Peromyscus leucopus breed LL Stock chromosome 11, UCI_PerLeu_2.1, whole genome shotgun sequence.
type: Entry
definition: Peromyscus leucopus breed LL Stock chromosome 11, UCI_PerLeu_2.1, whole genome shotgun sequence.
sequence version: NC_051072.1
sequence date: 2020-11-06
sequence: sequence
division: CON
label: NC_051072.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA533285
dblink: SAMN03488028
keyword: WGS
keyword: RefSeq
source: Peromyscus leucopus (white-footed mouse)
organism: Peromyscus leucopus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus.
reference: 1
references: 31355335
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM026050.1.\nAssembly name: UCI_PerLeu_2.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of California\nIrvine on 2020/10/02. The original whole-genome shotgun project has\nthe accession NMRJ00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of California Irvine\nAssembly Date :: 2020\nAssembly Method :: custom method described in paper v.\n 02/14/20\nAssembly Name :: UCI_PerLeu_2.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina; PacBio; HiC-Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Peromyscus leucopus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 69407300
topology: linear
so has quality: SO_0000987
location: 1..69407300
location: region:1-69407300:1
RO_0002162: 10041

NC_051072
type: RefSeq
SIO_000068: refseq

PRJNA533285
type: BioProject
SIO_000068: bioproject

SAMN03488028
type: BioSample
SIO_000068: biosample

1
title: The genome of Peromyscus leucopus, natural host for Lyme disease and other emerging infections
author: Long, A.D.
author: Baldwin-Brown, J.
author: Tao, Y.
author: Cook, V.J.
author: Balderrama-Gutierrez, G.
author: Corbett-Detig, R.
author: Mortazavi, A.
author: Barbour, A.G.
journal: Sci Adv 5 (7), eaaw6441 (2019)
pubmed: 31355335
comments: Publication Status: Online-Only

31355335
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69407300:1
position: 69407300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-69407300:1:source
so part of: sequence
organism: Peromyscus leucopus
mol type: genomic DNA
chromosome: 11
sex: female
tissue type: mixed organs
dev stage: adult
breed: LL Stock

10041
type: Taxonomy
SIO_000068: taxonomy

LOC114685538
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11619..45993)
location: region:11619-45993:-1
so has part: feature:11619-45993:-1:exon
subclass of: SO_0000010

114685538
type: Gene
SIO_000068: ncbigene

position:11619:-1
position: 11619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45993:-1
position: 45993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11619-45993:-1:exon

LOC114685538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685538
product: zinc finger protein 58-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_037209359.1
SIO_010081: LOC114685538
subclass of: SO_0000673
so part of: LOC114685538
location: complement(join(11619..13294,15629..15724,23358..23484,29485..29590,29860..29995,45905..45993))
location: region:11619-45993:-1
so has part: feature:45905-45993:-1:exon
so has part: feature:29860-29995:-1:exon
so has part: feature:29485-29590:-1:exon
so has part: feature:23358-23484:-1:exon
so has part: feature:15629-15724:-1:exon
so has part: feature:11619-13294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45905-45993:-1:exon

position:45905:-1
position: 45905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29860-29995:-1:exon

position:29860:-1
position: 29860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29995:-1
position: 29995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29485-29590:-1:exon

position:29485:-1
position: 29485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29590:-1
position: 29590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:23358-23484:-1:exon

position:23358:-1
position: 23358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23484:-1
position: 23484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15629-15724:-1:exon

position:15629:-1
position: 15629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15724:-1
position: 15724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11619-13294:-1:exon

position:13294:-1
position: 13294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114685538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685538
product: zinc finger protein 58-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_037209358.1
SIO_010081: LOC114685538
subclass of: SO_0000673
so part of: LOC114685538
location: complement(join(11619..13294,15629..15724,23358..23484,29443..29590,29860..29995,45905..45993))
location: region:11619-45993:-1
so has part: feature:45905-45993:-1:exon
so has part: feature:29860-29995:-1:exon
so has part: feature:29443-29590:-1:exon
so has part: feature:23358-23484:-1:exon
so has part: feature:15629-15724:-1:exon
so has part: feature:11619-13294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45905-45993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29860-29995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29443-29590:-1:exon

position:29443:-1
position: 29443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:23358-23484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15629-15724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11619-13294:-1:exon

LOC114685538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685538
product: zinc finger protein 58-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_037209360.1
SIO_010081: LOC114685538
subclass of: SO_0000673
so part of: LOC114685538
location: complement(join(11619..13294,15629..15724,23358..23484,29443..29590,45905..45990))
location: region:11619-45990:-1
so has part: feature:45905-45990:-1:exon
so has part: feature:29443-29590:-1:exon
so has part: feature:23358-23484:-1:exon
so has part: feature:15629-15724:-1:exon
so has part: feature:11619-13294:-1:exon

position:45990:-1
position: 45990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45905-45990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29443-29590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23358-23484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15629-15724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11619-13294:-1:exon

LOC114685538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685538
product: zinc finger protein 58-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_028860174.2
SIO_010081: LOC114685538
subclass of: SO_0000673
so part of: LOC114685538
location: complement(join(11619..13294,15629..15724,23358..23484,29372..29453))
location: region:11619-29453:-1
so has part: feature:29372-29453:-1:exon
so has part: feature:23358-23484:-1:exon
so has part: feature:15629-15724:-1:exon
so has part: feature:11619-13294:-1:exon

position:29453:-1
position: 29453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29372-29453:-1:exon

position:29372:-1
position: 29372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23358-23484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15629-15724:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619-13294:-1:exon

LOC114685538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X1
translation: MEEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSHLVFLGLAVSKPHLVTLLEQRQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNSLSIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGEKFYTCKECHKTFNTGSALFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPYKCEECGKAFYESSMLKQHQRIHSGEKPYNCMECDKSFNNPSVLKEHQKIHSGKKPYKCDECGKSFYKPSVLKRHQRIHSGEKPFKCEECGKSFYTPSVLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAILQKHSKIHEERPYKCEECHKTFLYHSSLKNHMVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTVHSEDNPYTCVQCGKRYSCSRDLQEHQTLHTGQILYKCEECGKEFHYLSGFRRHKAIHTGEKLYKCEECHKSFRYLSSLRNHVGVHTGEKPYKCEECNKTFCYLSYLRKHKRVHSEEKPYKCEECHKAFFISHPLGNTREFIVKRNPTSVKNVTKPFIISHPL
SIO_010081: LOC114685538
subclass of: SO_0000673
so part of: LOC114685538
location: complement(join(11724..13294,15629..15724,23358..23484,29372..29377))
location: region:11724-29377:-1
so has part: feature:29372-29377:-1:exon
so has part: feature:23358-23484:-1:exon
so has part: feature:15629-15724:-1:exon
so has part: feature:11724-13294:-1:exon

XP_028716007.1
type: Protein
SIO_000068: ncbiprotein

position:11724:-1
position: 11724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29377:-1
position: 29377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29372-29377:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23358-23484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15629-15724:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11724-13294:-1:exon

LOC114685538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X2
translation: MLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSHLVFLGLAVSKPHLVTLLEQRQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNSLSIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGEKFYTCKECHKTFNTGSALFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPYKCEECGKAFYESSMLKQHQRIHSGEKPYNCMECDKSFNNPSVLKEHQKIHSGKKPYKCDECGKSFYKPSVLKRHQRIHSGEKPFKCEECGKSFYTPSVLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAILQKHSKIHEERPYKCEECHKTFLYHSSLKNHMVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTVHSEDNPYTCVQCGKRYSCSRDLQEHQTLHTGQILYKCEECGKEFHYLSGFRRHKAIHTGEKLYKCEECHKSFRYLSSLRNHVGVHTGEKPYKCEECNKTFCYLSYLRKHKRVHSEEKPYKCEECHKAFFISHPLGNTREFIVKRNPTSVKNVTKPFIISHPL
SIO_010081: LOC114685538
subclass of: SO_0000673
so part of: LOC114685538
location: complement(join(11724..13294,15629..15724,23358..23481))
location: region:11724-23481:-1
so has part: feature:23358-23481:-1:exon
so has part: feature:15629-15724:-1:exon
so has part: feature:11724-13294:-1:exon

XP_037065253.1
type: Protein
SIO_000068: ncbiprotein

position:23481:-1
position: 23481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23358-23481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15629-15724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11724-13294:-1:exon

LOC114685538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X2
translation: MLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSHLVFLGLAVSKPHLVTLLEQRQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNSLSIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGEKFYTCKECHKTFNTGSALFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPYKCEECGKAFYESSMLKQHQRIHSGEKPYNCMECDKSFNNPSVLKEHQKIHSGKKPYKCDECGKSFYKPSVLKRHQRIHSGEKPFKCEECGKSFYTPSVLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAILQKHSKIHEERPYKCEECHKTFLYHSSLKNHMVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTVHSEDNPYTCVQCGKRYSCSRDLQEHQTLHTGQILYKCEECGKEFHYLSGFRRHKAIHTGEKLYKCEECHKSFRYLSSLRNHVGVHTGEKPYKCEECNKTFCYLSYLRKHKRVHSEEKPYKCEECHKAFFISHPLGNTREFIVKRNPTSVKNVTKPFIISHPL
SIO_010081: LOC114685538
subclass of: SO_0000673
so part of: LOC114685538
location: complement(join(11724..13294,15629..15724,23358..23481))
location: region:11724-23481:-1
so has part: feature:23358-23481:-1:exon
so has part: feature:15629-15724:-1:exon
so has part: feature:11724-13294:-1:exon

XP_037065254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23358-23481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15629-15724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11724-13294:-1:exon

LOC114685538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X2
translation: MLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSHLVFLGLAVSKPHLVTLLEQRQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNSLSIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGEKFYTCKECHKTFNTGSALFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPYKCEECGKAFYESSMLKQHQRIHSGEKPYNCMECDKSFNNPSVLKEHQKIHSGKKPYKCDECGKSFYKPSVLKRHQRIHSGEKPFKCEECGKSFYTPSVLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAILQKHSKIHEERPYKCEECHKTFLYHSSLKNHMVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTVHSEDNPYTCVQCGKRYSCSRDLQEHQTLHTGQILYKCEECGKEFHYLSGFRRHKAIHTGEKLYKCEECHKSFRYLSSLRNHVGVHTGEKPYKCEECNKTFCYLSYLRKHKRVHSEEKPYKCEECHKAFFISHPLGNTREFIVKRNPTSVKNVTKPFIISHPL
SIO_010081: LOC114685538
subclass of: SO_0000673
so part of: LOC114685538
location: complement(join(11724..13294,15629..15724,23358..23481))
location: region:11724-23481:-1
so has part: feature:23358-23481:-1:exon
so has part: feature:15629-15724:-1:exon
so has part: feature:11724-13294:-1:exon

XP_037065255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23358-23481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15629-15724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11724-13294:-1:exon

LOC114685539
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(39428..49990)
location: region:39428-49990:-1
so has part: feature:39428-49990:-1:exon
subclass of: SO_0000010

114685539
type: Gene
SIO_000068: ncbigene

position:39428:-1
position: 39428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49990:-1
position: 49990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39428-49990:-1:exon

LOC114685539
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685539
product: zinc finger protein 58-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_037209357.1
SIO_010081: LOC114685539
subclass of: SO_0000673
so part of: LOC114685539
location: complement(join(39428..42890,45905..46000,47439..47565,49820..49990))
location: region:39428-49990:-1
so has part: feature:49820-49990:-1:exon
so has part: feature:47439-47565:-1:exon
so has part: feature:45905-46000:-1:exon
so has part: feature:39428-42890:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49820-49990:-1:exon

position:49820:-1
position: 49820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:47439-47565:-1:exon

position:47439:-1
position: 47439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47565:-1
position: 47565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:45905-46000:-1:exon

position:46000:-1
position: 46000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:39428-42890:-1:exon

position:42890:-1
position: 42890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114685539
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like
translation: MILPCPYGVRQLHASDKNAPCPVFDQHFSFLPPPDNCAPVPARSSSRRKHIVHVPSSEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSHLVFLGLAVSKPHLVTLLEQRQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNSLSTQCQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTREKIYTCKKCHKTFNTRSSLFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPYKCEGCGRAFCYTSFLKHGQRILSVEKVYKCEECGKAFCYPSLLKQHQRIHSGEKPYKCEECGKSFYNSSLLKQHQRIHSGEKPYKCEECGKSFYNSSLLKQHQRIHSVEKPCKCEECGSFFSSFSYLRQHQRIHSKDNPYKCEACGKRFSHSAILQKHSKIHGERPYKCEECHKTFLYHSSLKNHKIVHSGQKPYKCEECGKCFSAASCLRRHQIIHCEDNPYKCEECGRCFSSDSCLKGHQIIHSEENPYTCVQCGKRYSRSRDLKEHQTLHTGEKLYKCEECGKDFHYHSALRRHKTIHIGEKPYKCEECHKAFRCLSYLKKHRSIHTQEKPYKCEECLKAFHFFSSLIKHKRVHSKEKSYKCE
SIO_010081: LOC114685539
subclass of: SO_0000673
so part of: LOC114685539
location: complement(join(41440..42890,45905..46000,47439..47565,49820..49990))
location: region:41440-49990:-1
so has part: feature:49820-49990:-1:exon
so has part: feature:47439-47565:-1:exon
so has part: feature:45905-46000:-1:exon
so has part: feature:41440-42890:-1:exon

XP_037065252.1
type: Protein
SIO_000068: ncbiprotein

position:41440:-1
position: 41440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49820-49990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47439-47565:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45905-46000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41440-42890:-1:exon

LOC119088701
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119088701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(50273..51726)
location: region:50273-51726:-1
so has part: feature:50273-51726:-1:exon
subclass of: SO_0000011

119088701
type: Gene
SIO_000068: ncbigene

position:50273:-1
position: 50273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51726:-1
position: 51726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50273-51726:-1:exon

LOC119088701
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119088701
product: uncharacterized LOC119088701
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005092396.1
SIO_010081: LOC119088701
subclass of: SO_0000673
so part of: LOC119088701
location: complement(join(50273..50306,50928..51188,51558..51726))
location: region:50273-51726:-1
so has part: feature:51558-51726:-1:exon
so has part: feature:50928-51188:-1:exon
so has part: feature:50273-50306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51558-51726:-1:exon

position:51558:-1
position: 51558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50928-51188:-1:exon

position:50928:-1
position: 50928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51188:-1
position: 51188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:50273-50306:-1:exon

position:50306:-1
position: 50306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114685531
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(64353..191586)
location: region:64353-191586:-1
so has part: feature:64353-191586:-1:exon
subclass of: SO_0000010

114685531
type: Gene
SIO_000068: ncbigene

position:64353:-1
position: 64353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191586:-1
position: 191586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64353-191586:-1:exon

LOC114685531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685531
product: zinc finger protein 58-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037209347.1
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(64353..67182,99600..99695,107307..107433,191451..191585))
location: region:64353-191585:-1
so has part: feature:191451-191585:-1:exon
so has part: feature:107307-107433:-1:exon
so has part: feature:99600-99695:-1:exon
so has part: feature:64353-67182:-1:exon

position:191585:-1
position: 191585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191451-191585:-1:exon

position:191451:-1
position: 191451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107307-107433:-1:exon

position:107307:-1
position: 107307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107433:-1
position: 107433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99600-99695:-1:exon

position:99600:-1
position: 99600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99695:-1
position: 99695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:64353-67182:-1:exon

position:67182:-1
position: 67182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114685531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685531
product: zinc finger protein 58-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037209350.1
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(64353..67182,99600..99695,107307..107433,107802..107953,109525..109604))
location: region:64353-109604:-1
so has part: feature:109525-109604:-1:exon
so has part: feature:107802-107953:-1:exon
so has part: feature:107307-107433:-1:exon
so has part: feature:99600-99695:-1:exon
so has part: feature:64353-67182:-1:exon

position:109604:-1
position: 109604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109525-109604:-1:exon

position:109525:-1
position: 109525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107802-107953:-1:exon

position:107802:-1
position: 107802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107953:-1
position: 107953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107307-107433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99600-99695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64353-67182:-1:exon

LOC114685531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685531
product: zinc finger protein 58-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037209351.1
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(64353..67182,99600..99695,107307..107433,107802..107953,108216..108256,109412..109495))
location: region:64353-109495:-1
so has part: feature:109412-109495:-1:exon
so has part: feature:108216-108256:-1:exon
so has part: feature:107802-107953:-1:exon
so has part: feature:107307-107433:-1:exon
so has part: feature:99600-99695:-1:exon
so has part: feature:64353-67182:-1:exon

position:109495:-1
position: 109495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109412-109495:-1:exon

position:109412:-1
position: 109412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108216-108256:-1:exon

position:108216:-1
position: 108216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108256:-1
position: 108256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107802-107953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107307-107433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99600-99695:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64353-67182:-1:exon

LOC114685531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685531
product: zinc finger protein 58-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_037209349.1
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(64353..67182,99600..99695,107307..107433,107802..107953,109412..109488))
location: region:64353-109488:-1
so has part: feature:109412-109488:-1:exon
so has part: feature:107802-107953:-1:exon
so has part: feature:107307-107433:-1:exon
so has part: feature:99600-99695:-1:exon
so has part: feature:64353-67182:-1:exon

position:109488:-1
position: 109488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109412-109488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107802-107953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107307-107433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99600-99695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64353-67182:-1:exon

LOC114685531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685531
product: zinc finger protein 58-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_037209352.1
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(64353..67182,69533..69628,78033..78159,107802..107953,109265..109485))
location: region:64353-109485:-1
so has part: feature:109265-109485:-1:exon
so has part: feature:107802-107953:-1:exon
so has part: feature:78033-78159:-1:exon
so has part: feature:69533-69628:-1:exon
so has part: feature:64353-67182:-1:exon

position:109485:-1
position: 109485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109265-109485:-1:exon

position:109265:-1
position: 109265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107802-107953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78033-78159:-1:exon

position:78033:-1
position: 78033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78159:-1
position: 78159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:69533-69628:-1:exon

position:69533:-1
position: 69533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69628:-1
position: 69628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:64353-67182:-1:exon

LOC114685531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685531
product: zinc finger protein 58-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_037209348.1
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(64353..67182,99600..99695,107307..107433,107802..107953,109265..109485))
location: region:64353-109485:-1
so has part: feature:109265-109485:-1:exon
so has part: feature:107802-107953:-1:exon
so has part: feature:107307-107433:-1:exon
so has part: feature:99600-99695:-1:exon
so has part: feature:64353-67182:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109265-109485:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107802-107953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107307-107433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99600-99695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64353-67182:-1:exon

LOC114685531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685531
product: zinc finger protein 58-like, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_037209355.1
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(64353..67182,99600..99695,107307..107433,109412..109475))
location: region:64353-109475:-1
so has part: feature:109412-109475:-1:exon
so has part: feature:107307-107433:-1:exon
so has part: feature:99600-99695:-1:exon
so has part: feature:64353-67182:-1:exon

position:109475:-1
position: 109475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109412-109475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107307-107433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99600-99695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64353-67182:-1:exon

LOC114685531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685531
product: zinc finger protein 58-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_037209346.1
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(64353..67182,69533..69628,78033..78159,80156..80373,82869..83033,85057..85271,99600..99687))
location: region:64353-99687:-1
so has part: feature:99600-99687:-1:exon
so has part: feature:85057-85271:-1:exon
so has part: feature:82869-83033:-1:exon
so has part: feature:80156-80373:-1:exon
so has part: feature:78033-78159:-1:exon
so has part: feature:69533-69628:-1:exon
so has part: feature:64353-67182:-1:exon

position:99687:-1
position: 99687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99600-99687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85057-85271:-1:exon

position:85057:-1
position: 85057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85271:-1
position: 85271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:82869-83033:-1:exon

position:82869:-1
position: 82869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83033:-1
position: 83033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:80156-80373:-1:exon

position:80156:-1
position: 80156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80373:-1
position: 80373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:78033-78159:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69533-69628:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64353-67182:-1:exon

LOC114685531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685531
product: zinc finger protein 58-like, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_028860164.2
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(64353..67182,69533..69628,78033..78159,99600..99679))
location: region:64353-99679:-1
so has part: feature:99600-99679:-1:exon
so has part: feature:78033-78159:-1:exon
so has part: feature:69533-69628:-1:exon
so has part: feature:64353-67182:-1:exon

position:99679:-1
position: 99679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99600-99679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78033-78159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69533-69628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64353-67182:-1:exon

LOC114685531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685531
product: zinc finger protein 58-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_028860161.2
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(64353..67182,69533..69628,78033..78159,80156..80373,82869..83033,83139..83298))
location: region:64353-83298:-1
so has part: feature:83139-83298:-1:exon
so has part: feature:82869-83033:-1:exon
so has part: feature:80156-80373:-1:exon
so has part: feature:78033-78159:-1:exon
so has part: feature:69533-69628:-1:exon
so has part: feature:64353-67182:-1:exon

position:83298:-1
position: 83298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83139-83298:-1:exon

position:83139:-1
position: 83139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:82869-83033:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80156-80373:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78033-78159:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69533-69628:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64353-67182:-1:exon

LOC114685531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685531
product: zinc finger protein 58-like, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_037209353.1
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(64353..67182,69533..69628,78033..78159,78527..78979,80156..80242))
location: region:64353-80242:-1
so has part: feature:80156-80242:-1:exon
so has part: feature:78527-78979:-1:exon
so has part: feature:78033-78159:-1:exon
so has part: feature:69533-69628:-1:exon
so has part: feature:64353-67182:-1:exon

position:80242:-1
position: 80242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80156-80242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78527-78979:-1:exon

position:78527:-1
position: 78527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78979:-1
position: 78979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:78033-78159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69533-69628:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64353-67182:-1:exon

LOC114685531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685531
product: zinc finger protein 58-like, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037209354.1
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(64353..67182,69533..69628,78033..78159,78527..78678,80156..80229))
location: region:64353-80229:-1
so has part: feature:80156-80229:-1:exon
so has part: feature:78527-78678:-1:exon
so has part: feature:78033-78159:-1:exon
so has part: feature:69533-69628:-1:exon
so has part: feature:64353-67182:-1:exon

position:80229:-1
position: 80229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80156-80229:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78527-78678:-1:exon

position:78678:-1
position: 78678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:78033-78159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69533-69628:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64353-67182:-1:exon

LOC114685531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685531
product: zinc finger protein 58-like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_028860163.2
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(64353..67182,69533..69628,78033..78159,78527..80149))
location: region:64353-80149:-1
so has part: feature:78527-80149:-1:exon
so has part: feature:78033-78159:-1:exon
so has part: feature:69533-69628:-1:exon
so has part: feature:64353-67182:-1:exon

position:80149:-1
position: 80149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78527-80149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78033-78159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69533-69628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64353-67182:-1:exon

LOC114685531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X2
translation: MWHCDITGSHPGNPNQAFCRHTCFFFKVWLEFCPTLHSCCVSDMEEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSNLVFLGLAVSKPHLVTLLEQRQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNLLRIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGDKPYMCKECHKTFNTRSSLFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQKIHSGEKPNKCEKCDKAFYDPSMLKQHQRIHSGEKPYNCKECDKSFNTPSVLKQHQKIHSGKKPYKCEECGKYFYKPSVLKQHQRIHSGEKPCKCEECGKSFYKPSLLKQHQRIHSGVKPCKCEECGKSFYYPSLLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAIFQKHSKIHEDRPYKCEECHKTFLYHSSLKNHKVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTIHSEDNPYTCVQCGKRYSCSRNLQEHQTLHTGEKLYKCEECGKGFHYLSCFRNHKAIHTGEKLYKCEECHKTFRYLSSLRNHMGVHTGEKPFKCGECNKTFCYLSYLRKHKRVHSEEKSYKCEECHKAFHYLSSLRKHKRVHSEEKPYKCEECHKAFFYLSSLMRHKTVHTGENP
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(65324..67182,99600..99695,107307..107433,191451..191585))
location: region:65324-191585:-1
so has part: feature:191451-191585:-1:exon
so has part: feature:107307-107433:-1:exon
so has part: feature:99600-99695:-1:exon
so has part: feature:65324-67182:-1:exon

XP_037065242.1
type: Protein
SIO_000068: ncbiprotein

position:65324:-1
position: 65324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191451-191585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107307-107433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99600-99695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65324-67182:-1:exon

LOC114685531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X6
translation: MEEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSNLVFLGLAVSKPHLVTLLEQRQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNLLRIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGDKPYMCKECHKTFNTRSSLFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQKIHSGEKPNKCEKCDKAFYDPSMLKQHQRIHSGEKPYNCKECDKSFNTPSVLKQHQKIHSGKKPYKCEECGKYFYKPSVLKQHQRIHSGEKPCKCEECGKSFYKPSLLKQHQRIHSGVKPCKCEECGKSFYYPSLLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAIFQKHSKIHEDRPYKCEECHKTFLYHSSLKNHKVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTIHSEDNPYTCVQCGKRYSCSRNLQEHQTLHTGEKLYKCEECGKGFHYLSCFRNHKAIHTGEKLYKCEECHKTFRYLSSLRNHMGVHTGEKPFKCGECNKTFCYLSYLRKHKRVHSEEKSYKCEECHKAFHYLSSLRKHKRVHSEEKPYKCEECHKAFFYLSSLMRHKTVHTGENP
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(65324..67182,99600..99695,107307..107433,109412..109417))
location: region:65324-109417:-1
so has part: feature:109412-109417:-1:exon
so has part: feature:107307-107433:-1:exon
so has part: feature:99600-99695:-1:exon
so has part: feature:65324-67182:-1:exon

XP_037065250.1
type: Protein
SIO_000068: ncbiprotein

position:109417:-1
position: 109417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109412-109417:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107307-107433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99600-99695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65324-67182:-1:exon

LOC114685531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X4
translation: MPSPDLTPEVPEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSNLDFLGLAESKPHLVTLLEQIQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNLLRIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGDKPYMCKECHKTFNTRSSLFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQKIHSGEKPNKCEKCDKAFYDPSMLKQHQRIHSGEKPYNCKECDKSFNTPSVLKQHQKIHSGKKPYKCEECGKYFYKPSVLKQHQRIHSGEKPCKCEECGKSFYKPSLLKQHQRIHSGVKPCKCEECGKSFYYPSLLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAIFQKHSKIHEDRPYKCEECHKTFLYHSSLKNHKVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTIHSEDNPYTCVQCGKRYSCSRNLQEHQTLHTGEKLYKCEECGKGFHYLSCFRNHKAIHTGEKLYKCEECHKTFRYLSSLRNHMGVHTGEKPFKCGECNKTFCYLSYLRKHKRVHSEEKSYKCEECHKAFHYLSSLRKHKRVHSEEKPYKCEECHKAFFYLSSLMRHKTVHTGENP
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(65324..67182,69533..69628,78033..78159,107802..107834))
location: region:65324-107834:-1
so has part: feature:107802-107834:-1:exon
so has part: feature:78033-78159:-1:exon
so has part: feature:69533-69628:-1:exon
so has part: feature:65324-67182:-1:exon

XP_037065247.1
type: Protein
SIO_000068: ncbiprotein

position:107834:-1
position: 107834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107802-107834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78033-78159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69533-69628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65324-67182:-1:exon

LOC114685531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X3
translation: MPSPDLTPEVPEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSNLVFLGLAVSKPHLVTLLEQRQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNLLRIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGDKPYMCKECHKTFNTRSSLFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQKIHSGEKPNKCEKCDKAFYDPSMLKQHQRIHSGEKPYNCKECDKSFNTPSVLKQHQKIHSGKKPYKCEECGKYFYKPSVLKQHQRIHSGEKPCKCEECGKSFYKPSLLKQHQRIHSGVKPCKCEECGKSFYYPSLLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAIFQKHSKIHEDRPYKCEECHKTFLYHSSLKNHKVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTIHSEDNPYTCVQCGKRYSCSRNLQEHQTLHTGEKLYKCEECGKGFHYLSCFRNHKAIHTGEKLYKCEECHKTFRYLSSLRNHMGVHTGEKPFKCGECNKTFCYLSYLRKHKRVHSEEKSYKCEECHKAFHYLSSLRKHKRVHSEEKPYKCEECHKAFFYLSSLMRHKTVHTGENP
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(65324..67182,99600..99695,107307..107433,107802..107834))
location: region:65324-107834:-1
so has part: feature:107802-107834:-1:exon
so has part: feature:107307-107433:-1:exon
so has part: feature:99600-99695:-1:exon
so has part: feature:65324-67182:-1:exon

XP_037065243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107802-107834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107307-107433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99600-99695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65324-67182:-1:exon

LOC114685531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X3
translation: MPSPDLTPEVPEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSNLVFLGLAVSKPHLVTLLEQRQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNLLRIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGDKPYMCKECHKTFNTRSSLFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQKIHSGEKPNKCEKCDKAFYDPSMLKQHQRIHSGEKPYNCKECDKSFNTPSVLKQHQKIHSGKKPYKCEECGKYFYKPSVLKQHQRIHSGEKPCKCEECGKSFYKPSLLKQHQRIHSGVKPCKCEECGKSFYYPSLLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAIFQKHSKIHEDRPYKCEECHKTFLYHSSLKNHKVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTIHSEDNPYTCVQCGKRYSCSRNLQEHQTLHTGEKLYKCEECGKGFHYLSCFRNHKAIHTGEKLYKCEECHKTFRYLSSLRNHMGVHTGEKPFKCGECNKTFCYLSYLRKHKRVHSEEKSYKCEECHKAFHYLSSLRKHKRVHSEEKPYKCEECHKAFFYLSSLMRHKTVHTGENP
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(65324..67182,99600..99695,107307..107433,107802..107834))
location: region:65324-107834:-1
so has part: feature:107802-107834:-1:exon
so has part: feature:107307-107433:-1:exon
so has part: feature:99600-99695:-1:exon
so has part: feature:65324-67182:-1:exon

XP_037065244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107802-107834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107307-107433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99600-99695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65324-67182:-1:exon

LOC114685531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X3
translation: MPSPDLTPEVPEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSNLVFLGLAVSKPHLVTLLEQRQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNLLRIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGDKPYMCKECHKTFNTRSSLFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQKIHSGEKPNKCEKCDKAFYDPSMLKQHQRIHSGEKPYNCKECDKSFNTPSVLKQHQKIHSGKKPYKCEECGKYFYKPSVLKQHQRIHSGEKPCKCEECGKSFYKPSLLKQHQRIHSGVKPCKCEECGKSFYYPSLLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAIFQKHSKIHEDRPYKCEECHKTFLYHSSLKNHKVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTIHSEDNPYTCVQCGKRYSCSRNLQEHQTLHTGEKLYKCEECGKGFHYLSCFRNHKAIHTGEKLYKCEECHKTFRYLSSLRNHMGVHTGEKPFKCGECNKTFCYLSYLRKHKRVHSEEKSYKCEECHKAFHYLSSLRKHKRVHSEEKPYKCEECHKAFFYLSSLMRHKTVHTGENP
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(65324..67182,99600..99695,107307..107433,107802..107834))
location: region:65324-107834:-1
so has part: feature:107802-107834:-1:exon
so has part: feature:107307-107433:-1:exon
so has part: feature:99600-99695:-1:exon
so has part: feature:65324-67182:-1:exon

XP_037065245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107802-107834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107307-107433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99600-99695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65324-67182:-1:exon

LOC114685531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X3
translation: MPSPDLTPEVPEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSNLVFLGLAVSKPHLVTLLEQRQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNLLRIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGDKPYMCKECHKTFNTRSSLFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQKIHSGEKPNKCEKCDKAFYDPSMLKQHQRIHSGEKPYNCKECDKSFNTPSVLKQHQKIHSGKKPYKCEECGKYFYKPSVLKQHQRIHSGEKPCKCEECGKSFYKPSLLKQHQRIHSGVKPCKCEECGKSFYYPSLLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAIFQKHSKIHEDRPYKCEECHKTFLYHSSLKNHKVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTIHSEDNPYTCVQCGKRYSCSRNLQEHQTLHTGEKLYKCEECGKGFHYLSCFRNHKAIHTGEKLYKCEECHKTFRYLSSLRNHMGVHTGEKPFKCGECNKTFCYLSYLRKHKRVHSEEKSYKCEECHKAFHYLSSLRKHKRVHSEEKPYKCEECHKAFFYLSSLMRHKTVHTGENP
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(65324..67182,99600..99695,107307..107433,107802..107834))
location: region:65324-107834:-1
so has part: feature:107802-107834:-1:exon
so has part: feature:107307-107433:-1:exon
so has part: feature:99600-99695:-1:exon
so has part: feature:65324-67182:-1:exon

XP_037065246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107802-107834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107307-107433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99600-99695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65324-67182:-1:exon

LOC114685531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X1
translation: MDKGSQTGIHNRRKGHTWDPTILSHRLLGNVVCGTVTSRRAIRNSLLAFSPRVCNFLKVGRESCPALHSCCISYMEEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSNLDFLGLAESKPHLVTLLEQIQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNLLRIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGDKPYMCKECHKTFNTRSSLFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQKIHSGEKPNKCEKCDKAFYDPSMLKQHQRIHSGEKPYNCKECDKSFNTPSVLKQHQKIHSGKKPYKCEECGKYFYKPSVLKQHQRIHSGEKPCKCEECGKSFYKPSLLKQHQRIHSGVKPCKCEECGKSFYYPSLLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAIFQKHSKIHEDRPYKCEECHKTFLYHSSLKNHKVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTIHSEDNPYTCVQCGKRYSCSRNLQEHQTLHTGEKLYKCEECGKGFHYLSCFRNHKAIHTGEKLYKCEECHKTFRYLSSLRNHMGVHTGEKPFKCGECNKTFCYLSYLRKHKRVHSEEKSYKCEECHKAFHYLSSLRKHKRVHSEEKPYKCEECHKAFFYLSSLMRHKTVHTGENP
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(65324..67182,69533..69628,78033..78159,80156..80373,82869..82878))
location: region:65324-82878:-1
so has part: feature:82869-82878:-1:exon
so has part: feature:80156-80373:-1:exon
so has part: feature:78033-78159:-1:exon
so has part: feature:69533-69628:-1:exon
so has part: feature:65324-67182:-1:exon

XP_028715994.1
type: Protein
SIO_000068: ncbiprotein

position:82878:-1
position: 82878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82869-82878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80156-80373:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78033-78159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69533-69628:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:65324-67182:-1:exon

LOC114685531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X1
translation: MDKGSQTGIHNRRKGHTWDPTILSHRLLGNVVCGTVTSRRAIRNSLLAFSPRVCNFLKVGRESCPALHSCCISYMEEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSNLDFLGLAESKPHLVTLLEQIQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNLLRIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGDKPYMCKECHKTFNTRSSLFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQKIHSGEKPNKCEKCDKAFYDPSMLKQHQRIHSGEKPYNCKECDKSFNTPSVLKQHQKIHSGKKPYKCEECGKYFYKPSVLKQHQRIHSGEKPCKCEECGKSFYKPSLLKQHQRIHSGVKPCKCEECGKSFYYPSLLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAIFQKHSKIHEDRPYKCEECHKTFLYHSSLKNHKVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTIHSEDNPYTCVQCGKRYSCSRNLQEHQTLHTGEKLYKCEECGKGFHYLSCFRNHKAIHTGEKLYKCEECHKTFRYLSSLRNHMGVHTGEKPFKCGECNKTFCYLSYLRKHKRVHSEEKSYKCEECHKAFHYLSSLRKHKRVHSEEKPYKCEECHKAFFYLSSLMRHKTVHTGENP
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(65324..67182,69533..69628,78033..78159,80156..80373,82869..82878))
location: region:65324-82878:-1
so has part: feature:82869-82878:-1:exon
so has part: feature:80156-80373:-1:exon
so has part: feature:78033-78159:-1:exon
so has part: feature:69533-69628:-1:exon
so has part: feature:65324-67182:-1:exon

XP_037065241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82869-82878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80156-80373:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78033-78159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69533-69628:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:65324-67182:-1:exon

LOC114685531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X5
translation: MPSPVLTPEVPEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSNLDFLGLAESKPHLVTLLEQIQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNLLRIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGDKPYMCKECHKTFNTRSSLFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQKIHSGEKPNKCEKCDKAFYDPSMLKQHQRIHSGEKPYNCKECDKSFNTPSVLKQHQKIHSGKKPYKCEECGKYFYKPSVLKQHQRIHSGEKPCKCEECGKSFYKPSLLKQHQRIHSGVKPCKCEECGKSFYYPSLLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAIFQKHSKIHEDRPYKCEECHKTFLYHSSLKNHKVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTIHSEDNPYTCVQCGKRYSCSRNLQEHQTLHTGEKLYKCEECGKGFHYLSCFRNHKAIHTGEKLYKCEECHKTFRYLSSLRNHMGVHTGEKPFKCGECNKTFCYLSYLRKHKRVHSEEKSYKCEECHKAFHYLSSLRKHKRVHSEEKPYKCEECHKAFFYLSSLMRHKTVHTGENP
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(65324..67182,69533..69628,78033..78159,78527..78559))
location: region:65324-78559:-1
so has part: feature:78527-78559:-1:exon
so has part: feature:78033-78159:-1:exon
so has part: feature:69533-69628:-1:exon
so has part: feature:65324-67182:-1:exon

XP_028715996.1
type: Protein
SIO_000068: ncbiprotein

position:78559:-1
position: 78559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78527-78559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78033-78159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69533-69628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65324-67182:-1:exon

LOC114685531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X5
translation: MPSPVLTPEVPEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSNLDFLGLAESKPHLVTLLEQIQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNLLRIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGDKPYMCKECHKTFNTRSSLFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQKIHSGEKPNKCEKCDKAFYDPSMLKQHQRIHSGEKPYNCKECDKSFNTPSVLKQHQKIHSGKKPYKCEECGKYFYKPSVLKQHQRIHSGEKPCKCEECGKSFYKPSLLKQHQRIHSGVKPCKCEECGKSFYYPSLLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAIFQKHSKIHEDRPYKCEECHKTFLYHSSLKNHKVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTIHSEDNPYTCVQCGKRYSCSRNLQEHQTLHTGEKLYKCEECGKGFHYLSCFRNHKAIHTGEKLYKCEECHKTFRYLSSLRNHMGVHTGEKPFKCGECNKTFCYLSYLRKHKRVHSEEKSYKCEECHKAFHYLSSLRKHKRVHSEEKPYKCEECHKAFFYLSSLMRHKTVHTGENP
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(65324..67182,69533..69628,78033..78159,78527..78559))
location: region:65324-78559:-1
so has part: feature:78527-78559:-1:exon
so has part: feature:78033-78159:-1:exon
so has part: feature:69533-69628:-1:exon
so has part: feature:65324-67182:-1:exon

XP_037065248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78527-78559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78033-78159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69533-69628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65324-67182:-1:exon

LOC114685531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X5
translation: MPSPVLTPEVPEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSNLDFLGLAESKPHLVTLLEQIQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNLLRIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGDKPYMCKECHKTFNTRSSLFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQKIHSGEKPNKCEKCDKAFYDPSMLKQHQRIHSGEKPYNCKECDKSFNTPSVLKQHQKIHSGKKPYKCEECGKYFYKPSVLKQHQRIHSGEKPCKCEECGKSFYKPSLLKQHQRIHSGVKPCKCEECGKSFYYPSLLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAIFQKHSKIHEDRPYKCEECHKTFLYHSSLKNHKVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTIHSEDNPYTCVQCGKRYSCSRNLQEHQTLHTGEKLYKCEECGKGFHYLSCFRNHKAIHTGEKLYKCEECHKTFRYLSSLRNHMGVHTGEKPFKCGECNKTFCYLSYLRKHKRVHSEEKSYKCEECHKAFHYLSSLRKHKRVHSEEKPYKCEECHKAFFYLSSLMRHKTVHTGENP
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(65324..67182,69533..69628,78033..78159,78527..78559))
location: region:65324-78559:-1
so has part: feature:78527-78559:-1:exon
so has part: feature:78033-78159:-1:exon
so has part: feature:69533-69628:-1:exon
so has part: feature:65324-67182:-1:exon

XP_037065249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78527-78559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78033-78159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69533-69628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65324-67182:-1:exon

LOC114685531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X7
translation: MLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSNLDFLGLAESKPHLVTLLEQIQDSSDVKRQAAANVQPGTTFNDYNDYSKGIDCNLLRIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGDKPYMCKECHKTFNTRSSLFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQKIHSGEKPNKCEKCDKAFYDPSMLKQHQRIHSGEKPYNCKECDKSFNTPSVLKQHQKIHSGKKPYKCEECGKYFYKPSVLKQHQRIHSGEKPCKCEECGKSFYKPSLLKQHQRIHSGVKPCKCEECGKSFYYPSLLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAIFQKHSKIHEDRPYKCEECHKTFLYHSSLKNHKVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTIHSEDNPYTCVQCGKRYSCSRNLQEHQTLHTGEKLYKCEECGKGFHYLSCFRNHKAIHTGEKLYKCEECHKTFRYLSSLRNHMGVHTGEKPFKCGECNKTFCYLSYLRKHKRVHSEEKSYKCEECHKAFHYLSSLRKHKRVHSEEKPYKCEECHKAFFYLSSLMRHKTVHTGENP
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(65324..67182,69533..69628,78033..78156))
location: region:65324-78156:-1
so has part: feature:78033-78156:-1:exon
so has part: feature:69533-69628:-1:exon
so has part: feature:65324-67182:-1:exon

XP_028715997.1
type: Protein
SIO_000068: ncbiprotein

position:78156:-1
position: 78156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78033-78156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69533-69628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:65324-67182:-1:exon

LOC114685531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685531
product: zinc finger protein 58-like, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_037209356.1
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(94628..97259,99600..99695,107307..107433,191451..191586))
location: region:94628-191586:-1
so has part: feature:191451-191586:-1:exon
so has part: feature:107307-107433:-1:exon
so has part: feature:99600-99695:-1:exon
so has part: feature:94628-97259:-1:exon

position:94628:-1
position: 94628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191451-191586:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107307-107433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99600-99695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94628-97259:-1:exon

position:97259:-1
position: 97259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114685531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X8
translation: MWHCDITGSHPGNPNQAFCRHTCFFFKVWLEFCPTLHSCCVSDMEEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSNLVFLGLAVSKPHLVTLLEQRQDSSDVKRQAAANVQPGTTLNDYNDYRKGIDYNLLRIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGEKFYTCKECHKTFNTGSALFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPYKCEECGKAFYESSMLKQHQRIHSGEKPYNCMECDKSFNNPSVLKEHQKIHSGKKPYKCDECGKSFYKPSVLKRHQRIHSGEKPFKCEECGKSFYTPSVLKQHQRIHSRKKPCLCEECGSLFSSFSSLTQHQTVHYKDNPYKCAECGIRFSHSAILQKHSKIHEERPYKCEECHKTFLYHSSLKNHMVVHTRQKLYKCEECGKYFSSASCLRRHQIIHSEDNPYKCEECGRCFSSDACFRAHQTVHSEDNPYTCVQCGKRYSCSRDLQEHQTLHTGQILYKCEECGKEFHYLSGFRRHKAIHTGEKLYKCEECHKSFRYLSSLRNHMGVHTGEKPYKCEECNKTFCYLSYLRKHKRVHSEEKPYKCEECHKAFFYLSSLRKHKRVHSEEKPYKCEECHKAFHYISSLMRHKTVHTGENP
SIO_010081: LOC114685531
subclass of: SO_0000673
so part of: LOC114685531
location: complement(join(95653..97259,99600..99695,107307..107433,191451..191585))
location: region:95653-191585:-1
so has part: feature:191451-191585:-1:exon
so has part: feature:107307-107433:-1:exon
so has part: feature:99600-99695:-1:exon
so has part: feature:95653-97259:-1:exon

XP_037065251.1
type: Protein
SIO_000068: ncbiprotein

position:95653:-1
position: 95653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191451-191585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107307-107433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99600-99695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95653-97259:-1:exon

LOC119088702
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119088702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 109626..131234
location: region:109626-131234:1
so has part: feature:109626-131234:1:exon
subclass of: SO_0000011

119088702
type: Gene
SIO_000068: ncbigene

position:109626:1
position: 109626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131234:1
position: 131234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109626-131234:1:exon

LOC119088702
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119088702
product: uncharacterized LOC119088702
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XR_005092397.1
SIO_010081: LOC119088702
subclass of: SO_0000673
so part of: LOC119088702
location: join(109626..109727,130351..131234)
location: region:109626-131234:1
so has part: feature:109626-109727:1:exon
so has part: feature:130351-131234:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109626-109727:1:exon

position:109727:1
position: 109727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:130351-131234:1:exon

position:130351:1
position: 130351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119088703
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119088703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 117016..120107
location: region:117016-120107:1
so has part: feature:117016-120107:1:exon
subclass of: SO_0000011

119088703
type: Gene
SIO_000068: ncbigene

position:117016:1
position: 117016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120107:1
position: 120107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117016-120107:1:exon

LOC119088703
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119088703
product: uncharacterized LOC119088703
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_005092398.1
SIO_010081: LOC119088703
subclass of: SO_0000673
so part of: LOC119088703
location: join(117016..118247,119910..120107)
location: region:117016-120107:1
so has part: feature:117016-118247:1:exon
so has part: feature:119910-120107:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117016-118247:1:exon

position:118247:1
position: 118247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119910-120107:1:exon

position:119910:1
position: 119910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114685536
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(134994..149684)
location: region:134994-149684:-1
so has part: feature:134994-149684:-1:exon
subclass of: SO_0000010

114685536
type: Gene
SIO_000068: ncbigene

position:134994:-1
position: 134994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149684:-1
position: 149684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134994-149684:-1:exon

LOC114685536
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685536
product: zinc finger protein 58-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_028860172.2
SIO_010081: LOC114685536
subclass of: SO_0000673
so part of: LOC114685536
location: complement(join(134994..137014,138536..138631,145464..145590,149571..149684))
location: region:134994-149684:-1
so has part: feature:149571-149684:-1:exon
so has part: feature:145464-145590:-1:exon
so has part: feature:138536-138631:-1:exon
so has part: feature:134994-137014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:149571-149684:-1:exon

position:149571:-1
position: 149571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:145464-145590:-1:exon

position:145464:-1
position: 145464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145590:-1
position: 145590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:138536-138631:-1:exon

position:138536:-1
position: 138536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138631:-1
position: 138631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:134994-137014:-1:exon

position:137014:-1
position: 137014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114685536
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like
translation: MEEMPSFWDVAIEFSAEERKCLEPAQWNLYRDVMLENYSNLVFLGLAVSKPHLVTLLEQRQDSSDVKRQAAANVQPGTTFNDYNDYNNGIDCNSLSIQSQRIHTREKPYQCKECGKGLSSYKTLSIHQRLHTGEKSYTCKECHKAFNTRSSLFIHQKNHTDEKTHKCEECGKLFYYPSMLKQHQRIHSGEKPHKCEKCGKAFYDPSFLKQHQRIHSGEKPYKCQKCGKTFYNFSLLKQHQRIHSEEKPYKCKECDKSFYTPSVLKQHQKIHSGKKPYKCEECGKSFYKPSVLKQHQRIHSGEKPCKCEECGKSFFTPSLLKQHQRIHSRENPCKCEECGSLFSSFSYLTQHQTVHYKDNPYKCEECGIRFSHSAILQKHSKIHRERRYKCEECHKTFLYHSSLKNHKVVHTRQKLYKCEECGKYFSSASCLRRHQIIHYEDNPYKCEECGRCFSSDACFRAHQTIHSEDNPYTCVQCDKRYSCSRDLQEHQTLHTGEKLYKCEECGKGFHYQSGFRRHKAIHTGEKAYKCEECHKAFRYLSSLKNHMGVHTGEKPYKCGECNKTFCYLSYLTKHKRVHSEEKSYKCEECHKAFHYLSSLMKHKTIHTGEKSYKCEECHKAFFYLSSLMRHKTVHTEEKPYKCEECHKAFYYISSLMRHKTVHTGENP
SIO_010081: LOC114685536
subclass of: SO_0000673
so part of: LOC114685536
location: complement(join(135240..137014,138536..138631,145464..145590,149571..149576))
location: region:135240-149576:-1
so has part: feature:149571-149576:-1:exon
so has part: feature:145464-145590:-1:exon
so has part: feature:138536-138631:-1:exon
so has part: feature:135240-137014:-1:exon

XP_028716005.1
type: Protein
SIO_000068: ncbiprotein

position:135240:-1
position: 135240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149576:-1
position: 149576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149571-149576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145464-145590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138536-138631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:135240-137014:-1:exon

LOC114685528
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(198774..226963)
location: region:198774-226963:-1
so has part: feature:198774-226963:-1:exon
subclass of: SO_0000010

114685528
type: Gene
SIO_000068: ncbigene

position:198774:-1
position: 198774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226963:-1
position: 226963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198774-226963:-1:exon

LOC114685528
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685528
product: zinc finger protein 58-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037209366.1
SIO_010081: LOC114685528
subclass of: SO_0000673
so part of: LOC114685528
location: complement(join(198774..201248,212001..212096,213062..213188,226325..226963))
location: region:198774-226963:-1
so has part: feature:226325-226963:-1:exon
so has part: feature:213062-213188:-1:exon
so has part: feature:212001-212096:-1:exon
so has part: feature:198774-201248:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:226325-226963:-1:exon

position:226325:-1
position: 226325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:213062-213188:-1:exon

position:213062:-1
position: 213062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213188:-1
position: 213188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:212001-212096:-1:exon

position:212001:-1
position: 212001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212096:-1
position: 212096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:198774-201248:-1:exon

position:201248:-1
position: 201248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114685528
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685528
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 58-like
translation: MEEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSHLVFLGLAVSRPHLVTLLEQRQDSSDVKRQAAANVQPGTIPDDYNMYRKAIDCNSLIMQHQRIHTREKPYKCEECGKGLSSHKTLSIHQRLHTGGKPYTCKECHKDFNTRSSLFIHQKNHTDKKTYKCEECGKSFYYPSMLKQHQSIHSGKKPYKCEKCGKLFYYPLMLKQHQKIHSGEKPYKCEECGKLFYYSSMLKQHQSIYSGERPYKCEECHKAFHYYSSLKNHKAVHTGEKLNKCKLRRKRFTKPPSTWRTRQLIYITEKAYKCEECGKCFCSSSSLRVHQKIHSEDNPYTCEECGKKFSSFAHLQEHQTVHTGKKPYKCEECYRAYRYHSHITKHKKVHTGQKPYQCEECDRWFSSSSSLRQHKKKKIHSEENSQN
SIO_010081: LOC114685528
subclass of: SO_0000673
so part of: LOC114685528
location: complement(join(200210..201248,212001..212096,213062..213188,226325..226330))
location: region:200210-226330:-1
so has part: feature:226325-226330:-1:exon
so has part: feature:213062-213188:-1:exon
so has part: feature:212001-212096:-1:exon
so has part: feature:200210-201248:-1:exon

XP_037065261.1
type: Protein
SIO_000068: ncbiprotein

position:200210:-1
position: 200210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226330:-1
position: 226330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226325-226330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213062-213188:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212001-212096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200210-201248:-1:exon

LOC114685546
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685546
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(236901..255433)
location: region:236901-255433:-1
so has part: feature:236901-255433:-1:exon
subclass of: SO_0000010

114685546
type: Gene
SIO_000068: ncbigene

position:236901:-1
position: 236901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255433:-1
position: 255433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236901-255433:-1:exon

LOC114685546
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685546
product: zinc finger protein 58-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_037209367.1
SIO_010081: LOC114685546
subclass of: SO_0000673
so part of: LOC114685546
location: complement(join(236901..237910,246656..246751,247894..248020,255313..255433))
location: region:236901-255433:-1
so has part: feature:255313-255433:-1:exon
so has part: feature:247894-248020:-1:exon
so has part: feature:246656-246751:-1:exon
so has part: feature:236901-237910:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255313-255433:-1:exon

position:255313:-1
position: 255313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247894-248020:-1:exon

position:247894:-1
position: 247894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248020:-1
position: 248020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:246656-246751:-1:exon

position:246656:-1
position: 246656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246751:-1
position: 246751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:236901-237910:-1:exon

position:237910:-1
position: 237910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114685546
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685546
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 58-like
translation: MEEMLSFWDVAIDFSPEERECLEPDQWNLYRDVMLENYSNLVFLGLIVSKPHLVTFLEQRQEPSYVQRQAAANVHPGTTPNDYNIYNKAIDCNPLHIQHQRIHTREKLYKCEECGKGLSSHKTLSIHKRLHTGEKPYMCIECHKAFNTRASLFIHQKNHTDEKTYKCEECGRLFYYPSMLKQHQRIHFGKKPYKCEECGKAFYELSFLQVHQRIHSGEKPYKCEECGKAFYEHHSFRYINKFTLQRNPTSVKSVAKDFLTLHTLSSIRQSTLERNHTSVRSVVSAFPYLHPLDDIKQFTGKTIPTSVKCVADVFIHLYPLEDIKKSILKTILICVYNVANGFPVLGIFRNIEQFILERNHTSVKSVVNVFPYHHPLDDIK
SIO_010081: LOC114685546
subclass of: SO_0000673
so part of: LOC114685546
location: complement(join(236996..237910,246656..246751,247894..248020,255313..255318))
location: region:236996-255318:-1
so has part: feature:255313-255318:-1:exon
so has part: feature:247894-248020:-1:exon
so has part: feature:246656-246751:-1:exon
so has part: feature:236996-237910:-1:exon

XP_037065262.1
type: Protein
SIO_000068: ncbiprotein

position:236996:-1
position: 236996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255318:-1
position: 255318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255313-255318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247894-248020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246656-246751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236996-237910:-1:exon

LOC114685547
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685547
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(273620..295270)
location: region:273620-295270:-1
so has part: feature:273620-295270:-1:exon
subclass of: SO_0000010

114685547
type: Gene
SIO_000068: ncbigene

position:273620:-1
position: 273620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295270:-1
position: 295270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273620-295270:-1:exon

LOC114685547
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685547
product: zinc finger protein 58-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_028860182.2
SIO_010081: LOC114685547
subclass of: SO_0000673
so part of: LOC114685547
location: complement(join(273620..274804,286968..287063,288852..288978,295161..295270))
location: region:273620-295270:-1
so has part: feature:295161-295270:-1:exon
so has part: feature:288852-288978:-1:exon
so has part: feature:286968-287063:-1:exon
so has part: feature:273620-274804:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295161-295270:-1:exon

position:295161:-1
position: 295161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288852-288978:-1:exon

position:288852:-1
position: 288852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288978:-1
position: 288978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:286968-287063:-1:exon

position:286968:-1
position: 286968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287063:-1
position: 287063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:273620-274804:-1:exon

position:274804:-1
position: 274804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114685547
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685547
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 58-like
translation: MEEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSNLDFLGLAVSKPHLVTFLEQRQESSDVKRQAAANVQPGITTNDYSIYTKAIDCNSLYIQRQRIHKREKLYKCEECGKGLSSHKTLSIHKRLHTGEKPYMCIECHKTFNTRESLFIHQKNHTDEKSYKCEECGKLFYYPSMLKQHQRIHSGEKPYKCEECGKAFYTSSVLKQHQRIHSGEKLYKCIECGKAFYEPSILQVHKRIHTAEKPYQCEKCGKCFCSSSYLRRHQIIHSEDNPYKCEQCGKCFSSSSSLEXHQIIHSEDNPYKCEECGKRFSCFSHVQEHHRVHTGEKPYKCEECGKCFSSSSSLRKHQPIHSEDYKCAECGRCFYSPSSLRRHQTIHWEDNPYKCEDCGRCFYSSFSLRRHQTIHSEDNPYTCAQCGKRFFYSRSLQEHQTLHTGEKLYKCEECHKSFRYHSGFMKHKRIHSGEKP
SIO_010081: LOC114685547
subclass of: SO_0000673
so part of: LOC114685547
location: complement(join(273622..274804,286968..287063,288852..288978,295161..295166))
location: region:273622-295166:-1
so has part: feature:295161-295166:-1:exon
so has part: feature:288852-288978:-1:exon
so has part: feature:286968-287063:-1:exon
so has part: feature:273622-274804:-1:exon

XP_028716015.2
type: Protein
SIO_000068: ncbiprotein

position:273622:-1
position: 273622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295166:-1
position: 295166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295161-295166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288852-288978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286968-287063:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273622-274804:-1:exon

LOC114685550
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685550
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(300794..300919)
location: region:300794-300919:-1
so has part: feature:300794-300919:-1:exon
subclass of: SO_0000623

114685550
type: Gene
SIO_000068: ncbigene

position:300794:-1
position: 300794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300919:-1
position: 300919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300794-300919:-1:exon

LOC114685550
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: snRNA
gene: LOC114685550
product: U6atac minor spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00619
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003733471.1
SIO_010081: LOC114685550
subclass of: SO_0000673
so part of: LOC114685550
location: complement(300794..300919)
location: region:300794-300919:-1
so has part: feature:300794-300919:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300794-300919:-1:exon

LOC119088704
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119088704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(305787..327643)
location: region:305787-327643:-1
so has part: feature:305787-327643:-1:exon
subclass of: SO_0000010

119088704
type: Gene
SIO_000068: ncbigene

position:305787:-1
position: 305787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327643:-1
position: 327643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305787-327643:-1:exon

LOC119088704
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC119088704
product: zinc finger protein 728-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_037209365.1
SIO_010081: LOC119088704
subclass of: SO_0000673
so part of: LOC119088704
location: complement(join(305787..309532,316062..316157,317121..317247,326862..327071,327605..327643))
location: region:305787-327643:-1
so has part: feature:327605-327643:-1:exon
so has part: feature:326862-327071:-1:exon
so has part: feature:317121-317247:-1:exon
so has part: feature:316062-316157:-1:exon
so has part: feature:305787-309532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:327605-327643:-1:exon

position:327605:-1
position: 327605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326862-327071:-1:exon

position:326862:-1
position: 326862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327071:-1
position: 327071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:317121-317247:-1:exon

position:317121:-1
position: 317121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317247:-1
position: 317247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:316062-316157:-1:exon

position:316062:-1
position: 316062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316157:-1
position: 316157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:305787-309532:-1:exon

position:309532:-1
position: 309532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119088704
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC119088704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 728-like
translation: MEEMLSFWDVAIDFSPEERECLEPAQWNLYRDVMLENYSNLVFLGLAMSKPYLVTFLEQRQEPSYVKRQEAANVHPGITTNDYNIYKTIDFNSLYIQRQRIHKREKLYKCEECGKGLSSHKTLSIHKRLHTGEKSYMCIECHKTFNTRESLFIHQKNHTDEKSYKCEECGKLFYYPSMLKQHQRIHSGEKPYKCEECGKSFYTPSVLKQHQRIHTGEKPYKCIECGKAFYESSILQVHKRIHTAEKPYQCEKCGKCFCSSSYLRQHQIIHFEQKPYKCEECGKCFCSSSSLRRHQTIHSEDSAYKCEECGKRFSYFSHLQAHQRVHTGEKPYKCEECGKCFSSCSSLRKHQPIHSEGNHYKCEECGKCFSLSSSLRRHQTIHWEDNPYKCEVCGRRFCSSSSLRGHQTIHSEDNPYMCIHCGKRFSCSRRLQEHQTVHTGEKLYKCEVCHKAFCYRSGLRRHKRVHTGDKP
SIO_010081: LOC119088704
subclass of: SO_0000673
so part of: LOC119088704
location: complement(join(308346..309532,316062..316157,317121..317247,326862..326867))
location: region:308346-326867:-1
so has part: feature:326862-326867:-1:exon
so has part: feature:317121-317247:-1:exon
so has part: feature:316062-316157:-1:exon
so has part: feature:308346-309532:-1:exon

XP_037065260.1
type: Protein
SIO_000068: ncbiprotein

position:308346:-1
position: 308346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326867:-1
position: 326867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326862-326867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:317121-317247:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:316062-316157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308346-309532:-1:exon

LOC114685529
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(346204..364444)
location: region:346204-364444:-1
so has part: feature:346204-364444:-1:exon
subclass of: SO_0000010

114685529
type: Gene
SIO_000068: ncbigene

position:346204:-1
position: 346204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364444:-1
position: 364444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346204-364444:-1:exon

LOC114685529
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685529
product: zinc finger protein 58-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_028860155.2
SIO_010081: LOC114685529
subclass of: SO_0000673
so part of: LOC114685529
location: complement(join(346204..349074,358526..358621,359590..359716,362905..364444))
location: region:346204-364444:-1
so has part: feature:362905-364444:-1:exon
so has part: feature:359590-359716:-1:exon
so has part: feature:358526-358621:-1:exon
so has part: feature:346204-349074:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362905-364444:-1:exon

position:362905:-1
position: 362905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:359590-359716:-1:exon

position:359590:-1
position: 359590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359716:-1
position: 359716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:358526-358621:-1:exon

position:358526:-1
position: 358526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358621:-1
position: 358621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:346204-349074:-1:exon

position:349074:-1
position: 349074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114685529
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like
translation: MEATFQLSLKSCDDKVLSPPDGENIMLLRHKSQGIGAGSDLNVFCLKEMLSFWDVAIEFSAEERECLEPAQWNLYRDVMLENYSNLDFLGLAESKPHLVTLLEQRQDSSDVTRQTAANMQPGTTTDDYNIYNKAIDCNSLHIQHQRIHTKEKPYKCKECGKALSSHKTLSIHQRLHTGEKPYKCKECHKAFSTRSSLFIHQKNHTDEKTYKCEECGKLFYYPSMLKQHQRIHSGEKPYKCEECGRAFYEPSFLQVHQRIHTAEKKHYKCEECGKCFSSLLYLKQHQAVHSKDSPYKCEECGKSFSHSAKLQEHHTIHSAERPYRCEECHKAFRYHSGLENHKAVHTGEKLYKCKLSGKEVTKTAFLIEDKAAHLAEKAYKCEECGKCFCSSSSLKRHQTIHSEDNPCKCEECGKRFSSFAHLQEHQTVHTGEKAYKCKECGKCFCSSSSLIRHQPIHSEDNPYKCAECGKMLSCFTNLQEHQTIHTGEKSYKCEKCGKCFYLSSSLRRHQTIHSEDNPYKCEECGRCFYSSLSLRGHQTIHSEDNPYTCVECGKRFSYSRSFREHQTIHTGEKPYKCEECHKAFHYLSSLRKHKKVHTGQKLFKCEDCDRCFSSSSTLRRHKKKTKIHSEGNS
SIO_010081: LOC114685529
subclass of: SO_0000673
so part of: LOC114685529
location: complement(join(347537..349074,358526..358621,359590..359716,362905..363045))
location: region:347537-363045:-1
so has part: feature:362905-363045:-1:exon
so has part: feature:359590-359716:-1:exon
so has part: feature:358526-358621:-1:exon
so has part: feature:347537-349074:-1:exon

XP_028715988.2
type: Protein
SIO_000068: ncbiprotein

position:347537:-1
position: 347537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363045:-1
position: 363045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362905-363045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359590-359716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358526-358621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347537-349074:-1:exon

LOC119088706
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119088706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 365937..396138
location: region:365937-396138:1
so has part: feature:365937-396138:1:exon
subclass of: SO_0000011

119088706
type: Gene
SIO_000068: ncbigene

position:365937:1
position: 365937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396138:1
position: 396138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365937-396138:1:exon

LOC119088706
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119088706
product: uncharacterized LOC119088706, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005092400.1
SIO_010081: LOC119088706
subclass of: SO_0000673
so part of: LOC119088706
location: join(365937..366109,367064..367154,395579..396138)
location: region:365937-396138:1
so has part: feature:365937-366109:1:exon
so has part: feature:367064-367154:1:exon
so has part: feature:395579-396138:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:365937-366109:1:exon

position:366109:1
position: 366109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:367064-367154:1:exon

position:367064:1
position: 367064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367154:1
position: 367154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:395579-396138:1:exon

position:395579:1
position: 395579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119088706
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119088706
product: uncharacterized LOC119088706, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005092399.1
SIO_010081: LOC119088706
subclass of: SO_0000673
so part of: LOC119088706
location: join(366297..366432,367064..367154,395579..396138)
location: region:366297-396138:1
so has part: feature:366297-366432:1:exon
so has part: feature:367064-367154:1:exon
so has part: feature:395579-396138:1:exon

position:366297:1
position: 366297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366297-366432:1:exon

position:366432:1
position: 366432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:367064-367154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395579-396138:1:exon

LOC114685548
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685548
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(401212..418370)
location: region:401212-418370:-1
so has part: feature:401212-418370:-1:exon
subclass of: SO_0000010

114685548
type: Gene
SIO_000068: ncbigene

position:401212:-1
position: 401212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418370:-1
position: 418370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401212-418370:-1:exon

LOC114685548
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685548
product: zinc finger protein 93-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 146 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_028860183.2
SIO_010081: LOC114685548
subclass of: SO_0000673
so part of: LOC114685548
location: complement(join(401212..403156,405471..405566,406052..406178,418223..418370))
location: region:401212-418370:-1
so has part: feature:418223-418370:-1:exon
so has part: feature:406052-406178:-1:exon
so has part: feature:405471-405566:-1:exon
so has part: feature:401212-403156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:418223-418370:-1:exon

position:418223:-1
position: 418223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:406052-406178:-1:exon

position:406052:-1
position: 406052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406178:-1
position: 406178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405471-405566:-1:exon

position:405471:-1
position: 405471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405566:-1
position: 405566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:401212-403156:-1:exon

position:403156:-1
position: 403156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114685548
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685548
product: zinc finger protein 93-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 139 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037209364.1
SIO_010081: LOC114685548
subclass of: SO_0000673
so part of: LOC114685548
location: complement(join(401212..403156,405471..405566,406052..406178,406569..406741,418223..418370))
location: region:401212-418370:-1
so has part: feature:418223-418370:-1:exon
so has part: feature:406569-406741:-1:exon
so has part: feature:406052-406178:-1:exon
so has part: feature:405471-405566:-1:exon
so has part: feature:401212-403156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:418223-418370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:406569-406741:-1:exon

position:406569:-1
position: 406569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406741:-1
position: 406741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:406052-406178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405471-405566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:401212-403156:-1:exon

LOC114685548
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685548
product: zinc finger protein 93-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 146 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_037209363.1
SIO_010081: LOC114685548
subclass of: SO_0000673
so part of: LOC114685548
location: complement(join(401212..403156,405471..405566,406052..406178,418051..418150))
location: region:401212-418150:-1
so has part: feature:418051-418150:-1:exon
so has part: feature:406052-406178:-1:exon
so has part: feature:405471-405566:-1:exon
so has part: feature:401212-403156:-1:exon

position:418150:-1
position: 418150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418051-418150:-1:exon

position:418051:-1
position: 418051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:406052-406178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405471-405566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:401212-403156:-1:exon

LOC114685548
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685548
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 93-like isoform X1
translation: MEKLLSFRDVAIEFSAEEREYLELAQWNLYRDVMLENYSNLVFLGLAFSKPYLVTFLEQRKEPWSVKRHAKVGAHAGSKSYKCKECGKTFDWKPLLIKHQSIHTGGKPYICKECDKGFNYSFNLKKHQRIHTGEKPYKCEVCGKAFLCSSYLRKHQRIHTGEKPYKCEDCGKAFTSGSGLVVHRRVHTGEKPYECEECGKAFTIRIALSKHQRIHTGEKPYKCDECGKTFNVLSTLSKHQRIHTGEKPYKCEECGMAFNVRCILSKHQRIHTGEKPYKCQECGKAFICSSSLHQHQRIHTGEKPYKCDECGQAFTLASYLRKHRRIHIGEKPYTCKECGKAFYCSFSLIYHQRVHIGENPYKCDECGKTFSIYSSYMNHQRIHSGEKPYKCNECEKSFNNRQNLTRHQKVHTGEKAYKCKECGKAFTCTTGLTQHEKIHTGEKPYTCEECGKAFNSSSNLKHHCRLHSGEQPSKCEQHGNTLENCSGFTRHNRRHTRNNPV
SIO_010081: LOC114685548
subclass of: SO_0000673
so part of: LOC114685548
location: complement(join(401880..403156,405471..405566,406052..406178,418223..418228))
location: region:401880-418228:-1
so has part: feature:418223-418228:-1:exon
so has part: feature:406052-406178:-1:exon
so has part: feature:405471-405566:-1:exon
so has part: feature:401880-403156:-1:exon

XP_028716016.1
type: Protein
SIO_000068: ncbiprotein

position:401880:-1
position: 401880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418228:-1
position: 418228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418223-418228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:406052-406178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405471-405566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:401880-403156:-1:exon

LOC114685548
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685548
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 93-like isoform X2
translation: MQKLLSFRDVAIEFSAEEREYLELAQWNLYRDVMLENYSNLVFLGLAFSKPYLVTFLEQRKEPWSVKRHAKVGAHAGSKSYKCKECGKTFDWKPLLIKHQSIHTGGKPYICKECDKGFNYSFNLKKHQRIHTGEKPYKCEVCGKAFLCSSYLRKHQRIHTGEKPYKCEDCGKAFTSGSGLVVHRRVHTGEKPYECEECGKAFTIRIALSKHQRIHTGEKPYKCDECGKTFNVLSTLSKHQRIHTGEKPYKCEECGMAFNVRCILSKHQRIHTGEKPYKCQECGKAFICSSSLHQHQRIHTGEKPYKCDECGQAFTLASYLRKHRRIHIGEKPYTCKECGKAFYCSFSLIYHQRVHIGENPYKCDECGKTFSIYSSYMNHQRIHSGEKPYKCNECEKSFNNRQNLTRHQKVHTGEKAYKCKECGKAFTCTTGLTQHEKIHTGEKPYTCEECGKAFNSSSNLKHHCRLHSGEQPSKCEQHGNTLENCSGFTRHNRRHTRNNPV
SIO_010081: LOC114685548
subclass of: SO_0000673
so part of: LOC114685548
location: complement(join(401880..403156,405471..405566,406052..406178,418051..418056))
location: region:401880-418056:-1
so has part: feature:418051-418056:-1:exon
so has part: feature:406052-406178:-1:exon
so has part: feature:405471-405566:-1:exon
so has part: feature:401880-403156:-1:exon

XP_037065258.1
type: Protein
SIO_000068: ncbiprotein

position:418056:-1
position: 418056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418051-418056:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:406052-406178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405471-405566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:401880-403156:-1:exon

LOC114685548
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685548
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 501-like isoform X3
translation: MLENYSNLVFLGLAFSKPYLVTFLEQRKEPWSVKRHAKVGAHAGSKSYKCKECGKTFDWKPLLIKHQSIHTGGKPYICKECDKGFNYSFNLKKHQRIHTGEKPYKCEVCGKAFLCSSYLRKHQRIHTGEKPYKCEDCGKAFTSGSGLVVHRRVHTGEKPYECEECGKAFTIRIALSKHQRIHTGEKPYKCDECGKTFNVLSTLSKHQRIHTGEKPYKCEECGMAFNVRCILSKHQRIHTGEKPYKCQECGKAFICSSSLHQHQRIHTGEKPYKCDECGQAFTLASYLRKHRRIHIGEKPYTCKECGKAFYCSFSLIYHQRVHIGENPYKCDECGKTFSIYSSYMNHQRIHSGEKPYKCNECEKSFNNRQNLTRHQKVHTGEKAYKCKECGKAFTCTTGLTQHEKIHTGEKPYTCEECGKAFNSSSNLKHHCRLHSGEQPSKCEQHGNTLENCSGFTRHNRRHTRNNPV
SIO_010081: LOC114685548
subclass of: SO_0000673
so part of: LOC114685548
location: complement(join(401880..403156,405471..405566,406052..406085))
location: region:401880-406085:-1
so has part: feature:406052-406085:-1:exon
so has part: feature:405471-405566:-1:exon
so has part: feature:401880-403156:-1:exon

XP_037065259.1
type: Protein
SIO_000068: ncbiprotein

position:406085:-1
position: 406085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406052-406085:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405471-405566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:401880-403156:-1:exon

LOC114685534
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 425420..441558
location: region:425420-441558:1
so has part: feature:425420-441558:1:exon
subclass of: SO_0000010

114685534
type: Gene
SIO_000068: ncbigene

position:425420:1
position: 425420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441558:1
position: 441558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425420-441558:1:exon

LOC114685534
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685534
product: zinc finger protein 58-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_028860167.2
SIO_010081: LOC114685534
subclass of: SO_0000673
so part of: LOC114685534
location: join(425420..425483,431621..431747,432254..432331,437079..441558)
location: region:425420-441558:1
so has part: feature:425420-425483:1:exon
so has part: feature:431621-431747:1:exon
so has part: feature:432254-432331:1:exon
so has part: feature:437079-441558:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425420-425483:1:exon

position:425483:1
position: 425483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:431621-431747:1:exon

position:431621:1
position: 431621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431747:1
position: 431747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:432254-432331:1:exon

position:432254:1
position: 432254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432331:1
position: 432331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:437079-441558:1:exon

position:437079:1
position: 437079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114685534
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685534
product: zinc finger protein 58-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_028860166.2
SIO_010081: LOC114685534
subclass of: SO_0000673
so part of: LOC114685534
location: join(425483..425563,431621..431747,432254..432331,437079..441558)
location: region:425483-441558:1
so has part: feature:425483-425563:1:exon
so has part: feature:431621-431747:1:exon
so has part: feature:432254-432331:1:exon
so has part: feature:437079-441558:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425483-425563:1:exon

position:425563:1
position: 425563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:431621-431747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432254-432331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:437079-441558:1:exon

LOC114685534
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X1
translation: MEEMLSFWDVAIDFTPEEWECLEPAQWDLYRDVILENYSHLDFLGLTVSKPYLVTFLEQRQGPWDVKKQAGTTPNNCNNYSKTTDCNSLLIQHQRIHTGKKPYKCEECGKALSSRSTLSIHQRLHTGDKPYKCKECHKTFSTRSSLFIHQKNHTDEKTYKCGECGKLFYYPSMLKQHQRIHSGEKPYKCEECGKAFYDPSFLKQHQRVHCGEKPYKCEECGKTFSSALILNQHKGIHSGQKKYKCEECGKSFCYPSFLKQHQRIHSGENPYKCENCGKRFYCSPHLQEHQRVHTGEKPYNCEECHKAFRNHSGLRKHKAVHTGEKPYKCELCGKGFTKPSVLTEHKIAHTGEKPYKCEECGKCFSSSSALKRHQRIHSEDNPYKCGECGRAFSTLSTLTQHKFVHSGEKPYKCEECGKAFSYNFSLIQHKLSHTGVKSYQCEECKKMFYSTSKLKKHRRLHCQEKLYKCEVCGKAFSSNSSLVQHKIVHTREKCHKCEECGKMFACTSKLKRHKRTHCQEKPFKCEVCGKDFRTRPELSVHKRTHTIEKPHKCEECGKTFCTFSYLTVHKLHHTGEKSCKCEECGKMFYSTLDLKKHQKIHTGEKPYKCEECHKAFTTHTTLKRHKTVHSGEKPYKCELCGKGFIKLSVLTEHKIAHTGEKPYKCEVCGKVFSYSSDLKRHQIIHSEDNPYKCGECGKAFIKLYTLTQHKIVHTREKPFKCEECGKGFSCSSYVKVHKTIHSEENNHKCEECGKAFVNHYTLSRHKTVHTGEKSYRCNKKFTCL
SIO_010081: LOC114685534
subclass of: SO_0000673
so part of: LOC114685534
location: join(425558..425563,431621..431747,432254..432331,437079..439222)
location: region:425558-439222:1
so has part: feature:425558-425563:1:exon
so has part: feature:431621-431747:1:exon
so has part: feature:432254-432331:1:exon
so has part: feature:437079-439222:1:exon

XP_028715999.1
type: Protein
SIO_000068: ncbiprotein

position:425558:1
position: 425558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439222:1
position: 439222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425558-425563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:431621-431747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432254-432331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:437079-439222:1:exon

LOC114685534
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X2
translation: MLSFWDVAIDFTPEEWECLEPAQWDLYRDVILENYSHLDFLGLTVSKPYLVTFLEQRQGPWDVKKQAGTTPNNCNNYSKTTDCNSLLIQHQRIHTGKKPYKCEECGKALSSRSTLSIHQRLHTGDKPYKCKECHKTFSTRSSLFIHQKNHTDEKTYKCGECGKLFYYPSMLKQHQRIHSGEKPYKCEECGKAFYDPSFLKQHQRVHCGEKPYKCEECGKTFSSALILNQHKGIHSGQKKYKCEECGKSFCYPSFLKQHQRIHSGENPYKCENCGKRFYCSPHLQEHQRVHTGEKPYNCEECHKAFRNHSGLRKHKAVHTGEKPYKCELCGKGFTKPSVLTEHKIAHTGEKPYKCEECGKCFSSSSALKRHQRIHSEDNPYKCGECGRAFSTLSTLTQHKFVHSGEKPYKCEECGKAFSYNFSLIQHKLSHTGVKSYQCEECKKMFYSTSKLKKHRRLHCQEKLYKCEVCGKAFSSNSSLVQHKIVHTREKCHKCEECGKMFACTSKLKRHKRTHCQEKPFKCEVCGKDFRTRPELSVHKRTHTIEKPHKCEECGKTFCTFSYLTVHKLHHTGEKSCKCEECGKMFYSTLDLKKHQKIHTGEKPYKCEECHKAFTTHTTLKRHKTVHSGEKPYKCELCGKGFIKLSVLTEHKIAHTGEKPYKCEVCGKVFSYSSDLKRHQIIHSEDNPYKCGECGKAFIKLYTLTQHKIVHTREKPFKCEECGKGFSCSSYVKVHKTIHSEENNHKCEECGKAFVNHYTLSRHKTVHTGEKSYRCNKKFTCL
SIO_010081: LOC114685534
subclass of: SO_0000673
so part of: LOC114685534
location: join(431624..431747,432254..432331,437079..439222)
location: region:431624-439222:1
so has part: feature:431624-431747:1:exon
so has part: feature:432254-432331:1:exon
so has part: feature:437079-439222:1:exon

XP_028716000.1
type: Protein
SIO_000068: ncbiprotein

position:431624:1
position: 431624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431624-431747:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:432254-432331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:437079-439222:1:exon

LOC119088707
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119088707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 448431..449614
location: region:448431-449614:1
so has part: feature:448431-449614:1:exon
subclass of: SO_0000011

119088707
type: Gene
SIO_000068: ncbigene

position:448431:1
position: 448431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449614:1
position: 449614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448431-449614:1:exon

LOC119088707
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119088707
product: uncharacterized LOC119088707
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005092402.1
SIO_010081: LOC119088707
subclass of: SO_0000673
so part of: LOC119088707
location: join(448431..448662,448777..449614)
location: region:448431-449614:1
so has part: feature:448431-448662:1:exon
so has part: feature:448777-449614:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:448431-448662:1:exon

position:448662:1
position: 448662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:448777-449614:1:exon

position:448777:1
position: 448777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114685545
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 450022..461367
location: region:450022-461367:1
so has part: feature:450022-461367:1:exon
subclass of: SO_0000010

114685545
type: Gene
SIO_000068: ncbigene

position:450022:1
position: 450022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461367:1
position: 461367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450022-461367:1:exon

LOC114685545
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685545
product: zinc finger protein 58-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_028860180.2
SIO_010081: LOC114685545
subclass of: SO_0000673
so part of: LOC114685545
location: join(450022..450172,453342..453468,454148..454243,459824..461367)
location: region:450022-461367:1
so has part: feature:450022-450172:1:exon
so has part: feature:453342-453468:1:exon
so has part: feature:454148-454243:1:exon
so has part: feature:459824-461367:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450022-450172:1:exon

position:450172:1
position: 450172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:453342-453468:1:exon

position:453342:1
position: 453342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453468:1
position: 453468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:454148-454243:1:exon

position:454148:1
position: 454148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454243:1
position: 454243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:459824-461367:1:exon

position:459824:1
position: 459824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114685545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685545
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 58-like
translation: MEEMLSFWDVAIEFSAEEKEWLEHAQWNLYRDVMLENYSHLVFLGLAVTKPHLVTFLEQGQVPSDVKRQAAAIVHPGITTNDYNIYNKTIDCNSLHIQRQRIHTKEKPYKCKECGKALSSRSALSIHQRLHTGDKPYMCTECHKTFNTRSSLFIHQKNHTDEKSYKCEECGKTFYYPSMLKQHQRIHSGEKPYKCEECGKGFLXSLRLQVHQRIHSGEKPYKCEECHKAFRKYSACWRHMRVHIAEKFYQCEMSAQGFSKPAFLIGNRAVHTAEKAYKCEECGKCFCSSSSLIRHQTIHSEDNPYKCAECGKRFSSFARLQEHQTVHTGEKPHKCELCAKCFCSSSSLRRHQAIHSEDNPYKCSECGKRFSYFTNLQEHQTIHTGEKSYKCDECGKCFYLSSSLRRHQAIHSEDNPYKCEECGRCFSSSSSLRRHKQKKKIHSEDNP
SIO_010081: LOC114685545
subclass of: SO_0000673
so part of: LOC114685545
location: join(450167..450172,453342..453468,454148..454243,459824..460937)
location: region:450167-460937:1
so has part: feature:450167-450172:1:exon
so has part: feature:453342-453468:1:exon
so has part: feature:454148-454243:1:exon
so has part: feature:459824-460937:1:exon

XP_028716013.1
type: Protein
SIO_000068: ncbiprotein

position:450167:1
position: 450167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460937:1
position: 460937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450167-450172:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453342-453468:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:454148-454243:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459824-460937:1:exon

LOC114685541
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 464890..481979
location: region:464890-481979:1
so has part: feature:464890-481979:1:exon
subclass of: SO_0000010

114685541
type: Gene
SIO_000068: ncbigene

position:464890:1
position: 464890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481979:1
position: 481979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464890-481979:1:exon

LOC114685541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685541
product: zinc finger protein 58-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_037209362.1
SIO_010081: LOC114685541
subclass of: SO_0000673
so part of: LOC114685541
location: join(464890..466045,469819..469863,472616..472742,473329..473424,480162..481979)
location: region:464890-481979:1
so has part: feature:464890-466045:1:exon
so has part: feature:469819-469863:1:exon
so has part: feature:472616-472742:1:exon
so has part: feature:473329-473424:1:exon
so has part: feature:480162-481979:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464890-466045:1:exon

position:466045:1
position: 466045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:469819-469863:1:exon

position:469819:1
position: 469819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469863:1
position: 469863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:472616-472742:1:exon

position:472616:1
position: 472616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472742:1
position: 472742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:473329-473424:1:exon

position:473329:1
position: 473329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473424:1
position: 473424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:480162-481979:1:exon

position:480162:1
position: 480162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114685541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like
translation: MLSTQEMLSFWDVAIEFSAEERECLKPAQWNLYRDIMLENYSNLDFLGLAVSKPHLVTFLEQTQGPGDLKRQATDSVHPGTIPNDCNNYSEVIDCKSLLIQRQRFHTGKKLYKCEECGKALSSQKTLSIHQRLHTGAKPYTCKGCHKTFNTRSSLFIHQKTHTDEKSYNCEECGKSFYYPPLLKQHQRIHSGEKPYKCEECGKAFYFPSYLKQHQQIHWGNNPYKCEECGKRFSCSLRLQVHQIIHTGEKLYKCEECHKAFRYHSSFWRHMRVHIAEKSYQCELSGKGFTKPAFLIGSRAALITRKAYKCEECGKCFCSPSSLKRHQTIHSEDNPYKCAECGKRFSYFAHLQEHQTVHTGEKPYKCEECGKCFSSSSSLRRHQTSHSEDSPYKCAECGKWFSCSRSLREHQAIHTGEKPYKCKECHKAFRKYSALWKHKSVHNAEKSYQCKKCGRCFASSSSLRRHKSIHSEDYPYKCEECGRCFYSYLFFRRHQIIHSEDSPYKCVECGKRFSCSRSLRGHQAIHSGEKPYKCKECHEAFRNSSSLWRHKRVHTSDKS
SIO_010081: LOC114685541
subclass of: SO_0000673
so part of: LOC114685541
location: join(469849..469863,472616..472742,473329..473424,480162..481603)
location: region:469849-481603:1
so has part: feature:469849-469863:1:exon
so has part: feature:472616-472742:1:exon
so has part: feature:473329-473424:1:exon
so has part: feature:480162-481603:1:exon

XP_037065257.1
type: Protein
SIO_000068: ncbiprotein

position:469849:1
position: 469849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481603:1
position: 481603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469849-469863:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:472616-472742:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473329-473424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480162-481603:1:exon

LOC114685535
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 491199..549377
location: region:491199-549377:1
so has part: feature:491199-549377:1:exon

114685535
type: Gene
SIO_000068: ncbigene

position:491199:1
position: 491199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549377:1
position: 549377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491199-549377:1:exon

LOC114685535
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114685535
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114685535
subclass of: SO_0000673
so part of: LOC114685535
location: 491199..491595
location: region:491199-491595:1
so has part: feature:491199-491595:1:exon

position:491595:1
position: 491595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491199-491595:1:exon

LOC114685535
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114685535
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114685535
subclass of: SO_0000673
so part of: LOC114685535
location: 502620..502746
location: region:502620-502746:1
so has part: feature:502620-502746:1:exon

position:502620:1
position: 502620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502746:1
position: 502746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502620-502746:1:exon

LOC114685535
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114685535
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114685535
subclass of: SO_0000673
so part of: LOC114685535
location: 503436..503531
location: region:503436-503531:1
so has part: feature:503436-503531:1:exon

position:503436:1
position: 503436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503531:1
position: 503531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503436-503531:1:exon

LOC114685535
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114685535
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114685535
subclass of: SO_0000673
so part of: LOC114685535
location: 508841..509975
location: region:508841-509975:1
so has part: feature:508841-509975:1:exon

position:508841:1
position: 508841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509975:1
position: 509975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508841-509975:1:exon

LOC114685535
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114685535
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114685535
subclass of: SO_0000673
so part of: LOC114685535
location: 510914..510974
location: region:510914-510974:1
so has part: feature:510914-510974:1:exon

position:510914:1
position: 510914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510974:1
position: 510974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510914-510974:1:exon

LOC114685535
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114685535
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114685535
subclass of: SO_0000673
so part of: LOC114685535
location: 520513..520563
location: region:520513-520563:1
so has part: feature:520513-520563:1:exon

position:520513:1
position: 520513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520563:1
position: 520563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520513-520563:1:exon

LOC114685535
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114685535
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114685535
subclass of: SO_0000673
so part of: LOC114685535
location: 527606..527732
location: region:527606-527732:1
so has part: feature:527606-527732:1:exon

position:527606:1
position: 527606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527732:1
position: 527732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527606-527732:1:exon

LOC114685535
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114685535
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114685535
subclass of: SO_0000673
so part of: LOC114685535
location: 528434..528529
location: region:528434-528529:1
so has part: feature:528434-528529:1:exon

position:528434:1
position: 528434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528529:1
position: 528529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528434-528529:1:exon

LOC114685544
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 536135..539053
location: region:536135-539053:1
so has part: feature:536135-539053:1:exon

114685544
type: Gene
SIO_000068: ncbigene

position:536135:1
position: 536135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539053:1
position: 539053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536135-539053:1:exon

LOC114685544
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114685544
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114685544
subclass of: SO_0000673
so part of: LOC114685544
location: 536135..539053
location: region:536135-539053:1
so has part: feature:536135-539053:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:536135-539053:1:exon

LOC114685535
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114685535
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114685535
subclass of: SO_0000673
so part of: LOC114685535
location: 544074..546221
location: region:544074-546221:1
so has part: feature:544074-546221:1:exon

position:544074:1
position: 544074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546221:1
position: 546221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544074-546221:1:exon

LOC114685535
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114685535
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114685535
subclass of: SO_0000673
so part of: LOC114685535
location: 549292..549377
location: region:549292-549377:1
so has part: feature:549292-549377:1:exon

position:549292:1
position: 549292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549292-549377:1:exon

LOC114685537
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 549423..578387
location: region:549423-578387:1
so has part: feature:549423-578387:1:exon
subclass of: SO_0000010

114685537
type: Gene
SIO_000068: ncbigene

position:549423:1
position: 549423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578387:1
position: 578387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549423-578387:1:exon

LOC114685537
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685537
product: zinc finger protein 420-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037209576.1
SIO_010081: LOC114685537
subclass of: SO_0000673
so part of: LOC114685537
location: join(549423..549510,556120..556246,556737..556832,558884..560199,562973..563173,566773..566899,567401..567496,576504..578387)
location: region:549423-578387:1
so has part: feature:549423-549510:1:exon
so has part: feature:556120-556246:1:exon
so has part: feature:556737-556832:1:exon
so has part: feature:558884-560199:1:exon
so has part: feature:562973-563173:1:exon
so has part: feature:566773-566899:1:exon
so has part: feature:567401-567496:1:exon
so has part: feature:576504-578387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:549423-549510:1:exon

position:549510:1
position: 549510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:556120-556246:1:exon

position:556120:1
position: 556120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556246:1
position: 556246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:556737-556832:1:exon

position:556737:1
position: 556737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556832:1
position: 556832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:558884-560199:1:exon

position:558884:1
position: 558884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560199:1
position: 560199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:562973-563173:1:exon

position:562973:1
position: 562973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563173:1
position: 563173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:566773-566899:1:exon

position:566773:1
position: 566773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566899:1
position: 566899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:567401-567496:1:exon

position:567401:1
position: 567401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567496:1
position: 567496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:576504-578387:1:exon

position:576504:1
position: 576504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114685537
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685537
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 420-like
translation: MEEMLSFWDVAIDFSPEEWECLEPAQWNLYRDVMLENYSNLVFLGLAVSKPCLVTFLEQRQGPWDVKIQASGTMHPGRTPSDCNNYIKVIDCKSLLIQRQKIHTEEKPYKCEECGKALSSHKTLSIHQRLHTGDKPYTCKECHKTFNTRASLFIHQKNHTDEKTNKCEECGKSFHYFSMLKQHQRIHSGEKPYKCEECGKALSSQKTLSIHQRLHTGNKPYMCSECHKTFNTRSSLFIHQKNHTDEKPYKCEECGKSFCYPSFLKQHQRIHCGENPYKYEKCNAHLQEYQTIHTGEKPYKCEECHKAFRYHSALRIHKTVHSGEKPYKCEECGKCFSSSSCLRRHQTIHSEDNPYKCEVCGRRFCSSSSLRRHQTFHSEDNPYKCVECGKRFSCSASLQEHQTVHTGEKPHKCEECHKAFRYHSALRRHKRVHTREKSYQCAECGKCFSSSLCLGRHQAIHTEDNPYKCAECGKAFVNLYSLTRHMIVHTGEKSYKWLKKFPCSDLKTHQVTYSEKTKEAHTRLPVRCLHRILGCVVHAIVTSQGAVQEIPIELSFLYRCVFLKLGRESCPVLQSCCVSDMEEMLSFWDVAIDFSPEEWECLEPSQWNLYRDVMLENYSHLDFLGLAVSKPFLVTFLEQRQGPSGVKRQATALEHSGTTPNECNDYSKVFDDNSFLIQHQRIHTREKPFKCEECGKAFSSRSTLSVHQRLHTGEKPYKCEDCCKTFNTRCKLSIHQRIHTGEKPYKCEECHKAFSTRSTLSVHQKNHTGEKPYKCEECGKSFYYPSMLKQHQRIHSAEKPYKCEECGKAFYDPSFLKKHQRVHCGEKPYKCEECGKCFSYSSDLKIHQRIHSEDNPYKCGECGRAFSKLSTLAKHKFVHSREKSYKCEECGNAFASKFSMVQHKLCHIGEKSYQCEGCGQMFYSTSDLKKHRRLHCQEKLYKCEVCGKAFSSNSSLTQHKIVHTGEKRHKCEKCGKKFAYPSKLKRHERIHSGEKPYICVVCGKIFCTHAELSVHKRSHTVEKPHKCEECGKTFCMLSSLPLHKLRHTGEKSYKCEECEKMFYSTLDLKKHLIIHTGEKPYKCEECHKAFRNQSALNRHKAVHQERNSTSVTNVTKSLPILQTLKDIKIFTLKTTHTSVGNVAKPLLIFIALLDTRQFILERNPTNVKSLHIFST
SIO_010081: LOC114685537
subclass of: SO_0000673
so part of: LOC114685537
location: join(549505..549510,556120..556246,556737..556832,558884..560199,562973..563173,566773..566899,567401..567496,576504..578063)
location: region:549505-578063:1
so has part: feature:549505-549510:1:exon
so has part: feature:556120-556246:1:exon
so has part: feature:556737-556832:1:exon
so has part: feature:558884-560199:1:exon
so has part: feature:562973-563173:1:exon
so has part: feature:566773-566899:1:exon
so has part: feature:567401-567496:1:exon
so has part: feature:576504-578063:1:exon

XP_037065471.1
type: Protein
SIO_000068: ncbiprotein

position:549505:1
position: 549505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578063:1
position: 578063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549505-549510:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556120-556246:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:556737-556832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558884-560199:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562973-563173:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:566773-566899:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:567401-567496:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576504-578063:1:exon

LOC114685543
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(594797..604517)
location: region:594797-604517:-1
so has part: feature:594797-604517:-1:exon

114685543
type: Gene
SIO_000068: ncbigene

position:594797:-1
position: 594797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604517:-1
position: 604517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594797-604517:-1:exon

LOC114685543
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114685543
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC114685543
subclass of: SO_0000673
so part of: LOC114685543
location: complement(594797..596938)
location: region:594797-596938:-1
so has part: feature:594797-596938:-1:exon

position:596938:-1
position: 596938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594797-596938:-1:exon

LOC114685543
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114685543
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC114685543
subclass of: SO_0000673
so part of: LOC114685543
location: complement(597121..598177)
location: region:597121-598177:-1
so has part: feature:597121-598177:-1:exon

position:597121:-1
position: 597121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598177:-1
position: 598177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597121-598177:-1:exon

LOC114685543
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114685543
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC114685543
subclass of: SO_0000673
so part of: LOC114685543
location: complement(601153..601248)
location: region:601153-601248:-1
so has part: feature:601153-601248:-1:exon

position:601153:-1
position: 601153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601248:-1
position: 601248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601153-601248:-1:exon

LOC114685543
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114685543
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC114685543
subclass of: SO_0000673
so part of: LOC114685543
location: complement(602443..602569)
location: region:602443-602569:-1
so has part: feature:602443-602569:-1:exon

position:602443:-1
position: 602443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602569:-1
position: 602569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602443-602569:-1:exon

LOC114685543
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114685543
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC114685543
subclass of: SO_0000673
so part of: LOC114685543
location: complement(603395..604517)
location: region:603395-604517:-1
so has part: feature:603395-604517:-1:exon

position:603395:-1
position: 603395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603395-604517:-1:exon

LOC114685533
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114685533
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(613193..670380)
location: region:613193-670380:-1
so has part: feature:613193-670380:-1:exon
subclass of: SO_0000010

114685533
type: Gene
SIO_000068: ncbigene

position:613193:-1
position: 613193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670380:-1
position: 670380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613193-670380:-1:exon

LOC114685533
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114685533
product: zinc finger protein 58-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_037209361.1
SIO_010081: LOC114685533
subclass of: SO_0000673
so part of: LOC114685533
location: complement(join(613193..615669,626230..626325,627117..627243,654736..655003,670047..670380))
location: region:613193-670380:-1
so has part: feature:670047-670380:-1:exon
so has part: feature:654736-655003:-1:exon
so has part: feature:627117-627243:-1:exon
so has part: feature:626230-626325:-1:exon
so has part: feature:613193-615669:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:670047-670380:-1:exon

position:670047:-1
position: 670047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:654736-655003:-1:exon

position:654736:-1
position: 654736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655003:-1
position: 655003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:627117-627243:-1:exon

position:627117:-1
position: 627117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627243:-1
position: 627243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:626230-626325:-1:exon

position:626230:-1
position: 626230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626325:-1
position: 626325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:613193-615669:-1:exon

position:615669:-1
position: 615669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114685533
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114685533
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like
translation: MEEILSFWDVAIDFSAEEREYLEPAQWNLYRDVMLENYSNLVFLGLAESKPHLVTLLEQRQDSSDVKRQAAANVQPGTTPNDDNVYSKAIDCNSLYNQHQRIHTREKSYKCEECGKSFHYPSKLKQHQRIHSGEKPYKCEECGKSFHYPSKMKQHQRIHSGEKPYKCGECGKSFHYPSILKQHQRIHSGEKPYKCEECGKAFHVPSVLREHQRIHSGEKPYKCEECGKCFSSSSCLRRHQTIHSEDSLYKCEECGRCFCSSSSLRQHQTFHSEDYPYKCVECGKRFSCSASLQEHQTVHTGEKPHKCEECHKAFHYHSSLRRHKRVHTGEKNSFQCEECGKCFSSFSYLRQHKAVHSKDNPCKGEECGKSFSHSAKLQKHSTIHSAERLYKCEECHKAFRYHSGLENHKAVHIQEKLHTSELSGKELTKTAFLIEDKAAHIAEKAYKCEECEKCFSSPLALRRHQTIHSENNPYTCAECGKRFFSSARLQQHQTVHTGEKPYKCEECGKCFGSTSSLRRHQEIHADNNPNKCEVCGKWFSSVTNLQEHQTIHTGEKSCRCEECGKCFYLSSSLRRHRAIHSKDNPYMCTECDKGFSRLSYLQEHQKTHTGEKAFKCEECDKCFYFSSSLRRHQLIHCKDNPYKCEECGRCFSSSLSLRGHQTIHSEHNPYTCVQCGKRYSCSRSLQEHQTIHTGEKPYKCEECGKAFHYHSSLRKHKRVHTGVKPYQCEECHKTFCYDSSLWKHKGIHTGEKPYQCEECHKTFCYDSSLWKHKGIHTGEKPYKCEECHKAFHYHSSLGEHKKVHTGEKPYQCEECDRCFSSSSALNRHKKKKIPSEDNP
SIO_010081: LOC114685533
subclass of: SO_0000673
so part of: LOC114685533
location: complement(join(613379..615669,626230..626325,627117..627243,654736..654741))
location: region:613379-654741:-1
so has part: feature:654736-654741:-1:exon
so has part: feature:627117-627243:-1:exon
so has part: feature:626230-626325:-1:exon
so has part: feature:613379-615669:-1:exon

XP_037065256.1
type: Protein
SIO_000068: ncbiprotein

position:613379:-1
position: 613379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654741:-1
position: 654741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654736-654741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:627117-627243:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626230-626325:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613379-615669:-1:exon

LOC114686112
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114686112
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(685334..691749)
location: region:685334-691749:-1
so has part: feature:685334-691749:-1:exon
subclass of: SO_0000011

114686112
type: Gene
SIO_000068: ncbigene

position:685334:-1
position: 685334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691749:-1
position: 691749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685334-691749:-1:exon

LOC114686112
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC114686112
product: uncharacterized LOC114686112
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005092401.1
SIO_010081: LOC114686112
subclass of: SO_0000673
so part of: LOC114686112
location: complement(join(685334..685866,686035..686161,691483..691749))
location: region:685334-691749:-1
so has part: feature:691483-691749:-1:exon
so has part: feature:686035-686161:-1:exon
so has part: feature:685334-685866:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:691483-691749:-1:exon

position:691483:-1
position: 691483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:686035-686161:-1:exon

position:686035:-1
position: 686035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686161:-1
position: 686161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:685334-685866:-1:exon

position:685866:-1
position: 685866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114686111
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114686111
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(703326..717695)
location: region:703326-717695:-1
so has part: feature:703326-717695:-1:exon
subclass of: SO_0000010

114686111
type: Gene
SIO_000068: ncbigene

position:703326:-1
position: 703326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717695:-1
position: 717695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703326-717695:-1:exon

LOC114686111
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114686111
product: zinc finger protein 58-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_028860740.2
SIO_010081: LOC114686111
subclass of: SO_0000673
so part of: LOC114686111
location: complement(join(703326..709939,711608..711703,712170..712296,717564..717695))
location: region:703326-717695:-1
so has part: feature:717564-717695:-1:exon
so has part: feature:712170-712296:-1:exon
so has part: feature:711608-711703:-1:exon
so has part: feature:703326-709939:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:717564-717695:-1:exon

position:717564:-1
position: 717564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:712170-712296:-1:exon

position:712170:-1
position: 712170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712296:-1
position: 712296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:711608-711703:-1:exon

position:711608:-1
position: 711608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711703:-1
position: 711703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:703326-709939:-1:exon

position:709939:-1
position: 709939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114686111
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114686111
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like
translation: MEEMLSFWDVAIDFSPEERECLEPAQWNLYRDVMLENYSHLDFLGLVLSKPHLVTFLEQKQGPMGMKKQVAATVHTGKTDSKGKDYSKAFYCNSLLIQHHTNIQETPYKCEECGKAFRIRSRLSIHQRIHTGEKSYKCEECGKSFNTQSKLSVHQRIHTGEKPYKCEECGKAFSTHSTRYRHRKNHTGEKPYKCKECAKVFSYPSLLKVHQRIHSAEKSYKCEECGKLFYCPLLLKKHQIIHSAEKPYKCAECGKAFHYPSLLKRHQRIHSGKKPYKCKDCDKAFYSSAFLKRHQRIHSEENSYKCEECGRRFYSFPHLQDHQRIHSGEKPYKCEECGKTFSTLSYLPWHKLRHSGEKSYKCEICGKMFYSTLDLKKHKKIHTYKCRECHCAFPNHSALTEHQRVHTGEKPHICEQCGKVFSRLDSLNQHQIVHTGEKPYKCEKCGKSFFRSSSLRRHKGIHS
SIO_010081: LOC114686111
subclass of: SO_0000673
so part of: LOC114686111
location: complement(join(708777..709939,711608..711703,712170..712296,717564..717569))
location: region:708777-717569:-1
so has part: feature:717564-717569:-1:exon
so has part: feature:712170-712296:-1:exon
so has part: feature:711608-711703:-1:exon
so has part: feature:708777-709939:-1:exon

XP_028716573.1
type: Protein
SIO_000068: ncbiprotein

position:708777:-1
position: 708777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717569:-1
position: 717569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717564-717569:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:712170-712296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:711608-711703:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:708777-709939:-1:exon

LOC114686108
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114686108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(730746..742023)
location: region:730746-742023:-1
so has part: feature:730746-742023:-1:exon
subclass of: SO_0000010

114686108
type: Gene
SIO_000068: ncbigene

position:730746:-1
position: 730746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742023:-1
position: 742023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730746-742023:-1:exon

LOC114686108
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114686108
product: zinc finger protein 58-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_028860739.2
SIO_010081: LOC114686108
subclass of: SO_0000673
so part of: LOC114686108
location: complement(join(730746..733141,734945..735040,736747..736873,741868..742023))
location: region:730746-742023:-1
so has part: feature:741868-742023:-1:exon
so has part: feature:736747-736873:-1:exon
so has part: feature:734945-735040:-1:exon
so has part: feature:730746-733141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:741868-742023:-1:exon

position:741868:-1
position: 741868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:736747-736873:-1:exon

position:736747:-1
position: 736747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736873:-1
position: 736873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:734945-735040:-1:exon

position:734945:-1
position: 734945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735040:-1
position: 735040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:730746-733141:-1:exon

position:733141:-1
position: 733141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114686108
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114686108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like
translation: MEEMLSFRDVAIDFSAEEWECLDLAQWNLYRDVMLENYSNLVFLGLASCKPYLVTFLEQRQGPSDVKRQAAAPVHPGGTPYKCQEFDKAFDWNSLLIQHQRIHPVEKPYKCEECGKVFSAHSALSIHQRIHTGEKPYKCEECGKAFSTRSALYIHKKIHSGEKPYKCEECAKAFYFPSLLKQHQRTHSAENLCKCEECGKAFYLPSFLKQHQRIHSAENPYRCEECGKAFSYPSTLKQHQRIHSGEKPYRCEECGKAFRRSTYFHQHQRIHTGEKPYQCEECGKTFYYRSNLKGHQIIHSGVKPYKCEVCGSTFRTSSDLSKHQRIHAEVKLYSCEECGKAFSTHSYLIRHKLGHSREKPYKCEECGKTFCYPSILKEHQRIHSGVKPYSCEICGSMFRTRSELSKHQRIHAEVKLYNCEECGKAFSTHSYLMRHRLGHSGEKPYKCEECGKSYSYPSLLKEHQRIHSQNPYKCEVCGKVFCTRSGRSKHQRIHSGEKPYKCEECGKAFSTHSYLTLHKLLHNEEKPYKWEECGEVFYSC
SIO_010081: LOC114686108
subclass of: SO_0000673
so part of: LOC114686108
location: complement(join(731748..733141,734945..735040,736747..736873,741868..741873))
location: region:731748-741873:-1
so has part: feature:741868-741873:-1:exon
so has part: feature:736747-736873:-1:exon
so has part: feature:734945-735040:-1:exon
so has part: feature:731748-733141:-1:exon

XP_028716572.1
type: Protein
SIO_000068: ncbiprotein

position:731748:-1
position: 731748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741873:-1
position: 741873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741868-741873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736747-736873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:734945-735040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731748-733141:-1:exon

LOC114686107
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114686107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(754500..767946)
location: region:754500-767946:-1
so has part: feature:754500-767946:-1:exon
subclass of: SO_0000010

114686107
type: Gene
SIO_000068: ncbigene

position:754500:-1
position: 754500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767946:-1
position: 767946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754500-767946:-1:exon

LOC114686107
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114686107
product: zinc finger protein 708-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_028860738.2
SIO_010081: LOC114686107
subclass of: SO_0000673
so part of: LOC114686107
location: complement(join(754500..758554,760034..760126,760771..760897,767780..767946))
location: region:754500-767946:-1
so has part: feature:767780-767946:-1:exon
so has part: feature:760771-760897:-1:exon
so has part: feature:760034-760126:-1:exon
so has part: feature:754500-758554:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:767780-767946:-1:exon

position:767780:-1
position: 767780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:760771-760897:-1:exon

position:760771:-1
position: 760771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760897:-1
position: 760897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:760034-760126:-1:exon

position:760034:-1
position: 760034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760126:-1
position: 760126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:754500-758554:-1:exon

position:758554:-1
position: 758554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114686107
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114686107
product: zinc finger protein 708-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_028860737.2
SIO_010081: LOC114686107
subclass of: SO_0000673
so part of: LOC114686107
location: complement(join(754500..758554,760034..760126,760771..760897,767750..767946))
location: region:754500-767946:-1
so has part: feature:767750-767946:-1:exon
so has part: feature:760771-760897:-1:exon
so has part: feature:760034-760126:-1:exon
so has part: feature:754500-758554:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:767750-767946:-1:exon

position:767750:-1
position: 767750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:760771-760897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760034-760126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:754500-758554:-1:exon

LOC114686107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114686107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 708-like isoform X2
translation: MEEMLSFRDVAIDFSAEEWECLGPAQWSLYKDVMLENYSNLVFLGLAFSKPYLVTFLEQRQEPSDVKRQAAAIQTDIKPYKCKECGKACDWDSLLEYQRIHPGEKAYKCEECGKASDSCSVLSEHQIIDMGEKAYKCEECGKAICTCSGHSSYQRICIGENPYKCEECGKAFPTYSCLTEHEVEHTEQKFYSCEECGKLFYCQSHLTEHQRVHFQENSFKIEVCSEDFCSPIELSDDQRFCIEEKPYKYEECVKAFSACSMLSDHPGIHPGEKAYKCEECGNAFCALHSVSKQLKIDCEVKSYKCEECGKAFPSHLSLIQHKIGHTREKPYQCEECGKMFYCSSNLKQHQITHSQEKPYKCEVCGKVFRTCWQLSKHLRIHSGEKPYKCEECGKAFYTLSYLTHHKLGHTGEKPYKCEECGKTFYYPSVLKEHQAIHSGEKPYRCEECGKDFCTRSGRSRHQRIHTGEKPYKCEQCGKAFSTHSYLSHHKIVHTGHKPYKCEECGKKFYYPSRLKEHQRIHSQENPYKCEICGKAFYTHSYFTQHKLGHTGEKPYKCEECGKTFYYPSILREHQAIHSGKKPYRCEECGKDFCTRSGRSRHQRIHTGEKPHKCEECGKVFSTHSYLTQHKVVHSGEKPYKCEECGKKFYYPSRLKEHQRIHSQENPYKCDICGKAFYTHSYLTQHKLGHTGEKPYKCEECGKTFYYPSILREHQAIHSGKKPYRCEECGKDFCTRSGRSRHQRIHTGEKPYKCEQCGKAFSTHSYLSQHKVVHSGEKPYKCEECGKMFYYPSRLKEHQRIHSQENSYKCEVCGSVFSAPLELATHLNIHSAGV
SIO_010081: LOC114686107
subclass of: SO_0000673
so part of: LOC114686107
location: complement(join(756279..758554,760034..760126,760771..760897,767780..767785))
location: region:756279-767785:-1
so has part: feature:767780-767785:-1:exon
so has part: feature:760771-760897:-1:exon
so has part: feature:760034-760126:-1:exon
so has part: feature:756279-758554:-1:exon

XP_028716571.1
type: Protein
SIO_000068: ncbiprotein

position:756279:-1
position: 756279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767785:-1
position: 767785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:767780-767785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:760771-760897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760034-760126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:756279-758554:-1:exon

LOC114686107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114686107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 708-like isoform X1
translation: MEVGPGCRASLQEMLSFRDVAIDFSAEEWECLGPAQWSLYKDVMLENYSNLVFLGLAFSKPYLVTFLEQRQEPSDVKRQAAAIQTDIKPYKCKECGKACDWDSLLEYQRIHPGEKAYKCEECGKASDSCSVLSEHQIIDMGEKAYKCEECGKAICTCSGHSSYQRICIGENPYKCEECGKAFPTYSCLTEHEVEHTEQKFYSCEECGKLFYCQSHLTEHQRVHFQENSFKIEVCSEDFCSPIELSDDQRFCIEEKPYKYEECVKAFSACSMLSDHPGIHPGEKAYKCEECGNAFCALHSVSKQLKIDCEVKSYKCEECGKAFPSHLSLIQHKIGHTREKPYQCEECGKMFYCSSNLKQHQITHSQEKPYKCEVCGKVFRTCWQLSKHLRIHSGEKPYKCEECGKAFYTLSYLTHHKLGHTGEKPYKCEECGKTFYYPSVLKEHQAIHSGEKPYRCEECGKDFCTRSGRSRHQRIHTGEKPYKCEQCGKAFSTHSYLSHHKIVHTGHKPYKCEECGKKFYYPSRLKEHQRIHSQENPYKCEICGKAFYTHSYFTQHKLGHTGEKPYKCEECGKTFYYPSILREHQAIHSGKKPYRCEECGKDFCTRSGRSRHQRIHTGEKPHKCEECGKVFSTHSYLTQHKVVHSGEKPYKCEECGKKFYYPSRLKEHQRIHSQENPYKCDICGKAFYTHSYLTQHKLGHTGEKPYKCEECGKTFYYPSILREHQAIHSGKKPYRCEECGKDFCTRSGRSRHQRIHTGEKPYKCEQCGKAFSTHSYLSQHKVVHSGEKPYKCEECGKMFYYPSRLKEHQRIHSQENSYKCEVCGSVFSAPLELATHLNIHSAGV
SIO_010081: LOC114686107
subclass of: SO_0000673
so part of: LOC114686107
location: complement(join(756279..758554,760034..760126,760771..760897,767750..767785))
location: region:756279-767785:-1
so has part: feature:767750-767785:-1:exon
so has part: feature:760771-760897:-1:exon
so has part: feature:760034-760126:-1:exon
so has part: feature:756279-758554:-1:exon

XP_028716570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:767750-767785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:760771-760897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760034-760126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:756279-758554:-1:exon

LOC114686115
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114686115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(792796..839170)
location: region:792796-839170:-1
so has part: feature:792796-839170:-1:exon
subclass of: SO_0000010

114686115
type: Gene
SIO_000068: ncbigene

position:792796:-1
position: 792796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839170:-1
position: 839170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:792796-839170:-1:exon

LOC114686115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114686115
product: zinc finger protein 728-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 104 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037209577.1
SIO_010081: LOC114686115
subclass of: SO_0000673
so part of: LOC114686115
location: complement(join(792796..796912,797746..797841,798331..798457,812805..812963,813977..814123,827933..829023,829879..829974,830362..830488,839043..839170))
location: region:792796-839170:-1
so has part: feature:839043-839170:-1:exon
so has part: feature:830362-830488:-1:exon
so has part: feature:829879-829974:-1:exon
so has part: feature:827933-829023:-1:exon
so has part: feature:813977-814123:-1:exon
so has part: feature:812805-812963:-1:exon
so has part: feature:798331-798457:-1:exon
so has part: feature:797746-797841:-1:exon
so has part: feature:792796-796912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:839043-839170:-1:exon

position:839043:-1
position: 839043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:830362-830488:-1:exon

position:830362:-1
position: 830362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830488:-1
position: 830488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:829879-829974:-1:exon

position:829879:-1
position: 829879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829974:-1
position: 829974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:827933-829023:-1:exon

position:827933:-1
position: 827933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829023:-1
position: 829023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:813977-814123:-1:exon

position:813977:-1
position: 813977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814123:-1
position: 814123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:812805-812963:-1:exon

position:812805:-1
position: 812805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812963:-1
position: 812963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:798331-798457:-1:exon

position:798331:-1
position: 798331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798457:-1
position: 798457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:797746-797841:-1:exon

position:797746:-1
position: 797746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797841:-1
position: 797841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:792796-796912:-1:exon

position:796912:-1
position: 796912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114686115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114686115
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(795231..795233),aa:OTHER)
product: LOW QUALITY PROTEIN: zinc finger protein 728-like
translation: MEDVLSFWDVAIYFSAEEWECLGPAQWNLYRDVIVENYNNLVFLGLASSKPYLVTFLEQKQEPSDVKRQAAATVHPGKEQYTDKECDKTFHWNSQLTNNQRIHLRMKPYKCEECGKSFCFPSLLSIHKRIHTGEKPFKCEVCGKAFHSPSLFSVHKRIHTGEKRYKCEICNKAFHCPSLLSVHKNIHTGEKPYTCEVCGKAFHCPSVLSRHKRLHTGGKPYKCEVCDKAFHCPSVLSDHKNIHTGEKPYKCEVCGKAFHAPPLLSAHKRIHTGEKPYKCEVCGKAFHTPSLRSVHKRIHTGKKAYKCEVCSEVFSTSWQISSHLVIHSGEKPYKCEHCGKAFSTKSYLTKHKLLHKMEKLYRCEECGKQLNSSRSLQEHQRIHSGEKPYKCKECGKDFRTYTARSRHRTVHIGEKCYKCGECGKTFYQSSGLKQHQRNHLDGPGVGAHSSVIPGAAPLPLGEVQRRKVFAQRTPGGEYMPEFVKARDNWSFALTCGKCSSDHDDITRRVLGYRTSASVFKLSFSPKLGECPAQHWACISDMEDILSFWDVVIYFSAEEWDCLGPAQWKLYRDVMLENYNNLVFLGLASCKPYLVTFLEQRQETYGVRRQAADAMQAGEKCYTCKECGKAFDWKSKFSKHQRIHLRLKPYKCEECHKAFRVPSLLKEHKRIHTGEKPYTCELCAKAFHGPSLLNKHKRIHTREKPFKCQVNGKAFHFSSVLSEHKKSYTGQKPYKCEVCDKAFRFPSLLSEHKRIHTGEKPYKCETCNKAFHAPSLLSVHKRIHTGEKPYKCEECGKAFRVPSLLSKHKVIHTGEKPYKCEVCGKAFRALSLLSVHKKIHTGVKPYTCEVCGKAFHYPSILSKHKRIHTGEKPYKCEVCGNAFRFPSLLSVHKRIHTGEKPYRCEVCGKEFHCPSLLSKHKRIHTGVKPYKCEVCGKAFRAPSVLSVHMRIHTGEKPYKCEVCAKAFRCPSLLSKHKRIHTGEKLYKCELCGKAFHCPSLLSKHKRIHTGEKHHKCKVCGLAFHCPSSLSEHKRIHTGEKPYKCDVCGEAFRTSRILSTHLITHSGEKPYKCEKCGKAFSTKSYLCQHKFTHNVENPYKCKECGKVLNNTKNFKDHQRIHSGEKPYRCKECGKDFRSSTARSKHRIIHTGEKRYKCEECGKSYYQSSGLKQHRKIHLXQKLHKSEECA
SIO_010081: LOC114686115
subclass of: SO_0000673
so part of: LOC114686115
location: complement(join(795198..796912,797746..797841,798331..798457,812805..812963,813977..814123,827933..829023,829879..829974,830362..830488,839043..839048))
location: region:795198-839048:-1
so has part: feature:839043-839048:-1:exon
so has part: feature:830362-830488:-1:exon
so has part: feature:829879-829974:-1:exon
so has part: feature:827933-829023:-1:exon
so has part: feature:813977-814123:-1:exon
so has part: feature:812805-812963:-1:exon
so has part: feature:798331-798457:-1:exon
so has part: feature:797746-797841:-1:exon
so has part: feature:795198-796912:-1:exon

XP_037065472.1
type: Protein
SIO_000068: ncbiprotein

position:795198:-1
position: 795198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839048:-1
position: 839048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:839043-839048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830362-830488:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:829879-829974:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827933-829023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:813977-814123:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:812805-812963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:798331-798457:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:797746-797841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:795198-796912:-1:exon

LOC114686114
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114686114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(845598..849710)
location: region:845598-849710:-1
so has part: feature:845598-849710:-1:exon
subclass of: SO_0000010

114686114
type: Gene
SIO_000068: ncbigene

position:845598:-1
position: 845598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849710:-1
position: 849710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:845598-849710:-1:exon

LOC114686114
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114686114
product: zinc finger protein 724-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037209578.1
SIO_010081: LOC114686114
subclass of: SO_0000673
so part of: LOC114686114
location: complement(join(845598..845668,848980..849710))
location: region:845598-849710:-1
so has part: feature:848980-849710:-1:exon
so has part: feature:845598-845668:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:848980-849710:-1:exon

position:848980:-1
position: 848980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:845598-845668:-1:exon

position:845668:-1
position: 845668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114686114
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114686114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 724-like
translation: MKPYKCEECGKAFHFPSLLCIHKRIHTGEKPFKCEVCVKAFYVPSQLSVYKRIHTGEKPFKCEICGKAFHTPSLLSIHKRIHTGEEPYKCEECGKAFTRPSGRSKHMTIHTGERSYKCGICGKAFCFPSLLSEHKTIHTEEKPYKCGICGKVCKTSRILSAHLIIHSGKKTYKCEECRKAFYKKSYLGWRDVSAVKSTTCSRNDWEKPLRTVANERLQESLMFS
SIO_010081: LOC114686114
subclass of: SO_0000673
so part of: LOC114686114
location: complement(join(845598..845668,848980..849583))
location: region:845598-849583:-1
so has part: feature:848980-849583:-1:exon
so has part: feature:845598-845668:-1:exon

XP_037065473.1
type: Protein
SIO_000068: ncbiprotein

position:849583:-1
position: 849583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:848980-849583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845598-845668:-1:exon

LOC114686109
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114686109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(876877..888753)
location: region:876877-888753:-1
so has part: feature:876877-888753:-1:exon
subclass of: SO_0000010

114686109
type: Gene
SIO_000068: ncbigene

position:876877:-1
position: 876877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888753:-1
position: 888753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:876877-888753:-1:exon

LOC114686109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114686109
product: zinc finger protein 728-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_037209369.1
SIO_010081: LOC114686109
subclass of: SO_0000673
so part of: LOC114686109
location: complement(join(876877..879229,880105..880200,880715..880841,888630..888753))
location: region:876877-888753:-1
so has part: feature:888630-888753:-1:exon
so has part: feature:880715-880841:-1:exon
so has part: feature:880105-880200:-1:exon
so has part: feature:876877-879229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:888630-888753:-1:exon

position:888630:-1
position: 888630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:880715-880841:-1:exon

position:880715:-1
position: 880715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880841:-1
position: 880841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:880105-880200:-1:exon

position:880105:-1
position: 880105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880200:-1
position: 880200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:876877-879229:-1:exon

position:879229:-1
position: 879229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114686109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114686109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 728-like
translation: MEDMLSFWDVAIYFSAEEWECLGPAQWNLYRDVMLENFSNLVFLGLTSCKPYLVTFLEQRQEPSDVRRQEAAATQAGKKCYTCTDCGKAFDWNSRLIKHQRIHSRVKPYKCEACGKAFSTPSVLSVHLRIHTEEKSYKCEECGKMYYYSSKLKEHQKSHSQEKPYRCEVCGKAFRSSSHLSTHLGIHSGEKPFKCEVCSKVFRTPWQLSSHVRVHSGEKPYKCEECGKAFSTQSYLSQHKLAHTGEKPYKCEECGKLFYCAKNLKEHQRIHSGEKPFKCKECGKDFRTYTARSKHQRIHTGEKRYKCGECGKAFHQSSGLKQHQRIHL
SIO_010081: LOC114686109
subclass of: SO_0000673
so part of: LOC114686109
location: complement(join(878472..879229,880105..880200,880715..880841,888630..888635))
location: region:878472-888635:-1
so has part: feature:888630-888635:-1:exon
so has part: feature:880715-880841:-1:exon
so has part: feature:880105-880200:-1:exon
so has part: feature:878472-879229:-1:exon

XP_037065264.1
type: Protein
SIO_000068: ncbiprotein

position:878472:-1
position: 878472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888635:-1
position: 888635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:888630-888635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880715-880841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:880105-880200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:878472-879229:-1:exon

LOC119088705
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119088705
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 903873..915235
location: region:903873-915235:1
so has part: feature:903873-915235:1:exon
subclass of: SO_0000010

119088705
type: Gene
SIO_000068: ncbigene

position:903873:1
position: 903873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915235:1
position: 915235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903873-915235:1:exon

LOC119088705
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC119088705
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_037209368.1
SIO_010081: LOC119088705
subclass of: SO_0000673
so part of: LOC119088705
location: join(903873..905025,908256..908382,909234..909320,912814..915235)
location: region:903873-915235:1
so has part: feature:903873-905025:1:exon
so has part: feature:908256-908382:1:exon
so has part: feature:909234-909320:1:exon
so has part: feature:912814-915235:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:903873-905025:1:exon

position:905025:1
position: 905025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:908256-908382:1:exon

position:908256:1
position: 908256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908382:1
position: 908382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:909234-909320:1:exon

position:909234:1
position: 909234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909320:1
position: 909320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:912814-915235:1:exon

position:912814:1
position: 912814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119088705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC119088705
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MQNMLSFKDVAINFSAEEYECLDSAQWNLYRDVMLENYSNLVFLGLSFSKPLLVRFLEKNQELRKSQAAAVRQGKKPYKCKECGKAFAKNSFLTYHLRIHTGEKPYKCDKCGKAFSKLFILTNHQKVHTGEKPYKCEVCGKAFTVLSTLINHRSVHTGEKPYKCDVCGKAFSLASTLINHQKIHTGEKPYECEVCGKKFSSPADFKKHQRVHTGEKPYKCKECEKPFSSLSDLSKHKVVHTGEKRYICEKCGKAYSRRHHLNRHKQAHTGQKSYKCTECGKMFYYASGLKRHQRIHSEERPYECEECGKSFPCPSDVTQHARTHKRLKQYTCEKCGECFTIQTTFSNLRKIRLEGKPSECERCRKSF
SIO_010081: LOC119088705
subclass of: SO_0000673
so part of: LOC119088705
location: join(905020..905025,908256..908382,909234..909320,912814..913697)
location: region:905020-913697:1
so has part: feature:905020-905025:1:exon
so has part: feature:908256-908382:1:exon
so has part: feature:909234-909320:1:exon
so has part: feature:912814-913697:1:exon

XP_037065263.1
type: Protein
SIO_000068: ncbiprotein

position:905020:1
position: 905020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913697:1
position: 913697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:905020-905025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:908256-908382:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:909234-909320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912814-913697:1:exon

LOC114686113
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114686113
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 909253..937748
location: region:909253-937748:1
so has part: feature:909253-937748:1:exon

114686113
type: Gene
SIO_000068: ncbigene

position:909253:1
position: 909253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937748:1
position: 937748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:909253-937748:1:exon

LOC114686113
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114686113
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC114686113
subclass of: SO_0000673
so part of: LOC114686113
location: 909253..909320
location: region:909253-909320:1
so has part: feature:909253-909320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:909253-909320:1:exon

LOC114686113
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114686113
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC114686113
subclass of: SO_0000673
so part of: LOC114686113
location: 931506..931632
location: region:931506-931632:1
so has part: feature:931506-931632:1:exon

position:931506:1
position: 931506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931632:1
position: 931632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931506-931632:1:exon

LOC114686113
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114686113
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC114686113
subclass of: SO_0000673
so part of: LOC114686113
location: 932912..933007
location: region:932912-933007:1
so has part: feature:932912-933007:1:exon

position:932912:1
position: 932912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933007:1
position: 933007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932912-933007:1:exon

LOC114686113
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114686113
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC114686113
subclass of: SO_0000673
so part of: LOC114686113
location: 935047..937748
location: region:935047-937748:1
so has part: feature:935047-937748:1:exon

position:935047:1
position: 935047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:935047-937748:1:exon

LOC114686116
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114686116
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 942455..964380
location: region:942455-964380:1
so has part: feature:942455-964380:1:exon
subclass of: SO_0000010

114686116
type: Gene
SIO_000068: ncbigene

position:942455:1
position: 942455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964380:1
position: 964380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:942455-964380:1:exon

LOC114686116
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114686116
product: zinc finger protein 420-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_028860747.2
SIO_010081: LOC114686116
subclass of: SO_0000673
so part of: LOC114686116
location: join(942455..942606,952385..952511,955527..955622,958312..960946)
location: region:942455-960946:1
so has part: feature:942455-942606:1:exon
so has part: feature:952385-952511:1:exon
so has part: feature:955527-955622:1:exon
so has part: feature:958312-960946:1:exon

position:960946:1
position: 960946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:942455-942606:1:exon

position:942606:1
position: 942606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:952385-952511:1:exon

position:952385:1
position: 952385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952511:1
position: 952511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:955527-955622:1:exon

position:955527:1
position: 955527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955622:1
position: 955622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:958312-960946:1:exon

position:958312:1
position: 958312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114686116
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 10041
gene: LOC114686116
product: zinc finger protein 420-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XR_003733531.2
SIO_010081: LOC114686116
so part of: LOC114686116
location: join(942476..942606,952385..952511,955527..955622,958312..960540,962954..964380)
location: region:942476-964380:1
so has part: feature:942476-942606:1:exon
so has part: feature:952385-952511:1:exon
so has part: feature:955527-955622:1:exon
so has part: feature:958312-960540:1:exon
so has part: feature:962954-964380:1:exon

position:942476:1
position: 942476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:942476-942606:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952385-952511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:955527-955622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958312-960540:1:exon

position:960540:1
position: 960540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:962954-964380:1:exon

position:962954:1
position: 962954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114686116
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114686116
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 420-like
translation: MEGLLSFRDVAIDFSAEECECLDLAQWNLYRDVMLENYSNLVFLGLAFSKPYLVTFLEQRKEPWNVKGPAPVAVYPEIKPYKFKECGKTFPWNSLLIQHHKTHAGEKLYKCGECGKAFNVRSTLYKHQRIHTGEKPYKCKECGKGFTCSSSLNQHHRIHTGEKPYKCQCGKAFNNSSALTQHQRIHTGERPYKCEECGKAFNNCSARTRHQRIHTGERPYRCAACGKTFNFPTSLSQHQRIHTGEKPYKCEECGKAFNCSSHLKQHRIIHTGKKPYKCKECDKAFNCSSSLNQHRRIHTGEKRYICEECGKAFNNCSALTQHQRIHSGEKPFKCEECGKAFYNCSALSRHHKIHTGEKPFKCADCGKAFIFRSSLSQHQRIHTGEKPYKCKECGKAFNCSSHLNQHGRIHSGEKPYKCEECGQTFICSSYLHKHQKIHTIEKLYECKECGKTFSCSSYLKYHQRFHTGGKSYTCKECDKTFRSSSYLRNHQRFHTGEKPYTCKDCGKAFVNSSSLLVHQRIHTGEKPYKCKDCGKAFRCSSYFKYHQRLHTGEKPYTCKECGKAFAKSSCLILHQRIHTGEKPYKCAECGQAFICSSYLRKHQRIHTGEKPYTCEECGKAFSIYSTFIQHQRIHTGEKPYKCKECDKAFNNHSALIKHQRIHTGEKPYTCKECNKAFNNSSSLIRHQRIHTGIETLDVQGMWQGL
SIO_010081: LOC114686116
subclass of: SO_0000673
so part of: LOC114686116
location: join(942601..942606,952385..952511,955527..955622,958312..960200)
location: region:942601-960200:1
so has part: feature:942601-942606:1:exon
so has part: feature:952385-952511:1:exon
so has part: feature:955527-955622:1:exon
so has part: feature:958312-960200:1:exon

XP_028716580.1
type: Protein
SIO_000068: ncbiprotein

position:942601:1
position: 942601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960200:1
position: 960200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:942601-942606:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952385-952511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:955527-955622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958312-960200:1:exon

Sema5a
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Sema5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1314823..1781197)
location: region:1314823-1781197:-1
so has part: feature:1314823-1781197:-1:exon
subclass of: SO_0000010

114701844
type: Gene
SIO_000068: ncbigene

position:1314823:-1
position: 1314823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1781197:-1
position: 1781197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1314823-1781197:-1:exon

Sema5a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Sema5a
product: semaphorin 5A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_037209370.1
SIO_010081: Sema5a
subclass of: SO_0000673
so part of: Sema5a
location: complement(join(1314823..1317310,1320049..1320260,1324349..1324396,1325707..1325862,1327609..1327779,1334545..1334763,1337996..1338221,1368991..1369138,1379428..1379571,1383396..1383577,1394723..1394840,1405803..1406010,1435920..1436124,1441793..1441928,1445158..1445443,1457626..1457839,1459892..1459990,1471223..1471285,1541503..1541548,1562417..1562516,1607976..1608172,1674928..1675024,1780681..1781197))
location: region:1314823-1781197:-1
so has part: feature:1780681-1781197:-1:exon
so has part: feature:1674928-1675024:-1:exon
so has part: feature:1607976-1608172:-1:exon
so has part: feature:1562417-1562516:-1:exon
so has part: feature:1541503-1541548:-1:exon
so has part: feature:1471223-1471285:-1:exon
so has part: feature:1459892-1459990:-1:exon
so has part: feature:1457626-1457839:-1:exon
so has part: feature:1445158-1445443:-1:exon
so has part: feature:1441793-1441928:-1:exon
so has part: feature:1435920-1436124:-1:exon
so has part: feature:1405803-1406010:-1:exon
so has part: feature:1394723-1394840:-1:exon
so has part: feature:1383396-1383577:-1:exon
so has part: feature:1379428-1379571:-1:exon
so has part: feature:1368991-1369138:-1:exon
so has part: feature:1337996-1338221:-1:exon
so has part: feature:1334545-1334763:-1:exon
so has part: feature:1327609-1327779:-1:exon
so has part: feature:1325707-1325862:-1:exon
so has part: feature:1324349-1324396:-1:exon
so has part: feature:1320049-1320260:-1:exon
so has part: feature:1314823-1317310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1780681-1781197:-1:exon

position:1780681:-1
position: 1780681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1674928-1675024:-1:exon

position:1674928:-1
position: 1674928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1675024:-1
position: 1675024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1607976-1608172:-1:exon

position:1607976:-1
position: 1607976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608172:-1
position: 1608172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1562417-1562516:-1:exon

position:1562417:-1
position: 1562417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1562516:-1
position: 1562516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1541503-1541548:-1:exon

position:1541503:-1
position: 1541503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1541548:-1
position: 1541548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1471223-1471285:-1:exon

position:1471223:-1
position: 1471223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1471285:-1
position: 1471285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1459892-1459990:-1:exon

position:1459892:-1
position: 1459892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1459990:-1
position: 1459990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1457626-1457839:-1:exon

position:1457626:-1
position: 1457626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1457839:-1
position: 1457839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1445158-1445443:-1:exon

position:1445158:-1
position: 1445158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445443:-1
position: 1445443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1441793-1441928:-1:exon

position:1441793:-1
position: 1441793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441928:-1
position: 1441928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1435920-1436124:-1:exon

position:1435920:-1
position: 1435920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1436124:-1
position: 1436124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1405803-1406010:-1:exon

position:1405803:-1
position: 1405803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1406010:-1
position: 1406010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1394723-1394840:-1:exon

position:1394723:-1
position: 1394723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394840:-1
position: 1394840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1383396-1383577:-1:exon

position:1383396:-1
position: 1383396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383577:-1
position: 1383577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1379428-1379571:-1:exon

position:1379428:-1
position: 1379428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379571:-1
position: 1379571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1368991-1369138:-1:exon

position:1368991:-1
position: 1368991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1369138:-1
position: 1369138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1337996-1338221:-1:exon

position:1337996:-1
position: 1337996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338221:-1
position: 1338221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1334545-1334763:-1:exon

position:1334545:-1
position: 1334545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1334763:-1
position: 1334763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1327609-1327779:-1:exon

position:1327609:-1
position: 1327609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327779:-1
position: 1327779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1325707-1325862:-1:exon

position:1325707:-1
position: 1325707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325862:-1
position: 1325862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1324349-1324396:-1:exon

position:1324349:-1
position: 1324349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324396:-1
position: 1324396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1320049-1320260:-1:exon

position:1320049:-1
position: 1320049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320260:-1
position: 1320260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1314823-1317310:-1:exon

position:1317310:-1
position: 1317310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Sema5a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Sema5a
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: semaphorin-5A
translation: MKGACILAWLFSSLGVWRLXRPEFQEPAQCQRAEHPVFSYKEIGPWLREFRAENAVDFSRLTFDPGQKELVVGARNYLFRLQLEDLSLIQAVEWECDEATKKACYSKGKSKEECQNYIRVLLVGGDRLFTCGTNAFTPVCTIRSLSNLTEIHDQISGMARCPYSPQHNSTALLTASGELYAATAMDFPGRDPAIYRSLGTLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEHDCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQGTFFLPELDLIYGIFTTNVNSIAASAVCVFNLSAISQAFNGPFKYQENSRSAWLPYPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFILMHEVVQPVTTVPSFMEDNSRFSHVAVDVVQGRDTLVHIIYLATDYGTIKKVRAPMSQASGSCLLEEIELFPERRREPIRSLQILHSQSVLFVGLQEHVAKIPLKRCPFHQTRSACIGAQDPYCGWDVVMKKCTSLEESLSMTQWEQSISTCPTRNLTVDGSFGPWSPWTSCTHTDGTAVGSCLCRSRSCDSPAPQCGGWQCEGPRMEITNCSRNGGWTPWTSWSLCSTTCGIGFQVRQRSCSNPTPRHGGRVCVGQNREERYCNEHLLCPPHVFWTGWGPWERCTAQCGGGIQARRRTCENGPDCAGCNVEYQPCNTNACPELKKTTPWTPWTPVNISDNGGHYEQRFRYTCKARLPDPNLLEVGRQRIEMRYCSSDGTSGCSTDGLSGDFLRAGRYSAHTVNGAWSAWTSWSQCSRDCSRGIRNRKRVCNNPEPKYGGMPCLGPSLEFQECNILPCPVDGMWSCWSSWSKCSATCGGGHYMRTRSCTNPAPAYGGDICLGLHTEEALCNTQTCPESWSLWSDWSVCDASGIQVRARQCILLFPVGSQCSGNTTESRPCVFDSNFIPEVSVARSSSVEEKRCGEFNMFHMMAVGLSSSILGCLLTLLVYTYCQRYQQQSHDATVIHPVSPAALNSSITNHINKLDKYDSVEAIKAFNKNNLILEERNKYFNPHLTGKTYSNAYFTDLNNYDEY
SIO_010081: Sema5a
subclass of: SO_0000673
so part of: Sema5a
location: complement(join(1317191..1317310,1320049..1320260,1324349..1324396,1325707..1325862,1327609..1327779,1334545..1334763,1337996..1338221,1368991..1369138,1379428..1379571,1383396..1383577,1394723..1394840,1405803..1406010,1435920..1436124,1441793..1441928,1445158..1445443,1457626..1457839,1459892..1459990,1471223..1471285,1541503..1541548,1562417..1562516,1607976..1608098))
location: region:1317191-1608098:-1
so has part: feature:1607976-1608098:-1:exon
so has part: feature:1562417-1562516:-1:exon
so has part: feature:1541503-1541548:-1:exon
so has part: feature:1471223-1471285:-1:exon
so has part: feature:1459892-1459990:-1:exon
so has part: feature:1457626-1457839:-1:exon
so has part: feature:1445158-1445443:-1:exon
so has part: feature:1441793-1441928:-1:exon
so has part: feature:1435920-1436124:-1:exon
so has part: feature:1405803-1406010:-1:exon
so has part: feature:1394723-1394840:-1:exon
so has part: feature:1383396-1383577:-1:exon
so has part: feature:1379428-1379571:-1:exon
so has part: feature:1368991-1369138:-1:exon
so has part: feature:1337996-1338221:-1:exon
so has part: feature:1334545-1334763:-1:exon
so has part: feature:1327609-1327779:-1:exon
so has part: feature:1325707-1325862:-1:exon
so has part: feature:1324349-1324396:-1:exon
so has part: feature:1320049-1320260:-1:exon
so has part: feature:1317191-1317310:-1:exon

XP_037065265.1
type: Protein
SIO_000068: ncbiprotein

position:1317191:-1
position: 1317191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608098:-1
position: 1608098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1607976-1608098:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1562417-1562516:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1541503-1541548:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1471223-1471285:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1459892-1459990:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1457626-1457839:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1445158-1445443:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1441793-1441928:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1435920-1436124:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405803-1406010:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1394723-1394840:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1383396-1383577:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1379428-1379571:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1368991-1369138:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1337996-1338221:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1334545-1334763:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1327609-1327779:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1325707-1325862:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1324349-1324396:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1320049-1320260:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1317191-1317310:-1:exon

LOC114701849
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114701849
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1783860..1783929
location: region:1783860-1783929:1
so has part: feature:1783860-1783929:1:exon
subclass of: SO_0000578

114701849
type: Gene
SIO_000068: ncbigene

position:1783860:1
position: 1783860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1783929:1
position: 1783929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1783860-1783929:1:exon

LOC114701849
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: snoRNA
gene: LOC114701849
product: small nucleolar RNA SNORD123
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01156
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003735886.1
SIO_010081: LOC114701849
subclass of: SO_0000673
so part of: LOC114701849
location: 1783860..1783929
location: region:1783860-1783929:1
so has part: feature:1783860-1783929:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1783860-1783929:1:exon

Tas2r1
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Tas2r1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1849000..1849923)
location: region:1849000-1849923:-1
so has part: feature:1849000-1849923:-1:exon
subclass of: SO_0000010

114701832
type: Gene
SIO_000068: ncbigene

position:1849000:-1
position: 1849000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1849923:-1
position: 1849923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1849000-1849923:-1:exon

Tas2r1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Tas2r1
product: taste 2 receptor member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_028882029.1
SIO_010081: Tas2r1
subclass of: SO_0000673
so part of: Tas2r1
location: complement(1849000..1849923)
location: region:1849000-1849923:-1
so has part: feature:1849000-1849923:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1849000-1849923:-1:exon

Tas2r1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Tas2r1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: taste receptor type 2 member 1
translation: MLEGYTLFLFLVMMVQLFTGVLANGLIVVVNATDLITRRKMSPLGLLLSCLATSRLILQLCILFAQLGLFCLAKPLLFADNIAFVFFINELSLWFATWLCVFYCAKIATVSHPLFLWLKMRISRLVPWLILGSVLYATVTVMIYGRETSTIPKQIYASFFSENATQVLKLHNMTLSILILGLTLPSLIFIVAVLLLIFSLWKHSWKMRTVVGTREPSRYAHISVMLSFLSFFILYFSHYMVVLVISTQGFQLGSTDFLYCTLLVGMYPSLHSVVLILGNPKLRQNAKMFIVHCKHCHCVRAEIPSRK
SIO_010081: Tas2r1
subclass of: SO_0000673
so part of: Tas2r1
location: complement(1849000..1849923)
location: region:1849000-1849923:-1
so has part: feature:1849000-1849923:-1:exon

XP_028737862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1849000-1849923:-1:exon

LOC114701830
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114701830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2068454..2068818)
location: region:2068454-2068818:-1
so has part: feature:2068454-2068818:-1:exon

114701830
type: Gene
SIO_000068: ncbigene

position:2068454:-1
position: 2068454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2068818:-1
position: 2068818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2068454-2068818:-1:exon

LOC114701830
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114701830
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 28% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114701830
subclass of: SO_0000673
so part of: LOC114701830
location: complement(2068454..2068818)
location: region:2068454-2068818:-1
so has part: feature:2068454-2068818:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2068454-2068818:-1:exon

Atpsckmt
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Atpsckmt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2371154..2392631)
location: region:2371154-2392631:-1
so has part: feature:2371154-2392631:-1:exon
subclass of: SO_0000010

114701831
type: Gene
SIO_000068: ncbigene

position:2371154:-1
position: 2371154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392631:-1
position: 2392631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2371154-2392631:-1:exon

Atpsckmt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Atpsckmt
product: ATP synthase c subunit lysine N-methyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_028882028.2
SIO_010081: Atpsckmt
subclass of: SO_0000673
so part of: Atpsckmt
location: complement(join(2371154..2372772,2381298..2381348,2384523..2384660,2386745..2387022,2392328..2392631))
location: region:2371154-2392631:-1
so has part: feature:2392328-2392631:-1:exon
so has part: feature:2386745-2387022:-1:exon
so has part: feature:2384523-2384660:-1:exon
so has part: feature:2381298-2381348:-1:exon
so has part: feature:2371154-2372772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2392328-2392631:-1:exon

position:2392328:-1
position: 2392328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2386745-2387022:-1:exon

position:2386745:-1
position: 2386745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2387022:-1
position: 2387022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2384523-2384660:-1:exon

position:2384523:-1
position: 2384523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2384660:-1
position: 2384660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2381298-2381348:-1:exon

position:2381298:-1
position: 2381298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2381348:-1
position: 2381348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2371154-2372772:-1:exon

position:2372772:-1
position: 2372772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Atpsckmt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Atpsckmt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit C lysine N-methyltransferase
translation: MVDPTSGLPGSFAMERGETPEEEGQPGPVLPPSLDPNRLKKSNWGLLFPGLIGGALVTLYAVATPFVTPALRKVCLPFVPATSKQIENVVKMLQHRRGPLVDIGSGDGRIVIAAAKEGFPAVGYELNPWLVWYSRYRAWREGVHGSARFYISDLWKVTFAQYSNVVIFGVPQMMSQLEKKLELELEDDARVIACRFPFPHWTPDHTTGEGIDTVWAYNMSTFRGREKRS
SIO_010081: Atpsckmt
subclass of: SO_0000673
so part of: Atpsckmt
location: complement(join(2372602..2372772,2381298..2381348,2384523..2384660,2386745..2387022,2392328..2392379))
location: region:2372602-2392379:-1
so has part: feature:2392328-2392379:-1:exon
so has part: feature:2386745-2387022:-1:exon
so has part: feature:2384523-2384660:-1:exon
so has part: feature:2381298-2381348:-1:exon
so has part: feature:2372602-2372772:-1:exon

XP_028737861.2
type: Protein
SIO_000068: ncbiprotein

position:2372602:-1
position: 2372602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392379:-1
position: 2392379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2392328-2392379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2386745-2387022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2384523-2384660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2381298-2381348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2372602-2372772:-1:exon

Cct5
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Cct5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2392693..2404114
location: region:2392693-2404114:1
so has part: feature:2392693-2404114:1:exon
subclass of: SO_0000010

114701840
type: Gene
SIO_000068: ncbigene

position:2392693:1
position: 2392693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2404114:1
position: 2404114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2392693-2404114:1:exon

Cct5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cct5
product: chaperonin containing TCP1 subunit 5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_028882040.2
SIO_010081: Cct5
subclass of: SO_0000673
so part of: Cct5
location: join(2392693..2392889,2396162..2396222,2396706..2396869,2398406..2398604,2399836..2400028,2400105..2400254,2400742..2400861,2401442..2401627,2401720..2401857,2402054..2402234,2403876..2404114)
location: region:2392693-2404114:1
so has part: feature:2392693-2392889:1:exon
so has part: feature:2396162-2396222:1:exon
so has part: feature:2396706-2396869:1:exon
so has part: feature:2398406-2398604:1:exon
so has part: feature:2399836-2400028:1:exon
so has part: feature:2400105-2400254:1:exon
so has part: feature:2400742-2400861:1:exon
so has part: feature:2401442-2401627:1:exon
so has part: feature:2401720-2401857:1:exon
so has part: feature:2402054-2402234:1:exon
so has part: feature:2403876-2404114:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2392693-2392889:1:exon

position:2392889:1
position: 2392889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2396162-2396222:1:exon

position:2396162:1
position: 2396162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2396222:1
position: 2396222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2396706-2396869:1:exon

position:2396706:1
position: 2396706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2396869:1
position: 2396869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2398406-2398604:1:exon

position:2398406:1
position: 2398406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2398604:1
position: 2398604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2399836-2400028:1:exon

position:2399836:1
position: 2399836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2400028:1
position: 2400028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2400105-2400254:1:exon

position:2400105:1
position: 2400105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2400254:1
position: 2400254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2400742-2400861:1:exon

position:2400742:1
position: 2400742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2400861:1
position: 2400861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2401442-2401627:1:exon

position:2401442:1
position: 2401442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2401627:1
position: 2401627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2401720-2401857:1:exon

position:2401720:1
position: 2401720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2401857:1
position: 2401857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2402054-2402234:1:exon

position:2402054:1
position: 2402054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2402234:1
position: 2402234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2403876-2404114:1:exon

position:2403876:1
position: 2403876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cct5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cct5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: T-complex protein 1 subunit epsilon
translation: MASVGTLAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSXDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIDHLDKISDHVLVDINDPEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKRVENAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIEQIKETGANLAICQWGFDDEANHLLLQNALPAVRWVGGPEIELIAIATGGRIVPRFSELTPEKLGFAGVVREISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSKEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRAKQVKESNPALGIDCLHKGTNDMQHQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGESEE
SIO_010081: Cct5
subclass of: SO_0000673
so part of: Cct5
location: join(2392785..2392889,2396162..2396222,2396706..2396869,2398406..2398604,2399836..2400028,2400105..2400254,2400742..2400861,2401442..2401627,2401720..2401857,2402054..2402234,2403876..2404003)
location: region:2392785-2404003:1
so has part: feature:2392785-2392889:1:exon
so has part: feature:2396162-2396222:1:exon
so has part: feature:2396706-2396869:1:exon
so has part: feature:2398406-2398604:1:exon
so has part: feature:2399836-2400028:1:exon
so has part: feature:2400105-2400254:1:exon
so has part: feature:2400742-2400861:1:exon
so has part: feature:2401442-2401627:1:exon
so has part: feature:2401720-2401857:1:exon
so has part: feature:2402054-2402234:1:exon
so has part: feature:2403876-2404003:1:exon

XP_028737873.1
type: Protein
SIO_000068: ncbiprotein

position:2392785:1
position: 2392785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2404003:1
position: 2404003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2392785-2392889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2396162-2396222:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2396706-2396869:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2398406-2398604:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2399836-2400028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2400105-2400254:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2400742-2400861:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2401442-2401627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2401720-2401857:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2402054-2402234:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2403876-2404003:1:exon

Cmbl
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Cmbl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2404956..2421141)
location: region:2404956-2421141:-1
so has part: feature:2404956-2421141:-1:exon
subclass of: SO_0000010

114701841
type: Gene
SIO_000068: ncbigene

position:2404956:-1
position: 2404956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2421141:-1
position: 2421141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2404956-2421141:-1:exon

Cmbl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cmbl
product: carboxymethylenebutenolidase homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_028882041.2
SIO_010081: Cmbl
subclass of: SO_0000673
so part of: Cmbl
location: complement(join(2404956..2405605,2406527..2406621,2408804..2408946,2410152..2410259,2412034..2412266,2421036..2421141))
location: region:2404956-2421141:-1
so has part: feature:2421036-2421141:-1:exon
so has part: feature:2412034-2412266:-1:exon
so has part: feature:2410152-2410259:-1:exon
so has part: feature:2408804-2408946:-1:exon
so has part: feature:2406527-2406621:-1:exon
so has part: feature:2404956-2405605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2421036-2421141:-1:exon

position:2421036:-1
position: 2421036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2412034-2412266:-1:exon

position:2412034:-1
position: 2412034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2412266:-1
position: 2412266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2410152-2410259:-1:exon

position:2410152:-1
position: 2410152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2410259:-1
position: 2410259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2408804-2408946:-1:exon

position:2408804:-1
position: 2408804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2408946:-1
position: 2408946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2406527-2406621:-1:exon

position:2406527:-1
position: 2406527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2406621:-1
position: 2406621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2404956-2405605:-1:exon

position:2405605:-1
position: 2405605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cmbl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cmbl
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(2406527..2406529),aa:OTHER)
product: LOW QUALITY PROTEIN: carboxymethylenebutenolidase homolog
translation: MANEANPCPCDIGHKLEYGGMGQEVQVEHIKAYVTRSPVDAGKAVIVVQDIFGWRLPNTRYMADMIAGNGYTAIVPDFFVGQEPWDPAGDWSTFPEWIKSKNPRNINREVEAVMRYLTQRCHAHKIGIVGFCWGGAVVHHVMMTYPEVRAGVSVYGIIRESEGIYNLKNPTLFIFAENDTVIHLSRXVSVLTQKLKEHCKVNYQVKTFSGQTHGFVHRKREDCSPADKPYIEEARRNLIEWLNKFI
SIO_010081: Cmbl
subclass of: SO_0000673
so part of: Cmbl
location: complement(join(2405426..2405605,2406527..2406621,2408804..2408946,2410152..2410259,2412034..2412248))
location: region:2405426-2412248:-1
so has part: feature:2412034-2412248:-1:exon
so has part: feature:2410152-2410259:-1:exon
so has part: feature:2408804-2408946:-1:exon
so has part: feature:2406527-2406621:-1:exon
so has part: feature:2405426-2405605:-1:exon

XP_028737874.1
type: Protein
SIO_000068: ncbiprotein

position:2405426:-1
position: 2405426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2412248:-1
position: 2412248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2412034-2412248:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2410152-2410259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2408804-2408946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2406527-2406621:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2405426-2405605:-1:exon

Marchf6
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Marchf6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2470616..2537341
location: region:2470616-2537341:1
so has part: feature:2470616-2537341:1:exon
subclass of: SO_0000010

114701838
type: Gene
SIO_000068: ncbigene

position:2470616:1
position: 2470616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2537341:1
position: 2537341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2470616-2537341:1:exon

Marchf6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Marchf6
product: membrane associated ring-CH-type finger 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_028882034.2
SIO_010081: Marchf6
subclass of: SO_0000673
so part of: Marchf6
location: join(2470616..2470907,2490834..2490930,2492265..2492338,2494948..2495091,2497818..2497890,2499881..2500049,2502851..2503040,2504606..2504667,2505400..2505432,2506948..2506999,2508322..2508380,2510151..2510231,2510461..2510529,2510613..2510687,2511669..2511803,2513467..2513586,2513774..2513874,2515598..2515735,2517888..2518089,2520339..2520408,2523482..2523678,2523774..2523812,2525470..2525604,2526912..2527001,2529216..2529348,2531452..2531587,2533940..2537341)
location: region:2470616-2537341:1
so has part: feature:2470616-2470907:1:exon
so has part: feature:2490834-2490930:1:exon
so has part: feature:2492265-2492338:1:exon
so has part: feature:2494948-2495091:1:exon
so has part: feature:2497818-2497890:1:exon
so has part: feature:2499881-2500049:1:exon
so has part: feature:2502851-2503040:1:exon
so has part: feature:2504606-2504667:1:exon
so has part: feature:2505400-2505432:1:exon
so has part: feature:2506948-2506999:1:exon
so has part: feature:2508322-2508380:1:exon
so has part: feature:2510151-2510231:1:exon
so has part: feature:2510461-2510529:1:exon
so has part: feature:2510613-2510687:1:exon
so has part: feature:2511669-2511803:1:exon
so has part: feature:2513467-2513586:1:exon
so has part: feature:2513774-2513874:1:exon
so has part: feature:2515598-2515735:1:exon
so has part: feature:2517888-2518089:1:exon
so has part: feature:2520339-2520408:1:exon
so has part: feature:2523482-2523678:1:exon
so has part: feature:2523774-2523812:1:exon
so has part: feature:2525470-2525604:1:exon
so has part: feature:2526912-2527001:1:exon
so has part: feature:2529216-2529348:1:exon
so has part: feature:2531452-2531587:1:exon
so has part: feature:2533940-2537341:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2470616-2470907:1:exon

position:2470907:1
position: 2470907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2490834-2490930:1:exon

position:2490834:1
position: 2490834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2490930:1
position: 2490930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2492265-2492338:1:exon

position:2492265:1
position: 2492265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2492338:1
position: 2492338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2494948-2495091:1:exon

position:2494948:1
position: 2494948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2495091:1
position: 2495091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2497818-2497890:1:exon

position:2497818:1
position: 2497818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2497890:1
position: 2497890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2499881-2500049:1:exon

position:2499881:1
position: 2499881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2500049:1
position: 2500049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2502851-2503040:1:exon

position:2502851:1
position: 2502851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2503040:1
position: 2503040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2504606-2504667:1:exon

position:2504606:1
position: 2504606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2504667:1
position: 2504667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2505400-2505432:1:exon

position:2505400:1
position: 2505400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2505432:1
position: 2505432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2506948-2506999:1:exon

position:2506948:1
position: 2506948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506999:1
position: 2506999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2508322-2508380:1:exon

position:2508322:1
position: 2508322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2508380:1
position: 2508380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2510151-2510231:1:exon

position:2510151:1
position: 2510151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2510231:1
position: 2510231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2510461-2510529:1:exon

position:2510461:1
position: 2510461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2510529:1
position: 2510529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2510613-2510687:1:exon

position:2510613:1
position: 2510613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2510687:1
position: 2510687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2511669-2511803:1:exon

position:2511669:1
position: 2511669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2511803:1
position: 2511803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2513467-2513586:1:exon

position:2513467:1
position: 2513467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2513586:1
position: 2513586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2513774-2513874:1:exon

position:2513774:1
position: 2513774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2513874:1
position: 2513874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2515598-2515735:1:exon

position:2515598:1
position: 2515598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2515735:1
position: 2515735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2517888-2518089:1:exon

position:2517888:1
position: 2517888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2518089:1
position: 2518089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2520339-2520408:1:exon

position:2520339:1
position: 2520339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2520408:1
position: 2520408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2523482-2523678:1:exon

position:2523482:1
position: 2523482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2523678:1
position: 2523678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2523774-2523812:1:exon

position:2523774:1
position: 2523774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2523812:1
position: 2523812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2525470-2525604:1:exon

position:2525470:1
position: 2525470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2525604:1
position: 2525604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2526912-2527001:1:exon

position:2526912:1
position: 2526912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2527001:1
position: 2527001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2529216-2529348:1:exon

position:2529216:1
position: 2529216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2529348:1
position: 2529348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2531452-2531587:1:exon

position:2531452:1
position: 2531452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2531587:1
position: 2531587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2533940-2537341:1:exon

position:2533940:1
position: 2533940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Marchf6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Marchf6
product: membrane associated ring-CH-type finger 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_028882036.2
SIO_010081: Marchf6
subclass of: SO_0000673
so part of: Marchf6
location: join(2470616..2470907,2490834..2490930,2492265..2492338,2494948..2495091,2497818..2497890,2499881..2500049,2502851..2503040,2504606..2504667,2505400..2505432,2506948..2506999,2508322..2508380,2510151..2510231,2510461..2510529,2510613..2510687,2511669..2511803,2513467..2513586,2513774..2513874,2515598..2515735,2517888..2518089,2520339..2520408,2523482..2523678,2525470..2525604,2526912..2527001,2529216..2529348,2531452..2531587,2533940..2534057)
location: region:2470616-2534057:1
so has part: feature:2470616-2470907:1:exon
so has part: feature:2490834-2490930:1:exon
so has part: feature:2492265-2492338:1:exon
so has part: feature:2494948-2495091:1:exon
so has part: feature:2497818-2497890:1:exon
so has part: feature:2499881-2500049:1:exon
so has part: feature:2502851-2503040:1:exon
so has part: feature:2504606-2504667:1:exon
so has part: feature:2505400-2505432:1:exon
so has part: feature:2506948-2506999:1:exon
so has part: feature:2508322-2508380:1:exon
so has part: feature:2510151-2510231:1:exon
so has part: feature:2510461-2510529:1:exon
so has part: feature:2510613-2510687:1:exon
so has part: feature:2511669-2511803:1:exon
so has part: feature:2513467-2513586:1:exon
so has part: feature:2513774-2513874:1:exon
so has part: feature:2515598-2515735:1:exon
so has part: feature:2517888-2518089:1:exon
so has part: feature:2520339-2520408:1:exon
so has part: feature:2523482-2523678:1:exon
so has part: feature:2525470-2525604:1:exon
so has part: feature:2526912-2527001:1:exon
so has part: feature:2529216-2529348:1:exon
so has part: feature:2531452-2531587:1:exon
so has part: feature:2533940-2534057:1:exon

position:2534057:1
position: 2534057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2470616-2470907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2490834-2490930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2492265-2492338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2494948-2495091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2497818-2497890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2499881-2500049:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2502851-2503040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2504606-2504667:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2505400-2505432:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2506948-2506999:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2508322-2508380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2510151-2510231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2510461-2510529:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2510613-2510687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2511669-2511803:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2513467-2513586:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2513774-2513874:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2515598-2515735:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2517888-2518089:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2520339-2520408:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2523482-2523678:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2525470-2525604:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2526912-2527001:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2529216-2529348:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2531452-2531587:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2533940-2534057:1:exon

Marchf6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Marchf6
product: membrane associated ring-CH-type finger 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_028882035.2
SIO_010081: Marchf6
subclass of: SO_0000673
so part of: Marchf6
location: join(2470616..2470907,2490834..2490930,2492265..2492338,2494948..2495091,2497818..2497890,2499881..2500049,2502851..2503040,2504606..2504667,2505400..2505432,2506948..2506999,2508322..2508380,2510151..2510231,2510461..2510529,2510613..2510687,2511669..2511803,2513467..2513586,2513774..2513874,2515598..2515735,2517888..2518089,2520339..2520408,2523497..2523678,2523774..2523812,2525470..2525604,2526912..2527001,2529216..2529348,2531452..2531587,2533940..2534057)
location: region:2470616-2534057:1
so has part: feature:2470616-2470907:1:exon
so has part: feature:2490834-2490930:1:exon
so has part: feature:2492265-2492338:1:exon
so has part: feature:2494948-2495091:1:exon
so has part: feature:2497818-2497890:1:exon
so has part: feature:2499881-2500049:1:exon
so has part: feature:2502851-2503040:1:exon
so has part: feature:2504606-2504667:1:exon
so has part: feature:2505400-2505432:1:exon
so has part: feature:2506948-2506999:1:exon
so has part: feature:2508322-2508380:1:exon
so has part: feature:2510151-2510231:1:exon
so has part: feature:2510461-2510529:1:exon
so has part: feature:2510613-2510687:1:exon
so has part: feature:2511669-2511803:1:exon
so has part: feature:2513467-2513586:1:exon
so has part: feature:2513774-2513874:1:exon
so has part: feature:2515598-2515735:1:exon
so has part: feature:2517888-2518089:1:exon
so has part: feature:2520339-2520408:1:exon
so has part: feature:2523497-2523678:1:exon
so has part: feature:2523774-2523812:1:exon
so has part: feature:2525470-2525604:1:exon
so has part: feature:2526912-2527001:1:exon
so has part: feature:2529216-2529348:1:exon
so has part: feature:2531452-2531587:1:exon
so has part: feature:2533940-2534057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2470616-2470907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2490834-2490930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2492265-2492338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2494948-2495091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2497818-2497890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2499881-2500049:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2502851-2503040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2504606-2504667:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2505400-2505432:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2506948-2506999:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2508322-2508380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2510151-2510231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2510461-2510529:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2510613-2510687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2511669-2511803:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2513467-2513586:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2513774-2513874:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2515598-2515735:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2517888-2518089:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2520339-2520408:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2523497-2523678:1:exon

position:2523497:1
position: 2523497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2523774-2523812:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2525470-2525604:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2526912-2527001:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2529216-2529348:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2531452-2531587:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2533940-2534057:1:exon

Marchf6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Marchf6
product: membrane associated ring-CH-type finger 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_028882037.2
SIO_010081: Marchf6
subclass of: SO_0000673
so part of: Marchf6
location: join(2470616..2470907,2490834..2490930,2492265..2492338,2494948..2495091,2497818..2497890,2499881..2500049,2502851..2503040,2504606..2504667,2505400..2505432,2506948..2506999,2508322..2508380,2510151..2510231,2510461..2510529,2510613..2510687,2511669..2511803,2513467..2513586,2513774..2513874,2515598..2515735,2517888..2518089,2520339..2520408,2523497..2523678,2525470..2525604,2526912..2527001,2529216..2529348,2531452..2531587,2533940..2534057)
location: region:2470616-2534057:1
so has part: feature:2470616-2470907:1:exon
so has part: feature:2490834-2490930:1:exon
so has part: feature:2492265-2492338:1:exon
so has part: feature:2494948-2495091:1:exon
so has part: feature:2497818-2497890:1:exon
so has part: feature:2499881-2500049:1:exon
so has part: feature:2502851-2503040:1:exon
so has part: feature:2504606-2504667:1:exon
so has part: feature:2505400-2505432:1:exon
so has part: feature:2506948-2506999:1:exon
so has part: feature:2508322-2508380:1:exon
so has part: feature:2510151-2510231:1:exon
so has part: feature:2510461-2510529:1:exon
so has part: feature:2510613-2510687:1:exon
so has part: feature:2511669-2511803:1:exon
so has part: feature:2513467-2513586:1:exon
so has part: feature:2513774-2513874:1:exon
so has part: feature:2515598-2515735:1:exon
so has part: feature:2517888-2518089:1:exon
so has part: feature:2520339-2520408:1:exon
so has part: feature:2523497-2523678:1:exon
so has part: feature:2525470-2525604:1:exon
so has part: feature:2526912-2527001:1:exon
so has part: feature:2529216-2529348:1:exon
so has part: feature:2531452-2531587:1:exon
so has part: feature:2533940-2534057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2470616-2470907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2490834-2490930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2492265-2492338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2494948-2495091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2497818-2497890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2499881-2500049:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2502851-2503040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2504606-2504667:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2505400-2505432:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2506948-2506999:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2508322-2508380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2510151-2510231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2510461-2510529:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2510613-2510687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2511669-2511803:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2513467-2513586:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2513774-2513874:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2515598-2515735:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2517888-2518089:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2520339-2520408:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2523497-2523678:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2525470-2525604:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2526912-2527001:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2529216-2529348:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2531452-2531587:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2533940-2534057:1:exon

Marchf6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Marchf6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MARCHF6 isoform X1
translation: MDTAEEDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYSPDMPSRLPIQDIFAGLVTSIGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLFTGSVSSLLTLPLDMLSTENLLADCLQGCFVVTCTLCAFISLVWLREQIVHGGAPIWLEHAAPAFNAAGHHQNEAPVGGNGAENAAADQPANPAGENAVLGENPDAQDGQAEEEEEDNEEEDDAGVEDAADANNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFLEHVFWVVSLNTLFILVFAFCPYHIGHFSLVGLGFEEHVQASHFEGLITTIVGYILLAITLIICHALATLVKFHRSRRLLGVCYIVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDATLKDRELSFQSAPGTTMFLHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRFILSVIVFGSIVLLMLWLPIRIIKSLLPNFLPYNVMLYSDAPVSELSLELLLLQVVLPALLEQGHTRQWLKGLVRAWTVTAGYLLDLHSYLLGDQEENENSANQQVNNNQPARNNNAVPAGEGLHAAHQAILQQGGPVGFQPYRRPFNFPLRIFLLIVFMCITLLIASLICLTLPAFLFSVFAGRWLMSFWTGTAKIHELYTAACGLYVCWLTIRAVTVLVAWMPQGRRVIFQKVKEWSLMESLSFYQNDCSFKIMKTLIVAVLLAGVVPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVLHAKIIAAITLMGPQWWLKTVIEQVYANGIRNIDLHYIIRKLAAPVISVLLLSLCIPYVIASGVVPLLGVTAEMQNLVHRRIYPFLLMVVVLMGILSFQVRQFKRLYEHIKNDKYLVGQRLVNYERKSGKQGPSTPPPQSSQE
SIO_010081: Marchf6
subclass of: SO_0000673
so part of: Marchf6
location: join(2470889..2470907,2490834..2490930,2492265..2492338,2494948..2495091,2497818..2497890,2499881..2500049,2502851..2503040,2504606..2504667,2505400..2505432,2506948..2506999,2508322..2508380,2510151..2510231,2510461..2510529,2510613..2510687,2511669..2511803,2513467..2513586,2513774..2513874,2515598..2515735,2517888..2518089,2520339..2520408,2523482..2523678,2523774..2523812,2525470..2525604,2526912..2527001,2529216..2529348,2531452..2531587,2533940..2534030)
location: region:2470889-2534030:1
so has part: feature:2470889-2470907:1:exon
so has part: feature:2490834-2490930:1:exon
so has part: feature:2492265-2492338:1:exon
so has part: feature:2494948-2495091:1:exon
so has part: feature:2497818-2497890:1:exon
so has part: feature:2499881-2500049:1:exon
so has part: feature:2502851-2503040:1:exon
so has part: feature:2504606-2504667:1:exon
so has part: feature:2505400-2505432:1:exon
so has part: feature:2506948-2506999:1:exon
so has part: feature:2508322-2508380:1:exon
so has part: feature:2510151-2510231:1:exon
so has part: feature:2510461-2510529:1:exon
so has part: feature:2510613-2510687:1:exon
so has part: feature:2511669-2511803:1:exon
so has part: feature:2513467-2513586:1:exon
so has part: feature:2513774-2513874:1:exon
so has part: feature:2515598-2515735:1:exon
so has part: feature:2517888-2518089:1:exon
so has part: feature:2520339-2520408:1:exon
so has part: feature:2523482-2523678:1:exon
so has part: feature:2523774-2523812:1:exon
so has part: feature:2525470-2525604:1:exon
so has part: feature:2526912-2527001:1:exon
so has part: feature:2529216-2529348:1:exon
so has part: feature:2531452-2531587:1:exon
so has part: feature:2533940-2534030:1:exon

XP_028737867.1
type: Protein
SIO_000068: ncbiprotein

position:2470889:1
position: 2470889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2534030:1
position: 2534030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2470889-2470907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2490834-2490930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2492265-2492338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2494948-2495091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2497818-2497890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2499881-2500049:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2502851-2503040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2504606-2504667:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2505400-2505432:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2506948-2506999:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2508322-2508380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2510151-2510231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2510461-2510529:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2510613-2510687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2511669-2511803:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2513467-2513586:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2513774-2513874:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2515598-2515735:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2517888-2518089:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2520339-2520408:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2523482-2523678:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2523774-2523812:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2525470-2525604:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2526912-2527001:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2529216-2529348:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2531452-2531587:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2533940-2534030:1:exon

Marchf6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Marchf6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MARCHF6 isoform X3
translation: MDTAEEDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYSPDMPSRLPIQDIFAGLVTSIGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLFTGSVSSLLTLPLDMLSTENLLADCLQGCFVVTCTLCAFISLVWLREQIVHGGAPIWLEHAAPAFNAAGHHQNEAPVGGNGAENAAADQPANPAGENAVLGENPDAQDGQAEEEEEDNEEEDDAGVEDAADANNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFLEHVFWVVSLNTLFILVFAFCPYHIGHFSLVGLGFEEHVQASHFEGLITTIVGYILLAITLIICHALATLVKFHRSRRLLGVCYIVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDATLKDRELSFQSAPGTTMFLHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRFILSVIVFGSIVLLMLWLPIRIIKSLLPNFLPYNVMLYSDAPVSELSLELLLLQVVLPALLEQGHTRQWLKGLVRAWTVTAGYLLDLHSYLLGDQEENENSANQQVNNNQPARNNNAVPAGEGLHAAHQAILQQGGPVGFQPYRRPFNFPLRIFLLIVFMCITLLIASLICLTLPAFLFSVFAGRWLMSFWTGTAKIHELYTAACGLYVCWLTIRAVTVLVAWMPQGRRVIFQKVKEWSLMIMKTLIVAVLLAGVVPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVLHAKIIAAITLMGPQWWLKTVIEQVYANGIRNIDLHYIIRKLAAPVISVLLLSLCIPYVIASGVVPLLGVTAEMQNLVHRRIYPFLLMVVVLMGILSFQVRQFKRLYEHIKNDKYLVGQRLVNYERKSGKQGPSTPPPQSSQE
SIO_010081: Marchf6
subclass of: SO_0000673
so part of: Marchf6
location: join(2470889..2470907,2490834..2490930,2492265..2492338,2494948..2495091,2497818..2497890,2499881..2500049,2502851..2503040,2504606..2504667,2505400..2505432,2506948..2506999,2508322..2508380,2510151..2510231,2510461..2510529,2510613..2510687,2511669..2511803,2513467..2513586,2513774..2513874,2515598..2515735,2517888..2518089,2520339..2520408,2523482..2523678,2525470..2525604,2526912..2527001,2529216..2529348,2531452..2531587,2533940..2534030)
location: region:2470889-2534030:1
so has part: feature:2470889-2470907:1:exon
so has part: feature:2490834-2490930:1:exon
so has part: feature:2492265-2492338:1:exon
so has part: feature:2494948-2495091:1:exon
so has part: feature:2497818-2497890:1:exon
so has part: feature:2499881-2500049:1:exon
so has part: feature:2502851-2503040:1:exon
so has part: feature:2504606-2504667:1:exon
so has part: feature:2505400-2505432:1:exon
so has part: feature:2506948-2506999:1:exon
so has part: feature:2508322-2508380:1:exon
so has part: feature:2510151-2510231:1:exon
so has part: feature:2510461-2510529:1:exon
so has part: feature:2510613-2510687:1:exon
so has part: feature:2511669-2511803:1:exon
so has part: feature:2513467-2513586:1:exon
so has part: feature:2513774-2513874:1:exon
so has part: feature:2515598-2515735:1:exon
so has part: feature:2517888-2518089:1:exon
so has part: feature:2520339-2520408:1:exon
so has part: feature:2523482-2523678:1:exon
so has part: feature:2525470-2525604:1:exon
so has part: feature:2526912-2527001:1:exon
so has part: feature:2529216-2529348:1:exon
so has part: feature:2531452-2531587:1:exon
so has part: feature:2533940-2534030:1:exon

XP_028737869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2470889-2470907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2490834-2490930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2492265-2492338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2494948-2495091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2497818-2497890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2499881-2500049:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2502851-2503040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2504606-2504667:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2505400-2505432:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2506948-2506999:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2508322-2508380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2510151-2510231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2510461-2510529:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2510613-2510687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2511669-2511803:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2513467-2513586:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2513774-2513874:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2515598-2515735:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2517888-2518089:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2520339-2520408:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2523482-2523678:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2525470-2525604:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2526912-2527001:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2529216-2529348:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2531452-2531587:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2533940-2534030:1:exon

Marchf6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Marchf6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MARCHF6 isoform X2
translation: MDTAEEDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYSPDMPSRLPIQDIFAGLVTSIGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLFTGSVSSLLTLPLDMLSTENLLADCLQGCFVVTCTLCAFISLVWLREQIVHGGAPIWLEHAAPAFNAAGHHQNEAPVGGNGAENAAADQPANPAGENAVLGENPDAQDGQAEEEEEDNEEEDDAGVEDAADANNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFLEHVFWVVSLNTLFILVFAFCPYHIGHFSLVGLGFEEHVQASHFEGLITTIVGYILLAITLIICHALATLVKFHRSRRLLGVCYIVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDATLKDRELSFQSAPGTTMFLHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRFILSVIVFGSIVLLMLWLPIRIIKSLLPNFLPYNVMLYSDAPVSELSLELLLLQVVLPALLEQGHTRQWLKGLVRAWTVTAGYLLDLHSYLLGDQEENENSANQQVNNNQPARNNNAVPAGEGLHAAHQAILQQGGPVGFQPYRRPFNFPLRIFLLIVFMCITLLIASLICLTLPVFAGRWLMSFWTGTAKIHELYTAACGLYVCWLTIRAVTVLVAWMPQGRRVIFQKVKEWSLMESLSFYQNDCSFKIMKTLIVAVLLAGVVPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVLHAKIIAAITLMGPQWWLKTVIEQVYANGIRNIDLHYIIRKLAAPVISVLLLSLCIPYVIASGVVPLLGVTAEMQNLVHRRIYPFLLMVVVLMGILSFQVRQFKRLYEHIKNDKYLVGQRLVNYERKSGKQGPSTPPPQSSQE
SIO_010081: Marchf6
subclass of: SO_0000673
so part of: Marchf6
location: join(2470889..2470907,2490834..2490930,2492265..2492338,2494948..2495091,2497818..2497890,2499881..2500049,2502851..2503040,2504606..2504667,2505400..2505432,2506948..2506999,2508322..2508380,2510151..2510231,2510461..2510529,2510613..2510687,2511669..2511803,2513467..2513586,2513774..2513874,2515598..2515735,2517888..2518089,2520339..2520408,2523497..2523678,2523774..2523812,2525470..2525604,2526912..2527001,2529216..2529348,2531452..2531587,2533940..2534030)
location: region:2470889-2534030:1
so has part: feature:2470889-2470907:1:exon
so has part: feature:2490834-2490930:1:exon
so has part: feature:2492265-2492338:1:exon
so has part: feature:2494948-2495091:1:exon
so has part: feature:2497818-2497890:1:exon
so has part: feature:2499881-2500049:1:exon
so has part: feature:2502851-2503040:1:exon
so has part: feature:2504606-2504667:1:exon
so has part: feature:2505400-2505432:1:exon
so has part: feature:2506948-2506999:1:exon
so has part: feature:2508322-2508380:1:exon
so has part: feature:2510151-2510231:1:exon
so has part: feature:2510461-2510529:1:exon
so has part: feature:2510613-2510687:1:exon
so has part: feature:2511669-2511803:1:exon
so has part: feature:2513467-2513586:1:exon
so has part: feature:2513774-2513874:1:exon
so has part: feature:2515598-2515735:1:exon
so has part: feature:2517888-2518089:1:exon
so has part: feature:2520339-2520408:1:exon
so has part: feature:2523497-2523678:1:exon
so has part: feature:2523774-2523812:1:exon
so has part: feature:2525470-2525604:1:exon
so has part: feature:2526912-2527001:1:exon
so has part: feature:2529216-2529348:1:exon
so has part: feature:2531452-2531587:1:exon
so has part: feature:2533940-2534030:1:exon

XP_028737868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2470889-2470907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2490834-2490930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2492265-2492338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2494948-2495091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2497818-2497890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2499881-2500049:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2502851-2503040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2504606-2504667:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2505400-2505432:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2506948-2506999:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2508322-2508380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2510151-2510231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2510461-2510529:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2510613-2510687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2511669-2511803:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2513467-2513586:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2513774-2513874:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2515598-2515735:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2517888-2518089:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2520339-2520408:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2523497-2523678:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2523774-2523812:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2525470-2525604:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2526912-2527001:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2529216-2529348:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2531452-2531587:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2533940-2534030:1:exon

Marchf6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Marchf6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MARCHF6 isoform X4
translation: MDTAEEDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYSPDMPSRLPIQDIFAGLVTSIGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLFTGSVSSLLTLPLDMLSTENLLADCLQGCFVVTCTLCAFISLVWLREQIVHGGAPIWLEHAAPAFNAAGHHQNEAPVGGNGAENAAADQPANPAGENAVLGENPDAQDGQAEEEEEDNEEEDDAGVEDAADANNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFLEHVFWVVSLNTLFILVFAFCPYHIGHFSLVGLGFEEHVQASHFEGLITTIVGYILLAITLIICHALATLVKFHRSRRLLGVCYIVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDATLKDRELSFQSAPGTTMFLHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRFILSVIVFGSIVLLMLWLPIRIIKSLLPNFLPYNVMLYSDAPVSELSLELLLLQVVLPALLEQGHTRQWLKGLVRAWTVTAGYLLDLHSYLLGDQEENENSANQQVNNNQPARNNNAVPAGEGLHAAHQAILQQGGPVGFQPYRRPFNFPLRIFLLIVFMCITLLIASLICLTLPVFAGRWLMSFWTGTAKIHELYTAACGLYVCWLTIRAVTVLVAWMPQGRRVIFQKVKEWSLMIMKTLIVAVLLAGVVPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVLHAKIIAAITLMGPQWWLKTVIEQVYANGIRNIDLHYIIRKLAAPVISVLLLSLCIPYVIASGVVPLLGVTAEMQNLVHRRIYPFLLMVVVLMGILSFQVRQFKRLYEHIKNDKYLVGQRLVNYERKSGKQGPSTPPPQSSQE
SIO_010081: Marchf6
subclass of: SO_0000673
so part of: Marchf6
location: join(2470889..2470907,2490834..2490930,2492265..2492338,2494948..2495091,2497818..2497890,2499881..2500049,2502851..2503040,2504606..2504667,2505400..2505432,2506948..2506999,2508322..2508380,2510151..2510231,2510461..2510529,2510613..2510687,2511669..2511803,2513467..2513586,2513774..2513874,2515598..2515735,2517888..2518089,2520339..2520408,2523497..2523678,2525470..2525604,2526912..2527001,2529216..2529348,2531452..2531587,2533940..2534030)
location: region:2470889-2534030:1
so has part: feature:2470889-2470907:1:exon
so has part: feature:2490834-2490930:1:exon
so has part: feature:2492265-2492338:1:exon
so has part: feature:2494948-2495091:1:exon
so has part: feature:2497818-2497890:1:exon
so has part: feature:2499881-2500049:1:exon
so has part: feature:2502851-2503040:1:exon
so has part: feature:2504606-2504667:1:exon
so has part: feature:2505400-2505432:1:exon
so has part: feature:2506948-2506999:1:exon
so has part: feature:2508322-2508380:1:exon
so has part: feature:2510151-2510231:1:exon
so has part: feature:2510461-2510529:1:exon
so has part: feature:2510613-2510687:1:exon
so has part: feature:2511669-2511803:1:exon
so has part: feature:2513467-2513586:1:exon
so has part: feature:2513774-2513874:1:exon
so has part: feature:2515598-2515735:1:exon
so has part: feature:2517888-2518089:1:exon
so has part: feature:2520339-2520408:1:exon
so has part: feature:2523497-2523678:1:exon
so has part: feature:2525470-2525604:1:exon
so has part: feature:2526912-2527001:1:exon
so has part: feature:2529216-2529348:1:exon
so has part: feature:2531452-2531587:1:exon
so has part: feature:2533940-2534030:1:exon

XP_028737870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2470889-2470907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2490834-2490930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2492265-2492338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2494948-2495091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2497818-2497890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2499881-2500049:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2502851-2503040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2504606-2504667:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2505400-2505432:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2506948-2506999:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2508322-2508380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2510151-2510231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2510461-2510529:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2510613-2510687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2511669-2511803:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2513467-2513586:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2513774-2513874:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2515598-2515735:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2517888-2518089:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2520339-2520408:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2523497-2523678:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2525470-2525604:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2526912-2527001:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2529216-2529348:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2531452-2531587:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2533940-2534030:1:exon

Ropn1l
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Ropn1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2539277..2548653
location: region:2539277-2548653:1
so has part: feature:2539277-2548653:1:exon
subclass of: SO_0000010

114701839
type: Gene
SIO_000068: ncbigene

position:2539277:1
position: 2539277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2548653:1
position: 2548653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2539277-2548653:1:exon

Ropn1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Ropn1l
product: rhophilin associated tail protein 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_028882039.2
SIO_010081: Ropn1l
subclass of: SO_0000673
so part of: Ropn1l
location: join(2539277..2539560,2542030..2542153,2542416..2542577,2546538..2546713,2548474..2548653)
location: region:2539277-2548653:1
so has part: feature:2539277-2539560:1:exon
so has part: feature:2542030-2542153:1:exon
so has part: feature:2542416-2542577:1:exon
so has part: feature:2546538-2546713:1:exon
so has part: feature:2548474-2548653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2539277-2539560:1:exon

position:2539560:1
position: 2539560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2542030-2542153:1:exon

position:2542030:1
position: 2542030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2542153:1
position: 2542153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2542416-2542577:1:exon

position:2542416:1
position: 2542416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2542577:1
position: 2542577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2546538-2546713:1:exon

position:2546538:1
position: 2546538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2546713:1
position: 2546713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2548474-2548653:1:exon

position:2548474:1
position: 2548474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ropn1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Ropn1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ropporin-1-like protein
translation: MPLPDTMFCAQQIHIPPELPDILKQFTKAAIRTQPLDVLQWSAGYFSALSRGDPLPIKDRIEMPVATQKTDTGLTQGLLKVLHKQCSHKQYVELPDLEKKWKNLCLPVEKFRAILELDPCEEKVEWIKFLALGCSSLGGTLNTAMKNVCEILTTDPEGGPARIPFETYAYIYQYLSDLDPELPASDTETYLATLREKAESKKNGMIGLSDFYVARKSI
SIO_010081: Ropn1l
subclass of: SO_0000673
so part of: Ropn1l
location: join(2539430..2539560,2542030..2542153,2542416..2542577,2546538..2546713,2548474..2548537)
location: region:2539430-2548537:1
so has part: feature:2539430-2539560:1:exon
so has part: feature:2542030-2542153:1:exon
so has part: feature:2542416-2542577:1:exon
so has part: feature:2546538-2546713:1:exon
so has part: feature:2548474-2548537:1:exon

XP_028737872.1
type: Protein
SIO_000068: ncbiprotein

position:2539430:1
position: 2539430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2548537:1
position: 2548537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2539430-2539560:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2542030-2542153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2542416-2542577:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2546538-2546713:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2548474-2548537:1:exon

LOC119088748
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119088748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2569443..2571465)
location: region:2569443-2571465:-1
so has part: feature:2569443-2571465:-1:exon
subclass of: SO_0000011

119088748
type: Gene
SIO_000068: ncbigene

position:2569443:-1
position: 2569443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2571465:-1
position: 2571465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2569443-2571465:-1:exon

LOC119088748
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119088748
product: uncharacterized LOC119088748
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_005092468.1
SIO_010081: LOC119088748
subclass of: SO_0000673
so part of: LOC119088748
location: complement(join(2569443..2569912,2570616..2571465))
location: region:2569443-2571465:-1
so has part: feature:2570616-2571465:-1:exon
so has part: feature:2569443-2569912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2570616-2571465:-1:exon

position:2570616:-1
position: 2570616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2569443-2569912:-1:exon

position:2569912:-1
position: 2569912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119088749
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119088749
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2579270..2580233)
location: region:2579270-2580233:-1
so has part: feature:2579270-2580233:-1:exon
subclass of: SO_0000011

119088749
type: Gene
SIO_000068: ncbigene

position:2579270:-1
position: 2579270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2580233:-1
position: 2580233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2579270-2580233:-1:exon

LOC119088749
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119088749
product: uncharacterized LOC119088749
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005092469.1
SIO_010081: LOC119088749
subclass of: SO_0000673
so part of: LOC119088749
location: complement(join(2579270..2579756,2580076..2580233))
location: region:2579270-2580233:-1
so has part: feature:2580076-2580233:-1:exon
so has part: feature:2579270-2579756:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2580076-2580233:-1:exon

position:2580076:-1
position: 2580076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2579270-2579756:-1:exon

position:2579756:-1
position: 2579756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114701836
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114701836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2594858..2623069)
location: region:2594858-2623069:-1
so has part: feature:2594858-2623069:-1:exon

114701836
type: Gene
SIO_000068: ncbigene

position:2594858:-1
position: 2594858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2623069:-1
position: 2623069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2594858-2623069:-1:exon

LOC114701836
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114701836
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114701836
subclass of: SO_0000673
so part of: LOC114701836
location: complement(2594858..2596379)
location: region:2594858-2596379:-1
so has part: feature:2594858-2596379:-1:exon

position:2596379:-1
position: 2596379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2594858-2596379:-1:exon

LOC114701836
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114701836
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114701836
subclass of: SO_0000673
so part of: LOC114701836
location: complement(2600021..2600137)
location: region:2600021-2600137:-1
so has part: feature:2600021-2600137:-1:exon

position:2600021:-1
position: 2600021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2600137:-1
position: 2600137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2600021-2600137:-1:exon

LOC114701836
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114701836
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114701836
subclass of: SO_0000673
so part of: LOC114701836
location: complement(2607232..2607891)
location: region:2607232-2607891:-1
so has part: feature:2607232-2607891:-1:exon

position:2607232:-1
position: 2607232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2607891:-1
position: 2607891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2607232-2607891:-1:exon

LOC114701836
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114701836
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114701836
subclass of: SO_0000673
so part of: LOC114701836
location: complement(2612460..2612558)
location: region:2612460-2612558:-1
so has part: feature:2612460-2612558:-1:exon

position:2612460:-1
position: 2612460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2612558:-1
position: 2612558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2612460-2612558:-1:exon

LOC114701836
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114701836
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114701836
subclass of: SO_0000673
so part of: LOC114701836
location: complement(2621829..2623069)
location: region:2621829-2623069:-1
so has part: feature:2621829-2623069:-1:exon

position:2621829:-1
position: 2621829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2621829-2623069:-1:exon

Ankrd33b
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Ankrd33b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2625891..2704552
location: region:2625891-2704552:1
so has part: feature:2625891-2704552:1:exon
subclass of: SO_0000010

114701835
type: Gene
SIO_000068: ncbigene

position:2625891:1
position: 2625891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2704552:1
position: 2704552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2625891-2704552:1:exon

Ankrd33b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Ankrd33b
product: ankyrin repeat domain 33B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_028882033.2
SIO_010081: Ankrd33b
subclass of: SO_0000673
so part of: Ankrd33b
location: join(2625891..2626890,2694047..2694171)
location: region:2625891-2694171:1
so has part: feature:2625891-2626890:1:exon
so has part: feature:2694047-2694171:1:exon

position:2694171:1
position: 2694171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2625891-2626890:1:exon

position:2626890:1
position: 2626890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2694047-2694171:1:exon

position:2694047:1
position: 2694047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ankrd33b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Ankrd33b
product: ankyrin repeat domain 33B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_028882032.2
SIO_010081: Ankrd33b
subclass of: SO_0000673
so part of: Ankrd33b
location: join(2626088..2626890,2674385..2674514,2694047..2694187,2702409..2704552)
location: region:2626088-2704552:1
so has part: feature:2626088-2626890:1:exon
so has part: feature:2674385-2674514:1:exon
so has part: feature:2694047-2694187:1:exon
so has part: feature:2702409-2704552:1:exon

position:2626088:1
position: 2626088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2626088-2626890:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2674385-2674514:1:exon

position:2674385:1
position: 2674385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2674514:1
position: 2674514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2694047-2694187:1:exon

position:2694187:1
position: 2694187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2702409-2704552:1:exon

position:2702409:1
position: 2702409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ankrd33b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Ankrd33b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 33B isoform X1
translation: MVLLAGPGPEGGGTRCLSPQSPTPPRGAQTGDDPGDYEEYEDFSSLPDTRSIASDDSFYPPGGEEECGAASAECVPEGVPEAATLLRAACTNDVGLLRALVLRGPSSEEVQETDRNGRTGLIVACYHGFVDTVVALAECPHVDVNWQDSEGNTALITAAQAGHATITNYLLNYFPGLDLERRNIFGFTALMKAAMQGRTECVRALMLAGADVQARDPRRGMSPQEWAAYTGRVEAVRVIQRLMERPCPEQFGDKYKPELPLPPEVLLKAPGSKNCFQRFAEFLRTALSSRSGQSLEDGGVLDHMVRMTTSLYSPAVAVVCQTVCPENPPCVGKRRLAVQEILAARGNWDACALDSNKVEGSDPQFQTLEGPRASPWPSQSSGTPGSTPAPVSRKASLLPLQLLRRSSVRPGVVVPRVRISKAPAPTFQPERPAPKGNTKDSIHLQIPKWRYKEAKEEKRKAEEAEKKRQAEVQKEKRAPRWRKRT
SIO_010081: Ankrd33b
subclass of: SO_0000673
so part of: Ankrd33b
location: join(2626537..2626890,2674385..2674514,2694047..2694187,2702409..2703241)
location: region:2626537-2703241:1
so has part: feature:2626537-2626890:1:exon
so has part: feature:2674385-2674514:1:exon
so has part: feature:2694047-2694187:1:exon
so has part: feature:2702409-2703241:1:exon

XP_028737865.1
type: Protein
SIO_000068: ncbiprotein

position:2626537:1
position: 2626537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2703241:1
position: 2703241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2626537-2626890:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2674385-2674514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2694047-2694187:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2702409-2703241:1:exon

Ankrd33b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Ankrd33b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 33B isoform X2
translation: MVLLAGPGPEGGGTRCLSPQSPTPPRGAQTGDDPGDYEEYEDFSSLPDTRSIASDDSFYPPGGEEECGAASAECVPEGVPEAATLLRAACTNDVGLLRALVLRGPSSEEVQETDRNGRGMPPSPTTC
SIO_010081: Ankrd33b
subclass of: SO_0000673
so part of: Ankrd33b
location: join(2626537..2626890,2694047..2694076)
location: region:2626537-2694076:1
so has part: feature:2626537-2626890:1:exon
so has part: feature:2694047-2694076:1:exon

XP_028737866.1
type: Protein
SIO_000068: ncbiprotein

position:2694076:1
position: 2694076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2626537-2626890:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2694047-2694076:1:exon

LOC114701834
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114701834
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2727727..2781965)
location: region:2727727-2781965:-1
so has part: feature:2727727-2781965:-1:exon
subclass of: SO_0000010

114701834
type: Gene
SIO_000068: ncbigene

position:2727727:-1
position: 2727727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2781965:-1
position: 2781965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2727727-2781965:-1:exon

LOC114701834
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114701834
product: death associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 109 samples with support for all annotated introns
transcript id: XM_028882031.2
SIO_010081: LOC114701834
subclass of: SO_0000673
so part of: LOC114701834
location: complement(join(2727727..2728951,2730110..2730152,2769144..2769240,2781825..2781965))
location: region:2727727-2781965:-1
so has part: feature:2781825-2781965:-1:exon
so has part: feature:2769144-2769240:-1:exon
so has part: feature:2730110-2730152:-1:exon
so has part: feature:2727727-2728951:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2781825-2781965:-1:exon

position:2781825:-1
position: 2781825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2769144-2769240:-1:exon

position:2769144:-1
position: 2769144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2769240:-1
position: 2769240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2730110-2730152:-1:exon

position:2730110:-1
position: 2730110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2730152:-1
position: 2730152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2727727-2728951:-1:exon

position:2728951:-1
position: 2728951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114701834
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114701834
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death-associated protein 1
translation: MSSPPEGKLETKAGHPPAVKAGGMRIVQKHPHTGDGKEEKDKDEQEWESTSPPKPTVFISGVIARGDKDFPPAAAQVAHQKPHASMDKHVSPRTQHIQQPRK
SIO_010081: LOC114701834
subclass of: SO_0000673
so part of: LOC114701834
location: complement(join(2728838..2728951,2730110..2730152,2769144..2769240,2781825..2781879))
location: region:2728838-2781879:-1
so has part: feature:2781825-2781879:-1:exon
so has part: feature:2769144-2769240:-1:exon
so has part: feature:2730110-2730152:-1:exon
so has part: feature:2728838-2728951:-1:exon

XP_028737864.1
type: Protein
SIO_000068: ncbiprotein

position:2728838:-1
position: 2728838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2781879:-1
position: 2781879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2781825-2781879:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2769144-2769240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2730110-2730152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2728838-2728951:-1:exon

Ctnnd2
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Ctnnd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2984676..3859430)
location: region:2984676-3859430:-1
so has part: feature:2984676-3859430:-1:exon
subclass of: SO_0000010

114701847
type: Gene
SIO_000068: ncbigene

position:2984676:-1
position: 2984676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3859430:-1
position: 3859430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2984676-3859430:-1:exon

Ctnnd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Ctnnd2
product: catenin delta 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_028882044.2
SIO_010081: Ctnnd2
subclass of: SO_0000673
so part of: Ctnnd2
location: complement(join(2984676..2986432,2993014..2993087,2998726..2998857,3002827..3002953,3027321..3027405,3033022..3033232,3083343..3083493,3084512..3084586,3098823..3098996,3118380..3118565,3124687..3124804,3174667..3174850,3216154..3216367,3245770..3245902,3338858..3339122,3358307..3358501,3380358..3380913,3393990..3394162,3408888..3409004,3409559..3409593,3549771..3549883,3707127..3707263,3859309..3859430))
location: region:2984676-3859430:-1
so has part: feature:3859309-3859430:-1:exon
so has part: feature:3707127-3707263:-1:exon
so has part: feature:3549771-3549883:-1:exon
so has part: feature:3409559-3409593:-1:exon
so has part: feature:3408888-3409004:-1:exon
so has part: feature:3393990-3394162:-1:exon
so has part: feature:3380358-3380913:-1:exon
so has part: feature:3358307-3358501:-1:exon
so has part: feature:3338858-3339122:-1:exon
so has part: feature:3245770-3245902:-1:exon
so has part: feature:3216154-3216367:-1:exon
so has part: feature:3174667-3174850:-1:exon
so has part: feature:3124687-3124804:-1:exon
so has part: feature:3118380-3118565:-1:exon
so has part: feature:3098823-3098996:-1:exon
so has part: feature:3084512-3084586:-1:exon
so has part: feature:3083343-3083493:-1:exon
so has part: feature:3033022-3033232:-1:exon
so has part: feature:3027321-3027405:-1:exon
so has part: feature:3002827-3002953:-1:exon
so has part: feature:2998726-2998857:-1:exon
so has part: feature:2993014-2993087:-1:exon
so has part: feature:2984676-2986432:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3859309-3859430:-1:exon

position:3859309:-1
position: 3859309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3707127-3707263:-1:exon

position:3707127:-1
position: 3707127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3707263:-1
position: 3707263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3549771-3549883:-1:exon

position:3549771:-1
position: 3549771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3549883:-1
position: 3549883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3409559-3409593:-1:exon

position:3409559:-1
position: 3409559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3409593:-1
position: 3409593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3408888-3409004:-1:exon

position:3408888:-1
position: 3408888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3409004:-1
position: 3409004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3393990-3394162:-1:exon

position:3393990:-1
position: 3393990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3394162:-1
position: 3394162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3380358-3380913:-1:exon

position:3380358:-1
position: 3380358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3380913:-1
position: 3380913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3358307-3358501:-1:exon

position:3358307:-1
position: 3358307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3358501:-1
position: 3358501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3338858-3339122:-1:exon

position:3338858:-1
position: 3338858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3339122:-1
position: 3339122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3245770-3245902:-1:exon

position:3245770:-1
position: 3245770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3245902:-1
position: 3245902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3216154-3216367:-1:exon

position:3216154:-1
position: 3216154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3216367:-1
position: 3216367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3174667-3174850:-1:exon

position:3174667:-1
position: 3174667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3174850:-1
position: 3174850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3124687-3124804:-1:exon

position:3124687:-1
position: 3124687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3124804:-1
position: 3124804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3118380-3118565:-1:exon

position:3118380:-1
position: 3118380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3118565:-1
position: 3118565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3098823-3098996:-1:exon

position:3098823:-1
position: 3098823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3098996:-1
position: 3098996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3084512-3084586:-1:exon

position:3084512:-1
position: 3084512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3084586:-1
position: 3084586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3083343-3083493:-1:exon

position:3083343:-1
position: 3083343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3083493:-1
position: 3083493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3033022-3033232:-1:exon

position:3033022:-1
position: 3033022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3033232:-1
position: 3033232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3027321-3027405:-1:exon

position:3027321:-1
position: 3027321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3027405:-1
position: 3027405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3002827-3002953:-1:exon

position:3002827:-1
position: 3002827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3002953:-1
position: 3002953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2998726-2998857:-1:exon

position:2998726:-1
position: 2998726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2998857:-1
position: 2998857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2993014-2993087:-1:exon

position:2993014:-1
position: 2993014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2993087:-1
position: 2993087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2984676-2986432:-1:exon

position:2986432:-1
position: 2986432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ctnnd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Ctnnd2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: catenin delta-2
translation: MFARKQSGAAPFGAMPVPDQPSSASEKTSSLSPGLNTSNGDGSETETTSAILASVKEQELQFERLTRELEAERQIVASQLERCKLGSDTGSMSSISSAGEQFHWQTQDGQKDIEDELTTGLELVDSCIRSLQESGILDPQDYSTSERPSLLSQSALQLNSKPEGSFQYPASYHSNQTLALGDTAPSQLPARSTQARAAAQSFSQGTTGRAGHLAGSEPAPPPPPPREPFAPSLGSAFHLPDAPPAAAALYYSSSTLPAPPRGGSPLTTTQGGSPTKLQRGGSAPEGAAYAAPRGSSPKQSPSRLAKSYSTSSPINIVVSSAGLSPIRVTSPPTVQSTISSSPIHQLSSTIGTYATLSPTKRLVHASEQYSKHSQELYATATLQRPGSLAAGSRASYSSQHGHLGPELRALQSPEHHIDPIYEDRVYQKPPMRSLSQSQGDPLPPAHTGTFRTSTAPSSPGVDSVPLQRTGSQHGPQNAAAAAAATFQRASYAAGPASNYADPYRQLQYCPSVDSPYSKSGPALPPEGTLARSPSIDSIQKDPREFGWRDPELPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKANDDNKITLKNCGGIPALVRLLRKTTDLEIRELVTGVLWNLSSCDALKMPIIQDALAVLTNAVIIPHSGWENSPLQDDRKIQLHSSQVLRNATGCLRNVSSAGEEARRRMRECDGLTDALLYVIQSALGSSEIDSKTVENCVCILRNLSYRLAAETSQGQHMGTDELDGLLCGEANGKDAESSGCWGKKKKKKKSQDQWDGVGPLPDCAEPPKGIQMLWHPSIVKPYLTLLSECSNPDTLEGAAGALQNLAAGSWKGWAEDVAGMAYALRSLPEGAPCLPQWSVYIRAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMALDVRNKELIGKYAMRDLVHRLPGGNNSNNAGSKAMSDDTVTAVCCTLHEVITKNMENAKALRDAGGIEKLVGISKSKGDKHSPKVVKAASQVLNSMWQYRDLRSLYKKDGWSQYHFVASSSTIERDRQRPYSSSRTPSISPVRVSPNNRSASAPASPREMISLKERKTDYESTGNNATYHGTKGEHTSRKDAMTAQNTGVSTLYRNSYGAPAEDIKHNQVSAQPVPQEPSRKDYETYQPFXNSTRNYDESFFEDQVHHRPPAGEYTMHLGLKSTGNYVDFYSAARPYSELNYETSHYPASPDSWV
SIO_010081: Ctnnd2
subclass of: SO_0000673
so part of: Ctnnd2
location: complement(join(2986173..2986432,2993014..2993087,2998726..2998857,3002827..3002953,3027321..3027405,3033022..3033232,3083343..3083493,3084512..3084586,3098823..3098996,3118380..3118565,3124687..3124804,3174667..3174850,3216154..3216367,3245770..3245902,3338858..3339122,3358307..3358501,3380358..3380913,3393990..3394162,3408888..3409004,3409559..3409593,3549771..3549883,3707127..3707263,3859309..3859345))
location: region:2986173-3859345:-1
so has part: feature:3859309-3859345:-1:exon
so has part: feature:3707127-3707263:-1:exon
so has part: feature:3549771-3549883:-1:exon
so has part: feature:3409559-3409593:-1:exon
so has part: feature:3408888-3409004:-1:exon
so has part: feature:3393990-3394162:-1:exon
so has part: feature:3380358-3380913:-1:exon
so has part: feature:3358307-3358501:-1:exon
so has part: feature:3338858-3339122:-1:exon
so has part: feature:3245770-3245902:-1:exon
so has part: feature:3216154-3216367:-1:exon
so has part: feature:3174667-3174850:-1:exon
so has part: feature:3124687-3124804:-1:exon
so has part: feature:3118380-3118565:-1:exon
so has part: feature:3098823-3098996:-1:exon
so has part: feature:3084512-3084586:-1:exon
so has part: feature:3083343-3083493:-1:exon
so has part: feature:3033022-3033232:-1:exon
so has part: feature:3027321-3027405:-1:exon
so has part: feature:3002827-3002953:-1:exon
so has part: feature:2998726-2998857:-1:exon
so has part: feature:2993014-2993087:-1:exon
so has part: feature:2986173-2986432:-1:exon

XP_028737877.1
type: Protein
SIO_000068: ncbiprotein

position:2986173:-1
position: 2986173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3859345:-1
position: 3859345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3859309-3859345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3707127-3707263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3549771-3549883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3409559-3409593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3408888-3409004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3393990-3394162:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3380358-3380913:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3358307-3358501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3338858-3339122:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3245770-3245902:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3216154-3216367:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3174667-3174850:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3124687-3124804:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3118380-3118565:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3098823-3098996:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3084512-3084586:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3083343-3083493:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3033022-3033232:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3027321-3027405:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3002827-3002953:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2998726-2998857:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2993014-2993087:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2986173-2986432:-1:exon

LOC114701848
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114701848
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3289290..3289408
location: region:3289290-3289408:1
so has part: feature:3289290-3289408:1:exon
subclass of: SO_0000573

114701848
type: Gene
SIO_000068: ncbigene

position:3289290:1
position: 3289290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3289408:1
position: 3289408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3289290-3289408:1:exon

LOC114701848
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 10041
gene: LOC114701848
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003735885.1
SIO_010081: LOC114701848
subclass of: SO_0000673
so part of: LOC114701848
location: 3289290..3289408
location: region:3289290-3289408:1
so has part: feature:3289290-3289408:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3289290-3289408:1:exon

LOC114701833
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114701833
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4570755..4571539)
location: region:4570755-4571539:-1
so has part: feature:4570755-4571539:-1:exon
subclass of: SO_0000010

114701833
type: Gene
SIO_000068: ncbigene

position:4570755:-1
position: 4570755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4571539:-1
position: 4571539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4570755-4571539:-1:exon

LOC114701833
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114701833
product: dnaJ homolog subfamily B member 6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_028882030.2
SIO_010081: LOC114701833
subclass of: SO_0000673
so part of: LOC114701833
location: complement(4570755..4571539)
location: region:4570755-4571539:-1
so has part: feature:4570755-4571539:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4570755-4571539:-1:exon

LOC114701833
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114701833
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(4571105..4571107),aa:OTHER)
product: LOW QUALITY PROTEIN: dnaJ homolog subfamily B member 6-like
translation: MVDYYEVLGVQRHASPEDIKKAYRKQALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDVFEDPFDDFFGNXRGPRGSRNRGTGSFFSAFSGFPPFGGGFPAFDTGFTPFGSLGHGGITSFSSASFGGSGMGNFKSISTSTKIVNGKKITTKRIVENGQERVEVEEDGQLKSLTINGKEHLLRLDNK
SIO_010081: LOC114701833
subclass of: SO_0000673
so part of: LOC114701833
location: complement(4570757..4571485)
location: region:4570757-4571485:-1
so has part: feature:4570757-4571485:-1:exon

XP_028737863.1
type: Protein
SIO_000068: ncbiprotein

position:4570757:-1
position: 4570757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4571485:-1
position: 4571485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4570757-4571485:-1:exon

LOC114701846
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114701846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4807449..4808406
location: region:4807449-4808406:1
so has part: feature:4807449-4808406:1:exon

114701846
type: Gene
SIO_000068: ncbigene

position:4807449:1
position: 4807449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4808406:1
position: 4808406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4807449-4808406:1:exon

LOC114701846
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114701846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC114701846
subclass of: SO_0000673
so part of: LOC114701846
location: 4807449..4808406
location: region:4807449-4808406:1
so has part: feature:4807449-4808406:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4807449-4808406:1:exon

Dnah5
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Dnah5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5477991..5710363)
location: region:5477991-5710363:-1
so has part: feature:5477991-5710363:-1:exon
subclass of: SO_0000010

114692440
type: Gene
SIO_000068: ncbigene

position:5477991:-1
position: 5477991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5710363:-1
position: 5710363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5477991-5710363:-1:exon

Dnah5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Dnah5
product: dynein axonemal heavy chain 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_028868160.2
SIO_010081: Dnah5
subclass of: SO_0000673
so part of: Dnah5
location: complement(join(5477991..5480787,5490853..5491084,5491503..5491655,5496877..5497089,5498608..5498823,5500571..5500774,5501535..5501740,5503464..5503683,5504720..5504965,5509414..5509563,5511330..5511451,5519137..5519327,5519790..5519904,5520850..5521093,5530460..5530642,5531451..5531606,5532195..5532511,5533072..5533207,5537257..5537394,5538802..5538981,5543059..5543262,5547305..5547481,5547629..5547743,5549752..5549983,5554426..5554693,5555167..5555320,5559626..5559756,5565167..5565339,5566504..5566702,5569141..5569364,5570681..5570894,5571433..5571555,5582351..5582485,5583202..5583344,5584777..5584978,5585555..5585731,5590027..5590268,5593260..5593406,5596928..5597081,5599189..5599296,5600475..5600609,5603807..5604001,5604338..5604525,5605209..5605387,5614012..5614184,5615496..5615720,5616445..5616657,5620546..5620702,5625519..5625682,5627860..5628013,5629559..5629758,5631282..5631522,5633064..5633302,5633600..5633662,5634800..5635018,5638052..5638287,5639034..5639235,5641726..5641859,5647176..5647263,5647354..5647544,5650273..5650434,5651028..5651190,5653879..5654024,5658377..5658548,5662719..5662925,5664038..5664359,5664863..5664948,5669325..5669432,5673186..5673404,5674483..5674602,5676777..5676884,5677570..5677683,5678971..5679147,5680329..5680466,5682621..5682842,5683551..5683711,5690311..5690395,5694879..5695013,5709821..5710363))
location: region:5477991-5710363:-1
so has part: feature:5709821-5710363:-1:exon
so has part: feature:5694879-5695013:-1:exon
so has part: feature:5690311-5690395:-1:exon
so has part: feature:5683551-5683711:-1:exon
so has part: feature:5682621-5682842:-1:exon
so has part: feature:5680329-5680466:-1:exon
so has part: feature:5678971-5679147:-1:exon
so has part: feature:5677570-5677683:-1:exon
so has part: feature:5676777-5676884:-1:exon
so has part: feature:5674483-5674602:-1:exon
so has part: feature:5673186-5673404:-1:exon
so has part: feature:5669325-5669432:-1:exon
so has part: feature:5664863-5664948:-1:exon
so has part: feature:5664038-5664359:-1:exon
so has part: feature:5662719-5662925:-1:exon
so has part: feature:5658377-5658548:-1:exon
so has part: feature:5653879-5654024:-1:exon
so has part: feature:5651028-5651190:-1:exon
so has part: feature:5650273-5650434:-1:exon
so has part: feature:5647354-5647544:-1:exon
so has part: feature:5647176-5647263:-1:exon
so has part: feature:5641726-5641859:-1:exon
so has part: feature:5639034-5639235:-1:exon
so has part: feature:5638052-5638287:-1:exon
so has part: feature:5634800-5635018:-1:exon
so has part: feature:5633600-5633662:-1:exon
so has part: feature:5633064-5633302:-1:exon
so has part: feature:5631282-5631522:-1:exon
so has part: feature:5629559-5629758:-1:exon
so has part: feature:5627860-5628013:-1:exon
so has part: feature:5625519-5625682:-1:exon
so has part: feature:5620546-5620702:-1:exon
so has part: feature:5616445-5616657:-1:exon
so has part: feature:5615496-5615720:-1:exon
so has part: feature:5614012-5614184:-1:exon
so has part: feature:5605209-5605387:-1:exon
so has part: feature:5604338-5604525:-1:exon
so has part: feature:5603807-5604001:-1:exon
so has part: feature:5600475-5600609:-1:exon
so has part: feature:5599189-5599296:-1:exon
so has part: feature:5596928-5597081:-1:exon
so has part: feature:5593260-5593406:-1:exon
so has part: feature:5590027-5590268:-1:exon
so has part: feature:5585555-5585731:-1:exon
so has part: feature:5584777-5584978:-1:exon
so has part: feature:5583202-5583344:-1:exon
so has part: feature:5582351-5582485:-1:exon
so has part: feature:5571433-5571555:-1:exon
so has part: feature:5570681-5570894:-1:exon
so has part: feature:5569141-5569364:-1:exon
so has part: feature:5566504-5566702:-1:exon
so has part: feature:5565167-5565339:-1:exon
so has part: feature:5559626-5559756:-1:exon
so has part: feature:5555167-5555320:-1:exon
so has part: feature:5554426-5554693:-1:exon
so has part: feature:5549752-5549983:-1:exon
so has part: feature:5547629-5547743:-1:exon
so has part: feature:5547305-5547481:-1:exon
so has part: feature:5543059-5543262:-1:exon
so has part: feature:5538802-5538981:-1:exon
so has part: feature:5537257-5537394:-1:exon
so has part: feature:5533072-5533207:-1:exon
so has part: feature:5532195-5532511:-1:exon
so has part: feature:5531451-5531606:-1:exon
so has part: feature:5530460-5530642:-1:exon
so has part: feature:5520850-5521093:-1:exon
so has part: feature:5519790-5519904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5709821-5710363:-1:exon

position:5709821:-1
position: 5709821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5694879-5695013:-1:exon

position:5694879:-1
position: 5694879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5695013:-1
position: 5695013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5690311-5690395:-1:exon

position:5690311:-1
position: 5690311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5690395:-1
position: 5690395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5683551-5683711:-1:exon

position:5683551:-1
position: 5683551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5683711:-1
position: 5683711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5682621-5682842:-1:exon

position:5682621:-1
position: 5682621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5682842:-1
position: 5682842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5680329-5680466:-1:exon

position:5680329:-1
position: 5680329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5680466:-1
position: 5680466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5678971-5679147:-1:exon

position:5678971:-1
position: 5678971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5679147:-1
position: 5679147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5677570-5677683:-1:exon

position:5677570:-1
position: 5677570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5677683:-1
position: 5677683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5676777-5676884:-1:exon

position:5676777:-1
position: 5676777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5676884:-1
position: 5676884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5674483-5674602:-1:exon

position:5674483:-1
position: 5674483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5674602:-1
position: 5674602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5673186-5673404:-1:exon

position:5673186:-1
position: 5673186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5673404:-1
position: 5673404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5669325-5669432:-1:exon

position:5669325:-1
position: 5669325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5669432:-1
position: 5669432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5664863-5664948:-1:exon

position:5664863:-1
position: 5664863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5664948:-1
position: 5664948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5664038-5664359:-1:exon

position:5664038:-1
position: 5664038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5664359:-1
position: 5664359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5662719-5662925:-1:exon

position:5662719:-1
position: 5662719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5662925:-1
position: 5662925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5658377-5658548:-1:exon

position:5658377:-1
position: 5658377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5658548:-1
position: 5658548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5653879-5654024:-1:exon

position:5653879:-1
position: 5653879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5654024:-1
position: 5654024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5651028-5651190:-1:exon

position:5651028:-1
position: 5651028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5651190:-1
position: 5651190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5650273-5650434:-1:exon

position:5650273:-1
position: 5650273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5650434:-1
position: 5650434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5647354-5647544:-1:exon

position:5647354:-1
position: 5647354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5647544:-1
position: 5647544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5647176-5647263:-1:exon

position:5647176:-1
position: 5647176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5647263:-1
position: 5647263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5641726-5641859:-1:exon

position:5641726:-1
position: 5641726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5641859:-1
position: 5641859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5639034-5639235:-1:exon

position:5639034:-1
position: 5639034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5639235:-1
position: 5639235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5638052-5638287:-1:exon

position:5638052:-1
position: 5638052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5638287:-1
position: 5638287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:5634800-5635018:-1:exon

position:5634800:-1
position: 5634800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5635018:-1
position: 5635018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:5633600-5633662:-1:exon

position:5633600:-1
position: 5633600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5633662:-1
position: 5633662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:5633064-5633302:-1:exon

position:5633064:-1
position: 5633064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5633302:-1
position: 5633302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:5631282-5631522:-1:exon

position:5631282:-1
position: 5631282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5631522:-1
position: 5631522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:5629559-5629758:-1:exon

position:5629559:-1
position: 5629559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5629758:-1
position: 5629758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:5627860-5628013:-1:exon

position:5627860:-1
position: 5627860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5628013:-1
position: 5628013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:5625519-5625682:-1:exon

position:5625519:-1
position: 5625519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5625682:-1
position: 5625682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:5620546-5620702:-1:exon

position:5620546:-1
position: 5620546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5620702:-1
position: 5620702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:5616445-5616657:-1:exon

position:5616445:-1
position: 5616445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5616657:-1
position: 5616657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:5615496-5615720:-1:exon

position:5615496:-1
position: 5615496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5615720:-1
position: 5615720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:5614012-5614184:-1:exon

position:5614012:-1
position: 5614012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5614184:-1
position: 5614184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:5605209-5605387:-1:exon

position:5605209:-1
position: 5605209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5605387:-1
position: 5605387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:5604338-5604525:-1:exon

position:5604338:-1
position: 5604338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5604525:-1
position: 5604525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:5603807-5604001:-1:exon

position:5603807:-1
position: 5603807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5604001:-1
position: 5604001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:5600475-5600609:-1:exon

position:5600475:-1
position: 5600475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5600609:-1
position: 5600609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:5599189-5599296:-1:exon

position:5599189:-1
position: 5599189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5599296:-1
position: 5599296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:5596928-5597081:-1:exon

position:5596928:-1
position: 5596928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5597081:-1
position: 5597081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:5593260-5593406:-1:exon

position:5593260:-1
position: 5593260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5593406:-1
position: 5593406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:5590027-5590268:-1:exon

position:5590027:-1
position: 5590027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5590268:-1
position: 5590268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:5585555-5585731:-1:exon

position:5585555:-1
position: 5585555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5585731:-1
position: 5585731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:5584777-5584978:-1:exon

position:5584777:-1
position: 5584777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5584978:-1
position: 5584978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:5583202-5583344:-1:exon

position:5583202:-1
position: 5583202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5583344:-1
position: 5583344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:5582351-5582485:-1:exon

position:5582351:-1
position: 5582351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5582485:-1
position: 5582485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:5571433-5571555:-1:exon

position:5571433:-1
position: 5571433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5571555:-1
position: 5571555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:5570681-5570894:-1:exon

position:5570681:-1
position: 5570681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5570894:-1
position: 5570894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:5569141-5569364:-1:exon

position:5569141:-1
position: 5569141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5569364:-1
position: 5569364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:5566504-5566702:-1:exon

position:5566504:-1
position: 5566504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5566702:-1
position: 5566702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:5565167-5565339:-1:exon

position:5565167:-1
position: 5565167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5565339:-1
position: 5565339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:5559626-5559756:-1:exon

position:5559626:-1
position: 5559626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5559756:-1
position: 5559756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:5555167-5555320:-1:exon

position:5555167:-1
position: 5555167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5555320:-1
position: 5555320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:5554426-5554693:-1:exon

position:5554426:-1
position: 5554426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5554693:-1
position: 5554693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:5549752-5549983:-1:exon

position:5549752:-1
position: 5549752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5549983:-1
position: 5549983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:5547629-5547743:-1:exon

position:5547629:-1
position: 5547629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5547743:-1
position: 5547743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:5547305-5547481:-1:exon

position:5547305:-1
position: 5547305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5547481:-1
position: 5547481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 59
SIO_000628: feature:5543059-5543262:-1:exon

position:5543059:-1
position: 5543059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5543262:-1
position: 5543262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:5538802-5538981:-1:exon

position:5538802:-1
position: 5538802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5538981:-1
position: 5538981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 61
SIO_000628: feature:5537257-5537394:-1:exon

position:5537257:-1
position: 5537257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5537394:-1
position: 5537394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 62
SIO_000628: feature:5533072-5533207:-1:exon

position:5533072:-1
position: 5533072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5533207:-1
position: 5533207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 63
SIO_000628: feature:5532195-5532511:-1:exon

position:5532195:-1
position: 5532195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5532511:-1
position: 5532511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 64
SIO_000628: feature:5531451-5531606:-1:exon

position:5531451:-1
position: 5531451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5531606:-1
position: 5531606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 65
SIO_000628: feature:5530460-5530642:-1:exon

position:5530460:-1
position: 5530460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5530642:-1
position: 5530642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 66
SIO_000628: feature:5520850-5521093:-1:exon

position:5520850:-1
position: 5520850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5521093:-1
position: 5521093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 67
SIO_000628: feature:5519790-5519904:-1:exon

position:5519790:-1
position: 5519790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5519904:-1
position: 5519904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 68
SIO_000628: feature:5519137-5519327:-1:exon

position:5519137:-1
position: 5519137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5519327:-1
position: 5519327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 69
SIO_000628: feature:5511330-5511451:-1:exon

position:5511330:-1
position: 5511330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5511451:-1
position: 5511451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 70
SIO_000628: feature:5509414-5509563:-1:exon

position:5509414:-1
position: 5509414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5509563:-1
position: 5509563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 71
SIO_000628: feature:5504720-5504965:-1:exon

position:5504720:-1
position: 5504720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5504965:-1
position: 5504965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 72
SIO_000628: feature:5503464-5503683:-1:exon

position:5503464:-1
position: 5503464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5503683:-1
position: 5503683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 73
SIO_000628: feature:5501535-5501740:-1:exon

position:5501535:-1
position: 5501535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5501740:-1
position: 5501740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 74
SIO_000628: feature:5500571-5500774:-1:exon

position:5500571:-1
position: 5500571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5500774:-1
position: 5500774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 75
SIO_000628: feature:5498608-5498823:-1:exon

position:5498608:-1
position: 5498608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5498823:-1
position: 5498823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 76
SIO_000628: feature:5496877-5497089:-1:exon

position:5496877:-1
position: 5496877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5497089:-1
position: 5497089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 77
SIO_000628: feature:5491503-5491655:-1:exon

position:5491503:-1
position: 5491503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5491655:-1
position: 5491655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 78
SIO_000628: feature:5490853-5491084:-1:exon

position:5490853:-1
position: 5490853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5491084:-1
position: 5491084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 79
SIO_000628: feature:5477991-5480787:-1:exon

position:5480787:-1
position: 5480787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Dnah5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Dnah5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein heavy chain 5, axonemal
translation: MFRIGRRQLWKQSVSRVLTQRLKEEKEAKRARLDGRHDYLFAIVASCLDLSKLEVEDALLEGNQIERIDQLFLAGGLRHLMFYYQDVEGAEAGPFGSSGGVSPVSGKLKKPKVFVTEGKDVALTGVCVFFIKSDPSKAITAENIHREVSFNTLDTADGGLLNSVRRLLADIFIPALRASSHGWSELQGLQDASSIRQEFLSSLEGFVGILSGAQESLREKVNLQKCDIFELTSLKEPVDYLALASNPETVEKAECCMKVWIKQTEQILAENNQLRKEADDVGPRAELEHWKKRLSKFNYLLDQLKSPEVKAVLAMLAAAKSKLLKAWRETDIRITDAANEAKDNVKYLYTLEKCCDPLYSSDPITMIDAIPTLINAIKMIYSISQYYNTSEKITSLFVKVTNQMISACKAHITNNGTATIWSQPQDLVMQKISSAIQLKQGYQSCFHETKQKLKQSPSEKQFDFSEMYIFGKFETFHRRLAKIMDIFSTFKTYSVLQDSKIEGLEDMVTKYQDIVASIKKKEYNFLDQRKTDFDQDYEEFCKRTNDLHHELQKFMDITFEKIQSTRQALNTLKKFERLNIPNLGIEEKYQVIFQNFGADIDMISKLYTRQKYDPPLARNQPPIAGKILWARQLFHRLEQPMQLFQQHPFVLRTAEAKPVIRSYNRIAKVLLEFEVLYHRAWLQQIEEIHIGLEASLLVKAPGTGELFVNFDPQILILFRETECMSQMGLPVSPFAAALFQKRNVYKKNFSDMKMMLSEYQRVKSKMPPPIEQLMVPHLARVDEALQPGLAALTWTSLNIGTYLENAFAKIKDLELLLDRVNDLIEFRINAILEEMSSMPLCQLPQEDPLTCEEFLQMTKDLCVNGAQRLHFKSSLVEEAANELINMLLDVDVQAEEAGEKVSPKNAGSNGDTSATTRKKKESEMLEEARELLSHFNHQNADALLKVTRNTLEAIRRRIHLSHMVNFRDSNNASKMKQNHLPIFRASITLAIPNIAMTPALEDIQQTLNKAVECIISVPKGVRQWSIELLSMRKLHERKMAALKNSEDSDSDVEAEESELQETLEIASVNLPIPVHTQNYYKNISDNKEIVKLVSVLSTIINSTKKEVITSMDRFKCYNHIWQKEKEETIMSFIAQNPLLSEFESRILYFQRLEQEINAEPEYIRVGSIALYTADLKFSLMAETKAWMVVIGRHCNKKYRSEMESIFAVVEEFQKKLNRPIKDLDDIRIAMVALKEIREQQISTDFQVGPIEESYALLNKYGLLVAKEEMDKVDTLRYAWEKLLARASDLQNELVSLQPSFRKELIGVVEVFLQDCQQFYLDYDLNGPMASGLKPQEASDRLIMFQNQFDNIYRKYITYTGGEELFGLPVTQYPQLLEIKKQLNLLQKIYSLYNSVIETVNSYQDSLWSEVNIEKINNELLEFQNRCRKLPRALKDWQAFLDLKKTIDDFSECCPLLEYMASKAMMERHWQRITALTGHSLDVGNESFKLRNIMEAPLLKYKEEIEDICISAVKERDIEQKLKQVISEWDNKTLTFSSFKTRGELLLRGDSTSEVITSMEDSLMLLSSLLSNRYNMPFKAQIQKWVQCLSNSTDIIENWMTVQNLWIYLEAVFVGGDIAKQLPKEAKRFSNIDKSWVKIMTRAHEISNVVQCCVGDETMGQLLPHLLDQLEICQKSLTGYLEKKRLCFPRFFFVSDPALLEILGQASDSHTIQAHLLNVFDNIKTVKFHDKIYDRILSISSREGETIELDKPVMAEGNVEVWLNSLLEESQSSLHLVIRQAAANIQETGFQLIEFLSSFPAQVGLLGIQMIWTRDSEEALRNAKFDKKIMQKTNQSFLELLNTLIDITTKDLSSMERVKYETLITIHVHQRDIFDDLCHMHVKSPADFEWLKQCRFYFKEDSDKMMIHITDVAFIYQNEFLGCTDRLVITPLTDRCYITLAQALGMSMGGAPAGPAGTGKTETTKDMGRCLGKYVVVFNCSDQMDFRGLGRIFKGLAQSGS…
SIO_010081: Dnah5
subclass of: SO_0000673
so part of: Dnah5
location: complement(join(5480636..5480787,5490853..5491084,5491503..5491655,5496877..5497089,5498608..5498823,5500571..5500774,5501535..5501740,5503464..5503683,5504720..5504965,5509414..5509563,5511330..5511451,5519137..5519327,5519790..5519904,5520850..5521093,5530460..5530642,5531451..5531606,5532195..5532511,5533072..5533207,5537257..5537394,5538802..5538981,5543059..5543262,5547305..5547481,5547629..5547743,5549752..5549983,5554426..5554693,5555167..5555320,5559626..5559756,5565167..5565339,5566504..5566702,5569141..5569364,5570681..5570894,5571433..5571555,5582351..5582485,5583202..5583344,5584777..5584978,5585555..5585731,5590027..5590268,5593260..5593406,5596928..5597081,5599189..5599296,5600475..5600609,5603807..5604001,5604338..5604525,5605209..5605387,5614012..5614184,5615496..5615720,5616445..5616657,5620546..5620702,5625519..5625682,5627860..5628013,5629559..5629758,5631282..5631522,5633064..5633302,5633600..5633662,5634800..5635018,5638052..5638287,5639034..5639235,5641726..5641859,5647176..5647263,5647354..5647544,5650273..5650434,5651028..5651190,5653879..5654024,5658377..5658548,5662719..5662925,5664038..5664359,5664863..5664948,5669325..5669432,5673186..5673404,5674483..5674602,5676777..5676884,5677570..5677683,5678971..5679147,5680329..5680466,5682621..5682842,5683551..5683711,5690311..5690395,5694879..5695013,5709821..5709877))
location: region:5480636-5709877:-1
so has part: feature:5709821-5709877:-1:exon
so has part: feature:5694879-5695013:-1:exon
so has part: feature:5690311-5690395:-1:exon
so has part: feature:5683551-5683711:-1:exon
so has part: feature:5682621-5682842:-1:exon
so has part: feature:5680329-5680466:-1:exon
so has part: feature:5678971-5679147:-1:exon
so has part: feature:5677570-5677683:-1:exon
so has part: feature:5676777-5676884:-1:exon
so has part: feature:5674483-5674602:-1:exon
so has part: feature:5673186-5673404:-1:exon
so has part: feature:5669325-5669432:-1:exon
so has part: feature:5664863-5664948:-1:exon
so has part: feature:5664038-5664359:-1:exon
so has part: feature:5662719-5662925:-1:exon
so has part: feature:5658377-5658548:-1:exon
so has part: feature:5653879-5654024:-1:exon
so has part: feature:5651028-5651190:-1:exon
so has part: feature:5650273-5650434:-1:exon
so has part: feature:5647354-5647544:-1:exon
so has part: feature:5647176-5647263:-1:exon
so has part: feature:5641726-5641859:-1:exon
so has part: feature:5639034-5639235:-1:exon
so has part: feature:5638052-5638287:-1:exon
so has part: feature:5634800-5635018:-1:exon
so has part: feature:5633600-5633662:-1:exon
so has part: feature:5633064-5633302:-1:exon
so has part: feature:5631282-5631522:-1:exon
so has part: feature:5629559-5629758:-1:exon
so has part: feature:5627860-5628013:-1:exon
so has part: feature:5625519-5625682:-1:exon
so has part: feature:5620546-5620702:-1:exon
so has part: feature:5616445-5616657:-1:exon
so has part: feature:5615496-5615720:-1:exon
so has part: feature:5614012-5614184:-1:exon
so has part: feature:5605209-5605387:-1:exon
so has part: feature:5604338-5604525:-1:exon
so has part: feature:5603807-5604001:-1:exon
so has part: feature:5600475-5600609:-1:exon
so has part: feature:5599189-5599296:-1:exon
so has part: feature:5596928-5597081:-1:exon
so has part: feature:5593260-5593406:-1:exon
so has part: feature:5590027-5590268:-1:exon
so has part: feature:5585555-5585731:-1:exon
so has part: feature:5584777-5584978:-1:exon
so has part: feature:5583202-5583344:-1:exon
so has part: feature:5582351-5582485:-1:exon
so has part: feature:5571433-5571555:-1:exon
so has part: feature:5570681-5570894:-1:exon
so has part: feature:5569141-5569364:-1:exon
so has part: feature:5566504-5566702:-1:exon
so has part: feature:5565167-5565339:-1:exon
so has part: feature:5559626-5559756:-1:exon
so has part: feature:5555167-5555320:-1:exon
so has part: feature:5554426-5554693:-1:exon
so has part: feature:5549752-5549983:-1:exon
so has part: feature:5547629-5547743:-1:exon
so has part: feature:5547305-5547481:-1:exon
so has part: feature:5543059-5543262:-1:exon
so has part: feature:5538802-5538981:-1:exon
so has part: feature:5537257-5537394:-1:exon
so has part: feature:5533072-5533207:-1:exon
so has part: feature:5532195-5532511:-1:exon
so has part: feature:5531451-5531606:-1:exon
so has part: feature:5530460-5530642:-1:exon
so has part: feature:5520850-5521093:-1:exon

XP_028723993.1
type: Protein
SIO_000068: ncbiprotein

position:5480636:-1
position: 5480636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5709877:-1
position: 5709877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5709821-5709877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5694879-5695013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5690311-5690395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5683551-5683711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5682621-5682842:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5680329-5680466:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5678971-5679147:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5677570-5677683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5676777-5676884:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5674483-5674602:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5673186-5673404:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5669325-5669432:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5664863-5664948:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5664038-5664359:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5662719-5662925:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5658377-5658548:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5653879-5654024:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5651028-5651190:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5650273-5650434:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5647354-5647544:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5647176-5647263:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5641726-5641859:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5639034-5639235:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5638052-5638287:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5634800-5635018:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5633600-5633662:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5633064-5633302:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5631282-5631522:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5629559-5629758:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5627860-5628013:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5625519-5625682:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5620546-5620702:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5616445-5616657:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5615496-5615720:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5614012-5614184:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5605209-5605387:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:5604338-5604525:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:5603807-5604001:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:5600475-5600609:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:5599189-5599296:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:5596928-5597081:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:5593260-5593406:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:5590027-5590268:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:5585555-5585731:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:5584777-5584978:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:5583202-5583344:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:5582351-5582485:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:5571433-5571555:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:5570681-5570894:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:5569141-5569364:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:5566504-5566702:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:5565167-5565339:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:5559626-5559756:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:5555167-5555320:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:5554426-5554693:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:5549752-5549983:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:5547629-5547743:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:5547305-5547481:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:5543059-5543262:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:5538802-5538981:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:5537257-5537394:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:5533072-5533207:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:5532195-5532511:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:5531451-5531606:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:5530460-5530642:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:5520850-5521093:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:5519790-5519904:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:5519137-5519327:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:5511330-5511451:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:5509414-5509563:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:5504720-5504965:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:5503464-5503683:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:5501535-5501740:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:5500571-5500774:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:5498608-5498823:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:5496877-5497089:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:5491503-5491655:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:5490853-5491084:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:5480636-5480787:-1:exon

LOC114692461
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114692461
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5687071..5687176
location: region:5687071-5687176:1
so has part: feature:5687071-5687176:1:exon
subclass of: SO_0000623

114692461
type: Gene
SIO_000068: ncbigene

position:5687071:1
position: 5687071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5687176:1
position: 5687176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5687071-5687176:1:exon

LOC114692461
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: snRNA
gene: LOC114692461
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003734417.1
SIO_010081: LOC114692461
subclass of: SO_0000673
so part of: LOC114692461
location: 5687071..5687176
location: region:5687071-5687176:1
so has part: feature:5687071-5687176:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5687071-5687176:1:exon

Trio
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Trio
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5892494..6209835
location: region:5892494-6209835:1
so has part: feature:5892494-6209835:1:exon
subclass of: SO_0000010

114692441
type: Gene
SIO_000068: ncbigene

position:5892494:1
position: 5892494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6209835:1
position: 6209835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5892494-6209835:1:exon

Trio
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Trio
product: trio Rho guanine nucleotide exchange factor
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_028868161.2
SIO_010081: Trio
subclass of: SO_0000673
so part of: Trio
location: join(5892494..5892650,6003919..6003993,6008392..6008506,6017881..6018073,6020097..6020609,6022214..6022336,6025988..6026179,6035168..6035299,6043174..6043404,6051648..6051770,6060348..6060539,6075218..6075387,6076270..6076444,6080228..6080423,6081138..6081304,6083649..6083768,6085291..6085482,6085886..6086035,6087995..6088109,6092121..6092236,6096102..6096224,6102040..6102234,6102329..6102444,6103111..6103177,6103722..6103831,6104430..6104499,6105025..6105114,6107206..6107298,6109640..6109751,6111136..6111326,6113300..6113401,6117550..6117692,6118362..6118461,6130428..6130671,6164623..6164915,6165601..6165771,6168264..6168359,6170431..6170579,6172887..6172953,6174665..6174768,6180852..6180921,6182940..6183029,6184429..6184521,6185351..6185401,6185571..6185648,6186492..6186683,6189136..6189313,6190322..6191135,6194969..6195216,6196458..6196596,6197055..6197082,6197268..6197430,6197653..6197773,6203051..6203129,6205007..6205207,6206884..6207022,6207479..6209835)
location: region:5892494-6209835:1
so has part: feature:5892494-5892650:1:exon
so has part: feature:6003919-6003993:1:exon
so has part: feature:6008392-6008506:1:exon
so has part: feature:6017881-6018073:1:exon
so has part: feature:6020097-6020609:1:exon
so has part: feature:6022214-6022336:1:exon
so has part: feature:6025988-6026179:1:exon
so has part: feature:6035168-6035299:1:exon
so has part: feature:6043174-6043404:1:exon
so has part: feature:6051648-6051770:1:exon
so has part: feature:6060348-6060539:1:exon
so has part: feature:6075218-6075387:1:exon
so has part: feature:6076270-6076444:1:exon
so has part: feature:6080228-6080423:1:exon
so has part: feature:6081138-6081304:1:exon
so has part: feature:6083649-6083768:1:exon
so has part: feature:6085291-6085482:1:exon
so has part: feature:6085886-6086035:1:exon
so has part: feature:6087995-6088109:1:exon
so has part: feature:6092121-6092236:1:exon
so has part: feature:6096102-6096224:1:exon
so has part: feature:6102040-6102234:1:exon
so has part: feature:6102329-6102444:1:exon
so has part: feature:6103111-6103177:1:exon
so has part: feature:6103722-6103831:1:exon
so has part: feature:6104430-6104499:1:exon
so has part: feature:6105025-6105114:1:exon
so has part: feature:6107206-6107298:1:exon
so has part: feature:6109640-6109751:1:exon
so has part: feature:6111136-6111326:1:exon
so has part: feature:6113300-6113401:1:exon
so has part: feature:6117550-6117692:1:exon
so has part: feature:6118362-6118461:1:exon
so has part: feature:6130428-6130671:1:exon
so has part: feature:6164623-6164915:1:exon
so has part: feature:6165601-6165771:1:exon
so has part: feature:6168264-6168359:1:exon
so has part: feature:6170431-6170579:1:exon
so has part: feature:6172887-6172953:1:exon
so has part: feature:6174665-6174768:1:exon
so has part: feature:6180852-6180921:1:exon
so has part: feature:6182940-6183029:1:exon
so has part: feature:6184429-6184521:1:exon
so has part: feature:6185351-6185401:1:exon
so has part: feature:6185571-6185648:1:exon
so has part: feature:6186492-6186683:1:exon
so has part: feature:6189136-6189313:1:exon
so has part: feature:6190322-6191135:1:exon
so has part: feature:6194969-6195216:1:exon
so has part: feature:6196458-6196596:1:exon
so has part: feature:6197055-6197082:1:exon
so has part: feature:6197268-6197430:1:exon
so has part: feature:6197653-6197773:1:exon
so has part: feature:6203051-6203129:1:exon
so has part: feature:6205007-6205207:1:exon
so has part: feature:6206884-6207022:1:exon
so has part: feature:6207479-6209835:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5892494-5892650:1:exon

position:5892650:1
position: 5892650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6003919-6003993:1:exon

position:6003919:1
position: 6003919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6003993:1
position: 6003993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6008392-6008506:1:exon

position:6008392:1
position: 6008392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6008506:1
position: 6008506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6017881-6018073:1:exon

position:6017881:1
position: 6017881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6018073:1
position: 6018073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6020097-6020609:1:exon

position:6020097:1
position: 6020097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6020609:1
position: 6020609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6022214-6022336:1:exon

position:6022214:1
position: 6022214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6022336:1
position: 6022336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6025988-6026179:1:exon

position:6025988:1
position: 6025988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6026179:1
position: 6026179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6035168-6035299:1:exon

position:6035168:1
position: 6035168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6035299:1
position: 6035299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6043174-6043404:1:exon

position:6043174:1
position: 6043174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6043404:1
position: 6043404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6051648-6051770:1:exon

position:6051648:1
position: 6051648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6051770:1
position: 6051770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6060348-6060539:1:exon

position:6060348:1
position: 6060348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6060539:1
position: 6060539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6075218-6075387:1:exon

position:6075218:1
position: 6075218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6075387:1
position: 6075387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6076270-6076444:1:exon

position:6076270:1
position: 6076270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6076444:1
position: 6076444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6080228-6080423:1:exon

position:6080228:1
position: 6080228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6080423:1
position: 6080423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6081138-6081304:1:exon

position:6081138:1
position: 6081138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6081304:1
position: 6081304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6083649-6083768:1:exon

position:6083649:1
position: 6083649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6083768:1
position: 6083768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6085291-6085482:1:exon

position:6085291:1
position: 6085291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6085482:1
position: 6085482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6085886-6086035:1:exon

position:6085886:1
position: 6085886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6086035:1
position: 6086035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6087995-6088109:1:exon

position:6087995:1
position: 6087995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6088109:1
position: 6088109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6092121-6092236:1:exon

position:6092121:1
position: 6092121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6092236:1
position: 6092236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6096102-6096224:1:exon

position:6096102:1
position: 6096102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6096224:1
position: 6096224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6102040-6102234:1:exon

position:6102040:1
position: 6102040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6102234:1
position: 6102234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6102329-6102444:1:exon

position:6102329:1
position: 6102329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6102444:1
position: 6102444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6103111-6103177:1:exon

position:6103111:1
position: 6103111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6103177:1
position: 6103177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6103722-6103831:1:exon

position:6103722:1
position: 6103722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6103831:1
position: 6103831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:6104430-6104499:1:exon

position:6104430:1
position: 6104430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6104499:1
position: 6104499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:6105025-6105114:1:exon

position:6105025:1
position: 6105025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6105114:1
position: 6105114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:6107206-6107298:1:exon

position:6107206:1
position: 6107206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6107298:1
position: 6107298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:6109640-6109751:1:exon

position:6109640:1
position: 6109640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6109751:1
position: 6109751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:6111136-6111326:1:exon

position:6111136:1
position: 6111136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6111326:1
position: 6111326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:6113300-6113401:1:exon

position:6113300:1
position: 6113300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6113401:1
position: 6113401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:6117550-6117692:1:exon

position:6117550:1
position: 6117550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6117692:1
position: 6117692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:6118362-6118461:1:exon

position:6118362:1
position: 6118362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6118461:1
position: 6118461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:6130428-6130671:1:exon

position:6130428:1
position: 6130428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6130671:1
position: 6130671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:6164623-6164915:1:exon

position:6164623:1
position: 6164623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6164915:1
position: 6164915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:6165601-6165771:1:exon

position:6165601:1
position: 6165601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6165771:1
position: 6165771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:6168264-6168359:1:exon

position:6168264:1
position: 6168264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6168359:1
position: 6168359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:6170431-6170579:1:exon

position:6170431:1
position: 6170431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6170579:1
position: 6170579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:6172887-6172953:1:exon

position:6172887:1
position: 6172887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6172953:1
position: 6172953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:6174665-6174768:1:exon

position:6174665:1
position: 6174665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6174768:1
position: 6174768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:6180852-6180921:1:exon

position:6180852:1
position: 6180852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6180921:1
position: 6180921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:6182940-6183029:1:exon

position:6182940:1
position: 6182940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6183029:1
position: 6183029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:6184429-6184521:1:exon

position:6184429:1
position: 6184429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6184521:1
position: 6184521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:6185351-6185401:1:exon

position:6185351:1
position: 6185351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6185401:1
position: 6185401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:6185571-6185648:1:exon

position:6185571:1
position: 6185571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6185648:1
position: 6185648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:6186492-6186683:1:exon

position:6186492:1
position: 6186492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6186683:1
position: 6186683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:6189136-6189313:1:exon

position:6189136:1
position: 6189136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6189313:1
position: 6189313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:6190322-6191135:1:exon

position:6190322:1
position: 6190322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6191135:1
position: 6191135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:6194969-6195216:1:exon

position:6194969:1
position: 6194969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6195216:1
position: 6195216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:6196458-6196596:1:exon

position:6196458:1
position: 6196458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6196596:1
position: 6196596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:6197055-6197082:1:exon

position:6197055:1
position: 6197055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6197082:1
position: 6197082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:6197268-6197430:1:exon

position:6197268:1
position: 6197268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6197430:1
position: 6197430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:6197653-6197773:1:exon

position:6197653:1
position: 6197653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6197773:1
position: 6197773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:6203051-6203129:1:exon

position:6203051:1
position: 6203051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6203129:1
position: 6203129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:6205007-6205207:1:exon

position:6205007:1
position: 6205007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6205207:1
position: 6205207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:6206884-6207022:1:exon

position:6206884:1
position: 6206884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6207022:1
position: 6207022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:6207479-6209835:1:exon

position:6207479:1
position: 6207479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Trio
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Trio
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: triple functional domain protein
translation: MSGSSGGATAPAASSGPAAAASAAGSGCGGGAGEGAEEAAKDLADIAAFFRSGFRKNDEMKAMDVLPILKEKVAYLSGGRDKRGGPILTFPARSNHDRIRQEDLRRLISYLACIPSEEVCKRGFTVIVDMRGSKWDSIKPLLKILQESFPCCIHIALIIKPDNFWQKQRTNFGSSKFEFETNMVSLEGLTKVVDPSQLTPEFDGCLEYNHEEWIEIRVAFEDYISNAAHMLSRLEELQDILAKKELPQDLEGARNMIEEHSQLKKKVIKAPIEDLDLEGQKLLQRIQSSDSFPKKNSGSGNADLQNLLPKVSTMLDRLHSTRQHLHQMWHVRKLKLDQCFQLRLFEQDAEKMFDWITHNKGLFLNSYTEIGTSHPHAMELQTQHNHFAMNCMNVYVNINRIMSVANRLVESGHYASQQIKQIANQLEQEWKAFAAALDERSTLLDMSSIFHQKAEKYMSNVDSWCKACGEVDLPSELQDLEDAIHHHQGIYEHITLAYSEVSQDGKSLLDKLQRPLTPGSSDSLTASANYSKAVHHVLDVIHEVLHHQRQLENIWQHRKVRLHQRLQLCVFQQDVQQVLDWIENHGEAFLSKHTGVGKSLHRARALQKRHEDFEEVAQNTYTNADKLLEAAEQLAQTGECDPEEIYQAAHQLEDRIQDFVRRVEQRKILLDMSVSFHTHVKELWTWLEELQKELLDDVYAESVEAVQDLIKRFGQQQQTTLQVTVNVIKEGEDLIQQLRDSAISSNKTPHNSSINHIETVLQQLDEAQSQMEELFQERKIKLELFLQLRIFERDAIDIISDLESWNDELSQQMNDFDTEDLTIAEQRLQHHADKALTMNNLTFDVIHQGQDLLQYVNEVQASGVELLCDRDVDMATRVQDLLEFLHEKQQELDLAAEQHRKHLEQCVQLRHLQAEVKQVLGWIRNGESMLNAGLITASSLQEAEQLQREHEQFQHAIEKTHQSALQVQQKAEAMLQANHYDMDMIRDCAEKVASHWQQLMLKMEDRLKLVNASVAFYKTSEQVCSVLESLEQEYKREEDWCGGADKLGPNSETDHVTPMISKHLEQKEAFLKACTLARRNADVFLKYLHRNSVSMPGMVTHIKAPEQQVKNILNELFQRENRVLHYWTMRKRRLDQCQQYVVFERSAKQALEWIHDSGEFYLSTHTSTGSSIQHTQELLKEHEEFQITAKQTKERVKLLIQLADGFCEKGHAHAAEIKKCVTAVDKRYRDFSLRMEKYRTSLEKALGISSDSNKSSKSLQLDIIPASIPGSEVKLRDAAHELNEEKRKSARRKEFIMAELIQTEKAYVRDLRECMDTYLWEMTSGVEEIPPGIVNKELIIFGNMQEIYEFHNNIFLKELEKYEQLPEDVGHCFVTWADKFQMYVTYCKNKPDSTQLILEHAGSYFDEIQQRHGLANSISSYLIKPVQRITKYQLLLKELLTCCEEGKGEIKDGLEVMLSVPKRANDAMHLSMLEGFDENIESQGELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQERTVHLRGALKEPIHIPKTAPAARQKGRRDGEDLDSQGDGSSQPDTISIASRTSQNTLDSDKLSGGCELTVVIHDFTACNSNELTIRRGQTVEVLERPHDKPDWCLVRTTDRSPAAEGLVPCGSLCIAHSRSSMEMEGIFNHKDSLSVSSNDASPPASVASLQPHMIGAQSSPGPKRPGNTLRKWLTSPVRRLSSGKADGHAKKLAHKHKKSREVRKSADAGSQKDSDDSAATPQDETIEERGRNEGLSSGTLSKSSSSGMQSCGEEEGEEGADAVPLPPPMAIQQHSLLQPDSQDDKASSRLLVRPSSSETPSAAELVSAIEELVKSKMALEDRPSSLLVDQGDSSSPSFNPSDNSLLSSSSPIDEMEERKSSSLKRRHYVLQELVETERDYVRDLGCVVEGYMALMK…
SIO_010081: Trio
subclass of: SO_0000673
so part of: Trio
location: join(5892494..5892650,6003919..6003993,6008392..6008506,6017881..6018073,6020097..6020609,6022214..6022336,6025988..6026179,6035168..6035299,6043174..6043404,6051648..6051770,6060348..6060539,6075218..6075387,6076270..6076444,6080228..6080423,6081138..6081304,6083649..6083768,6085291..6085482,6085886..6086035,6087995..6088109,6092121..6092236,6096102..6096224,6102040..6102234,6102329..6102444,6103111..6103177,6103722..6103831,6104430..6104499,6105025..6105114,6107206..6107298,6109640..6109751,6111136..6111326,6113300..6113401,6117550..6117692,6118362..6118461,6130428..6130671,6164623..6164915,6165601..6165771,6168264..6168359,6170431..6170579,6172887..6172953,6174665..6174768,6180852..6180921,6182940..6183029,6184429..6184521,6185351..6185401,6185571..6185648,6186492..6186683,6189136..6189313,6190322..6191135,6194969..6195216,6196458..6196596,6197055..6197082,6197268..6197430,6197653..6197773,6203051..6203129,6205007..6205207,6206884..6207022,6207479..6208027)
location: region:5892494-6208027:1
so has part: feature:5892494-5892650:1:exon
so has part: feature:6003919-6003993:1:exon
so has part: feature:6008392-6008506:1:exon
so has part: feature:6017881-6018073:1:exon
so has part: feature:6020097-6020609:1:exon
so has part: feature:6022214-6022336:1:exon
so has part: feature:6025988-6026179:1:exon
so has part: feature:6035168-6035299:1:exon
so has part: feature:6043174-6043404:1:exon
so has part: feature:6051648-6051770:1:exon
so has part: feature:6060348-6060539:1:exon
so has part: feature:6075218-6075387:1:exon
so has part: feature:6076270-6076444:1:exon
so has part: feature:6080228-6080423:1:exon
so has part: feature:6081138-6081304:1:exon
so has part: feature:6083649-6083768:1:exon
so has part: feature:6085291-6085482:1:exon
so has part: feature:6085886-6086035:1:exon
so has part: feature:6087995-6088109:1:exon
so has part: feature:6092121-6092236:1:exon
so has part: feature:6096102-6096224:1:exon
so has part: feature:6102040-6102234:1:exon
so has part: feature:6102329-6102444:1:exon
so has part: feature:6103111-6103177:1:exon
so has part: feature:6103722-6103831:1:exon
so has part: feature:6104430-6104499:1:exon
so has part: feature:6105025-6105114:1:exon
so has part: feature:6107206-6107298:1:exon
so has part: feature:6109640-6109751:1:exon
so has part: feature:6111136-6111326:1:exon
so has part: feature:6113300-6113401:1:exon
so has part: feature:6117550-6117692:1:exon
so has part: feature:6118362-6118461:1:exon
so has part: feature:6130428-6130671:1:exon
so has part: feature:6164623-6164915:1:exon
so has part: feature:6165601-6165771:1:exon
so has part: feature:6168264-6168359:1:exon
so has part: feature:6170431-6170579:1:exon
so has part: feature:6172887-6172953:1:exon
so has part: feature:6174665-6174768:1:exon
so has part: feature:6180852-6180921:1:exon
so has part: feature:6182940-6183029:1:exon
so has part: feature:6184429-6184521:1:exon
so has part: feature:6185351-6185401:1:exon
so has part: feature:6185571-6185648:1:exon
so has part: feature:6186492-6186683:1:exon
so has part: feature:6189136-6189313:1:exon
so has part: feature:6190322-6191135:1:exon
so has part: feature:6194969-6195216:1:exon
so has part: feature:6196458-6196596:1:exon
so has part: feature:6197055-6197082:1:exon
so has part: feature:6197268-6197430:1:exon
so has part: feature:6197653-6197773:1:exon
so has part: feature:6203051-6203129:1:exon
so has part: feature:6205007-6205207:1:exon
so has part: feature:6206884-6207022:1:exon
so has part: feature:6207479-6208027:1:exon

XP_028723994.2
type: Protein
SIO_000068: ncbiprotein

position:6208027:1
position: 6208027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5892494-5892650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6003919-6003993:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6008392-6008506:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6017881-6018073:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6020097-6020609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6022214-6022336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6025988-6026179:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6035168-6035299:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6043174-6043404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6051648-6051770:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6060348-6060539:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6075218-6075387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6076270-6076444:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6080228-6080423:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6081138-6081304:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6083649-6083768:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6085291-6085482:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6085886-6086035:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6087995-6088109:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6092121-6092236:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6096102-6096224:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6102040-6102234:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6102329-6102444:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6103111-6103177:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6103722-6103831:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6104430-6104499:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6105025-6105114:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6107206-6107298:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6109640-6109751:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6111136-6111326:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6113300-6113401:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6117550-6117692:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:6118362-6118461:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:6130428-6130671:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:6164623-6164915:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:6165601-6165771:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:6168264-6168359:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:6170431-6170579:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:6172887-6172953:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:6174665-6174768:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:6180852-6180921:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:6182940-6183029:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:6184429-6184521:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:6185351-6185401:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:6185571-6185648:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:6186492-6186683:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:6189136-6189313:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:6190322-6191135:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:6194969-6195216:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:6196458-6196596:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:6197055-6197082:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:6197268-6197430:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:6197653-6197773:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:6203051-6203129:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:6205007-6205207:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:6206884-6207022:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:6207479-6208027:1:exon

LOC114692442
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114692442
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5899225..5901446
location: region:5899225-5901446:1
so has part: feature:5899225-5901446:1:exon
subclass of: SO_0000010

114692442
type: Gene
SIO_000068: ncbigene

position:5899225:1
position: 5899225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5901446:1
position: 5901446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5899225-5901446:1:exon

LOC114692442
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114692442
product: 60S ribosomal protein L30-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_028868162.1
SIO_010081: LOC114692442
subclass of: SO_0000673
so part of: LOC114692442
location: 5899225..5901446
location: region:5899225-5901446:1
so has part: feature:5899225-5901446:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5899225-5901446:1:exon

LOC114692442
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114692442
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L30-like
translation: MVATKKTKKSLELINSRLQLVMKSGKYILGYKQTLKMIRQGKAKLVILDNNCPALRKSELEYYAVLAKTAVHHYSGNNIELDTAYGKYYRVCTLAIIDPGDSDIRSMPEQTGEK
SIO_010081: LOC114692442
subclass of: SO_0000673
so part of: LOC114692442
location: 5899708..5900052
location: region:5899708-5900052:1
so has part: feature:5899708-5900052:1:exon

XP_028723995.1
type: Protein
SIO_000068: ncbiprotein

position:5899708:1
position: 5899708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5900052:1
position: 5900052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5899708-5900052:1:exon

Otulinl
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Otulinl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6264781..6288882
location: region:6264781-6288882:1
so has part: feature:6264781-6288882:1:exon
subclass of: SO_0000010

114692443
type: Gene
SIO_000068: ncbigene

position:6264781:1
position: 6264781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6288882:1
position: 6288882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6264781-6288882:1:exon

Otulinl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Otulinl
product: OTU deubiquitinase with linear linkage specificity like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_028868164.2
SIO_010081: Otulinl
subclass of: SO_0000673
so part of: Otulinl
location: join(6264781..6264930,6281115..6281274,6281365..6281396,6281509..6281600,6283030..6283179,6285695..6285823,6287134..6287403,6288302..6288882)
location: region:6264781-6288882:1
so has part: feature:6264781-6264930:1:exon
so has part: feature:6281115-6281274:1:exon
so has part: feature:6281365-6281396:1:exon
so has part: feature:6281509-6281600:1:exon
so has part: feature:6283030-6283179:1:exon
so has part: feature:6285695-6285823:1:exon
so has part: feature:6287134-6287403:1:exon
so has part: feature:6288302-6288882:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6264781-6264930:1:exon

position:6264930:1
position: 6264930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6281115-6281274:1:exon

position:6281115:1
position: 6281115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6281274:1
position: 6281274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6281365-6281396:1:exon

position:6281365:1
position: 6281365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6281396:1
position: 6281396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6281509-6281600:1:exon

position:6281509:1
position: 6281509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6281600:1
position: 6281600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6283030-6283179:1:exon

position:6283030:1
position: 6283030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6283179:1
position: 6283179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6285695-6285823:1:exon

position:6285695:1
position: 6285695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6285823:1
position: 6285823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6287134-6287403:1:exon

position:6287134:1
position: 6287134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6287403:1
position: 6287403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6288302-6288882:1:exon

position:6288302:1
position: 6288302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Otulinl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Otulinl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ubiquitin thioesterase OTULINL
translation: MEAPRSAPRERERARTTAGSDQVHSWILVASQVVSTAWRIARASVTLVVSLLSASLCYFRRLHLYLGHRLKWWIGYLQRKFKRNLSVEAEVDLLSYCAREWKGETPRAKLMRKAYEELFWRYHIKCVRPVKRDNYDALRSVLFQIFSQGLSFPPWMKEKDIVKLPEKLLFSQGCNWIQQYSFGPEKYTGSNVFGKLRKCVELLKMQWTEFSGMRDYHKRGSMCNILFSDAILEYKLYEALKFIMLYQVTEVYEQMKTNKIIPSLFRLLFSRESSSDPLSFMMNHLNSIGDTCGLEQIDMFILGYSLQVKIKVFRLFKFNSRDFAVCYPEEPLREWPEISLLTENDRQYYIPVF
SIO_010081: Otulinl
subclass of: SO_0000673
so part of: Otulinl
location: join(6264876..6264930,6281115..6281274,6281365..6281396,6281509..6281600,6283030..6283179,6285695..6285823,6287134..6287403,6288302..6288475)
location: region:6264876-6288475:1
so has part: feature:6264876-6264930:1:exon
so has part: feature:6281115-6281274:1:exon
so has part: feature:6281365-6281396:1:exon
so has part: feature:6281509-6281600:1:exon
so has part: feature:6283030-6283179:1:exon
so has part: feature:6285695-6285823:1:exon
so has part: feature:6287134-6287403:1:exon
so has part: feature:6288302-6288475:1:exon

XP_028723997.1
type: Protein
SIO_000068: ncbiprotein

position:6264876:1
position: 6264876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6288475:1
position: 6288475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6264876-6264930:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6281115-6281274:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6281365-6281396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6281509-6281600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6283030-6283179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6285695-6285823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6287134-6287403:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6288302-6288475:1:exon

LOC119088750
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119088750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6293498..6295299)
location: region:6293498-6295299:-1
so has part: feature:6293498-6295299:-1:exon
subclass of: SO_0000011

119088750
type: Gene
SIO_000068: ncbigene

position:6293498:-1
position: 6293498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6295299:-1
position: 6295299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6293498-6295299:-1:exon

LOC119088750
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119088750
product: uncharacterized LOC119088750
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005092470.1
SIO_010081: LOC119088750
subclass of: SO_0000673
so part of: LOC119088750
location: complement(join(6293498..6294011,6294331..6294463,6295129..6295299))
location: region:6293498-6295299:-1
so has part: feature:6295129-6295299:-1:exon
so has part: feature:6294331-6294463:-1:exon
so has part: feature:6293498-6294011:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6295129-6295299:-1:exon

position:6295129:-1
position: 6295129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6294331-6294463:-1:exon

position:6294331:-1
position: 6294331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6294463:-1
position: 6294463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6293498-6294011:-1:exon

position:6294011:-1
position: 6294011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Otulin
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Otulin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6321324..6348255
location: region:6321324-6348255:1
so has part: feature:6321324-6348255:1:exon
subclass of: SO_0000010

114692444
type: Gene
SIO_000068: ncbigene

position:6321324:1
position: 6321324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6348255:1
position: 6348255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6321324-6348255:1:exon

Otulin
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Otulin
product: OTU deubiquitinase with linear linkage specificity, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_028868166.2
SIO_010081: Otulin
subclass of: SO_0000673
so part of: Otulin
location: join(6321324..6321578,6329723..6329799,6333273..6333367,6336937..6337080,6341337..6341462,6343816..6344085,6346456..6348255)
location: region:6321324-6348255:1
so has part: feature:6321324-6321578:1:exon
so has part: feature:6329723-6329799:1:exon
so has part: feature:6333273-6333367:1:exon
so has part: feature:6336937-6337080:1:exon
so has part: feature:6341337-6341462:1:exon
so has part: feature:6343816-6344085:1:exon
so has part: feature:6346456-6348255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6321324-6321578:1:exon

position:6321578:1
position: 6321578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6329723-6329799:1:exon

position:6329723:1
position: 6329723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6329799:1
position: 6329799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6333273-6333367:1:exon

position:6333273:1
position: 6333273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6333367:1
position: 6333367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6336937-6337080:1:exon

position:6336937:1
position: 6336937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6337080:1
position: 6337080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6341337-6341462:1:exon

position:6341337:1
position: 6341337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6341462:1
position: 6341462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6343816-6344085:1:exon

position:6343816:1
position: 6343816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6344085:1
position: 6344085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6346456-6348255:1:exon

position:6346456:1
position: 6346456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Otulin
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Otulin
product: OTU deubiquitinase with linear linkage specificity, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_028868165.2
SIO_010081: Otulin
subclass of: SO_0000673
so part of: Otulin
location: join(6321402..6321578,6329723..6329799,6333270..6333367,6336937..6337080,6341337..6341462,6343816..6344085,6346456..6348255)
location: region:6321402-6348255:1
so has part: feature:6321402-6321578:1:exon
so has part: feature:6329723-6329799:1:exon
so has part: feature:6333270-6333367:1:exon
so has part: feature:6336937-6337080:1:exon
so has part: feature:6341337-6341462:1:exon
so has part: feature:6343816-6344085:1:exon
so has part: feature:6346456-6348255:1:exon

position:6321402:1
position: 6321402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6321402-6321578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6329723-6329799:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6333270-6333367:1:exon

position:6333270:1
position: 6333270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6336937-6337080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6341337-6341462:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6343816-6344085:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6346456-6348255:1:exon

Otulin
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Otulin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin thioesterase otulin isoform X1
translation: MSRGTMPQPGAWPGASCAETPAREAGAAAREGGKVTTGAQPRAAMRCPAEHEEDMYRAADEIEKEKELLIHERGISAEPRLSVAPEMDIMDYCKKEWRGNTQKATCMKKGYEEVSQKFTSIRRVRGDNYCALRATLFQAMSQLAELPLWLQDPELTLLPEKLINRHSWIKQWKLGLKLDGKNEDLVERIKESLALLRKKWASLAEMKTAEARQLACDELFTNEEEEYSLYEAVKFLMLNRAIELYDDKEKGKEVPFFSVLLFARDTSNDPGQLLRNHLNQVGHTGGLEQVEMFLLAYAVRHTIQVYRLSKYNTEEFITVYPTDPPKDWPMVTLIAEDDRHYNIPVRVCEETSL
SIO_010081: Otulin
subclass of: SO_0000673
so part of: Otulin
location: join(6321427..6321578,6329723..6329799,6333270..6333367,6336937..6337080,6341337..6341462,6343816..6344085,6346456..6346650)
location: region:6321427-6346650:1
so has part: feature:6321427-6321578:1:exon
so has part: feature:6329723-6329799:1:exon
so has part: feature:6333270-6333367:1:exon
so has part: feature:6336937-6337080:1:exon
so has part: feature:6341337-6341462:1:exon
so has part: feature:6343816-6344085:1:exon
so has part: feature:6346456-6346650:1:exon

XP_028723998.1
type: Protein
SIO_000068: ncbiprotein

position:6321427:1
position: 6321427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6346650:1
position: 6346650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6321427-6321578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6329723-6329799:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6333270-6333367:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6336937-6337080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6341337-6341462:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6343816-6344085:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6346456-6346650:1:exon

Otulin
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Otulin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin thioesterase otulin isoform X2
translation: MSRGTMPQPGAWPGASCAETPAREAGAAAREGGKVTTGAQPRAAMRCPAEHEEDMYRAADEIEKEKELLIHERGISEPRLSVAPEMDIMDYCKKEWRGNTQKATCMKKGYEEVSQKFTSIRRVRGDNYCALRATLFQAMSQLAELPLWLQDPELTLLPEKLINRHSWIKQWKLGLKLDGKNEDLVERIKESLALLRKKWASLAEMKTAEARQLACDELFTNEEEEYSLYEAVKFLMLNRAIELYDDKEKGKEVPFFSVLLFARDTSNDPGQLLRNHLNQVGHTGGLEQVEMFLLAYAVRHTIQVYRLSKYNTEEFITVYPTDPPKDWPMVTLIAEDDRHYNIPVRVCEETSL
SIO_010081: Otulin
subclass of: SO_0000673
so part of: Otulin
location: join(6321427..6321578,6329723..6329799,6333273..6333367,6336937..6337080,6341337..6341462,6343816..6344085,6346456..6346650)
location: region:6321427-6346650:1
so has part: feature:6321427-6321578:1:exon
so has part: feature:6329723-6329799:1:exon
so has part: feature:6333273-6333367:1:exon
so has part: feature:6336937-6337080:1:exon
so has part: feature:6341337-6341462:1:exon
so has part: feature:6343816-6344085:1:exon
so has part: feature:6346456-6346650:1:exon

XP_028723999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6321427-6321578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6329723-6329799:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6333273-6333367:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6336937-6337080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6341337-6341462:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6343816-6344085:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6346456-6346650:1:exon

Ankh
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Ankh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6360848..6498173)
location: region:6360848-6498173:-1
so has part: feature:6360848-6498173:-1:exon
subclass of: SO_0000010

114692445
type: Gene
SIO_000068: ncbigene

position:6360848:-1
position: 6360848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6498173:-1
position: 6498173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6360848-6498173:-1:exon

Ankh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Ankh
product: ANKH inorganic pyrophosphate transport regulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_028868168.2
SIO_010081: Ankh
subclass of: SO_0000673
so part of: Ankh
location: complement(join(6360848..6362793,6364564..6364663,6365204..6365327,6368092..6368221,6386375..6386470,6390030..6390122,6392487..6392621,6394658..6394828,6402161..6402244,6405570..6405688,6415007..6415223,6497727..6498173))
location: region:6360848-6498173:-1
so has part: feature:6497727-6498173:-1:exon
so has part: feature:6415007-6415223:-1:exon
so has part: feature:6405570-6405688:-1:exon
so has part: feature:6402161-6402244:-1:exon
so has part: feature:6394658-6394828:-1:exon
so has part: feature:6392487-6392621:-1:exon
so has part: feature:6390030-6390122:-1:exon
so has part: feature:6386375-6386470:-1:exon
so has part: feature:6368092-6368221:-1:exon
so has part: feature:6365204-6365327:-1:exon
so has part: feature:6364564-6364663:-1:exon
so has part: feature:6360848-6362793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6497727-6498173:-1:exon

position:6497727:-1
position: 6497727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6415007-6415223:-1:exon

position:6415007:-1
position: 6415007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6415223:-1
position: 6415223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6405570-6405688:-1:exon

position:6405570:-1
position: 6405570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6405688:-1
position: 6405688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6402161-6402244:-1:exon

position:6402161:-1
position: 6402161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6402244:-1
position: 6402244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6394658-6394828:-1:exon

position:6394658:-1
position: 6394658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6394828:-1
position: 6394828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6392487-6392621:-1:exon

position:6392487:-1
position: 6392487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6392621:-1
position: 6392621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6390030-6390122:-1:exon

position:6390030:-1
position: 6390030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6390122:-1
position: 6390122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6386375-6386470:-1:exon

position:6386375:-1
position: 6386375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6386470:-1
position: 6386470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6368092-6368221:-1:exon

position:6368092:-1
position: 6368092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6368221:-1
position: 6368221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6365204-6365327:-1:exon

position:6365204:-1
position: 6365204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6365327:-1
position: 6365327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6364564-6364663:-1:exon

position:6364564:-1
position: 6364564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6364663:-1
position: 6364663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6360848-6362793:-1:exon

position:6362793:-1
position: 6362793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ankh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Ankh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: progressive ankylosis protein homolog
translation: MVKFPALTHYWPLIRFLVPLGITNIAIDFGEQALNRGIAAVKEDAVEMLASYGLAYSLMKFFTGPMSDFKNVGLVFVNSKRDRTKAVLCMVVAGAIAAVFHTLIAYSDLGYYIINKLHHVDESVGSKTRRAFLYLAAFPFMDAMAWTHAGILLKHKYSFLVGCASISDVIAQVVFVAILLHSHLECREPLLIPILSLYMGALVRCTTLCLGYYKNIHDIIPDRSGPELGGDATIRKMLSFWWPLALILATQRISRPIVNLFVSRDLGGSSAATEAVAILTATYPVGHMPYGWLTEIRAVYPAFDKNNPSNKLANTSNTVTSAHIKKFTFVCMALSLTLCFVMFWTPNVSEKILIDIIGVDFAFAELCVIPLRIFSFFPVPVTVRAHLTGWLMTLKKTFVLAPSSVLRIIVLITSLVVLPYLGVHGATLGVGSLLAGFVGESTMVAIAACYVYRKQKKKMENESATEGEDSAMTDMPPAEEVTDIVEMREENE
SIO_010081: Ankh
subclass of: SO_0000673
so part of: Ankh
location: complement(join(6362680..6362793,6364564..6364663,6365204..6365327,6368092..6368221,6386375..6386470,6390030..6390122,6392487..6392621,6394658..6394828,6402161..6402244,6405570..6405688,6415007..6415223,6497727..6497822))
location: region:6362680-6497822:-1
so has part: feature:6497727-6497822:-1:exon
so has part: feature:6415007-6415223:-1:exon
so has part: feature:6405570-6405688:-1:exon
so has part: feature:6402161-6402244:-1:exon
so has part: feature:6394658-6394828:-1:exon
so has part: feature:6392487-6392621:-1:exon
so has part: feature:6390030-6390122:-1:exon
so has part: feature:6386375-6386470:-1:exon
so has part: feature:6368092-6368221:-1:exon
so has part: feature:6365204-6365327:-1:exon
so has part: feature:6364564-6364663:-1:exon
so has part: feature:6362680-6362793:-1:exon

XP_028724001.1
type: Protein
SIO_000068: ncbiprotein

position:6362680:-1
position: 6362680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6497822:-1
position: 6497822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6497727-6497822:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6415007-6415223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6405570-6405688:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6402161-6402244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6394658-6394828:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6392487-6392621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6390030-6390122:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6386375-6386470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6368092-6368221:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6365204-6365327:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6364564-6364663:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6362680-6362793:-1:exon

LOC114692434
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114692434
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6690485..6690771)
location: region:6690485-6690771:-1
so has part: feature:6690485-6690771:-1:exon
subclass of: SO_0000010

114692434
type: Gene
SIO_000068: ncbigene

position:6690485:-1
position: 6690485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6690771:-1
position: 6690771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6690485-6690771:-1:exon

LOC114692434
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114692434
product: 60S ribosomal protein L31-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037209553.1
SIO_010081: LOC114692434
subclass of: SO_0000673
so part of: LOC114692434
location: complement(6690485..6690771)
location: region:6690485-6690771:-1
so has part: feature:6690485-6690771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6690485-6690771:-1:exon

LOC114692434
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114692434
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L31-like
translation: MAPTKKGGEKKGRSAINEVVTREYTIHIHKRIHDVGFKKRASRALKEIQKFAMKEMGTPDVRIDTRLNKASGPKE
SIO_010081: LOC114692434
subclass of: SO_0000673
so part of: LOC114692434
location: complement(6690544..6690771)
location: region:6690544-6690771:-1
so has part: feature:6690544-6690771:-1:exon

XP_037065448.1
type: Protein
SIO_000068: ncbiprotein

position:6690544:-1
position: 6690544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6690544-6690771:-1:exon

Fbxl7
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Fbxl7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7042779..7416077
location: region:7042779-7416077:1
so has part: feature:7042779-7416077:1:exon
subclass of: SO_0000010

114692446
type: Gene
SIO_000068: ncbigene

position:7042779:1
position: 7042779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7416077:1
position: 7416077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7042779-7416077:1:exon

Fbxl7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Fbxl7
product: F-box and leucine rich repeat protein 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_028868169.2
SIO_010081: Fbxl7
subclass of: SO_0000673
so part of: Fbxl7
location: join(7042779..7043329,7156958..7157047,7405214..7405825,7412632..7416077)
location: region:7042779-7416077:1
so has part: feature:7042779-7043329:1:exon
so has part: feature:7156958-7157047:1:exon
so has part: feature:7405214-7405825:1:exon
so has part: feature:7412632-7416077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7042779-7043329:1:exon

position:7043329:1
position: 7043329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7156958-7157047:1:exon

position:7156958:1
position: 7156958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7157047:1
position: 7157047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7405214-7405825:1:exon

position:7405214:1
position: 7405214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7405825:1
position: 7405825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7412632-7416077:1:exon

position:7412632:1
position: 7412632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fbxl7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Fbxl7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/LRR-repeat protein 7
translation: MGANNGKQYGSEGKGSSSISSDVSSSTDHTPTKAQKNVATSEDSDLSMRTLSTPSPALICPPALPGFQNGRGSSTSSSSITGETVAMVHSPPPTRLTHPLIRLASRPQKEQASIDRLPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLWRTIRLTGETINVDRALKVLTRRLCQDTPNVCLMLETVIVSGCRRLTDRGLYTIAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVSGCSKVTCISLTREASIKLSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYCTSIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRITDVGIRYVAKYCSKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLESLALNCFNLKRLSLKSCESITGQGLQIVAANCFDLQMLNVQDCEASVEALRFVKRHCKRCVIEHTNPAFF
SIO_010081: Fbxl7
subclass of: SO_0000673
so part of: Fbxl7
location: join(7043293..7043329,7156958..7157047,7405214..7405825,7412632..7413368)
location: region:7043293-7413368:1
so has part: feature:7043293-7043329:1:exon
so has part: feature:7156958-7157047:1:exon
so has part: feature:7405214-7405825:1:exon
so has part: feature:7412632-7413368:1:exon

XP_028724002.1
type: Protein
SIO_000068: ncbiprotein

position:7043293:1
position: 7043293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7413368:1
position: 7413368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7043293-7043329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7156958-7157047:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7405214-7405825:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7412632-7413368:1:exon

LOC114692447
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114692447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7161250..7162541)
location: region:7161250-7162541:-1
so has part: feature:7161250-7162541:-1:exon

114692447
type: Gene
SIO_000068: ncbigene

position:7161250:-1
position: 7161250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7162541:-1
position: 7162541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7161250-7162541:-1:exon

LOC114692447
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114692447
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114692447
subclass of: SO_0000673
so part of: LOC114692447
location: complement(7161250..7162541)
location: region:7161250-7162541:-1
so has part: feature:7161250-7162541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7161250-7162541:-1:exon

Marchf11
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Marchf11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7532025..7638339)
location: region:7532025-7638339:-1
so has part: feature:7532025-7638339:-1:exon
subclass of: SO_0000010

114692449
type: Gene
SIO_000068: ncbigene

position:7532025:-1
position: 7532025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7638339:-1
position: 7638339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7532025-7638339:-1:exon

Marchf11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Marchf11
product: membrane associated ring-CH-type finger 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_028868172.2
SIO_010081: Marchf11
subclass of: SO_0000673
so part of: Marchf11
location: complement(join(7532025..7532510,7636319..7636474,7637599..7638339))
location: region:7532025-7638339:-1
so has part: feature:7637599-7638339:-1:exon
so has part: feature:7636319-7636474:-1:exon
so has part: feature:7532025-7532510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7637599-7638339:-1:exon

position:7637599:-1
position: 7637599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7636319-7636474:-1:exon

position:7636319:-1
position: 7636319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7636474:-1
position: 7636474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7532025-7532510:-1:exon

position:7532510:-1
position: 7532510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Marchf11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Marchf11
product: membrane associated ring-CH-type finger 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_028868171.2
SIO_010081: Marchf11
subclass of: SO_0000673
so part of: Marchf11
location: complement(join(7532025..7532510,7553230..7553422,7636319..7636474,7637599..7638339))
location: region:7532025-7638339:-1
so has part: feature:7637599-7638339:-1:exon
so has part: feature:7636319-7636474:-1:exon
so has part: feature:7553230-7553422:-1:exon
so has part: feature:7532025-7532510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7637599-7638339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7636319-7636474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7553230-7553422:-1:exon

position:7553230:-1
position: 7553230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7553422:-1
position: 7553422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7532025-7532510:-1:exon

Marchf11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Marchf11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MARCHF11 isoform X1
translation: MSNEGSNRCSRVDSREAEPPLPPPPPPPPPGEPALVPTSPRYRPPLPAPPERTAGSGEPPVEVAPRRKGADEPLPPSLLPRDQEVSAAGDSCEGPRRLPEVAVPEAAAEKGGPGEPEAGACGEGERRSTGDQPETRSVCSSRSSSSGDQRSGHQHQHHQPICKICFQGAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELCCYRYHVTAIKMKQPCQWQSISITLVEKVQMIAVILGSLFLIASVTWLLWSAFSPYAVWQRKDILFQICYGMYGFMDLVCIGLIVHEGAAVYRVFKRWRAVNLHWDVLNYDKATDIEESSRGESSTSRTLWLPLSALRNRNLVHPTQLTSPRFQCGYVLLHLFNRMRAHEDVSEDNGSGEVVMRVTSV
SIO_010081: Marchf11
subclass of: SO_0000673
so part of: Marchf11
location: complement(join(7532188..7532510,7553230..7553422,7636319..7636474,7637599..7638111))
location: region:7532188-7638111:-1
so has part: feature:7637599-7638111:-1:exon
so has part: feature:7636319-7636474:-1:exon
so has part: feature:7553230-7553422:-1:exon
so has part: feature:7532188-7532510:-1:exon

XP_028724004.1
type: Protein
SIO_000068: ncbiprotein

position:7532188:-1
position: 7532188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7638111:-1
position: 7638111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7637599-7638111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7636319-7636474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7553230-7553422:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7532188-7532510:-1:exon

Marchf11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Marchf11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MARCHF11 isoform X2
translation: MSNEGSNRCSRVDSREAEPPLPPPPPPPPPGEPALVPTSPRYRPPLPAPPERTAGSGEPPVEVAPRRKGADEPLPPSLLPRDQEVSAAGDSCEGPRRLPEVAVPEAAAEKGGPGEPEAGACGEGERRSTGDQPETRSVCSSRSSSSGDQRSGHQHQHHQPICKICFQGAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELCCYRYHVTAIKMKQPCQASLSMKELQFTEYLSDGELLICTGMY
SIO_010081: Marchf11
subclass of: SO_0000673
so part of: Marchf11
location: complement(join(7532430..7532510,7636319..7636474,7637599..7638111))
location: region:7532430-7638111:-1
so has part: feature:7637599-7638111:-1:exon
so has part: feature:7636319-7636474:-1:exon
so has part: feature:7532430-7532510:-1:exon

XP_028724005.1
type: Protein
SIO_000068: ncbiprotein

position:7532430:-1
position: 7532430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7637599-7638111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7636319-7636474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7532430-7532510:-1:exon

LOC114692436
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114692436
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7746307..7763876)
location: region:7746307-7763876:-1
so has part: feature:7746307-7763876:-1:exon
subclass of: SO_0000010

114692436
type: Gene
SIO_000068: ncbigene

position:7746307:-1
position: 7746307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7763876:-1
position: 7763876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7746307-7763876:-1:exon

LOC114692436
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114692436
product: adenylate kinase 7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_028868159.2
SIO_010081: LOC114692436
subclass of: SO_0000673
so part of: LOC114692436
location: complement(join(7746307..7747093,7753392..7753442,7762517..7762575,7763782..7763876))
location: region:7746307-7763876:-1
so has part: feature:7763782-7763876:-1:exon
so has part: feature:7762517-7762575:-1:exon
so has part: feature:7753392-7753442:-1:exon
so has part: feature:7746307-7747093:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7763782-7763876:-1:exon

position:7763782:-1
position: 7763782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7762517-7762575:-1:exon

position:7762517:-1
position: 7762517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7762575:-1
position: 7762575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7753392-7753442:-1:exon

position:7753392:-1
position: 7753392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7753442:-1
position: 7753442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7746307-7747093:-1:exon

position:7747093:-1
position: 7747093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114692436
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114692436
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate kinase 7-like
translation: MPFPILFSFVVAYVIGGCSPSPVPVLHVLFKSPPLQKLLKDISLNVTDVFQVSFTSSSTVFYELREVDGSEEDEEEEEEIRGKMFPFDRLTTPEFVCGLDASDDFLKERVMNLPESVVAGTHYSQDRFLRSLSNYRDINTDDETVFNYFDEIEIHPIHIDVGKLEDAQNRLAIKQLIKEIGEPRNYGLTDEEKAEVEKKAAEERLAKEAAETAEREHKEAVEMAERIAHWEEWSKRLEEVKREERELLEAQSIPLRNYLMTYVMPTLMQGLNECCKVRPEDPVDFLAEYLFRNNPEMQ
SIO_010081: LOC114692436
subclass of: SO_0000673
so part of: LOC114692436
location: complement(join(7746402..7747093,7753392..7753442,7762517..7762575,7763782..7763876))
location: region:7746402-7763876:-1
so has part: feature:7763782-7763876:-1:exon
so has part: feature:7762517-7762575:-1:exon
so has part: feature:7753392-7753442:-1:exon
so has part: feature:7746402-7747093:-1:exon

XP_028723992.1
type: Protein
SIO_000068: ncbiprotein

position:7746402:-1
position: 7746402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7763782-7763876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7762517-7762575:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7753392-7753442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7746402-7747093:-1:exon

Znf622
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Znf622
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7917311..7931775)
location: region:7917311-7931775:-1
so has part: feature:7917311-7931775:-1:exon
subclass of: SO_0000010

114692450
type: Gene
SIO_000068: ncbigene

position:7917311:-1
position: 7917311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7931775:-1
position: 7931775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7917311-7931775:-1:exon

Znf622
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Znf622
product: zinc finger protein 622
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_028868173.2
SIO_010081: Znf622
subclass of: SO_0000673
so part of: Znf622
location: complement(join(7917311..7917570,7918469..7918612,7925700..7925812,7928535..7928697,7928812..7929060,7930982..7931775))
location: region:7917311-7931775:-1
so has part: feature:7930982-7931775:-1:exon
so has part: feature:7928812-7929060:-1:exon
so has part: feature:7928535-7928697:-1:exon
so has part: feature:7925700-7925812:-1:exon
so has part: feature:7918469-7918612:-1:exon
so has part: feature:7917311-7917570:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7930982-7931775:-1:exon

position:7930982:-1
position: 7930982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7928812-7929060:-1:exon

position:7928812:-1
position: 7928812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7929060:-1
position: 7929060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7928535-7928697:-1:exon

position:7928535:-1
position: 7928535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7928697:-1
position: 7928697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7925700-7925812:-1:exon

position:7925700:-1
position: 7925700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7925812:-1
position: 7925812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7918469-7918612:-1:exon

position:7918469:-1
position: 7918469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7918612:-1
position: 7918612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7917311-7917570:-1:exon

position:7917570:-1
position: 7917570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Znf622
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Znf622
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 622
translation: MATYTCITCRVAFLDAELQRAHYKTDWHRYNLRRKVASMAPVTAEGFQERVRAQRAVAEEESKGTATYCTVCSKKFATFNAYENHLKSRRHVELEKKAVRAVSRQVEMLNEKNLEKGLGVDGVDKDAMNAAIQQAIKAQPSTSPKKVPSVPTEESRRAPGAGAGAGASRRGPQERDPTEKPPRLQWFEQRAKKLAKQQWEESEEEDEEDEEEEDWEDIDSDDGLECENPGVEDQDAEDAEAGESPPQGAIPITDCLFCSHHSSSLVKNVAHMTKIHSFFIPDIEYLSDLKGLIKYLGEKIGVGKVCLWCNEKGKSFYSTEAVQAHMNDKSHCKLFTDGDAALEFADFYDFRSSYPDYKEGQDPSEIEALFSEKILECDDETMELILPSGARVGHRSLMRYYKQRFGLPRAVTVARNQKAVGRVLQQYRALGWTGSTGAALMRERDMQYVQRMKSKWMLKTGMKNNATKQMHFRAQVRF
SIO_010081: Znf622
subclass of: SO_0000673
so part of: Znf622
location: complement(join(7917443..7917570,7918469..7918612,7925700..7925812,7928535..7928697,7928812..7929060,7930982..7931621))
location: region:7917443-7931621:-1
so has part: feature:7930982-7931621:-1:exon
so has part: feature:7928812-7929060:-1:exon
so has part: feature:7928535-7928697:-1:exon
so has part: feature:7925700-7925812:-1:exon
so has part: feature:7918469-7918612:-1:exon
so has part: feature:7917443-7917570:-1:exon

XP_028724006.1
type: Protein
SIO_000068: ncbiprotein

position:7917443:-1
position: 7917443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7931621:-1
position: 7931621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7930982-7931621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7928812-7929060:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7928535-7928697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7925700-7925812:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7918469-7918612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7917443-7917570:-1:exon

Retreg1
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Retreg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7938889..8073428)
location: region:7938889-8073428:-1
so has part: feature:7938889-8073428:-1:exon
subclass of: SO_0000010

114692451
type: Gene
SIO_000068: ncbigene

position:7938889:-1
position: 7938889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8073428:-1
position: 8073428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7938889-8073428:-1:exon

Retreg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Retreg1
product: reticulophagy regulator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_028868174.1
SIO_010081: Retreg1
subclass of: SO_0000673
so part of: Retreg1
location: complement(join(7938889..7941056,7942146..7942272,7942514..7942578,7943948..7944085,7945553..7945637,7947730..7947856,8017252..8017282,8022812..8022918,8073142..8073428))
location: region:7938889-8073428:-1
so has part: feature:8073142-8073428:-1:exon
so has part: feature:8022812-8022918:-1:exon
so has part: feature:8017252-8017282:-1:exon
so has part: feature:7947730-7947856:-1:exon
so has part: feature:7945553-7945637:-1:exon
so has part: feature:7943948-7944085:-1:exon
so has part: feature:7942514-7942578:-1:exon
so has part: feature:7942146-7942272:-1:exon
so has part: feature:7938889-7941056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8073142-8073428:-1:exon

position:8073142:-1
position: 8073142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8022812-8022918:-1:exon

position:8022812:-1
position: 8022812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8022918:-1
position: 8022918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8017252-8017282:-1:exon

position:8017252:-1
position: 8017252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8017282:-1
position: 8017282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7947730-7947856:-1:exon

position:7947730:-1
position: 7947730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7947856:-1
position: 7947856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7945553-7945637:-1:exon

position:7945553:-1
position: 7945553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7945637:-1
position: 7945637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7943948-7944085:-1:exon

position:7943948:-1
position: 7943948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7944085:-1
position: 7944085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7942514-7942578:-1:exon

position:7942514:-1
position: 7942514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7942578:-1
position: 7942578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7942146-7942272:-1:exon

position:7942146:-1
position: 7942146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7942272:-1
position: 7942272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7938889-7941056:-1:exon

position:7941056:-1
position: 7941056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Retreg1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Retreg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulophagy regulator 1 isoform X1
translation: MASLAPGEPAAQGCPAPAAEEQAPRPGVPGEEAAPEAGRAGAGPQVEEAAGKVAAALTWLLGEPVLWLGCRADELLSWKRPLRSLLAFLGANLLFWFLALTPWRVYHLISVMILGRVIMQIIKDMVLSRTRGAQLWRSLSESWEVINSKPDERPRLSHCIAESWMNFSIFLQEMSLFKQQSPGKFCLLVCSVCTFFTILGSYIPGVILSYLLLLFAFLCPLFKCNDIGQKIYSKIKSILLKLDFGIGEYINQKKRERAEADKEKSHKDDSELDFSALCPKISLTVAAKELSVSDTDVSEVSWTDNGTFNLSEGYTPQTDTSDDLDRPSEEVFSRDLSGFPSLENGTGTNDEDELSFGLPAELKRKKQQLDGGHRPSKDGQSPAGLSLPLSSDQALHLMSNLAGDVITAAMTAAIKDQLEGAQQAFAQAAPTIGEDTDTEEGDDFELLDQAELDQIESELGLTQDQDEEAQHSRKSAGFLSNLLGGH
SIO_010081: Retreg1
subclass of: SO_0000673
so part of: Retreg1
location: complement(join(7940563..7941056,7942146..7942272,7942514..7942578,7943948..7944085,7945553..7945637,7947730..7947856,8017252..8017282,8022812..8022918,8073142..8073428))
location: region:7940563-8073428:-1
so has part: feature:8073142-8073428:-1:exon
so has part: feature:8022812-8022918:-1:exon
so has part: feature:8017252-8017282:-1:exon
so has part: feature:7947730-7947856:-1:exon
so has part: feature:7945553-7945637:-1:exon
so has part: feature:7943948-7944085:-1:exon
so has part: feature:7942514-7942578:-1:exon
so has part: feature:7942146-7942272:-1:exon
so has part: feature:7940563-7941056:-1:exon

XP_028724007.1
type: Protein
SIO_000068: ncbiprotein

position:7940563:-1
position: 7940563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8073142-8073428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8022812-8022918:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8017252-8017282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7947730-7947856:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7945553-7945637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7943948-7944085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7942514-7942578:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7942146-7942272:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7940563-7941056:-1:exon

Retreg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Retreg1
product: reticulophagy regulator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_028868175.2
SIO_010081: Retreg1
subclass of: SO_0000673
so part of: Retreg1
location: complement(join(7940563..7941056,7942146..7942272,7942514..7942578,7943948..7944085,7945553..7945637,7947730..7947856,7970924..7971324))
location: region:7940563-7971324:-1
so has part: feature:7970924-7971324:-1:exon
so has part: feature:7947730-7947856:-1:exon
so has part: feature:7945553-7945637:-1:exon
so has part: feature:7943948-7944085:-1:exon
so has part: feature:7942514-7942578:-1:exon
so has part: feature:7942146-7942272:-1:exon
so has part: feature:7940563-7941056:-1:exon

position:7971324:-1
position: 7971324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7970924-7971324:-1:exon

position:7970924:-1
position: 7970924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7947730-7947856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7945553-7945637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7943948-7944085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7942514-7942578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7942146-7942272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7940563-7941056:-1:exon

Retreg1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Retreg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulophagy regulator 1 isoform X2
translation: MSEGNDCGPGRSWEVINSKPDERPRLSHCIAESWMNFSIFLQEMSLFKQQSPGKFCLLVCSVCTFFTILGSYIPGVILSYLLLLFAFLCPLFKCNDIGQKIYSKIKSILLKLDFGIGEYINQKKRERAEADKEKSHKDDSELDFSALCPKISLTVAAKELSVSDTDVSEVSWTDNGTFNLSEGYTPQTDTSDDLDRPSEEVFSRDLSGFPSLENGTGTNDEDELSFGLPAELKRKKQQLDGGHRPSKDGQSPAGLSLPLSSDQALHLMSNLAGDVITAAMTAAIKDQLEGAQQAFAQAAPTIGEDTDTEEGDDFELLDQAELDQIESELGLTQDQDEEAQHSRKSAGFLSNLLGGH
SIO_010081: Retreg1
subclass of: SO_0000673
so part of: Retreg1
location: complement(join(7940563..7941056,7942146..7942272,7942514..7942578,7943948..7944085,7945553..7945637,7947730..7947856,7970924..7970958))
location: region:7940563-7970958:-1
so has part: feature:7970924-7970958:-1:exon
so has part: feature:7947730-7947856:-1:exon
so has part: feature:7945553-7945637:-1:exon
so has part: feature:7943948-7944085:-1:exon
so has part: feature:7942514-7942578:-1:exon
so has part: feature:7942146-7942272:-1:exon
so has part: feature:7940563-7941056:-1:exon

XP_028724008.1
type: Protein
SIO_000068: ncbiprotein

position:7970958:-1
position: 7970958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7970924-7970958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7947730-7947856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7945553-7945637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7943948-7944085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7942514-7942578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7942146-7942272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7940563-7941056:-1:exon

LOC114692462
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114692462
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7972328..7972431)
location: region:7972328-7972431:-1
so has part: feature:7972328-7972431:-1:exon
subclass of: SO_0000623

114692462
type: Gene
SIO_000068: ncbigene

position:7972328:-1
position: 7972328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7972431:-1
position: 7972431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7972328-7972431:-1:exon

LOC114692462
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: snRNA
gene: LOC114692462
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003734418.1
SIO_010081: LOC114692462
subclass of: SO_0000673
so part of: LOC114692462
location: complement(7972328..7972431)
location: region:7972328-7972431:-1
so has part: feature:7972328-7972431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7972328-7972431:-1:exon

Myo10
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Myo10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8103213..8316679)
location: region:8103213-8316679:-1
so has part: feature:8103213-8316679:-1:exon
subclass of: SO_0000010

114692452
type: Gene
SIO_000068: ncbigene

position:8103213:-1
position: 8103213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8316679:-1
position: 8316679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8103213-8316679:-1:exon

Myo10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Myo10
product: myosin X
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_028868176.2
SIO_010081: Myo10
subclass of: SO_0000673
so part of: Myo10
location: complement(join(8103213..8104666,8106579..8106770,8109731..8110183,8110618..8110738,8111577..8111713,8112470..8112677,8113658..8113955,8114746..8114869,8116832..8116989,8118073..8118267,8119066..8119208,8121648..8121703,8122621..8122714,8125183..8125278,8132641..8132884,8135678..8135801,8136675..8137571,8138205..8138253,8139171..8139398,8140767..8140873,8142452..8142566,8142698..8142822,8172974..8173054,8175002..8175110,8176798..8176880,8178191..8178259,8178672..8178764,8179288..8179354,8179463..8179563,8179744..8179890,8182245..8182363,8186031..8186160,8193144..8193247,8194346..8194430,8194554..8194567,8195486..8195610,8197130..8197264,8205501..8205688,8222059..8222217,8260407..8260505,8316226..8316679))
location: region:8103213-8316679:-1
so has part: feature:8316226-8316679:-1:exon
so has part: feature:8260407-8260505:-1:exon
so has part: feature:8222059-8222217:-1:exon
so has part: feature:8205501-8205688:-1:exon
so has part: feature:8197130-8197264:-1:exon
so has part: feature:8195486-8195610:-1:exon
so has part: feature:8194554-8194567:-1:exon
so has part: feature:8194346-8194430:-1:exon
so has part: feature:8193144-8193247:-1:exon
so has part: feature:8186031-8186160:-1:exon
so has part: feature:8182245-8182363:-1:exon
so has part: feature:8179744-8179890:-1:exon
so has part: feature:8179463-8179563:-1:exon
so has part: feature:8179288-8179354:-1:exon
so has part: feature:8178672-8178764:-1:exon
so has part: feature:8178191-8178259:-1:exon
so has part: feature:8176798-8176880:-1:exon
so has part: feature:8175002-8175110:-1:exon
so has part: feature:8172974-8173054:-1:exon
so has part: feature:8142698-8142822:-1:exon
so has part: feature:8142452-8142566:-1:exon
so has part: feature:8140767-8140873:-1:exon
so has part: feature:8139171-8139398:-1:exon
so has part: feature:8138205-8138253:-1:exon
so has part: feature:8136675-8137571:-1:exon
so has part: feature:8135678-8135801:-1:exon
so has part: feature:8132641-8132884:-1:exon
so has part: feature:8125183-8125278:-1:exon
so has part: feature:8122621-8122714:-1:exon
so has part: feature:8121648-8121703:-1:exon
so has part: feature:8119066-8119208:-1:exon
so has part: feature:8118073-8118267:-1:exon
so has part: feature:8116832-8116989:-1:exon
so has part: feature:8114746-8114869:-1:exon
so has part: feature:8113658-8113955:-1:exon
so has part: feature:8112470-8112677:-1:exon
so has part: feature:8111577-8111713:-1:exon
so has part: feature:8110618-8110738:-1:exon
so has part: feature:8109731-8110183:-1:exon
so has part: feature:8106579-8106770:-1:exon
so has part: feature:8103213-8104666:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8316226-8316679:-1:exon

position:8316226:-1
position: 8316226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8260407-8260505:-1:exon

position:8260407:-1
position: 8260407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8260505:-1
position: 8260505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8222059-8222217:-1:exon

position:8222059:-1
position: 8222059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8222217:-1
position: 8222217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8205501-8205688:-1:exon

position:8205501:-1
position: 8205501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8205688:-1
position: 8205688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8197130-8197264:-1:exon

position:8197130:-1
position: 8197130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8197264:-1
position: 8197264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8195486-8195610:-1:exon

position:8195486:-1
position: 8195486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8195610:-1
position: 8195610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8194554-8194567:-1:exon

position:8194554:-1
position: 8194554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8194567:-1
position: 8194567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8194346-8194430:-1:exon

position:8194346:-1
position: 8194346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8194430:-1
position: 8194430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8193144-8193247:-1:exon

position:8193144:-1
position: 8193144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8193247:-1
position: 8193247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8186031-8186160:-1:exon

position:8186031:-1
position: 8186031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8186160:-1
position: 8186160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8182245-8182363:-1:exon

position:8182245:-1
position: 8182245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8182363:-1
position: 8182363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8179744-8179890:-1:exon

position:8179744:-1
position: 8179744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8179890:-1
position: 8179890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8179463-8179563:-1:exon

position:8179463:-1
position: 8179463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8179563:-1
position: 8179563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8179288-8179354:-1:exon

position:8179288:-1
position: 8179288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8179354:-1
position: 8179354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8178672-8178764:-1:exon

position:8178672:-1
position: 8178672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8178764:-1
position: 8178764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8178191-8178259:-1:exon

position:8178191:-1
position: 8178191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8178259:-1
position: 8178259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8176798-8176880:-1:exon

position:8176798:-1
position: 8176798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8176880:-1
position: 8176880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8175002-8175110:-1:exon

position:8175002:-1
position: 8175002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8175110:-1
position: 8175110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8172974-8173054:-1:exon

position:8172974:-1
position: 8172974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8173054:-1
position: 8173054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:8142698-8142822:-1:exon

position:8142698:-1
position: 8142698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8142822:-1
position: 8142822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:8142452-8142566:-1:exon

position:8142452:-1
position: 8142452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8142566:-1
position: 8142566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:8140767-8140873:-1:exon

position:8140767:-1
position: 8140767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8140873:-1
position: 8140873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:8139171-8139398:-1:exon

position:8139171:-1
position: 8139171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8139398:-1
position: 8139398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:8138205-8138253:-1:exon

position:8138205:-1
position: 8138205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8138253:-1
position: 8138253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:8136675-8137571:-1:exon

position:8136675:-1
position: 8136675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8137571:-1
position: 8137571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:8135678-8135801:-1:exon

position:8135678:-1
position: 8135678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8135801:-1
position: 8135801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:8132641-8132884:-1:exon

position:8132641:-1
position: 8132641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8132884:-1
position: 8132884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:8125183-8125278:-1:exon

position:8125183:-1
position: 8125183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8125278:-1
position: 8125278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:8122621-8122714:-1:exon

position:8122621:-1
position: 8122621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8122714:-1
position: 8122714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:8121648-8121703:-1:exon

position:8121648:-1
position: 8121648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8121703:-1
position: 8121703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:8119066-8119208:-1:exon

position:8119066:-1
position: 8119066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8119208:-1
position: 8119208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:8118073-8118267:-1:exon

position:8118073:-1
position: 8118073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8118267:-1
position: 8118267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:8116832-8116989:-1:exon

position:8116832:-1
position: 8116832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8116989:-1
position: 8116989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:8114746-8114869:-1:exon

position:8114746:-1
position: 8114746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8114869:-1
position: 8114869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:8113658-8113955:-1:exon

position:8113658:-1
position: 8113658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8113955:-1
position: 8113955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:8112470-8112677:-1:exon

position:8112470:-1
position: 8112470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8112677:-1
position: 8112677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:8111577-8111713:-1:exon

position:8111577:-1
position: 8111577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8111713:-1
position: 8111713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:8110618-8110738:-1:exon

position:8110618:-1
position: 8110618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8110738:-1
position: 8110738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:8109731-8110183:-1:exon

position:8109731:-1
position: 8109731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8110183:-1
position: 8110183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:8106579-8106770:-1:exon

position:8106579:-1
position: 8106579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8106770:-1
position: 8106770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:8103213-8104666:-1:exon

position:8104666:-1
position: 8104666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Myo10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Myo10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-X
translation: MDSFFPEGTRVWLRENGQHFPSTVNSCAEGVVVFQTDYGQVFTYKQSTITHQKVTAMHPMNEEGVDDMASLTELHGGSIMYNLFQRYKRNQIYTYIGSIIASVNPYQPIAGLYERATMELYSRCHLGELPPHIFAIANECYRCLWKRYDNQCILISGESGAGKTESTKLILKFLSVISQHSLDLSLQEKTSCVEQAILQSSPIMEAFGNAKTVYNNNSSRFGKFVQLNICQKGNIQGGRIVDYLLEKNRVVRQNPGERNYHIFYALLAGLEQREREEFYLSLPENYHYLNQSGCIEDKTISDQESFRQVITAMDVMQFSKEEVREVLRLLAGILHLGNIEFITAGGAQVSFKTALGRSAELLGLDPTQLTDALTQRSMFLRGEEILTPLSVQQAVDSRDSLAMALYARCFEWVIKKINSRIKGKEDFKSIGILDIFGFENFEVNHFEQFNINYANEKLQEYFNKHIFSLEQLEYSREGLVWEDIDWIDNGECLDLIEKKLGLLALINEESHFPQATDSTLLEKLHNQHANNHFYVKPRVAVNNFGVKHYAGEVQYDVRGILEKNRDTFRDDLLNLLRESRFDFIYDLFEHVSSRNNQDTLKCGSKHRRPTVSSQFKDSLHSLMATLSSSNPFFVRCLKPNTQKMPDQFDQAVVLNQLRYSGMLETVRIRKAGYAVRRPFQDFYKRYKVLMRNLALPEDIRGKCTVLLQLYDASNSQWQLGKTKVFLRESLEQKLEKRREEELNRAAMVIRAHILGYLARKQYRKVLCGVVTIQKNYRAFLVRKRFLHLRKAAIVFQKQLRGQLARRLYRQLLAEKQEREERKRREEERKREEEERERERAQREADLLRAQQEEEARRQQELEALQKSQTEADATRELEKQRENKQVEEILRLEKEIEDLQRMKERQELSLTEASLQKLQQLRDEELRRLEDEACRAAQEFLESLNFDEIDECVRNIERSLSVGSEVSGGLSELAETPAAAAGEKPSFNFSQPYPEEEVDEGFEADDDAFKDSPNPSEHGHSDQRTSGIRTSDDSSEEDPYMNYTVVPTSPSADSTVLLAASGQDSASLHNSSSGESTYCMPQNSGGDLPSPDGDYDYDQDDYEDGAITSGSSVTFSNSYGSQWSPDYRYSVGTYNSSGAYRFSSEGAQSSFEDSEEDFDSRFDTDDELSYRRDSVYSCVTLPYFHSFLYMKGGLMNSWKRRWCVLKDETFLWFRSKQEALKQGWLHKKGGGSSTLSRRNWKRRWFVLRQSKLMYFENDSEEKLKGTVEVRTAKEIIDNTSKENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHSSTDQEIREMHDEQANPQNAVGTLDVGLIDSVCASDSPDRPNSFVIITANRVLHCNADTPEEMHHWITLLQRSKGDTRVEGQEFIVRGWLHKEVKNSPKMSSLKLKKRWFVLTHNSLDYYKSSEKNALKLGTLVLNSLCSVVPPDEKIFKETGYWNVTVYGRKHCYRLYTKLLNEATRWSSAIQNVTDTKAPIDTPTQQLIQDIKENCLNSDVVEQIYKRNPILRYTHHPLHSPLLPLPYGDINLNLLKDKGYTTLQDEAIKIFNSLQQLESMSDPIPIIQGILQTGHDLRPLRDELYCQLIKQTNKVPHPGSVGNLYSWQILTCLSCTFLPSRGILKYLKFHLKRIREQFPGTEMEKYALFIYESLKKTKCREFVPSRDEIEALIHRQEMTSTVYCHGGGSCKITINSHTTAGEVVEKLIRGLAMEDSRNMFALFEYNGHVDKAIESRTIVADVLAKFEKLAATSEAGDSPWKFYFKLYCFLDTDSVPKDSVEFAFMFEQAHEAVIHGHHPAPEENLQVLAALRLQYLQGDYTLHTSVPPLEEVYSLQRLKARISQSTKTFTPYERLEKRRTSFLEGTLRRSFRTGAVVRQKVEEEQMLDMWIKEEVGSARASIIDKWKKLQGMNQEQAMAKYMALIKEWPGYGSTLFDVECKEGGFPQELWLGVSADAVSVYKRGEGRPLEVF…
SIO_010081: Myo10
subclass of: SO_0000673
so part of: Myo10
location: complement(join(8104565..8104666,8106579..8106770,8109731..8110183,8110618..8110738,8111577..8111713,8112470..8112677,8113658..8113955,8114746..8114869,8116832..8116989,8118073..8118267,8119066..8119208,8121648..8121703,8122621..8122714,8125183..8125278,8132641..8132884,8135678..8135801,8136675..8137571,8138205..8138253,8139171..8139398,8140767..8140873,8142452..8142566,8142698..8142822,8172974..8173054,8175002..8175110,8176798..8176880,8178191..8178259,8178672..8178764,8179288..8179354,8179463..8179563,8179744..8179890,8182245..8182363,8186031..8186160,8193144..8193247,8194346..8194430,8194554..8194567,8195486..8195610,8197130..8197264,8205501..8205688,8222059..8222217,8260407..8260505,8316226..8316246))
location: region:8104565-8316246:-1
so has part: feature:8316226-8316246:-1:exon
so has part: feature:8260407-8260505:-1:exon
so has part: feature:8222059-8222217:-1:exon
so has part: feature:8205501-8205688:-1:exon
so has part: feature:8197130-8197264:-1:exon
so has part: feature:8195486-8195610:-1:exon
so has part: feature:8194554-8194567:-1:exon
so has part: feature:8194346-8194430:-1:exon
so has part: feature:8193144-8193247:-1:exon
so has part: feature:8186031-8186160:-1:exon
so has part: feature:8182245-8182363:-1:exon
so has part: feature:8179744-8179890:-1:exon
so has part: feature:8179463-8179563:-1:exon
so has part: feature:8179288-8179354:-1:exon
so has part: feature:8178672-8178764:-1:exon
so has part: feature:8178191-8178259:-1:exon
so has part: feature:8176798-8176880:-1:exon
so has part: feature:8175002-8175110:-1:exon
so has part: feature:8172974-8173054:-1:exon
so has part: feature:8142698-8142822:-1:exon
so has part: feature:8142452-8142566:-1:exon
so has part: feature:8140767-8140873:-1:exon
so has part: feature:8139171-8139398:-1:exon
so has part: feature:8138205-8138253:-1:exon
so has part: feature:8136675-8137571:-1:exon
so has part: feature:8135678-8135801:-1:exon
so has part: feature:8132641-8132884:-1:exon
so has part: feature:8125183-8125278:-1:exon
so has part: feature:8122621-8122714:-1:exon
so has part: feature:8121648-8121703:-1:exon
so has part: feature:8119066-8119208:-1:exon
so has part: feature:8118073-8118267:-1:exon
so has part: feature:8116832-8116989:-1:exon
so has part: feature:8114746-8114869:-1:exon
so has part: feature:8113658-8113955:-1:exon
so has part: feature:8112470-8112677:-1:exon
so has part: feature:8111577-8111713:-1:exon
so has part: feature:8110618-8110738:-1:exon
so has part: feature:8109731-8110183:-1:exon
so has part: feature:8106579-8106770:-1:exon
so has part: feature:8104565-8104666:-1:exon

XP_028724009.1
type: Protein
SIO_000068: ncbiprotein

position:8104565:-1
position: 8104565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8316246:-1
position: 8316246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8316226-8316246:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8260407-8260505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8222059-8222217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8205501-8205688:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8197130-8197264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8195486-8195610:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8194554-8194567:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8194346-8194430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8193144-8193247:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8186031-8186160:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8182245-8182363:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8179744-8179890:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8179463-8179563:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8179288-8179354:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8178672-8178764:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8178191-8178259:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8176798-8176880:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8175002-8175110:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8172974-8173054:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8142698-8142822:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8142452-8142566:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:8140767-8140873:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:8139171-8139398:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:8138205-8138253:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:8136675-8137571:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:8135678-8135801:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:8132641-8132884:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:8125183-8125278:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:8122621-8122714:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:8121648-8121703:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:8119066-8119208:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:8118073-8118267:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:8116832-8116989:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:8114746-8114869:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:8113658-8113955:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:8112470-8112677:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:8111577-8111713:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:8110618-8110738:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:8109731-8110183:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:8106579-8106770:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:8104565-8104666:-1:exon

LOC114692465
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114692465
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 8213162..8213350
location: region:8213162-8213350:1
so has part: feature:8213162-8213350:1:exon
subclass of: SO_0000623

114692465
type: Gene
SIO_000068: ncbigene

position:8213162:1
position: 8213162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8213350:1
position: 8213350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8213162-8213350:1:exon

LOC114692465
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: snRNA
gene: LOC114692465
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003734421.1
SIO_010081: LOC114692465
subclass of: SO_0000673
so part of: LOC114692465
location: 8213162..8213350
location: region:8213162-8213350:1
so has part: feature:8213162-8213350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8213162-8213350:1:exon

LOC119088751
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119088751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8435639..8437325)
location: region:8435639-8437325:-1
so has part: feature:8435639-8437325:-1:exon
subclass of: SO_0000011

119088751
type: Gene
SIO_000068: ncbigene

position:8435639:-1
position: 8435639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8437325:-1
position: 8437325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8435639-8437325:-1:exon

LOC119088751
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119088751
product: uncharacterized LOC119088751
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005092471.1
SIO_010081: LOC119088751
subclass of: SO_0000673
so part of: LOC119088751
location: complement(join(8435639..8436074,8437155..8437325))
location: region:8435639-8437325:-1
so has part: feature:8437155-8437325:-1:exon
so has part: feature:8435639-8436074:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8437155-8437325:-1:exon

position:8437155:-1
position: 8437155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8435639-8436074:-1:exon

position:8436074:-1
position: 8436074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Basp1
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Basp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8585041..8593203
location: region:8585041-8593203:1
so has part: feature:8585041-8593203:1:exon
subclass of: SO_0000010

114692454
type: Gene
SIO_000068: ncbigene

position:8585041:1
position: 8585041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8593203:1
position: 8593203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8585041-8593203:1:exon

Basp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Basp1
product: brain abundant membrane attached signal protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_037209373.1
SIO_010081: Basp1
subclass of: SO_0000673
so part of: Basp1
location: join(8585041..8585298,8592460..8593203)
location: region:8585041-8593203:1
so has part: feature:8585041-8585298:1:exon
so has part: feature:8592460-8593203:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8585041-8585298:1:exon

position:8585298:1
position: 8585298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8592460-8593203:1:exon

position:8592460:1
position: 8592460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Basp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Basp1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: brain acid soluble protein 1
translation: MPCETAGLRFGNMRALCAWVTLPEALRTMSSLWTVLEDALEEADGRMNSKMGGKLSKKKKGYNVNDEKAKDKDKKAEGAGTEEEGTPKESEPQAAADAAEVKESAEEKPKDAAADGEAKAEEKEGDKAAAKEEAPKAEPEKSEGAAEEQPEPAPAPEQEAAAPGPAAGGEVPKAGGDTTGAESTGAPPDGAAKEEGEAKKTEAPAAAGPXTKSDAAPASDSKPSSAAEPAPSSKETPAAASEAPSSAAKAPAPAAPATATATEPQAEPVPAASSEQSVAVKE
SIO_010081: Basp1
subclass of: SO_0000673
so part of: Basp1
location: join(8585158..8585298,8592460..8593168)
location: region:8585158-8593168:1
so has part: feature:8585158-8585298:1:exon
so has part: feature:8592460-8593168:1:exon

XP_037065268.1
type: Protein
SIO_000068: ncbiprotein

position:8585158:1
position: 8585158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8593168:1
position: 8593168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8585158-8585298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8592460-8593168:1:exon

LOC119088708
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC119088708
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8882649..8888858
location: region:8882649-8888858:1
so has part: feature:8882649-8888858:1:exon
subclass of: SO_0000011

119088708
type: Gene
SIO_000068: ncbigene

position:8882649:1
position: 8882649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8888858:1
position: 8888858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8882649-8888858:1:exon

LOC119088708
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: lncRNA
gene: LOC119088708
product: uncharacterized LOC119088708
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XR_005092403.1
SIO_010081: LOC119088708
subclass of: SO_0000673
so part of: LOC119088708
location: join(8882649..8883197,8887675..8888858)
location: region:8882649-8888858:1
so has part: feature:8882649-8883197:1:exon
so has part: feature:8887675-8888858:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8882649-8883197:1:exon

position:8883197:1
position: 8883197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8887675-8888858:1:exon

position:8887675:1
position: 8887675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114692466
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114692466
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(8910370..8910512)
location: region:8910370-8910512:-1
so has part: feature:8910370-8910512:-1:exon

114692466
type: Gene
SIO_000068: ncbigene

position:8910370:-1
position: 8910370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8910512:-1
position: 8910512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8910370-8910512:-1:exon

LOC114692466
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114692466
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC114692466
subclass of: SO_0000673
so part of: LOC114692466
location: complement(8910370..8910512)
location: region:8910370-8910512:-1
so has part: feature:8910370-8910512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8910370-8910512:-1:exon

LOC114692437
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114692437
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8977102..8977582
location: region:8977102-8977582:1
so has part: feature:8977102-8977582:1:exon

114692437
type: Gene
SIO_000068: ncbigene

position:8977102:1
position: 8977102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8977582:1
position: 8977582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8977102-8977582:1:exon

LOC114692437
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114692437
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC114692437
subclass of: SO_0000673
so part of: LOC114692437
location: 8977102..8977582
location: region:8977102-8977582:1
so has part: feature:8977102-8977582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8977102-8977582:1:exon

LOC114692463
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114692463
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 9066271..9066433
location: region:9066271-9066433:1
so has part: feature:9066271-9066433:1:exon
subclass of: SO_0000623

114692463
type: Gene
SIO_000068: ncbigene

position:9066271:1
position: 9066271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9066433:1
position: 9066433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9066271-9066433:1:exon

LOC114692463
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: snRNA
gene: LOC114692463
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003734419.1
SIO_010081: LOC114692463
subclass of: SO_0000673
so part of: LOC114692463
location: 9066271..9066433
location: region:9066271-9066433:1
so has part: feature:9066271-9066433:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9066271-9066433:1:exon

LOC114692438
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114692438
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9652206..9824682
location: region:9652206-9824682:1
so has part: feature:9652206-9824682:1:exon

114692438
type: Gene
SIO_000068: ncbigene

position:9652206:1
position: 9652206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9824682:1
position: 9824682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9652206-9824682:1:exon

LOC114692438
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114692438
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC114692438
subclass of: SO_0000673
so part of: LOC114692438
location: 9652206..9652247
location: region:9652206-9652247:1
so has part: feature:9652206-9652247:1:exon

position:9652247:1
position: 9652247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9652206-9652247:1:exon

LOC114692438
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114692438
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC114692438
subclass of: SO_0000673
so part of: LOC114692438
location: 9653571..9653948
location: region:9653571-9653948:1
so has part: feature:9653571-9653948:1:exon

position:9653571:1
position: 9653571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9653948:1
position: 9653948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9653571-9653948:1:exon

LOC114692438
type: Exon
subclass of: SO_0000147
RO_0002162: 10041
gene: LOC114692438
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC114692438
subclass of: SO_0000673
so part of: LOC114692438
location: 9823376..9824682
location: region:9823376-9824682:1
so has part: feature:9823376-9824682:1:exon

position:9823376:1
position: 9823376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9823376-9824682:1:exon

LOC114692439
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114692439
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10074225..10080844)
location: region:10074225-10080844:-1
so has part: feature:10074225-10080844:-1:exon
subclass of: SO_0000010

114692439
type: Gene
SIO_000068: ncbigene

position:10074225:-1
position: 10074225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10080844:-1
position: 10080844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10074225-10080844:-1:exon

LOC114692439
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114692439
product: 6-phosphogluconate dehydrogenase, decarboxylating-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037209579.1
SIO_010081: LOC114692439
subclass of: SO_0000673
so part of: LOC114692439
location: complement(join(10074225..10075434,10080767..10080844))
location: region:10074225-10080844:-1
so has part: feature:10080767-10080844:-1:exon
so has part: feature:10074225-10075434:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10080767-10080844:-1:exon

position:10080767:-1
position: 10080767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10074225-10075434:-1:exon

position:10075434:-1
position: 10075434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114692439
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114692439
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 6-phosphogluconate dehydrogenase, decarboxylating-like
translation: MEYYIASSNSHFYSTINYIRNILDYQKQFGDRETLSQKTNEKRISGPLGEAVFARCLSSLKEERVQASKTLKGPQQVQLEGSKESFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGAIALMWRGGCIIRSVFLGKIKDAFEQNPALQNLLLDDFFKSAVDNCQDSWRRVVSTGVQAGIPMPCFTTALSFYDGYRHEVLPANLIQAQRDYFGAHTYELLDKPGEFIHTNWTGHGGSVSSSAYNA
SIO_010081: LOC114692439
subclass of: SO_0000673
so part of: LOC114692439
location: complement(join(10074760..10075434,10080767..10080844))
location: region:10074760-10080844:-1
so has part: feature:10080767-10080844:-1:exon
so has part: feature:10074760-10075434:-1:exon

XP_037065474.1
type: Protein
SIO_000068: ncbiprotein

position:10074760:-1
position: 10074760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10080767-10080844:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10074760-10075434:-1:exon

Cdh18
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Cdh18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10226078..11113067)
location: region:10226078-11113067:-1
so has part: feature:10226078-11113067:-1:exon
subclass of: SO_0000010

114692455
type: Gene
SIO_000068: ncbigene

position:10226078:-1
position: 10226078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11113067:-1
position: 11113067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10226078-11113067:-1:exon

Cdh18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cdh18
product: cadherin 18, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_028868189.2
SIO_010081: Cdh18
subclass of: SO_0000673
so part of: Cdh18
location: complement(join(10226078..10227453,10231926..10232177,10248077..10248194,10257037..10257158,10279294..10279430,10289370..10289623,10292560..10292845))
location: region:10226078-10292845:-1
so has part: feature:10292560-10292845:-1:exon
so has part: feature:10289370-10289623:-1:exon
so has part: feature:10279294-10279430:-1:exon
so has part: feature:10257037-10257158:-1:exon
so has part: feature:10248077-10248194:-1:exon
so has part: feature:10231926-10232177:-1:exon
so has part: feature:10226078-10227453:-1:exon

position:10292845:-1
position: 10292845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10292560-10292845:-1:exon

position:10292560:-1
position: 10292560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10289370-10289623:-1:exon

position:10289370:-1
position: 10289370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10289623:-1
position: 10289623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10279294-10279430:-1:exon

position:10279294:-1
position: 10279294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10279430:-1
position: 10279430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10257037-10257158:-1:exon

position:10257037:-1
position: 10257037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10257158:-1
position: 10257158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10248077-10248194:-1:exon

position:10248077:-1
position: 10248077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10248194:-1
position: 10248194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10231926-10232177:-1:exon

position:10231926:-1
position: 10231926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10232177:-1
position: 10232177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10226078-10227453:-1:exon

position:10227453:-1
position: 10227453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cdh18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cdh18
product: cadherin 18, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_028868182.2
SIO_010081: Cdh18
subclass of: SO_0000673
so part of: Cdh18
location: complement(join(10226089..10227453,10231926..10232177,10248077..10248194,10257037..10257158,10279294..10279430,10289370..10289623,10309254..10309441,10318208..10318375,10413890..10414009,10437853..10438147,10504999..10505477,10846557..10846616,11112798..11113067))
location: region:10226089-11113067:-1
so has part: feature:11112798-11113067:-1:exon
so has part: feature:10846557-10846616:-1:exon
so has part: feature:10504999-10505477:-1:exon
so has part: feature:10437853-10438147:-1:exon
so has part: feature:10413890-10414009:-1:exon
so has part: feature:10318208-10318375:-1:exon
so has part: feature:10309254-10309441:-1:exon
so has part: feature:10289370-10289623:-1:exon
so has part: feature:10279294-10279430:-1:exon
so has part: feature:10257037-10257158:-1:exon
so has part: feature:10248077-10248194:-1:exon
so has part: feature:10231926-10232177:-1:exon
so has part: feature:10226089-10227453:-1:exon

position:10226089:-1
position: 10226089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11112798-11113067:-1:exon

position:11112798:-1
position: 11112798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10846557-10846616:-1:exon

position:10846557:-1
position: 10846557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10846616:-1
position: 10846616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10504999-10505477:-1:exon

position:10504999:-1
position: 10504999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10505477:-1
position: 10505477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10437853-10438147:-1:exon

position:10437853:-1
position: 10437853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10438147:-1
position: 10438147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10413890-10414009:-1:exon

position:10413890:-1
position: 10413890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10414009:-1
position: 10414009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10318208-10318375:-1:exon

position:10318208:-1
position: 10318208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10318375:-1
position: 10318375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10309254-10309441:-1:exon

position:10309254:-1
position: 10309254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10309441:-1
position: 10309441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10289370-10289623:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10279294-10279430:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10257037-10257158:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10248077-10248194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10231926-10232177:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10226089-10227453:-1:exon

Cdh18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cdh18
product: cadherin 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_028868181.2
SIO_010081: Cdh18
subclass of: SO_0000673
so part of: Cdh18
location: complement(join(10226089..10227453,10231926..10232177,10248077..10248194,10257037..10257158,10279294..10279430,10289370..10289623,10309254..10309441,10318208..10318375,10413890..10414009,10437853..10438147,10504999..10505477,10846557..10846621,11112798..11113067))
location: region:10226089-11113067:-1
so has part: feature:11112798-11113067:-1:exon
so has part: feature:10846557-10846621:-1:exon
so has part: feature:10504999-10505477:-1:exon
so has part: feature:10437853-10438147:-1:exon
so has part: feature:10413890-10414009:-1:exon
so has part: feature:10318208-10318375:-1:exon
so has part: feature:10309254-10309441:-1:exon
so has part: feature:10289370-10289623:-1:exon
so has part: feature:10279294-10279430:-1:exon
so has part: feature:10257037-10257158:-1:exon
so has part: feature:10248077-10248194:-1:exon
so has part: feature:10231926-10232177:-1:exon
so has part: feature:10226089-10227453:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11112798-11113067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10846557-10846621:-1:exon

position:10846621:-1
position: 10846621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10504999-10505477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10437853-10438147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10413890-10414009:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10318208-10318375:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10309254-10309441:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10289370-10289623:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10279294-10279430:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10257037-10257158:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10248077-10248194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10231926-10232177:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10226089-10227453:-1:exon

Cdh18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cdh18
product: cadherin 18, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_028868183.2
SIO_010081: Cdh18
subclass of: SO_0000673
so part of: Cdh18
location: complement(join(10226089..10227453,10231926..10232177,10248077..10248194,10257037..10257158,10279294..10279430,10289370..10289623,10309254..10309441,10318208..10318375,10413890..10414009,10437853..10438147,10504999..10505477,10846557..10846616,10894446..10895049))
location: region:10226089-10895049:-1
so has part: feature:10894446-10895049:-1:exon
so has part: feature:10846557-10846616:-1:exon
so has part: feature:10504999-10505477:-1:exon
so has part: feature:10437853-10438147:-1:exon
so has part: feature:10413890-10414009:-1:exon
so has part: feature:10318208-10318375:-1:exon
so has part: feature:10309254-10309441:-1:exon
so has part: feature:10289370-10289623:-1:exon
so has part: feature:10279294-10279430:-1:exon
so has part: feature:10257037-10257158:-1:exon
so has part: feature:10248077-10248194:-1:exon
so has part: feature:10231926-10232177:-1:exon
so has part: feature:10226089-10227453:-1:exon

position:10895049:-1
position: 10895049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10894446-10895049:-1:exon

position:10894446:-1
position: 10894446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10846557-10846616:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10504999-10505477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10437853-10438147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10413890-10414009:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10318208-10318375:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10309254-10309441:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10289370-10289623:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10279294-10279430:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10257037-10257158:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10248077-10248194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10231926-10232177:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10226089-10227453:-1:exon

Cdh18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cdh18
product: cadherin 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_028868180.2
SIO_010081: Cdh18
subclass of: SO_0000673
so part of: Cdh18
location: complement(join(10226089..10227453,10231926..10232177,10248077..10248194,10257037..10257158,10279294..10279430,10289370..10289623,10309254..10309441,10318208..10318375,10413890..10414009,10437853..10438147,10504999..10505477,10640936..10641741))
location: region:10226089-10641741:-1
so has part: feature:10640936-10641741:-1:exon
so has part: feature:10504999-10505477:-1:exon
so has part: feature:10437853-10438147:-1:exon
so has part: feature:10413890-10414009:-1:exon
so has part: feature:10318208-10318375:-1:exon
so has part: feature:10309254-10309441:-1:exon
so has part: feature:10289370-10289623:-1:exon
so has part: feature:10279294-10279430:-1:exon
so has part: feature:10257037-10257158:-1:exon
so has part: feature:10248077-10248194:-1:exon
so has part: feature:10231926-10232177:-1:exon
so has part: feature:10226089-10227453:-1:exon

position:10641741:-1
position: 10641741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10640936-10641741:-1:exon

position:10640936:-1
position: 10640936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10504999-10505477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10437853-10438147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10413890-10414009:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10318208-10318375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10309254-10309441:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10289370-10289623:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10279294-10279430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10257037-10257158:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10248077-10248194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10231926-10232177:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10226089-10227453:-1:exon

Cdh18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cdh18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-18 isoform X1
translation: MRITSTSCICPVLVCLCFVQRCYGTAHHSSIKVTRNQTKHTEGETEVHHRPKRGWVWNQFFVLEEHMGPDPQYVGKLHSNSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYVLHAQAIDRRTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVDPKTGVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSITNGDGIGIFSISTDKDTREGILSLKKPLNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIVGDVNEPPLFSMPSYVMDVYENAKIGTIVGTVLAQDPDSANSLVRYFINHSAEEDRFFNIDANTGTIKTSKVLDREETPWYNITVMASENDNPDLLSHVSVGIRVLDVNDNPPELAREYDIVVCENSKPGQVIHTITATDKDDFANGPRFNFFLDERLPVNPNFTLKDNEDNTASILTRRRRFSRTVQDVYYLPIMISDGGIPSLSSSSTLTIRVCACERDGRVRTCHAEAFLSSAGLSTGALIAILLCVVILLAIVVLFITLRRSKKEPLIISEEDVRENVVTYDDEGGGEEDTEAFDITALRNPSAAEEFKYRRDIRPEVKLTPRHPTLSTLESIDVQEFIKQRLAEADLDPSVPPYDSLQTYAYEGQRSEAGSISSLDSATTQSDQDYHYLGDWGPEFKKLAELYGEMESERTT
SIO_010081: Cdh18
subclass of: SO_0000673
so part of: Cdh18
location: complement(join(10226963..10227453,10231926..10232177,10248077..10248194,10257037..10257158,10279294..10279430,10289370..10289623,10309254..10309441,10318208..10318375,10413890..10414009,10437853..10438147,10504999..10505226))
location: region:10226963-10505226:-1
so has part: feature:10504999-10505226:-1:exon
so has part: feature:10437853-10438147:-1:exon
so has part: feature:10413890-10414009:-1:exon
so has part: feature:10318208-10318375:-1:exon
so has part: feature:10309254-10309441:-1:exon
so has part: feature:10289370-10289623:-1:exon
so has part: feature:10279294-10279430:-1:exon
so has part: feature:10257037-10257158:-1:exon
so has part: feature:10248077-10248194:-1:exon
so has part: feature:10231926-10232177:-1:exon
so has part: feature:10226963-10227453:-1:exon

XP_028724013.1
type: Protein
SIO_000068: ncbiprotein

position:10226963:-1
position: 10226963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10505226:-1
position: 10505226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10504999-10505226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10437853-10438147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10413890-10414009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10318208-10318375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10309254-10309441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10289370-10289623:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10279294-10279430:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10257037-10257158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10248077-10248194:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10231926-10232177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10226963-10227453:-1:exon

Cdh18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cdh18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-18 isoform X1
translation: MRITSTSCICPVLVCLCFVQRCYGTAHHSSIKVTRNQTKHTEGETEVHHRPKRGWVWNQFFVLEEHMGPDPQYVGKLHSNSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYVLHAQAIDRRTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVDPKTGVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSITNGDGIGIFSISTDKDTREGILSLKKPLNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIVGDVNEPPLFSMPSYVMDVYENAKIGTIVGTVLAQDPDSANSLVRYFINHSAEEDRFFNIDANTGTIKTSKVLDREETPWYNITVMASENDNPDLLSHVSVGIRVLDVNDNPPELAREYDIVVCENSKPGQVIHTITATDKDDFANGPRFNFFLDERLPVNPNFTLKDNEDNTASILTRRRRFSRTVQDVYYLPIMISDGGIPSLSSSSTLTIRVCACERDGRVRTCHAEAFLSSAGLSTGALIAILLCVVILLAIVVLFITLRRSKKEPLIISEEDVRENVVTYDDEGGGEEDTEAFDITALRNPSAAEEFKYRRDIRPEVKLTPRHPTLSTLESIDVQEFIKQRLAEADLDPSVPPYDSLQTYAYEGQRSEAGSISSLDSATTQSDQDYHYLGDWGPEFKKLAELYGEMESERTT
SIO_010081: Cdh18
subclass of: SO_0000673
so part of: Cdh18
location: complement(join(10226963..10227453,10231926..10232177,10248077..10248194,10257037..10257158,10279294..10279430,10289370..10289623,10309254..10309441,10318208..10318375,10413890..10414009,10437853..10438147,10504999..10505226))
location: region:10226963-10505226:-1
so has part: feature:10504999-10505226:-1:exon
so has part: feature:10437853-10438147:-1:exon
so has part: feature:10413890-10414009:-1:exon
so has part: feature:10318208-10318375:-1:exon
so has part: feature:10309254-10309441:-1:exon
so has part: feature:10289370-10289623:-1:exon
so has part: feature:10279294-10279430:-1:exon
so has part: feature:10257037-10257158:-1:exon
so has part: feature:10248077-10248194:-1:exon
so has part: feature:10231926-10232177:-1:exon
so has part: feature:10226963-10227453:-1:exon

XP_028724014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10504999-10505226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10437853-10438147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10413890-10414009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10318208-10318375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10309254-10309441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10289370-10289623:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10279294-10279430:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10257037-10257158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10248077-10248194:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10231926-10232177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10226963-10227453:-1:exon

Cdh18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cdh18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-18 isoform X1
translation: MRITSTSCICPVLVCLCFVQRCYGTAHHSSIKVTRNQTKHTEGETEVHHRPKRGWVWNQFFVLEEHMGPDPQYVGKLHSNSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYVLHAQAIDRRTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVDPKTGVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSITNGDGIGIFSISTDKDTREGILSLKKPLNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIVGDVNEPPLFSMPSYVMDVYENAKIGTIVGTVLAQDPDSANSLVRYFINHSAEEDRFFNIDANTGTIKTSKVLDREETPWYNITVMASENDNPDLLSHVSVGIRVLDVNDNPPELAREYDIVVCENSKPGQVIHTITATDKDDFANGPRFNFFLDERLPVNPNFTLKDNEDNTASILTRRRRFSRTVQDVYYLPIMISDGGIPSLSSSSTLTIRVCACERDGRVRTCHAEAFLSSAGLSTGALIAILLCVVILLAIVVLFITLRRSKKEPLIISEEDVRENVVTYDDEGGGEEDTEAFDITALRNPSAAEEFKYRRDIRPEVKLTPRHPTLSTLESIDVQEFIKQRLAEADLDPSVPPYDSLQTYAYEGQRSEAGSISSLDSATTQSDQDYHYLGDWGPEFKKLAELYGEMESERTT
SIO_010081: Cdh18
subclass of: SO_0000673
so part of: Cdh18
location: complement(join(10226963..10227453,10231926..10232177,10248077..10248194,10257037..10257158,10279294..10279430,10289370..10289623,10309254..10309441,10318208..10318375,10413890..10414009,10437853..10438147,10504999..10505226))
location: region:10226963-10505226:-1
so has part: feature:10504999-10505226:-1:exon
so has part: feature:10437853-10438147:-1:exon
so has part: feature:10413890-10414009:-1:exon
so has part: feature:10318208-10318375:-1:exon
so has part: feature:10309254-10309441:-1:exon
so has part: feature:10289370-10289623:-1:exon
so has part: feature:10279294-10279430:-1:exon
so has part: feature:10257037-10257158:-1:exon
so has part: feature:10248077-10248194:-1:exon
so has part: feature:10231926-10232177:-1:exon
so has part: feature:10226963-10227453:-1:exon

XP_028724015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10504999-10505226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10437853-10438147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10413890-10414009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10318208-10318375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10309254-10309441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10289370-10289623:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10279294-10279430:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10257037-10257158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10248077-10248194:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10231926-10232177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10226963-10227453:-1:exon

Cdh18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cdh18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-18 isoform X1
translation: MRITSTSCICPVLVCLCFVQRCYGTAHHSSIKVTRNQTKHTEGETEVHHRPKRGWVWNQFFVLEEHMGPDPQYVGKLHSNSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYVLHAQAIDRRTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVDPKTGVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSITNGDGIGIFSISTDKDTREGILSLKKPLNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIVGDVNEPPLFSMPSYVMDVYENAKIGTIVGTVLAQDPDSANSLVRYFINHSAEEDRFFNIDANTGTIKTSKVLDREETPWYNITVMASENDNPDLLSHVSVGIRVLDVNDNPPELAREYDIVVCENSKPGQVIHTITATDKDDFANGPRFNFFLDERLPVNPNFTLKDNEDNTASILTRRRRFSRTVQDVYYLPIMISDGGIPSLSSSSTLTIRVCACERDGRVRTCHAEAFLSSAGLSTGALIAILLCVVILLAIVVLFITLRRSKKEPLIISEEDVRENVVTYDDEGGGEEDTEAFDITALRNPSAAEEFKYRRDIRPEVKLTPRHPTLSTLESIDVQEFIKQRLAEADLDPSVPPYDSLQTYAYEGQRSEAGSISSLDSATTQSDQDYHYLGDWGPEFKKLAELYGEMESERTT
SIO_010081: Cdh18
subclass of: SO_0000673
so part of: Cdh18
location: complement(join(10226963..10227453,10231926..10232177,10248077..10248194,10257037..10257158,10279294..10279430,10289370..10289623,10309254..10309441,10318208..10318375,10413890..10414009,10437853..10438147,10504999..10505226))
location: region:10226963-10505226:-1
so has part: feature:10504999-10505226:-1:exon
so has part: feature:10437853-10438147:-1:exon
so has part: feature:10413890-10414009:-1:exon
so has part: feature:10318208-10318375:-1:exon
so has part: feature:10309254-10309441:-1:exon
so has part: feature:10289370-10289623:-1:exon
so has part: feature:10279294-10279430:-1:exon
so has part: feature:10257037-10257158:-1:exon
so has part: feature:10248077-10248194:-1:exon
so has part: feature:10231926-10232177:-1:exon
so has part: feature:10226963-10227453:-1:exon

XP_028724016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10504999-10505226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10437853-10438147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10413890-10414009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10318208-10318375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10309254-10309441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10289370-10289623:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10279294-10279430:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10257037-10257158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10248077-10248194:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10231926-10232177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10226963-10227453:-1:exon

Cdh18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cdh18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-18 isoform X4
translation: MLKIIVGDVNEPPLFSMPSYVMDVYENAKIGTIVGTVLAQDPDSANSLVRYFINHSAEEDRFFNIDANTGTIKTSKVLDREETPWYNITVMASENDNPDLLSHVSVGIRVLDVNDNPPELAREYDIVVCENSKPGQVIHTITATDKDDFANGPRFNFFLDERLPVNPNFTLKDNEDNTASILTRRRRFSRTVQDVYYLPIMISDGGIPSLSSSSTLTIRVCACERDGRVRTCHAEAFLSSAGLSTGALIAILLCVVILLAIVVLFITLRRSKKEPLIISEEDVRENVVTYDDEGGGEEDTEAFDITALRNPSAAEEFKYRRDIRPEVKLTPRHPTLSTLESIDVQEFIKQRLAEADLDPSVPPYDSLQTYAYEGQRSEAGSISSLDSATTQSDQDYHYLGDWGPEFKKLAELYGEMESERTT
SIO_010081: Cdh18
subclass of: SO_0000673
so part of: Cdh18
location: complement(join(10226963..10227453,10231926..10232177,10248077..10248194,10257037..10257158,10279294..10279430,10289370..10289518))
location: region:10226963-10289518:-1
so has part: feature:10289370-10289518:-1:exon
so has part: feature:10279294-10279430:-1:exon
so has part: feature:10257037-10257158:-1:exon
so has part: feature:10248077-10248194:-1:exon
so has part: feature:10231926-10232177:-1:exon
so has part: feature:10226963-10227453:-1:exon

XP_028724022.1
type: Protein
SIO_000068: ncbiprotein

position:10289518:-1
position: 10289518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10289370-10289518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10279294-10279430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10257037-10257158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10248077-10248194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10231926-10232177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10226963-10227453:-1:exon

Cdh18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cdh18
product: cadherin 18, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_028868188.2
SIO_010081: Cdh18
subclass of: SO_0000673
so part of: Cdh18
location: complement(join(10227372..10227453,10231926..10232068,10248077..10248194,10257037..10257158,10279294..10279430,10289370..10289623,10309254..10309441,10318208..10318375,10413890..10414009,10437853..10438147,10504999..10505477,10640936..10641737))
location: region:10227372-10641737:-1
so has part: feature:10640936-10641737:-1:exon
so has part: feature:10504999-10505477:-1:exon
so has part: feature:10437853-10438147:-1:exon
so has part: feature:10413890-10414009:-1:exon
so has part: feature:10318208-10318375:-1:exon
so has part: feature:10309254-10309441:-1:exon
so has part: feature:10289370-10289623:-1:exon
so has part: feature:10279294-10279430:-1:exon
so has part: feature:10257037-10257158:-1:exon
so has part: feature:10248077-10248194:-1:exon
so has part: feature:10231926-10232068:-1:exon
so has part: feature:10227372-10227453:-1:exon

position:10227372:-1
position: 10227372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10641737:-1
position: 10641737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10640936-10641737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10504999-10505477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10437853-10438147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10413890-10414009:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10318208-10318375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10309254-10309441:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10289370-10289623:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10279294-10279430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10257037-10257158:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10248077-10248194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10231926-10232068:-1:exon

position:10232068:-1
position: 10232068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10227372-10227453:-1:exon

Cdh18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cdh18
product: cadherin 18, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_028868187.2
SIO_010081: Cdh18
subclass of: SO_0000673
so part of: Cdh18
location: complement(join(10227372..10227453,10231926..10232071,10248077..10248194,10257037..10257158,10279294..10279430,10289370..10289623,10309254..10309441,10318208..10318375,10413890..10414009,10437853..10438147,10504999..10505477,10640936..10641737))
location: region:10227372-10641737:-1
so has part: feature:10640936-10641737:-1:exon
so has part: feature:10504999-10505477:-1:exon
so has part: feature:10437853-10438147:-1:exon
so has part: feature:10413890-10414009:-1:exon
so has part: feature:10318208-10318375:-1:exon
so has part: feature:10309254-10309441:-1:exon
so has part: feature:10289370-10289623:-1:exon
so has part: feature:10279294-10279430:-1:exon
so has part: feature:10257037-10257158:-1:exon
so has part: feature:10248077-10248194:-1:exon
so has part: feature:10231926-10232071:-1:exon
so has part: feature:10227372-10227453:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10640936-10641737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10504999-10505477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10437853-10438147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10413890-10414009:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10318208-10318375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10309254-10309441:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10289370-10289623:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10279294-10279430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10257037-10257158:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10248077-10248194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10231926-10232071:-1:exon

position:10232071:-1
position: 10232071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10227372-10227453:-1:exon

Cdh18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cdh18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-18 isoform X3
translation: MRITSTSCICPVLVCLCFVQRCYGTAHHSSIKVTRNQTKHTEGETEVHHRPKRGWVWNQFFVLEEHMGPDPQYVGKLHSNSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYVLHAQAIDRRTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVDPKTGVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSITNGDGIGIFSISTDKDTREGILSLKKPLNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIVGDVNEPPLFSMPSYVMDVYENAKIGTIVGTVLAQDPDSANSLVRYFINHSAEEDRFFNIDANTGTIKTSKVLDREETPWYNITVMASENDNPDLLSHVSVGIRVLDVNDNPPELAREYDIVVCENSKPGQVIHTITATDKDDFANGPRFNFFLDERLPVNPNFTLKDNEAAAPSQSGFVPAREMGVCGPAMQKPSCPPRA
SIO_010081: Cdh18
subclass of: SO_0000673
so part of: Cdh18
location: complement(join(10231974..10232068,10248077..10248194,10257037..10257158,10279294..10279430,10289370..10289623,10309254..10309441,10318208..10318375,10413890..10414009,10437853..10438147,10504999..10505226))
location: region:10231974-10505226:-1
so has part: feature:10504999-10505226:-1:exon
so has part: feature:10437853-10438147:-1:exon
so has part: feature:10413890-10414009:-1:exon
so has part: feature:10318208-10318375:-1:exon
so has part: feature:10309254-10309441:-1:exon
so has part: feature:10289370-10289623:-1:exon
so has part: feature:10279294-10279430:-1:exon
so has part: feature:10257037-10257158:-1:exon
so has part: feature:10248077-10248194:-1:exon
so has part: feature:10231974-10232068:-1:exon

XP_028724021.1
type: Protein
SIO_000068: ncbiprotein

position:10231974:-1
position: 10231974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10504999-10505226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10437853-10438147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10413890-10414009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10318208-10318375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10309254-10309441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10289370-10289623:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10279294-10279430:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10257037-10257158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10248077-10248194:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10231974-10232068:-1:exon

Cdh18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: Cdh18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-18 isoform X2
translation: MRITSTSCICPVLVCLCFVQRCYGTAHHSSIKVTRNQTKHTEGETEVHHRPKRGWVWNQFFVLEEHMGPDPQYVGKLHSNSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYVLHAQAIDRRTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVDPKTGVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSITNGDGIGIFSISTDKDTREGILSLKKPLNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIVGDVNEPPLFSMPSYVMDVYENAKIGTIVGTVLAQDPDSANSLVRYFINHSAEEDRFFNIDANTGTIKTSKVLDREETPWYNITVMASENDNPDLLSHVSVGIRVLDVNDNPPELAREYDIVVCENSKPGQVIHTITATDKDDFANGPRFNFFLDERLPVNPNFTLKDNEAAAAPSQSGFVPAREMGVCGPAMQKPSCPPRA
SIO_010081: Cdh18
subclass of: SO_0000673
so part of: Cdh18
location: complement(join(10231974..10232071,10248077..10248194,10257037..10257158,10279294..10279430,10289370..10289623,10309254..10309441,10318208..10318375,10413890..10414009,10437853..10438147,10504999..10505226))
location: region:10231974-10505226:-1
so has part: feature:10504999-10505226:-1:exon
so has part: feature:10437853-10438147:-1:exon
so has part: feature:10413890-10414009:-1:exon
so has part: feature:10318208-10318375:-1:exon
so has part: feature:10309254-10309441:-1:exon
so has part: feature:10289370-10289623:-1:exon
so has part: feature:10279294-10279430:-1:exon
so has part: feature:10257037-10257158:-1:exon
so has part: feature:10248077-10248194:-1:exon
so has part: feature:10231974-10232071:-1:exon

XP_028724020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10504999-10505226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10437853-10438147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10413890-10414009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10318208-10318375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10309254-10309441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10289370-10289623:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10279294-10279430:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10257037-10257158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10248077-10248194:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10231974-10232071:-1:exon

LOC114692464
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114692464
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(10952143..10952302)
location: region:10952143-10952302:-1
so has part: feature:10952143-10952302:-1:exon
subclass of: SO_0000623

114692464
type: Gene
SIO_000068: ncbigene

position:10952143:-1
position: 10952143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10952302:-1
position: 10952302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10952143-10952302:-1:exon

LOC114692464
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 10041
nc RNA class: snRNA
gene: LOC114692464
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003734420.1
SIO_010081: LOC114692464
subclass of: SO_0000673
so part of: LOC114692464
location: complement(10952143..10952302)
location: region:10952143-10952302:-1
so has part: feature:10952143-10952302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10952143-10952302:-1:exon

LOC114692456
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: LOC114692456
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11092592..11093467
location: region:11092592-11093467:1
so has part: feature:11092592-11093467:1:exon
subclass of: SO_0000010

114692456
type: Gene
SIO_000068: ncbigene

position:11092592:1
position: 11092592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11093467:1
position: 11093467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11092592-11093467:1:exon

LOC114692456
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: LOC114692456
product: granzyme-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_028868190.2
SIO_010081: LOC114692456
subclass of: SO_0000673
so part of: LOC114692456
location: 11092592..11093467
location: region:11092592-11093467:1
so has part: feature:11092592-11093467:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11092592-11093467:1:exon

LOC114692456
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 10041
gene: LOC114692456
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granzyme-like protein 2
translation: MFLLLLLLVAVLPVSTEGGEIFWGTESKPHSRPYMAFINFYDSQSERKRCGGFLVREDIVMTAAHCNGRNITVTLGAHNIKKQENTQLISVHKAIPHKSYNSKTRVNDIMLLKLKHKAKLNGVVKTIALPKSQDWVKPGQVCTVAGWGTLANCSLSNTLQEVNLEVQKSQTCQAMSKNYKDSIQICVGNPKEKKATAGGDSGGPFVCHNVAQGIVSYHYCTGKPPRVFTRISSFLAWIQEKMKLLQQP
SIO_010081: LOC114692456
subclass of: SO_0000673
so part of: LOC114692456
location: 11092642..11093388
location: region:11092642-11093388:1
so has part: feature:11092642-11093388:1:exon

XP_028724023.1
type: Protein
SIO_000068: ncbiprotein

position:11092642:1
position: 11092642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11093388:1
position: 11093388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11092642-11093388:1:exon

Cdh12
type: Gene
subclass of: SO_0000704
RO_0002162: 10041
gene: Cdh12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11948819..12952146)
location: region:11948819-12952146:-1
so has part: feature:11948819-12952146:-1:exon
subclass of: SO_0000010

114692457
type: Gene
SIO_000068: ncbigene

position:11948819:-1
position: 11948819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12952146:-1
position: 12952146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11948819-12952146:-1:exon

Cdh12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cdh12
product: cadherin 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_028868191.2
SIO_010081: Cdh12
subclass of: SO_0000673
so part of: Cdh12
location: complement(join(11948819..11950174,11953134..11953385,11957669..11957786,11961206..11961327,11970225..11970361,11993018..11993271,12007011..12007198,12026745..12026912,12037944..12038063,12140673..12140967,12239859..12240271,12356444..12356589,12610639..12610733,12951830..12952146))
location: region:11948819-12952146:-1
so has part: feature:12951830-12952146:-1:exon
so has part: feature:12610639-12610733:-1:exon
so has part: feature:12356444-12356589:-1:exon
so has part: feature:12239859-12240271:-1:exon
so has part: feature:12140673-12140967:-1:exon
so has part: feature:12037944-12038063:-1:exon
so has part: feature:12026745-12026912:-1:exon
so has part: feature:12007011-12007198:-1:exon
so has part: feature:11993018-11993271:-1:exon
so has part: feature:11970225-11970361:-1:exon
so has part: feature:11961206-11961327:-1:exon
so has part: feature:11957669-11957786:-1:exon
so has part: feature:11953134-11953385:-1:exon
so has part: feature:11948819-11950174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12951830-12952146:-1:exon

position:12951830:-1
position: 12951830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12610639-12610733:-1:exon

position:12610639:-1
position: 12610639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12610733:-1
position: 12610733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12356444-12356589:-1:exon

position:12356444:-1
position: 12356444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12356589:-1
position: 12356589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12239859-12240271:-1:exon

position:12239859:-1
position: 12239859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12240271:-1
position: 12240271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12140673-12140967:-1:exon

position:12140673:-1
position: 12140673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12140967:-1
position: 12140967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12037944-12038063:-1:exon

position:12037944:-1
position: 12037944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12038063:-1
position: 12038063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12026745-12026912:-1:exon

position:12026745:-1
position: 12026745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12026912:-1
position: 12026912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12007011-12007198:-1:exon

position:12007011:-1
position: 12007011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12007198:-1
position: 12007198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11993018-11993271:-1:exon

position:11993018:-1
position: 11993018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11993271:-1
position: 11993271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11970225-11970361:-1:exon

position:11970225:-1
position: 11970225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11970361:-1
position: 11970361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11961206-11961327:-1:exon

position:11961206:-1
position: 11961206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11961327:-1
position: 11961327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11957669-11957786:-1:exon

position:11957669:-1
position: 11957669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11957786:-1
position: 11957786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11953134-11953385:-1:exon

position:11953134:-1
position: 11953134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11953385:-1
position: 11953385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:11948819-11950174:-1:exon

position:11950174:-1
position: 11950174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cdh12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cdh12
product: cadherin 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_028868192.2
SIO_010081: Cdh12
subclass of: SO_0000673
so part of: Cdh12
location: complement(join(11948819..11950174,11953134..11953385,11957669..11957786,11961206..11961327,11970225..11970361,11993018..11993271,12007011..12007198,12026745..12026912,12037944..12038063,12140673..12140967,12239859..12240271,12356444..12356589,12519142..12519261,12610639..12610733,12951830..12952146))
location: region:11948819-12952146:-1
so has part: feature:12951830-12952146:-1:exon
so has part: feature:12610639-12610733:-1:exon
so has part: feature:12519142-12519261:-1:exon
so has part: feature:12356444-12356589:-1:exon
so has part: feature:12239859-12240271:-1:exon
so has part: feature:12140673-12140967:-1:exon
so has part: feature:12037944-12038063:-1:exon
so has part: feature:12026745-12026912:-1:exon
so has part: feature:12007011-12007198:-1:exon
so has part: feature:11993018-11993271:-1:exon
so has part: feature:11970225-11970361:-1:exon
so has part: feature:11961206-11961327:-1:exon
so has part: feature:11957669-11957786:-1:exon
so has part: feature:11953134-11953385:-1:exon
so has part: feature:11948819-11950174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12951830-12952146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12610639-12610733:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12519142-12519261:-1:exon

position:12519142:-1
position: 12519142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12519261:-1
position: 12519261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12356444-12356589:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12239859-12240271:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12140673-12140967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12037944-12038063:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12026745-12026912:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12007011-12007198:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11993018-11993271:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11970225-11970361:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11961206-11961327:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11957669-11957786:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11953134-11953385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11948819-11950174:-1:exon

Cdh12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 10041
gene: Cdh12
product: cadherin 12, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_028868193.2
SIO_010081: Cdh12
subclass of: SO_0000673
so part of: Cdh12
location: complement(join(11948819..11950174,11953134..11953385,11957669..11957786,11961206..11961327,11970225..11970361,11993018..11993271,12007011..12007198,12026745..12026912,12037944..12038063,12140673..12140967,12239859..12240271,12356444..12356589,12610639..12610733,12612088..12612234))
location: region:11948819-12612234:-1
so has part: feature:12612088-12612234:-1:exon
so has part: feature:12610639-12610733:-1:exon
so has part: feature:12356444-12356589:-1:exon
so has part: feature:12239859-12240271:-1:exon
so has part: feature:12140673-12140967:-1:exon
so has part: feature:12037944-12038063:-1:exon
so has part: feature:12026745-12026912:-1:exon
so has part: feature:12007011-12007198:-1:exon
so has part: feature:11993018-11993271:-1:exon
so has part: feature:11970225-11970361:-1:exon
so has part: feature:11961206-11961327:-1:exon
so has part: feature:11957669-11957786:-1:exon
so has part: feature:11953134-11953385:-1:exon
so has part: feature:11948819-11950174:-1:exon

position:12612234:-1
position: 12612234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12612088-12612234:-1:exon

position:12612088:-1
position: 12612088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12610639-12610733:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12356444-12356589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12239859-12240271:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12140673-12140967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12037944-12038063:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12026745-12026912:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12007011-12007198:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11993018-11993271:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11970225-11970361:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11961206-11961327:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11957669-11957786:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11953134-11953385:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11948819-11950174:-1:exon