Peromyscus leucopus breed LL Stock chromosome 8a, UCI_PerLeu_2.1, whole genome shotgun sequence.
type: Entry
definition: Peromyscus leucopus breed LL Stock chromosome 8a, UCI_PerLeu_2.1, whole genome shotgun sequence.
sequence version: NC_051085.1
sequence date: 2020-11-06
sequence: sequence
division: CON
label: NC_051085.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA533285
dblink: SAMN03488028
keyword: WGS
keyword: RefSeq
source: Peromyscus leucopus (white-footed mouse)
organism: Peromyscus leucopus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus.
reference: 1
references: 31355335
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM026063.1.\nAssembly name: UCI_PerLeu_2.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of California\nIrvine on 2020/10/02. The original whole-genome shotgun project has\nthe accession NMRJ00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of California Irvine\nAssembly Date :: 2020\nAssembly Method :: custom method described in paper v.\n 02/14/20\nAssembly Name :: UCI_PerLeu_2.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina; PacBio; HiC-Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Peromyscus leucopus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 58348646
topology: linear
so has quality: SO_0000987
location: 1..58348646
location: region:1-58348646:1
RO_0002162: 10041

NC_051085
type: RefSeq
SIO_000068: refseq

PRJNA533285
type: BioProject
SIO_000068: bioproject

SAMN03488028
type: BioSample
SIO_000068: biosample

1
title: The genome of Peromyscus leucopus, natural host for Lyme disease and other emerging infections
author: Long, A.D.
author: Baldwin-Brown, J.
author: Tao, Y.
author: Cook, V.J.
author: Balderrama-Gutierrez, G.
author: Corbett-Detig, R.
author: Mortazavi, A.
author: Barbour, A.G.
journal: Sci Adv 5 (7), eaaw6441 (2019)
pubmed: 31355335
comments: Publication Status: Online-Only

31355335
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58348646:1
position: 58348646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-58348646:1:source
so part of: sequence
organism: Peromyscus leucopus
mol type: genomic DNA
chromosome: 8a
sex: female
tissue type: mixed organs
dev stage: adult
breed: LL Stock

10041
type: Taxonomy
SIO_000068: taxonomy

LOC114688991
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114688991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(68699..69687)
location: region:68699-69687:-1
so has part: feature:68699-69687:-1:exon
subclass of: SO_0000010

114688991
type: Gene
SIO_000068: ncbigene

position:68699:-1
position: 68699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69687:-1
position: 69687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68699-69687:-1:exon

LOC114688991
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114688991
product: transmembrane protein 41B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037200412.1
SIO_010081: LOC114688991
subclass of: SO_0000673
so part of: LOC114688991
location: complement(68699..69687)
location: region:68699-69687:-1
so has part: feature:68699-69687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68699-69687:-1:exon

LOC114688991
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114688991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 41B-like
translation: MAKGRVAERTQTGPLHSTPAGDPATGTRVSTTPGSRDHLKDKPCAEAGSARMSLLILVSIFLCAAFVMFLVYKNFAQLSEEERANMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYNFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVSLKVFFIGTFLGVAPPSFVAIKAGTTLYQLTTAGKLFPGTQYLF
SIO_010081: LOC114688991
subclass of: SO_0000673
so part of: LOC114688991
location: complement(68746..69552)
location: region:68746-69552:-1
so has part: feature:68746-69552:-1:exon

XP_037056307.1
type: Protein
SIO_000068: ncbiprotein

position:68746:-1
position: 68746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69552:-1
position: 69552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68746-69552:-1:exon

LOC114688386
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114688386
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(103565..104400)
location: region:103565-104400:-1
so has part: feature:103565-104400:-1:exon

114688386
type: Gene
SIO_000068: ncbigene

position:103565:-1
position: 103565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104400:-1
position: 104400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103565-104400:-1:exon

LOC114688386
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114688386
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114688386
subclass of: SO_0000673
so part of: LOC114688386
location: complement(103565..104400)
location: region:103565-104400:-1
so has part: feature:103565-104400:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103565-104400:-1:exon

LOC114688387
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114688387
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 158828..158999
location: region:158828-158999:1
so has part: feature:158828-158999:1:exon

114688387
type: Gene
SIO_000068: ncbigene

position:158828:1
position: 158828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158999:1
position: 158999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158828-158999:1:exon

LOC114688387
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114688387
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC114688387
subclass of: SO_0000673
so part of: LOC114688387
location: 158828..158999
location: region:158828-158999:1
so has part: feature:158828-158999:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:158828-158999:1:exon

Sim1
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Sim1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 512630..592618
location: region:512630-592618:1
so has part: feature:512630-592618:1:exon
subclass of: SO_0000010

114685629
type: Gene
SIO_000068: ncbigene

position:512630:1
position: 512630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592618:1
position: 592618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512630-592618:1:exon

Sim1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Sim1
product: SIM bHLH transcription factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_028860263.2
SIO_010081: Sim1
subclass of: SO_0000673
so part of: Sim1
location: join(512630..512878,513361..513970,522879..522961,525996..526085,526549..526657,526793..526878,527417..527616,527804..527910,528550..528697,558759..558927,584428..584827,586932..592618)
location: region:512630-592618:1
so has part: feature:512630-512878:1:exon
so has part: feature:513361-513970:1:exon
so has part: feature:522879-522961:1:exon
so has part: feature:525996-526085:1:exon
so has part: feature:526549-526657:1:exon
so has part: feature:526793-526878:1:exon
so has part: feature:527417-527616:1:exon
so has part: feature:527804-527910:1:exon
so has part: feature:528550-528697:1:exon
so has part: feature:558759-558927:1:exon
so has part: feature:584428-584827:1:exon
so has part: feature:586932-592618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512630-512878:1:exon

position:512878:1
position: 512878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:513361-513970:1:exon

position:513361:1
position: 513361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513970:1
position: 513970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:522879-522961:1:exon

position:522879:1
position: 522879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522961:1
position: 522961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:525996-526085:1:exon

position:525996:1
position: 525996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526085:1
position: 526085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:526549-526657:1:exon

position:526549:1
position: 526549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526657:1
position: 526657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:526793-526878:1:exon

position:526793:1
position: 526793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526878:1
position: 526878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:527417-527616:1:exon

position:527417:1
position: 527417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527616:1
position: 527616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:527804-527910:1:exon

position:527804:1
position: 527804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527910:1
position: 527910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:528550-528697:1:exon

position:528550:1
position: 528550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528697:1
position: 528697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:558759-558927:1:exon

position:558759:1
position: 558759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558927:1
position: 558927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:584428-584827:1:exon

position:584428:1
position: 584428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584827:1
position: 584827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:586932-592618:1:exon

position:586932:1
position: 586932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sim1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Sim1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: single-minded homolog 1
translation: MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGLGEAWGHTSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGYKVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPTFSYTSSSTPTITDNRKGAKSRLSSAKSKSRTSPYPQYSGFHTERSESDHDSQWGGSPLTDTASPQLLDAERPVSQHEVSCAYRQFPDRSSLCYGFALDHSRLVDDRHFHTQACEGGRCEAGRYFLGAPPTGRDPWWGSRAALPLTKVSPESRETYENSMPHITSVHRIHGRGHWDEDSVVSSPDPGSASESGDRYRTEQYQNSPHEPSKIETLIRATQQMIKEEENRLQLRKAPPDQLVSINGAGKKHSICFANYQQAPPAGEVCHSSALASTSPCDHVQQREGKMLSPHDNDYDNSPTALSRISSPSSDRITKSSLILAKDYLHSDMSPHQTTGEHPAISPNCFGSHRQYFDKHAYTLTGYALEHLYDSETIRNYSLGCNGSHFDVTSHLRMQPDPAQGHKGTSVIITNGS
SIO_010081: Sim1
subclass of: SO_0000673
so part of: Sim1
location: join(513796..513970,522879..522961,525996..526085,526549..526657,526793..526878,527417..527616,527804..527910,528550..528697,558759..558927,584428..584827,586932..587662)
location: region:513796-587662:1
so has part: feature:513796-513970:1:exon
so has part: feature:522879-522961:1:exon
so has part: feature:525996-526085:1:exon
so has part: feature:526549-526657:1:exon
so has part: feature:526793-526878:1:exon
so has part: feature:527417-527616:1:exon
so has part: feature:527804-527910:1:exon
so has part: feature:528550-528697:1:exon
so has part: feature:558759-558927:1:exon
so has part: feature:584428-584827:1:exon
so has part: feature:586932-587662:1:exon

XP_028716096.1
type: Protein
SIO_000068: ncbiprotein

position:513796:1
position: 513796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587662:1
position: 587662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513796-513970:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:522879-522961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525996-526085:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526549-526657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526793-526878:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527417-527616:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:527804-527910:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:528550-528697:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:558759-558927:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:584428-584827:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:586932-587662:1:exon

LOC114685630
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685630
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 751530..751632
location: region:751530-751632:1
so has part: feature:751530-751632:1:exon
subclass of: SO_0000623

114685630
type: Gene
SIO_000068: ncbigene

position:751530:1
position: 751530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751632:1
position: 751632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751530-751632:1:exon

LOC114685630
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: snRNA
gene: LOC114685630
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003733480.1
SIO_010081: LOC114685630
subclass of: SO_0000673
so part of: LOC114685630
location: 751530..751632
location: region:751530-751632:1
so has part: feature:751530-751632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:751530-751632:1:exon

LOC114684579
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114684579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1096717..1098251
location: region:1096717-1098251:1
so has part: feature:1096717-1098251:1:exon
subclass of: SO_0000010

114684579
type: Gene
SIO_000068: ncbigene

position:1096717:1
position: 1096717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1098251:1
position: 1098251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1096717-1098251:1:exon

LOC114684579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114684579
product: 26S proteasome regulatory subunit 4-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037200388.1
SIO_010081: LOC114684579
subclass of: SO_0000673
so part of: LOC114684579
location: 1096717..1098251
location: region:1096717-1098251:1
so has part: feature:1096717-1098251:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1096717-1098251:1:exon

LOC114684579
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114684579
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 26S proteasome regulatory subunit 4-like
translation: MGQSQSGGHGPGGGKKDDKDKKKKYEPPVSTRVGKRKKKTKGPDAASKLLLVTPHTQCRLKLLKXRIKDYLLMEKEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVRILSFVDKDLLKSGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLGNQIQEIKESVELPLTHPEYYEEMEIKPPKGVILYGPPGTGKTLLAKAVANQTSTTFLRVVGSELIQKYLGDAPKLFRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLTDDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL
SIO_010081: LOC114684579
subclass of: SO_0000673
so part of: LOC114684579
location: 1096717..1098036
location: region:1096717-1098036:1
so has part: feature:1096717-1098036:1:exon

XP_037056283.1
type: Protein
SIO_000068: ncbiprotein

position:1098036:1
position: 1098036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1096717-1098036:1:exon

LOC114684578
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114684578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1344810..1350041
location: region:1344810-1350041:1
so has part: feature:1344810-1350041:1:exon

114684578
type: Gene
SIO_000068: ncbigene

position:1344810:1
position: 1344810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350041:1
position: 1350041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344810-1350041:1:exon

LOC114684578
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114684578
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC114684578
subclass of: SO_0000673
so part of: LOC114684578
location: 1344810..1344859
location: region:1344810-1344859:1
so has part: feature:1344810-1344859:1:exon

position:1344859:1
position: 1344859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344810-1344859:1:exon

LOC114684578
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114684578
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC114684578
subclass of: SO_0000673
so part of: LOC114684578
location: 1349127..1350041
location: region:1349127-1350041:1
so has part: feature:1349127-1350041:1:exon

position:1349127:1
position: 1349127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1349127-1350041:1:exon

LOC114710507
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114710507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2044401..2044835)
location: region:2044401-2044835:-1
so has part: feature:2044401-2044835:-1:exon

114710507
type: Gene
SIO_000068: ncbigene

position:2044401:-1
position: 2044401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2044835:-1
position: 2044835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2044401-2044835:-1:exon

LOC114710507
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114710507
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114710507
subclass of: SO_0000673
so part of: LOC114710507
location: complement(2044401..2044835)
location: region:2044401-2044835:-1
so has part: feature:2044401-2044835:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2044401-2044835:-1:exon

LOC119086874
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119086874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2182525..2197738
location: region:2182525-2197738:1
so has part: feature:2182525-2197738:1:exon
subclass of: SO_0000011

119086874
type: Gene
SIO_000068: ncbigene

position:2182525:1
position: 2182525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2197738:1
position: 2197738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2182525-2197738:1:exon

LOC119086874
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119086874
product: uncharacterized LOC119086874
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005090259.1
SIO_010081: LOC119086874
subclass of: SO_0000673
so part of: LOC119086874
location: join(2182525..2182567,2185652..2185752,2186189..2186255,2188309..2188438,2196992..2197738)
location: region:2182525-2197738:1
so has part: feature:2182525-2182567:1:exon
so has part: feature:2185652-2185752:1:exon
so has part: feature:2186189-2186255:1:exon
so has part: feature:2188309-2188438:1:exon
so has part: feature:2196992-2197738:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2182525-2182567:1:exon

position:2182567:1
position: 2182567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2185652-2185752:1:exon

position:2185652:1
position: 2185652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2185752:1
position: 2185752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2186189-2186255:1:exon

position:2186189:1
position: 2186189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2186255:1
position: 2186255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2188309-2188438:1:exon

position:2188309:1
position: 2188309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2188438:1
position: 2188438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2196992-2197738:1:exon

position:2196992:1
position: 2196992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114710502
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114710502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2219665..2220010
location: region:2219665-2220010:1
so has part: feature:2219665-2220010:1:exon

114710502
type: Gene
SIO_000068: ncbigene

position:2219665:1
position: 2219665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2220010:1
position: 2220010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2219665-2220010:1:exon

LOC114710502
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114710502
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC114710502
subclass of: SO_0000673
so part of: LOC114710502
location: 2219665..2220010
location: region:2219665-2220010:1
so has part: feature:2219665-2220010:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2219665-2220010:1:exon

LOC114710509
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114710509
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2310459..2310618
location: region:2310459-2310618:1
so has part: feature:2310459-2310618:1:exon
subclass of: SO_0000623

114710509
type: Gene
SIO_000068: ncbigene

position:2310459:1
position: 2310459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2310618:1
position: 2310618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2310459-2310618:1:exon

LOC114710509
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: snRNA
gene: LOC114710509
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003737066.1
SIO_010081: LOC114710509
subclass of: SO_0000673
so part of: LOC114710509
location: 2310459..2310618
location: region:2310459-2310618:1
so has part: feature:2310459-2310618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2310459-2310618:1:exon

LOC114710508
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114710508
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2431963..2432126)
location: region:2431963-2432126:-1
so has part: feature:2431963-2432126:-1:exon
subclass of: SO_0000623

114710508
type: Gene
SIO_000068: ncbigene

position:2431963:-1
position: 2431963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2432126:-1
position: 2432126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2431963-2432126:-1:exon

LOC114710508
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: snRNA
gene: LOC114710508
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003737065.1
SIO_010081: LOC114710508
subclass of: SO_0000673
so part of: LOC114710508
location: complement(2431963..2432126)
location: region:2431963-2432126:-1
so has part: feature:2431963-2432126:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2431963-2432126:-1:exon

LOC114710504
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114710504
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2596676..2598088)
location: region:2596676-2598088:-1
so has part: feature:2596676-2598088:-1:exon

114710504
type: Gene
SIO_000068: ncbigene

position:2596676:-1
position: 2596676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2598088:-1
position: 2598088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2596676-2598088:-1:exon

LOC114710504
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114710504
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114710504
subclass of: SO_0000673
so part of: LOC114710504
location: complement(2596676..2598088)
location: region:2596676-2598088:-1
so has part: feature:2596676-2598088:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2596676-2598088:-1:exon

LOC114710505
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114710505
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3247072..3260544)
location: region:3247072-3260544:-1
so has part: feature:3247072-3260544:-1:exon

114710505
type: Gene
SIO_000068: ncbigene

position:3247072:-1
position: 3247072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3260544:-1
position: 3260544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3247072-3260544:-1:exon

LOC114710505
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114710505
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC114710505
subclass of: SO_0000673
so part of: LOC114710505
location: complement(3247072..3248112)
location: region:3247072-3248112:-1
so has part: feature:3247072-3248112:-1:exon

position:3248112:-1
position: 3248112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3247072-3248112:-1:exon

LOC114710505
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114710505
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC114710505
subclass of: SO_0000673
so part of: LOC114710505
location: complement(3259144..3260544)
location: region:3259144-3260544:-1
so has part: feature:3259144-3260544:-1:exon

position:3259144:-1
position: 3259144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3259144-3260544:-1:exon

Hace1
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Hace1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3299863..3414827)
location: region:3299863-3414827:-1
so has part: feature:3299863-3414827:-1:exon
subclass of: SO_0000010

114710506
type: Gene
SIO_000068: ncbigene

position:3299863:-1
position: 3299863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3414827:-1
position: 3414827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3299863-3414827:-1:exon

Hace1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Hace1
product: HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_028894680.2
SIO_010081: Hace1
subclass of: SO_0000673
so part of: Hace1
location: complement(join(3299863..3300701,3302096..3302209,3313108..3313178,3313453..3313551,3319802..3319933,3329992..3330188,3330670..3330819,3334548..3334635,3334843..3334940,3335037..3335148,3341034..3341121,3341332..3341400,3341866..3342200,3349834..3349984,3353110..3353216,3354162..3354263,3354429..3354525,3359090..3359172,3384951..3385082,3393474..3393549,3403278..3403382,3404059..3404148,3404544..3404598,3414482..3414827))
location: region:3299863-3414827:-1
so has part: feature:3414482-3414827:-1:exon
so has part: feature:3404544-3404598:-1:exon
so has part: feature:3404059-3404148:-1:exon
so has part: feature:3403278-3403382:-1:exon
so has part: feature:3393474-3393549:-1:exon
so has part: feature:3384951-3385082:-1:exon
so has part: feature:3359090-3359172:-1:exon
so has part: feature:3354429-3354525:-1:exon
so has part: feature:3354162-3354263:-1:exon
so has part: feature:3353110-3353216:-1:exon
so has part: feature:3349834-3349984:-1:exon
so has part: feature:3341866-3342200:-1:exon
so has part: feature:3341332-3341400:-1:exon
so has part: feature:3341034-3341121:-1:exon
so has part: feature:3335037-3335148:-1:exon
so has part: feature:3334843-3334940:-1:exon
so has part: feature:3334548-3334635:-1:exon
so has part: feature:3330670-3330819:-1:exon
so has part: feature:3329992-3330188:-1:exon
so has part: feature:3319802-3319933:-1:exon
so has part: feature:3313453-3313551:-1:exon
so has part: feature:3313108-3313178:-1:exon
so has part: feature:3302096-3302209:-1:exon
so has part: feature:3299863-3300701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3414482-3414827:-1:exon

position:3414482:-1
position: 3414482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3404544-3404598:-1:exon

position:3404544:-1
position: 3404544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3404598:-1
position: 3404598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3404059-3404148:-1:exon

position:3404059:-1
position: 3404059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3404148:-1
position: 3404148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3403278-3403382:-1:exon

position:3403278:-1
position: 3403278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3403382:-1
position: 3403382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3393474-3393549:-1:exon

position:3393474:-1
position: 3393474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3393549:-1
position: 3393549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3384951-3385082:-1:exon

position:3384951:-1
position: 3384951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3385082:-1
position: 3385082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3359090-3359172:-1:exon

position:3359090:-1
position: 3359090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3359172:-1
position: 3359172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3354429-3354525:-1:exon

position:3354429:-1
position: 3354429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3354525:-1
position: 3354525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3354162-3354263:-1:exon

position:3354162:-1
position: 3354162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3354263:-1
position: 3354263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3353110-3353216:-1:exon

position:3353110:-1
position: 3353110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3353216:-1
position: 3353216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3349834-3349984:-1:exon

position:3349834:-1
position: 3349834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3349984:-1
position: 3349984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3341866-3342200:-1:exon

position:3341866:-1
position: 3341866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3342200:-1
position: 3342200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3341332-3341400:-1:exon

position:3341332:-1
position: 3341332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3341400:-1
position: 3341400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3341034-3341121:-1:exon

position:3341034:-1
position: 3341034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3341121:-1
position: 3341121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3335037-3335148:-1:exon

position:3335037:-1
position: 3335037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3335148:-1
position: 3335148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3334843-3334940:-1:exon

position:3334843:-1
position: 3334843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3334940:-1
position: 3334940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3334548-3334635:-1:exon

position:3334548:-1
position: 3334548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3334635:-1
position: 3334635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3330670-3330819:-1:exon

position:3330670:-1
position: 3330670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3330819:-1
position: 3330819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3329992-3330188:-1:exon

position:3329992:-1
position: 3329992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3330188:-1
position: 3330188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3319802-3319933:-1:exon

position:3319802:-1
position: 3319802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3319933:-1
position: 3319933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3313453-3313551:-1:exon

position:3313453:-1
position: 3313453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3313551:-1
position: 3313551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3313108-3313178:-1:exon

position:3313108:-1
position: 3313108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3313178:-1
position: 3313178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3302096-3302209:-1:exon

position:3302096:-1
position: 3302096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3302209:-1
position: 3302209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3299863-3300701:-1:exon

position:3300701:-1
position: 3300701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hace1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Hace1
product: HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_037200376.1
SIO_010081: Hace1
subclass of: SO_0000673
so part of: Hace1
location: complement(join(3299863..3300701,3302096..3302209,3313108..3313178,3313453..3313551,3319802..3319933,3329992..3330188,3330670..3330819,3334548..3334635,3334843..3334940,3335037..3335148,3341034..3341121,3341332..3341400,3341866..3342200,3349834..3349984,3353110..3353216,3354162..3354263,3354429..3354525,3359090..3359172,3393474..3393549,3403278..3403382,3404059..3404148,3404544..3404598,3414482..3414792))
location: region:3299863-3414792:-1
so has part: feature:3414482-3414792:-1:exon
so has part: feature:3404544-3404598:-1:exon
so has part: feature:3404059-3404148:-1:exon
so has part: feature:3403278-3403382:-1:exon
so has part: feature:3393474-3393549:-1:exon
so has part: feature:3359090-3359172:-1:exon
so has part: feature:3354429-3354525:-1:exon
so has part: feature:3354162-3354263:-1:exon
so has part: feature:3353110-3353216:-1:exon
so has part: feature:3349834-3349984:-1:exon
so has part: feature:3341866-3342200:-1:exon
so has part: feature:3341332-3341400:-1:exon
so has part: feature:3341034-3341121:-1:exon
so has part: feature:3335037-3335148:-1:exon
so has part: feature:3334843-3334940:-1:exon
so has part: feature:3334548-3334635:-1:exon
so has part: feature:3330670-3330819:-1:exon
so has part: feature:3329992-3330188:-1:exon
so has part: feature:3319802-3319933:-1:exon
so has part: feature:3313453-3313551:-1:exon
so has part: feature:3313108-3313178:-1:exon
so has part: feature:3302096-3302209:-1:exon
so has part: feature:3299863-3300701:-1:exon

position:3414792:-1
position: 3414792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3414482-3414792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3404544-3404598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3404059-3404148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3403278-3403382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3393474-3393549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359090-3359172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3354429-3354525:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3354162-3354263:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3353110-3353216:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3349834-3349984:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3341866-3342200:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3341332-3341400:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3341034-3341121:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3335037-3335148:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3334843-3334940:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3334548-3334635:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3330670-3330819:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3329992-3330188:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3319802-3319933:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3313453-3313551:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3313108-3313178:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3302096-3302209:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3299863-3300701:-1:exon

Hace1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Hace1
product: HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_028894681.2
SIO_010081: Hace1
subclass of: SO_0000673
so part of: Hace1
location: complement(join(3299970..3300701,3302096..3302209,3313108..3313178,3313453..3313551,3329992..3330188,3330670..3330819,3334548..3334635,3334843..3334940,3335037..3335148,3341034..3341121,3341332..3341400,3341866..3342200,3349834..3349984,3353110..3353216,3354162..3354263,3354429..3354525,3359090..3359172,3384951..3385082,3393474..3393549,3403278..3403382,3404059..3404148,3404544..3404598,3414482..3414793))
location: region:3299970-3414793:-1
so has part: feature:3414482-3414793:-1:exon
so has part: feature:3404544-3404598:-1:exon
so has part: feature:3404059-3404148:-1:exon
so has part: feature:3403278-3403382:-1:exon
so has part: feature:3393474-3393549:-1:exon
so has part: feature:3384951-3385082:-1:exon
so has part: feature:3359090-3359172:-1:exon
so has part: feature:3354429-3354525:-1:exon
so has part: feature:3354162-3354263:-1:exon
so has part: feature:3353110-3353216:-1:exon
so has part: feature:3349834-3349984:-1:exon
so has part: feature:3341866-3342200:-1:exon
so has part: feature:3341332-3341400:-1:exon
so has part: feature:3341034-3341121:-1:exon
so has part: feature:3335037-3335148:-1:exon
so has part: feature:3334843-3334940:-1:exon
so has part: feature:3334548-3334635:-1:exon
so has part: feature:3330670-3330819:-1:exon
so has part: feature:3329992-3330188:-1:exon
so has part: feature:3313453-3313551:-1:exon
so has part: feature:3313108-3313178:-1:exon
so has part: feature:3302096-3302209:-1:exon
so has part: feature:3299970-3300701:-1:exon

position:3299970:-1
position: 3299970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3414793:-1
position: 3414793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3414482-3414793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3404544-3404598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3404059-3404148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3403278-3403382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3393474-3393549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3384951-3385082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3359090-3359172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3354429-3354525:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3354162-3354263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3353110-3353216:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3349834-3349984:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3341866-3342200:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3341332-3341400:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3341034-3341121:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3335037-3335148:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3334843-3334940:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3334548-3334635:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3330670-3330819:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3329992-3330188:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3313453-3313551:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3313108-3313178:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3302096-3302209:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3299970-3300701:-1:exon

Hace1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Hace1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase HACE1 isoform X2
translation: MERAMEQLNRLTRSLRRARTVELPEDNETAVYTLMPMVMADQHRSVSELLSNSKFDVNYAFGRVKRSLLHIAANCGSVECLVLLLKKGANPNYQDISGCTPLHLAARNGQKKCMSKLLEYSADVNICNNEGLTATVQCLLDSGADINRPNVSGATPLYFACSHGQRDTAQILLLRGAKYLPDKNGVTPLDLCVQGGYGETCEVLIQHHPRLFQTIVQMTQNEDLRENMLRQVLEHLSQQSESQYLKILTSLAEVATTNGHKLLSLSSNYDAQMKSLLRIVRIFCHVFRIGPSSPSNGIDMGYNGNKTPRSQVFKPLELLWHSLDEWLVLIATELMKNKKDSADITSILLRQKGQDAGAASVSPFEPSGPGSCGSPSTGAGESTGDALAGSQEASADGQDVVAMTANRLSAVIQAFYMCCSCQMPPGMTSPRFIEFVCKHDEVLKCFVNRNPKIIFDHFHFLLECPELMSRFMHIIKAQPFKDRCEWFYEHLHSGQPDSDMVHRPVNENDILLVHRDSIFRSSCEIVSKADCAKLKQGIAVRFHGEEGMGQGVVREWFDILSNEIVNPDYALFTQSADGTTFQPNSNSYVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDNDISDLGLELTFSVETDVFGAMEEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGYTMA
SIO_010081: Hace1
subclass of: SO_0000673
so part of: Hace1
location: complement(join(3300599..3300701,3302096..3302209,3313108..3313178,3313453..3313551,3319802..3319933,3329992..3330188,3330670..3330819,3334548..3334635,3334843..3334940,3335037..3335148,3341034..3341121,3341332..3341400,3341866..3342200,3349834..3349984,3353110..3353216,3354162..3354263,3354429..3354525,3359090..3359172,3393474..3393549,3403278..3403382,3404059..3404148,3404544..3404598,3414482..3414557))
location: region:3300599-3414557:-1
so has part: feature:3414482-3414557:-1:exon
so has part: feature:3404544-3404598:-1:exon
so has part: feature:3404059-3404148:-1:exon
so has part: feature:3403278-3403382:-1:exon
so has part: feature:3393474-3393549:-1:exon
so has part: feature:3359090-3359172:-1:exon
so has part: feature:3354429-3354525:-1:exon
so has part: feature:3354162-3354263:-1:exon
so has part: feature:3353110-3353216:-1:exon
so has part: feature:3349834-3349984:-1:exon
so has part: feature:3341866-3342200:-1:exon
so has part: feature:3341332-3341400:-1:exon
so has part: feature:3341034-3341121:-1:exon
so has part: feature:3335037-3335148:-1:exon
so has part: feature:3334843-3334940:-1:exon
so has part: feature:3334548-3334635:-1:exon
so has part: feature:3330670-3330819:-1:exon
so has part: feature:3329992-3330188:-1:exon
so has part: feature:3319802-3319933:-1:exon
so has part: feature:3313453-3313551:-1:exon
so has part: feature:3313108-3313178:-1:exon
so has part: feature:3302096-3302209:-1:exon
so has part: feature:3300599-3300701:-1:exon

XP_037056271.1
type: Protein
SIO_000068: ncbiprotein

position:3300599:-1
position: 3300599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3414557:-1
position: 3414557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3414482-3414557:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3404544-3404598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3404059-3404148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3403278-3403382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3393474-3393549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359090-3359172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3354429-3354525:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3354162-3354263:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3353110-3353216:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3349834-3349984:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3341866-3342200:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3341332-3341400:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3341034-3341121:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3335037-3335148:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3334843-3334940:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3334548-3334635:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3330670-3330819:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3329992-3330188:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3319802-3319933:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3313453-3313551:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3313108-3313178:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3302096-3302209:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3300599-3300701:-1:exon

Hace1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Hace1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase HACE1 isoform X3
translation: MERAMEQLNRLTRSLRRARTVELPEDNETAVYTLMPMVMADQHRSVSELLSNSKFDVNYAFGRVKRSLLHIAANCGSVECLVLLLKKGANPNYQDISGCTPLHLAARNGQKKCMSKLLEYSADVNICNNEGLTAIHWLAVNGRTELLHDLVQHVSDVDVEDAMGQTALHVACQNGHKTTVQCLLDSGADINRPNVSGATPLYFACSHGQRDTAQILLLRGAKYLPDKNGVTPLDLCVQGGYGETCEVLIQHHPRLFQTIVQMTQNEDLRENMLRQVLEHLSQQSESQYLKILTSLAEVATTNGHKLLSLSSNYDAQMKSLLRIVRIFCHVFRIGPSSPSNGIDMGYNGNKTPRSQVFKPLELLWHSLDEWLVLIATELMKNKKDSADITSILLRQKGQDAGAASVSPFEPSGPGSCGSPSTGAGESTGDALAGSQEASADGQDVVAMTANRLSAVIQAFYMCCSCQMPPGMTSPRFIEFVCKHDEVLKCFVNRNPKIIFDHFHFLLECPELMSRFMHIIKAQPFKDRCEWFYEHLHSGQPDSDMVHRPVNENDILLVHRDSIFRSSCEIVSKADCAKLKQGIAVRFHGEEGMGQGVVREWFDILSNEIVNPDYALFTQSADGTTFQPNSNSYVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDNDISDLGLELTFSVETDVFGAMEEVPLKPGGGSILVTQNNKELLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGYTMA
SIO_010081: Hace1
subclass of: SO_0000673
so part of: Hace1
location: complement(join(3300599..3300701,3302096..3302209,3313108..3313178,3313453..3313551,3329992..3330188,3330670..3330819,3334548..3334635,3334843..3334940,3335037..3335148,3341034..3341121,3341332..3341400,3341866..3342200,3349834..3349984,3353110..3353216,3354162..3354263,3354429..3354525,3359090..3359172,3384951..3385082,3393474..3393549,3403278..3403382,3404059..3404148,3404544..3404598,3414482..3414557))
location: region:3300599-3414557:-1
so has part: feature:3414482-3414557:-1:exon
so has part: feature:3404544-3404598:-1:exon
so has part: feature:3404059-3404148:-1:exon
so has part: feature:3403278-3403382:-1:exon
so has part: feature:3393474-3393549:-1:exon
so has part: feature:3384951-3385082:-1:exon
so has part: feature:3359090-3359172:-1:exon
so has part: feature:3354429-3354525:-1:exon
so has part: feature:3354162-3354263:-1:exon
so has part: feature:3353110-3353216:-1:exon
so has part: feature:3349834-3349984:-1:exon
so has part: feature:3341866-3342200:-1:exon
so has part: feature:3341332-3341400:-1:exon
so has part: feature:3341034-3341121:-1:exon
so has part: feature:3335037-3335148:-1:exon
so has part: feature:3334843-3334940:-1:exon
so has part: feature:3334548-3334635:-1:exon
so has part: feature:3330670-3330819:-1:exon
so has part: feature:3329992-3330188:-1:exon
so has part: feature:3313453-3313551:-1:exon
so has part: feature:3313108-3313178:-1:exon
so has part: feature:3302096-3302209:-1:exon
so has part: feature:3300599-3300701:-1:exon

XP_028750514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3414482-3414557:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3404544-3404598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3404059-3404148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3403278-3403382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3393474-3393549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3384951-3385082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3359090-3359172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3354429-3354525:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3354162-3354263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3353110-3353216:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3349834-3349984:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3341866-3342200:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3341332-3341400:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3341034-3341121:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3335037-3335148:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3334843-3334940:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3334548-3334635:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3330670-3330819:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3329992-3330188:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3313453-3313551:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3313108-3313178:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3302096-3302209:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3300599-3300701:-1:exon

Hace1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Hace1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase HACE1 isoform X1
translation: MERAMEQLNRLTRSLRRARTVELPEDNETAVYTLMPMVMADQHRSVSELLSNSKFDVNYAFGRVKRSLLHIAANCGSVECLVLLLKKGANPNYQDISGCTPLHLAARNGQKKCMSKLLEYSADVNICNNEGLTAIHWLAVNGRTELLHDLVQHVSDVDVEDAMGQTALHVACQNGHKTTVQCLLDSGADINRPNVSGATPLYFACSHGQRDTAQILLLRGAKYLPDKNGVTPLDLCVQGGYGETCEVLIQHHPRLFQTIVQMTQNEDLRENMLRQVLEHLSQQSESQYLKILTSLAEVATTNGHKLLSLSSNYDAQMKSLLRIVRIFCHVFRIGPSSPSNGIDMGYNGNKTPRSQVFKPLELLWHSLDEWLVLIATELMKNKKDSADITSILLRQKGQDAGAASVSPFEPSGPGSCGSPSTGAGESTGDALAGSQEASADGQDVVAMTANRLSAVIQAFYMCCSCQMPPGMTSPRFIEFVCKHDEVLKCFVNRNPKIIFDHFHFLLECPELMSRFMHIIKAQPFKDRCEWFYEHLHSGQPDSDMVHRPVNENDILLVHRDSIFRSSCEIVSKADCAKLKQGIAVRFHGEEGMGQGVVREWFDILSNEIVNPDYALFTQSADGTTFQPNSNSYVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDNDISDLGLELTFSVETDVFGAMEEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGYTMA
SIO_010081: Hace1
subclass of: SO_0000673
so part of: Hace1
location: complement(join(3300599..3300701,3302096..3302209,3313108..3313178,3313453..3313551,3319802..3319933,3329992..3330188,3330670..3330819,3334548..3334635,3334843..3334940,3335037..3335148,3341034..3341121,3341332..3341400,3341866..3342200,3349834..3349984,3353110..3353216,3354162..3354263,3354429..3354525,3359090..3359172,3384951..3385082,3393474..3393549,3403278..3403382,3404059..3404148,3404544..3404598,3414482..3414557))
location: region:3300599-3414557:-1
so has part: feature:3414482-3414557:-1:exon
so has part: feature:3404544-3404598:-1:exon
so has part: feature:3404059-3404148:-1:exon
so has part: feature:3403278-3403382:-1:exon
so has part: feature:3393474-3393549:-1:exon
so has part: feature:3384951-3385082:-1:exon
so has part: feature:3359090-3359172:-1:exon
so has part: feature:3354429-3354525:-1:exon
so has part: feature:3354162-3354263:-1:exon
so has part: feature:3353110-3353216:-1:exon
so has part: feature:3349834-3349984:-1:exon
so has part: feature:3341866-3342200:-1:exon
so has part: feature:3341332-3341400:-1:exon
so has part: feature:3341034-3341121:-1:exon
so has part: feature:3335037-3335148:-1:exon
so has part: feature:3334843-3334940:-1:exon
so has part: feature:3334548-3334635:-1:exon
so has part: feature:3330670-3330819:-1:exon
so has part: feature:3329992-3330188:-1:exon
so has part: feature:3319802-3319933:-1:exon
so has part: feature:3313453-3313551:-1:exon
so has part: feature:3313108-3313178:-1:exon
so has part: feature:3302096-3302209:-1:exon
so has part: feature:3300599-3300701:-1:exon

XP_028750513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3414482-3414557:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3404544-3404598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3404059-3404148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3403278-3403382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3393474-3393549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3384951-3385082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3359090-3359172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3354429-3354525:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3354162-3354263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3353110-3353216:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3349834-3349984:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3341866-3342200:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3341332-3341400:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3341034-3341121:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3335037-3335148:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3334843-3334940:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3334548-3334635:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3330670-3330819:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3329992-3330188:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3319802-3319933:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3313453-3313551:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3313108-3313178:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3302096-3302209:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3300599-3300701:-1:exon

LOC114710501
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114710501
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3325079..3327172)
location: region:3325079-3327172:-1
so has part: feature:3325079-3327172:-1:exon

114710501
type: Gene
SIO_000068: ncbigene

position:3325079:-1
position: 3325079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3327172:-1
position: 3327172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3325079-3327172:-1:exon

LOC114710501
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114710501
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114710501
subclass of: SO_0000673
so part of: LOC114710501
location: complement(3325079..3325542)
location: region:3325079-3325542:-1
so has part: feature:3325079-3325542:-1:exon

position:3325542:-1
position: 3325542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3325079-3325542:-1:exon

LOC114710501
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114710501
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114710501
subclass of: SO_0000673
so part of: LOC114710501
location: complement(3326046..3326549)
location: region:3326046-3326549:-1
so has part: feature:3326046-3326549:-1:exon

position:3326046:-1
position: 3326046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3326549:-1
position: 3326549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3326046-3326549:-1:exon

LOC114710501
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114710501
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114710501
subclass of: SO_0000673
so part of: LOC114710501
location: complement(3327167..3327172)
location: region:3327167-3327172:-1
so has part: feature:3327167-3327172:-1:exon

position:3327167:-1
position: 3327167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3327167-3327172:-1:exon

LOC119086855
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119086855
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3391002..3393067)
location: region:3391002-3393067:-1
so has part: feature:3391002-3393067:-1:exon
subclass of: SO_0000011

119086855
type: Gene
SIO_000068: ncbigene

position:3391002:-1
position: 3391002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3393067:-1
position: 3393067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3391002-3393067:-1:exon

LOC119086855
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119086855
product: uncharacterized LOC119086855
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XR_005090223.1
SIO_010081: LOC119086855
subclass of: SO_0000673
so part of: LOC119086855
location: complement(join(3391002..3391586,3391795..3393067))
location: region:3391002-3393067:-1
so has part: feature:3391795-3393067:-1:exon
so has part: feature:3391002-3391586:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3391795-3393067:-1:exon

position:3391795:-1
position: 3391795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3391002-3391586:-1:exon

position:3391586:-1
position: 3391586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114710503
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114710503
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3478659..3479279
location: region:3478659-3479279:1
so has part: feature:3478659-3479279:1:exon
subclass of: SO_0000010

114710503
type: Gene
SIO_000068: ncbigene

position:3478659:1
position: 3478659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3479279:1
position: 3479279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3478659-3479279:1:exon

LOC114710503
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114710503
product: diazepam-binding inhibitor-like 5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_028894678.1
SIO_010081: LOC114710503
subclass of: SO_0000673
so part of: LOC114710503
location: join(3478659..3478747,3479124..3479279)
location: region:3478659-3479279:1
so has part: feature:3478659-3478747:1:exon
so has part: feature:3479124-3479279:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3478659-3478747:1:exon

position:3478747:1
position: 3478747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3479124-3479279:1:exon

position:3479124:1
position: 3479124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114710503
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114710503
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:3479200..3479202,aa:OTHER)
transl except: (pos:3479209..3479211,aa:OTHER)
product: LOW QUALITY PROTEIN: diazepam-binding inhibitor-like 5
translation: MSHVEFEMALTSLKQLKGPVSEKRKLLTYSFYKQTTQGDYNIPVTPATDMGTKAKXEAXNANKGCXKMDVMRIYVANMEDL
SIO_010081: LOC114710503
subclass of: SO_0000673
so part of: LOC114710503
location: join(3478659..3478747,3479124..3479279)
location: region:3478659-3479279:1
so has part: feature:3478659-3478747:1:exon
so has part: feature:3479124-3479279:1:exon

XP_028750511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3478659-3478747:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3479124-3479279:1:exon

Lin28b
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Lin28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3509689..3628189
location: region:3509689-3628189:1
so has part: feature:3509689-3628189:1:exon
subclass of: SO_0000010

114687045
type: Gene
SIO_000068: ncbigene

position:3509689:1
position: 3509689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3628189:1
position: 3628189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3509689-3628189:1:exon

Lin28b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Lin28b
product: lin-28 homolog B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_028861755.2
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(3509689..3510049,3521203..3521251,3528324..3528505,3581927..3582111,3583543..3583614,3624910..3628189)
location: region:3509689-3628189:1
so has part: feature:3509689-3510049:1:exon
so has part: feature:3521203-3521251:1:exon
so has part: feature:3528324-3528505:1:exon
so has part: feature:3581927-3582111:1:exon
so has part: feature:3583543-3583614:1:exon
so has part: feature:3624910-3628189:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3509689-3510049:1:exon

position:3510049:1
position: 3510049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3521203-3521251:1:exon

position:3521203:1
position: 3521203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3521251:1
position: 3521251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3528324-3528505:1:exon

position:3528324:1
position: 3528324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3528505:1
position: 3528505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3581927-3582111:1:exon

position:3581927:1
position: 3581927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3582111:1
position: 3582111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3583543-3583614:1:exon

position:3583543:1
position: 3583543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3583614:1
position: 3583614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3624910-3628189:1:exon

position:3624910:1
position: 3624910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Lin28b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Lin28b
product: lin-28 homolog B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_028861756.2
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(3520868..3521251,3528324..3528505,3581927..3582111,3583543..3583614,3624910..3628189)
location: region:3520868-3628189:1
so has part: feature:3520868-3521251:1:exon
so has part: feature:3528324-3528505:1:exon
so has part: feature:3581927-3582111:1:exon
so has part: feature:3583543-3583614:1:exon
so has part: feature:3624910-3628189:1:exon

position:3520868:1
position: 3520868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3520868-3521251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3528324-3528505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3581927-3582111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3583543-3583614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3624910-3628189:1:exon

Lin28b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Lin28b
product: lin-28 homolog B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_037200285.1
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(3520868..3521251,3528324..3528505,3581927..3582111,3624910..3628189)
location: region:3520868-3628189:1
so has part: feature:3520868-3521251:1:exon
so has part: feature:3528324-3528505:1:exon
so has part: feature:3581927-3582111:1:exon
so has part: feature:3624910-3628189:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3520868-3521251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3528324-3528505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3581927-3582111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3624910-3628189:1:exon

Lin28b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Lin28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-28 homolog B isoform X1
translation: MRSFNQVSSAPGGASKGEEPEKLPELAEEESQVLHGTGHCKWFNVRMGFGFISMINREGNPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSPKGLESIRVTGPGGSPCLGSERRPKGKALQKRKPKGDRWRRQDLLMDQMWTVREEESRMIPRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHRIVAQLPPSSQGRQEAECQPCTSASPREGGGGRGCTSPFPQEARSEMAEPPDRSPQEVSSVKAFAAPEEQNKKGPSIQKRKKT
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(3521218..3521251,3528324..3528505,3581927..3582111,3583543..3583614,3624910..3625276)
location: region:3521218-3625276:1
so has part: feature:3521218-3521251:1:exon
so has part: feature:3528324-3528505:1:exon
so has part: feature:3581927-3582111:1:exon
so has part: feature:3583543-3583614:1:exon
so has part: feature:3624910-3625276:1:exon

XP_028717588.1
type: Protein
SIO_000068: ncbiprotein

position:3521218:1
position: 3521218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3625276:1
position: 3625276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3521218-3521251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3528324-3528505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3581927-3582111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3583543-3583614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3624910-3625276:1:exon

Lin28b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Lin28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-28 homolog B isoform X1
translation: MRSFNQVSSAPGGASKGEEPEKLPELAEEESQVLHGTGHCKWFNVRMGFGFISMINREGNPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSPKGLESIRVTGPGGSPCLGSERRPKGKALQKRKPKGDRWRRQDLLMDQMWTVREEESRMIPRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHRIVAQLPPSSQGRQEAECQPCTSASPREGGGGRGCTSPFPQEARSEMAEPPDRSPQEVSSVKAFAAPEEQNKKGPSIQKRKKT
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(3521218..3521251,3528324..3528505,3581927..3582111,3583543..3583614,3624910..3625276)
location: region:3521218-3625276:1
so has part: feature:3521218-3521251:1:exon
so has part: feature:3528324-3528505:1:exon
so has part: feature:3581927-3582111:1:exon
so has part: feature:3583543-3583614:1:exon
so has part: feature:3624910-3625276:1:exon

XP_028717589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3521218-3521251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3528324-3528505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3581927-3582111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3583543-3583614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3624910-3625276:1:exon

Lin28b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Lin28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-28 homolog B isoform X3
translation: MRSFNQVSSAPGGASKGEEPEKLPELAEEESQVLHGTGHCKWFNVRMGFGFISMINREGNPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSPKGLESIRVTGPGGSPCLGSERRPKGKALQKRKPKGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHRIVAQLPPSSQGRQEAECQPCTSASPREGGGGRGCTSPFPQEARSEMAEPPDRSPQEVSSVKAFAAPEEQNKKGPSIQKRKKT
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(3521218..3521251,3528324..3528505,3581927..3582111,3624910..3625276)
location: region:3521218-3625276:1
so has part: feature:3521218-3521251:1:exon
so has part: feature:3528324-3528505:1:exon
so has part: feature:3581927-3582111:1:exon
so has part: feature:3624910-3625276:1:exon

XP_037056180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3521218-3521251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3528324-3528505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3581927-3582111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3624910-3625276:1:exon

Lin28b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Lin28b
product: lin-28 homolog B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_028861757.2
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(3526301..3527494,3528324..3528505,3581927..3582111,3583543..3583614,3624910..3628189)
location: region:3526301-3628189:1
so has part: feature:3526301-3527494:1:exon
so has part: feature:3528324-3528505:1:exon
so has part: feature:3581927-3582111:1:exon
so has part: feature:3583543-3583614:1:exon
so has part: feature:3624910-3628189:1:exon

position:3526301:1
position: 3526301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3526301-3527494:1:exon

position:3527494:1
position: 3527494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3528324-3528505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3581927-3582111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3583543-3583614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3624910-3628189:1:exon

Lin28b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Lin28b
product: lin-28 homolog B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037200286.1
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(3526301..3527494,3528324..3528505,3581927..3582111,3624910..3628189)
location: region:3526301-3628189:1
so has part: feature:3526301-3527494:1:exon
so has part: feature:3528324-3528505:1:exon
so has part: feature:3581927-3582111:1:exon
so has part: feature:3624910-3628189:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3526301-3527494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3528324-3528505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3581927-3582111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3624910-3628189:1:exon

Lin28b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Lin28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-28 homolog B isoform X2
translation: MAEGGASKGEEPEKLPELAEEESQVLHGTGHCKWFNVRMGFGFISMINREGNPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSPKGLESIRVTGPGGSPCLGSERRPKGKALQKRKPKGDRWRRQDLLMDQMWTVREEESRMIPRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHRIVAQLPPSSQGRQEAECQPCTSASPREGGGGRGCTSPFPQEARSEMAEPPDRSPQEVSSVKAFAAPEEQNKKGPSIQKRKKT
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(3527485..3527494,3528324..3528505,3581927..3582111,3583543..3583614,3624910..3625276)
location: region:3527485-3625276:1
so has part: feature:3527485-3527494:1:exon
so has part: feature:3528324-3528505:1:exon
so has part: feature:3581927-3582111:1:exon
so has part: feature:3583543-3583614:1:exon
so has part: feature:3624910-3625276:1:exon

XP_028717590.1
type: Protein
SIO_000068: ncbiprotein

position:3527485:1
position: 3527485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3527485-3527494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3528324-3528505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3581927-3582111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3583543-3583614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3624910-3625276:1:exon

Lin28b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Lin28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-28 homolog B isoform X4
translation: MAEGGASKGEEPEKLPELAEEESQVLHGTGHCKWFNVRMGFGFISMINREGNPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSPKGLESIRVTGPGGSPCLGSERRPKGKALQKRKPKGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHRIVAQLPPSSQGRQEAECQPCTSASPREGGGGRGCTSPFPQEARSEMAEPPDRSPQEVSSVKAFAAPEEQNKKGPSIQKRKKT
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(3527485..3527494,3528324..3528505,3581927..3582111,3624910..3625276)
location: region:3527485-3625276:1
so has part: feature:3527485-3527494:1:exon
so has part: feature:3528324-3528505:1:exon
so has part: feature:3581927-3582111:1:exon
so has part: feature:3624910-3625276:1:exon

XP_037056181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3527485-3527494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3528324-3528505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3581927-3582111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3624910-3625276:1:exon

Bves
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Bves
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3642570..3678770)
location: region:3642570-3678770:-1
so has part: feature:3642570-3678770:-1:exon
subclass of: SO_0000010

114687046
type: Gene
SIO_000068: ncbigene

position:3642570:-1
position: 3642570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3678770:-1
position: 3678770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3642570-3678770:-1:exon

Bves
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Bves
product: blood vessel epicardial substance, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_028861760.2
SIO_010081: Bves
subclass of: SO_0000673
so part of: Bves
location: complement(join(3642570..3643105,3660374..3660515,3661323..3661490,3668255..3668363,3669171..3669358,3672224..3672348,3675634..3675870,3677116..3677163,3678726..3678770))
location: region:3642570-3678770:-1
so has part: feature:3678726-3678770:-1:exon
so has part: feature:3677116-3677163:-1:exon
so has part: feature:3675634-3675870:-1:exon
so has part: feature:3672224-3672348:-1:exon
so has part: feature:3669171-3669358:-1:exon
so has part: feature:3668255-3668363:-1:exon
so has part: feature:3661323-3661490:-1:exon
so has part: feature:3660374-3660515:-1:exon
so has part: feature:3642570-3643105:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3678726-3678770:-1:exon

position:3678726:-1
position: 3678726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3677116-3677163:-1:exon

position:3677116:-1
position: 3677116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3677163:-1
position: 3677163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3675634-3675870:-1:exon

position:3675634:-1
position: 3675634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3675870:-1
position: 3675870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3672224-3672348:-1:exon

position:3672224:-1
position: 3672224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3672348:-1
position: 3672348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3669171-3669358:-1:exon

position:3669171:-1
position: 3669171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3669358:-1
position: 3669358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3668255-3668363:-1:exon

position:3668255:-1
position: 3668255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3668363:-1
position: 3668363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3661323-3661490:-1:exon

position:3661323:-1
position: 3661323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3661490:-1
position: 3661490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3660374-3660515:-1:exon

position:3660374:-1
position: 3660374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3660515:-1
position: 3660515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3642570-3643105:-1:exon

position:3643105:-1
position: 3643105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Bves
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Bves
product: blood vessel epicardial substance, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037200306.1
SIO_010081: Bves
subclass of: SO_0000673
so part of: Bves
location: complement(join(3642570..3643105,3660374..3660515,3661323..3661490,3668255..3668363,3669171..3669358,3672224..3672348,3675634..3675870,3676175..3676259,3677116..3677163,3678726..3678765))
location: region:3642570-3678765:-1
so has part: feature:3678726-3678765:-1:exon
so has part: feature:3677116-3677163:-1:exon
so has part: feature:3676175-3676259:-1:exon
so has part: feature:3675634-3675870:-1:exon
so has part: feature:3672224-3672348:-1:exon
so has part: feature:3669171-3669358:-1:exon
so has part: feature:3668255-3668363:-1:exon
so has part: feature:3661323-3661490:-1:exon
so has part: feature:3660374-3660515:-1:exon
so has part: feature:3642570-3643105:-1:exon

position:3678765:-1
position: 3678765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3678726-3678765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3677116-3677163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3676175-3676259:-1:exon

position:3676175:-1
position: 3676175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3676259:-1
position: 3676259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3675634-3675870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3672224-3672348:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3669171-3669358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3668255-3668363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3661323-3661490:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3660374-3660515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3642570-3643105:-1:exon

Bves
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Bves
product: blood vessel epicardial substance, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_037200307.1
SIO_010081: Bves
subclass of: SO_0000673
so part of: Bves
location: complement(join(3642570..3643105,3660374..3660515,3661323..3661490,3668255..3668363,3669171..3669358,3672224..3672348,3675634..3675870,3677116..3677163,3678526..3678624))
location: region:3642570-3678624:-1
so has part: feature:3678526-3678624:-1:exon
so has part: feature:3677116-3677163:-1:exon
so has part: feature:3675634-3675870:-1:exon
so has part: feature:3672224-3672348:-1:exon
so has part: feature:3669171-3669358:-1:exon
so has part: feature:3668255-3668363:-1:exon
so has part: feature:3661323-3661490:-1:exon
so has part: feature:3660374-3660515:-1:exon
so has part: feature:3642570-3643105:-1:exon

position:3678624:-1
position: 3678624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3678526-3678624:-1:exon

position:3678526:-1
position: 3678526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3677116-3677163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3675634-3675870:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3672224-3672348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3669171-3669358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3668255-3668363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3661323-3661490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3660374-3660515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3642570-3643105:-1:exon

Bves
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Bves
product: blood vessel epicardial substance, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_028861759.2
SIO_010081: Bves
subclass of: SO_0000673
so part of: Bves
location: complement(join(3642570..3643105,3660374..3660515,3661323..3661490,3668255..3668363,3669171..3669358,3672224..3672348,3675634..3675870,3676175..3676259,3677116..3677163,3678526..3678624))
location: region:3642570-3678624:-1
so has part: feature:3678526-3678624:-1:exon
so has part: feature:3677116-3677163:-1:exon
so has part: feature:3676175-3676259:-1:exon
so has part: feature:3675634-3675870:-1:exon
so has part: feature:3672224-3672348:-1:exon
so has part: feature:3669171-3669358:-1:exon
so has part: feature:3668255-3668363:-1:exon
so has part: feature:3661323-3661490:-1:exon
so has part: feature:3660374-3660515:-1:exon
so has part: feature:3642570-3643105:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3678526-3678624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3677116-3677163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3676175-3676259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3675634-3675870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3672224-3672348:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3669171-3669358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3668255-3668363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3661323-3661490:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3660374-3660515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3642570-3643105:-1:exon

Bves
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Bves
product: blood vessel epicardial substance, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_037200308.1
SIO_010081: Bves
subclass of: SO_0000673
so part of: Bves
location: complement(join(3642570..3643105,3660374..3660515,3661323..3661490,3668255..3668363,3669171..3669358,3672224..3672348,3675634..3675870,3678526..3678620))
location: region:3642570-3678620:-1
so has part: feature:3678526-3678620:-1:exon
so has part: feature:3675634-3675870:-1:exon
so has part: feature:3672224-3672348:-1:exon
so has part: feature:3669171-3669358:-1:exon
so has part: feature:3668255-3668363:-1:exon
so has part: feature:3661323-3661490:-1:exon
so has part: feature:3660374-3660515:-1:exon
so has part: feature:3642570-3643105:-1:exon

position:3678620:-1
position: 3678620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3678526-3678620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3675634-3675870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3672224-3672348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3669171-3669358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3668255-3668363:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3661323-3661490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3660374-3660515:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3642570-3643105:-1:exon

Bves
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Bves
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: blood vessel epicardial substance
translation: MNYTESSPLAESTLAGFNSELGSVTPVPSNETTCENWREVHHLVFHVANICLAVGLVIPTTLRLHMILLRGMLSIGCTLYVVWATLYRCALDIMIWNSVFLGINILHLSYLLYKKRPVKIEKELGGVYHRLFEPLRVPPDLFRRLTGQFCMIQTLKKGQTYATEDKTSVDDRLSILLKGRMKVSYRGHFLHNIYPCAFIDSPEFRSTQMHKGEKFQVTIVADDNCRFLCWSRERLTYFLESEPFLYEIFRYLIGKDITNKLYSLNDPTLNDKKVKKLEPQMSLCTQITMLEMRNSITSSSDGEDGLHHFLRSSSSTSSLPVSSPGHRASAKMKPIEEGAEDDDEVFVQVSADTPNTHRLR
SIO_010081: Bves
subclass of: SO_0000673
so part of: Bves
location: complement(join(3642981..3643105,3660374..3660515,3661323..3661490,3668255..3668363,3669171..3669358,3672224..3672348,3675634..3675859))
location: region:3642981-3675859:-1
so has part: feature:3675634-3675859:-1:exon
so has part: feature:3672224-3672348:-1:exon
so has part: feature:3669171-3669358:-1:exon
so has part: feature:3668255-3668363:-1:exon
so has part: feature:3661323-3661490:-1:exon
so has part: feature:3660374-3660515:-1:exon
so has part: feature:3642981-3643105:-1:exon

XP_028717592.1
type: Protein
SIO_000068: ncbiprotein

position:3642981:-1
position: 3642981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3675859:-1
position: 3675859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3675634-3675859:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3672224-3672348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3669171-3669358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3668255-3668363:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3661323-3661490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3660374-3660515:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3642981-3643105:-1:exon

Bves
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Bves
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: blood vessel epicardial substance
translation: MNYTESSPLAESTLAGFNSELGSVTPVPSNETTCENWREVHHLVFHVANICLAVGLVIPTTLRLHMILLRGMLSIGCTLYVVWATLYRCALDIMIWNSVFLGINILHLSYLLYKKRPVKIEKELGGVYHRLFEPLRVPPDLFRRLTGQFCMIQTLKKGQTYATEDKTSVDDRLSILLKGRMKVSYRGHFLHNIYPCAFIDSPEFRSTQMHKGEKFQVTIVADDNCRFLCWSRERLTYFLESEPFLYEIFRYLIGKDITNKLYSLNDPTLNDKKVKKLEPQMSLCTQITMLEMRNSITSSSDGEDGLHHFLRSSSSTSSLPVSSPGHRASAKMKPIEEGAEDDDEVFVQVSADTPNTHRLR
SIO_010081: Bves
subclass of: SO_0000673
so part of: Bves
location: complement(join(3642981..3643105,3660374..3660515,3661323..3661490,3668255..3668363,3669171..3669358,3672224..3672348,3675634..3675859))
location: region:3642981-3675859:-1
so has part: feature:3675634-3675859:-1:exon
so has part: feature:3672224-3672348:-1:exon
so has part: feature:3669171-3669358:-1:exon
so has part: feature:3668255-3668363:-1:exon
so has part: feature:3661323-3661490:-1:exon
so has part: feature:3660374-3660515:-1:exon
so has part: feature:3642981-3643105:-1:exon

XP_028717593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3675634-3675859:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3672224-3672348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3669171-3669358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3668255-3668363:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3661323-3661490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3660374-3660515:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3642981-3643105:-1:exon

Bves
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Bves
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: blood vessel epicardial substance
translation: MNYTESSPLAESTLAGFNSELGSVTPVPSNETTCENWREVHHLVFHVANICLAVGLVIPTTLRLHMILLRGMLSIGCTLYVVWATLYRCALDIMIWNSVFLGINILHLSYLLYKKRPVKIEKELGGVYHRLFEPLRVPPDLFRRLTGQFCMIQTLKKGQTYATEDKTSVDDRLSILLKGRMKVSYRGHFLHNIYPCAFIDSPEFRSTQMHKGEKFQVTIVADDNCRFLCWSRERLTYFLESEPFLYEIFRYLIGKDITNKLYSLNDPTLNDKKVKKLEPQMSLCTQITMLEMRNSITSSSDGEDGLHHFLRSSSSTSSLPVSSPGHRASAKMKPIEEGAEDDDEVFVQVSADTPNTHRLR
SIO_010081: Bves
subclass of: SO_0000673
so part of: Bves
location: complement(join(3642981..3643105,3660374..3660515,3661323..3661490,3668255..3668363,3669171..3669358,3672224..3672348,3675634..3675859))
location: region:3642981-3675859:-1
so has part: feature:3675634-3675859:-1:exon
so has part: feature:3672224-3672348:-1:exon
so has part: feature:3669171-3669358:-1:exon
so has part: feature:3668255-3668363:-1:exon
so has part: feature:3661323-3661490:-1:exon
so has part: feature:3660374-3660515:-1:exon
so has part: feature:3642981-3643105:-1:exon

XP_037056201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3675634-3675859:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3672224-3672348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3669171-3669358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3668255-3668363:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3661323-3661490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3660374-3660515:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3642981-3643105:-1:exon

Bves
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Bves
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: blood vessel epicardial substance
translation: MNYTESSPLAESTLAGFNSELGSVTPVPSNETTCENWREVHHLVFHVANICLAVGLVIPTTLRLHMILLRGMLSIGCTLYVVWATLYRCALDIMIWNSVFLGINILHLSYLLYKKRPVKIEKELGGVYHRLFEPLRVPPDLFRRLTGQFCMIQTLKKGQTYATEDKTSVDDRLSILLKGRMKVSYRGHFLHNIYPCAFIDSPEFRSTQMHKGEKFQVTIVADDNCRFLCWSRERLTYFLESEPFLYEIFRYLIGKDITNKLYSLNDPTLNDKKVKKLEPQMSLCTQITMLEMRNSITSSSDGEDGLHHFLRSSSSTSSLPVSSPGHRASAKMKPIEEGAEDDDEVFVQVSADTPNTHRLR
SIO_010081: Bves
subclass of: SO_0000673
so part of: Bves
location: complement(join(3642981..3643105,3660374..3660515,3661323..3661490,3668255..3668363,3669171..3669358,3672224..3672348,3675634..3675859))
location: region:3642981-3675859:-1
so has part: feature:3675634-3675859:-1:exon
so has part: feature:3672224-3672348:-1:exon
so has part: feature:3669171-3669358:-1:exon
so has part: feature:3668255-3668363:-1:exon
so has part: feature:3661323-3661490:-1:exon
so has part: feature:3660374-3660515:-1:exon
so has part: feature:3642981-3643105:-1:exon

XP_037056202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3675634-3675859:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3672224-3672348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3669171-3669358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3668255-3668363:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3661323-3661490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3660374-3660515:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3642981-3643105:-1:exon

Bves
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Bves
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: blood vessel epicardial substance
translation: MNYTESSPLAESTLAGFNSELGSVTPVPSNETTCENWREVHHLVFHVANICLAVGLVIPTTLRLHMILLRGMLSIGCTLYVVWATLYRCALDIMIWNSVFLGINILHLSYLLYKKRPVKIEKELGGVYHRLFEPLRVPPDLFRRLTGQFCMIQTLKKGQTYATEDKTSVDDRLSILLKGRMKVSYRGHFLHNIYPCAFIDSPEFRSTQMHKGEKFQVTIVADDNCRFLCWSRERLTYFLESEPFLYEIFRYLIGKDITNKLYSLNDPTLNDKKVKKLEPQMSLCTQITMLEMRNSITSSSDGEDGLHHFLRSSSSTSSLPVSSPGHRASAKMKPIEEGAEDDDEVFVQVSADTPNTHRLR
SIO_010081: Bves
subclass of: SO_0000673
so part of: Bves
location: complement(join(3642981..3643105,3660374..3660515,3661323..3661490,3668255..3668363,3669171..3669358,3672224..3672348,3675634..3675859))
location: region:3642981-3675859:-1
so has part: feature:3675634-3675859:-1:exon
so has part: feature:3672224-3672348:-1:exon
so has part: feature:3669171-3669358:-1:exon
so has part: feature:3668255-3668363:-1:exon
so has part: feature:3661323-3661490:-1:exon
so has part: feature:3660374-3660515:-1:exon
so has part: feature:3642981-3643105:-1:exon

XP_037056203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3675634-3675859:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3672224-3672348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3669171-3669358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3668255-3668363:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3661323-3661490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3660374-3660515:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3642981-3643105:-1:exon

Popdc3
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Popdc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3700759..3729933)
location: region:3700759-3729933:-1
so has part: feature:3700759-3729933:-1:exon
subclass of: SO_0000010

114687048
type: Gene
SIO_000068: ncbigene

position:3700759:-1
position: 3700759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3729933:-1
position: 3729933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3700759-3729933:-1:exon

Popdc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Popdc3
product: popeye domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_028861761.2
SIO_010081: Popdc3
subclass of: SO_0000673
so part of: Popdc3
location: complement(join(3700759..3701534,3702643..3702751,3703687..3704408,3729800..3729933))
location: region:3700759-3729933:-1
so has part: feature:3729800-3729933:-1:exon
so has part: feature:3703687-3704408:-1:exon
so has part: feature:3702643-3702751:-1:exon
so has part: feature:3700759-3701534:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3729800-3729933:-1:exon

position:3729800:-1
position: 3729800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3703687-3704408:-1:exon

position:3703687:-1
position: 3703687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3704408:-1
position: 3704408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3702643-3702751:-1:exon

position:3702643:-1
position: 3702643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3702751:-1
position: 3702751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3700759-3701534:-1:exon

position:3701534:-1
position: 3701534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Popdc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Popdc3
product: popeye domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_028861762.2
SIO_010081: Popdc3
subclass of: SO_0000673
so part of: Popdc3
location: complement(join(3700759..3701534,3702643..3702751,3703687..3704408,3728303..3728546))
location: region:3700759-3728546:-1
so has part: feature:3728303-3728546:-1:exon
so has part: feature:3703687-3704408:-1:exon
so has part: feature:3702643-3702751:-1:exon
so has part: feature:3700759-3701534:-1:exon

position:3728546:-1
position: 3728546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3728303-3728546:-1:exon

position:3728303:-1
position: 3728303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3703687-3704408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3702643-3702751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3700759-3701534:-1:exon

Popdc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Popdc3
product: popeye domain containing 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_037200348.1
SIO_010081: Popdc3
subclass of: SO_0000673
so part of: Popdc3
location: complement(join(3700759..3701534,3702643..3702751,3703687..3704408,3706450..3706752))
location: region:3700759-3706752:-1
so has part: feature:3706450-3706752:-1:exon
so has part: feature:3703687-3704408:-1:exon
so has part: feature:3702643-3702751:-1:exon
so has part: feature:3700759-3701534:-1:exon

position:3706752:-1
position: 3706752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3706450-3706752:-1:exon

position:3706450:-1
position: 3706450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3703687-3704408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3702643-3702751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3700759-3701534:-1:exon

Popdc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Popdc3
product: popeye domain containing 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_037200349.1
SIO_010081: Popdc3
subclass of: SO_0000673
so part of: Popdc3
location: complement(join(3700759..3701534,3702643..3702751,3703687..3704408,3706194..3706212))
location: region:3700759-3706212:-1
so has part: feature:3706194-3706212:-1:exon
so has part: feature:3703687-3704408:-1:exon
so has part: feature:3702643-3702751:-1:exon
so has part: feature:3700759-3701534:-1:exon

position:3706212:-1
position: 3706212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3706194-3706212:-1:exon

position:3706194:-1
position: 3706194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3703687-3704408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3702643-3702751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3700759-3701534:-1:exon

Popdc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Popdc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: popeye domain-containing protein 3
translation: MEKNSSLWRSLVGEHPVCTAWKEEAEGAIYQLASILFVVGFMGGSGFFGLLYVFSLLGLGFLCSAVWAWVDVCAADIFSWNFVLFVICFMQFVHIAYQVHSITFAREFQVLYSSLFKPLGIPVPVFRTIALSSEVVSLEKEHCYAMQGKTSVDRLSLLVSGRIRVTVDGEFLHYILPFQFLDSPEWDSLRPTEEGIFQVTLTAETDCRYVSWRRKKLYLLFAQHRYISRLFSILIGSDIADKLYALNDRVYTGKKHHYDIRLPNYYQMSSPDLSRSPLTEQFRNSRPHCNK
SIO_010081: Popdc3
subclass of: SO_0000673
so part of: Popdc3
location: complement(join(3701253..3701534,3702643..3702751,3703687..3704171))
location: region:3701253-3704171:-1
so has part: feature:3703687-3704171:-1:exon
so has part: feature:3702643-3702751:-1:exon
so has part: feature:3701253-3701534:-1:exon

XP_028717594.1
type: Protein
SIO_000068: ncbiprotein

position:3701253:-1
position: 3701253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3704171:-1
position: 3704171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3703687-3704171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3702643-3702751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3701253-3701534:-1:exon

Popdc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Popdc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: popeye domain-containing protein 3
translation: MEKNSSLWRSLVGEHPVCTAWKEEAEGAIYQLASILFVVGFMGGSGFFGLLYVFSLLGLGFLCSAVWAWVDVCAADIFSWNFVLFVICFMQFVHIAYQVHSITFAREFQVLYSSLFKPLGIPVPVFRTIALSSEVVSLEKEHCYAMQGKTSVDRLSLLVSGRIRVTVDGEFLHYILPFQFLDSPEWDSLRPTEEGIFQVTLTAETDCRYVSWRRKKLYLLFAQHRYISRLFSILIGSDIADKLYALNDRVYTGKKHHYDIRLPNYYQMSSPDLSRSPLTEQFRNSRPHCNK
SIO_010081: Popdc3
subclass of: SO_0000673
so part of: Popdc3
location: complement(join(3701253..3701534,3702643..3702751,3703687..3704171))
location: region:3701253-3704171:-1
so has part: feature:3703687-3704171:-1:exon
so has part: feature:3702643-3702751:-1:exon
so has part: feature:3701253-3701534:-1:exon

XP_028717595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3703687-3704171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3702643-3702751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3701253-3701534:-1:exon

Popdc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Popdc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: popeye domain-containing protein 3
translation: MEKNSSLWRSLVGEHPVCTAWKEEAEGAIYQLASILFVVGFMGGSGFFGLLYVFSLLGLGFLCSAVWAWVDVCAADIFSWNFVLFVICFMQFVHIAYQVHSITFAREFQVLYSSLFKPLGIPVPVFRTIALSSEVVSLEKEHCYAMQGKTSVDRLSLLVSGRIRVTVDGEFLHYILPFQFLDSPEWDSLRPTEEGIFQVTLTAETDCRYVSWRRKKLYLLFAQHRYISRLFSILIGSDIADKLYALNDRVYTGKKHHYDIRLPNYYQMSSPDLSRSPLTEQFRNSRPHCNK
SIO_010081: Popdc3
subclass of: SO_0000673
so part of: Popdc3
location: complement(join(3701253..3701534,3702643..3702751,3703687..3704171))
location: region:3701253-3704171:-1
so has part: feature:3703687-3704171:-1:exon
so has part: feature:3702643-3702751:-1:exon
so has part: feature:3701253-3701534:-1:exon

XP_037056243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3703687-3704171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3702643-3702751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3701253-3701534:-1:exon

Popdc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Popdc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: popeye domain-containing protein 3
translation: MEKNSSLWRSLVGEHPVCTAWKEEAEGAIYQLASILFVVGFMGGSGFFGLLYVFSLLGLGFLCSAVWAWVDVCAADIFSWNFVLFVICFMQFVHIAYQVHSITFAREFQVLYSSLFKPLGIPVPVFRTIALSSEVVSLEKEHCYAMQGKTSVDRLSLLVSGRIRVTVDGEFLHYILPFQFLDSPEWDSLRPTEEGIFQVTLTAETDCRYVSWRRKKLYLLFAQHRYISRLFSILIGSDIADKLYALNDRVYTGKKHHYDIRLPNYYQMSSPDLSRSPLTEQFRNSRPHCNK
SIO_010081: Popdc3
subclass of: SO_0000673
so part of: Popdc3
location: complement(join(3701253..3701534,3702643..3702751,3703687..3704171))
location: region:3701253-3704171:-1
so has part: feature:3703687-3704171:-1:exon
so has part: feature:3702643-3702751:-1:exon
so has part: feature:3701253-3701534:-1:exon

XP_037056244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3703687-3704171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3702643-3702751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3701253-3701534:-1:exon

LOC114687845
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114687845
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3881309..4003826)
location: region:3881309-4003826:-1
so has part: feature:3881309-4003826:-1:exon
subclass of: SO_0000010

114687845
type: Gene
SIO_000068: ncbigene

position:3881309:-1
position: 3881309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4003826:-1
position: 4003826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3881309-4003826:-1:exon

LOC114687845
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114687845
product: prolyl endopeptidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037200518.1
SIO_010081: LOC114687845
subclass of: SO_0000673
so part of: LOC114687845
location: complement(join(3881309..3883015,3885246..3885402,3887676..3887807,3890094..3890188,3892518..3892654,3921128..3921264,3921377..3921515,3923450..3923523,3933565..3933744,3934369..3934668,3947383..3947488,3963064..3963185,3966778..3966987,3969085..3969215,3970872..3971005,3994140..3994214,4003702..4003826))
location: region:3881309-4003826:-1
so has part: feature:4003702-4003826:-1:exon
so has part: feature:3994140-3994214:-1:exon
so has part: feature:3970872-3971005:-1:exon
so has part: feature:3969085-3969215:-1:exon
so has part: feature:3966778-3966987:-1:exon
so has part: feature:3963064-3963185:-1:exon
so has part: feature:3947383-3947488:-1:exon
so has part: feature:3934369-3934668:-1:exon
so has part: feature:3933565-3933744:-1:exon
so has part: feature:3923450-3923523:-1:exon
so has part: feature:3921377-3921515:-1:exon
so has part: feature:3921128-3921264:-1:exon
so has part: feature:3892518-3892654:-1:exon
so has part: feature:3890094-3890188:-1:exon
so has part: feature:3887676-3887807:-1:exon
so has part: feature:3885246-3885402:-1:exon
so has part: feature:3881309-3883015:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4003702-4003826:-1:exon

position:4003702:-1
position: 4003702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3994140-3994214:-1:exon

position:3994140:-1
position: 3994140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3994214:-1
position: 3994214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3970872-3971005:-1:exon

position:3970872:-1
position: 3970872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3971005:-1
position: 3971005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3969085-3969215:-1:exon

position:3969085:-1
position: 3969085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3969215:-1
position: 3969215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3966778-3966987:-1:exon

position:3966778:-1
position: 3966778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3966987:-1
position: 3966987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3963064-3963185:-1:exon

position:3963064:-1
position: 3963064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3963185:-1
position: 3963185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3947383-3947488:-1:exon

position:3947383:-1
position: 3947383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3947488:-1
position: 3947488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3934369-3934668:-1:exon

position:3934369:-1
position: 3934369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3934668:-1
position: 3934668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3933565-3933744:-1:exon

position:3933565:-1
position: 3933565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3933744:-1
position: 3933744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3923450-3923523:-1:exon

position:3923450:-1
position: 3923450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3923523:-1
position: 3923523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3921377-3921515:-1:exon

position:3921377:-1
position: 3921377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3921515:-1
position: 3921515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3921128-3921264:-1:exon

position:3921128:-1
position: 3921128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3921264:-1
position: 3921264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3892518-3892654:-1:exon

position:3892518:-1
position: 3892518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3892654:-1
position: 3892654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3890094-3890188:-1:exon

position:3890094:-1
position: 3890094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3890188:-1
position: 3890188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3887676-3887807:-1:exon

position:3887676:-1
position: 3887676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3887807:-1
position: 3887807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3885246-3885402:-1:exon

position:3885246:-1
position: 3885246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3885402:-1
position: 3885402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3881309-3883015:-1:exon

position:3883015:-1
position: 3883015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114687845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114687845
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prolyl endopeptidase
translation: MLSFQYPDVYRDETAVQDYHGHKICDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNTLSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFTCMAWTHDGKGMFYNSYPQQDGKSDGTETSTNLHQKLCYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIWEGCDPVNRLWYCDLQKESNGITGILNWVKLIDNFEGEYDYVTNEGTVFTFKTNRNSPNYRLINIDFTDPDESKWKVLVPEHEKDVLGKDRGCLESVPVRTSTGWSTSRSGDWCVSAEPLACDSSVVLEEAEFAWASPPALGVGLPLHPQASVRHTPRQPHRSSLQNPHLQLESRSSARVFHEDSSLLFVVQNVFFKATFPVLSLHDQELPGRGSQETANAIPLMVNSEVTVLEGEAVGSGADEETSAPPGYRSDLEANLRLPLLGVIYHCDLTKEELEPIVFREVTVKGIDASDYQTIQVFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDMLKFHKFTIGHAWTTDYGCSDSKQHFEWLLKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQSNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNIEWIQ
SIO_010081: LOC114687845
subclass of: SO_0000673
so part of: LOC114687845
location: complement(join(3882721..3883015,3885246..3885402,3887676..3887807,3890094..3890188,3892518..3892654,3921128..3921264,3921377..3921515,3923450..3923523,3933565..3933744,3934369..3934668,3947383..3947488,3963064..3963185,3966778..3966987,3969085..3969215,3970872..3971005,3994140..3994214,4003702..4003746))
location: region:3882721-4003746:-1
so has part: feature:4003702-4003746:-1:exon
so has part: feature:3994140-3994214:-1:exon
so has part: feature:3970872-3971005:-1:exon
so has part: feature:3969085-3969215:-1:exon
so has part: feature:3966778-3966987:-1:exon
so has part: feature:3963064-3963185:-1:exon
so has part: feature:3947383-3947488:-1:exon
so has part: feature:3934369-3934668:-1:exon
so has part: feature:3933565-3933744:-1:exon
so has part: feature:3923450-3923523:-1:exon
so has part: feature:3921377-3921515:-1:exon
so has part: feature:3921128-3921264:-1:exon
so has part: feature:3892518-3892654:-1:exon
so has part: feature:3890094-3890188:-1:exon
so has part: feature:3887676-3887807:-1:exon
so has part: feature:3885246-3885402:-1:exon
so has part: feature:3882721-3883015:-1:exon

XP_037056413.1
type: Protein
SIO_000068: ncbiprotein

position:3882721:-1
position: 3882721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4003746:-1
position: 4003746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4003702-4003746:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3994140-3994214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3970872-3971005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3969085-3969215:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3966778-3966987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3963064-3963185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3947383-3947488:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3934369-3934668:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3933565-3933744:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3923450-3923523:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3921377-3921515:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3921128-3921264:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3892518-3892654:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3890094-3890188:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3887676-3887807:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3885246-3885402:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3882721-3883015:-1:exon

LOC114687844
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114687844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3938692..3940538)
location: region:3938692-3940538:-1
so has part: feature:3938692-3940538:-1:exon
subclass of: SO_0000010

114687844
type: Gene
SIO_000068: ncbigene

position:3938692:-1
position: 3938692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3940538:-1
position: 3940538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3938692-3940538:-1:exon

LOC114687844
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114687844
product: mitochondrial fission regulator 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_028862482.2
SIO_010081: LOC114687844
subclass of: SO_0000673
so part of: LOC114687844
location: complement(3938692..3940538)
location: region:3938692-3940538:-1
so has part: feature:3938692-3940538:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3938692-3940538:-1:exon

LOC114687844
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114687844
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: mitochondrial fission regulator 1-like
translation: MLGWIKCLMRMVIQQVGVSMQSVLWSGKPYGSSRSIVRKIGTNLSLIQCPRVQFQLTSHATEGSPAHPGEDVVASFADVGWVATEEGECSTRLRAEVRSKSPPEDDLPCFEKPPSRHISLPNLSQDEHPPKTTLASEEALQKISALENELAALRAQIAKIVTLQEQQSLSAGHSDSSTVAPPPPPPPPPPPPPPPLHQSMSAVDLIKDRREQRLNAGKTLVKSHPKPPDMPNMLEILKDMNSVKLRSVKRSEKDVKPRPVDTTDPAALIAEALKKKFAYRYQHSSQGEVEREIPKPESEATSEPALFGPHILKSTGKMKALIDS
SIO_010081: LOC114687844
subclass of: SO_0000673
so part of: LOC114687844
location: complement(3939451..3940427)
location: region:3939451-3940427:-1
so has part: feature:3939451-3940427:-1:exon

XP_028718315.1
type: Protein
SIO_000068: ncbiprotein

position:3939451:-1
position: 3939451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3940427:-1
position: 3940427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3939451-3940427:-1:exon

LOC119086858
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119086858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4004101..4011913
location: region:4004101-4011913:1
so has part: feature:4004101-4011913:1:exon
subclass of: SO_0000011

119086858
type: Gene
SIO_000068: ncbigene

position:4004101:1
position: 4004101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4011913:1
position: 4011913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4004101-4011913:1:exon

LOC119086858
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119086858
product: uncharacterized LOC119086858
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005090227.1
SIO_010081: LOC119086858
subclass of: SO_0000673
so part of: LOC119086858
location: join(4004101..4004861,4007846..4007961,4011387..4011913)
location: region:4004101-4011913:1
so has part: feature:4004101-4004861:1:exon
so has part: feature:4007846-4007961:1:exon
so has part: feature:4011387-4011913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4004101-4004861:1:exon

position:4004861:1
position: 4004861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4007846-4007961:1:exon

position:4007846:1
position: 4007846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4007961:1
position: 4007961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4011387-4011913:1:exon

position:4011387:1
position: 4011387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114687846
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114687846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4019604..4020209
location: region:4019604-4020209:1
so has part: feature:4019604-4020209:1:exon

114687846
type: Gene
SIO_000068: ncbigene

position:4019604:1
position: 4019604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4020209:1
position: 4020209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4019604-4020209:1:exon

LOC114687846
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114687846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114687846
subclass of: SO_0000673
so part of: LOC114687846
location: 4019604..4020209
location: region:4019604-4020209:1
so has part: feature:4019604-4020209:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4019604-4020209:1:exon

LOC119086886
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119086886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4057358..4065577)
location: region:4057358-4065577:-1
so has part: feature:4057358-4065577:-1:exon
subclass of: SO_0000011

119086886
type: Gene
SIO_000068: ncbigene

position:4057358:-1
position: 4057358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4065577:-1
position: 4065577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4057358-4065577:-1:exon

LOC119086886
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119086886
product: uncharacterized LOC119086886
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005090273.1
SIO_010081: LOC119086886
subclass of: SO_0000673
so part of: LOC119086886
location: complement(join(4057358..4057986,4065371..4065577))
location: region:4057358-4065577:-1
so has part: feature:4065371-4065577:-1:exon
so has part: feature:4057358-4057986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4065371-4065577:-1:exon

position:4065371:-1
position: 4065371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4057358-4057986:-1:exon

position:4057986:-1
position: 4057986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114684403
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114684403
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(4362161..4362273)
location: region:4362161-4362273:-1
so has part: feature:4362161-4362273:-1:exon

114684403
type: Gene
SIO_000068: ncbigene

position:4362161:-1
position: 4362161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4362273:-1
position: 4362273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4362161-4362273:-1:exon

LOC114684403
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114684403
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC114684403
subclass of: SO_0000673
so part of: LOC114684403
location: complement(4362161..4362273)
location: region:4362161-4362273:-1
so has part: feature:4362161-4362273:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4362161-4362273:-1:exon

Prdm1
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Prdm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4621600..4643225
location: region:4621600-4643225:1
so has part: feature:4621600-4643225:1:exon
subclass of: SO_0000010

114684399
type: Gene
SIO_000068: ncbigene

position:4621600:1
position: 4621600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4643225:1
position: 4643225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4621600-4643225:1:exon

Prdm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Prdm1
product: PR/SET domain 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_028858963.2
SIO_010081: Prdm1
subclass of: SO_0000673
so part of: Prdm1
location: join(4621600..4621910,4623512..4623760,4630193..4630312,4633425..4633677,4638344..4639422,4639655..4639783,4640162..4643225)
location: region:4621600-4643225:1
so has part: feature:4621600-4621910:1:exon
so has part: feature:4623512-4623760:1:exon
so has part: feature:4630193-4630312:1:exon
so has part: feature:4633425-4633677:1:exon
so has part: feature:4638344-4639422:1:exon
so has part: feature:4639655-4639783:1:exon
so has part: feature:4640162-4643225:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4621600-4621910:1:exon

position:4621910:1
position: 4621910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4623512-4623760:1:exon

position:4623512:1
position: 4623512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4623760:1
position: 4623760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4630193-4630312:1:exon

position:4630193:1
position: 4630193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4630312:1
position: 4630312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4633425-4633677:1:exon

position:4633425:1
position: 4633425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4633677:1
position: 4633677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4638344-4639422:1:exon

position:4638344:1
position: 4638344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4639422:1
position: 4639422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4639655-4639783:1:exon

position:4639655:1
position: 4639655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4639783:1
position: 4639783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4640162-4643225:1:exon

position:4640162:1
position: 4640162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Prdm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Prdm1
product: PR/SET domain 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_028858965.2
SIO_010081: Prdm1
subclass of: SO_0000673
so part of: Prdm1
location: join(4621849..4621910,4623321..4623399,4623512..4623760,4630193..4630312,4633425..4633677,4638344..4639422,4639655..4639783,4640162..4643225)
location: region:4621849-4643225:1
so has part: feature:4621849-4621910:1:exon
so has part: feature:4623321-4623399:1:exon
so has part: feature:4623512-4623760:1:exon
so has part: feature:4630193-4630312:1:exon
so has part: feature:4633425-4633677:1:exon
so has part: feature:4638344-4639422:1:exon
so has part: feature:4639655-4639783:1:exon
so has part: feature:4640162-4643225:1:exon

position:4621849:1
position: 4621849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4621849-4621910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4623321-4623399:1:exon

position:4623321:1
position: 4623321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4623399:1
position: 4623399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4623512-4623760:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4630193-4630312:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4633425-4633677:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4638344-4639422:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4639655-4639783:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4640162-4643225:1:exon

Prdm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Prdm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 1 isoform X2
translation: MSEPYLRCGIFSWKNVWVRPCQGLHFKIVLLQGSLLYTTLDSYSTVQAAPKCSSSSVKFQGLAERTEIMKMDMEDADMTLWTEAEFEEKCTYIVNDHPWDSGADGGTSLQAEASLPRNLLFKYATTNSKEVIGVVSKEYIPQGTRFGPLIGEIYTNDTVPKNANRKYFWRIYSREEFHHFIDGFNEEKSNWMRYVNPAHSAREQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDFAERLHYPYPGELTVMNLTQTESNPKQYSGGKNELYPKNVPKREYSVKEILKLDSNPSKRKDFYRSDISPLTSEKDMDGFRKNGSPDMPFYPRVVYPIRAPLPEDYLKASLAYGIERPTYITHSPLPSSTTPSPPASSSPEQSLKSSSPHSSPGNTVSPPEPRDSYPYLNVSYGSEGLGSYPGYAPAPHLPPAFIPSYNAHYPKFLLPPYGLSSNGLSTMSNINGINNFSLFPRLYPVYSNLLGGSNLPHPMLNPASLPSSLPSDGARRLLPPEHPIPAPHSAFSLTGAAASMKDESSPPSGSPTAGTAATSEHVVQPKATSAVMAAPSTDGAMNLIKNKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKVCPAKFTQFVHLKLHKRLHTRERPHKCAQCHKSYIHLCSLKVHLKGNCPVAPAAGLPLEDLTRINEEIEKFDISDNADRLEDMEDNIDVTSMVEKEILSVVRKEKEETGLKVSLQRNMGNGLLSSGCSLYESSDLSLMKLPHSNPLPLVPVKVKQETVEPMDP
SIO_010081: Prdm1
subclass of: SO_0000673
so part of: Prdm1
location: join(4621849..4621910,4623321..4623399,4623512..4623760,4630193..4630312,4633425..4633677,4638344..4639422,4639655..4639783,4640162..4640737)
location: region:4621849-4640737:1
so has part: feature:4621849-4621910:1:exon
so has part: feature:4623321-4623399:1:exon
so has part: feature:4623512-4623760:1:exon
so has part: feature:4630193-4630312:1:exon
so has part: feature:4633425-4633677:1:exon
so has part: feature:4638344-4639422:1:exon
so has part: feature:4639655-4639783:1:exon
so has part: feature:4640162-4640737:1:exon

XP_028714798.1
type: Protein
SIO_000068: ncbiprotein

position:4640737:1
position: 4640737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4621849-4621910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4623321-4623399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4623512-4623760:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4630193-4630312:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4633425-4633677:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4638344-4639422:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4639655-4639783:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4640162-4640737:1:exon

Prdm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Prdm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 1 isoform X1
translation: MWDLLLEKRVGTTLAAPKCSSSSVKFQGLAERTEIMKMDMEDADMTLWTEAEFEEKCTYIVNDHPWDSGADGGTSLQAEASLPRNLLFKYATTNSKEVIGVVSKEYIPQGTRFGPLIGEIYTNDTVPKNANRKYFWRIYSREEFHHFIDGFNEEKSNWMRYVNPAHSAREQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDFAERLHYPYPGELTVMNLTQTESNPKQYSGGKNELYPKNVPKREYSVKEILKLDSNPSKRKDFYRSDISPLTSEKDMDGFRKNGSPDMPFYPRVVYPIRAPLPEDYLKASLAYGIERPTYITHSPLPSSTTPSPPASSSPEQSLKSSSPHSSPGNTVSPPEPRDSYPYLNVSYGSEGLGSYPGYAPAPHLPPAFIPSYNAHYPKFLLPPYGLSSNGLSTMSNINGINNFSLFPRLYPVYSNLLGGSNLPHPMLNPASLPSSLPSDGARRLLPPEHPIPAPHSAFSLTGAAASMKDESSPPSGSPTAGTAATSEHVVQPKATSAVMAAPSTDGAMNLIKNKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKVCPAKFTQFVHLKLHKRLHTRERPHKCAQCHKSYIHLCSLKVHLKGNCPVAPAAGLPLEDLTRINEEIEKFDISDNADRLEDMEDNIDVTSMVEKEILSVVRKEKEETGLKVSLQRNMGNGLLSSGCSLYESSDLSLMKLPHSNPLPLVPVKVKQETVEPMDP
SIO_010081: Prdm1
subclass of: SO_0000673
so part of: Prdm1
location: join(4621869..4621910,4623512..4623760,4630193..4630312,4633425..4633677,4638344..4639422,4639655..4639783,4640162..4640737)
location: region:4621869-4640737:1
so has part: feature:4621869-4621910:1:exon
so has part: feature:4623512-4623760:1:exon
so has part: feature:4630193-4630312:1:exon
so has part: feature:4633425-4633677:1:exon
so has part: feature:4638344-4639422:1:exon
so has part: feature:4639655-4639783:1:exon
so has part: feature:4640162-4640737:1:exon

XP_028714796.1
type: Protein
SIO_000068: ncbiprotein

position:4621869:1
position: 4621869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4621869-4621910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4623512-4623760:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4630193-4630312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4633425-4633677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4638344-4639422:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4639655-4639783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4640162-4640737:1:exon

LOC119086851
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119086851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4695663..4705522)
location: region:4695663-4705522:-1
so has part: feature:4695663-4705522:-1:exon
subclass of: SO_0000011

119086851
type: Gene
SIO_000068: ncbigene

position:4695663:-1
position: 4695663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4705522:-1
position: 4705522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4695663-4705522:-1:exon

LOC119086851
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119086851
product: uncharacterized LOC119086851, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005090218.1
SIO_010081: LOC119086851
subclass of: SO_0000673
so part of: LOC119086851
location: complement(join(4695663..4697034,4699127..4699365,4699445..4699535,4699637..4705522))
location: region:4695663-4705522:-1
so has part: feature:4699637-4705522:-1:exon
so has part: feature:4699445-4699535:-1:exon
so has part: feature:4699127-4699365:-1:exon
so has part: feature:4695663-4697034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4699637-4705522:-1:exon

position:4699637:-1
position: 4699637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4699445-4699535:-1:exon

position:4699445:-1
position: 4699445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4699535:-1
position: 4699535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4699127-4699365:-1:exon

position:4699127:-1
position: 4699127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4699365:-1
position: 4699365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4695663-4697034:-1:exon

position:4697034:-1
position: 4697034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119086851
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119086851
product: uncharacterized LOC119086851, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005090219.1
SIO_010081: LOC119086851
subclass of: SO_0000673
so part of: LOC119086851
location: complement(join(4695663..4697034,4699127..4699365,4699445..4699535,4700469..4705521))
location: region:4695663-4705521:-1
so has part: feature:4700469-4705521:-1:exon
so has part: feature:4699445-4699535:-1:exon
so has part: feature:4699127-4699365:-1:exon
so has part: feature:4695663-4697034:-1:exon

position:4705521:-1
position: 4705521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4700469-4705521:-1:exon

position:4700469:-1
position: 4700469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4699445-4699535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4699127-4699365:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4695663-4697034:-1:exon

LOC119086851
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119086851
product: uncharacterized LOC119086851, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005090217.1
SIO_010081: LOC119086851
subclass of: SO_0000673
so part of: LOC119086851
location: complement(join(4695663..4697034,4699127..4699365,4699445..4705520))
location: region:4695663-4705520:-1
so has part: feature:4699445-4705520:-1:exon
so has part: feature:4699127-4699365:-1:exon
so has part: feature:4695663-4697034:-1:exon

position:4705520:-1
position: 4705520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4699445-4705520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4699127-4699365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4695663-4697034:-1:exon

Atg5
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Atg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4715408..4824230)
location: region:4715408-4824230:-1
so has part: feature:4715408-4824230:-1:exon
subclass of: SO_0000010

114684401
type: Gene
SIO_000068: ncbigene

position:4715408:-1
position: 4715408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4824230:-1
position: 4824230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4715408-4824230:-1:exon

Atg5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Atg5
product: autophagy related 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_028858967.2
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(4715408..4716764,4732652..4732769,4758702..4758796,4794127..4794289,4803046..4803124,4806764..4806891,4810146..4810311,4824059..4824230))
location: region:4715408-4824230:-1
so has part: feature:4824059-4824230:-1:exon
so has part: feature:4810146-4810311:-1:exon
so has part: feature:4806764-4806891:-1:exon
so has part: feature:4803046-4803124:-1:exon
so has part: feature:4794127-4794289:-1:exon
so has part: feature:4758702-4758796:-1:exon
so has part: feature:4732652-4732769:-1:exon
so has part: feature:4715408-4716764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4824059-4824230:-1:exon

position:4824059:-1
position: 4824059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4810146-4810311:-1:exon

position:4810146:-1
position: 4810146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4810311:-1
position: 4810311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4806764-4806891:-1:exon

position:4806764:-1
position: 4806764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4806891:-1
position: 4806891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4803046-4803124:-1:exon

position:4803046:-1
position: 4803046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4803124:-1
position: 4803124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4794127-4794289:-1:exon

position:4794127:-1
position: 4794127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4794289:-1
position: 4794289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4758702-4758796:-1:exon

position:4758702:-1
position: 4758702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4758796:-1
position: 4758796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4732652-4732769:-1:exon

position:4732652:-1
position: 4732652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4732769:-1
position: 4732769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4715408-4716764:-1:exon

position:4716764:-1
position: 4716764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Atg5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Atg5
product: autophagy related 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_037200441.1
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(4715408..4716764,4732652..4732769,4758702..4758796,4794127..4794289,4803046..4803124,4806764..4806891,4823986..4824230))
location: region:4715408-4824230:-1
so has part: feature:4823986-4824230:-1:exon
so has part: feature:4806764-4806891:-1:exon
so has part: feature:4803046-4803124:-1:exon
so has part: feature:4794127-4794289:-1:exon
so has part: feature:4758702-4758796:-1:exon
so has part: feature:4732652-4732769:-1:exon
so has part: feature:4715408-4716764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4823986-4824230:-1:exon

position:4823986:-1
position: 4823986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4806764-4806891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4803046-4803124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4794127-4794289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4758702-4758796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4732652-4732769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4715408-4716764:-1:exon

Atg5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Atg5
product: autophagy related 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_028858966.2
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(4715408..4716764,4732652..4732769,4758702..4758796,4794127..4794289,4803046..4803124,4806764..4806891,4810146..4810311,4823986..4824230))
location: region:4715408-4824230:-1
so has part: feature:4823986-4824230:-1:exon
so has part: feature:4810146-4810311:-1:exon
so has part: feature:4806764-4806891:-1:exon
so has part: feature:4803046-4803124:-1:exon
so has part: feature:4794127-4794289:-1:exon
so has part: feature:4758702-4758796:-1:exon
so has part: feature:4732652-4732769:-1:exon
so has part: feature:4715408-4716764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4823986-4824230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4810146-4810311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4806764-4806891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4803046-4803124:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4794127-4794289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4758702-4758796:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4732652-4732769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4715408-4716764:-1:exon

Atg5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Atg5
product: autophagy related 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_028858968.2
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(4715408..4716764,4732652..4732769,4758702..4758796,4794127..4794289,4803046..4803124,4806764..4806891,4810146..4810311,4823776..4823867))
location: region:4715408-4823867:-1
so has part: feature:4823776-4823867:-1:exon
so has part: feature:4810146-4810311:-1:exon
so has part: feature:4806764-4806891:-1:exon
so has part: feature:4803046-4803124:-1:exon
so has part: feature:4794127-4794289:-1:exon
so has part: feature:4758702-4758796:-1:exon
so has part: feature:4732652-4732769:-1:exon
so has part: feature:4715408-4716764:-1:exon

position:4823867:-1
position: 4823867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4823776-4823867:-1:exon

position:4823776:-1
position: 4823776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4810146-4810311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4806764-4806891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4803046-4803124:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4794127-4794289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4758702-4758796:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4732652-4732769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4715408-4716764:-1:exon

Atg5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Atg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy protein 5 isoform X1
translation: MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKAMRQEDVSEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAVEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPPEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVCPSAVTPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIVPQPTD
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(4716628..4716764,4732652..4732769,4758702..4758796,4794127..4794289,4803046..4803124,4806764..4806891,4810146..4810253))
location: region:4716628-4810253:-1
so has part: feature:4810146-4810253:-1:exon
so has part: feature:4806764-4806891:-1:exon
so has part: feature:4803046-4803124:-1:exon
so has part: feature:4794127-4794289:-1:exon
so has part: feature:4758702-4758796:-1:exon
so has part: feature:4732652-4732769:-1:exon
so has part: feature:4716628-4716764:-1:exon

XP_028714799.1
type: Protein
SIO_000068: ncbiprotein

position:4716628:-1
position: 4716628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4810253:-1
position: 4810253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4810146-4810253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4806764-4806891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4803046-4803124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4794127-4794289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4758702-4758796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4732652-4732769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4716628-4716764:-1:exon

Atg5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Atg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy protein 5 isoform X1
translation: MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKAMRQEDVSEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAVEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPPEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVCPSAVTPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIVPQPTD
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(4716628..4716764,4732652..4732769,4758702..4758796,4794127..4794289,4803046..4803124,4806764..4806891,4810146..4810253))
location: region:4716628-4810253:-1
so has part: feature:4810146-4810253:-1:exon
so has part: feature:4806764-4806891:-1:exon
so has part: feature:4803046-4803124:-1:exon
so has part: feature:4794127-4794289:-1:exon
so has part: feature:4758702-4758796:-1:exon
so has part: feature:4732652-4732769:-1:exon
so has part: feature:4716628-4716764:-1:exon

XP_028714800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4810146-4810253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4806764-4806891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4803046-4803124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4794127-4794289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4758702-4758796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4732652-4732769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4716628-4716764:-1:exon

Atg5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Atg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy protein 5 isoform X1
translation: MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKAMRQEDVSEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAVEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPPEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVCPSAVTPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIVPQPTD
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(4716628..4716764,4732652..4732769,4758702..4758796,4794127..4794289,4803046..4803124,4806764..4806891,4810146..4810253))
location: region:4716628-4810253:-1
so has part: feature:4810146-4810253:-1:exon
so has part: feature:4806764-4806891:-1:exon
so has part: feature:4803046-4803124:-1:exon
so has part: feature:4794127-4794289:-1:exon
so has part: feature:4758702-4758796:-1:exon
so has part: feature:4732652-4732769:-1:exon
so has part: feature:4716628-4716764:-1:exon

XP_028714801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4810146-4810253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4806764-4806891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4803046-4803124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4794127-4794289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4758702-4758796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4732652-4732769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4716628-4716764:-1:exon

Atg5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Atg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy protein 5 isoform X2
translation: MRQEDVSEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAVEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPPEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVCPSAVTPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIVPQPTD
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(4716628..4716764,4732652..4732769,4758702..4758796,4794127..4794289,4803046..4803124,4806764..4806822))
location: region:4716628-4806822:-1
so has part: feature:4806764-4806822:-1:exon
so has part: feature:4803046-4803124:-1:exon
so has part: feature:4794127-4794289:-1:exon
so has part: feature:4758702-4758796:-1:exon
so has part: feature:4732652-4732769:-1:exon
so has part: feature:4716628-4716764:-1:exon

XP_037056336.1
type: Protein
SIO_000068: ncbiprotein

position:4806822:-1
position: 4806822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4806764-4806822:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4803046-4803124:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4794127-4794289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4758702-4758796:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4732652-4732769:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4716628-4716764:-1:exon

LOC114684398
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114684398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4846215..>4849152)
location: region:4846215-4849152:-1
so has part: feature:4846215-4849152:-1:exon
subclass of: SO_0000010

114684398
type: Gene
SIO_000068: ncbigene

position:4846215:-1
position: 4846215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4849152:-1
position: 4849152
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4846215-4849152:-1:exon

LOC114684398
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114684398
product: protein O-GlcNAcase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 117 samples with support for all annotated introns
transcript id: XM_037200519.1
SIO_010081: LOC114684398
subclass of: SO_0000673
so part of: LOC114684398
location: complement(join(4846215..4847249,4848811..>4849152))
location: region:4846215-4849152:-1
so has part: feature:4848811-4849152:-1:exon
so has part: feature:4846215-4847249:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4848811-4849152:-1:exon

position:4848811:-1
position: 4848811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4846215-4847249:-1:exon

position:4847249:-1
position: 4847249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114684398
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114684398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-GlcNAcase-like
translation: PMQTDDQTNKEQFVPGPNEKPLYTAEPVTLEDLQLLADLFYLPYEHRPKGAQMLQEFQWLRANSSVVSVNCKGKDSEKIEEWRSRAAKFEEMCALVMGMFTWLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPYFPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFPSLIKMDIHKKVTDPNVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEISKMEGFPKDVVILDRSL
SIO_010081: LOC114684398
subclass of: SO_0000673
so part of: LOC114684398
location: complement(join(4846416..4847249,4848811..>4849152))
location: region:4846416-4849152:-1
so has part: feature:4848811-4849152:-1:exon
so has part: feature:4846416-4847249:-1:exon

XP_037056414.1
type: Protein
SIO_000068: ncbiprotein

position:4846416:-1
position: 4846416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4848811-4849152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4846416-4847249:-1:exon

LOC114684400
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114684400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4850390..4850681)
location: region:4850390-4850681:-1
so has part: feature:4850390-4850681:-1:exon

114684400
type: Gene
SIO_000068: ncbigene

position:4850390:-1
position: 4850390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4850681:-1
position: 4850681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4850390-4850681:-1:exon

LOC114684400
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114684400
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 54% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114684400
subclass of: SO_0000673
so part of: LOC114684400
location: complement(4850390..4850681)
location: region:4850390-4850681:-1
so has part: feature:4850390-4850681:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4850390-4850681:-1:exon

LOC114684402
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114684402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4880112..4880652
location: region:4880112-4880652:1
so has part: feature:4880112-4880652:1:exon
subclass of: SO_0000010

114684402
type: Gene
SIO_000068: ncbigene

position:4880112:1
position: 4880112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4880652:1
position: 4880652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4880112-4880652:1:exon

LOC114684402
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114684402
product: 60S ribosomal protein L29-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037200458.1
SIO_010081: LOC114684402
subclass of: SO_0000673
so part of: LOC114684402
location: 4880112..4880652
location: region:4880112-4880652:1
so has part: feature:4880112-4880652:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4880112-4880652:1:exon

LOC114684402
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114684402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L29-like
translation: MAKSKNHTTHNQSRKWHRNGIKKPRSKRYQSLKGVDPKFLRNMRFAKKQNKKGLKKMSACAEAIKALVKPKAVKPKMSKGPSRKLSRLAFIAQPKFGKQIRGYMAKGRRLCQPKPKAQTKASAPAQAPNGAQAPVKAP
SIO_010081: LOC114684402
subclass of: SO_0000673
so part of: LOC114684402
location: 4880134..4880550
location: region:4880134-4880550:1
so has part: feature:4880134-4880550:1:exon

XP_037056353.1
type: Protein
SIO_000068: ncbiprotein

position:4880134:1
position: 4880134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4880550:1
position: 4880550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4880134-4880550:1:exon

Crybg1
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Crybg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4945105..5134333
location: region:4945105-5134333:1
so has part: feature:4945105-5134333:1:exon
subclass of: SO_0000010

114710672
type: Gene
SIO_000068: ncbigene

position:4945105:1
position: 4945105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5134333:1
position: 5134333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4945105-5134333:1:exon

Crybg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Crybg1
product: crystallin beta-gamma domain containing 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_028894929.2
SIO_010081: Crybg1
subclass of: SO_0000673
so part of: Crybg1
location: join(4945105..4945378,5018945..5019065,5077411..5078875,5083905..5086224,5090380..5090427,5090510..5090628,5093966..5094125,5096461..5096600,5105788..5105914,5108021..5108056,5109353..5109510,5110491..5110617,5110727..5110872,5116756..5116882,5117075..5117107,5118202..5118314,5120087..5120216,5122680..5122819,5125038..5125161,5125599..5125756,5127556..5127718,5132932..5134333)
location: region:4945105-5134333:1
so has part: feature:4945105-4945378:1:exon
so has part: feature:5018945-5019065:1:exon
so has part: feature:5077411-5078875:1:exon
so has part: feature:5083905-5086224:1:exon
so has part: feature:5090380-5090427:1:exon
so has part: feature:5090510-5090628:1:exon
so has part: feature:5093966-5094125:1:exon
so has part: feature:5096461-5096600:1:exon
so has part: feature:5105788-5105914:1:exon
so has part: feature:5108021-5108056:1:exon
so has part: feature:5109353-5109510:1:exon
so has part: feature:5110491-5110617:1:exon
so has part: feature:5110727-5110872:1:exon
so has part: feature:5116756-5116882:1:exon
so has part: feature:5117075-5117107:1:exon
so has part: feature:5118202-5118314:1:exon
so has part: feature:5120087-5120216:1:exon
so has part: feature:5122680-5122819:1:exon
so has part: feature:5125038-5125161:1:exon
so has part: feature:5125599-5125756:1:exon
so has part: feature:5127556-5127718:1:exon
so has part: feature:5132932-5134333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4945105-4945378:1:exon

position:4945378:1
position: 4945378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5018945-5019065:1:exon

position:5018945:1
position: 5018945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5019065:1
position: 5019065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5077411-5078875:1:exon

position:5077411:1
position: 5077411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5078875:1
position: 5078875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5083905-5086224:1:exon

position:5083905:1
position: 5083905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5086224:1
position: 5086224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5090380-5090427:1:exon

position:5090380:1
position: 5090380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5090427:1
position: 5090427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5090510-5090628:1:exon

position:5090510:1
position: 5090510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5090628:1
position: 5090628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5093966-5094125:1:exon

position:5093966:1
position: 5093966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5094125:1
position: 5094125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5096461-5096600:1:exon

position:5096461:1
position: 5096461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5096600:1
position: 5096600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5105788-5105914:1:exon

position:5105788:1
position: 5105788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5105914:1
position: 5105914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5108021-5108056:1:exon

position:5108021:1
position: 5108021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5108056:1
position: 5108056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5109353-5109510:1:exon

position:5109353:1
position: 5109353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5109510:1
position: 5109510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5110491-5110617:1:exon

position:5110491:1
position: 5110491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5110617:1
position: 5110617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5110727-5110872:1:exon

position:5110727:1
position: 5110727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5110872:1
position: 5110872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5116756-5116882:1:exon

position:5116756:1
position: 5116756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5116882:1
position: 5116882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5117075-5117107:1:exon

position:5117075:1
position: 5117075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5117107:1
position: 5117107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5118202-5118314:1:exon

position:5118202:1
position: 5118202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5118314:1
position: 5118314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5120087-5120216:1:exon

position:5120087:1
position: 5120087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5120216:1
position: 5120216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5122680-5122819:1:exon

position:5122680:1
position: 5122680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5122819:1
position: 5122819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5125038-5125161:1:exon

position:5125038:1
position: 5125038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5125161:1
position: 5125161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5125599-5125756:1:exon

position:5125599:1
position: 5125599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5125756:1
position: 5125756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5127556-5127718:1:exon

position:5127556:1
position: 5127556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5127718:1
position: 5127718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5132932-5134333:1:exon

position:5132932:1
position: 5132932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Crybg1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Crybg1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: beta/gamma crystallin domain-containing protein 1
translation: MPLSPPSQGGPREDSPSKAPKKHPTFHIWRSKKKQSNCGVFVPHPPGETRAFGVPDGSQEVTLHVGEPQLSHNPSEVPGPSSTESAMFKKSRAQPPEDSRRKPVLGKLGTLFTAGRRRNTRNGLESPTKSASAKLPETESEKNKAQGTQPKPTDAGAAGSGQEAEGQPAESCVQXNPCDAELSPCTGNSVGVVQQCHGSDSAQLEPLQAEGETFPNATTAAKELHSSPGNCSGQESAETPARSPGEDALPGAGLQPETARGVSGSPPEQRLVGGLGEAPDGAPGVGAEAGSLGGPGEAVAPGEPPSLGAETSRTARSVDRAHPSKVLTLDIYLSKTEVAQVDEPVPIAPGTDDCDDSDDMEKRSSGRRSGRRRKSQKSTDSPGADAVVPESSAKDDAVFDDEVAPDAAAENGSAERKVKSAHATPDAGAASVTSPEPKASASPRGQLRGEPDRGKQLPPASSPTKRRGRSRVPEAVPSGGPRAPAKESPPKRAPAAADGGGEEAGRVVPRELTVRSSSLLPEIKPEHKRGPLPHHFDGRGDGGRSRESGRGAGASDADGLKPRNHFGVGRSTVTTKVTLPARPKHVELNLKTPKNPDSLGNEHSPFSQPVHKGNTANKISLFENKRANSSPRHPDIRSTRNNPPSNKTFVGRAKLNLAKKAKEMEQPEKKALSTSHQNGLVAKEPSAEAKGTEIPNSGEDLLPVARGGGGEPTEDQVLCPEPDQSDKADVQTDAACPSQLVPTAVVPVTDPELSGEDRPEAADRKKHVFDNVSSTAQDIPAVLNATEPPPKPQGAFSDSQPASESSRESSCLPSAPIPEDTLQDGCVQVPIRSFPCADLKVSENHNECDLPMSPHTEKMPVSKLGRGEASPTSSPEHSPETVGNECPSKVLVQVRSFVLPVESPQDVSSQVTSESSEVREVHLPSCHNHEFEVVSVVPCSPEHRGVPGTSPAHTHRREERAAQSGPHILEPGPEKALPVQTQSQSSGTTLTAEFSPSHSPSSKSHSESPQRPGQNVTGRNTPTSLLNVSASSDDSVLDSSSDMEKFTEIIKNMDSTVCVPQKKKKARIPNSPAPHFAMPPIHEDSLEKVFDPNVFTIGLGKKKESQPELSPALHLMQNQDPLSKLRAKRASTEQSVLFKSLHTNTNGKSEPQPTSDMNDKENRDITNLGVKRSRLEKSTLFSSMLSSLPQDKIFSPSVTSVNTMTTSFSTSQNSSVPQSSAAQPRKEGDPPCGSDKEQPHLAPHNSLKVFNFNSSNTSHPSLKSPSPMEKQREESKEDLNSRSNLPLPEYKRSDLPTLKNCDDMEKPNLIENVLKSNVPNIGATDTDVLGLFKLSRYDPGLSFSGISLADPMTLRGGVHNKLNPRPGKIVIFSEPDVSEECIEVFRDMEDCSSWRLSPVILVKVVRGCWILYEKANFEGHSIALEEGELELSGLWGMEDILDEEAESDKPVVIGSIRHVVQDYRISQIDLFTEPEGLGLLNSYFDDTEEMQGFSMMQKTCSIKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEEAYIGSMRPLKMGGRKVEFPTDPKVIIYEKPSFEGRCMELETEMCSFVTEGSETEETTGNDHLPFTSVGSMKVLRGIWVAYEKCGFTGHQYLLEEGEYRDWKDWGGYSAELQSLRPILSDFSNAHMVMYSEKNFGSKSSSIDVLGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQYVLDKGLYTSFEDWGGKNCKISSVQPICLDSFTGPRRRNQIHLFSEPQFQGQSQSFEETINHIDDSFLTKSCRVLGGSWVAYEGENFSGNQYVLEEGHYPCLSAMGCLPGATLKSLRFIDVEFSEPTIILFERENFKGKKIELNAETVNLRSMGFNTQIRSVQVIGGIWVTYEYGNYRGRQFLLSPAEVPNWYEFSGCRQIGSLRPFIQKRIYFRLRNKATGLFMSTNGNXEDLKLLRIQVMEDVGADDQIWVYQEGCIKCRIAEDCCLTIVGSLVTSGSK…
SIO_010081: Crybg1
subclass of: SO_0000673
so part of: Crybg1
location: join(4945230..4945378,5018945..5019065,5077411..5078875,5083905..5086224,5090380..5090427,5090510..5090628,5093966..5094125,5096461..5096600,5105788..5105914,5108021..5108056,5109353..5109510,5110491..5110617,5110727..5110872,5116756..5116882,5117075..5117107,5118202..5118314,5120087..5120216,5122680..5122819,5125038..5125161,5125599..5125756,5127556..5127718,5132932..5133020)
location: region:4945230-5133020:1
so has part: feature:4945230-4945378:1:exon
so has part: feature:5018945-5019065:1:exon
so has part: feature:5077411-5078875:1:exon
so has part: feature:5083905-5086224:1:exon
so has part: feature:5090380-5090427:1:exon
so has part: feature:5090510-5090628:1:exon
so has part: feature:5093966-5094125:1:exon
so has part: feature:5096461-5096600:1:exon
so has part: feature:5105788-5105914:1:exon
so has part: feature:5108021-5108056:1:exon
so has part: feature:5109353-5109510:1:exon
so has part: feature:5110491-5110617:1:exon
so has part: feature:5110727-5110872:1:exon
so has part: feature:5116756-5116882:1:exon
so has part: feature:5117075-5117107:1:exon
so has part: feature:5118202-5118314:1:exon
so has part: feature:5120087-5120216:1:exon
so has part: feature:5122680-5122819:1:exon
so has part: feature:5125038-5125161:1:exon
so has part: feature:5125599-5125756:1:exon
so has part: feature:5127556-5127718:1:exon
so has part: feature:5132932-5133020:1:exon

XP_028750762.2
type: Protein
SIO_000068: ncbiprotein

position:4945230:1
position: 4945230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5133020:1
position: 5133020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4945230-4945378:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5018945-5019065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5077411-5078875:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5083905-5086224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5090380-5090427:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5090510-5090628:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5093966-5094125:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5096461-5096600:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5105788-5105914:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5108021-5108056:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5109353-5109510:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5110491-5110617:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5110727-5110872:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5116756-5116882:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5117075-5117107:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5118202-5118314:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5120087-5120216:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5122680-5122819:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5125038-5125161:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5125599-5125756:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5127556-5127718:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5132932-5133020:1:exon

LOC114710669
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114710669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5000865..5001657
location: region:5000865-5001657:1
so has part: feature:5000865-5001657:1:exon
subclass of: SO_0000010

114710669
type: Gene
SIO_000068: ncbigene

position:5000865:1
position: 5000865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5001657:1
position: 5001657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5000865-5001657:1:exon

LOC114710669
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114710669
product: 60S ribosomal protein L39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_028894925.2
SIO_010081: LOC114710669
subclass of: SO_0000673
so part of: LOC114710669
location: join(5000865..5000933,5001498..5001657)
location: region:5000865-5001657:1
so has part: feature:5000865-5000933:1:exon
so has part: feature:5001498-5001657:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5000865-5000933:1:exon

position:5000933:1
position: 5000933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5001498-5001657:1:exon

position:5001498:1
position: 5001498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114710669
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114710669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L39-like
translation: MATVAVVVPGNSPDKNERPESGSSSHKTFTIKRFLAKKQKESCPVPQWIQMKTGNKIRYNSKRRHWRRTKLGL
SIO_010081: LOC114710669
subclass of: SO_0000673
so part of: LOC114710669
location: join(5000865..5000933,5001498..5001650)
location: region:5000865-5001650:1
so has part: feature:5000865-5000933:1:exon
so has part: feature:5001498-5001650:1:exon

XP_028750758.1
type: Protein
SIO_000068: ncbiprotein

position:5001650:1
position: 5001650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5000865-5000933:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5001498-5001650:1:exon

Rtn4ip1
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Rtn4ip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5137993..5182642)
location: region:5137993-5182642:-1
so has part: feature:5137993-5182642:-1:exon
subclass of: SO_0000010

114710664
type: Gene
SIO_000068: ncbigene

position:5137993:-1
position: 5137993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5182642:-1
position: 5182642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5137993-5182642:-1:exon

Rtn4ip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Rtn4ip1
product: reticulon 4 interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_028894911.2
SIO_010081: Rtn4ip1
subclass of: SO_0000673
so part of: Rtn4ip1
location: complement(join(5137993..5138137,5149171..5149263,5152397..5152580,5159890..5160026,5165707..5165755,5173425..5173549,5174568..5174636,5176521..5176672,5181991..5182642))
location: region:5137993-5182642:-1
so has part: feature:5181991-5182642:-1:exon
so has part: feature:5176521-5176672:-1:exon
so has part: feature:5174568-5174636:-1:exon
so has part: feature:5173425-5173549:-1:exon
so has part: feature:5165707-5165755:-1:exon
so has part: feature:5159890-5160026:-1:exon
so has part: feature:5152397-5152580:-1:exon
so has part: feature:5149171-5149263:-1:exon
so has part: feature:5137993-5138137:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5181991-5182642:-1:exon

position:5181991:-1
position: 5181991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5176521-5176672:-1:exon

position:5176521:-1
position: 5176521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5176672:-1
position: 5176672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5174568-5174636:-1:exon

position:5174568:-1
position: 5174568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5174636:-1
position: 5174636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5173425-5173549:-1:exon

position:5173425:-1
position: 5173425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5173549:-1
position: 5173549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5165707-5165755:-1:exon

position:5165707:-1
position: 5165707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5165755:-1
position: 5165755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5159890-5160026:-1:exon

position:5159890:-1
position: 5159890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5160026:-1
position: 5160026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5152397-5152580:-1:exon

position:5152397:-1
position: 5152397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5152580:-1
position: 5152580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5149171-5149263:-1:exon

position:5149171:-1
position: 5149171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5149263:-1
position: 5149263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5137993-5138137:-1:exon

position:5138137:-1
position: 5138137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rtn4ip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Rtn4ip1
product: reticulon 4 interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_028894912.2
SIO_010081: Rtn4ip1
subclass of: SO_0000673
so part of: Rtn4ip1
location: complement(join(5137993..5138137,5149171..5149263,5152397..5152580,5159890..5160026,5165707..5165755,5173425..5173549,5174568..5174636,5176521..5176672,5182343..5182639))
location: region:5137993-5182639:-1
so has part: feature:5182343-5182639:-1:exon
so has part: feature:5176521-5176672:-1:exon
so has part: feature:5174568-5174636:-1:exon
so has part: feature:5173425-5173549:-1:exon
so has part: feature:5165707-5165755:-1:exon
so has part: feature:5159890-5160026:-1:exon
so has part: feature:5152397-5152580:-1:exon
so has part: feature:5149171-5149263:-1:exon
so has part: feature:5137993-5138137:-1:exon

position:5182639:-1
position: 5182639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5182343-5182639:-1:exon

position:5182343:-1
position: 5182343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5176521-5176672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5174568-5174636:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5173425-5173549:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5165707-5165755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5159890-5160026:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5152397-5152580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5149171-5149263:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5137993-5138137:-1:exon

Rtn4ip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Rtn4ip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-4-interacting protein 1, mitochondrial isoform X1
translation: MEVLKSCVLRRSACAAAAAACFWTSKVIPKRPFREISTTPARSTVMPAWVIDKYGKNEVLRFTQSMLLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATALNMKRDPLHIRTKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNAKNCMGKRALILGASGGVGTFAIQIMKAWGAHVTAVCSQDASELVRKLGADEVIDYTLGSVEEQLKSFKLFDFILDNVGGSTETWALNFLKKWSGATYVTLVTPFLLNMDQLGIADGMLQTGVTMGTKTLKHFWQGVHYRWAFFMASGPYLDEIAELVDSGKIRPVIEQTFPFSEVPEAFLKVERGHARGKTVVNVI
SIO_010081: Rtn4ip1
subclass of: SO_0000673
so part of: Rtn4ip1
location: complement(join(5138030..5138137,5149171..5149263,5152397..5152580,5159890..5160026,5165707..5165755,5173425..5173549,5174568..5174636,5176521..5176672,5181991..5182273))
location: region:5138030-5182273:-1
so has part: feature:5181991-5182273:-1:exon
so has part: feature:5176521-5176672:-1:exon
so has part: feature:5174568-5174636:-1:exon
so has part: feature:5173425-5173549:-1:exon
so has part: feature:5165707-5165755:-1:exon
so has part: feature:5159890-5160026:-1:exon
so has part: feature:5152397-5152580:-1:exon
so has part: feature:5149171-5149263:-1:exon
so has part: feature:5138030-5138137:-1:exon

XP_028750744.1
type: Protein
SIO_000068: ncbiprotein

position:5138030:-1
position: 5138030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5182273:-1
position: 5182273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5181991-5182273:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5176521-5176672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5174568-5174636:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5173425-5173549:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5165707-5165755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5159890-5160026:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5152397-5152580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5149171-5149263:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5138030-5138137:-1:exon

Rtn4ip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Rtn4ip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-4-interacting protein 1, mitochondrial isoform X2
translation: MKRDPLHIRTKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNAKNCMGKRALILGASGGVGTFAIQIMKAWGAHVTAVCSQDASELVRKLGADEVIDYTLGSVEEQLKSFKLFDFILDNVGGSTETWALNFLKKWSGATYVTLVTPFLLNMDQLGIADGMLQTGVTMGTKTLKHFWQGVHYRWAFFMASGPYLDEIAELVDSGKIRPVIEQTFPFSEVPEAFLKVERGHARGKTVVNVI
SIO_010081: Rtn4ip1
subclass of: SO_0000673
so part of: Rtn4ip1
location: complement(join(5138030..5138137,5149171..5149263,5152397..5152580,5159890..5160026,5165707..5165755,5173425..5173549,5174568..5174636,5176521..5176646))
location: region:5138030-5176646:-1
so has part: feature:5176521-5176646:-1:exon
so has part: feature:5174568-5174636:-1:exon
so has part: feature:5173425-5173549:-1:exon
so has part: feature:5165707-5165755:-1:exon
so has part: feature:5159890-5160026:-1:exon
so has part: feature:5152397-5152580:-1:exon
so has part: feature:5149171-5149263:-1:exon
so has part: feature:5138030-5138137:-1:exon

XP_028750745.1
type: Protein
SIO_000068: ncbiprotein

position:5176646:-1
position: 5176646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5176521-5176646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5174568-5174636:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5173425-5173549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5165707-5165755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5159890-5160026:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5152397-5152580:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5149171-5149263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5138030-5138137:-1:exon

Qrsl1
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Qrsl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5182738..5208205
location: region:5182738-5208205:1
so has part: feature:5182738-5208205:1:exon
subclass of: SO_0000010

114710663
type: Gene
SIO_000068: ncbigene

position:5182738:1
position: 5182738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5208205:1
position: 5208205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5182738-5208205:1:exon

Qrsl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Qrsl1
product: glutaminyl-tRNA amidotransferase subunit QRSL1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_028894910.2
SIO_010081: Qrsl1
subclass of: SO_0000673
so part of: Qrsl1
location: join(5182738..5182874,5190428..5190587,5191280..5191378,5192394..5192490,5196661..5196828,5199776..5199951,5200032..5200144,5202012..5202204,5202959..5203076,5205357..5205561,5207650..5208205)
location: region:5182738-5208205:1
so has part: feature:5182738-5182874:1:exon
so has part: feature:5190428-5190587:1:exon
so has part: feature:5191280-5191378:1:exon
so has part: feature:5192394-5192490:1:exon
so has part: feature:5196661-5196828:1:exon
so has part: feature:5199776-5199951:1:exon
so has part: feature:5200032-5200144:1:exon
so has part: feature:5202012-5202204:1:exon
so has part: feature:5202959-5203076:1:exon
so has part: feature:5205357-5205561:1:exon
so has part: feature:5207650-5208205:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5182738-5182874:1:exon

position:5182874:1
position: 5182874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5190428-5190587:1:exon

position:5190428:1
position: 5190428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5190587:1
position: 5190587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5191280-5191378:1:exon

position:5191280:1
position: 5191280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5191378:1
position: 5191378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5192394-5192490:1:exon

position:5192394:1
position: 5192394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5192490:1
position: 5192490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5196661-5196828:1:exon

position:5196661:1
position: 5196661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5196828:1
position: 5196828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5199776-5199951:1:exon

position:5199776:1
position: 5199776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5199951:1
position: 5199951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5200032-5200144:1:exon

position:5200032:1
position: 5200032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5200144:1
position: 5200144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5202012-5202204:1:exon

position:5202012:1
position: 5202012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5202204:1
position: 5202204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5202959-5203076:1:exon

position:5202959:1
position: 5202959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5203076:1
position: 5203076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5205357-5205561:1:exon

position:5205357:1
position: 5205357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5205561:1
position: 5205561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5207650-5208205:1:exon

position:5207650:1
position: 5207650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Qrsl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Qrsl1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
translation: MLGRTLREVSAALKQGQVTPTELCKKCLSLIRKTKCLNAYITVSEEVALKQAEESEKRYKEGRSLGALDGIPVAVKDNFSTSGIETTCASNMLKGYIPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGSTDGVFGPVRNPWSYSRQYRERRQRDAQEDSHWLIAGGSSGGSAAAVAAFTCFAALGSDTGGSTRNPAAHCGLVGFKPSYGLVSRHGLIPLVNSMDVPGIFTRCVDDTATVLGVLAGHDPKDSTTIQDPIKPSMIPSVMDVSRLCIGIPKEYLVPELSNEIRSLWSQAADLFESGGAKVIEVSLPHTCYSIVCYHVLCTSEVASNMARFDGLQYGHRSGIDVSTEAMYAATRQEGFNDVVRGRILSGNFFLLKENYENYFIKAQKVRRLIVRDFVNXFDSGVDVLLTPTTLREAVPYLEFIKEDNRTRSAQDDIFTQAVNMAGLPAVSVPVALSNQGLPIGLQLIGRAFCDQQLLAVAKWLEKQVQFPVIQLQDLLDDGSLVLENGKLASVSLTQ
SIO_010081: Qrsl1
subclass of: SO_0000673
so part of: Qrsl1
location: join(5182851..5182874,5190428..5190587,5191280..5191378,5192394..5192490,5196661..5196828,5199776..5199951,5200032..5200144,5202012..5202204,5202959..5203076,5205357..5205561,5207650..5207870)
location: region:5182851-5207870:1
so has part: feature:5182851-5182874:1:exon
so has part: feature:5190428-5190587:1:exon
so has part: feature:5191280-5191378:1:exon
so has part: feature:5192394-5192490:1:exon
so has part: feature:5196661-5196828:1:exon
so has part: feature:5199776-5199951:1:exon
so has part: feature:5200032-5200144:1:exon
so has part: feature:5202012-5202204:1:exon
so has part: feature:5202959-5203076:1:exon
so has part: feature:5205357-5205561:1:exon
so has part: feature:5207650-5207870:1:exon

XP_028750743.1
type: Protein
SIO_000068: ncbiprotein

position:5182851:1
position: 5182851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5207870:1
position: 5207870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5182851-5182874:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5190428-5190587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5191280-5191378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5192394-5192490:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5196661-5196828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5199776-5199951:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5200032-5200144:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5202012-5202204:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5202959-5203076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5205357-5205561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5207650-5207870:1:exon

Cd24
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Cd24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5506807..5511693)
location: region:5506807-5511693:-1
so has part: feature:5506807-5511693:-1:exon
subclass of: SO_0000010

114710667
type: Gene
SIO_000068: ncbigene

position:5506807:-1
position: 5506807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5511693:-1
position: 5511693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5506807-5511693:-1:exon

Cd24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cd24
product: CD24 molecule
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_028894919.2
SIO_010081: Cd24
subclass of: SO_0000673
so part of: Cd24
location: complement(join(5506807..5508452,5511531..5511693))
location: region:5506807-5511693:-1
so has part: feature:5511531-5511693:-1:exon
so has part: feature:5506807-5508452:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5511531-5511693:-1:exon

position:5511531:-1
position: 5511531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5506807-5508452:-1:exon

position:5508452:-1
position: 5508452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cd24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cd24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal transducer CD24
translation: MGRAMVARLGLGLLLLALLLPTQIYCNQTSVAPFSSNQTISTAPNPTNATTKAGGSALQSTAGLLVVSLSLLHLYC
SIO_010081: Cd24
subclass of: SO_0000673
so part of: Cd24
location: complement(join(5508291..5508452,5511531..5511599))
location: region:5508291-5511599:-1
so has part: feature:5511531-5511599:-1:exon
so has part: feature:5508291-5508452:-1:exon

XP_028750752.1
type: Protein
SIO_000068: ncbiprotein

position:5508291:-1
position: 5508291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5511599:-1
position: 5511599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5511531-5511599:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5508291-5508452:-1:exon

Mtres1
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Mtres1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5552821..5569503
location: region:5552821-5569503:1
so has part: feature:5552821-5569503:1:exon
subclass of: SO_0000010

114710666
type: Gene
SIO_000068: ncbigene

position:5552821:1
position: 5552821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5569503:1
position: 5569503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5552821-5569503:1:exon

Mtres1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Mtres1
product: mitochondrial transcription rescue factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_028894917.2
SIO_010081: Mtres1
subclass of: SO_0000673
so part of: Mtres1
location: join(5552821..5552907,5556647..5556720,5560762..5561242,5563927..5563999,5569016..5569503)
location: region:5552821-5569503:1
so has part: feature:5552821-5552907:1:exon
so has part: feature:5556647-5556720:1:exon
so has part: feature:5560762-5561242:1:exon
so has part: feature:5563927-5563999:1:exon
so has part: feature:5569016-5569503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5552821-5552907:1:exon

position:5552907:1
position: 5552907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5556647-5556720:1:exon

position:5556647:1
position: 5556647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5556720:1
position: 5556720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5560762-5561242:1:exon

position:5560762:1
position: 5560762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5561242:1
position: 5561242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5563927-5563999:1:exon

position:5563927:1
position: 5563927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5563999:1
position: 5563999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5569016-5569503:1:exon

position:5569016:1
position: 5569016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mtres1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Mtres1
product: mitochondrial transcription rescue factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_028894915.2
SIO_010081: Mtres1
subclass of: SO_0000673
so part of: Mtres1
location: join(5552822..5552907,5556647..5556703,5560762..5561242,5563927..5563999,5569016..5569503)
location: region:5552822-5569503:1
so has part: feature:5552822-5552907:1:exon
so has part: feature:5556647-5556703:1:exon
so has part: feature:5560762-5561242:1:exon
so has part: feature:5563927-5563999:1:exon
so has part: feature:5569016-5569503:1:exon

position:5552822:1
position: 5552822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5552822-5552907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5556647-5556703:1:exon

position:5556703:1
position: 5556703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5560762-5561242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5563927-5563999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5569016-5569503:1:exon

Mtres1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Mtres1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial transcription rescue factor 1
translation: MAVTAVRLLPGALRKPGAWTRLCGVLQGTSSRKLCASWNRYLHFSSTKLNTSNYKTLFCTIFPLRLPGLSVSPKCICPFSVRLKSNISSKKSTKKTLQKDADEEDSDEEIHHPERSEQEEELEDDPGVVKDYKDLEKVVQSFRYDVVLKTGLDIGRNKVEDAFYKGELRLNGDKLWKKSRTVKVGDTLDLLVRENKETGTEVVMRVLLKSVSEEKTESDKYRVLLRRWKNLKLPKKTTTASSK
SIO_010081: Mtres1
subclass of: SO_0000673
so part of: Mtres1
location: join(5560773..5561242,5563927..5563999,5569016..5569204)
location: region:5560773-5569204:1
so has part: feature:5560773-5561242:1:exon
so has part: feature:5563927-5563999:1:exon
so has part: feature:5569016-5569204:1:exon

XP_028750748.1
type: Protein
SIO_000068: ncbiprotein

position:5560773:1
position: 5560773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5569204:1
position: 5569204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5560773-5561242:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5563927-5563999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5569016-5569204:1:exon

Mtres1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Mtres1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial transcription rescue factor 1
translation: MAVTAVRLLPGALRKPGAWTRLCGVLQGTSSRKLCASWNRYLHFSSTKLNTSNYKTLFCTIFPLRLPGLSVSPKCICPFSVRLKSNISSKKSTKKTLQKDADEEDSDEEIHHPERSEQEEELEDDPGVVKDYKDLEKVVQSFRYDVVLKTGLDIGRNKVEDAFYKGELRLNGDKLWKKSRTVKVGDTLDLLVRENKETGTEVVMRVLLKSVSEEKTESDKYRVLLRRWKNLKLPKKTTTASSK
SIO_010081: Mtres1
subclass of: SO_0000673
so part of: Mtres1
location: join(5560773..5561242,5563927..5563999,5569016..5569204)
location: region:5560773-5569204:1
so has part: feature:5560773-5561242:1:exon
so has part: feature:5563927-5563999:1:exon
so has part: feature:5569016-5569204:1:exon

XP_028750750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5560773-5561242:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5563927-5563999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5569016-5569204:1:exon

Bend3
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Bend3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5577056..5618413)
location: region:5577056-5618413:-1
so has part: feature:5577056-5618413:-1:exon
subclass of: SO_0000010

114710665
type: Gene
SIO_000068: ncbigene

position:5577056:-1
position: 5577056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5618413:-1
position: 5618413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5577056-5618413:-1:exon

Bend3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Bend3
product: BEN domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_028894913.2
SIO_010081: Bend3
subclass of: SO_0000673
so part of: Bend3
location: complement(join(5577056..5582709,5603109..5603305,5603789..5603836,5618116..5618413))
location: region:5577056-5618413:-1
so has part: feature:5618116-5618413:-1:exon
so has part: feature:5603789-5603836:-1:exon
so has part: feature:5603109-5603305:-1:exon
so has part: feature:5577056-5582709:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5618116-5618413:-1:exon

position:5618116:-1
position: 5618116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5603789-5603836:-1:exon

position:5603789:-1
position: 5603789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5603836:-1
position: 5603836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5603109-5603305:-1:exon

position:5603109:-1
position: 5603109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5603305:-1
position: 5603305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5577056-5582709:-1:exon

position:5582709:-1
position: 5582709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Bend3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Bend3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 3
translation: MNSTEFGEDVEEVVKNNAVKVEGDDAALDCSRNSRASEKHPLDSVLTALQESSKRKQLGSDGQPDSVPSVKRRRLIPEALLAGMRHRENNSPCQGNGEPASRGRSGSCLWPAEEEPSNEATAPSYKKPLYGISHKIMEKKNPPSGDLLSPYELIEKANSSNSPSPLRLLNESQKRECGAGVANDGDPNIYFLIQKMFYMLNTLTSNMSQLHSKVDLLSLEVSRIKKQVSPSELVAKFQPPPEYQLTPAELKQIVEQSLSCGDLACRLLVQLFPELFSDVDFSPGCSTCGFAAKRKLESLHLQLIRNYVEVYYPSVKDTAVWQAECLPQLNDFFSRFWAQREMEDSQPGGQVTNFFEADQVDAGHFLDSKDPEEALSLDRSSTIASDHVVDTQDLTEFLDEASSPGEFAVFLLHRLFPELFDHRKLGEQYSCYGDGGKQELDPQRLQIIRNYTEIYFPDMQEEEAWLQQCAQRINDELEGLGLEGGSEGEAARDDCYDSSSLPDDISVVKVEDNFEGDRPGRRSKKIWLVPIDFDKLEIPQPDFEMPGSECLLSKEQLRSIYESSLSIGNFASRLLVHLFPELFTHENLRKQYNCSGSLGKKQLDPARIRLIRHYVQLLYPRAKNDRVWTLEFVGKLDERCRRRDTEQRRSYQQQRKVHVPGPECRDLASYAINPERFREEFEGPPLPPERSSKDFCKIPLDELVVPSPDFPVPSPYLLSDKEVREIVQQSLSVGNFAARLLVRLFPELFTAENLRLQYNHSGACNKKQLDPTRLRLIRHYVEAVYPVEKMEEVWHYECIPSIDERCRRPNRKKCDILKKAKKVEK
SIO_010081: Bend3
subclass of: SO_0000673
so part of: Bend3
location: complement(join(5580466..5582709,5603109..5603305,5603789..5603825))
location: region:5580466-5603825:-1
so has part: feature:5603789-5603825:-1:exon
so has part: feature:5603109-5603305:-1:exon
so has part: feature:5580466-5582709:-1:exon

XP_028750746.1
type: Protein
SIO_000068: ncbiprotein

position:5580466:-1
position: 5580466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5603825:-1
position: 5603825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5603789-5603825:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5603109-5603305:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5580466-5582709:-1:exon

Pdss2
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Pdss2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5665421..5894943)
location: region:5665421-5894943:-1
so has part: feature:5665421-5894943:-1:exon
subclass of: SO_0000010

114710673
type: Gene
SIO_000068: ncbigene

position:5665421:-1
position: 5665421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5894943:-1
position: 5894943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5665421-5894943:-1:exon

Pdss2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Pdss2
product: decaprenyl diphosphate synthase subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_028894931.2
SIO_010081: Pdss2
subclass of: SO_0000673
so part of: Pdss2
location: complement(join(5665421..5666237,5701200..5701232,5717368..5717499,5748552..5748626,5772789..5772987,5825489..5825617,5894353..5894943))
location: region:5665421-5894943:-1
so has part: feature:5894353-5894943:-1:exon
so has part: feature:5825489-5825617:-1:exon
so has part: feature:5772789-5772987:-1:exon
so has part: feature:5748552-5748626:-1:exon
so has part: feature:5717368-5717499:-1:exon
so has part: feature:5701200-5701232:-1:exon
so has part: feature:5665421-5666237:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5894353-5894943:-1:exon

position:5894353:-1
position: 5894353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5825489-5825617:-1:exon

position:5825489:-1
position: 5825489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5825617:-1
position: 5825617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5772789-5772987:-1:exon

position:5772789:-1
position: 5772789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5772987:-1
position: 5772987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5748552-5748626:-1:exon

position:5748552:-1
position: 5748552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5748626:-1
position: 5748626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5717368-5717499:-1:exon

position:5717368:-1
position: 5717368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5717499:-1
position: 5717499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5701200-5701232:-1:exon

position:5701200:-1
position: 5701200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5701232:-1
position: 5701232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5665421-5666237:-1:exon

position:5666237:-1
position: 5666237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pdss2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Pdss2
product: decaprenyl diphosphate synthase subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_028894930.2
SIO_010081: Pdss2
subclass of: SO_0000673
so part of: Pdss2
location: complement(join(5665421..5666237,5701200..5701232,5717368..5717499,5718606..5718779,5748552..5748626,5772789..5772987,5825489..5825617,5894353..5894941))
location: region:5665421-5894941:-1
so has part: feature:5894353-5894941:-1:exon
so has part: feature:5825489-5825617:-1:exon
so has part: feature:5772789-5772987:-1:exon
so has part: feature:5748552-5748626:-1:exon
so has part: feature:5718606-5718779:-1:exon
so has part: feature:5717368-5717499:-1:exon
so has part: feature:5701200-5701232:-1:exon
so has part: feature:5665421-5666237:-1:exon

position:5894941:-1
position: 5894941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5894353-5894941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5825489-5825617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5772789-5772987:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5748552-5748626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5718606-5718779:-1:exon

position:5718606:-1
position: 5718606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5718779:-1
position: 5718779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5717368-5717499:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5701200-5701232:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5665421-5666237:-1:exon

Pdss2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Pdss2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: decaprenyl-diphosphate synthase subunit 2 isoform X2
translation: MSLRQLLSRLSGYLGASGPPHRQWWCSRSLDTISSVGSRRGRSSRSPAHWNQVVSEAEKIVGYPASFMSLRCLLSDELSNIAMQLRKLVGTQHPLLTTARGFVHDSRHNLQLRGLVVLLISKAAGPSAENCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMKFGNKIAILSGDFLLANACNGLALLQNTKVVELLTSALKDLVHGVYQENSTSAKINSDLQPFMKDQTSGSTTFNLNSAPVVLHQELLGRDLWIKQIGEAQEKGRLNYTKLRETIKAGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIVFAVTRFS
SIO_010081: Pdss2
subclass of: SO_0000673
so part of: Pdss2
location: complement(join(5666079..5666237,5701200..5701232,5717368..5717499,5748552..5748626,5772789..5772987,5825489..5825617,5894353..5894651))
location: region:5666079-5894651:-1
so has part: feature:5894353-5894651:-1:exon
so has part: feature:5825489-5825617:-1:exon
so has part: feature:5772789-5772987:-1:exon
so has part: feature:5748552-5748626:-1:exon
so has part: feature:5717368-5717499:-1:exon
so has part: feature:5701200-5701232:-1:exon
so has part: feature:5666079-5666237:-1:exon

XP_028750764.1
type: Protein
SIO_000068: ncbiprotein

position:5666079:-1
position: 5666079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5894651:-1
position: 5894651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5894353-5894651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5825489-5825617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5772789-5772987:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5748552-5748626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5717368-5717499:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5701200-5701232:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5666079-5666237:-1:exon

Pdss2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Pdss2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: decaprenyl-diphosphate synthase subunit 2 isoform X1
translation: MSLRQLLSRLSGYLGASGPPHRQWWCSRSLDTISSVGSRRGRSSRSPAHWNQVVSEAEKIVGYPASFMSLRCLLSDELSNIAMQLRKLVGTQHPLLTTARGFVHDSRHNLQLRGLVVLLISKAAGPSAENCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMKFGNKIAILSGDFLLANACNGLALLQNTKVVELLTSALKDLVHGVYQENSTSAKGHSITENIGISTWKEQTFLSHCALLAKSCQAAMELAKHDAEVQDMAFQYGKHMAMSHKINSDLQPFMKDQTSGSTTFNLNSAPVVLHQELLGRDLWIKQIGEAQEKGRLNYTKLRETIKAGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIVFAVTRFS
SIO_010081: Pdss2
subclass of: SO_0000673
so part of: Pdss2
location: complement(join(5666079..5666237,5701200..5701232,5717368..5717499,5718606..5718779,5748552..5748626,5772789..5772987,5825489..5825617,5894353..5894651))
location: region:5666079-5894651:-1
so has part: feature:5894353-5894651:-1:exon
so has part: feature:5825489-5825617:-1:exon
so has part: feature:5772789-5772987:-1:exon
so has part: feature:5748552-5748626:-1:exon
so has part: feature:5718606-5718779:-1:exon
so has part: feature:5717368-5717499:-1:exon
so has part: feature:5701200-5701232:-1:exon
so has part: feature:5666079-5666237:-1:exon

XP_028750763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5894353-5894651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5825489-5825617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5772789-5772987:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5748552-5748626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5718606-5718779:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5717368-5717499:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5701200-5701232:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5666079-5666237:-1:exon

LOC114710674
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114710674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5840687..5841157
location: region:5840687-5841157:1
so has part: feature:5840687-5841157:1:exon
subclass of: SO_0000010

114710674
type: Gene
SIO_000068: ncbigene

position:5840687:1
position: 5840687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5841157:1
position: 5841157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5840687-5841157:1:exon

LOC114710674
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114710674
product: 60S ribosomal protein L30-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_028894932.2
SIO_010081: LOC114710674
subclass of: SO_0000673
so part of: LOC114710674
location: 5840687..5841157
location: region:5840687-5841157:1
so has part: feature:5840687-5841157:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5840687-5841157:1:exon

LOC114710674
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114710674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L30-like
translation: MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLTKTGVHHYSGNNIELGTACGKYYRVCILAIIDPGDSDIIRSMPEQTGEK
SIO_010081: LOC114710674
subclass of: SO_0000673
so part of: LOC114710674
location: 5840766..5841113
location: region:5840766-5841113:1
so has part: feature:5840766-5841113:1:exon

XP_028750765.1
type: Protein
SIO_000068: ncbiprotein

position:5840766:1
position: 5840766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5841113:1
position: 5841113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5840766-5841113:1:exon

LOC114710668
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114710668
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5939889..6107195
location: region:5939889-6107195:1
so has part: feature:5939889-6107195:1:exon
subclass of: SO_0000010

114710668
type: Gene
SIO_000068: ncbigene

position:5939889:1
position: 5939889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6107195:1
position: 6107195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5939889-6107195:1:exon

LOC114710668
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114710668
product: sine oculis binding protein homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_028894921.2
SIO_010081: LOC114710668
subclass of: SO_0000673
so part of: LOC114710668
location: join(5939889..5940493,5953858..5953996,5956637..5956822,5986661..5986812,6086015..6087943,6105338..6107195)
location: region:5939889-6107195:1
so has part: feature:5939889-5940493:1:exon
so has part: feature:5953858-5953996:1:exon
so has part: feature:5956637-5956822:1:exon
so has part: feature:5986661-5986812:1:exon
so has part: feature:6086015-6087943:1:exon
so has part: feature:6105338-6107195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5939889-5940493:1:exon

position:5940493:1
position: 5940493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5953858-5953996:1:exon

position:5953858:1
position: 5953858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5953996:1
position: 5953996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5956637-5956822:1:exon

position:5956637:1
position: 5956637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5956822:1
position: 5956822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5986661-5986812:1:exon

position:5986661:1
position: 5986661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5986812:1
position: 5986812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6086015-6087943:1:exon

position:6086015:1
position: 6086015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6087943:1
position: 6087943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6105338-6107195:1:exon

position:6105338:1
position: 6105338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114710668
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114710668
product: sine oculis binding protein homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_028894920.2
SIO_010081: LOC114710668
subclass of: SO_0000673
so part of: LOC114710668
location: join(5939891..5940493,5953858..5953996,5956637..5956822,5986661..5986812,6037501..6037596,6086015..6087943,6105338..6107195)
location: region:5939891-6107195:1
so has part: feature:5939891-5940493:1:exon
so has part: feature:5953858-5953996:1:exon
so has part: feature:5956637-5956822:1:exon
so has part: feature:5986661-5986812:1:exon
so has part: feature:6037501-6037596:1:exon
so has part: feature:6086015-6087943:1:exon
so has part: feature:6105338-6107195:1:exon

position:5939891:1
position: 5939891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5939891-5940493:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5953858-5953996:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5956637-5956822:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5986661-5986812:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6037501-6037596:1:exon

position:6037501:1
position: 6037501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6037596:1
position: 6037596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6086015-6087943:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6105338-6107195:1:exon

LOC114710668
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114710668
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sine oculis-binding protein homolog isoform X1
translation: MAEMEKEGRPPENKRSRKPAHPVKREINEEMKNFAENTMNELLGWYGYDKVELKDGEDIEFRSYPTDGESRQHISVLKENSLPKPKLPEDSVISSYNISAGYSGLATGNGLSDSPAGSKDHGNVPIIVPLIPPPFIKPPAEDDVSNVQIMCAWCQKVGIKRYSLSMGSEVKSFCSEKCFAACRRAYFKRNKARDEDGRAETFPQQHFAKETPRLAFKNNCELLVCDWCKHIRHTKEYLDFGDGERRLQFCSAKCLNQYKMDIFYKETQANLPAGLCSTLHPHMESKAEGTGVQLLTPDSWNIPLTDARRKAPSPVAAAGQSQGPGPSSSTTVSPSDTANCSVTKIPTPVPKSLPISETPSIPPVSVQPPANIGPPLGVPPRSPPMVMTNRGPVPLPIFMEQQIIQQIRPPFIRGPPHHASNPNSPLSNPMLPGIGPPPGGPRNLGPTSSPMHRPMLSPHIHPPSTPTMPGNPPGLLPPPPPGAPLPSLPFPPVSMMPNGPMPVPQMMNFGLPSLAPLVPPPTLLVPYPVIVPLPVPIPIPIPIPHVNDSKPPNGFSSNGESFVPSAPGDSAAAGGKSGGRSLSPRDSKQGSSKSADSPPGSSGQALSLAPAERGRGEVVDLTRRAGSPVGAGGQPGFAGVLHGPQDGVIDLTVGHRARLHNVIHRALHAHVKAEREPGAAERRTCGGCRDGHCSPPAAGDPGPGAPAGPEAAAACNVIVNGTRGAPAEAKGAEPPPEQPPPPAPPKKLLSPEEPAVNELESVKENNCSSSCHLDGEATKKLMGEEALAGGDKSDPNLNNPADEDHAYALRMLPKTGCVIQPVPKPTEKAAMAPCVISSPMLSAGPEDLEPPLKRRCLRIRNQNK
SIO_010081: LOC114710668
subclass of: SO_0000673
so part of: LOC114710668
location: join(5940398..5940493,5953858..5953996,5956637..5956822,5986661..5986812,6037501..6037596,6086015..6087940)
location: region:5940398-6087940:1
so has part: feature:5940398-5940493:1:exon
so has part: feature:5953858-5953996:1:exon
so has part: feature:5956637-5956822:1:exon
so has part: feature:5986661-5986812:1:exon
so has part: feature:6037501-6037596:1:exon
so has part: feature:6086015-6087940:1:exon

XP_028750753.1
type: Protein
SIO_000068: ncbiprotein

position:5940398:1
position: 5940398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6087940:1
position: 6087940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5940398-5940493:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5953858-5953996:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5956637-5956822:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5986661-5986812:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6037501-6037596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6086015-6087940:1:exon

LOC114710668
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114710668
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sine oculis-binding protein homolog isoform X2
translation: MAEMEKEGRPPENKRSRKPAHPVKREINEEMKNFAENTMNELLGWYGYDKVELKDGEDIEFRSYPTDGESRQHISVLKENSLPKPKLPEDSVISSYNISAGYSGLATGNGLSDSPAGSKDHGNVPIIVPLIPPPFIKPPAEDDVSNVQIMCAWCQKVGIKRYSLSMGSEVKSFCSEKCFAACRRAYFKRNKVCDWCKHIRHTKEYLDFGDGERRLQFCSAKCLNQYKMDIFYKETQANLPAGLCSTLHPHMESKAEGTGVQLLTPDSWNIPLTDARRKAPSPVAAAGQSQGPGPSSSTTVSPSDTANCSVTKIPTPVPKSLPISETPSIPPVSVQPPANIGPPLGVPPRSPPMVMTNRGPVPLPIFMEQQIIQQIRPPFIRGPPHHASNPNSPLSNPMLPGIGPPPGGPRNLGPTSSPMHRPMLSPHIHPPSTPTMPGNPPGLLPPPPPGAPLPSLPFPPVSMMPNGPMPVPQMMNFGLPSLAPLVPPPTLLVPYPVIVPLPVPIPIPIPIPHVNDSKPPNGFSSNGESFVPSAPGDSAAAGGKSGGRSLSPRDSKQGSSKSADSPPGSSGQALSLAPAERGRGEVVDLTRRAGSPVGAGGQPGFAGVLHGPQDGVIDLTVGHRARLHNVIHRALHAHVKAEREPGAAERRTCGGCRDGHCSPPAAGDPGPGAPAGPEAAAACNVIVNGTRGAPAEAKGAEPPPEQPPPPAPPKKLLSPEEPAVNELESVKENNCSSSCHLDGEATKKLMGEEALAGGDKSDPNLNNPADEDHAYALRMLPKTGCVIQPVPKPTEKAAMAPCVISSPMLSAGPEDLEPPLKRRCLRIRNQNK
SIO_010081: LOC114710668
subclass of: SO_0000673
so part of: LOC114710668
location: join(5940398..5940493,5953858..5953996,5956637..5956822,5986661..5986812,6086015..6087940)
location: region:5940398-6087940:1
so has part: feature:5940398-5940493:1:exon
so has part: feature:5953858-5953996:1:exon
so has part: feature:5956637-5956822:1:exon
so has part: feature:5986661-5986812:1:exon
so has part: feature:6086015-6087940:1:exon

XP_028750754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5940398-5940493:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5953858-5953996:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5956637-5956822:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5986661-5986812:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6086015-6087940:1:exon

LOC114710662
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114710662
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6123920..6124771)
location: region:6123920-6124771:-1
so has part: feature:6123920-6124771:-1:exon

114710662
type: Gene
SIO_000068: ncbigene

position:6123920:-1
position: 6123920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6124771:-1
position: 6124771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6123920-6124771:-1:exon

LOC114710662
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114710662
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114710662
subclass of: SO_0000673
so part of: LOC114710662
location: complement(6123920..6124771)
location: region:6123920-6124771:-1
so has part: feature:6123920-6124771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6123920-6124771:-1:exon

Scml4
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Scml4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6148420..6254781)
location: region:6148420-6254781:-1
so has part: feature:6148420-6254781:-1:exon
subclass of: SO_0000010

114710676
type: Gene
SIO_000068: ncbigene

position:6148420:-1
position: 6148420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6254781:-1
position: 6254781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6148420-6254781:-1:exon

Scml4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Scml4
product: Scm polycomb group protein like 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037200315.1
SIO_010081: Scml4
subclass of: SO_0000673
so part of: Scml4
location: complement(join(6148420..6151214,6152968..6153113,6161330..6161614,6176553..6176747,6180149..6180349,6184378..6184519,6203447..6203659,6254641..6254781))
location: region:6148420-6254781:-1
so has part: feature:6254641-6254781:-1:exon
so has part: feature:6203447-6203659:-1:exon
so has part: feature:6184378-6184519:-1:exon
so has part: feature:6180149-6180349:-1:exon
so has part: feature:6176553-6176747:-1:exon
so has part: feature:6161330-6161614:-1:exon
so has part: feature:6152968-6153113:-1:exon
so has part: feature:6148420-6151214:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6254641-6254781:-1:exon

position:6254641:-1
position: 6254641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6203447-6203659:-1:exon

position:6203447:-1
position: 6203447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6203659:-1
position: 6203659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6184378-6184519:-1:exon

position:6184378:-1
position: 6184378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6184519:-1
position: 6184519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6180149-6180349:-1:exon

position:6180149:-1
position: 6180149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6180349:-1
position: 6180349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6176553-6176747:-1:exon

position:6176553:-1
position: 6176553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6176747:-1
position: 6176747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6161330-6161614:-1:exon

position:6161330:-1
position: 6161330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6161614:-1
position: 6161614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6152968-6153113:-1:exon

position:6152968:-1
position: 6152968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6153113:-1
position: 6153113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6148420-6151214:-1:exon

position:6151214:-1
position: 6151214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Scml4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Scml4
product: Scm polycomb group protein like 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_037200316.1
SIO_010081: Scml4
subclass of: SO_0000673
so part of: Scml4
location: complement(join(6148420..6151214,6152968..6153113,6161330..6161614,6176553..6176747,6180149..6180349,6184378..6184519,6203447..6203659,6254373..6254628))
location: region:6148420-6254628:-1
so has part: feature:6254373-6254628:-1:exon
so has part: feature:6203447-6203659:-1:exon
so has part: feature:6184378-6184519:-1:exon
so has part: feature:6180149-6180349:-1:exon
so has part: feature:6176553-6176747:-1:exon
so has part: feature:6161330-6161614:-1:exon
so has part: feature:6152968-6153113:-1:exon
so has part: feature:6148420-6151214:-1:exon

position:6254628:-1
position: 6254628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6254373-6254628:-1:exon

position:6254373:-1
position: 6254373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6203447-6203659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6184378-6184519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6180149-6180349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6176553-6176747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6161330-6161614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6152968-6153113:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6148420-6151214:-1:exon

Scml4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Scml4
product: Scm polycomb group protein like 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_037200317.1
SIO_010081: Scml4
subclass of: SO_0000673
so part of: Scml4
location: complement(join(6148420..6151214,6152968..6153113,6161330..6161614,6169206..6169810))
location: region:6148420-6169810:-1
so has part: feature:6169206-6169810:-1:exon
so has part: feature:6161330-6161614:-1:exon
so has part: feature:6152968-6153113:-1:exon
so has part: feature:6148420-6151214:-1:exon

position:6169810:-1
position: 6169810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6169206-6169810:-1:exon

position:6169206:-1
position: 6169206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6161330-6161614:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6152968-6153113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6148420-6151214:-1:exon

Scml4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Scml4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sex comb on midleg-like protein 4 isoform X1
translation: MDLSSPCALPPHSVRLAPAEMQTQKVPGRKRGRPPLHATPVPMAVHNLYSASAGSGPAVTIPKKRGRKPRYKTLLQIKPPVLMTPLALSPPRSTPEPDLSSIPQDAATIPSLVVPQALTVCLYINKQADSGPYLERRKLQQLPERLGPERPAAVLQQAVQACIDCAHQPRLVFSLVKQGYRGELVSVSASFDGKQHLRSLPVVNSVGYVLRFLTKLCRSLLCDNLFSHLPYPGSLGASEKTQEREDARTESAQAAPAEECLANPVGMSRYSMDASSTAFGHRGSLTHSSSQYYKRLNSGDSHLGGGPPATTGGSRTNAVPLGGPSTPGLRFPASSPKRSDVEGDRCASSPSPEVPDIRRLSSRNPSTWTVEDVVRFLKDADPQALGPHVELFRKHEIDGNALLLLRSDMIMKYLGLKLGPALKLCYHIDKLKQAKF
SIO_010081: Scml4
subclass of: SO_0000673
so part of: Scml4
location: complement(join(6151089..6151214,6152968..6153113,6161330..6161614,6176553..6176747,6180149..6180349,6184378..6184519,6203447..6203659,6254641..6254643))
location: region:6151089-6254643:-1
so has part: feature:6254641-6254643:-1:exon
so has part: feature:6203447-6203659:-1:exon
so has part: feature:6184378-6184519:-1:exon
so has part: feature:6180149-6180349:-1:exon
so has part: feature:6176553-6176747:-1:exon
so has part: feature:6161330-6161614:-1:exon
so has part: feature:6152968-6153113:-1:exon
so has part: feature:6151089-6151214:-1:exon

XP_037056210.1
type: Protein
SIO_000068: ncbiprotein

position:6151089:-1
position: 6151089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6254643:-1
position: 6254643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6254641-6254643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6203447-6203659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6184378-6184519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6180149-6180349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6176553-6176747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6161330-6161614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6152968-6153113:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6151089-6151214:-1:exon

Scml4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Scml4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sex comb on midleg-like protein 4 isoform X2
translation: MQTQKVPGRKRGRPPLHATPVPMAVHNLYSASAGSGPAVTIPKKRGRKPRYKTLLQIKPPVLMTPLALSPPRSTPEPDLSSIPQDAATIPSLVVPQALTVCLYINKQADSGPYLERRKLQQLPERLGPERPAAVLQQAVQACIDCAHQPRLVFSLVKQGYRGELVSVSASFDGKQHLRSLPVVNSVGYVLRFLTKLCRSLLCDNLFSHLPYPGSLGASEKTQEREDARTESAQAAPAEECLANPVGMSRYSMDASSTAFGHRGSLTHSSSQYYKRLNSGDSHLGGGPPATTGGSRTNAVPLGGPSTPGLRFPASSPKRSDVEGDRCASSPSPEVPDIRRLSSRNPSTWTVEDVVRFLKDADPQALGPHVELFRKHEIDGNALLLLRSDMIMKYLGLKLGPALKLCYHIDKLKQAKF
SIO_010081: Scml4
subclass of: SO_0000673
so part of: Scml4
location: complement(join(6151089..6151214,6152968..6153113,6161330..6161614,6176553..6176747,6180149..6180349,6184378..6184519,6203447..6203602))
location: region:6151089-6203602:-1
so has part: feature:6203447-6203602:-1:exon
so has part: feature:6184378-6184519:-1:exon
so has part: feature:6180149-6180349:-1:exon
so has part: feature:6176553-6176747:-1:exon
so has part: feature:6161330-6161614:-1:exon
so has part: feature:6152968-6153113:-1:exon
so has part: feature:6151089-6151214:-1:exon

XP_037056211.1
type: Protein
SIO_000068: ncbiprotein

position:6203602:-1
position: 6203602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6203447-6203602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6184378-6184519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6180149-6180349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6176553-6176747:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6161330-6161614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6152968-6153113:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6151089-6151214:-1:exon

Scml4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Scml4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sex comb on midleg-like protein 4 isoform X3
translation: MSRYSMDASSTAFGHRGSLTHSSSQYYKRLNSGDSHLGGGPPATTGGSRTNAVPLGGPSTPGLRFPASSPKRSDVEGDRCASSPSPEVPDIRRLSSRNPSTWTVEDVVRFLKDADPQALGPHVELFRKHEIDGNALLLLRSDMIMKYLGLKLGPALKLCYHIDKLKQAKF
SIO_010081: Scml4
subclass of: SO_0000673
so part of: Scml4
location: complement(join(6151089..6151214,6152968..6153113,6161330..6161570))
location: region:6151089-6161570:-1
so has part: feature:6161330-6161570:-1:exon
so has part: feature:6152968-6153113:-1:exon
so has part: feature:6151089-6151214:-1:exon

XP_037056212.1
type: Protein
SIO_000068: ncbiprotein

position:6161570:-1
position: 6161570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6161330-6161570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6152968-6153113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6151089-6151214:-1:exon

LOC114710670
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114710670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6275191..6276000
location: region:6275191-6276000:1
so has part: feature:6275191-6276000:1:exon
subclass of: SO_0000010

114710670
type: Gene
SIO_000068: ncbigene

position:6275191:1
position: 6275191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6276000:1
position: 6276000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6275191-6276000:1:exon

LOC114710670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114710670
product: signal recognition particle 19 kDa protein-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_028894927.2
SIO_010081: LOC114710670
subclass of: SO_0000673
so part of: LOC114710670
location: 6275191..6276000
location: region:6275191-6276000:1
so has part: feature:6275191-6276000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6275191-6276000:1:exon

LOC114710670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114710670
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: signal recognition particle 19 kDa protein-like
translation: MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNAFLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQKTGGADPSLQQGEGSKKGKGKKKK
SIO_010081: LOC114710670
subclass of: SO_0000673
so part of: LOC114710670
location: 6275240..6275675
location: region:6275240-6275675:1
so has part: feature:6275240-6275675:1:exon

XP_028750760.1
type: Protein
SIO_000068: ncbiprotein

position:6275240:1
position: 6275240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6275675:1
position: 6275675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6275240-6275675:1:exon

Sec63
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Sec63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6290399..6370485)
location: region:6290399-6370485:-1
so has part: feature:6290399-6370485:-1:exon
subclass of: SO_0000010

114710675
type: Gene
SIO_000068: ncbigene

position:6290399:-1
position: 6290399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6370485:-1
position: 6370485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6290399-6370485:-1:exon

Sec63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Sec63
product: SEC63 homolog, protein translocation regulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 97 samples with support for all annotated introns
transcript id: XM_028894933.2
SIO_010081: Sec63
subclass of: SO_0000673
so part of: Sec63
location: complement(join(6290399..6294107,6295037..6295141,6298479..6298577,6303590..6303691,6305579..6305737,6309489..6309662,6309791..6309850,6312523..6312605,6319655..6319802,6321495..6321649,6323214..6323306,6326115..6326247,6326343..6326437,6328847..6328955,6329958..6330008,6331705..6331763,6333552..6333613,6336452..6336564,6338114..6338228,6343987..6344086,6370321..6370485))
location: region:6290399-6370485:-1
so has part: feature:6370321-6370485:-1:exon
so has part: feature:6343987-6344086:-1:exon
so has part: feature:6338114-6338228:-1:exon
so has part: feature:6336452-6336564:-1:exon
so has part: feature:6333552-6333613:-1:exon
so has part: feature:6331705-6331763:-1:exon
so has part: feature:6329958-6330008:-1:exon
so has part: feature:6328847-6328955:-1:exon
so has part: feature:6326343-6326437:-1:exon
so has part: feature:6326115-6326247:-1:exon
so has part: feature:6323214-6323306:-1:exon
so has part: feature:6321495-6321649:-1:exon
so has part: feature:6319655-6319802:-1:exon
so has part: feature:6312523-6312605:-1:exon
so has part: feature:6309791-6309850:-1:exon
so has part: feature:6309489-6309662:-1:exon
so has part: feature:6305579-6305737:-1:exon
so has part: feature:6303590-6303691:-1:exon
so has part: feature:6298479-6298577:-1:exon
so has part: feature:6295037-6295141:-1:exon
so has part: feature:6290399-6294107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6370321-6370485:-1:exon

position:6370321:-1
position: 6370321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6343987-6344086:-1:exon

position:6343987:-1
position: 6343987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6344086:-1
position: 6344086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6338114-6338228:-1:exon

position:6338114:-1
position: 6338114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6338228:-1
position: 6338228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6336452-6336564:-1:exon

position:6336452:-1
position: 6336452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6336564:-1
position: 6336564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6333552-6333613:-1:exon

position:6333552:-1
position: 6333552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6333613:-1
position: 6333613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6331705-6331763:-1:exon

position:6331705:-1
position: 6331705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6331763:-1
position: 6331763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6329958-6330008:-1:exon

position:6329958:-1
position: 6329958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6330008:-1
position: 6330008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6328847-6328955:-1:exon

position:6328847:-1
position: 6328847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6328955:-1
position: 6328955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6326343-6326437:-1:exon

position:6326343:-1
position: 6326343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6326437:-1
position: 6326437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6326115-6326247:-1:exon

position:6326115:-1
position: 6326115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6326247:-1
position: 6326247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6323214-6323306:-1:exon

position:6323214:-1
position: 6323214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6323306:-1
position: 6323306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6321495-6321649:-1:exon

position:6321495:-1
position: 6321495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6321649:-1
position: 6321649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6319655-6319802:-1:exon

position:6319655:-1
position: 6319655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6319802:-1
position: 6319802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6312523-6312605:-1:exon

position:6312523:-1
position: 6312523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6312605:-1
position: 6312605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6309791-6309850:-1:exon

position:6309791:-1
position: 6309791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6309850:-1
position: 6309850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6309489-6309662:-1:exon

position:6309489:-1
position: 6309489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6309662:-1
position: 6309662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6305579-6305737:-1:exon

position:6305579:-1
position: 6305579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6305737:-1
position: 6305737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6303590-6303691:-1:exon

position:6303590:-1
position: 6303590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6303691:-1
position: 6303691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6298479-6298577:-1:exon

position:6298479:-1
position: 6298479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6298577:-1
position: 6298577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6295037-6295141:-1:exon

position:6295037:-1
position: 6295037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6295141:-1
position: 6295141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6290399-6294107:-1:exon

position:6294107:-1
position: 6294107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Sec63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Sec63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocation protein SEC63 homolog
translation: MAGQQFQYDDSGNTFFYFLTSFVGLIVIPATYYLWPRDQNAEQIRLKNIRKVYGRCMWYRLRLLKPQPNIIPTVKKIVLLAGWALFLFLAYKVSKTDREYQEYNPYEVLNLDPGATVAEIKKQYRLLSLKYHPDKGGDEVMFMRIAKAYAALTDEESRKNWEEFGNPDGPQATSFGIALPAWIVDQKNSILVLLVYGLAFMVILPVVVGSWWYRSIRYSGDQILIRTTQIYTYFVYKTRNMDMKRLIMVLAGASEFDPQYNKDATSRPTDNILIPQLIREIGSINLKKNEPPLTCPYSLKARVLLLSHLARMKIPETLEEDQQFMLKKCPALLQEMVNVICQLIIMARSREEREFRAPTLASLENCMKLSQMAVQGLQQFKSPLLQLPHIEEDNLRRVSNHKKYKIKTIQDLVSLKESDRHSLLHFLEDDKYEEVMAVLGSFPYVTMDIKSQVLDDEDSNNITVGSLVTVLVKLTRQTMAEVFEKEQSICAAEEQPTEDGQSDASKNKAKGGWQQKSKGPKKMPKSKKKKPLKKKPTALPFPPAKQQKQKQANGVVGSEAAAKEEEDDISDKGSDSEEEETNRESQSEKEDGSDRESDREQDEKQNKDDEAEWQELQQSIQRKERALLETKSKITHPVYSLYFPEEKQEWWWLYIADRKEQTLISMPYHVCTLKDTEEVELKFPAPGKPGNYQYTVFLRSDSYMGLDQIKPLKLEVHEAKPVPENHPQWDTAIEGDEDQEDSEGFEDSFEEEEEEEEGDN
SIO_010081: Sec63
subclass of: SO_0000673
so part of: Sec63
location: complement(join(6293964..6294107,6295037..6295141,6298479..6298577,6303590..6303691,6305579..6305737,6309489..6309662,6309791..6309850,6312523..6312605,6319655..6319802,6321495..6321649,6323214..6323306,6326115..6326247,6326343..6326437,6328847..6328955,6329958..6330008,6331705..6331763,6333552..6333613,6336452..6336564,6338114..6338228,6343987..6344086,6370321..6370444))
location: region:6293964-6370444:-1
so has part: feature:6370321-6370444:-1:exon
so has part: feature:6343987-6344086:-1:exon
so has part: feature:6338114-6338228:-1:exon
so has part: feature:6336452-6336564:-1:exon
so has part: feature:6333552-6333613:-1:exon
so has part: feature:6331705-6331763:-1:exon
so has part: feature:6329958-6330008:-1:exon
so has part: feature:6328847-6328955:-1:exon
so has part: feature:6326343-6326437:-1:exon
so has part: feature:6326115-6326247:-1:exon
so has part: feature:6323214-6323306:-1:exon
so has part: feature:6321495-6321649:-1:exon
so has part: feature:6319655-6319802:-1:exon
so has part: feature:6312523-6312605:-1:exon
so has part: feature:6309791-6309850:-1:exon
so has part: feature:6309489-6309662:-1:exon
so has part: feature:6305579-6305737:-1:exon
so has part: feature:6303590-6303691:-1:exon
so has part: feature:6298479-6298577:-1:exon
so has part: feature:6295037-6295141:-1:exon
so has part: feature:6293964-6294107:-1:exon

XP_028750766.1
type: Protein
SIO_000068: ncbiprotein

position:6293964:-1
position: 6293964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6370444:-1
position: 6370444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6370321-6370444:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6343987-6344086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6338114-6338228:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6336452-6336564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6333552-6333613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6331705-6331763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6329958-6330008:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6328847-6328955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6326343-6326437:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6326115-6326247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6323214-6323306:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6321495-6321649:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6319655-6319802:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6312523-6312605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6309791-6309850:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6309489-6309662:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6305579-6305737:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6303590-6303691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6298479-6298577:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6295037-6295141:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6293964-6294107:-1:exon

LOC114710677
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114710677
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6313016..6313127
location: region:6313016-6313127:1
so has part: feature:6313016-6313127:1:exon
subclass of: SO_0000623

114710677
type: Gene
SIO_000068: ncbigene

position:6313016:1
position: 6313016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6313127:1
position: 6313127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6313016-6313127:1:exon

LOC114710677
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: snRNA
gene: LOC114710677
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003737086.1
SIO_010081: LOC114710677
subclass of: SO_0000673
so part of: LOC114710677
location: 6313016..6313127
location: region:6313016-6313127:1
so has part: feature:6313016-6313127:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6313016-6313127:1:exon

Ostm1
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Ostm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6426347..6454991)
location: region:6426347-6454991:-1
so has part: feature:6426347-6454991:-1:exon
subclass of: SO_0000010

114710671
type: Gene
SIO_000068: ncbigene

position:6426347:-1
position: 6426347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6454991:-1
position: 6454991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6426347-6454991:-1:exon

Ostm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Ostm1
product: osteoclastogenesis associated transmembrane protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037200520.1
SIO_010081: Ostm1
subclass of: SO_0000673
so part of: Ostm1
location: complement(join(6426347..6428225,6431174..6431339,6433538..6433705,6436529..6436659,6451477..6451623,6451867..6452027,6454473..6454991))
location: region:6426347-6454991:-1
so has part: feature:6454473-6454991:-1:exon
so has part: feature:6451867-6452027:-1:exon
so has part: feature:6451477-6451623:-1:exon
so has part: feature:6436529-6436659:-1:exon
so has part: feature:6433538-6433705:-1:exon
so has part: feature:6431174-6431339:-1:exon
so has part: feature:6426347-6428225:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6454473-6454991:-1:exon

position:6454473:-1
position: 6454473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6451867-6452027:-1:exon

position:6451867:-1
position: 6451867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6452027:-1
position: 6452027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6451477-6451623:-1:exon

position:6451477:-1
position: 6451477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6451623:-1
position: 6451623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6436529-6436659:-1:exon

position:6436529:-1
position: 6436529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6436659:-1
position: 6436659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6433538-6433705:-1:exon

position:6433538:-1
position: 6433538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6433705:-1
position: 6433705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6431174-6431339:-1:exon

position:6431174:-1
position: 6431174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6431339:-1
position: 6431339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6426347-6428225:-1:exon

position:6428225:-1
position: 6428225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ostm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Ostm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: osteopetrosis-associated transmembrane protein 1
translation: MAPDSVLGLRSRWPSRWLRALLLLQLLRWRSALGGLPFGSSRQPGFADLLSEQQLLEVQDLTLSLLQGGGLGPLTLLPPDLPDLEPECREMLMDFANSSAELTGCLVRSARPVRLCQTCYPLFQQVASKMDNISRTFGVGREASPAPVPNSKCENLVLGEFVYERLERVSKVACDPSLHWAELGAEGLAGNATDFSLKPAGPSLDSSLERSFWQHGPGKWEEEEDTREMNETVVKEMVAAKPRVPLRDGEIASSRRARGKILKSPHTCHRPPSSSAHSRPRFSSHAVSSVRLRYHGRTYSLLPPKNYSEVCKNCNDAYKMLSALYSEMQKMNGLESKAEPGTHLCIDVEDAMNITRKLWSRTFNCSVTCSDTVSVVAVSVFILFLPVVFYLSSFLHSEQKKRKLILPKRLKSSTSFANIQENAT
SIO_010081: Ostm1
subclass of: SO_0000673
so part of: Ostm1
location: complement(join(6428170..6428225,6431174..6431339,6433538..6433705,6436529..6436659,6451477..6451623,6451867..6452027,6454473..6454918))
location: region:6428170-6454918:-1
so has part: feature:6454473-6454918:-1:exon
so has part: feature:6451867-6452027:-1:exon
so has part: feature:6451477-6451623:-1:exon
so has part: feature:6436529-6436659:-1:exon
so has part: feature:6433538-6433705:-1:exon
so has part: feature:6431174-6431339:-1:exon
so has part: feature:6428170-6428225:-1:exon

XP_037056415.1
type: Protein
SIO_000068: ncbiprotein

position:6428170:-1
position: 6428170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6454918:-1
position: 6454918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6454473-6454918:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6451867-6452027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6451477-6451623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6436529-6436659:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6433538-6433705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6431174-6431339:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6428170-6428225:-1:exon

Nr2e1
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Nr2e1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6554543..6576168
location: region:6554543-6576168:1
so has part: feature:6554543-6576168:1:exon
subclass of: SO_0000010

114707508
type: Gene
SIO_000068: ncbigene

position:6554543:1
position: 6554543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6576168:1
position: 6576168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6554543-6576168:1:exon

Nr2e1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Nr2e1
product: nuclear receptor subfamily 2 group E member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_028890246.2
SIO_010081: Nr2e1
subclass of: SO_0000673
so part of: Nr2e1
location: join(6554543..6555370,6559934..6560079,6563533..6563620,6565024..6565259,6566447..6566593,6568994..6569090,6569478..6569627,6569901..6570006,6574763..6576168)
location: region:6554543-6576168:1
so has part: feature:6554543-6555370:1:exon
so has part: feature:6559934-6560079:1:exon
so has part: feature:6563533-6563620:1:exon
so has part: feature:6565024-6565259:1:exon
so has part: feature:6566447-6566593:1:exon
so has part: feature:6568994-6569090:1:exon
so has part: feature:6569478-6569627:1:exon
so has part: feature:6569901-6570006:1:exon
so has part: feature:6574763-6576168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6554543-6555370:1:exon

position:6555370:1
position: 6555370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6559934-6560079:1:exon

position:6559934:1
position: 6559934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6560079:1
position: 6560079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6563533-6563620:1:exon

position:6563533:1
position: 6563533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6563620:1
position: 6563620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6565024-6565259:1:exon

position:6565024:1
position: 6565024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6565259:1
position: 6565259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6566447-6566593:1:exon

position:6566447:1
position: 6566447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6566593:1
position: 6566593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6568994-6569090:1:exon

position:6568994:1
position: 6568994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6569090:1
position: 6569090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6569478-6569627:1:exon

position:6569478:1
position: 6569478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6569627:1
position: 6569627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6569901-6570006:1:exon

position:6569901:1
position: 6569901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6570006:1
position: 6570006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6574763-6576168:1:exon

position:6574763:1
position: 6574763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nr2e1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Nr2e1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group E member 1
translation: MSKPAGSTSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEDNGTAAHFPSAALPAPAFFTAVTQLEPHSLELAAVSATPERQTLVSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGLNSDNTDPQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMYKSSDI
SIO_010081: Nr2e1
subclass of: SO_0000673
so part of: Nr2e1
location: join(6555346..6555370,6559934..6560079,6563533..6563620,6565024..6565259,6566447..6566593,6568994..6569090,6569478..6569627,6569901..6570006,6574763..6574925)
location: region:6555346-6574925:1
so has part: feature:6555346-6555370:1:exon
so has part: feature:6559934-6560079:1:exon
so has part: feature:6563533-6563620:1:exon
so has part: feature:6565024-6565259:1:exon
so has part: feature:6566447-6566593:1:exon
so has part: feature:6568994-6569090:1:exon
so has part: feature:6569478-6569627:1:exon
so has part: feature:6569901-6570006:1:exon
so has part: feature:6574763-6574925:1:exon

XP_028746079.1
type: Protein
SIO_000068: ncbiprotein

position:6555346:1
position: 6555346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6574925:1
position: 6574925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6555346-6555370:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6559934-6560079:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6563533-6563620:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6565024-6565259:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6566447-6566593:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6568994-6569090:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6569478-6569627:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6569901-6570006:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6574763-6574925:1:exon

Snx3
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Snx3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6607525..6644066)
location: region:6607525-6644066:-1
so has part: feature:6607525-6644066:-1:exon
subclass of: SO_0000010

114707505
type: Gene
SIO_000068: ncbigene

position:6607525:-1
position: 6607525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6644066:-1
position: 6644066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6607525-6644066:-1:exon

Snx3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Snx3
product: sorting nexin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 121 samples with support for all annotated introns
transcript id: XM_028890241.1
SIO_010081: Snx3
subclass of: SO_0000673
so part of: Snx3
location: complement(join(6607525..6607909,6609944..6610068,6613949..6614044,6643600..6644066))
location: region:6607525-6644066:-1
so has part: feature:6643600-6644066:-1:exon
so has part: feature:6613949-6614044:-1:exon
so has part: feature:6609944-6610068:-1:exon
so has part: feature:6607525-6607909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6643600-6644066:-1:exon

position:6643600:-1
position: 6643600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6613949-6614044:-1:exon

position:6613949:-1
position: 6613949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6614044:-1
position: 6614044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6609944-6610068:-1:exon

position:6609944:-1
position: 6609944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6610068:-1
position: 6610068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6607525-6607909:-1:exon

position:6607909:-1
position: 6607909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Snx3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Snx3
product: sorting nexin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_037200509.1
SIO_010081: Snx3
subclass of: SO_0000673
so part of: Snx3
location: complement(join(6607770..6607854,6609944..6610068,6613949..6614044,6643600..6643854))
location: region:6607770-6643854:-1
so has part: feature:6643600-6643854:-1:exon
so has part: feature:6613949-6614044:-1:exon
so has part: feature:6609944-6610068:-1:exon
so has part: feature:6607770-6607854:-1:exon

position:6607770:-1
position: 6607770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6643854:-1
position: 6643854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6643600-6643854:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6613949-6614044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6609944-6610068:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6607770-6607854:-1:exon

position:6607854:-1
position: 6607854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Snx3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Snx3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-3 isoform X1
translation: MAETVADTRRLITKPQNLNDAYGPPSNFLEIDVSNPQTVGVGRGRFTTYEIRVKTNLPIFKLKESTVRRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLPFRGDDGIFDDNFIEERKQGLEQFINKVAGHPLAQNERCLHMFLQDEIIDKSYTPSKIRHA
SIO_010081: Snx3
subclass of: SO_0000673
so part of: Snx3
location: complement(join(6607804..6607909,6609944..6610068,6613949..6614044,6643600..6643761))
location: region:6607804-6643761:-1
so has part: feature:6643600-6643761:-1:exon
so has part: feature:6613949-6614044:-1:exon
so has part: feature:6609944-6610068:-1:exon
so has part: feature:6607804-6607909:-1:exon

XP_028746074.1
type: Protein
SIO_000068: ncbiprotein

position:6607804:-1
position: 6607804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6643761:-1
position: 6643761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6643600-6643761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6613949-6614044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6609944-6610068:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6607804-6607909:-1:exon

Snx3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Snx3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-3 isoform X2
translation: MAETVADTRRLITKPQNLNDAYGPPSNFLEIDVSNPQTVGVGRGRFTTYEIRVKTNLPIFKLKESTVRRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLPFRGDDGIFDDNFIEERKQGLEQFINKMK
SIO_010081: Snx3
subclass of: SO_0000673
so part of: Snx3
location: complement(join(6607845..6607854,6609944..6610068,6613949..6614044,6643600..6643761))
location: region:6607845-6643761:-1
so has part: feature:6643600-6643761:-1:exon
so has part: feature:6613949-6614044:-1:exon
so has part: feature:6609944-6610068:-1:exon
so has part: feature:6607845-6607854:-1:exon

XP_037056404.1
type: Protein
SIO_000068: ncbiprotein

position:6607845:-1
position: 6607845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6643600-6643761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6613949-6614044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6609944-6610068:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6607845-6607854:-1:exon

Afg1l
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Afg1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6668169..6836081
location: region:6668169-6836081:1
so has part: feature:6668169-6836081:1:exon
subclass of: SO_0000010

114707522
type: Gene
SIO_000068: ncbigene

position:6668169:1
position: 6668169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6836081:1
position: 6836081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6668169-6836081:1:exon

Afg1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Afg1l
product: AFG1 like ATPase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_037200459.1
SIO_010081: Afg1l
subclass of: SO_0000673
so part of: Afg1l
location: join(6668169..6668476,6694386..6694609,6707932..6707983,6715296..6715397,6716530..6716660,6725184..6725283,6742300..6742358,6775397..6775479,6795314..6795384,6795641..6795741,6825841..6825981,6829107..6829220,6835956..6836081)
location: region:6668169-6836081:1
so has part: feature:6668169-6668476:1:exon
so has part: feature:6694386-6694609:1:exon
so has part: feature:6707932-6707983:1:exon
so has part: feature:6715296-6715397:1:exon
so has part: feature:6716530-6716660:1:exon
so has part: feature:6725184-6725283:1:exon
so has part: feature:6742300-6742358:1:exon
so has part: feature:6775397-6775479:1:exon
so has part: feature:6795314-6795384:1:exon
so has part: feature:6795641-6795741:1:exon
so has part: feature:6825841-6825981:1:exon
so has part: feature:6829107-6829220:1:exon
so has part: feature:6835956-6836081:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6668169-6668476:1:exon

position:6668476:1
position: 6668476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6694386-6694609:1:exon

position:6694386:1
position: 6694386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6694609:1
position: 6694609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6707932-6707983:1:exon

position:6707932:1
position: 6707932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6707983:1
position: 6707983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6715296-6715397:1:exon

position:6715296:1
position: 6715296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6715397:1
position: 6715397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6716530-6716660:1:exon

position:6716530:1
position: 6716530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6716660:1
position: 6716660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6725184-6725283:1:exon

position:6725184:1
position: 6725184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6725283:1
position: 6725283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6742300-6742358:1:exon

position:6742300:1
position: 6742300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6742358:1
position: 6742358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6775397-6775479:1:exon

position:6775397:1
position: 6775397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6775479:1
position: 6775479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6795314-6795384:1:exon

position:6795314:1
position: 6795314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6795384:1
position: 6795384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6795641-6795741:1:exon

position:6795641:1
position: 6795641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6795741:1
position: 6795741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6825841-6825981:1:exon

position:6825841:1
position: 6825841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6825981:1
position: 6825981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6829107-6829220:1:exon

position:6829107:1
position: 6829107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6829220:1
position: 6829220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6835956-6836081:1:exon

position:6835956:1
position: 6835956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Afg1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Afg1l
product: AFG1 like ATPase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_028890259.2
SIO_010081: Afg1l
subclass of: SO_0000673
so part of: Afg1l
location: join(6668170..6668476,6694386..6694609,6707932..6707983,6715296..6715397,6716530..6716660,6725184..6725283,6742300..6742358,6775397..6775479,6795314..6795384,6795641..6795741,6825841..6825981,6829107..6829220,6831336..6832312)
location: region:6668170-6832312:1
so has part: feature:6668170-6668476:1:exon
so has part: feature:6694386-6694609:1:exon
so has part: feature:6707932-6707983:1:exon
so has part: feature:6715296-6715397:1:exon
so has part: feature:6716530-6716660:1:exon
so has part: feature:6725184-6725283:1:exon
so has part: feature:6742300-6742358:1:exon
so has part: feature:6775397-6775479:1:exon
so has part: feature:6795314-6795384:1:exon
so has part: feature:6795641-6795741:1:exon
so has part: feature:6825841-6825981:1:exon
so has part: feature:6829107-6829220:1:exon
so has part: feature:6831336-6832312:1:exon

position:6668170:1
position: 6668170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6832312:1
position: 6832312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6668170-6668476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6694386-6694609:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6707932-6707983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6715296-6715397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6716530-6716660:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6725184-6725283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6742300-6742358:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6775397-6775479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6795314-6795384:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6795641-6795741:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6825841-6825981:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6829107-6829220:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6831336-6832312:1:exon

position:6831336:1
position: 6831336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Afg1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Afg1l
product: AFG1 like ATPase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_028890260.1
SIO_010081: Afg1l
subclass of: SO_0000673
so part of: Afg1l
location: join(6668171..6668476,6694386..6694609,6715296..6715397,6716530..6716660,6725184..6725283,6742300..6742358,6775397..6775479,6795314..6795384,6795641..6795741,6825841..6825981,6829107..6829220,6831336..6832312)
location: region:6668171-6832312:1
so has part: feature:6668171-6668476:1:exon
so has part: feature:6694386-6694609:1:exon
so has part: feature:6715296-6715397:1:exon
so has part: feature:6716530-6716660:1:exon
so has part: feature:6725184-6725283:1:exon
so has part: feature:6742300-6742358:1:exon
so has part: feature:6775397-6775479:1:exon
so has part: feature:6795314-6795384:1:exon
so has part: feature:6795641-6795741:1:exon
so has part: feature:6825841-6825981:1:exon
so has part: feature:6829107-6829220:1:exon
so has part: feature:6831336-6832312:1:exon

position:6668171:1
position: 6668171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6668171-6668476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6694386-6694609:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6715296-6715397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6716530-6716660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6725184-6725283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6742300-6742358:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6775397-6775479:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6795314-6795384:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6795641-6795741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6825841-6825981:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6829107-6829220:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6831336-6832312:1:exon

Afg1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Afg1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AFG1-like ATPase isoform X2
translation: MAASWSPLVTLRAAARSRLTGRGVGCGARAVAIPAPAPGPGSPLWKAYTVQTSAGVRPTAASEAHSKALAVCRGPLDHYEFLIKAQELRDDEHQRRVIQCLQKLLEDLKGYSIEEEGLLSKLFSKNKPPKGLYVYGDVGTGKTMVMDMFYAYVEMKRKKRVHFHGFMLDVHRRIHRLKQSLPKRKAGFMTKSYDPIAPIAEEISQEACLLCFDEFQVTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKEYCNTVQLDSGIDYRKRELIPAGKLYYLTSEADVEAVMDKLFDELAQKQNDLTRPRILNVQGRELRLNKACGTVADCTFEELCERPLGASDYLELSKNFDTVFVRNIPQFSMAKRTEARRFITLIDNFYDYKVRIICCASAPIPSLFLHQHHDSELEQSRILMDDLGLSQQ
SIO_010081: Afg1l
subclass of: SO_0000673
so part of: Afg1l
location: join(6668338..6668476,6694386..6694609,6707932..6707983,6715296..6715397,6716530..6716660,6725184..6725283,6742300..6742358,6775397..6775479,6795314..6795384,6795641..6795741,6825841..6825981,6829107..6829220,6835956..6835961)
location: region:6668338-6835961:1
so has part: feature:6668338-6668476:1:exon
so has part: feature:6694386-6694609:1:exon
so has part: feature:6707932-6707983:1:exon
so has part: feature:6715296-6715397:1:exon
so has part: feature:6716530-6716660:1:exon
so has part: feature:6725184-6725283:1:exon
so has part: feature:6742300-6742358:1:exon
so has part: feature:6775397-6775479:1:exon
so has part: feature:6795314-6795384:1:exon
so has part: feature:6795641-6795741:1:exon
so has part: feature:6825841-6825981:1:exon
so has part: feature:6829107-6829220:1:exon
so has part: feature:6835956-6835961:1:exon

XP_037056354.1
type: Protein
SIO_000068: ncbiprotein

position:6668338:1
position: 6668338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6835961:1
position: 6835961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6668338-6668476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6694386-6694609:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6707932-6707983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6715296-6715397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6716530-6716660:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6725184-6725283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6742300-6742358:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6775397-6775479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6795314-6795384:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6795641-6795741:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6825841-6825981:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6829107-6829220:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6835956-6835961:1:exon

Afg1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Afg1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AFG1-like ATPase isoform X1
translation: MAASWSPLVTLRAAARSRLTGRGVGCGARAVAIPAPAPGPGSPLWKAYTVQTSAGVRPTAASEAHSKALAVCRGPLDHYEFLIKAQELRDDEHQRRVIQCLQKLLEDLKGYSIEEEGLLSKLFSKNKPPKGLYVYGDVGTGKTMVMDMFYAYVEMKRKKRVHFHGFMLDVHRRIHRLKQSLPKRKAGFMTKSYDPIAPIAEEISQEACLLCFDEFQVTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKEYCNTVQLDSGIDYRKRELIPAGKLYYLTSEADVEAVMDKLFDELAQKQNDLTRPRILNVQGRELRLNKACGTVADCTFEELCERPLGASDYLELSKNFDTVFVRNIPQFSMAKRTEARRFITLIDNFYDYKVRIICCASAPIPSLFLHQHHDSELEQSRILMDDLGLSQDSAGLSMFTGEEEVFAFHRTVSRLTEMQTEQYWVEGDRSKK
SIO_010081: Afg1l
subclass of: SO_0000673
so part of: Afg1l
location: join(6668338..6668476,6694386..6694609,6707932..6707983,6715296..6715397,6716530..6716660,6725184..6725283,6742300..6742358,6775397..6775479,6795314..6795384,6795641..6795741,6825841..6825981,6829107..6829220,6831336..6831461)
location: region:6668338-6831461:1
so has part: feature:6668338-6668476:1:exon
so has part: feature:6694386-6694609:1:exon
so has part: feature:6707932-6707983:1:exon
so has part: feature:6715296-6715397:1:exon
so has part: feature:6716530-6716660:1:exon
so has part: feature:6725184-6725283:1:exon
so has part: feature:6742300-6742358:1:exon
so has part: feature:6775397-6775479:1:exon
so has part: feature:6795314-6795384:1:exon
so has part: feature:6795641-6795741:1:exon
so has part: feature:6825841-6825981:1:exon
so has part: feature:6829107-6829220:1:exon
so has part: feature:6831336-6831461:1:exon

XP_028746092.1
type: Protein
SIO_000068: ncbiprotein

position:6831461:1
position: 6831461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6668338-6668476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6694386-6694609:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6707932-6707983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6715296-6715397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6716530-6716660:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6725184-6725283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6742300-6742358:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6775397-6775479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6795314-6795384:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6795641-6795741:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6825841-6825981:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6829107-6829220:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6831336-6831461:1:exon

Afg1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Afg1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AFG1-like ATPase isoform X3
translation: MVMDMFYAYVEMKRKKRVHFHGFMLDVHRRIHRLKQSLPKRKAGFMTKSYDPIAPIAEEISQEACLLCFDEFQVTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKEYCNTVQLDSGIDYRKRELIPAGKLYYLTSEADVEAVMDKLFDELAQKQNDLTRPRILNVQGRELRLNKACGTVADCTFEELCERPLGASDYLELSKNFDTVFVRNIPQFSMAKRTEARRFITLIDNFYDYKVRIICCASAPIPSLFLHQHHDSELEQSRILMDDLGLSQDSAGLSMFTGEEEVFAFHRTVSRLTEMQTEQYWVEGDRSKK
SIO_010081: Afg1l
subclass of: SO_0000673
so part of: Afg1l
location: join(6715310..6715397,6716530..6716660,6725184..6725283,6742300..6742358,6775397..6775479,6795314..6795384,6795641..6795741,6825841..6825981,6829107..6829220,6831336..6831461)
location: region:6715310-6831461:1
so has part: feature:6715310-6715397:1:exon
so has part: feature:6716530-6716660:1:exon
so has part: feature:6725184-6725283:1:exon
so has part: feature:6742300-6742358:1:exon
so has part: feature:6775397-6775479:1:exon
so has part: feature:6795314-6795384:1:exon
so has part: feature:6795641-6795741:1:exon
so has part: feature:6825841-6825981:1:exon
so has part: feature:6829107-6829220:1:exon
so has part: feature:6831336-6831461:1:exon

XP_028746093.1
type: Protein
SIO_000068: ncbiprotein

position:6715310:1
position: 6715310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6715310-6715397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6716530-6716660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6725184-6725283:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6742300-6742358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6775397-6775479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6795314-6795384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6795641-6795741:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6825841-6825981:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6829107-6829220:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6831336-6831461:1:exon

LOC119086879
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119086879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6850456..6861417
location: region:6850456-6861417:1
so has part: feature:6850456-6861417:1:exon
subclass of: SO_0000011

119086879
type: Gene
SIO_000068: ncbigene

position:6850456:1
position: 6850456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6861417:1
position: 6861417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6850456-6861417:1:exon

LOC119086879
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119086879
product: uncharacterized LOC119086879
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005090264.1
SIO_010081: LOC119086879
subclass of: SO_0000673
so part of: LOC119086879
location: join(6850456..6850985,6854232..6854396,6861323..6861417)
location: region:6850456-6861417:1
so has part: feature:6850456-6850985:1:exon
so has part: feature:6854232-6854396:1:exon
so has part: feature:6861323-6861417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6850456-6850985:1:exon

position:6850985:1
position: 6850985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6854232-6854396:1:exon

position:6854232:1
position: 6854232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6854396:1
position: 6854396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6861323-6861417:1:exon

position:6861323:1
position: 6861323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Foxo3
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Foxo3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6880654..6977060
location: region:6880654-6977060:1
so has part: feature:6880654-6977060:1:exon
subclass of: SO_0000010

114707517
type: Gene
SIO_000068: ncbigene

position:6880654:1
position: 6880654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6977060:1
position: 6977060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6880654-6977060:1:exon

Foxo3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Foxo3
product: forkhead box O3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XM_028890255.2
SIO_010081: Foxo3
subclass of: SO_0000673
so part of: Foxo3
location: join(6880654..6881546,6962357..6963796,6976967..6977060)
location: region:6880654-6977060:1
so has part: feature:6880654-6881546:1:exon
so has part: feature:6962357-6963796:1:exon
so has part: feature:6976967-6977060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6880654-6881546:1:exon

position:6881546:1
position: 6881546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6962357-6963796:1:exon

position:6962357:1
position: 6962357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6963796:1
position: 6963796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6976967-6977060:1:exon

position:6976967:1
position: 6976967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Foxo3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Foxo3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: forkhead box protein O3
translation: MAEAPASPVPLSPLEVELDPEFEPQSRPRSCTWPLQRPELQASPAKPSGETAADSMIPEEDDDEDDEDGGGRASSAMVIGGGLSSTLGSGLLLEDSARLLAPGGQDLGSGPASAAGALSGGTQTPLQPQQPLPPPQPGAAGGSGQPRKCSSRRNAWGNLSYADLITRAIESSPDKRLTLSQIYEWMVRCVPYFKDKGDSNSSAGWKNSIRHNLSLHSRFMRVQNEGTGKSSWWIINPDGGKSGKAPRRRAVSMDNSNKYTKSRGRAAKKKAALQAAPESAGADDSPAQLSKWPGSPTSRSSDELDAWTDFRSRTNSNASTVSGRLSPILASAELDDVQDDDAPLSPMLYSSSASLSPSVSKPCTVELPRLTDMAGTMNLNDGLSDNLMDDLLDNITLPPSQPSPPGGLMQRSSSFPYTAKSSGLGSPTSSFSSTVFGPSSLNSLRQAPMQTIQENKPATFSSMAHYGNQTLQDLLTSDSLSHSDVMMTQSDPLMSQASSAVSAQNARRNVMLRNDPMMSFAAQPPQGSLVNQNLLHHQHQNQGALGGSRALSNSVSNMGLSDSSSLGXAKHQQQSHVSQSMQTLSDSLSGSSLYSASANLPVLGHDKFPSDLDLDMFNGSLECDMESIIRSELMDADGLDFNFDSLISSQNVVGLNVGNFTGAKQASSQSWVPG
SIO_010081: Foxo3
subclass of: SO_0000673
so part of: Foxo3
location: join(6880929..6881546,6962357..6963762)
location: region:6880929-6963762:1
so has part: feature:6880929-6881546:1:exon
so has part: feature:6962357-6963762:1:exon

XP_028746088.1
type: Protein
SIO_000068: ncbiprotein

position:6880929:1
position: 6880929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6963762:1
position: 6963762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6880929-6881546:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6962357-6963762:1:exon

Armc2
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Armc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7146611..7268013
location: region:7146611-7268013:1
so has part: feature:7146611-7268013:1:exon
subclass of: SO_0000010

114707516
type: Gene
SIO_000068: ncbigene

position:7146611:1
position: 7146611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7268013:1
position: 7268013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7146611-7268013:1:exon

Armc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Armc2
product: armadillo repeat containing 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_028890253.2
SIO_010081: Armc2
subclass of: SO_0000673
so part of: Armc2
location: join(7146611..7146702,7153537..7153792,7158798..7158870,7171746..7171917,7179958..7180150,7192305..7192381,7197665..7197763,7201451..7201622,7206453..7206555,7208230..7208453,7223425..7223570,7228060..7228159,7255427..7255727,7258168..7258290,7258939..7259052,7260037..7260169,7260469..7260629,7267611..7268013)
location: region:7146611-7268013:1
so has part: feature:7146611-7146702:1:exon
so has part: feature:7153537-7153792:1:exon
so has part: feature:7158798-7158870:1:exon
so has part: feature:7171746-7171917:1:exon
so has part: feature:7179958-7180150:1:exon
so has part: feature:7192305-7192381:1:exon
so has part: feature:7197665-7197763:1:exon
so has part: feature:7201451-7201622:1:exon
so has part: feature:7206453-7206555:1:exon
so has part: feature:7208230-7208453:1:exon
so has part: feature:7223425-7223570:1:exon
so has part: feature:7228060-7228159:1:exon
so has part: feature:7255427-7255727:1:exon
so has part: feature:7258168-7258290:1:exon
so has part: feature:7258939-7259052:1:exon
so has part: feature:7260037-7260169:1:exon
so has part: feature:7260469-7260629:1:exon
so has part: feature:7267611-7268013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7146611-7146702:1:exon

position:7146702:1
position: 7146702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7153537-7153792:1:exon

position:7153537:1
position: 7153537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7153792:1
position: 7153792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7158798-7158870:1:exon

position:7158798:1
position: 7158798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7158870:1
position: 7158870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7171746-7171917:1:exon

position:7171746:1
position: 7171746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7171917:1
position: 7171917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7179958-7180150:1:exon

position:7179958:1
position: 7179958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7180150:1
position: 7180150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7192305-7192381:1:exon

position:7192305:1
position: 7192305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7192381:1
position: 7192381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7197665-7197763:1:exon

position:7197665:1
position: 7197665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7197763:1
position: 7197763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7201451-7201622:1:exon

position:7201451:1
position: 7201451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7201622:1
position: 7201622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7206453-7206555:1:exon

position:7206453:1
position: 7206453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7206555:1
position: 7206555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7208230-7208453:1:exon

position:7208230:1
position: 7208230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7208453:1
position: 7208453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7223425-7223570:1:exon

position:7223425:1
position: 7223425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7223570:1
position: 7223570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7228060-7228159:1:exon

position:7228060:1
position: 7228060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7228159:1
position: 7228159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7255427-7255727:1:exon

position:7255427:1
position: 7255427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7255727:1
position: 7255727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7258168-7258290:1:exon

position:7258168:1
position: 7258168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7258290:1
position: 7258290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7258939-7259052:1:exon

position:7258939:1
position: 7258939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7259052:1
position: 7259052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7260037-7260169:1:exon

position:7260037:1
position: 7260037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7260169:1
position: 7260169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7260469-7260629:1:exon

position:7260469:1
position: 7260469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7260629:1
position: 7260629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7267611-7268013:1:exon

position:7267611:1
position: 7267611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Armc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Armc2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: armadillo repeat-containing protein 2
translation: MLRRSALTWTDGGAGFALSDRAAFRVGGCVSEDRFKLKGKMLSSNDQKLEKLDPFHRPLLSKQKTSAEIINEARNALRSVRTQRPFTPREDQRKLFGPASSRTPENRPPSSFSLHASSFELADSRPISGTRLSPLELKPRAPASPTTEEDACPSLPKPPLDPVKIRRISGGRSRFYRAASQGTLLPDRSPAAAPSKTTEDSKETVSVENSAAKINGTYLTASNAIGHLKSHPPQRTYDQGFRETKEVSKEPPSHLRSGGDQGKRPARASSCPSSSDLSRLETRAASRASLQEQETEIEVDEVFWKTRIEPLLHELEKEDIEAMCAACSQLHHTLEEGRMLGRKFRXRSVLLKTLYKLVDAGSDSLSLKLAKLILALKVSRKNLLNVCKLVFKISRSEENDVLLQNDNILDSLLEVLRGEDLPSNTEAFLYCMGALKFISGSPAFLPEMIGKGAVEILTKLIRQTSEDTKKRGACLPNAGNLLVQTTATLRNLADSPLTRSRLLKVGAFPPLCTVMEQYMDDKDVCTNIARIFSKLTSYHDCCAALASYSRCYALFLSLLNKYQKKQDLVIRIVFILGNLTAKNNQAREVFSRERGSIETLLTLFQNFYQLDQHPPRLGPSGASPAAEAEDVLVKLTRVLANVAIHPRVGPALAADPRVVGLLLTTLESKSLGDCEELVINATAALNNLSFYQVKSSVLQHKKLYVAELLLKLLVSNNMDGILEAVRVFGNLSQDHDVCNFLMQKNVHKFMIALLEAKHQDICFAACGVLLNLTVDKDKRAILKEGGGIKKLVDCLREFGPGDWQLACLVCKTLWNFSENITSASLCFGDEDANRLLVLLPSFLDEELALNGSFDQDLRSYHRLHWETEFKPVAQQLLKRIQSHHTPLEPLPTPSF
SIO_010081: Armc2
subclass of: SO_0000673
so part of: Armc2
location: join(7146621..7146702,7153537..7153792,7158798..7158870,7171746..7171917,7179958..7180150,7192305..7192381,7197665..7197763,7201451..7201622,7206453..7206555,7208230..7208453,7223425..7223570,7228060..7228159,7255427..7255727,7258168..7258290,7258939..7259052,7260037..7260169,7260469..7260629,7267611..7267768)
location: region:7146621-7267768:1
so has part: feature:7146621-7146702:1:exon
so has part: feature:7153537-7153792:1:exon
so has part: feature:7158798-7158870:1:exon
so has part: feature:7171746-7171917:1:exon
so has part: feature:7179958-7180150:1:exon
so has part: feature:7192305-7192381:1:exon
so has part: feature:7197665-7197763:1:exon
so has part: feature:7201451-7201622:1:exon
so has part: feature:7206453-7206555:1:exon
so has part: feature:7208230-7208453:1:exon
so has part: feature:7223425-7223570:1:exon
so has part: feature:7228060-7228159:1:exon
so has part: feature:7255427-7255727:1:exon
so has part: feature:7258168-7258290:1:exon
so has part: feature:7258939-7259052:1:exon
so has part: feature:7260037-7260169:1:exon
so has part: feature:7260469-7260629:1:exon
so has part: feature:7267611-7267768:1:exon

XP_028746086.2
type: Protein
SIO_000068: ncbiprotein

position:7146621:1
position: 7146621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7267768:1
position: 7267768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7146621-7146702:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7153537-7153792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7158798-7158870:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7171746-7171917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7179958-7180150:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7192305-7192381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7197665-7197763:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7201451-7201622:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7206453-7206555:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7208230-7208453:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7223425-7223570:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7228060-7228159:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7255427-7255727:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7258168-7258290:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7258939-7259052:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7260037-7260169:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7260469-7260629:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7267611-7267768:1:exon

Sesn1
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Sesn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7288429..7386843)
location: region:7288429-7386843:-1
so has part: feature:7288429-7386843:-1:exon
subclass of: SO_0000010

114707519
type: Gene
SIO_000068: ncbigene

position:7288429:-1
position: 7288429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7386843:-1
position: 7386843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7288429-7386843:-1:exon

Sesn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Sesn1
product: sestrin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_028890256.2
SIO_010081: Sesn1
subclass of: SO_0000673
so part of: Sesn1
location: complement(join(7288429..7289235,7289895..7290039,7291293..7291483,7292892..7293004,7293880..7294027,7298863..7299105,7300996..7301178,7302198..7302398,7303157..7303222,7385796..7386843))
location: region:7288429-7386843:-1
so has part: feature:7385796-7386843:-1:exon
so has part: feature:7303157-7303222:-1:exon
so has part: feature:7302198-7302398:-1:exon
so has part: feature:7300996-7301178:-1:exon
so has part: feature:7298863-7299105:-1:exon
so has part: feature:7293880-7294027:-1:exon
so has part: feature:7292892-7293004:-1:exon
so has part: feature:7291293-7291483:-1:exon
so has part: feature:7289895-7290039:-1:exon
so has part: feature:7288429-7289235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7385796-7386843:-1:exon

position:7385796:-1
position: 7385796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7303157-7303222:-1:exon

position:7303157:-1
position: 7303157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7303222:-1
position: 7303222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7302198-7302398:-1:exon

position:7302198:-1
position: 7302198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7302398:-1
position: 7302398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7300996-7301178:-1:exon

position:7300996:-1
position: 7300996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7301178:-1
position: 7301178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7298863-7299105:-1:exon

position:7298863:-1
position: 7298863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7299105:-1
position: 7299105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7293880-7294027:-1:exon

position:7293880:-1
position: 7293880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7294027:-1
position: 7294027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7292892-7293004:-1:exon

position:7292892:-1
position: 7292892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7293004:-1
position: 7293004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7291293-7291483:-1:exon

position:7291293:-1
position: 7291293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7291483:-1
position: 7291483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7289895-7290039:-1:exon

position:7289895:-1
position: 7289895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7290039:-1
position: 7290039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7288429-7289235:-1:exon

position:7289235:-1
position: 7289235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Sesn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Sesn1
product: sestrin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XM_028890257.2
SIO_010081: Sesn1
subclass of: SO_0000673
so part of: Sesn1
location: complement(join(7288429..7289235,7289895..7290039,7291293..7291483,7292892..7293004,7293880..7294027,7298863..7299105,7300996..7301178,7302198..7302398,7303157..7303222,7310730..7310887))
location: region:7288429-7310887:-1
so has part: feature:7310730-7310887:-1:exon
so has part: feature:7303157-7303222:-1:exon
so has part: feature:7302198-7302398:-1:exon
so has part: feature:7300996-7301178:-1:exon
so has part: feature:7298863-7299105:-1:exon
so has part: feature:7293880-7294027:-1:exon
so has part: feature:7292892-7293004:-1:exon
so has part: feature:7291293-7291483:-1:exon
so has part: feature:7289895-7290039:-1:exon
so has part: feature:7288429-7289235:-1:exon

position:7310887:-1
position: 7310887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7310730-7310887:-1:exon

position:7310730:-1
position: 7310730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7303157-7303222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7302198-7302398:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7300996-7301178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7298863-7299105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7293880-7294027:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7292892-7293004:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7291293-7291483:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7289895-7290039:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7288429-7289235:-1:exon

Sesn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Sesn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sestrin-1 isoform X1
translation: MAEGENEVRWDGLCSRDSAVRETALENIRQIVLRKTEYLRSVKEPLYRPPDGLSNAVSSDGMNKLLAHLLMLSKRCPFKDVRERSGFILKSVEELGIRIPRPLGHGPSRFIPEKEILQVGSEDAQMHAVFADSFAALGRLDNITLVMVFHPQYLESFLKTQHYLLQMDGPLPLHYRHYIGIMAAARHQCSYLVNLHVNDFLHVGGDPKWLNGLENAPQKLQNLGELNKVLAHRPWLITKEHIEGLLKAEEHSWSLAELVHAVVLLTHYHSLASFTFGCGISPEIHCDGGHTFRPPSVSNYCICDITNGNHSVDEMQVSSAGNISVSESFFEVEALMEKMRQLQECRDEEEASQEEMASRFEMEKNESMLVFSSDDDEVTPARDISRHFEDTSYGYKDFSRHGMHVPTFRVQDYCWEDHGYSLVNRLYPDVGQLIDEKFHIAYNLTYNTMAMHKDVDTSMLRRAIWNYIHCMFGIRYDDYDYGEINQLLDRSFKVYIKTVVCTPEKVTKRMYDSFWRQFKHSEKVHVNLLLIEARMQAELLYALRAITRYMT
SIO_010081: Sesn1
subclass of: SO_0000673
so part of: Sesn1
location: complement(join(7289149..7289235,7289895..7290039,7291293..7291483,7292892..7293004,7293880..7294027,7298863..7299105,7300996..7301178,7302198..7302398,7303157..7303222,7385796..7386074))
location: region:7289149-7386074:-1
so has part: feature:7385796-7386074:-1:exon
so has part: feature:7303157-7303222:-1:exon
so has part: feature:7302198-7302398:-1:exon
so has part: feature:7300996-7301178:-1:exon
so has part: feature:7298863-7299105:-1:exon
so has part: feature:7293880-7294027:-1:exon
so has part: feature:7292892-7293004:-1:exon
so has part: feature:7291293-7291483:-1:exon
so has part: feature:7289895-7290039:-1:exon
so has part: feature:7289149-7289235:-1:exon

XP_028746089.1
type: Protein
SIO_000068: ncbiprotein

position:7289149:-1
position: 7289149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7386074:-1
position: 7386074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7385796-7386074:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7303157-7303222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7302198-7302398:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7300996-7301178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7298863-7299105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7293880-7294027:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7292892-7293004:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7291293-7291483:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7289895-7290039:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7289149-7289235:-1:exon

Sesn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Sesn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sestrin-1 isoform X2
translation: MRLAAAANEAYTASLAVTELLGCHQCGGGRGQDEELGIRIPRPLGHGPSRFIPEKEILQVGSEDAQMHAVFADSFAALGRLDNITLVMVFHPQYLESFLKTQHYLLQMDGPLPLHYRHYIGIMAAARHQCSYLVNLHVNDFLHVGGDPKWLNGLENAPQKLQNLGELNKVLAHRPWLITKEHIEGLLKAEEHSWSLAELVHAVVLLTHYHSLASFTFGCGISPEIHCDGGHTFRPPSVSNYCICDITNGNHSVDEMQVSSAGNISVSESFFEVEALMEKMRQLQECRDEEEASQEEMASRFEMEKNESMLVFSSDDDEVTPARDISRHFEDTSYGYKDFSRHGMHVPTFRVQDYCWEDHGYSLVNRLYPDVGQLIDEKFHIAYNLTYNTMAMHKDVDTSMLRRAIWNYIHCMFGIRYDDYDYGEINQLLDRSFKVYIKTVVCTPEKVTKRMYDSFWRQFKHSEKVHVNLLLIEARMQAELLYALRAITRYMT
SIO_010081: Sesn1
subclass of: SO_0000673
so part of: Sesn1
location: complement(join(7289149..7289235,7289895..7290039,7291293..7291483,7292892..7293004,7293880..7294027,7298863..7299105,7300996..7301178,7302198..7302398,7303157..7303222,7310730..7310831))
location: region:7289149-7310831:-1
so has part: feature:7310730-7310831:-1:exon
so has part: feature:7303157-7303222:-1:exon
so has part: feature:7302198-7302398:-1:exon
so has part: feature:7300996-7301178:-1:exon
so has part: feature:7298863-7299105:-1:exon
so has part: feature:7293880-7294027:-1:exon
so has part: feature:7292892-7293004:-1:exon
so has part: feature:7291293-7291483:-1:exon
so has part: feature:7289895-7290039:-1:exon
so has part: feature:7289149-7289235:-1:exon

XP_028746090.1
type: Protein
SIO_000068: ncbiprotein

position:7310831:-1
position: 7310831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7310730-7310831:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7303157-7303222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7302198-7302398:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7300996-7301178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7298863-7299105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7293880-7294027:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7292892-7293004:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7291293-7291483:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7289895-7290039:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7289149-7289235:-1:exon

LOC114707520
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114707520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7347355..7348778
location: region:7347355-7348778:1
so has part: feature:7347355-7348778:1:exon

114707520
type: Gene
SIO_000068: ncbigene

position:7347355:1
position: 7347355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7348778:1
position: 7348778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7347355-7348778:1:exon

LOC114707520
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114707520
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114707520
subclass of: SO_0000673
so part of: LOC114707520
location: 7347355..7348778
location: region:7347355-7348778:1
so has part: feature:7347355-7348778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7347355-7348778:1:exon

Cep57l1
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Cep57l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7387124..7450127
location: region:7387124-7450127:1
so has part: feature:7387124-7450127:1:exon
subclass of: SO_0000010

114707503
type: Gene
SIO_000068: ncbigene

position:7387124:1
position: 7387124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7450127:1
position: 7450127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7387124-7450127:1:exon

Cep57l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cep57l1
product: centrosomal protein 57 like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037200332.1
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(7387124..7387214,7423951..7424170,7425039..7425201,7426591..7426770,7428595..7428716,7438773..7438889,7440275..7440352,7441007..7441093,7444408..7444485,7444979..7445172,7446539..7446683,7449063..7449275)
location: region:7387124-7449275:1
so has part: feature:7387124-7387214:1:exon
so has part: feature:7423951-7424170:1:exon
so has part: feature:7425039-7425201:1:exon
so has part: feature:7426591-7426770:1:exon
so has part: feature:7428595-7428716:1:exon
so has part: feature:7438773-7438889:1:exon
so has part: feature:7440275-7440352:1:exon
so has part: feature:7441007-7441093:1:exon
so has part: feature:7444408-7444485:1:exon
so has part: feature:7444979-7445172:1:exon
so has part: feature:7446539-7446683:1:exon
so has part: feature:7449063-7449275:1:exon

position:7449275:1
position: 7449275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7387124-7387214:1:exon

position:7387214:1
position: 7387214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7423951-7424170:1:exon

position:7423951:1
position: 7423951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7424170:1
position: 7424170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7425039-7425201:1:exon

position:7425039:1
position: 7425039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7425201:1
position: 7425201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7426591-7426770:1:exon

position:7426591:1
position: 7426591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7426770:1
position: 7426770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7428595-7428716:1:exon

position:7428595:1
position: 7428595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7428716:1
position: 7428716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7438773-7438889:1:exon

position:7438773:1
position: 7438773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7438889:1
position: 7438889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7440275-7440352:1:exon

position:7440275:1
position: 7440275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7440352:1
position: 7440352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7441007-7441093:1:exon

position:7441007:1
position: 7441007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7441093:1
position: 7441093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7444408-7444485:1:exon

position:7444408:1
position: 7444408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7444485:1
position: 7444485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7444979-7445172:1:exon

position:7444979:1
position: 7444979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7445172:1
position: 7445172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7446539-7446683:1:exon

position:7446539:1
position: 7446539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7446683:1
position: 7446683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7449063-7449275:1:exon

position:7449063:1
position: 7449063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cep57l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cep57l1
product: centrosomal protein 57 like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037200331.1
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(7387136..7387237,7423951..7424170,7425039..7425201,7426591..7426770,7428595..7428716,7438773..7438889,7440275..7440352,7441007..7441093,7444408..7444485,7444979..7445172,7446539..7446683,7449063..7450127)
location: region:7387136-7450127:1
so has part: feature:7387136-7387237:1:exon
so has part: feature:7423951-7424170:1:exon
so has part: feature:7425039-7425201:1:exon
so has part: feature:7426591-7426770:1:exon
so has part: feature:7428595-7428716:1:exon
so has part: feature:7438773-7438889:1:exon
so has part: feature:7440275-7440352:1:exon
so has part: feature:7441007-7441093:1:exon
so has part: feature:7444408-7444485:1:exon
so has part: feature:7444979-7445172:1:exon
so has part: feature:7446539-7446683:1:exon
so has part: feature:7449063-7450127:1:exon

position:7387136:1
position: 7387136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7387136-7387237:1:exon

position:7387237:1
position: 7387237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7423951-7424170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7425039-7425201:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7426591-7426770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7428595-7428716:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7438773-7438889:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7440275-7440352:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7441007-7441093:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7444408-7444485:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7444979-7445172:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7446539-7446683:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7449063-7450127:1:exon

Cep57l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cep57l1
product: centrosomal protein 57 like 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037200333.1
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(7387138..7387237,7425039..7425201,7426591..7426770,7428595..7428716,7438773..7438889,7440275..7440352,7441007..7441093,7444408..7444485,7444979..7445172,7446539..7446683,7449063..7449275)
location: region:7387138-7449275:1
so has part: feature:7387138-7387237:1:exon
so has part: feature:7425039-7425201:1:exon
so has part: feature:7426591-7426770:1:exon
so has part: feature:7428595-7428716:1:exon
so has part: feature:7438773-7438889:1:exon
so has part: feature:7440275-7440352:1:exon
so has part: feature:7441007-7441093:1:exon
so has part: feature:7444408-7444485:1:exon
so has part: feature:7444979-7445172:1:exon
so has part: feature:7446539-7446683:1:exon
so has part: feature:7449063-7449275:1:exon

position:7387138:1
position: 7387138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7387138-7387237:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7425039-7425201:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7426591-7426770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7428595-7428716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7438773-7438889:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7440275-7440352:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7441007-7441093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7444408-7444485:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7444979-7445172:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7446539-7446683:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7449063-7449275:1:exon

Cep57l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cep57l1
product: centrosomal protein 57 like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_028890236.2
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(7387444..7387535,7423951..7424170,7425039..7425201,7426591..7426770,7428595..7428716,7438773..7438889,7440275..7440352,7441007..7441093,7444408..7444485,7444979..7445172,7446539..7446683,7449063..7449275)
location: region:7387444-7449275:1
so has part: feature:7387444-7387535:1:exon
so has part: feature:7423951-7424170:1:exon
so has part: feature:7425039-7425201:1:exon
so has part: feature:7426591-7426770:1:exon
so has part: feature:7428595-7428716:1:exon
so has part: feature:7438773-7438889:1:exon
so has part: feature:7440275-7440352:1:exon
so has part: feature:7441007-7441093:1:exon
so has part: feature:7444408-7444485:1:exon
so has part: feature:7444979-7445172:1:exon
so has part: feature:7446539-7446683:1:exon
so has part: feature:7449063-7449275:1:exon

position:7387444:1
position: 7387444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7387444-7387535:1:exon

position:7387535:1
position: 7387535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7423951-7424170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7425039-7425201:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7426591-7426770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7428595-7428716:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7438773-7438889:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7440275-7440352:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7441007-7441093:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7444408-7444485:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7444979-7445172:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7446539-7446683:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7449063-7449275:1:exon

Cep57l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cep57l1
product: centrosomal protein 57 like 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_028890237.2
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(7387453..7387535,7425039..7425201,7426591..7426770,7428595..7428716,7438773..7438889,7440275..7440352,7441007..7441093,7444408..7444485,7444979..7445172,7446539..7446683,7449063..7449275)
location: region:7387453-7449275:1
so has part: feature:7387453-7387535:1:exon
so has part: feature:7425039-7425201:1:exon
so has part: feature:7426591-7426770:1:exon
so has part: feature:7428595-7428716:1:exon
so has part: feature:7438773-7438889:1:exon
so has part: feature:7440275-7440352:1:exon
so has part: feature:7441007-7441093:1:exon
so has part: feature:7444408-7444485:1:exon
so has part: feature:7444979-7445172:1:exon
so has part: feature:7446539-7446683:1:exon
so has part: feature:7449063-7449275:1:exon

position:7387453:1
position: 7387453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7387453-7387535:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7425039-7425201:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7426591-7426770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7428595-7428716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7438773-7438889:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7440275-7440352:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7441007-7441093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7444408-7444485:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7444979-7445172:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7446539-7446683:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7449063-7449275:1:exon

Cep57l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cep57l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein CEP57L1 isoform X1
translation: MDSELSQSVIGSYLNPPERIYLPSFTQNEASQNCHPVNSEVTSPKMFNSPNNQALVSALKTLQEKIYRLELERTQAEDNLNSLSREAAQYKKALENETNERNLAHQELIKQKKDISIQLSSAQSRCVLLEKQLEYTKRMVLNVEREKAMILEQQAQLQREKEEDQLKLHAKLAKLDVLEQECFRLTTTQQTAEDKIKYLEEKLKEEEHQRKLFQDKACELQTGLEISKILMSTVSHSQHCKEKKKPPKKTKCLKREPPQQMDPRFRALFLEREKMVHPHGLYYLQKPVLVPEAQSLYKALRTSSQAKVLPLNSGDTVSTCDNLSELLMAMQEELDQMIVEHRELQKQMLQAGSHSLSDDAEHALEQLVRKMESKGDQISKLKKHQDSVRKLQQRVQSSRTNEPSIHWEAGKPKGPKKNSPRKCLNETNPFQKNSSVHPVQVHNLQVKLRRDDIQWEQ
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(7425042..7425201,7426591..7426770,7428595..7428716,7438773..7438889,7440275..7440352,7441007..7441093,7444408..7444485,7444979..7445172,7446539..7446683,7449063..7449275)
location: region:7425042-7449275:1
so has part: feature:7425042-7425201:1:exon
so has part: feature:7426591-7426770:1:exon
so has part: feature:7428595-7428716:1:exon
so has part: feature:7438773-7438889:1:exon
so has part: feature:7440275-7440352:1:exon
so has part: feature:7441007-7441093:1:exon
so has part: feature:7444408-7444485:1:exon
so has part: feature:7444979-7445172:1:exon
so has part: feature:7446539-7446683:1:exon
so has part: feature:7449063-7449275:1:exon

XP_028746069.1
type: Protein
SIO_000068: ncbiprotein

position:7425042:1
position: 7425042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7425042-7425201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7426591-7426770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7428595-7428716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7438773-7438889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7440275-7440352:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7441007-7441093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7444408-7444485:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7444979-7445172:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7446539-7446683:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7449063-7449275:1:exon

Cep57l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cep57l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein CEP57L1 isoform X1
translation: MDSELSQSVIGSYLNPPERIYLPSFTQNEASQNCHPVNSEVTSPKMFNSPNNQALVSALKTLQEKIYRLELERTQAEDNLNSLSREAAQYKKALENETNERNLAHQELIKQKKDISIQLSSAQSRCVLLEKQLEYTKRMVLNVEREKAMILEQQAQLQREKEEDQLKLHAKLAKLDVLEQECFRLTTTQQTAEDKIKYLEEKLKEEEHQRKLFQDKACELQTGLEISKILMSTVSHSQHCKEKKKPPKKTKCLKREPPQQMDPRFRALFLEREKMVHPHGLYYLQKPVLVPEAQSLYKALRTSSQAKVLPLNSGDTVSTCDNLSELLMAMQEELDQMIVEHRELQKQMLQAGSHSLSDDAEHALEQLVRKMESKGDQISKLKKHQDSVRKLQQRVQSSRTNEPSIHWEAGKPKGPKKNSPRKCLNETNPFQKNSSVHPVQVHNLQVKLRRDDIQWEQ
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(7425042..7425201,7426591..7426770,7428595..7428716,7438773..7438889,7440275..7440352,7441007..7441093,7444408..7444485,7444979..7445172,7446539..7446683,7449063..7449275)
location: region:7425042-7449275:1
so has part: feature:7425042-7425201:1:exon
so has part: feature:7426591-7426770:1:exon
so has part: feature:7428595-7428716:1:exon
so has part: feature:7438773-7438889:1:exon
so has part: feature:7440275-7440352:1:exon
so has part: feature:7441007-7441093:1:exon
so has part: feature:7444408-7444485:1:exon
so has part: feature:7444979-7445172:1:exon
so has part: feature:7446539-7446683:1:exon
so has part: feature:7449063-7449275:1:exon

XP_028746070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7425042-7425201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7426591-7426770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7428595-7428716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7438773-7438889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7440275-7440352:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7441007-7441093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7444408-7444485:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7444979-7445172:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7446539-7446683:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7449063-7449275:1:exon

Cep57l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cep57l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein CEP57L1 isoform X1
translation: MDSELSQSVIGSYLNPPERIYLPSFTQNEASQNCHPVNSEVTSPKMFNSPNNQALVSALKTLQEKIYRLELERTQAEDNLNSLSREAAQYKKALENETNERNLAHQELIKQKKDISIQLSSAQSRCVLLEKQLEYTKRMVLNVEREKAMILEQQAQLQREKEEDQLKLHAKLAKLDVLEQECFRLTTTQQTAEDKIKYLEEKLKEEEHQRKLFQDKACELQTGLEISKILMSTVSHSQHCKEKKKPPKKTKCLKREPPQQMDPRFRALFLEREKMVHPHGLYYLQKPVLVPEAQSLYKALRTSSQAKVLPLNSGDTVSTCDNLSELLMAMQEELDQMIVEHRELQKQMLQAGSHSLSDDAEHALEQLVRKMESKGDQISKLKKHQDSVRKLQQRVQSSRTNEPSIHWEAGKPKGPKKNSPRKCLNETNPFQKNSSVHPVQVHNLQVKLRRDDIQWEQ
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(7425042..7425201,7426591..7426770,7428595..7428716,7438773..7438889,7440275..7440352,7441007..7441093,7444408..7444485,7444979..7445172,7446539..7446683,7449063..7449275)
location: region:7425042-7449275:1
so has part: feature:7425042-7425201:1:exon
so has part: feature:7426591-7426770:1:exon
so has part: feature:7428595-7428716:1:exon
so has part: feature:7438773-7438889:1:exon
so has part: feature:7440275-7440352:1:exon
so has part: feature:7441007-7441093:1:exon
so has part: feature:7444408-7444485:1:exon
so has part: feature:7444979-7445172:1:exon
so has part: feature:7446539-7446683:1:exon
so has part: feature:7449063-7449275:1:exon

XP_037056226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7425042-7425201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7426591-7426770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7428595-7428716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7438773-7438889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7440275-7440352:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7441007-7441093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7444408-7444485:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7444979-7445172:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7446539-7446683:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7449063-7449275:1:exon

Cep57l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cep57l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein CEP57L1 isoform X1
translation: MDSELSQSVIGSYLNPPERIYLPSFTQNEASQNCHPVNSEVTSPKMFNSPNNQALVSALKTLQEKIYRLELERTQAEDNLNSLSREAAQYKKALENETNERNLAHQELIKQKKDISIQLSSAQSRCVLLEKQLEYTKRMVLNVEREKAMILEQQAQLQREKEEDQLKLHAKLAKLDVLEQECFRLTTTQQTAEDKIKYLEEKLKEEEHQRKLFQDKACELQTGLEISKILMSTVSHSQHCKEKKKPPKKTKCLKREPPQQMDPRFRALFLEREKMVHPHGLYYLQKPVLVPEAQSLYKALRTSSQAKVLPLNSGDTVSTCDNLSELLMAMQEELDQMIVEHRELQKQMLQAGSHSLSDDAEHALEQLVRKMESKGDQISKLKKHQDSVRKLQQRVQSSRTNEPSIHWEAGKPKGPKKNSPRKCLNETNPFQKNSSVHPVQVHNLQVKLRRDDIQWEQ
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(7425042..7425201,7426591..7426770,7428595..7428716,7438773..7438889,7440275..7440352,7441007..7441093,7444408..7444485,7444979..7445172,7446539..7446683,7449063..7449275)
location: region:7425042-7449275:1
so has part: feature:7425042-7425201:1:exon
so has part: feature:7426591-7426770:1:exon
so has part: feature:7428595-7428716:1:exon
so has part: feature:7438773-7438889:1:exon
so has part: feature:7440275-7440352:1:exon
so has part: feature:7441007-7441093:1:exon
so has part: feature:7444408-7444485:1:exon
so has part: feature:7444979-7445172:1:exon
so has part: feature:7446539-7446683:1:exon
so has part: feature:7449063-7449275:1:exon

XP_037056227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7425042-7425201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7426591-7426770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7428595-7428716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7438773-7438889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7440275-7440352:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7441007-7441093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7444408-7444485:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7444979-7445172:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7446539-7446683:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7449063-7449275:1:exon

Cep57l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cep57l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein CEP57L1 isoform X1
translation: MDSELSQSVIGSYLNPPERIYLPSFTQNEASQNCHPVNSEVTSPKMFNSPNNQALVSALKTLQEKIYRLELERTQAEDNLNSLSREAAQYKKALENETNERNLAHQELIKQKKDISIQLSSAQSRCVLLEKQLEYTKRMVLNVEREKAMILEQQAQLQREKEEDQLKLHAKLAKLDVLEQECFRLTTTQQTAEDKIKYLEEKLKEEEHQRKLFQDKACELQTGLEISKILMSTVSHSQHCKEKKKPPKKTKCLKREPPQQMDPRFRALFLEREKMVHPHGLYYLQKPVLVPEAQSLYKALRTSSQAKVLPLNSGDTVSTCDNLSELLMAMQEELDQMIVEHRELQKQMLQAGSHSLSDDAEHALEQLVRKMESKGDQISKLKKHQDSVRKLQQRVQSSRTNEPSIHWEAGKPKGPKKNSPRKCLNETNPFQKNSSVHPVQVHNLQVKLRRDDIQWEQ
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(7425042..7425201,7426591..7426770,7428595..7428716,7438773..7438889,7440275..7440352,7441007..7441093,7444408..7444485,7444979..7445172,7446539..7446683,7449063..7449275)
location: region:7425042-7449275:1
so has part: feature:7425042-7425201:1:exon
so has part: feature:7426591-7426770:1:exon
so has part: feature:7428595-7428716:1:exon
so has part: feature:7438773-7438889:1:exon
so has part: feature:7440275-7440352:1:exon
so has part: feature:7441007-7441093:1:exon
so has part: feature:7444408-7444485:1:exon
so has part: feature:7444979-7445172:1:exon
so has part: feature:7446539-7446683:1:exon
so has part: feature:7449063-7449275:1:exon

XP_037056228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7425042-7425201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7426591-7426770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7428595-7428716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7438773-7438889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7440275-7440352:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7441007-7441093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7444408-7444485:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7444979-7445172:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7446539-7446683:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7449063-7449275:1:exon

Cep57l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cep57l1
product: centrosomal protein 57 like 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_028890239.1
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(7428632..7428716,7437179..7437185,7438773..7438889,7440275..7440352,7441007..7441093,7444408..7444485,7444979..7445172,7446539..7446683,7449063..7449275)
location: region:7428632-7449275:1
so has part: feature:7428632-7428716:1:exon
so has part: feature:7437179-7437185:1:exon
so has part: feature:7438773-7438889:1:exon
so has part: feature:7440275-7440352:1:exon
so has part: feature:7441007-7441093:1:exon
so has part: feature:7444408-7444485:1:exon
so has part: feature:7444979-7445172:1:exon
so has part: feature:7446539-7446683:1:exon
so has part: feature:7449063-7449275:1:exon

position:7428632:1
position: 7428632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7428632-7428716:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7437179-7437185:1:exon

position:7437179:1
position: 7437179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7437185:1
position: 7437185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7438773-7438889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7440275-7440352:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7441007-7441093:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7444408-7444485:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7444979-7445172:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7446539-7446683:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7449063-7449275:1:exon

Cep57l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cep57l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein CEP57L1 isoform X2
translation: MLAQLQREKEEDQLKLHAKLAKLDVLEQECFRLTTTQQTAEDKIKYLEEKLKEEEHQRKLFQDKACELQTGLEISKILMSTVSHSQHCKEKKKPPKKTKCLKREPPQQMDPRFRALFLEREKMVHPHGLYYLQKPVLVPEAQSLYKALRTSSQAKVLPLNSGDTVSTCDNLSELLMAMQEELDQMIVEHRELQKQMLQAGSHSLSDDAEHALEQLVRKMESKGDQISKLKKHQDSVRKLQQRVQSSRTNEPSIHWEAGKPKGPKKNSPRKCLNETNPFQKNSSVHPVQVHNLQVKLRRDDIQWEQ
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(7437180..7437185,7438773..7438889,7440275..7440352,7441007..7441093,7444408..7444485,7444979..7445172,7446539..7446683,7449063..7449275)
location: region:7437180-7449275:1
so has part: feature:7437180-7437185:1:exon
so has part: feature:7438773-7438889:1:exon
so has part: feature:7440275-7440352:1:exon
so has part: feature:7441007-7441093:1:exon
so has part: feature:7444408-7444485:1:exon
so has part: feature:7444979-7445172:1:exon
so has part: feature:7446539-7446683:1:exon
so has part: feature:7449063-7449275:1:exon

XP_028746072.1
type: Protein
SIO_000068: ncbiprotein

position:7437180:1
position: 7437180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7437180-7437185:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7438773-7438889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7440275-7440352:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7441007-7441093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7444408-7444485:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7444979-7445172:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7446539-7446683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7449063-7449275:1:exon

LOC114707511
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114707511
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7451977..7630218
location: region:7451977-7630218:1
so has part: feature:7451977-7630218:1:exon
subclass of: SO_0000010

114707511
type: Gene
SIO_000068: ncbigene

position:7451977:1
position: 7451977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7630218:1
position: 7630218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7451977-7630218:1:exon

LOC114707511
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114707511
product: uncharacterized LOC114707511
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037200291.1
SIO_010081: LOC114707511
subclass of: SO_0000673
so part of: LOC114707511
location: join(7451977..7452651,7469301..7469464,7472943..7473015,7473240..7473350,7479141..7479254,7480620..7480814,7481991..7482132,7483459..7483610,7488653..7488799,7491906..7492007,7496499..7496660,7502893..7503011,7503374..7503506,7503939..7504142,7513182..7513373,7515881..7516008,7526983..7527183,7528215..7528336,7529920..7530148,7534522..7534723,7537528..7537683,7540306..7540399,7541377..7541514,7548934..7549088,7550010..7550121,7551526..7551575,7551958..7552134,7561028..7561145,7562466..7562631,7568937..7569075,7578894..7579044,7581393..7581489,7582500..7582652,7588578..7588810,7589604..7589742,7590945..7591065,7602274..7602383,7608930..7609079,7610747..7610800,7611616..7611783,7613990..7614148,7614400..7614534,7615129..7615281,7617201..7617410,7622097..7622217,7628148..7628275,7629629..7629750,7629837..7630218)
location: region:7451977-7630218:1
so has part: feature:7451977-7452651:1:exon
so has part: feature:7469301-7469464:1:exon
so has part: feature:7472943-7473015:1:exon
so has part: feature:7473240-7473350:1:exon
so has part: feature:7479141-7479254:1:exon
so has part: feature:7480620-7480814:1:exon
so has part: feature:7481991-7482132:1:exon
so has part: feature:7483459-7483610:1:exon
so has part: feature:7488653-7488799:1:exon
so has part: feature:7491906-7492007:1:exon
so has part: feature:7496499-7496660:1:exon
so has part: feature:7502893-7503011:1:exon
so has part: feature:7503374-7503506:1:exon
so has part: feature:7503939-7504142:1:exon
so has part: feature:7513182-7513373:1:exon
so has part: feature:7515881-7516008:1:exon
so has part: feature:7526983-7527183:1:exon
so has part: feature:7528215-7528336:1:exon
so has part: feature:7529920-7530148:1:exon
so has part: feature:7534522-7534723:1:exon
so has part: feature:7537528-7537683:1:exon
so has part: feature:7540306-7540399:1:exon
so has part: feature:7541377-7541514:1:exon
so has part: feature:7548934-7549088:1:exon
so has part: feature:7550010-7550121:1:exon
so has part: feature:7551526-7551575:1:exon
so has part: feature:7551958-7552134:1:exon
so has part: feature:7561028-7561145:1:exon
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so has part: feature:7588578-7588810:1:exon
so has part: feature:7589604-7589742:1:exon
so has part: feature:7590945-7591065:1:exon
so has part: feature:7602274-7602383:1:exon
so has part: feature:7608930-7609079:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:7451977-7452651:1:exon

position:7452651:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7469301-7469464:1:exon

position:7469301:1
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reference: sequence
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position:7469464:1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:7472943-7473015:1:exon

position:7472943:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7473015:1
position: 7473015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7473240-7473350:1:exon

position:7473240:1
position: 7473240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7473350:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:7479141-7479254:1:exon

position:7479141:1
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reference: sequence
type: ForwardStrandPosition
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position:7479254:1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:7480620-7480814:1:exon

position:7480620:1
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reference: sequence
type: ForwardStrandPosition
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position:7480814:1
position: 7480814
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:7481991-7482132:1:exon

position:7481991:1
position: 7481991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7482132:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:7483459-7483610:1:exon

position:7483459:1
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reference: sequence
type: ForwardStrandPosition
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position:7483610:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7488653-7488799:1:exon

position:7488653:1
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reference: sequence
type: ForwardStrandPosition
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position:7488799:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:7491906-7492007:1:exon

position:7491906:1
position: 7491906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7492007:1
position: 7492007
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:7496499-7496660:1:exon

position:7496499:1
position: 7496499
reference: sequence
type: ForwardStrandPosition
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position:7496660:1
position: 7496660
reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:7502893-7503011:1:exon

position:7502893:1
position: 7502893
reference: sequence
type: ForwardStrandPosition
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position:7503011:1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:7503374-7503506:1:exon

position:7503374:1
position: 7503374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7503506:1
position: 7503506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7503939-7504142:1:exon

position:7503939:1
position: 7503939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7504142:1
position: 7504142
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:7513182-7513373:1:exon

position:7513182:1
position: 7513182
reference: sequence
type: ForwardStrandPosition
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position:7513373:1
position: 7513373
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:7515881-7516008:1:exon

position:7515881:1
position: 7515881
reference: sequence
type: ForwardStrandPosition
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position:7516008:1
position: 7516008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7526983-7527183:1:exon

position:7526983:1
position: 7526983
reference: sequence
type: ForwardStrandPosition
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position:7527183:1
position: 7527183
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:7528215-7528336:1:exon

position:7528215:1
position: 7528215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7528336:1
position: 7528336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7529920-7530148:1:exon

position:7529920:1
position: 7529920
reference: sequence
type: ForwardStrandPosition
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position:7530148:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:7534522-7534723:1:exon

position:7534522:1
position: 7534522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7534723:1
position: 7534723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7537528-7537683:1:exon

position:7537528:1
position: 7537528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7537683:1
position: 7537683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7540306-7540399:1:exon

position:7540306:1
position: 7540306
reference: sequence
type: ForwardStrandPosition
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position:7540399:1
position: 7540399
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:7541377-7541514:1:exon

position:7541377:1
position: 7541377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7541514:1
position: 7541514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7548934-7549088:1:exon

position:7548934:1
position: 7548934
reference: sequence
type: ForwardStrandPosition
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position:7549088:1
position: 7549088
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 25
SIO_000628: feature:7550010-7550121:1:exon

position:7550010:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7550121:1
position: 7550121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7551526-7551575:1:exon

position:7551526:1
position: 7551526
reference: sequence
type: ForwardStrandPosition
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position:7551575:1
position: 7551575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7551958-7552134:1:exon

position:7551958:1
position: 7551958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7552134:1
position: 7552134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7561028-7561145:1:exon

position:7561028:1
position: 7561028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7561145:1
position: 7561145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:7562466-7562631:1:exon

position:7562466:1
position: 7562466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7562631:1
position: 7562631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:7568937-7569075:1:exon

position:7568937:1
position: 7568937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7569075:1
position: 7569075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:7578894-7579044:1:exon

position:7578894:1
position: 7578894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7579044:1
position: 7579044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:7581393-7581489:1:exon

position:7581393:1
position: 7581393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7581489:1
position: 7581489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:7582500-7582652:1:exon

position:7582500:1
position: 7582500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7582652:1
position: 7582652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:7588578-7588810:1:exon

position:7588578:1
position: 7588578
reference: sequence
type: ForwardStrandPosition
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position:7588810:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 35
SIO_000628: feature:7589604-7589742:1:exon

position:7589604:1
position: 7589604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7589742:1
position: 7589742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:7590945-7591065:1:exon

position:7590945:1
position: 7590945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7591065:1
position: 7591065
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 37
SIO_000628: feature:7602274-7602383:1:exon

position:7602274:1
position: 7602274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7602383:1
position: 7602383
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 38
SIO_000628: feature:7608930-7609079:1:exon

position:7608930:1
position: 7608930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7609079:1
position: 7609079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:7610747-7610800:1:exon

position:7610747:1
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reference: sequence
type: ForwardStrandPosition
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position:7610800:1
position: 7610800
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 40
SIO_000628: feature:7611616-7611783:1:exon

position:7611616:1
position: 7611616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7611783:1
position: 7611783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:7613990-7614148:1:exon

position:7613990:1
position: 7613990
reference: sequence
type: ForwardStrandPosition
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position:7614148:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 42
SIO_000628: feature:7614400-7614534:1:exon

position:7614400:1
position: 7614400
reference: sequence
type: ForwardStrandPosition
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position:7614534:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 43
SIO_000628: feature:7615129-7615281:1:exon

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position: 7615129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7615281:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 44
SIO_000628: feature:7617201-7617410:1:exon

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reference: sequence
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position:7617410:1
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reference: sequence
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urn:…
SIO_000300: 45
SIO_000628: feature:7622097-7622217:1:exon

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position: 7622097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7622217:1
position: 7622217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:7628148-7628275:1:exon

position:7628148:1
position: 7628148
reference: sequence
type: ForwardStrandPosition
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position:7628275:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 47
SIO_000628: feature:7629629-7629750:1:exon

position:7629629:1
position: 7629629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7629750:1
position: 7629750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:7629837-7630218:1:exon

position:7629837:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114707511
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114707511
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein LOC114707511
translation: MDGVYKLSSTERIQLLEKDLAEKLSELKADLEEQEFLLPGTANWTFSSVQIPKDVSYFRREREVALKRTLRVAESKPLVIQADVLQRELESCLRREYTPENLPLLLLQYYTERITHLAQSKHLLMLRWKRLCQTSETMEELLPLYKKQVGYIMQEFDDAVQRAERLSAARDNFLTGKSNPPTLVTPEDLTIYTRWLVCHLHSLRTIHQYLQALQCLPISRVLRSLPQNRLSESSEEQEKACVGDLSSAPPGPTDASISGRRGAAWVLPQHVTEKEEVKPQLRHLLSHFHIPYDLEKLSDSAEEMELFSLVSQNFQSIFTEQQRMRTFQDYEAGRAKVQNLSGPAATLKKQATWVPFVKVKPKRDPWQKRMLTRLKERKRRDELMQLQSQFLKISDPVKVLQVLQDHAAKTVTIALHRSSFTTSQALHPCDYDQVWKNIYSNARLYQHENVKDDGLSVEPSNDDDDIAKIHLSPSSDGPLKQKPETGYNYAVTLQLLGLSDGTEPDQNPVLLRGAYLSFLCLRHLHIRELQRACLGVLNYFRSVERTLTINTSGLTLVSGNLVPTVGDNSWINMSKGGLGTSQGLGAYHYIHGTPAEHKVHGGQFLEFSEAENQDDFHSMQAGCVHTQDQLAXYIMYDDALQDLKELESELLIIASHFIEKEKSHREDSKPEGSECWDWAHASVDRFAVLYDLWTWEANLLESKRQLLDSYLEAYQHTLDPEERFPLAQAMTDIMHRRPKFDLGHSYFTKAYQDDCSCLRLHQQLVRGILSHHREQQREYVQRLWRGDHAEAHKTFGLPRNLICRQFVSTNNSCPASENAHLLEFHPSLGLVGLVPTALAHLLREARHAHKPASPSGLAQLEQHVLQLALDLWLTPARPEDWYSAQLQRDLFSAKVMGXPFLVEEVGLRALRSAADEGQKQGQDFHALLLETFSKLLELLTLRHRLIEMSVESAYLARLYKESAREMGFEEFHLYLRPVPFECASHEDKADPPPPVFMTSLLEDSGRVDRYSPTALVLAISELDDNQIGKFSFYTKDAILKLLLHSGVENMQVTLACQTAQKNALMVAVQQVSFYDIPGVDSRVDRKETSSALRHHGGMSPTRRDSRTLNGIECLLLAPTPKAPDTLTHSSEGSKTAKRAPEAFVSIQLEKVGLRDTMLNAFLSRKQKMADRMENPDDIEKVKRELIVEYCQKLTGRMSHSALRGQIMVYCNSLRVLLDDFPTIRDTFFMVGQPNEKKGLKDPSGEFKMDPRSFQPRPRRLLSADGRVFLNLWFIPHPSEVLFMFKTLPEEAAFRALKLTLQLVASLHDIVAYLFSFAKLGDCPASFDAPLSPHPVRSDWGGAEGIGSELQELQKMIDSLQSPQDPSQVAQALLLRREVTWLQFDAAMRHLLRTFLAAGNAPAHQSVAEGVCHGLPPLSNSLGRSIFASQLSLPQPLHPRDLQAFTMFPWRTFLEDGGPFPAMSSVPNTLEYDMQMCLCGLSDRDRKVAHGELVGVQTLMEDVLLSSYHVITEASPEWQATLGNTQPDGSKLSGLRPRQSESHPKASALLERPCDAVMSLALMKSFLVLWKQLEVLKDHWGRLRLQGQEISSGPLYKQFSELYEADIFYPSMKALARQMGKEDEFEGLMIRSQSILPPKGASEIEIKTQQLQKLLESLEIHMIQEVLRKVNRERTLLLSEKSKEESTLPTDLWKHQVMKENFSVVRPQIVERFVQRLMEKSQDNGPEISFRREHLEACLLSLGCDVMARERSNFETYSMCYEHLLRHARERLGQREQEVDFLRRSQVPPEDCAGQLAELSHDMVMEITALRAQLTDLEEGTLNLKHQTRKEVQEEYRALVQALFMTCLHIKEKLDENQFHLIQKVCELIGEVRAEGIANMKQLKKTWGSTRPDEEAEEHAAAAKEQLRPLEQDNSSTLAALVCKARSLGRWRLAVQEARLRGQLSRAEKESAHSKRECSRTKLMAAQEVHFLQQELLAARQALAEAQADNRKLRRQQDTQA…
SIO_010081: LOC114707511
subclass of: SO_0000673
so part of: LOC114707511
location: join(7469325..7469464,7472943..7473015,7473240..7473350,7479141..7479254,7480620..7480814,7481991..7482132,7483459..7483610,7488653..7488799,7491906..7492007,7496499..7496660,7502893..7503011,7503374..7503506,7503939..7504142,7513182..7513373,7515881..7516008,7526983..7527183,7528215..7528336,7529920..7530148,7534522..7534723,7537528..7537683,7540306..7540399,7541377..7541514,7548934..7549088,7550010..7550121,7551526..7551575,7551958..7552134,7561028..7561145,7562466..7562631,7568937..7569075,7578894..7579044,7581393..7581489,7582500..7582652,7588578..7588810,7589604..7589742,7590945..7591065,7602274..7602383,7608930..7609079,7610747..7610800,7611616..7611783,7613990..7614148,7614400..7614534,7615129..7615281,7617201..7617410,7622097..7622217,7628148..7628275,7629629..7629750,7629837..7629882)
location: region:7469325-7629882:1
so has part: feature:7469325-7469464:1:exon
so has part: feature:7472943-7473015:1:exon
so has part: feature:7473240-7473350:1:exon
so has part: feature:7479141-7479254:1:exon
so has part: feature:7480620-7480814:1:exon
so has part: feature:7481991-7482132:1:exon
so has part: feature:7483459-7483610:1:exon
so has part: feature:7488653-7488799:1:exon
so has part: feature:7491906-7492007:1:exon
so has part: feature:7496499-7496660:1:exon
so has part: feature:7502893-7503011:1:exon
so has part: feature:7503374-7503506:1:exon
so has part: feature:7503939-7504142:1:exon
so has part: feature:7513182-7513373:1:exon
so has part: feature:7515881-7516008:1:exon
so has part: feature:7526983-7527183:1:exon
so has part: feature:7528215-7528336:1:exon
so has part: feature:7529920-7530148:1:exon
so has part: feature:7534522-7534723:1:exon
so has part: feature:7537528-7537683:1:exon
so has part: feature:7540306-7540399:1:exon
so has part: feature:7541377-7541514:1:exon
so has part: feature:7548934-7549088:1:exon
so has part: feature:7550010-7550121:1:exon
so has part: feature:7551526-7551575:1:exon
so has part: feature:7551958-7552134:1:exon
so has part: feature:7561028-7561145:1:exon
so has part: feature:7562466-7562631:1:exon
so has part: feature:7568937-7569075:1:exon
so has part: feature:7578894-7579044:1:exon
so has part: feature:7581393-7581489:1:exon
so has part: feature:7582500-7582652:1:exon
so has part: feature:7588578-7588810:1:exon
so has part: feature:7589604-7589742:1:exon
so has part: feature:7590945-7591065:1:exon
so has part: feature:7602274-7602383:1:exon
so has part: feature:7608930-7609079:1:exon
so has part: feature:7610747-7610800:1:exon
so has part: feature:7611616-7611783:1:exon
so has part: feature:7613990-7614148:1:exon
so has part: feature:7614400-7614534:1:exon
so has part: feature:7615129-7615281:1:exon
so has part: feature:7617201-7617410:1:exon
so has part: feature:7622097-7622217:1:exon
so has part: feature:7628148-7628275:1:exon
so has part: feature:7629629-7629750:1:exon
so has part: feature:7629837-7629882:1:exon

XP_037056186.1
type: Protein
SIO_000068: ncbiprotein

position:7469325:1
position: 7469325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7629882:1
position: 7629882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7469325-7469464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7472943-7473015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7473240-7473350:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7479141-7479254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7480620-7480814:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7481991-7482132:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7483459-7483610:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7488653-7488799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7491906-7492007:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7496499-7496660:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7502893-7503011:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7503374-7503506:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7503939-7504142:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7513182-7513373:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7515881-7516008:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7526983-7527183:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7528215-7528336:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7529920-7530148:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7534522-7534723:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7537528-7537683:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7540306-7540399:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7541377-7541514:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7548934-7549088:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7550010-7550121:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7551526-7551575:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7551958-7552134:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7561028-7561145:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7562466-7562631:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7568937-7569075:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7578894-7579044:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7581393-7581489:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7582500-7582652:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7588578-7588810:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7589604-7589742:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7590945-7591065:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7602274-7602383:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7608930-7609079:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7610747-7610800:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7611616-7611783:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:7613990-7614148:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:7614400-7614534:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:7615129-7615281:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:7617201-7617410:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:7622097-7622217:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:7628148-7628275:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:7629629-7629750:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:7629837-7629882:1:exon

Cd164
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Cd164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7639725..7652509)
location: region:7639725-7652509:-1
so has part: feature:7639725-7652509:-1:exon
subclass of: SO_0000010

114707528
type: Gene
SIO_000068: ncbigene

position:7639725:-1
position: 7639725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7652509:-1
position: 7652509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7639725-7652509:-1:exon

Cd164
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cd164
product: CD164 molecule
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 121 samples with support for all annotated introns
transcript id: XM_028890269.2
SIO_010081: Cd164
subclass of: SO_0000673
so part of: Cd164
location: complement(join(7639725..7642129,7643426..7643482,7647078..7647113,7648144..7648215,7649495..7649581,7652255..7652509))
location: region:7639725-7652509:-1
so has part: feature:7652255-7652509:-1:exon
so has part: feature:7649495-7649581:-1:exon
so has part: feature:7648144-7648215:-1:exon
so has part: feature:7647078-7647113:-1:exon
so has part: feature:7643426-7643482:-1:exon
so has part: feature:7639725-7642129:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7652255-7652509:-1:exon

position:7652255:-1
position: 7652255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7649495-7649581:-1:exon

position:7649495:-1
position: 7649495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7649581:-1
position: 7649581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7648144-7648215:-1:exon

position:7648144:-1
position: 7648144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7648215:-1
position: 7648215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7647078-7647113:-1:exon

position:7647078:-1
position: 7647078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7647113:-1
position: 7647113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7643426-7643482:-1:exon

position:7643426:-1
position: 7643426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7643482:-1
position: 7643482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7639725-7642129:-1:exon

position:7642129:-1
position: 7642129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cd164
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cd164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sialomucin core protein 24
translation: MSGVSRRLLWAATCLAALCVAAAQTPNSSVAPNVTEIVTSKPVPTTLTPTALPETCESRNSCFSCVNTTINNTTCFWVDCQEANKTYCSSVRLSNCSWVNNTASCSVPTATPVPTNSTAKPTTRPSSPTPTPSVVTSAGATNTTLTPTSQPERKSTFDAASFIGGIVLILGLQAVIFFLYKFCKSKERNYHTL
SIO_010081: Cd164
subclass of: SO_0000673
so part of: Cd164
location: complement(join(7641960..7642129,7643426..7643482,7647078..7647113,7648144..7648215,7649495..7649581,7652255..7652414))
location: region:7641960-7652414:-1
so has part: feature:7652255-7652414:-1:exon
so has part: feature:7649495-7649581:-1:exon
so has part: feature:7648144-7648215:-1:exon
so has part: feature:7647078-7647113:-1:exon
so has part: feature:7643426-7643482:-1:exon
so has part: feature:7641960-7642129:-1:exon

XP_028746102.1
type: Protein
SIO_000068: ncbiprotein

position:7641960:-1
position: 7641960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7652414:-1
position: 7652414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7652255-7652414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7649495-7649581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7648144-7648215:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7647078-7647113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7643426-7643482:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7641960-7642129:-1:exon

Ppil6
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Ppil6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7670441..7695948)
location: region:7670441-7695948:-1
so has part: feature:7670441-7695948:-1:exon
subclass of: SO_0000010

114707527
type: Gene
SIO_000068: ncbigene

position:7670441:-1
position: 7670441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7695948:-1
position: 7695948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7670441-7695948:-1:exon

Ppil6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Ppil6
product: peptidylprolyl isomerase like 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_037200499.1
SIO_010081: Ppil6
subclass of: SO_0000673
so part of: Ppil6
location: complement(join(7670441..7671628,7677823..7677879,7683311..7683416,7683562..7683624,7688024..7688212,7691883..7691978,7695747..7695948))
location: region:7670441-7695948:-1
so has part: feature:7695747-7695948:-1:exon
so has part: feature:7691883-7691978:-1:exon
so has part: feature:7688024-7688212:-1:exon
so has part: feature:7683562-7683624:-1:exon
so has part: feature:7683311-7683416:-1:exon
so has part: feature:7677823-7677879:-1:exon
so has part: feature:7670441-7671628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7695747-7695948:-1:exon

position:7695747:-1
position: 7695747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7691883-7691978:-1:exon

position:7691883:-1
position: 7691883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7691978:-1
position: 7691978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7688024-7688212:-1:exon

position:7688024:-1
position: 7688024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7688212:-1
position: 7688212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7683562-7683624:-1:exon

position:7683562:-1
position: 7683562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7683624:-1
position: 7683624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7683311-7683416:-1:exon

position:7683311:-1
position: 7683311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7683416:-1
position: 7683416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7677823-7677879:-1:exon

position:7677823:-1
position: 7677823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7677879:-1
position: 7677879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7670441-7671628:-1:exon

position:7671628:-1
position: 7671628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ppil6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Ppil6
product: peptidylprolyl isomerase like 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_037200500.1
SIO_010081: Ppil6
subclass of: SO_0000673
so part of: Ppil6
location: complement(join(7670441..7671628,7683311..7683458,7683562..7683624,7688024..7688212,7691883..7691978,7695747..7695948))
location: region:7670441-7695948:-1
so has part: feature:7695747-7695948:-1:exon
so has part: feature:7691883-7691978:-1:exon
so has part: feature:7688024-7688212:-1:exon
so has part: feature:7683562-7683624:-1:exon
so has part: feature:7683311-7683458:-1:exon
so has part: feature:7670441-7671628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7695747-7695948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7691883-7691978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7688024-7688212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7683562-7683624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7683311-7683458:-1:exon

position:7683458:-1
position: 7683458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7670441-7671628:-1:exon

Ppil6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Ppil6
product: peptidylprolyl isomerase like 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_028890264.2
SIO_010081: Ppil6
subclass of: SO_0000673
so part of: Ppil6
location: complement(join(7670441..7671628,7677823..7677879,7683311..7683458,7683562..7683624,7688024..7688212,7691883..7691978,7695747..7695948))
location: region:7670441-7695948:-1
so has part: feature:7695747-7695948:-1:exon
so has part: feature:7691883-7691978:-1:exon
so has part: feature:7688024-7688212:-1:exon
so has part: feature:7683562-7683624:-1:exon
so has part: feature:7683311-7683458:-1:exon
so has part: feature:7677823-7677879:-1:exon
so has part: feature:7670441-7671628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7695747-7695948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7691883-7691978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7688024-7688212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7683562-7683624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7683311-7683458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7677823-7677879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7670441-7671628:-1:exon

Ppil6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Ppil6
product: peptidylprolyl isomerase like 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_028890265.2
SIO_010081: Ppil6
subclass of: SO_0000673
so part of: Ppil6
location: complement(join(7670441..7671628,7677823..7677879,7683311..7683458,7683562..7683624,7688024..7688212,7691883..7691978,7694148..7695738))
location: region:7670441-7695738:-1
so has part: feature:7694148-7695738:-1:exon
so has part: feature:7691883-7691978:-1:exon
so has part: feature:7688024-7688212:-1:exon
so has part: feature:7683562-7683624:-1:exon
so has part: feature:7683311-7683458:-1:exon
so has part: feature:7677823-7677879:-1:exon
so has part: feature:7670441-7671628:-1:exon

position:7695738:-1
position: 7695738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7694148-7695738:-1:exon

position:7694148:-1
position: 7694148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7691883-7691978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7688024-7688212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7683562-7683624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7683311-7683458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7677823-7677879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7670441-7671628:-1:exon

Ppil6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Ppil6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable inactive peptidyl-prolyl cis-trans isomerase-like 6 isoform X3
translation: MAAPQRQPCRPKPPTCPTKSPPEPPLRVKVVGLFKSSSFQVSKTIAETLKNNYPSRFEDPVIIALQEFAWDQYLQEKKRELKGDTWVYSSYVMCFVNDQFLGNAFDLKKWAQKVWDVVDVRPSALYEALTLNYATKFLKDTKHDFVYLDICIDLSPIGRLIFEVLCTGMAGFSERGIKLHYKDSIFHRVVQNGWIQGGDIVEGKGDDGESIYGPTFEDENFSVPHDKRGVLGMVNKGRHTNGSQFYITLQATPYLDKKYVAFGYVHYRFFCMVFTHIKCCSKIFASLLYIV
SIO_010081: Ppil6
subclass of: SO_0000673
so part of: Ppil6
location: complement(join(7671405..7671628,7677823..7677879,7683311..7683416,7683562..7683624,7688024..7688212,7691883..7691978,7695747..7695887))
location: region:7671405-7695887:-1
so has part: feature:7695747-7695887:-1:exon
so has part: feature:7691883-7691978:-1:exon
so has part: feature:7688024-7688212:-1:exon
so has part: feature:7683562-7683624:-1:exon
so has part: feature:7683311-7683416:-1:exon
so has part: feature:7677823-7677879:-1:exon
so has part: feature:7671405-7671628:-1:exon

XP_037056394.1
type: Protein
SIO_000068: ncbiprotein

position:7671405:-1
position: 7671405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7695887:-1
position: 7695887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7695747-7695887:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7691883-7691978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7688024-7688212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7683562-7683624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7683311-7683416:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7677823-7677879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7671405-7671628:-1:exon

Ppil6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Ppil6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable inactive peptidyl-prolyl cis-trans isomerase-like 6 isoform X4
translation: MAAPQRQPCRPKPPTCPTKSPPEPPLRVKVVGLFKSSSFQVSKTIAETLKNNYPSRFEDPVIIALQEFAWDQYLQEKKRELKGDTWVYSSYVMCFVNDQFLGNAFDLKKWAQKVWDVVDVRPSALYEALTLNYATKFLKDTKHDFVYLDICIDLSPIGRLIFELYCDTCPKTCKNFQVLCTGMAGFSERGIKLHYKDSIFHRVVQNGWIQGGDENFSVPHDKRGVLGMVNKGRHTNGSQFYITLQATPYLDKKYVAFGYVHYRFFCMVFTHIKCCSKIFASLLYIV
SIO_010081: Ppil6
subclass of: SO_0000673
so part of: Ppil6
location: complement(join(7671405..7671628,7683311..7683458,7683562..7683624,7688024..7688212,7691883..7691978,7695747..7695887))
location: region:7671405-7695887:-1
so has part: feature:7695747-7695887:-1:exon
so has part: feature:7691883-7691978:-1:exon
so has part: feature:7688024-7688212:-1:exon
so has part: feature:7683562-7683624:-1:exon
so has part: feature:7683311-7683458:-1:exon
so has part: feature:7671405-7671628:-1:exon

XP_037056395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7695747-7695887:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7691883-7691978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7688024-7688212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7683562-7683624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7683311-7683458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7671405-7671628:-1:exon

Ppil6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Ppil6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable inactive peptidyl-prolyl cis-trans isomerase-like 6 isoform X1
translation: MAAPQRQPCRPKPPTCPTKSPPEPPLRVKVVGLFKSSSFQVSKTIAETLKNNYPSRFEDPVIIALQEFAWDQYLQEKKRELKGDTWVYSSYVMCFVNDQFLGNAFDLKKWAQKVWDVVDVRPSALYEALTLNYATKFLKDTKHDFVYLDICIDLSPIGRLIFELYCDTCPKTCKNFQVLCTGMAGFSERGIKLHYKDSIFHRVVQNGWIQGGDIVEGKGDDGESIYGPTFEDENFSVPHDKRGVLGMVNKGRHTNGSQFYITLQATPYLDKKYVAFGYVHYRFFCMVFTHIKCCSKIFASLLYIV
SIO_010081: Ppil6
subclass of: SO_0000673
so part of: Ppil6
location: complement(join(7671405..7671628,7677823..7677879,7683311..7683458,7683562..7683624,7688024..7688212,7691883..7691978,7695747..7695887))
location: region:7671405-7695887:-1
so has part: feature:7695747-7695887:-1:exon
so has part: feature:7691883-7691978:-1:exon
so has part: feature:7688024-7688212:-1:exon
so has part: feature:7683562-7683624:-1:exon
so has part: feature:7683311-7683458:-1:exon
so has part: feature:7677823-7677879:-1:exon
so has part: feature:7671405-7671628:-1:exon

XP_028746097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7695747-7695887:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7691883-7691978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7688024-7688212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7683562-7683624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7683311-7683458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7677823-7677879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7671405-7671628:-1:exon

Ppil6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Ppil6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable inactive peptidyl-prolyl cis-trans isomerase-like 6 isoform X2
translation: MVTGLSIILALKRPRQEDSELKVSLDYKAIPCLYNKAKHQSQDTLKNNYPSRFEDPVIIALQEFAWDQYLQEKKRELKGDTWVYSSYVMCFVNDQFLGNAFDLKKWAQKVWDVVDVRPSALYEALTLNYATKFLKDTKHDFVYLDICIDLSPIGRLIFELYCDTCPKTCKNFQVLCTGMAGFSERGIKLHYKDSIFHRVVQNGWIQGGDIVEGKGDDGESIYGPTFEDENFSVPHDKRGVLGMVNKGRHTNGSQFYITLQATPYLDKKYVAFGYVHYRFFCMVFTHIKCCSKIFASLLYIV
SIO_010081: Ppil6
subclass of: SO_0000673
so part of: Ppil6
location: complement(join(7671405..7671628,7677823..7677879,7683311..7683458,7683562..7683624,7688024..7688212,7691883..7691978,7694148..7694276))
location: region:7671405-7694276:-1
so has part: feature:7694148-7694276:-1:exon
so has part: feature:7691883-7691978:-1:exon
so has part: feature:7688024-7688212:-1:exon
so has part: feature:7683562-7683624:-1:exon
so has part: feature:7683311-7683458:-1:exon
so has part: feature:7677823-7677879:-1:exon
so has part: feature:7671405-7671628:-1:exon

XP_028746098.1
type: Protein
SIO_000068: ncbiprotein

position:7694276:-1
position: 7694276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7694148-7694276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7691883-7691978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7688024-7688212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7683562-7683624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7683311-7683458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7677823-7677879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7671405-7671628:-1:exon

Smpd2
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Smpd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7696054..7699264
location: region:7696054-7699264:1
so has part: feature:7696054-7699264:1:exon
subclass of: SO_0000010

114707526
type: Gene
SIO_000068: ncbigene

position:7696054:1
position: 7696054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7699264:1
position: 7699264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7696054-7699264:1:exon

Smpd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Smpd2
product: sphingomyelin phosphodiesterase 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_028890262.2
SIO_010081: Smpd2
subclass of: SO_0000673
so part of: Smpd2
location: join(7696054..7696395,7696855..7696951,7697057..7697133,7697383..7697476,7697592..7697681,7697909..7697991,7698111..7698244,7698325..7698429,7698645..7698798,7698886..7699264)
location: region:7696054-7699264:1
so has part: feature:7696054-7696395:1:exon
so has part: feature:7696855-7696951:1:exon
so has part: feature:7697057-7697133:1:exon
so has part: feature:7697383-7697476:1:exon
so has part: feature:7697592-7697681:1:exon
so has part: feature:7697909-7697991:1:exon
so has part: feature:7698111-7698244:1:exon
so has part: feature:7698325-7698429:1:exon
so has part: feature:7698645-7698798:1:exon
so has part: feature:7698886-7699264:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7696054-7696395:1:exon

position:7696395:1
position: 7696395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7696855-7696951:1:exon

position:7696855:1
position: 7696855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7696951:1
position: 7696951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7697057-7697133:1:exon

position:7697057:1
position: 7697057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7697133:1
position: 7697133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7697383-7697476:1:exon

position:7697383:1
position: 7697383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7697476:1
position: 7697476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7697592-7697681:1:exon

position:7697592:1
position: 7697592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7697681:1
position: 7697681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7697909-7697991:1:exon

position:7697909:1
position: 7697909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7697991:1
position: 7697991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7698111-7698244:1:exon

position:7698111:1
position: 7698111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7698244:1
position: 7698244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7698325-7698429:1:exon

position:7698325:1
position: 7698325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7698429:1
position: 7698429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7698645-7698798:1:exon

position:7698645:1
position: 7698645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7698798:1
position: 7698798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7698886-7699264:1:exon

position:7698886:1
position: 7698886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Smpd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Smpd2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sphingomyelin phosphodiesterase 2
translation: MKPTFSVRLRVFNLNCWDIPYLSKHRTDRMKRLGDFLNLESFDLALLQEVWSEQDFQYLRQKLSLTYPDAHYFRSGLIGSGLCVFSRHPIQEIIQHVYTLNGYPYMVCHGDWFCGKAVGLLVLHLNGLVLNVYVTHLHAEYSRQKDIYLAHRVVQAWELAQFIHHTSKHADVVLLCGDLNMHPRDLGCCLLRGWTGLRDAYVETQDFKGSEDGCTMVPTNCYVSQQDLGPFPLGIRIDYVLYKAVSGFSICCKTLKTTTGCDPHNGTPLSDHEALMATLYVKHSPPQEDPSPAHGPPERSALISVLREAWTELGLGVAQARWWAALAGYVTVSGLFLLALLCALAVGGGAREVAMLLWTPSVGLVLGAGAVCVFHRQEARGLCRAQAELQHVLRRERETQDLGSEPHLAPS
SIO_010081: Smpd2
subclass of: SO_0000673
so part of: Smpd2
location: join(7696346..7696395,7696855..7696951,7697057..7697133,7697383..7697476,7697592..7697681,7697909..7697991,7698111..7698244,7698325..7698429,7698645..7698798,7698886..7699238)
location: region:7696346-7699238:1
so has part: feature:7696346-7696395:1:exon
so has part: feature:7696855-7696951:1:exon
so has part: feature:7697057-7697133:1:exon
so has part: feature:7697383-7697476:1:exon
so has part: feature:7697592-7697681:1:exon
so has part: feature:7697909-7697991:1:exon
so has part: feature:7698111-7698244:1:exon
so has part: feature:7698325-7698429:1:exon
so has part: feature:7698645-7698798:1:exon
so has part: feature:7698886-7699238:1:exon

XP_028746095.1
type: Protein
SIO_000068: ncbiprotein

position:7696346:1
position: 7696346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7699238:1
position: 7699238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7696346-7696395:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7696855-7696951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7697057-7697133:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7697383-7697476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7697592-7697681:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7697909-7697991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7698111-7698244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7698325-7698429:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7698645-7698798:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7698886-7699238:1:exon

Mical1
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Mical1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7699407..7710571)
location: region:7699407-7710571:-1
so has part: feature:7699407-7710571:-1:exon
subclass of: SO_0000010

114707525
type: Gene
SIO_000068: ncbigene

position:7699407:-1
position: 7699407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7710571:-1
position: 7710571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7699407-7710571:-1:exon

Mical1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Mical1
product: microtubule associated monooxygenase, calponin and LIM domain containing 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_028890261.2
SIO_010081: Mical1
subclass of: SO_0000673
so part of: Mical1
location: complement(join(7699407..7699682,7700007..7700080,7700176..7700275,7700431..7700524,7700640..7700753,7700994..7701100,7701239..7701518,7701708..7701784,7702024..7702180,7702304..7702387,7702724..7702812,7702902..7703091,7704084..7704228,7704726..7704807,7704990..7705116,7705299..7705414,7705634..7705891,7706614..7706714,7707245..7707400,7707518..7707622,7707954..7708058,7708371..7708578,7708676..7708976,7710482..7710571))
location: region:7699407-7710571:-1
so has part: feature:7710482-7710571:-1:exon
so has part: feature:7708676-7708976:-1:exon
so has part: feature:7708371-7708578:-1:exon
so has part: feature:7707954-7708058:-1:exon
so has part: feature:7707518-7707622:-1:exon
so has part: feature:7707245-7707400:-1:exon
so has part: feature:7706614-7706714:-1:exon
so has part: feature:7705634-7705891:-1:exon
so has part: feature:7705299-7705414:-1:exon
so has part: feature:7704990-7705116:-1:exon
so has part: feature:7704726-7704807:-1:exon
so has part: feature:7704084-7704228:-1:exon
so has part: feature:7702902-7703091:-1:exon
so has part: feature:7702724-7702812:-1:exon
so has part: feature:7702304-7702387:-1:exon
so has part: feature:7702024-7702180:-1:exon
so has part: feature:7701708-7701784:-1:exon
so has part: feature:7701239-7701518:-1:exon
so has part: feature:7700994-7701100:-1:exon
so has part: feature:7700640-7700753:-1:exon
so has part: feature:7700431-7700524:-1:exon
so has part: feature:7700176-7700275:-1:exon
so has part: feature:7700007-7700080:-1:exon
so has part: feature:7699407-7699682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7710482-7710571:-1:exon

position:7710482:-1
position: 7710482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7708676-7708976:-1:exon

position:7708676:-1
position: 7708676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7708976:-1
position: 7708976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7708371-7708578:-1:exon

position:7708371:-1
position: 7708371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7708578:-1
position: 7708578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7707954-7708058:-1:exon

position:7707954:-1
position: 7707954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7708058:-1
position: 7708058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7707518-7707622:-1:exon

position:7707518:-1
position: 7707518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7707622:-1
position: 7707622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7707245-7707400:-1:exon

position:7707245:-1
position: 7707245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7707400:-1
position: 7707400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7706614-7706714:-1:exon

position:7706614:-1
position: 7706614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7706714:-1
position: 7706714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7705634-7705891:-1:exon

position:7705634:-1
position: 7705634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7705891:-1
position: 7705891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7705299-7705414:-1:exon

position:7705299:-1
position: 7705299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7705414:-1
position: 7705414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7704990-7705116:-1:exon

position:7704990:-1
position: 7704990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7705116:-1
position: 7705116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7704726-7704807:-1:exon

position:7704726:-1
position: 7704726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7704807:-1
position: 7704807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7704084-7704228:-1:exon

position:7704084:-1
position: 7704084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7704228:-1
position: 7704228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7702902-7703091:-1:exon

position:7702902:-1
position: 7702902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7703091:-1
position: 7703091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7702724-7702812:-1:exon

position:7702724:-1
position: 7702724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7702812:-1
position: 7702812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7702304-7702387:-1:exon

position:7702304:-1
position: 7702304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7702387:-1
position: 7702387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7702024-7702180:-1:exon

position:7702024:-1
position: 7702024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7702180:-1
position: 7702180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7701708-7701784:-1:exon

position:7701708:-1
position: 7701708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7701784:-1
position: 7701784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7701239-7701518:-1:exon

position:7701239:-1
position: 7701239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7701518:-1
position: 7701518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7700994-7701100:-1:exon

position:7700994:-1
position: 7700994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7701100:-1
position: 7701100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7700640-7700753:-1:exon

position:7700640:-1
position: 7700640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7700753:-1
position: 7700753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7700431-7700524:-1:exon

position:7700431:-1
position: 7700431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7700524:-1
position: 7700524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7700176-7700275:-1:exon

position:7700176:-1
position: 7700176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7700275:-1
position: 7700275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7700007-7700080:-1:exon

position:7700007:-1
position: 7700007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7700080:-1
position: 7700080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7699407-7699682:-1:exon

position:7699682:-1
position: 7699682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mical1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Mical1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: F-actin-monooxygenase MICAL1
translation: MASTASTNPAHAHFESFVQAQQCQDVLSSFRGLCEALGLEPGGGLPQYHKIKAQLNYWSAKSLWAKLDKRASQSVYQQGQACANTKCLVVGAGPCGLRAAVELALLGARVVLVEKRTKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGIAFTGLQPPPRKGSGWHAQLQPSPPAQLANYEFDVLISAAGGKFVPEGFTIREMRGKLAIGITVNFVNGRTVEETQVPEISGVARIYNQKFFQSLLKATGIDLENIVYYKDDTHYFVMTAKKQCLLRLGVLLQDLPETDQLLGRANVVPEALQRFARAAADFATHGKLGKLEFAQDARGRPDVAAFDFTSMMRAESSARVQEKHGARLLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAWMVKRWAEGAKPLEVLAERESLYQLLSQTSPENMHRNVAQYGLDPATRYPNLNLRAVTPNQVQDLYDVLDKEHAQRKNDKTDAGKVTTGSAGTEELLHWCQEQTAGFPGVHVTDFSSSWTDGLALCALVHRLQPGLLEPSELQGXGALEATAWALKVAQHELGITPVLSAQAVVAGSDPLGLIAYLSHFHSAFKNMPQSSSPVSQPPPGTSNAILFLGKLQRTLQRTRAKVEAETPSTEEPPVSEPSVPPAPPSENQEAGAEDLCELCGKHLYILERFCVDGHFFHRDCFRCHTCEATLWPGGYGQHLGDGHFYCLQHLPQEGQKAADRDGSPENQELPTPDDDSTESGPPSPPVSPAKRVSPAPSPSQPARRLIRLSSLERLRLSSLAITPDSGTEPPPKPPRSCAALARQALEGSFMGWGVPVQAPQVPEATEKVEENPFSSEEEEEEEEEEEEVPLEADIEQTLLTLTKNSGAMTKYPTWYRTLMRRAKEEEMKRFCKAQAIQRRLNEIEAAMRELETEGTRLELALRSQSSSPEQQKKLWLDQLLQLIQEKNSLVTEEAELMITVQELDLEEKQWQLDQELRGYMNREETLKTEADRQSEDRVLRKLVDVVNQRDALIRFQEERRLSEMASGTGAQG
SIO_010081: Mical1
subclass of: SO_0000673
so part of: Mical1
location: complement(join(7699534..7699682,7700007..7700080,7700176..7700275,7700431..7700524,7700640..7700753,7700994..7701100,7701239..7701518,7701708..7701784,7702024..7702180,7702304..7702387,7702724..7702812,7702902..7703091,7704084..7704228,7704726..7704807,7704990..7705116,7705299..7705414,7705634..7705891,7706614..7706714,7707245..7707400,7707518..7707622,7707954..7708058,7708371..7708578,7708676..7708933))
location: region:7699534-7708933:-1
so has part: feature:7708676-7708933:-1:exon
so has part: feature:7708371-7708578:-1:exon
so has part: feature:7707954-7708058:-1:exon
so has part: feature:7707518-7707622:-1:exon
so has part: feature:7707245-7707400:-1:exon
so has part: feature:7706614-7706714:-1:exon
so has part: feature:7705634-7705891:-1:exon
so has part: feature:7705299-7705414:-1:exon
so has part: feature:7704990-7705116:-1:exon
so has part: feature:7704726-7704807:-1:exon
so has part: feature:7704084-7704228:-1:exon
so has part: feature:7702902-7703091:-1:exon
so has part: feature:7702724-7702812:-1:exon
so has part: feature:7702304-7702387:-1:exon
so has part: feature:7702024-7702180:-1:exon
so has part: feature:7701708-7701784:-1:exon
so has part: feature:7701239-7701518:-1:exon
so has part: feature:7700994-7701100:-1:exon
so has part: feature:7700640-7700753:-1:exon
so has part: feature:7700431-7700524:-1:exon
so has part: feature:7700176-7700275:-1:exon
so has part: feature:7700007-7700080:-1:exon
so has part: feature:7699534-7699682:-1:exon

XP_028746094.1
type: Protein
SIO_000068: ncbiprotein

position:7699534:-1
position: 7699534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7708933:-1
position: 7708933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7708676-7708933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7708371-7708578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7707954-7708058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7707518-7707622:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7707245-7707400:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7706614-7706714:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7705634-7705891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7705299-7705414:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7704990-7705116:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7704726-7704807:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7704084-7704228:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7702902-7703091:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7702724-7702812:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7702304-7702387:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7702024-7702180:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7701708-7701784:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7701239-7701518:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7700994-7701100:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7700640-7700753:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7700431-7700524:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7700176-7700275:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7700007-7700080:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7699534-7699682:-1:exon

Zbtb24
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Zbtb24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7720321..7735680)
location: region:7720321-7735680:-1
so has part: feature:7720321-7735680:-1:exon
subclass of: SO_0000010

114707512
type: Gene
SIO_000068: ncbigene

position:7720321:-1
position: 7720321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7735680:-1
position: 7735680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7720321-7735680:-1:exon

Zbtb24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Zbtb24
product: zinc finger and BTB domain containing 24, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_028890249.2
SIO_010081: Zbtb24
subclass of: SO_0000673
so part of: Zbtb24
location: complement(join(7720321..7721123,7723192..7723273,7729959..7730042,7730839..7730922,7731405..7731572,7734034..7735013,7735547..7735680))
location: region:7720321-7735680:-1
so has part: feature:7735547-7735680:-1:exon
so has part: feature:7734034-7735013:-1:exon
so has part: feature:7731405-7731572:-1:exon
so has part: feature:7730839-7730922:-1:exon
so has part: feature:7729959-7730042:-1:exon
so has part: feature:7723192-7723273:-1:exon
so has part: feature:7720321-7721123:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7735547-7735680:-1:exon

position:7735547:-1
position: 7735547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7734034-7735013:-1:exon

position:7734034:-1
position: 7734034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7735013:-1
position: 7735013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7731405-7731572:-1:exon

position:7731405:-1
position: 7731405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7731572:-1
position: 7731572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7730839-7730922:-1:exon

position:7730839:-1
position: 7730839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7730922:-1
position: 7730922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7729959-7730042:-1:exon

position:7729959:-1
position: 7729959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7730042:-1
position: 7730042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7723192-7723273:-1:exon

position:7723192:-1
position: 7723192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7723273:-1
position: 7723273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7720321-7721123:-1:exon

position:7721123:-1
position: 7721123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Zbtb24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Zbtb24
product: zinc finger and BTB domain containing 24, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_037200320.1
SIO_010081: Zbtb24
subclass of: SO_0000673
so part of: Zbtb24
location: complement(join(7720321..7721123,7723192..7723273,7729959..7730042,7730839..7730922,7731405..7731572,7734034..7735013,7735149..7735476))
location: region:7720321-7735476:-1
so has part: feature:7735149-7735476:-1:exon
so has part: feature:7734034-7735013:-1:exon
so has part: feature:7731405-7731572:-1:exon
so has part: feature:7730839-7730922:-1:exon
so has part: feature:7729959-7730042:-1:exon
so has part: feature:7723192-7723273:-1:exon
so has part: feature:7720321-7721123:-1:exon

position:7735476:-1
position: 7735476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7735149-7735476:-1:exon

position:7735149:-1
position: 7735149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7734034-7735013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7731405-7731572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7730839-7730922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7729959-7730042:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7723192-7723273:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7720321-7721123:-1:exon

Zbtb24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Zbtb24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 24 isoform X1
translation: MAETAPEPSGQLVVHSDTHSHTVLASLEEQRKRGFLCDITLIVENVHFRAHKALLAASSEYFSMMFAEEGEIGQSIYMLEGMVADTFGILLEFIYTGYLQASEKTTEQILATAQFLKVYDLIKAYTDFQTKHSSPTAPALNGTGTPVVVISNKKNDPLKRKRGRPRKGSSVQEGKSELAAEEDVQLRVNSSVQNRQNFVVREGDGVELSAQIPKEKASEPAGEPGRVEEMLAEKDENCDPEALNGQDSLSRYSKRRIRRSVKLKDYKLLGDEDDQSSAQRICGKKKRASGPGARCKDCGKVFKYNHFLAIHQRRHTGERPFTCGECGKGFAQKHSLQVHTRMHTGERPYTCTVCSKALTTKHSLLEHMSLHSGQKSFTCDQCGKYFSQKRQLKSHYRVHTGHSLPECNHCHRKFMDVSQLKKHLRTHTGEKPFTCEICGKSFTAKSSLQTHIRIHRGEKPYSCSICGKSFSDSSAKRRHCILHTGKKPFSCPECSLQFARLDNLKAHLKIHNKEKPAADSCSVSGGNADEVRNILQLQPYQLSTSGEQEIQLLVTDSVHNINFMPGPNPGVSLVAADTSQNMATDPAANLALLTQQPEQLQSLILSAQQEQTEHIQSLSMIGSQMESSQPEPVHVITLSKETLEHLHAQQQGQTEALRLAAGADPAQHLQLTRDPGPPLPTPLGQEQS
SIO_010081: Zbtb24
subclass of: SO_0000673
so part of: Zbtb24
location: complement(join(7720424..7721123,7723192..7723273,7729959..7730042,7730839..7730922,7731405..7731572,7734034..7734982))
location: region:7720424-7734982:-1
so has part: feature:7734034-7734982:-1:exon
so has part: feature:7731405-7731572:-1:exon
so has part: feature:7730839-7730922:-1:exon
so has part: feature:7729959-7730042:-1:exon
so has part: feature:7723192-7723273:-1:exon
so has part: feature:7720424-7721123:-1:exon

XP_028746082.1
type: Protein
SIO_000068: ncbiprotein

position:7720424:-1
position: 7720424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7734982:-1
position: 7734982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7734034-7734982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7731405-7731572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7730839-7730922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7729959-7730042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7723192-7723273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7720424-7721123:-1:exon

Zbtb24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Zbtb24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 24 isoform X1
translation: MAETAPEPSGQLVVHSDTHSHTVLASLEEQRKRGFLCDITLIVENVHFRAHKALLAASSEYFSMMFAEEGEIGQSIYMLEGMVADTFGILLEFIYTGYLQASEKTTEQILATAQFLKVYDLIKAYTDFQTKHSSPTAPALNGTGTPVVVISNKKNDPLKRKRGRPRKGSSVQEGKSELAAEEDVQLRVNSSVQNRQNFVVREGDGVELSAQIPKEKASEPAGEPGRVEEMLAEKDENCDPEALNGQDSLSRYSKRRIRRSVKLKDYKLLGDEDDQSSAQRICGKKKRASGPGARCKDCGKVFKYNHFLAIHQRRHTGERPFTCGECGKGFAQKHSLQVHTRMHTGERPYTCTVCSKALTTKHSLLEHMSLHSGQKSFTCDQCGKYFSQKRQLKSHYRVHTGHSLPECNHCHRKFMDVSQLKKHLRTHTGEKPFTCEICGKSFTAKSSLQTHIRIHRGEKPYSCSICGKSFSDSSAKRRHCILHTGKKPFSCPECSLQFARLDNLKAHLKIHNKEKPAADSCSVSGGNADEVRNILQLQPYQLSTSGEQEIQLLVTDSVHNINFMPGPNPGVSLVAADTSQNMATDPAANLALLTQQPEQLQSLILSAQQEQTEHIQSLSMIGSQMESSQPEPVHVITLSKETLEHLHAQQQGQTEALRLAAGADPAQHLQLTRDPGPPLPTPLGQEQS
SIO_010081: Zbtb24
subclass of: SO_0000673
so part of: Zbtb24
location: complement(join(7720424..7721123,7723192..7723273,7729959..7730042,7730839..7730922,7731405..7731572,7734034..7734982))
location: region:7720424-7734982:-1
so has part: feature:7734034-7734982:-1:exon
so has part: feature:7731405-7731572:-1:exon
so has part: feature:7730839-7730922:-1:exon
so has part: feature:7729959-7730042:-1:exon
so has part: feature:7723192-7723273:-1:exon
so has part: feature:7720424-7721123:-1:exon

XP_037056215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7734034-7734982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7731405-7731572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7730839-7730922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7729959-7730042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7723192-7723273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7720424-7721123:-1:exon

Zbtb24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Zbtb24
product: zinc finger and BTB domain containing 24, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_028890250.2
SIO_010081: Zbtb24
subclass of: SO_0000673
so part of: Zbtb24
location: complement(join(7730008..7730122,7730839..7730922,7731405..7731572,7734034..7735013,7735547..7735680))
location: region:7730008-7735680:-1
so has part: feature:7735547-7735680:-1:exon
so has part: feature:7734034-7735013:-1:exon
so has part: feature:7731405-7731572:-1:exon
so has part: feature:7730839-7730922:-1:exon
so has part: feature:7730008-7730122:-1:exon

position:7730008:-1
position: 7730008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7735547-7735680:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7734034-7735013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7731405-7731572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7730839-7730922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7730008-7730122:-1:exon

position:7730122:-1
position: 7730122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Zbtb24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Zbtb24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 24 isoform X2
translation: MAETAPEPSGQLVVHSDTHSHTVLASLEEQRKRGFLCDITLIVENVHFRAHKALLAASSEYFSMMFAEEGEIGQSIYMLEGMVADTFGILLEFIYTGYLQASEKTTEQILATAQFLKVYDLIKAYTDFQTKHSSPTAPALNGTGTPVVVISNKKNDPLKRKRGRPRKGSSVQEGKSELAAEEDVQLRVNSSVQNRQNFVVREGDGVELSAQIPKEKASEPAGEPGRVEEMLAEKDENCDPEALNGQDSLSRYSKRRIRRSVKLKDYKLLGDEDDQSSAQRICGKKKRASGPGARCKDCGKVFKYNHFLAIHQRRHTGERPFTCGECGKGFAQKHSLQVHTRMHTGERPYTCTVCSKALTTKHSLLEHMSLHSGQKSFTCDQCGKYFSQKRQLKSHYRVHTGQCFNTDH
SIO_010081: Zbtb24
subclass of: SO_0000673
so part of: Zbtb24
location: complement(join(7730097..7730122,7730839..7730922,7731405..7731572,7734034..7734982))
location: region:7730097-7734982:-1
so has part: feature:7734034-7734982:-1:exon
so has part: feature:7731405-7731572:-1:exon
so has part: feature:7730839-7730922:-1:exon
so has part: feature:7730097-7730122:-1:exon

XP_028746083.1
type: Protein
SIO_000068: ncbiprotein

position:7730097:-1
position: 7730097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7734034-7734982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7731405-7731572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7730839-7730922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7730097-7730122:-1:exon

Ak9
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Ak9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7741723..7880030)
location: region:7741723-7880030:-1
so has part: feature:7741723-7880030:-1:exon
subclass of: SO_0000010

114707495
type: Gene
SIO_000068: ncbigene

position:7741723:-1
position: 7741723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7880030:-1
position: 7880030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7741723-7880030:-1:exon

Ak9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Ak9
product: adenylate kinase 9
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037200453.1
SIO_010081: Ak9
subclass of: SO_0000673
so part of: Ak9
location: complement(join(7741723..7742204,7742966..7743080,7744662..7744764,7746178..7746276,7746762..7746931,7749106..7749302,7752163..7752383,7752491..7752637,7754599..7754800,7760713..7760926,7762610..7762828,7763179..7763385,7771357..7771413,7772822..7773041,7777969..7778093,7780427..7780687,7782719..7782932,7788178..7788299,7788600..7788800,7789601..7789690,7793501..7793677,7796104..7796180,7802443..7802557,7804455..7804611,7807814..7807962,7814320..7814415,7814501..7814614,7817844..7817988,7827833..7828013,7828093..7828232,7833962..7834060,7837544..7837618,7839301..7839429,7861123..7861308,7866537..7866649,7869213..7869309,7869409..7869461,7871786..7871849,7873252..7873379,7879221..7880030))
location: region:7741723-7880030:-1
so has part: feature:7879221-7880030:-1:exon
so has part: feature:7873252-7873379:-1:exon
so has part: feature:7871786-7871849:-1:exon
so has part: feature:7869409-7869461:-1:exon
so has part: feature:7869213-7869309:-1:exon
so has part: feature:7866537-7866649:-1:exon
so has part: feature:7861123-7861308:-1:exon
so has part: feature:7839301-7839429:-1:exon
so has part: feature:7837544-7837618:-1:exon
so has part: feature:7833962-7834060:-1:exon
so has part: feature:7828093-7828232:-1:exon
so has part: feature:7827833-7828013:-1:exon
so has part: feature:7817844-7817988:-1:exon
so has part: feature:7814501-7814614:-1:exon
so has part: feature:7814320-7814415:-1:exon
so has part: feature:7807814-7807962:-1:exon
so has part: feature:7804455-7804611:-1:exon
so has part: feature:7802443-7802557:-1:exon
so has part: feature:7796104-7796180:-1:exon
so has part: feature:7793501-7793677:-1:exon
so has part: feature:7789601-7789690:-1:exon
so has part: feature:7788600-7788800:-1:exon
so has part: feature:7788178-7788299:-1:exon
so has part: feature:7782719-7782932:-1:exon
so has part: feature:7780427-7780687:-1:exon
so has part: feature:7777969-7778093:-1:exon
so has part: feature:7772822-7773041:-1:exon
so has part: feature:7771357-7771413:-1:exon
so has part: feature:7763179-7763385:-1:exon
so has part: feature:7762610-7762828:-1:exon
so has part: feature:7760713-7760926:-1:exon
so has part: feature:7754599-7754800:-1:exon
so has part: feature:7752491-7752637:-1:exon
so has part: feature:7752163-7752383:-1:exon
so has part: feature:7749106-7749302:-1:exon
so has part: feature:7746762-7746931:-1:exon
so has part: feature:7746178-7746276:-1:exon
so has part: feature:7744662-7744764:-1:exon
so has part: feature:7742966-7743080:-1:exon
so has part: feature:7741723-7742204:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7879221-7880030:-1:exon

position:7879221:-1
position: 7879221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7873252-7873379:-1:exon

position:7873252:-1
position: 7873252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7873379:-1
position: 7873379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7871786-7871849:-1:exon

position:7871786:-1
position: 7871786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7871849:-1
position: 7871849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7869409-7869461:-1:exon

position:7869409:-1
position: 7869409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7869461:-1
position: 7869461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7869213-7869309:-1:exon

position:7869213:-1
position: 7869213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7869309:-1
position: 7869309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7866537-7866649:-1:exon

position:7866537:-1
position: 7866537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7866649:-1
position: 7866649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7861123-7861308:-1:exon

position:7861123:-1
position: 7861123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7861308:-1
position: 7861308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7839301-7839429:-1:exon

position:7839301:-1
position: 7839301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7839429:-1
position: 7839429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7837544-7837618:-1:exon

position:7837544:-1
position: 7837544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7837618:-1
position: 7837618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7833962-7834060:-1:exon

position:7833962:-1
position: 7833962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7834060:-1
position: 7834060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7828093-7828232:-1:exon

position:7828093:-1
position: 7828093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7828232:-1
position: 7828232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7827833-7828013:-1:exon

position:7827833:-1
position: 7827833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7828013:-1
position: 7828013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7817844-7817988:-1:exon

position:7817844:-1
position: 7817844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7817988:-1
position: 7817988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7814501-7814614:-1:exon

position:7814501:-1
position: 7814501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7814614:-1
position: 7814614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7814320-7814415:-1:exon

position:7814320:-1
position: 7814320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7814415:-1
position: 7814415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7807814-7807962:-1:exon

position:7807814:-1
position: 7807814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7807962:-1
position: 7807962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7804455-7804611:-1:exon

position:7804455:-1
position: 7804455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7804611:-1
position: 7804611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7802443-7802557:-1:exon

position:7802443:-1
position: 7802443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7802557:-1
position: 7802557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7796104-7796180:-1:exon

position:7796104:-1
position: 7796104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7796180:-1
position: 7796180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7793501-7793677:-1:exon

position:7793501:-1
position: 7793501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7793677:-1
position: 7793677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7789601-7789690:-1:exon

position:7789601:-1
position: 7789601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7789690:-1
position: 7789690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7788600-7788800:-1:exon

position:7788600:-1
position: 7788600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7788800:-1
position: 7788800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7788178-7788299:-1:exon

position:7788178:-1
position: 7788178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7788299:-1
position: 7788299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7782719-7782932:-1:exon

position:7782719:-1
position: 7782719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7782932:-1
position: 7782932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7780427-7780687:-1:exon

position:7780427:-1
position: 7780427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7780687:-1
position: 7780687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7777969-7778093:-1:exon

position:7777969:-1
position: 7777969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7778093:-1
position: 7778093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7772822-7773041:-1:exon

position:7772822:-1
position: 7772822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7773041:-1
position: 7773041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7771357-7771413:-1:exon

position:7771357:-1
position: 7771357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7771413:-1
position: 7771413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:7763179-7763385:-1:exon

position:7763179:-1
position: 7763179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7763385:-1
position: 7763385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:7762610-7762828:-1:exon

position:7762610:-1
position: 7762610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7762828:-1
position: 7762828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:7760713-7760926:-1:exon

position:7760713:-1
position: 7760713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7760926:-1
position: 7760926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:7754599-7754800:-1:exon

position:7754599:-1
position: 7754599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7754800:-1
position: 7754800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:7752491-7752637:-1:exon

position:7752491:-1
position: 7752491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7752637:-1
position: 7752637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:7752163-7752383:-1:exon

position:7752163:-1
position: 7752163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7752383:-1
position: 7752383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:7749106-7749302:-1:exon

position:7749106:-1
position: 7749106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7749302:-1
position: 7749302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:7746762-7746931:-1:exon

position:7746762:-1
position: 7746762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7746931:-1
position: 7746931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:7746178-7746276:-1:exon

position:7746178:-1
position: 7746178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7746276:-1
position: 7746276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:7744662-7744764:-1:exon

position:7744662:-1
position: 7744662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7744764:-1
position: 7744764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:7742966-7743080:-1:exon

position:7742966:-1
position: 7742966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7743080:-1
position: 7743080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:7741723-7742204:-1:exon

position:7742204:-1
position: 7742204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ak9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Ak9
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: adenylate kinase 9
translation: MASAEKTEEYPFADIFNEDETERSFLLSKPTCFVIFGKPGCGKTTLARNIAQAWKCIRVEALSVLEEITATETEMGTTLQSMLVGGHSIPDELVMKLILEKLKSPEVSHFGYIITEIPTLTQDNLTTLNQVELVKNLELQPDVIINIKCGDYDLCQRISGQRQHSSTGYIYSREQWDPEIIESRRRRKKEPPKDGKSEEEEEEEEQEEEEALIAEMQMVAEMLQHLVQRPEDYLENIENTVKLYKEELLDALEEIMAEHNPQYLIELDGNKSPEDLFTTVIERLKYLNLRRAAIVTKLQSTEEEVTDIVDTEELFRTLSAYKLIAPRYRWHRSRWGRSCPVALKDGNIYSGSADLCVSFLGKMYCLSSEETLKVFSLNPRPCLLPPMPIPPCKIFIFGPRSSGRTTLCNLMAEHFKAKVVDYAEVVQPRFDEARETLIKDTIKEVTNTAIKTVKERLLMELRSKKQEERNLKELQTQYAKKEYEDFMDNKMFKSAEDLQSLDDEATAPSSQKYSSLDILDEDKTRSDYTLVDVDRDVSTEDSIEEVNETHPEVLFMIEDTLRQAKDLNFEQPFEKHTELLEEVIKEVTEDNKNRFPGAPKYGGWIVDNCPTIRDLWTAFIDKGIVPDLVISLTDGENNGKCFLNRMYLKNKSEIDAKVLERLFEELQAKKREEEEIRKAKEEEARLDEEKQRMAEFEGKKAKDGEEADNEADEEVDGEDSEVHDAPEEAEAPEIQENTRGSLLPEESEALEAPEAEHEPESVPEPPEDTAVEAGVRKGSKEVLGPEELPETVVMPEFPEDAYPNVPEMEPLKEELNNYLLMWKHLEQLITDNLIQILTLDISNKTPKELLQRVVETTEKPFQYAAWELNAEDYDEEAEDYQAEIEIDEEQEEEEEEEEEGEEKIKEKRRHLGDTKHFCPVVLKENFILQPGNQEEAVKYREKIYYFSTAEAKEKFLDHPEDYVAQNEPLKAPPIRMCLLGPRGSGKTTCARKLAENFGVFHIQFDEFLQEKLLLKAERKFGPEFEDDSEDEQAAKQELEELAVQANVKIEEESTKKPIPDVQFTEEEEAIKLSLTENEALPSEILDPILSEWWLKEPIRSTGFILDGFPRYPEEAQFLAERGFFPDVAAVIQVEDQDIFDRLLPAQVQKWRQKQRKKAERKKFIKDLKTKIREDMIAKRRAELILERERKKSAFRDDDEFSDDDADEEEDIENILEEEFPKDEEEMSEEDEEHEGDATERLRSELGEKYETDMNNLQVIQEEFEKVLVPIITVNGARKTHIVQYVLNLKVKPLVENRASIFEKCYPVSSHLAHKMLAFTYKHMSSFGYWDPVKLSEGETIKPVENVENPLYPVIHRQYIYFLSNKQSREKFMMNPIKYIRQPKPKATMPVKIMIVGPPKSGKTTVAKKLVSEYGLKRLSVGDALRSMLSNHPETELSLMINWHLHKGMTVPDGLAVQALDLSLMESVCNTIGVVIDGYPVTTNQMNILEARSIIPMVIFELEVPSKEIFKRLLLEKKMEQSTPYPLHNSTQIIAHKNAKYHKNIKEIREFYQEQHQNWHVIDGFHSKWWVWNAIIKDIQQMNKYIQIYMERIKDGKAACIDKLCITPDELIARLGEFGQFCPVSLAESYELNDCSTTNSLEFAAEFRGHYYKMSSKENLNKFLMNPELYVPPLAPHPLPPAAMLPKRLTLSELKSRFPKCAELQGYCPVTYLDGKQRYEALVPGNIQYAAEYRDRIFICETEEKLQKFLRMPMHYWDQKLPYKLPPLKEPIHLTSLPLPGYLEQGTATSLIKAMNAAGCLKPKFPFLSVRRSVLLYVAFHLKAFNPKGSQYSRQKYKKKMEKFVERCELITYLSAKMTRKYKEPQFRAIDFDHKLQTFFSLRNIDPITG
SIO_010081: Ak9
subclass of: SO_0000673
so part of: Ak9
location: complement(join(7742002..7742204,7742966..7743080,7744662..7744764,7746178..7746276,7746762..7746931,7749106..7749302,7752163..7752383,7752491..7752637,7754599..7754800,7760713..7760926,7762610..7762828,7763179..7763385,7771357..7771413,7772822..7773041,7777969..7778093,7780427..7780687,7782719..7782932,7788178..7788299,7788600..7788800,7789601..7789690,7793501..7793677,7796104..7796180,7802443..7802557,7804455..7804611,7807814..7807962,7814320..7814415,7814501..7814614,7817844..7817988,7827833..7828013,7828093..7828232,7833962..7834060,7837544..7837618,7839301..7839429,7861123..7861308,7866537..7866649,7869213..7869309,7869409..7869461,7871786..7871849,7873252..7873368))
location: region:7742002-7873368:-1
so has part: feature:7873252-7873368:-1:exon
so has part: feature:7871786-7871849:-1:exon
so has part: feature:7869409-7869461:-1:exon
so has part: feature:7869213-7869309:-1:exon
so has part: feature:7866537-7866649:-1:exon
so has part: feature:7861123-7861308:-1:exon
so has part: feature:7839301-7839429:-1:exon
so has part: feature:7837544-7837618:-1:exon
so has part: feature:7833962-7834060:-1:exon
so has part: feature:7828093-7828232:-1:exon
so has part: feature:7827833-7828013:-1:exon
so has part: feature:7817844-7817988:-1:exon
so has part: feature:7814501-7814614:-1:exon
so has part: feature:7814320-7814415:-1:exon
so has part: feature:7807814-7807962:-1:exon
so has part: feature:7804455-7804611:-1:exon
so has part: feature:7802443-7802557:-1:exon
so has part: feature:7796104-7796180:-1:exon
so has part: feature:7793501-7793677:-1:exon
so has part: feature:7789601-7789690:-1:exon
so has part: feature:7788600-7788800:-1:exon
so has part: feature:7788178-7788299:-1:exon
so has part: feature:7782719-7782932:-1:exon
so has part: feature:7780427-7780687:-1:exon
so has part: feature:7777969-7778093:-1:exon
so has part: feature:7772822-7773041:-1:exon
so has part: feature:7771357-7771413:-1:exon
so has part: feature:7763179-7763385:-1:exon
so has part: feature:7762610-7762828:-1:exon
so has part: feature:7760713-7760926:-1:exon
so has part: feature:7754599-7754800:-1:exon
so has part: feature:7752491-7752637:-1:exon
so has part: feature:7752163-7752383:-1:exon
so has part: feature:7749106-7749302:-1:exon
so has part: feature:7746762-7746931:-1:exon
so has part: feature:7746178-7746276:-1:exon
so has part: feature:7744662-7744764:-1:exon
so has part: feature:7742966-7743080:-1:exon
so has part: feature:7742002-7742204:-1:exon

XP_037056348.1
type: Protein
SIO_000068: ncbiprotein

position:7742002:-1
position: 7742002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7873368:-1
position: 7873368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7873252-7873368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7871786-7871849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7869409-7869461:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7869213-7869309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7866537-7866649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7861123-7861308:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7839301-7839429:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7837544-7837618:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7833962-7834060:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7828093-7828232:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7827833-7828013:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7817844-7817988:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7814501-7814614:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7814320-7814415:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7807814-7807962:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7804455-7804611:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7802443-7802557:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7796104-7796180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7793501-7793677:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7789601-7789690:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7788600-7788800:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7788178-7788299:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7782719-7782932:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7780427-7780687:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7777969-7778093:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7772822-7773041:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7771357-7771413:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7763179-7763385:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7762610-7762828:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7760713-7760926:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7754599-7754800:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7752491-7752637:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7752163-7752383:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7749106-7749302:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7746762-7746931:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7746178-7746276:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7744662-7744764:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7742966-7743080:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7742002-7742204:-1:exon

Fig4
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Fig4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7880066..7990454
location: region:7880066-7990454:1
so has part: feature:7880066-7990454:1:exon
subclass of: SO_0000010

114707499
type: Gene
SIO_000068: ncbigene

position:7880066:1
position: 7880066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7990454:1
position: 7990454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7880066-7990454:1:exon

Fig4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Fig4
product: FIG4 phosphoinositide 5-phosphatase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_028890232.2
SIO_010081: Fig4
subclass of: SO_0000673
so part of: Fig4
location: join(7880066..7880233,7909233..7909331,7911047..7911170,7912126..7912282,7914548..7914598,7918373..7918521,7922069..7922197,7925572..7925672,7926195..7926357,7926755..7926852,7932509..7932642,7933632..7933748,7935390..7935483,7936530..7936678,7937957..7938123,7947011..7947149,7953336..7953394,7954790..7954937,7957204..7957287,7958645..7958840,7960019..7960101,7962820..7962906,7989841..7990454)
location: region:7880066-7990454:1
so has part: feature:7880066-7880233:1:exon
so has part: feature:7909233-7909331:1:exon
so has part: feature:7911047-7911170:1:exon
so has part: feature:7912126-7912282:1:exon
so has part: feature:7914548-7914598:1:exon
so has part: feature:7918373-7918521:1:exon
so has part: feature:7922069-7922197:1:exon
so has part: feature:7925572-7925672:1:exon
so has part: feature:7926195-7926357:1:exon
so has part: feature:7926755-7926852:1:exon
so has part: feature:7932509-7932642:1:exon
so has part: feature:7933632-7933748:1:exon
so has part: feature:7935390-7935483:1:exon
so has part: feature:7936530-7936678:1:exon
so has part: feature:7937957-7938123:1:exon
so has part: feature:7947011-7947149:1:exon
so has part: feature:7953336-7953394:1:exon
so has part: feature:7954790-7954937:1:exon
so has part: feature:7957204-7957287:1:exon
so has part: feature:7958645-7958840:1:exon
so has part: feature:7960019-7960101:1:exon
so has part: feature:7962820-7962906:1:exon
so has part: feature:7989841-7990454:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7880066-7880233:1:exon

position:7880233:1
position: 7880233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7909233-7909331:1:exon

position:7909233:1
position: 7909233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7909331:1
position: 7909331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7911047-7911170:1:exon

position:7911047:1
position: 7911047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7911170:1
position: 7911170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7912126-7912282:1:exon

position:7912126:1
position: 7912126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7912282:1
position: 7912282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7914548-7914598:1:exon

position:7914548:1
position: 7914548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7914598:1
position: 7914598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7918373-7918521:1:exon

position:7918373:1
position: 7918373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7918521:1
position: 7918521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7922069-7922197:1:exon

position:7922069:1
position: 7922069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7922197:1
position: 7922197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7925572-7925672:1:exon

position:7925572:1
position: 7925572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7925672:1
position: 7925672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7926195-7926357:1:exon

position:7926195:1
position: 7926195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7926357:1
position: 7926357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7926755-7926852:1:exon

position:7926755:1
position: 7926755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7926852:1
position: 7926852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7932509-7932642:1:exon

position:7932509:1
position: 7932509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7932642:1
position: 7932642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7933632-7933748:1:exon

position:7933632:1
position: 7933632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7933748:1
position: 7933748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7935390-7935483:1:exon

position:7935390:1
position: 7935390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7935483:1
position: 7935483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7936530-7936678:1:exon

position:7936530:1
position: 7936530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7936678:1
position: 7936678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7937957-7938123:1:exon

position:7937957:1
position: 7937957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7938123:1
position: 7938123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7947011-7947149:1:exon

position:7947011:1
position: 7947011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7947149:1
position: 7947149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7953336-7953394:1:exon

position:7953336:1
position: 7953336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7953394:1
position: 7953394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7954790-7954937:1:exon

position:7954790:1
position: 7954790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7954937:1
position: 7954937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7957204-7957287:1:exon

position:7957204:1
position: 7957204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7957287:1
position: 7957287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7958645-7958840:1:exon

position:7958645:1
position: 7958645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7958840:1
position: 7958840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7960019-7960101:1:exon

position:7960019:1
position: 7960019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7960101:1
position: 7960101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7962820-7962906:1:exon

position:7962820:1
position: 7962820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7962906:1
position: 7962906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7989841-7990454:1:exon

position:7989841:1
position: 7989841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fig4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Fig4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyphosphoinositide phosphatase
translation: MPTAAAPIISSVQKLVLYETRARYFLVGSNHAETKFRVLKIDRTEPKDLVVIDDRHVYTQQEVRELLGRLDLGNRTKMGQKGSSGLFRAVSAFGIVGFVRFLEGYYIVLITKRRKMADIGGHAIYKIEDTNMIYIPNDSVRITHPDEARYLRIFQNVDLSSNFYFSYSYDLSHSLQYNLTVLRMPLEMLKSETSKTRQESFDIFEDEGLITQGGSGVFGISSEPYMKYVWNGELLDIIKNTVHRDWLLYIIHGFCGQSKLLIYGRPVYVTLIARRSSRFAGTRFLKRGANCEGDVANEVETEQILCDASVMSFTAGSYSSYVQVRGSVPLYWSQDISTMMPKPPITLDQADPFAHVAALHFDQMLQRFGSPIIILNLVKEREKRKHERILSEELVAAVTYLNQFLPPEHTIVYIPWDMAKYTKSKLCNVLDRLNVIAESVVKKTGFFVNRPDSYCSILRPDEKWNELGGCMIPTVGCRYGYYYIQSEHNLRRWYTGILRTNCVDCLDRTNTAQFMVGKCALAYQLYSLGLIDKPNLQFDTDAVRLFEELYEDHGDTLSLQYGGSQLVHRVKTYRKIAPWTQHSKDIMQTLSRYYSNAFSDADRQDSINLFLGVFHPTEGKPHLWELPTDFYLHHKNTMSLSPSRRSYTYWWTPEVIKHLPLPYDEVICAANLKKLVVKKFHRCEEEVDIHNEFFRPYELSSFDDTFCLAMTSSARDFMPKTVGIDPSPFTVRKPDETGKSVLGNKSNREEAVLQRKTAASAPPPPSEEAVSSSSEDDSGTDREDEGSVSQRSTPVKMTDPGDSAKVTENVVQPMKEVYGINLSETLSEEDFSIYARFVQLGQSQHKQDRSSQQPCSRCSDGVIKLTPISAFSQDNIYEVQPPRVDRKSTEIFHAHIQASHGFMQPLGKEDTAMYREYIRNRYL
SIO_010081: Fig4
subclass of: SO_0000673
so part of: Fig4
location: join(7880168..7880233,7909233..7909331,7911047..7911170,7912126..7912282,7914548..7914598,7918373..7918521,7922069..7922197,7925572..7925672,7926195..7926357,7926755..7926852,7932509..7932642,7933632..7933748,7935390..7935483,7936530..7936678,7937957..7938123,7947011..7947149,7953336..7953394,7954790..7954937,7957204..7957287,7958645..7958840,7960019..7960101,7962820..7962906,7989841..7990018)
location: region:7880168-7990018:1
so has part: feature:7880168-7880233:1:exon
so has part: feature:7909233-7909331:1:exon
so has part: feature:7911047-7911170:1:exon
so has part: feature:7912126-7912282:1:exon
so has part: feature:7914548-7914598:1:exon
so has part: feature:7918373-7918521:1:exon
so has part: feature:7922069-7922197:1:exon
so has part: feature:7925572-7925672:1:exon
so has part: feature:7926195-7926357:1:exon
so has part: feature:7926755-7926852:1:exon
so has part: feature:7932509-7932642:1:exon
so has part: feature:7933632-7933748:1:exon
so has part: feature:7935390-7935483:1:exon
so has part: feature:7936530-7936678:1:exon
so has part: feature:7937957-7938123:1:exon
so has part: feature:7947011-7947149:1:exon
so has part: feature:7953336-7953394:1:exon
so has part: feature:7954790-7954937:1:exon
so has part: feature:7957204-7957287:1:exon
so has part: feature:7958645-7958840:1:exon
so has part: feature:7960019-7960101:1:exon
so has part: feature:7962820-7962906:1:exon
so has part: feature:7989841-7990018:1:exon

XP_028746065.1
type: Protein
SIO_000068: ncbiprotein

position:7880168:1
position: 7880168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7990018:1
position: 7990018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7880168-7880233:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7909233-7909331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7911047-7911170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7912126-7912282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7914548-7914598:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7918373-7918521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7922069-7922197:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7925572-7925672:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7926195-7926357:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7926755-7926852:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7932509-7932642:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7933632-7933748:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7935390-7935483:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7936530-7936678:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7937957-7938123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7947011-7947149:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7953336-7953394:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7954790-7954937:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7957204-7957287:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7958645-7958840:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7960019-7960101:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7962820-7962906:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7989841-7990018:1:exon

Gpr6
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Gpr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8094791..8097199
location: region:8094791-8097199:1
so has part: feature:8094791-8097199:1:exon
subclass of: SO_0000010

114707521
type: Gene
SIO_000068: ncbigene

position:8094791:1
position: 8094791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8097199:1
position: 8097199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8094791-8097199:1:exon

Gpr6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Gpr6
product: G protein-coupled receptor 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_028890258.2
SIO_010081: Gpr6
subclass of: SO_0000673
so part of: Gpr6
location: join(8094791..8094983,8095570..8097199)
location: region:8094791-8097199:1
so has part: feature:8094791-8094983:1:exon
so has part: feature:8095570-8097199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8094791-8094983:1:exon

position:8094983:1
position: 8094983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8095570-8097199:1:exon

position:8095570:1
position: 8095570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gpr6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Gpr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 6
translation: MNASAASLNDSQVVAVAAEGAAAAATAAGAPDTSEWGPPAASAALGGGGGPNGSLELSSQLPAGPSGLLLSAVNPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYVVPSETVSLLMVGFLVASFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLALGLLPVLGWNCLADRSSCSVVRPLTRSHVALLSTSFFVVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSQEDPAIYTYATLLPATYNSMINPIIYAFRNQEIQRALWLLFCGCFQSKVPFRSRSPSEV
SIO_010081: Gpr6
subclass of: SO_0000673
so part of: Gpr6
location: 8095588..8096679
location: region:8095588-8096679:1
so has part: feature:8095588-8096679:1:exon

XP_028746091.1
type: Protein
SIO_000068: ncbiprotein

position:8095588:1
position: 8095588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8096679:1
position: 8096679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8095588-8096679:1:exon

LOC114707494
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114707494
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8130852..8131124
location: region:8130852-8131124:1
so has part: feature:8130852-8131124:1:exon
subclass of: SO_0000010

114707494
type: Gene
SIO_000068: ncbigene

position:8130852:1
position: 8130852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8131124:1
position: 8131124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8130852-8131124:1:exon

LOC114707494
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114707494
product: non-histone chromosomal protein HMG-17-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037200497.1
SIO_010081: LOC114707494
subclass of: SO_0000673
so part of: LOC114707494
location: 8130852..8131124
location: region:8130852-8131124:1
so has part: feature:8130852-8131124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8130852-8131124:1:exon

LOC114707494
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114707494
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: non-histone chromosomal protein HMG-17-like
translation: MPQRKAERDTEGDKGKMKDKPQRRSARLSAKPALPKPEPKPKKAPAKKGEKVPKGKKEKVDAGKDTNNPAENGDSKADQAQKAGGTGDTK
SIO_010081: LOC114707494
subclass of: SO_0000673
so part of: LOC114707494
location: 8130852..8131124
location: region:8130852-8131124:1
so has part: feature:8130852-8131124:1:exon

XP_037056392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8130852-8131124:1:exon

Wasf1
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Wasf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8206142..8257032)
location: region:8206142-8257032:-1
so has part: feature:8206142-8257032:-1:exon
subclass of: SO_0000010

114707507
type: Gene
SIO_000068: ncbigene

position:8206142:-1
position: 8206142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8257032:-1
position: 8257032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8206142-8257032:-1:exon

Wasf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Wasf1
product: WASP family member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_028890245.2
SIO_010081: Wasf1
subclass of: SO_0000673
so part of: Wasf1
location: complement(join(8206142..8207005,8208050..8208678,8210136..8210315,8211621..8211790,8212895..8213012,8214238..8214391,8218255..8218389,8220063..8220223,8256439..8257032))
location: region:8206142-8257032:-1
so has part: feature:8256439-8257032:-1:exon
so has part: feature:8220063-8220223:-1:exon
so has part: feature:8218255-8218389:-1:exon
so has part: feature:8214238-8214391:-1:exon
so has part: feature:8212895-8213012:-1:exon
so has part: feature:8211621-8211790:-1:exon
so has part: feature:8210136-8210315:-1:exon
so has part: feature:8208050-8208678:-1:exon
so has part: feature:8206142-8207005:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8256439-8257032:-1:exon

position:8256439:-1
position: 8256439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8220063-8220223:-1:exon

position:8220063:-1
position: 8220063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8220223:-1
position: 8220223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8218255-8218389:-1:exon

position:8218255:-1
position: 8218255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8218389:-1
position: 8218389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8214238-8214391:-1:exon

position:8214238:-1
position: 8214238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8214391:-1
position: 8214391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8212895-8213012:-1:exon

position:8212895:-1
position: 8212895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8213012:-1
position: 8213012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8211621-8211790:-1:exon

position:8211621:-1
position: 8211621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8211790:-1
position: 8211790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8210136-8210315:-1:exon

position:8210136:-1
position: 8210136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8210315:-1
position: 8210315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8208050-8208678:-1:exon

position:8208050:-1
position: 8208050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8208678:-1
position: 8208678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8206142-8207005:-1:exon

position:8207005:-1
position: 8207005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Wasf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Wasf1
product: WASP family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_028890243.2
SIO_010081: Wasf1
subclass of: SO_0000673
so part of: Wasf1
location: complement(join(8206142..8207005,8208050..8208678,8210136..8210315,8211621..8211793,8212895..8213012,8214238..8214391,8218255..8218389,8220063..8220223,8256439..8257031))
location: region:8206142-8257031:-1
so has part: feature:8256439-8257031:-1:exon
so has part: feature:8220063-8220223:-1:exon
so has part: feature:8218255-8218389:-1:exon
so has part: feature:8214238-8214391:-1:exon
so has part: feature:8212895-8213012:-1:exon
so has part: feature:8211621-8211793:-1:exon
so has part: feature:8210136-8210315:-1:exon
so has part: feature:8208050-8208678:-1:exon
so has part: feature:8206142-8207005:-1:exon

position:8257031:-1
position: 8257031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8256439-8257031:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8220063-8220223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8218255-8218389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8214238-8214391:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8212895-8213012:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8211621-8211793:-1:exon

position:8211793:-1
position: 8211793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8210136-8210315:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8208050-8208678:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8206142-8207005:-1:exon

Wasf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Wasf1
product: WASP family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_028890244.2
SIO_010081: Wasf1
subclass of: SO_0000673
so part of: Wasf1
location: complement(join(8206142..8207005,8208050..8208678,8210136..8210315,8211621..8211793,8212895..8213012,8214238..8214391,8218255..8218389,8220063..8220223,8235841..8235932,8256439..8257031))
location: region:8206142-8257031:-1
so has part: feature:8256439-8257031:-1:exon
so has part: feature:8235841-8235932:-1:exon
so has part: feature:8220063-8220223:-1:exon
so has part: feature:8218255-8218389:-1:exon
so has part: feature:8214238-8214391:-1:exon
so has part: feature:8212895-8213012:-1:exon
so has part: feature:8211621-8211793:-1:exon
so has part: feature:8210136-8210315:-1:exon
so has part: feature:8208050-8208678:-1:exon
so has part: feature:8206142-8207005:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8256439-8257031:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8235841-8235932:-1:exon

position:8235841:-1
position: 8235841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8235932:-1
position: 8235932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8220063-8220223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8218255-8218389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8214238-8214391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8212895-8213012:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8211621-8211793:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8210136-8210315:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8208050-8208678:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8206142-8207005:-1:exon

Wasf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Wasf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 1 isoform X2
translation: MPLVKRNIDPRHLCHTALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFGELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPKEEELSLQDITMRKAFRSSTIQDQQLFDRKTLPIPLQETYDVCEQPPPLNILTPYRDDGKEGLKFYTNPSYFFDLWKEKMLQDTEDKRKEKRKQKKNLDRPHEPEKVPRAPHDRRREWQKLAQGPELAEDDADLLHKHIEVANGPASHFETRPQTYVDHMDGSYSLSALPFSQMSELLTRAEERVLVRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPAAGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVAALAHPPSGLHPAPSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVATILSRRIAVEYSDSEDDSEFDEVDWLE
SIO_010081: Wasf1
subclass of: SO_0000673
so part of: Wasf1
location: complement(join(8206848..8207005,8208050..8208678,8210136..8210315,8211621..8211790,8212895..8213012,8214238..8214391,8218255..8218389,8220063..8220195))
location: region:8206848-8220195:-1
so has part: feature:8220063-8220195:-1:exon
so has part: feature:8218255-8218389:-1:exon
so has part: feature:8214238-8214391:-1:exon
so has part: feature:8212895-8213012:-1:exon
so has part: feature:8211621-8211790:-1:exon
so has part: feature:8210136-8210315:-1:exon
so has part: feature:8208050-8208678:-1:exon
so has part: feature:8206848-8207005:-1:exon

XP_028746078.1
type: Protein
SIO_000068: ncbiprotein

position:8206848:-1
position: 8206848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8220195:-1
position: 8220195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8220063-8220195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8218255-8218389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8214238-8214391:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8212895-8213012:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8211621-8211790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8210136-8210315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8208050-8208678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8206848-8207005:-1:exon

Wasf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Wasf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 1 isoform X1
translation: MPLVKRNIDPRHLCHTALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFGELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPKEEELSLQDITMRKAFRSSTIQDQQLFDRKTLPIPLQETYDVCEQPPPLNILTPYRDDGKEGLKFYTNPSYFFDLWKEKMLQDTEDKRKEKRKQKQKNLDRPHEPEKVPRAPHDRRREWQKLAQGPELAEDDADLLHKHIEVANGPASHFETRPQTYVDHMDGSYSLSALPFSQMSELLTRAEERVLVRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPAAGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVAALAHPPSGLHPAPSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVATILSRRIAVEYSDSEDDSEFDEVDWLE
SIO_010081: Wasf1
subclass of: SO_0000673
so part of: Wasf1
location: complement(join(8206848..8207005,8208050..8208678,8210136..8210315,8211621..8211793,8212895..8213012,8214238..8214391,8218255..8218389,8220063..8220195))
location: region:8206848-8220195:-1
so has part: feature:8220063-8220195:-1:exon
so has part: feature:8218255-8218389:-1:exon
so has part: feature:8214238-8214391:-1:exon
so has part: feature:8212895-8213012:-1:exon
so has part: feature:8211621-8211793:-1:exon
so has part: feature:8210136-8210315:-1:exon
so has part: feature:8208050-8208678:-1:exon
so has part: feature:8206848-8207005:-1:exon

XP_028746076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8220063-8220195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8218255-8218389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8214238-8214391:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8212895-8213012:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8211621-8211793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8210136-8210315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8208050-8208678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8206848-8207005:-1:exon

Wasf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Wasf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 1 isoform X1
translation: MPLVKRNIDPRHLCHTALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFGELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPKEEELSLQDITMRKAFRSSTIQDQQLFDRKTLPIPLQETYDVCEQPPPLNILTPYRDDGKEGLKFYTNPSYFFDLWKEKMLQDTEDKRKEKRKQKQKNLDRPHEPEKVPRAPHDRRREWQKLAQGPELAEDDADLLHKHIEVANGPASHFETRPQTYVDHMDGSYSLSALPFSQMSELLTRAEERVLVRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPAAGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVAALAHPPSGLHPAPSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVATILSRRIAVEYSDSEDDSEFDEVDWLE
SIO_010081: Wasf1
subclass of: SO_0000673
so part of: Wasf1
location: complement(join(8206848..8207005,8208050..8208678,8210136..8210315,8211621..8211793,8212895..8213012,8214238..8214391,8218255..8218389,8220063..8220195))
location: region:8206848-8220195:-1
so has part: feature:8220063-8220195:-1:exon
so has part: feature:8218255-8218389:-1:exon
so has part: feature:8214238-8214391:-1:exon
so has part: feature:8212895-8213012:-1:exon
so has part: feature:8211621-8211793:-1:exon
so has part: feature:8210136-8210315:-1:exon
so has part: feature:8208050-8208678:-1:exon
so has part: feature:8206848-8207005:-1:exon

XP_028746077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8220063-8220195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8218255-8218389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8214238-8214391:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8212895-8213012:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8211621-8211793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8210136-8210315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8208050-8208678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8206848-8207005:-1:exon

LOC114707500
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114707500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8225524..8230352)
location: region:8225524-8230352:-1
so has part: feature:8225524-8230352:-1:exon

114707500
type: Gene
SIO_000068: ncbigene

position:8225524:-1
position: 8225524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8230352:-1
position: 8230352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8225524-8230352:-1:exon

LOC114707500
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114707500
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114707500
subclass of: SO_0000673
so part of: LOC114707500
location: complement(8225524..8226945)
location: region:8225524-8226945:-1
so has part: feature:8225524-8226945:-1:exon

position:8226945:-1
position: 8226945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8225524-8226945:-1:exon

LOC114707500
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114707500
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114707500
subclass of: SO_0000673
so part of: LOC114707500
location: complement(8230206..8230352)
location: region:8230206-8230352:-1
so has part: feature:8230206-8230352:-1:exon

position:8230206:-1
position: 8230206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8230206-8230352:-1:exon

Cdc40
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Cdc40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8257185..8311730
location: region:8257185-8311730:1
so has part: feature:8257185-8311730:1:exon
subclass of: SO_0000010

114707506
type: Gene
SIO_000068: ncbigene

position:8257185:1
position: 8257185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8311730:1
position: 8311730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8257185-8311730:1:exon

Cdc40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cdc40
product: cell division cycle 40
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 91 samples with support for all annotated introns
transcript id: XM_028890242.2
SIO_010081: Cdc40
subclass of: SO_0000673
so part of: Cdc40
location: join(8257185..8257646,8276421..8276507,8285301..8285430,8291039..8291122,8292679..8292818,8293971..8294067,8296309..8296448,8297197..8297271,8299261..8299306,8301205..8301306,8302576..8302691,8302910..8303043,8307472..8307548,8309227..8309371,8310176..8311730)
location: region:8257185-8311730:1
so has part: feature:8257185-8257646:1:exon
so has part: feature:8276421-8276507:1:exon
so has part: feature:8285301-8285430:1:exon
so has part: feature:8291039-8291122:1:exon
so has part: feature:8292679-8292818:1:exon
so has part: feature:8293971-8294067:1:exon
so has part: feature:8296309-8296448:1:exon
so has part: feature:8297197-8297271:1:exon
so has part: feature:8299261-8299306:1:exon
so has part: feature:8301205-8301306:1:exon
so has part: feature:8302576-8302691:1:exon
so has part: feature:8302910-8303043:1:exon
so has part: feature:8307472-8307548:1:exon
so has part: feature:8309227-8309371:1:exon
so has part: feature:8310176-8311730:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8257185-8257646:1:exon

position:8257646:1
position: 8257646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8276421-8276507:1:exon

position:8276421:1
position: 8276421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8276507:1
position: 8276507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8285301-8285430:1:exon

position:8285301:1
position: 8285301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8285430:1
position: 8285430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8291039-8291122:1:exon

position:8291039:1
position: 8291039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8291122:1
position: 8291122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8292679-8292818:1:exon

position:8292679:1
position: 8292679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8292818:1
position: 8292818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8293971-8294067:1:exon

position:8293971:1
position: 8293971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8294067:1
position: 8294067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8296309-8296448:1:exon

position:8296309:1
position: 8296309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8296448:1
position: 8296448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8297197-8297271:1:exon

position:8297197:1
position: 8297197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8297271:1
position: 8297271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8299261-8299306:1:exon

position:8299261:1
position: 8299261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8299306:1
position: 8299306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8301205-8301306:1:exon

position:8301205:1
position: 8301205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8301306:1
position: 8301306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8302576-8302691:1:exon

position:8302576:1
position: 8302576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8302691:1
position: 8302691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8302910-8303043:1:exon

position:8302910:1
position: 8302910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8303043:1
position: 8303043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8307472-8307548:1:exon

position:8307472:1
position: 8307472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8307548:1
position: 8307548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8309227-8309371:1:exon

position:8309227:1
position: 8309227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8309371:1
position: 8309371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8310176-8311730:1:exon

position:8310176:1
position: 8310176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cdc40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cdc40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-processing factor 17
translation: MSAAIAALAASYGSGSGSESDSDSEGSRCPLPAADSLMHLTKSPSAKPSLTVAVDSAPEVAVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEERPGEEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
SIO_010081: Cdc40
subclass of: SO_0000673
so part of: Cdc40
location: join(8257458..8257646,8276421..8276507,8285301..8285430,8291039..8291122,8292679..8292818,8293971..8294067,8296309..8296448,8297197..8297271,8299261..8299306,8301205..8301306,8302576..8302691,8302910..8303043,8307472..8307548,8309227..8309371,8310176..8310353)
location: region:8257458-8310353:1
so has part: feature:8257458-8257646:1:exon
so has part: feature:8276421-8276507:1:exon
so has part: feature:8285301-8285430:1:exon
so has part: feature:8291039-8291122:1:exon
so has part: feature:8292679-8292818:1:exon
so has part: feature:8293971-8294067:1:exon
so has part: feature:8296309-8296448:1:exon
so has part: feature:8297197-8297271:1:exon
so has part: feature:8299261-8299306:1:exon
so has part: feature:8301205-8301306:1:exon
so has part: feature:8302576-8302691:1:exon
so has part: feature:8302910-8303043:1:exon
so has part: feature:8307472-8307548:1:exon
so has part: feature:8309227-8309371:1:exon
so has part: feature:8310176-8310353:1:exon

XP_028746075.1
type: Protein
SIO_000068: ncbiprotein

position:8257458:1
position: 8257458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8310353:1
position: 8310353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8257458-8257646:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8276421-8276507:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8285301-8285430:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8291039-8291122:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8292679-8292818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8293971-8294067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8296309-8296448:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8297197-8297271:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8299261-8299306:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8301205-8301306:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8302576-8302691:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8302910-8303043:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8307472-8307548:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8309227-8309371:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8310176-8310353:1:exon

Mettl24
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Mettl24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8333483..8440052)
location: region:8333483-8440052:-1
so has part: feature:8333483-8440052:-1:exon
subclass of: SO_0000010

114707502
type: Gene
SIO_000068: ncbigene

position:8333483:-1
position: 8333483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8440052:-1
position: 8440052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8333483-8440052:-1:exon

Mettl24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Mettl24
product: methyltransferase like 24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_028890235.2
SIO_010081: Mettl24
subclass of: SO_0000673
so part of: Mettl24
location: complement(join(8333483..8334418,8385235..8385463,8396979..8397118,8404594..8404692,8439219..8440052))
location: region:8333483-8440052:-1
so has part: feature:8439219-8440052:-1:exon
so has part: feature:8404594-8404692:-1:exon
so has part: feature:8396979-8397118:-1:exon
so has part: feature:8385235-8385463:-1:exon
so has part: feature:8333483-8334418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8439219-8440052:-1:exon

position:8439219:-1
position: 8439219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8404594-8404692:-1:exon

position:8404594:-1
position: 8404594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8404692:-1
position: 8404692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8396979-8397118:-1:exon

position:8396979:-1
position: 8396979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8397118:-1
position: 8397118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8385235-8385463:-1:exon

position:8385235:-1
position: 8385235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8385463:-1
position: 8385463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8333483-8334418:-1:exon

position:8334418:-1
position: 8334418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mettl24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Mettl24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 24
translation: MATARPPGRGCGALPRWLLGAALLLGLRLCMELHRAGSGSPGRSDPPGPPRPHLLPAPGPPRGARRRQVTYVRSGRRALPRGGGSTTLEPSCCTPRELPRRKGPRWHIELQPWAGPAQSLDEEASRFLSYISTTQIACDRMGADSLATDSSPATRPWLVCLDDRFGLAHQIRSKRCRLYSLGLGNDDTHFEVSMAKDGCEVHRFDPSVKSAHVLESRRLWHHRLAIDWRDPHPAVAAQKLHSNTRKLGSILNEFGHHKDIQSRVPRVRCRSRDIRQSLLSWSDYMWCLCTFSCVQL
SIO_010081: Mettl24
subclass of: SO_0000673
so part of: Mettl24
location: complement(join(8334302..8334418,8385235..8385463,8396979..8397118,8404594..8404692,8439219..8439524))
location: region:8334302-8439524:-1
so has part: feature:8439219-8439524:-1:exon
so has part: feature:8404594-8404692:-1:exon
so has part: feature:8396979-8397118:-1:exon
so has part: feature:8385235-8385463:-1:exon
so has part: feature:8334302-8334418:-1:exon

XP_028746068.2
type: Protein
SIO_000068: ncbiprotein

position:8334302:-1
position: 8334302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8439524:-1
position: 8439524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8439219-8439524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8404594-8404692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8396979-8397118:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8385235-8385463:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8334302-8334418:-1:exon

LOC114707513
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114707513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8466778..8467777
location: region:8466778-8467777:1
so has part: feature:8466778-8467777:1:exon
subclass of: SO_0000010

114707513
type: Gene
SIO_000068: ncbigene

position:8466778:1
position: 8466778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8467777:1
position: 8467777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8466778-8467777:1:exon

LOC114707513
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114707513
product: putative monooxygenase p33MONOX
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037200329.1
SIO_010081: LOC114707513
subclass of: SO_0000673
so part of: LOC114707513
location: 8466778..8467777
location: region:8466778-8467777:1
so has part: feature:8466778-8467777:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8466778-8467777:1:exon

LOC114707513
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114707513
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: putative monooxygenase p33MONOX
translation: MSLPIGMCHRAFSYDDALEDPAPMTPPPPSDMGSIPWKPVIPERNDKHLDKTEEGVASVSSLAVIPSTATDNSEKASVVKAKATHVIMNSLITKQTQESIQHFEQQAGLRDTGYTPHKGLTTEETKYLRVAEALHKLKLQSGETTKEEKHPASAQSTLNSTPYSSPKQKSRGWFPCDSSTALPGPNSHTMDPGSGNDKNSAEKGSLFGSRPLQRSDSGFAIQAYKGAPKPSPMELMHAQATRVGDDPATFKPPKMDIPVVEVKKPPPRTHNLKLRDLNVLTPTGF
SIO_010081: LOC114707513
subclass of: SO_0000673
so part of: LOC114707513
location: 8466813..8467671
location: region:8466813-8467671:1
so has part: feature:8466813-8467671:1:exon

XP_037056224.1
type: Protein
SIO_000068: ncbiprotein

position:8466813:1
position: 8466813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8467671:1
position: 8467671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8466813-8467671:1:exon

Ddo
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Ddo
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8485657..8505091)
location: region:8485657-8505091:-1
so has part: feature:8485657-8505091:-1:exon
subclass of: SO_0000010

114707515
type: Gene
SIO_000068: ncbigene

position:8485657:-1
position: 8485657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8505091:-1
position: 8505091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8485657-8505091:-1:exon

Ddo
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Ddo
product: D-aspartate oxidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_028890252.2
SIO_010081: Ddo
subclass of: SO_0000673
so part of: Ddo
location: complement(join(8485657..8486449,8497508..8497684,8504727..8505091))
location: region:8485657-8505091:-1
so has part: feature:8504727-8505091:-1:exon
so has part: feature:8497508-8497684:-1:exon
so has part: feature:8485657-8486449:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8504727-8505091:-1:exon

position:8504727:-1
position: 8504727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8497508-8497684:-1:exon

position:8497508:-1
position: 8497508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8497684:-1
position: 8497684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8485657-8486449:-1:exon

position:8486449:-1
position: 8486449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ddo
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Ddo
product: D-aspartate oxidase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_028890251.2
SIO_010081: Ddo
subclass of: SO_0000673
so part of: Ddo
location: complement(join(8485657..8486449,8497508..8497684,8501263..8501371,8502723..8502897,8504727..8505090))
location: region:8485657-8505090:-1
so has part: feature:8504727-8505090:-1:exon
so has part: feature:8502723-8502897:-1:exon
so has part: feature:8501263-8501371:-1:exon
so has part: feature:8497508-8497684:-1:exon
so has part: feature:8485657-8486449:-1:exon

position:8505090:-1
position: 8505090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8504727-8505090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8502723-8502897:-1:exon

position:8502723:-1
position: 8502723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8502897:-1
position: 8502897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8501263-8501371:-1:exon

position:8501263:-1
position: 8501263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8501371:-1
position: 8501371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8497508-8497684:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8485657-8486449:-1:exon

Ddo
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Ddo
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D-aspartate oxidase isoform X1
translation: MDTVRIAVVGAGVIGLSTAVCISQLVPRCSVTVISDKFTPDTTSNVAAGMLIPHTYPDTPVPTQKQWFTETFRHLSAIAESAEAADAGVHLVSGWQVFRSVPTEEVPFWADVVLGFRRMAEAELKRFPQYVFGQAFTTLKCETSVYLPWLEKRLKERGGLLLTRRIEDLWELRPSFDLVVNCSGLGSRQLVGDSTISPVRGQVLQAQAPWVKHFIRDGSGLTYVYPGTSYVTLGGTRHKGDWNLSPDAELSREIFSRCCALEPSLRRASNIKEKVGLRPSRPGVRLQKEMLVRGGQRLPVVHNYGHGSGGVSVHWGSALEATRLVMEWIHTLRTPATVSKL
SIO_010081: Ddo
subclass of: SO_0000673
so part of: Ddo
location: complement(join(8485882..8486449,8497508..8497684,8501263..8501371,8502723..8502894))
location: region:8485882-8502894:-1
so has part: feature:8502723-8502894:-1:exon
so has part: feature:8501263-8501371:-1:exon
so has part: feature:8497508-8497684:-1:exon
so has part: feature:8485882-8486449:-1:exon

XP_028746084.1
type: Protein
SIO_000068: ncbiprotein

position:8485882:-1
position: 8485882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8502894:-1
position: 8502894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8502723-8502894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8501263-8501371:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8497508-8497684:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8485882-8486449:-1:exon

Ddo
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Ddo
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D-aspartate oxidase isoform X2
translation: MAEAELKRFPQYVFGQAFTTLKCETSVYLPWLEKRLKERGGLLLTRRIEDLWELRPSFDLVVNCSGLGSRQLVGDSTISPVRGQVLQAQAPWVKHFIRDGSGLTYVYPGTSYVTLGGTRHKGDWNLSPDAELSREIFSRCCALEPSLRRASNIKEKVGLRPSRPGVRLQKEMLVRGGQRLPVVHNYGHGSGGVSVHWGSALEATRLVMEWIHTLRTPATVSKL
SIO_010081: Ddo
subclass of: SO_0000673
so part of: Ddo
location: complement(join(8485882..8486449,8497508..8497611))
location: region:8485882-8497611:-1
so has part: feature:8497508-8497611:-1:exon
so has part: feature:8485882-8486449:-1:exon

XP_028746085.1
type: Protein
SIO_000068: ncbiprotein

position:8497611:-1
position: 8497611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8497508-8497611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8485882-8486449:-1:exon

Slc22a16
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Slc22a16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8532979..8557683)
location: region:8532979-8557683:-1
so has part: feature:8532979-8557683:-1:exon
subclass of: SO_0000010

114707501
type: Gene
SIO_000068: ncbigene

position:8532979:-1
position: 8532979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8557683:-1
position: 8557683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8532979-8557683:-1:exon

Slc22a16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Slc22a16
product: solute carrier family 22 member 16
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 4 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_028890234.1
SIO_010081: Slc22a16
subclass of: SO_0000673
so part of: Slc22a16
location: complement(join(8532979..8533089,8537719..8537837,8539992..8540511,8544144..8544294,8551132..8551580,8557631..8557683))
location: region:8532979-8557683:-1
so has part: feature:8557631-8557683:-1:exon
so has part: feature:8551132-8551580:-1:exon
so has part: feature:8544144-8544294:-1:exon
so has part: feature:8539992-8540511:-1:exon
so has part: feature:8537719-8537837:-1:exon
so has part: feature:8532979-8533089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8557631-8557683:-1:exon

position:8557631:-1
position: 8557631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8551132-8551580:-1:exon

position:8551132:-1
position: 8551132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8551580:-1
position: 8551580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8544144-8544294:-1:exon

position:8544144:-1
position: 8544144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8544294:-1
position: 8544294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8539992-8540511:-1:exon

position:8539992:-1
position: 8539992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8540511:-1
position: 8540511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8537719-8537837:-1:exon

position:8537719:-1
position: 8537719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8537837:-1
position: 8537837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8532979-8533089:-1:exon

position:8533089:-1
position: 8533089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slc22a16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Slc22a16
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 4 codons; deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(8544282..8544284),aa:OTHER)
product: LOW QUALITY PROTEIN: solute carrier family 22 member 16
translation: MESCNVELIVDHVGHLGRFQTVLHLIRVCQNISCGIQYTSXYPEHASKPPGKVRKAIFHNLSXLEVEDILALRSPDQKDHVRVELQDGEIWELTDVXQDWRENTSHLGYECSDYNLDXCYVCDQIKCRSSVGSSLNLVCNQKWYANMIQLLFIFGMLLGAIIFGYLSDRFRRXVALLVHEQWCGFCVCLFVCFFRVASIHIFDYFSFMAARFFLAMMSCPASGCFVVVFVYMMEFIGKKSRTWASMHLDTFFGIGVMLVALASYLVKTRWLYQIILCTVTAPFIPCYWMLPETPAWLLSEGRYREAQGTVDTMAEWDESGSCHLEELLSLDMNRSCGKNCKGIRKLGLADLFCDPDVAKRTPIIWLVFFTASFGYYLTIWGREHEYLYLFLVGAVEIPAYFFMLKRVGRRNTVDFCLLSALLTRAVYVAMPLSQDFEDVAVVAVKTAIGSVFAFIYVYTAELCPTIVR
SIO_010081: Slc22a16
subclass of: SO_0000673
so part of: Slc22a16
location: complement(join(8532979..8533089,8537719..8537837,8539992..8540511,8544144..8544294,8551132..8551580,8557631..8557683))
location: region:8532979-8557683:-1
so has part: feature:8557631-8557683:-1:exon
so has part: feature:8551132-8551580:-1:exon
so has part: feature:8544144-8544294:-1:exon
so has part: feature:8539992-8540511:-1:exon
so has part: feature:8537719-8537837:-1:exon
so has part: feature:8532979-8533089:-1:exon

XP_028746067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8557631-8557683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8551132-8551580:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8544144-8544294:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8539992-8540511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8537719-8537837:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8532979-8533089:-1:exon

Cdk19
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Cdk19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8623764..8751875)
location: region:8623764-8751875:-1
so has part: feature:8623764-8751875:-1:exon
subclass of: SO_0000010

114707496
type: Gene
SIO_000068: ncbigene

position:8623764:-1
position: 8623764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8751875:-1
position: 8751875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8623764-8751875:-1:exon

Cdk19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cdk19
product: cyclin dependent kinase 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_037200413.1
SIO_010081: Cdk19
subclass of: SO_0000673
so part of: Cdk19
location: complement(join(8623764..8627971,8629775..8630041,8630669..8630747,8631317..8631414,8631954..8632026,8637785..8637854,8638010..8638153,8641939..8642070,8654330..8654387,8672969..8673109,8674948..8675058,8713229..8713304,8751748..8751875))
location: region:8623764-8751875:-1
so has part: feature:8751748-8751875:-1:exon
so has part: feature:8713229-8713304:-1:exon
so has part: feature:8674948-8675058:-1:exon
so has part: feature:8672969-8673109:-1:exon
so has part: feature:8654330-8654387:-1:exon
so has part: feature:8641939-8642070:-1:exon
so has part: feature:8638010-8638153:-1:exon
so has part: feature:8637785-8637854:-1:exon
so has part: feature:8631954-8632026:-1:exon
so has part: feature:8631317-8631414:-1:exon
so has part: feature:8630669-8630747:-1:exon
so has part: feature:8629775-8630041:-1:exon
so has part: feature:8623764-8627971:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8751748-8751875:-1:exon

position:8751748:-1
position: 8751748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8713229-8713304:-1:exon

position:8713229:-1
position: 8713229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8713304:-1
position: 8713304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8674948-8675058:-1:exon

position:8674948:-1
position: 8674948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8675058:-1
position: 8675058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8672969-8673109:-1:exon

position:8672969:-1
position: 8672969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8673109:-1
position: 8673109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8654330-8654387:-1:exon

position:8654330:-1
position: 8654330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8654387:-1
position: 8654387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8641939-8642070:-1:exon

position:8641939:-1
position: 8641939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8642070:-1
position: 8642070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8638010-8638153:-1:exon

position:8638010:-1
position: 8638010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8638153:-1
position: 8638153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8637785-8637854:-1:exon

position:8637785:-1
position: 8637785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8637854:-1
position: 8637854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8631954-8632026:-1:exon

position:8631954:-1
position: 8631954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8632026:-1
position: 8632026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8631317-8631414:-1:exon

position:8631317:-1
position: 8631317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8631414:-1
position: 8631414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8630669-8630747:-1:exon

position:8630669:-1
position: 8630669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8630747:-1
position: 8630747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8629775-8630041:-1:exon

position:8629775:-1
position: 8629775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8630041:-1
position: 8630041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8623764-8627971:-1:exon

position:8627971:-1
position: 8627971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cdk19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cdk19
product: cyclin dependent kinase 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_028890230.2
SIO_010081: Cdk19
subclass of: SO_0000673
so part of: Cdk19
location: complement(join(8623764..8627971,8629775..8630041,8630669..8630747,8631317..8631414,8631954..8632026,8637785..8637854,8638010..8638153,8641939..8642070,8672969..8673048))
location: region:8623764-8673048:-1
so has part: feature:8672969-8673048:-1:exon
so has part: feature:8641939-8642070:-1:exon
so has part: feature:8638010-8638153:-1:exon
so has part: feature:8637785-8637854:-1:exon
so has part: feature:8631954-8632026:-1:exon
so has part: feature:8631317-8631414:-1:exon
so has part: feature:8630669-8630747:-1:exon
so has part: feature:8629775-8630041:-1:exon
so has part: feature:8623764-8627971:-1:exon

position:8673048:-1
position: 8673048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8672969-8673048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8641939-8642070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8638010-8638153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8637785-8637854:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8631954-8632026:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8631317-8631414:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8630669-8630747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8629775-8630041:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8623764-8627971:-1:exon

Cdk19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cdk19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 19 isoform X1
translation: MDYDFKAKLAAERERVEDLFEYEGCKVGRGTYGHVYKARRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLLKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYFQEDPLPTLDVFAGCQIPYPKREFLNEDEPEEKGEKNQPQQQNPHQQAAAPPQQAAAPPQAPPPPQSSAQTNGTAGGAAAGGAGAGAGLQPGQDSGLNQVPPNKKPRIGPSGASSGGPVMPSDYQHSSSRLNYQSSVQGSSQSQSALGYASSQQSAQYHPSHQTHRY
SIO_010081: Cdk19
subclass of: SO_0000673
so part of: Cdk19
location: complement(join(8627843..8627971,8629775..8630041,8630669..8630747,8631317..8631414,8631954..8632026,8637785..8637854,8638010..8638153,8641939..8642070,8654330..8654387,8672969..8673109,8674948..8675058,8713229..8713304,8751748..8751875))
location: region:8627843-8751875:-1
so has part: feature:8751748-8751875:-1:exon
so has part: feature:8713229-8713304:-1:exon
so has part: feature:8674948-8675058:-1:exon
so has part: feature:8672969-8673109:-1:exon
so has part: feature:8654330-8654387:-1:exon
so has part: feature:8641939-8642070:-1:exon
so has part: feature:8638010-8638153:-1:exon
so has part: feature:8637785-8637854:-1:exon
so has part: feature:8631954-8632026:-1:exon
so has part: feature:8631317-8631414:-1:exon
so has part: feature:8630669-8630747:-1:exon
so has part: feature:8629775-8630041:-1:exon
so has part: feature:8627843-8627971:-1:exon

XP_037056308.1
type: Protein
SIO_000068: ncbiprotein

position:8627843:-1
position: 8627843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8751748-8751875:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8713229-8713304:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8674948-8675058:-1:exon