761224.1
COORDINATES: protein motif:HMM:NF037982.1
COORDINATES: similar to AA sequence:RefSeq:WP_008573971.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274249.1
COORDINATES: protein motif:HMM:NF014766.2
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: protein motif:HMM:NF024771.2
COORDINATES: similar to AA sequence:RefSeq:WP_007690423.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600031.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041116.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968481.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006055174.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693661.1
COORDINATES: similar to AA sequence:RefSeq:WP_004967976.1
COORDINATES: similar to AA sequence:RefSeq:WP_004967977.1
COORDINATES: similar to AA sequence:RefSeq:WP_012660239.1
COORDINATES: protein motif:HMM:NF014164.2
GO:0004177 - aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007983399.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983392.1
FAD-dependent tricarballylate dehydrogenase TcuA
COORDINATES: similar to AA sequence:RefSeq:WP_007997845.1
COORDINATES: similar to AA sequence:RefSeq:WP_005557212.1
GO:0042597 - periplasmic space [Evidence IEA]
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006165626.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_006433060.1
COORDINATES: similar to AA sequence:RefSeq:WP_020221213.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007980723.1
COORDINATES: protein motif:HMM:NF015905.2
COORDINATES: similar to AA sequence:RefSeq:WP_006087979.1
COORDINATES: similar to AA sequence:RefSeq:WP_005043213.1
GO:0015293 - symporter activity [Evidence IEA]
bile acid:sodium symporter family protein
COORDINATES: protein motif:HMM:NF016831.2
COORDINATES: similar to AA sequence:RefSeq:WP_020562273.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006078954.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979443.1
iron export ABC transporter permease subunit FetB
COORDINATES: similar to AA sequence:RefSeq:WP_005556327.1
phosphate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012659250.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007982026.1
COORDINATES: similar to AA sequence:RefSeq:WP_007743171.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652794.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979022.1
COORDINATES: similar to AA sequence:RefSeq:WP_006167690.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006672402.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005554209.1
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016032.2
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0042398 - cellular modified amino acid biosynthetic process [Evidence IEA]
glutamate-cysteine ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008427555.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
succinylglutamate desuccinylase/aspartoacylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011323844.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007982823.1
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF021287.2
COORDINATES: similar to AA sequence:RefSeq:WP_004051547.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_006054086.1
COORDINATES: similar to AA sequence:RefSeq:WP_009367468.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007739559.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
COORDINATES: protein motif:HMM:NF033480.1
bifunctional lysylphosphatidylglycerol flippase/synthetase MprF
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase domain-containing protein
COORDINATES: protein motif:HMM:NF036897.2
COORDINATES: similar to AA sequence:RefSeq:WP_007698033.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007188057.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097114.1
COORDINATES: similar to AA sequence:RefSeq:WP_007700536.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056420.1
COORDINATES: similar to AA sequence:RefSeq:WP_006650726.1
COORDINATES: protein motif:HMM:NF027245.2
COORDINATES: similar to AA sequence:RefSeq:WP_015789267.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983572.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981359.1
COORDINATES: protein motif:HMM:NF012355.2
GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
plastocyanin/azurin family copper-binding protein
COORDINATES: protein motif:HMM:NF025774.2
COORDINATES: similar to AA sequence:RefSeq:WP_008002433.1
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007741705.1
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006057134.1
COORDINATES: protein motif:HMM:TIGR04281.1
PGF-CTERM-anchored ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005042284.1
COORDINATES: similar to AA sequence:RefSeq:WP_006077727.1
pyridoxal phosphate-dependent class II aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014863781.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188744.1
NTP transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012807674.1
GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006056370.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: similar to AA sequence:RefSeq:WP_008423825.1
COORDINATES: similar to AA sequence:RefSeq:WP_006666019.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_007697006.1
COORDINATES: similar to AA sequence:RefSeq:WP_008893866.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008385720.1
COORDINATES: protein motif:HMM:NF019013.2
COORDINATES: protein motif:HMM:NF012371.2
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005557723.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004043088.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: similar to AA sequence:RefSeq:WP_006653024.1
COORDINATES: similar to AA sequence:RefSeq:WP_014050345.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004267093.1
COORDINATES: similar to AA sequence:RefSeq:WP_006092780.1
COORDINATES: similar to AA sequence:RefSeq:WP_016337462.1
COORDINATES: similar to AA sequence:RefSeq:WP_005553515.1
COORDINATES: similar to AA sequence:RefSeq:WP_009376720.1
COORDINATES: protein motif:HMM:TIGR01409.1
twin-arginine translocation signal domain-containing protein
COORDINATES: protein motif:HMM:NF015000.2
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015761836.1
COORDINATES: similar to AA sequence:RefSeq:WP_017342179.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006654472.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388736.1
COORDINATES: similar to AA sequence:RefSeq:WP_006076460.1
COORDINATES: similar to AA sequence:RefSeq:WP_006076459.1
COORDINATES: similar to AA sequence:RefSeq:WP_014051924.1
COORDINATES: similar to AA sequence:RefSeq:WP_006077703.1
COORDINATES: similar to AA sequence:RefSeq:WP_008163295.1
COORDINATES: similar to AA sequence:RefSeq:WP_009762257.1
COORDINATES: similar to AA sequence:RefSeq:WP_004043169.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971585.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011222528.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007692369.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981086.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981074.1
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: similar to AA sequence:RefSeq:WP_007983209.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02122.1
GO:0005215 - transporter activity [Evidence IEA]
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008456775.1
COORDINATES: similar to AA sequence:RefSeq:WP_008324676.1
COORDINATES: similar to AA sequence:RefSeq:WP_008413912.1
COORDINATES: similar to AA sequence:RefSeq:WP_008526469.1
COORDINATES: similar to AA sequence:RefSeq:WP_005042091.1
COORDINATES: similar to AA sequence:RefSeq:WP_005045061.1
GO:0005384 - manganese ion transmembrane transporter activity [Evidence IEA]
GO:0030026 - intracellular manganese ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007742178.1
COORDINATES: similar to AA sequence:RefSeq:WP_014047261.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:NF018743.2
COORDINATES: similar to AA sequence:RefSeq:WP_008422375.1
COORDINATES: similar to AA sequence:RefSeq:WP_007110876.1
COORDINATES: protein motif:HMM:NF024811.2
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015647.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009254 - peptidoglycan turnover [Evidence IEA]
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_007107553.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983406.1
COORDINATES: similar to AA sequence:RefSeq:WP_005043268.1
COORDINATES: protein motif:HMM:NF025006.2
carboxypeptidase-like regulatory domain-containing protein
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012517.2
COORDINATES: similar to AA sequence:RefSeq:WP_014030880.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: protein motif:HMM:NF013126.2
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013401110.1
COORDINATES: similar to AA sequence:RefSeq:WP_007187735.1
COORDINATES: similar to AA sequence:RefSeq:WP_004216596.1
COORDINATES: similar to AA sequence:RefSeq:WP_008442784.1
COORDINATES: similar to AA sequence:RefSeq:WP_005041547.1
COORDINATES: protein motif:HMM:NF001911.0
COORDINATES: similar to AA sequence:RefSeq:WP_013875715.1
COORDINATES: similar to AA sequence:RefSeq:WP_009366532.1
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_012876045.1
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_011564861.1
GO:0015833 - peptide transport [Evidence IEA]
energy-coupling factor transporter ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_005042617.1
COORDINATES: similar to AA sequence:RefSeq:WP_012807650.1
COORDINATES: similar to AA sequence:RefSeq:WP_006091284.1
COORDINATES: similar to AA sequence:RefSeq:WP_007741672.1
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006649622.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971358.1
COORDINATES: similar to AA sequence:RefSeq:WP_015320567.1
GO:0004803 - transposase activity [Evidence IEA]
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006166698.1
COORDINATES: similar to AA sequence:RefSeq:WP_004040813.1
COORDINATES: similar to AA sequence:RefSeq:WP_007276452.1
COORDINATES: protein motif:HMM:NF017534.2
COORDINATES: similar to AA sequence:RefSeq:WP_007691254.1
COORDINATES: similar to AA sequence:RefSeq:WP_008444080.1
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: similar to AA sequence:RefSeq:WP_006106715.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693900.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971711.1
COORDINATES: similar to AA sequence:RefSeq:WP_008006070.1
glycoside hydrolase family 2 TIM barrel-domain containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007997758.1
GO:0008869 - galactonate dehydratase activity [Evidence IEA]
GO:0009063 - amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007980986.1
COORDINATES: protein motif:HMM:NF016497.2
COORDINATES: similar to AA sequence:RefSeq:WP_006883424.1
COORDINATES: similar to AA sequence:RefSeq:WP_006885910.1
COORDINATES: similar to AA sequence:RefSeq:WP_004965897.1
COORDINATES: similar to AA sequence:RefSeq:WP_006076130.1
COORDINATES: similar to AA sequence:RefSeq:WP_008605610.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875727.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388648.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825628.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875708.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875709.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945507.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107109.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875713.1
COORDINATES: protein motif:HMM:NF021778.2
GO:0052689 - carboxylic ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006825643.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875714.1
COORDINATES: similar to AA sequence:RefSeq:WP_008006250.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041059.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667826.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968402.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968403.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097146.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013875732.1
COORDINATES: similar to AA sequence:RefSeq:WP_006671320.1
COORDINATES: similar to AA sequence:RefSeq:WP_006079344.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006600063.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041192.1
COORDINATES: similar to AA sequence:RefSeq:WP_007742054.1
COORDINATES: protein motif:HMM:NF018024.2
COORDINATES: protein motif:HMM:NF019949.2
COORDINATES: protein motif:HMM:NF015444.2
COORDINATES: similar to AA sequence:RefSeq:WP_006883289.1
COORDINATES: similar to AA sequence:RefSeq:WP_015735512.1
sugar phosphate isomerase/epimerase family protein
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_006667827.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945802.1
COORDINATES: similar to AA sequence:RefSeq:WP_008607002.1
carbohydrate-binding family 9-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_008386581.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667819.1
COORDINATES: protein motif:HMM:NF041083.2
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008326717.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572640.1
COORDINATES: similar to AA sequence:RefSeq:WP_009377481.1
COORDINATES: protein motif:HMM:NF013697.2
COORDINATES: similar to AA sequence:RefSeq:WP_008895667.1
COORDINATES: similar to AA sequence:RefSeq:WP_007690513.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004595762.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - DNA transposition [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013933.2
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006167778.1
COORDINATES: similar to AA sequence:RefSeq:WP_005044767.1
COORDINATES: similar to AA sequence:RefSeq:WP_007743091.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693770.1
COORDINATES: similar to AA sequence:RefSeq:WP_007743087.1
COORDINATES: similar to AA sequence:RefSeq:WP_008367839.1
COORDINATES: similar to AA sequence:RefSeq:WP_008002885.1
COORDINATES: protein motif:HMM:NF018178.2
COORDINATES: similar to AA sequence:RefSeq:WP_006089241.1
twin-arginine translocase TatA/TatE family subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004598962.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008575087.1
COORDINATES: similar to AA sequence:RefSeq:WP_015910146.1
COORDINATES: similar to AA sequence:RefSeq:WP_004062880.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008572767.1
COORDINATES: similar to AA sequence:RefSeq:WP_004047715.1
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: similar to AA sequence:RefSeq:WP_009377636.1
COORDINATES: similar to AA sequence:RefSeq:WP_014555843.1
COORDINATES: protein motif:HMM:NF014697.2
COORDINATES: similar to AA sequence:RefSeq:WP_006825641.1
COORDINATES: similar to AA sequence:RefSeq:WP_006432997.1
COORDINATES: similar to AA sequence:RefSeq:WP_006885927.1
COORDINATES: similar to AA sequence:RefSeq:WP_006885926.1
COORDINATES: similar to AA sequence:RefSeq:WP_006885925.1
GO:0071705 - nitrogen compound transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004971912.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971910.1
COORDINATES: protein motif:HMM:NF015400.2
saccharopine dehydrogenase NADP-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013228.2
COORDINATES: similar to AA sequence:RefSeq:WP_004214367.1
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: similar to AA sequence:RefSeq:WP_009367736.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009378117.1
COORDINATES: similar to AA sequence:RefSeq:WP_006078670.1
COORDINATES: similar to AA sequence:RefSeq:WP_011224151.1
COORDINATES: similar to AA sequence:RefSeq:WP_006183369.1
transcription initiation factor IIB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009367687.1
COORDINATES: similar to AA sequence:RefSeq:WP_008573309.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388880.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008313462.1
COORDINATES: similar to AA sequence:RefSeq:WP_008015356.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594499.1
COORDINATES: similar to AA sequence:RefSeq:WP_009367722.1
COORDINATES: similar to AA sequence:RefSeq:WP_006827358.1
COORDINATES: similar to AA sequence:RefSeq:WP_006186557.1
COORDINATES: similar to AA sequence:RefSeq:WP_006078606.1
COORDINATES: similar to AA sequence:RefSeq:WP_008319975.1
COORDINATES: similar to AA sequence:RefSeq:WP_004043375.1
ArdC-like ssDNA-binding domain-containing protein