Kluyveromyces marxianus DMKU3-1042 DNA, complete genome, chromosome 3.
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Kluyveromyces.
Genetic basis of the highly efficient yeast Kluyveromyces marxianus: complete genome sequence and transcriptome analyses
DOI:10.1186/s13068-015-0227-x Publication Status: Online-Only
Submitted (23-OCT-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (21-JUN-2011) Contact:Mamoru Yamada Yamaguchi University; 1677-1 Yoshida, Yamaguchi, Yamaguchi 753-8515, Japan URL :http://ds22.cc.yamaguchi-u.ac.jp/~jo-sei08/index.html
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to AP012215.\nDOGAN ; Database of Genomes Analyzed at NITE\nThe database contains genome sequence data, physical maps and the\ngenomic and proteomic data of the microorganisms analyzed.\nURL:http://www.bio.nite.go.jp/dogan/Top\n\nPlease visit our web site.\nURL:http://www.bio.nite.go.jp/\n##Genome-Assembly-Data-START##\nAssembly Method :: SPS phrap v. 0.990329\nAssembly Name :: Kmar_1.0\nGenome Coverage :: 8.4x\nSequencing Technology :: Sanger ABI3730\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
transposon Ty2-F/Ty2-GR2 Gag-Pol polyprotein
conserved hypothetical transmembrane protein
methylene-fatty-acyl-phospholipid synthase
UDP-N-acetylenolpyruvoylglucosamine reductase
chromosome transmission fidelity protein 18
basic leucine zipper domain-containing protein
cl02576, the Pfam entry includes the basic region and the leucine zipper region.
suppressor of HU sensitivity involved in recombination
class E vacuolar protein-sorting machinery protein HSE1
vacuolar protein sorting-associated protein 1
chromatin structure-remodeling complex subunit RSC2
vacuolar protein sorting-associated protein 38
centromere DNA-binding protein complex CBF3 subunit
vacuolar ATPase assembly integral membrane protein VPH2
putative dehydrodolichyl diphosphate synthetase
mitochondrial oxaloacetate transport protein
signal recognition particle subunit SRP21
RNA polymerase I-specific transcription initiation factor RRN3
putative fatty aldehyde dehydrogenase HFD1
mediator of RNA polymerase II transcription subunit 11
mitochondrial inner membrane i-AAA protease supercomplex subunit MGR3
guanine nucleotide-binding protein subunit beta-like protein
succinate dehydrogenase [ubiquinone] cytochrome b subunit
tRNA (cytosine-5-)-methyltransferase NCL1
serine/threonine-protein phosphatase PP1-2
isocitrate dehydrogenase [NADP] cytoplasmic
serine/threonine-protein kinase BCK1/SLK1/SSP31
outward-rectifier potassium channel TOK1
myosin tail region-interacting protein MTI1
beta-glucan synthesis-associated protein KRE11
mediator of RNA polymerase II transcription subunit 2
phosphatidylserine decarboxylase proenzyme 2
ribonucleoside-diphosphate reductase small chain 1
RNA polymerase I-specific transcription initiation factor RRN7
mitochondrial import inner membrane translocase subunit TIM13
transcription initiation factor IIF subunit alpha
maintenance of mitochondrial morphology protein 1
dolichyl-phosphate-mannose--protein mannosyltransferase 2
glucose-repressible alcohol dehydrogenase transcriptional effector
mitochondrial import receptor subunit TOM6
sphingoid long-chain base transporter RSB1
glycerol-3-phosphate O-acyltransferase 2
transport protein particle 22 kDa subunit
uroporphyrinogen-III C-methyltransferase
altered inheritance rate of mitochondria protein 29
g1-specific transcription factors activator MSA1
dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1
vacuolar protein sorting-associated protein 5
chromatin-remodeling complex subunit IES6
DNA damage-responsive transcriptional repressor RPH1
probable phospholipid-transporting ATPase DNF1
GPI ethanolamine phosphate transferase 3
glycolipid 2-alpha-mannosyltransferase domain-containing protein
GAL4-like Zn2Cys6 binuclear cluster DNA-binding domain; found in transcription regulators like GAL4
phosphatidylinositol-3-phosphate-binding protein 2
glycerol-3-phosphate O-acyltransferase 1
serine/threonine-protein phosphatase PPQ
spindle pole body-associated protein CIK1
auxilin-like clathrin uncoating factor SWA2
antagonist of mitotic exit network protein 1
mannosyl phosphorylinositol ceramide synthase SUR1
calcium/calmodulin-dependent protein kinase II
vacuolar protein sorting-associated protein 41
conserved oligomeric Golgi complex subunit 3
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3
nuclear localization sequence-binding protein
actin cytoskeleton-regulatory complex protein END3
calcium-binding mitochondrial carrier SAL1
DNA polymerase zeta processivity subunit
eukaryotic peptide chain release factor subunit 1
2-deoxyglucose-6-phosphate phosphatase 2
tRNA-specific adenosine deaminase subunit TAD2
diacylglycerol pyrophosphate phosphatase 1
mediator of RNA polymerase II transcription subunit
delta-1-pyrroline-5-carboxylate dehydrogenase
mitochondrial homologous recombination protein 1
glycosylphosphatidylinositol anchor biosynthesis protein 11
mediator of RNA polymerase II transcription subunit 6
potential protein lysine methyltransferase SET6
translation machinery-associated protein 16
N-terminal acetyltransferase A complex subunit NAT5
phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit
translation initiation factor eIF-2B subunit gamma
U3 small nucleolar RNA-associated protein 7
cl00411, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
mitochondrial inner membrane protease ATP23
TPR repeat-containing protein associated with Hsp90
postreplication repair E3 ubiquitin-protein ligase RAD18
putative guanine nucleotide-exchange factor SED4
cl00068, GAL4-like Zn2Cys6 binuclear cluster DNA-binding domain
pre-mRNA-splicing ATP-dependent RNA helicase PRP28
H/ACA ribonucleoprotein complex subunit 2
U1 small nuclear ribonucleoprotein component
U1 small nuclear ribonucleoprotein component PRP42
4,5-DOPA dioxygenase extradiol-like protein
RNA polymerase II transcription factor B subunit 3
probable dolichyl-phosphate-mannose--protein mannosyltransferase 7
mediator of RNA polymerase II transcription subunit 21
ribosome-associated complex subunit SSZ1
RNA polymerase II transcription factor B subunit 1
eukaryotic translation initiation factor 3 subunit A
S-adenosylmethionine decarboxylase proenzyme
DNA-(apurinic or apyrimidinic site) lyase 1
meiosis induction protein kinase IME2/SME1
D-arabinose dehydrogenase [NAD(P)+] heavy chain
carbon catabolite-derepressing protein kinase
eukaryotic translation initiation factor 3 subunit B
peroxisome proliferation transcriptional regulator
DNA polymerase alpha subunit B domain containing protein
DNA repair and recombination protein RAD54
chromatin structure-remodeling complex subunit RSC4
eukaryotic translation initiation factor 2A
calcium/calmodulin-dependent protein kinase type 1D
cd00067, GAL4-like Zn2Cys6 binuclear cluster DNA-binding domain
mitochondrial 37S ribosomal protein PET123
transport protein particle complex II subunit
phosphoribosylglycinamide formyltransferase
protein-S-isoprenylcysteine O-methyltransferase
vacuolar protein sorting-associated protein 71
N-terminal acetyltransferase C complex subunit MAK10
Acyl CoA binding protein (ACBP) [cl00221]
This family consists of a number of glycoprotein gp2 sequences from equine herpesviruses. [pfam05955]
ABC transporter ATP-binding protein ARB1
vacuolar import and degradation protein 30
ER-localized J domain-containing protein 5
bifunctional purine biosynthetic protein ADE5
mitochondrial translation optimization protein 1
osmosensing histidine protein kinase SLN1
Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [COG1597]
polarized growth chromatin-associated controller 1
serine/threonine-protein phosphatase 2A activator 1
sugar utilization regulatory protein IMP2
probable pyridoxine biosynthesis protein SNZ3
probable glutamine amidotransferase SNO3
structural maintenance of chromosomes protein 3