Indicator indicator isolate 239-I01 chromosome W, UM_Iind_1.1, whole genome shotgun sequence.
type: Entry
definition: Indicator indicator isolate 239-I01 chromosome W, UM_Iind_1.1, whole genome shotgun sequence.
sequence version: NC_072052.1
sequence date: 2023-03-20
sequence: sequence
division: CON
label: NC_072052.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA944656
dblink: SAMN31686289
keyword: WGS
keyword: RefSeq
source: Indicator indicator
organism: Indicator indicator
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Piciformes; Indicatoridae; Indicator.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM051123.1.\nAssembly name: UM_Iind_1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Brood Parasitic Bird Genomes\nConsortium on 2023/01/13. The original whole-genome shotgun project\nhas the accession JAQHUL000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Brood Parasitic Bird Genomes Consortium\nAssembly Date :: JUN-2022\nAssembly Method :: Flye v. 2.8.1-b1676\nAssembly Name :: UM_Iind_1.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 254.0x\nSequencing Technology :: PacBio CLR\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_027791375.1-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/15/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 935790
topology: linear
so has quality: SO_0000987
location: 1..935790
location: region:1-935790:1
RO_0002162: 1002788

NC_072052
type: RefSeq
SIO_000068: refseq

PRJNA944656
type: BioProject
SIO_000068: bioproject

SAMN31686289
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935790:1
position: 935790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-935790:1:source
so part of: sequence
organism: Indicator indicator
mol type: genomic DNA
isolate: 239-I01
chromosome: W
sex: female
tissue type: muscle
dev stage: adult
country: Zambia

1002788
type: Taxonomy
SIO_000068: taxonomy

LOC128979122
type: Gene
subclass of: SO_0000704
RO_0002162: 1002788
gene: LOC128979122
note: NADH-ubiquinone oxidoreductase chain 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2390..4334)
location: region:2390-4334:-1
so has part: feature:2390-4334:-1:exon

128979122
type: Gene
SIO_000068: ncbigene

position:2390:-1
position: 2390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4334:-1
position: 4334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2390-4334:-1:exon

LOC128979122
type: Exon
subclass of: SO_0000147
RO_0002162: 1002788
gene: LOC128979122
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 495 Proteins
pseudo: true
SIO_010081: LOC128979122
subclass of: SO_0000673
so part of: LOC128979122
location: complement(2390..3119)
location: region:2390-3119:-1
so has part: feature:2390-3119:-1:exon

position:3119:-1
position: 3119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2390-3119:-1:exon

LOC128979122
type: Exon
subclass of: SO_0000147
RO_0002162: 1002788
gene: LOC128979122
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 495 Proteins
pseudo: true
SIO_010081: LOC128979122
subclass of: SO_0000673
so part of: LOC128979122
location: complement(3222..3356)
location: region:3222-3356:-1
so has part: feature:3222-3356:-1:exon

position:3222:-1
position: 3222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3356:-1
position: 3356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3222-3356:-1:exon

LOC128979122
type: Exon
subclass of: SO_0000147
RO_0002162: 1002788
gene: LOC128979122
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 495 Proteins
pseudo: true
SIO_010081: LOC128979122
subclass of: SO_0000673
so part of: LOC128979122
location: complement(4253..4334)
location: region:4253-4334:-1
so has part: feature:4253-4334:-1:exon

position:4253:-1
position: 4253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4253-4334:-1:exon

LOC128979115
type: Gene
subclass of: SO_0000704
RO_0002162: 1002788
gene: LOC128979115
note: NADH-ubiquinone oxidoreductase chain 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(35595..36323)
location: region:35595-36323:-1
so has part: feature:35595-36323:-1:exon

128979115
type: Gene
SIO_000068: ncbigene

position:35595:-1
position: 35595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36323:-1
position: 36323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35595-36323:-1:exon

LOC128979115
type: Exon
subclass of: SO_0000147
RO_0002162: 1002788
gene: LOC128979115
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 496 Proteins
pseudo: true
SIO_010081: LOC128979115
subclass of: SO_0000673
so part of: LOC128979115
location: complement(35595..36323)
location: region:35595-36323:-1
so has part: feature:35595-36323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35595-36323:-1:exon

LOC128979116
type: Gene
subclass of: SO_0000704
RO_0002162: 1002788
gene: LOC128979116
note: ras GTPase-activating protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 190716..393863
location: region:190716-393863:1
so has part: feature:190716-393863:1:exon
subclass of: SO_0000010

128979116
type: Gene
SIO_000068: ncbigene

position:190716:1
position: 190716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393863:1
position: 393863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190716-393863:1:exon

LOC128979116
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1002788
gene: LOC128979116
product: ras GTPase-activating protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_054397213.1
SIO_010081: LOC128979116
subclass of: SO_0000673
so part of: LOC128979116
location: join(190716..190726,191546..192103,216880..217029,224851..224986,226345..226415,252149..252266,253298..253329,255060..255112,255718..255868,270327..270405,272708..272828,275457..275613,287959..288046,305840..305917,309884..310041,310330..310406,336385..336557,336706..336865,337019..337161,338085..338200,348743..348829,380995..381064,381482..381592,390092..390169,391483..391617,393780..393863)
location: region:190716-393863:1
so has part: feature:190716-190726:1:exon
so has part: feature:191546-192103:1:exon
so has part: feature:216880-217029:1:exon
so has part: feature:224851-224986:1:exon
so has part: feature:226345-226415:1:exon
so has part: feature:252149-252266:1:exon
so has part: feature:253298-253329:1:exon
so has part: feature:255060-255112:1:exon
so has part: feature:255718-255868:1:exon
so has part: feature:270327-270405:1:exon
so has part: feature:272708-272828:1:exon
so has part: feature:275457-275613:1:exon
so has part: feature:287959-288046:1:exon
so has part: feature:305840-305917:1:exon
so has part: feature:309884-310041:1:exon
so has part: feature:310330-310406:1:exon
so has part: feature:336385-336557:1:exon
so has part: feature:336706-336865:1:exon
so has part: feature:337019-337161:1:exon
so has part: feature:338085-338200:1:exon
so has part: feature:348743-348829:1:exon
so has part: feature:380995-381064:1:exon
so has part: feature:381482-381592:1:exon
so has part: feature:390092-390169:1:exon
so has part: feature:391483-391617:1:exon
so has part: feature:393780-393863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190716-190726:1:exon

position:190726:1
position: 190726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:191546-192103:1:exon

position:191546:1
position: 191546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192103:1
position: 192103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:216880-217029:1:exon

position:216880:1
position: 216880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217029:1
position: 217029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:224851-224986:1:exon

position:224851:1
position: 224851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224986:1
position: 224986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:226345-226415:1:exon

position:226345:1
position: 226345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226415:1
position: 226415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:252149-252266:1:exon

position:252149:1
position: 252149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252266:1
position: 252266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:253298-253329:1:exon

position:253298:1
position: 253298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253329:1
position: 253329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:255060-255112:1:exon

position:255060:1
position: 255060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255112:1
position: 255112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:255718-255868:1:exon

position:255718:1
position: 255718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255868:1
position: 255868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:270327-270405:1:exon

position:270327:1
position: 270327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270405:1
position: 270405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:272708-272828:1:exon

position:272708:1
position: 272708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272828:1
position: 272828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:275457-275613:1:exon

position:275457:1
position: 275457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275613:1
position: 275613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:287959-288046:1:exon

position:287959:1
position: 287959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288046:1
position: 288046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:305840-305917:1:exon

position:305840:1
position: 305840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305917:1
position: 305917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:309884-310041:1:exon

position:309884:1
position: 309884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310041:1
position: 310041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:310330-310406:1:exon

position:310330:1
position: 310330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310406:1
position: 310406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:336385-336557:1:exon

position:336385:1
position: 336385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336557:1
position: 336557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:336706-336865:1:exon

position:336706:1
position: 336706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336865:1
position: 336865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:337019-337161:1:exon

position:337019:1
position: 337019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337161:1
position: 337161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:338085-338200:1:exon

position:338085:1
position: 338085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338200:1
position: 338200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:348743-348829:1:exon

position:348743:1
position: 348743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348829:1
position: 348829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:380995-381064:1:exon

position:380995:1
position: 380995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381064:1
position: 381064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:381482-381592:1:exon

position:381482:1
position: 381482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381592:1
position: 381592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:390092-390169:1:exon

position:390092:1
position: 390092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390169:1
position: 390169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:391483-391617:1:exon

position:391483:1
position: 391483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391617:1
position: 391617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:393780-393863:1:exon

position:393780:1
position: 393780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128979116
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1002788
gene: LOC128979116
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating protein 1-like
translation: MVAGEVFYSSRLYSLQAGAGEVVATSPLGGGGRGGRLNIMAAEESGLVTSAGMVGAVAGADSEHYPTFCRDKELGPQGLFLVGSGGDGSGAGGPALCSALGLLGLDSGPTSLLSGGSSTGTATGQAQGLEVSGRVLPPPKPSTVVFPSLPLQPPSLVGELGTMEEGDSLDGPEYEEEEVAIPLNAPHTNQWYHGKLDRAIAEERLRQAGKPGSYLIRESDRRPGSFVLSFLSKTNVNHFRIIAMCGDYYIGGRRFASLSDLIGYYSHVSCLLKGEKLFFPVAPPEPVEDRRRVRAILPYTKVPETDEISFLKGDMFIVHNELEDGWMWVSNLRTDEQGLVVEDLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTSENIQRFKICPASSNQFMMGGRYYNSIAEIIEHYRKEQIVEGYYLKDPVPMQHQEQVVNDTVDGKKIYNTIRRKTKDSFYKNIVKKGYLLKKSKGKRWKNLYFILEGNDVQLIYFESEKRATKPKGLIDLSVCSVYGVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPEQAQEWMKALQMFCSLRKNSPGTSNKRLRQVSSLILHVEEAHTLPVKHFTNPYCNIYLNSVQVAKTHIKEGQNPVWSEEFVFDDLSSDINRFEISLSNKTKKSKDPDILFMRCQLSRLHKGHATDEWFQLSSHIPLKGIEPGSLRVRARYSMEKIMPEEEYSEFKELILQKEMHVVYALSHVCGQDRTLLAGILLKIFLHERLESLLLRTLNDREINMEDEATTLFRATTLASTLMEQYMKTTATHFVHHALKDSILKIMESKQSCELNPSKLEKNEDVNTNLAHLLSILSELVEKIFMAAEILPPTLRYIYGCLQKSVQNKWPANTTMRTRVVRAATQGTLRISCLNKVKFALRKSKALNAFILYLKFCGVKRFPNIQGHPSSSSPSPVSLKELEPYMEGVNPFIKNNKHRMIMFLDELGNVPELPDTTEHSRTDLSRYLAALHEMCVAHSDELRTLSNERGVMQHVLKKLLAITELLQQKQNQYSVSNNIS
SIO_010081: LOC128979116
subclass of: SO_0000673
so part of: LOC128979116
location: join(190716..190726,191546..192103,216880..217029,224851..224986,226345..226415,252149..252266,253298..253329,255060..255112,255718..255868,270327..270405,272708..272828,275457..275613,287959..288046,305840..305917,309884..310041,310330..310406,336385..336557,336706..336865,337019..337161,338085..338200,348743..348829,380995..381064,381482..381592,390092..390169,391483..391617,393780..393863)
location: region:190716-393863:1
so has part: feature:190716-190726:1:exon
so has part: feature:191546-192103:1:exon
so has part: feature:216880-217029:1:exon
so has part: feature:224851-224986:1:exon
so has part: feature:226345-226415:1:exon
so has part: feature:252149-252266:1:exon
so has part: feature:253298-253329:1:exon
so has part: feature:255060-255112:1:exon
so has part: feature:255718-255868:1:exon
so has part: feature:270327-270405:1:exon
so has part: feature:272708-272828:1:exon
so has part: feature:275457-275613:1:exon
so has part: feature:287959-288046:1:exon
so has part: feature:305840-305917:1:exon
so has part: feature:309884-310041:1:exon
so has part: feature:310330-310406:1:exon
so has part: feature:336385-336557:1:exon
so has part: feature:336706-336865:1:exon
so has part: feature:337019-337161:1:exon
so has part: feature:338085-338200:1:exon
so has part: feature:348743-348829:1:exon
so has part: feature:380995-381064:1:exon
so has part: feature:381482-381592:1:exon
so has part: feature:390092-390169:1:exon
so has part: feature:391483-391617:1:exon
so has part: feature:393780-393863:1:exon

XP_054253188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190716-190726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191546-192103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216880-217029:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:224851-224986:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226345-226415:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:252149-252266:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253298-253329:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:255060-255112:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255718-255868:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:270327-270405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272708-272828:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:275457-275613:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287959-288046:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:305840-305917:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:309884-310041:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:310330-310406:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:336385-336557:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:336706-336865:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:337019-337161:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:338085-338200:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:348743-348829:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:380995-381064:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:381482-381592:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:390092-390169:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:391483-391617:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:393780-393863:1:exon

LOC128979119
type: Gene
subclass of: SO_0000704
RO_0002162: 1002788
gene: LOC128979119
note: mesoderm induction early response protein 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 457357..482602
location: region:457357-482602:1
so has part: feature:457357-482602:1:exon
subclass of: SO_0000010

128979119
type: Gene
SIO_000068: ncbigene

position:457357:1
position: 457357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482602:1
position: 482602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457357-482602:1:exon

LOC128979119
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1002788
gene: LOC128979119
product: mesoderm induction early response protein 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
transcript id: XM_054397215.1
SIO_010081: LOC128979119
subclass of: SO_0000673
so part of: LOC128979119
location: join(457357..457402,459613..459758,466969..467103,468516..468636,470738..470823,471024..471096,473378..473529,473951..474032,478532..478626,481577..481704,481881..482026,482148..482602)
location: region:457357-482602:1
so has part: feature:457357-457402:1:exon
so has part: feature:459613-459758:1:exon
so has part: feature:466969-467103:1:exon
so has part: feature:468516-468636:1:exon
so has part: feature:470738-470823:1:exon
so has part: feature:471024-471096:1:exon
so has part: feature:473378-473529:1:exon
so has part: feature:473951-474032:1:exon
so has part: feature:478532-478626:1:exon
so has part: feature:481577-481704:1:exon
so has part: feature:481881-482026:1:exon
so has part: feature:482148-482602:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:457357-457402:1:exon

position:457402:1
position: 457402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:459613-459758:1:exon

position:459613:1
position: 459613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459758:1
position: 459758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:466969-467103:1:exon

position:466969:1
position: 466969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467103:1
position: 467103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:468516-468636:1:exon

position:468516:1
position: 468516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468636:1
position: 468636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:470738-470823:1:exon

position:470738:1
position: 470738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470823:1
position: 470823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:471024-471096:1:exon

position:471024:1
position: 471024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471096:1
position: 471096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:473378-473529:1:exon

position:473378:1
position: 473378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473529:1
position: 473529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:473951-474032:1:exon

position:473951:1
position: 473951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474032:1
position: 474032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:478532-478626:1:exon

position:478532:1
position: 478532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478626:1
position: 478626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:481577-481704:1:exon

position:481577:1
position: 481577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481704:1
position: 481704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:481881-482026:1:exon

position:481881:1
position: 481881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482026:1
position: 482026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:482148-482602:1:exon

position:482148:1
position: 482148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128979119
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1002788
gene: LOC128979119
product: mesoderm induction early response protein 3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_054397217.1
SIO_010081: LOC128979119
subclass of: SO_0000673
so part of: LOC128979119
location: join(457378..457402,459613..459758,466969..467103,468516..468636,470738..470823,471024..471096,473378..473529,473951..474032,478535..478626,481577..481704,481881..482026,482148..482602)
location: region:457378-482602:1
so has part: feature:457378-457402:1:exon
so has part: feature:459613-459758:1:exon
so has part: feature:466969-467103:1:exon
so has part: feature:468516-468636:1:exon
so has part: feature:470738-470823:1:exon
so has part: feature:471024-471096:1:exon
so has part: feature:473378-473529:1:exon
so has part: feature:473951-474032:1:exon
so has part: feature:478535-478626:1:exon
so has part: feature:481577-481704:1:exon
so has part: feature:481881-482026:1:exon
so has part: feature:482148-482602:1:exon

position:457378:1
position: 457378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457378-457402:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459613-459758:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466969-467103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:468516-468636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470738-470823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:471024-471096:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:473378-473529:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:473951-474032:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478535-478626:1:exon

position:478535:1
position: 478535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:481577-481704:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:481881-482026:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:482148-482602:1:exon

LOC128979119
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1002788
gene: LOC128979119
product: mesoderm induction early response protein 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_054397216.1
SIO_010081: LOC128979119
subclass of: SO_0000673
so part of: LOC128979119
location: join(457483..457491,459600..459758,466969..467103,468516..468636,470738..470823,471024..471096,473378..473529,473951..474032,478532..478626,481577..481704,481881..482026,482148..482602)
location: region:457483-482602:1
so has part: feature:457483-457491:1:exon
so has part: feature:459600-459758:1:exon
so has part: feature:466969-467103:1:exon
so has part: feature:468516-468636:1:exon
so has part: feature:470738-470823:1:exon
so has part: feature:471024-471096:1:exon
so has part: feature:473378-473529:1:exon
so has part: feature:473951-474032:1:exon
so has part: feature:478532-478626:1:exon
so has part: feature:481577-481704:1:exon
so has part: feature:481881-482026:1:exon
so has part: feature:482148-482602:1:exon

position:457483:1
position: 457483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457483-457491:1:exon

position:457491:1
position: 457491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:459600-459758:1:exon

position:459600:1
position: 459600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:466969-467103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:468516-468636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470738-470823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:471024-471096:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:473378-473529:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:473951-474032:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478532-478626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:481577-481704:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:481881-482026:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:482148-482602:1:exon

LOC128979119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1002788
gene: LOC128979119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 3-like isoform X1
translation: MLVHDYDDEQTLEEEEMMEENKHFSSEIEDLEKEGNMPLEDLLAFYGYESAIPVIAGSSVDSSPSELADELPDMTLDKEEIAKDLLSGDDEETQSSADDLTPSVTSHEATDFFPRPLRSNTTCDGDKESDSEDVEADNDNSSEDLRKEIMVGSQYQAEIPPYLGRYSDNEKAYENEDHLLWKPDVISESKVKEYLFETSLRTGNKNMIGRIPGGLHTRDNEQALYELLKSSHNIKEAFERYCSNGKASQEEMTPWTEEECRSFEHALMIYGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDEAEALGGTARSSALTSNTRTETIPDQQLSILNSITANELTALTNSVATVCHSSDVNCLDDAFPPMDNLPRAPVNHVPIGTGELLNLPSNGESDCFNLFETGFYHSELNQMNMCSEETERPAKRLKMGIAVPESFMNDVSVNNLGVDFENHTHHITSAKMAVSVADFSNLSATETNGFINTHALQHSALHSE
SIO_010081: LOC128979119
subclass of: SO_0000673
so part of: LOC128979119
location: join(459660..459758,466969..467103,468516..468636,470738..470823,471024..471096,473378..473529,473951..474032,478532..478626,481577..481704,481881..482026,482148..482602)
location: region:459660-482602:1
so has part: feature:459660-459758:1:exon
so has part: feature:466969-467103:1:exon
so has part: feature:468516-468636:1:exon
so has part: feature:470738-470823:1:exon
so has part: feature:471024-471096:1:exon
so has part: feature:473378-473529:1:exon
so has part: feature:473951-474032:1:exon
so has part: feature:478532-478626:1:exon
so has part: feature:481577-481704:1:exon
so has part: feature:481881-482026:1:exon
so has part: feature:482148-482602:1:exon

XP_054253190.1
type: Protein
SIO_000068: ncbiprotein

position:459660:1
position: 459660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459660-459758:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466969-467103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468516-468636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470738-470823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471024-471096:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473378-473529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:473951-474032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478532-478626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481577-481704:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:481881-482026:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:482148-482602:1:exon

LOC128979119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1002788
gene: LOC128979119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 3-like isoform X1
translation: MLVHDYDDEQTLEEEEMMEENKHFSSEIEDLEKEGNMPLEDLLAFYGYESAIPVIAGSSVDSSPSELADELPDMTLDKEEIAKDLLSGDDEETQSSADDLTPSVTSHEATDFFPRPLRSNTTCDGDKESDSEDVEADNDNSSEDLRKEIMVGSQYQAEIPPYLGRYSDNEKAYENEDHLLWKPDVISESKVKEYLFETSLRTGNKNMIGRIPGGLHTRDNEQALYELLKSSHNIKEAFERYCSNGKASQEEMTPWTEEECRSFEHALMIYGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDEAEALGGTARSSALTSNTRTETIPDQQLSILNSITANELTALTNSVATVCHSSDVNCLDDAFPPMDNLPRAPVNHVPIGTGELLNLPSNGESDCFNLFETGFYHSELNQMNMCSEETERPAKRLKMGIAVPESFMNDVSVNNLGVDFENHTHHITSAKMAVSVADFSNLSATETNGFINTHALQHSALHSE
SIO_010081: LOC128979119
subclass of: SO_0000673
so part of: LOC128979119
location: join(459660..459758,466969..467103,468516..468636,470738..470823,471024..471096,473378..473529,473951..474032,478532..478626,481577..481704,481881..482026,482148..482602)
location: region:459660-482602:1
so has part: feature:459660-459758:1:exon
so has part: feature:466969-467103:1:exon
so has part: feature:468516-468636:1:exon
so has part: feature:470738-470823:1:exon
so has part: feature:471024-471096:1:exon
so has part: feature:473378-473529:1:exon
so has part: feature:473951-474032:1:exon
so has part: feature:478532-478626:1:exon
so has part: feature:481577-481704:1:exon
so has part: feature:481881-482026:1:exon
so has part: feature:482148-482602:1:exon

XP_054253191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459660-459758:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466969-467103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468516-468636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470738-470823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471024-471096:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473378-473529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:473951-474032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478532-478626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481577-481704:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:481881-482026:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:482148-482602:1:exon

LOC128979119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1002788
gene: LOC128979119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 3-like isoform X2
translation: MLVHDYDDEQTLEEEEMMEENKHFSSEIEDLEKEGNMPLEDLLAFYGYESAIPVIAGSSVDSSPSELADELPDMTLDKEEIAKDLLSGDDEETQSSADDLTPSVTSHEATDFFPRPLRSNTTCDGDKESDSEDVEADNDNSSEDLRKEIMVGSQYQAEIPPYLGRYSDNEKAYENEDHLLWKPDVISESKVKEYLFETSLRTGNKNMIGRIPGGLHTRDNEQALYELLKSSHNIKEAFERYCSNGKASQEMTPWTEEECRSFEHALMIYGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDEAEALGGTARSSALTSNTRTETIPDQQLSILNSITANELTALTNSVATVCHSSDVNCLDDAFPPMDNLPRAPVNHVPIGTGELLNLPSNGESDCFNLFETGFYHSELNQMNMCSEETERPAKRLKMGIAVPESFMNDVSVNNLGVDFENHTHHITSAKMAVSVADFSNLSATETNGFINTHALQHSALHSE
SIO_010081: LOC128979119
subclass of: SO_0000673
so part of: LOC128979119
location: join(459660..459758,466969..467103,468516..468636,470738..470823,471024..471096,473378..473529,473951..474032,478535..478626,481577..481704,481881..482026,482148..482602)
location: region:459660-482602:1
so has part: feature:459660-459758:1:exon
so has part: feature:466969-467103:1:exon
so has part: feature:468516-468636:1:exon
so has part: feature:470738-470823:1:exon
so has part: feature:471024-471096:1:exon
so has part: feature:473378-473529:1:exon
so has part: feature:473951-474032:1:exon
so has part: feature:478535-478626:1:exon
so has part: feature:481577-481704:1:exon
so has part: feature:481881-482026:1:exon
so has part: feature:482148-482602:1:exon

XP_054253192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459660-459758:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466969-467103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468516-468636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470738-470823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471024-471096:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473378-473529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:473951-474032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478535-478626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481577-481704:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:481881-482026:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:482148-482602:1:exon

TRNAI-GAU
type: Gene
subclass of: SO_0000704
RO_0002162: 1002788
gene: TRNAI-GAU
note: transfer RNA isoleucine (anticodon GAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 508374..508444
location: region:508374-508444:1
so has part: feature:508374-508444:1:exon
subclass of: SO_0000663

128979123
type: Gene
SIO_000068: ncbigene

position:508374:1
position: 508374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508444:1
position: 508444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508374-508444:1:exon

TRNAI-GAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1002788
gene: TRNAI-GAU
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA isoleucine (anticodon GAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:508406..508408,aa:Ile,seq:gat)
SIO_010081: TRNAI-GAU
subclass of: SO_0000673
so part of: TRNAI-GAU
location: 508374..508444
location: region:508374-508444:1
so has part: feature:508374-508444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:508374-508444:1:exon

LOC128979120
type: Gene
subclass of: SO_0000704
RO_0002162: 1002788
gene: LOC128979120
note: heterogeneous nuclear ribonucleoprotein K; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 578762..602208
location: region:578762-602208:1
so has part: feature:578762-602208:1:exon
subclass of: SO_0000010

128979120
type: Gene
SIO_000068: ncbigene

position:578762:1
position: 578762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602208:1
position: 602208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578762-602208:1:exon

LOC128979120
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1002788
gene: LOC128979120
product: heterogeneous nuclear ribonucleoprotein K, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_054397222.1
SIO_010081: LOC128979120
subclass of: SO_0000673
so part of: LOC128979120
location: join(578762..578810,580742..580839,581710..581766,583185..583228,584206..584278,584807..584920,585926..586054,587130..587437,588357..588411,597847..597897,600631..600652,600728..600810,601223..601392,602178..602208)
location: region:578762-602208:1
so has part: feature:578762-578810:1:exon
so has part: feature:580742-580839:1:exon
so has part: feature:581710-581766:1:exon
so has part: feature:583185-583228:1:exon
so has part: feature:584206-584278:1:exon
so has part: feature:584807-584920:1:exon
so has part: feature:585926-586054:1:exon
so has part: feature:587130-587437:1:exon
so has part: feature:588357-588411:1:exon
so has part: feature:597847-597897:1:exon
so has part: feature:600631-600652:1:exon
so has part: feature:600728-600810:1:exon
so has part: feature:601223-601392:1:exon
so has part: feature:602178-602208:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:578762-578810:1:exon

position:578810:1
position: 578810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:580742-580839:1:exon

position:580742:1
position: 580742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580839:1
position: 580839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581710-581766:1:exon

position:581710:1
position: 581710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581766:1
position: 581766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:583185-583228:1:exon

position:583185:1
position: 583185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583228:1
position: 583228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:584206-584278:1:exon

position:584206:1
position: 584206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584278:1
position: 584278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:584807-584920:1:exon

position:584807:1
position: 584807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584920:1
position: 584920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:585926-586054:1:exon

position:585926:1
position: 585926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586054:1
position: 586054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:587130-587437:1:exon

position:587130:1
position: 587130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587437:1
position: 587437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:588357-588411:1:exon

position:588357:1
position: 588357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588411:1
position: 588411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:597847-597897:1:exon

position:597847:1
position: 597847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597897:1
position: 597897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:600631-600652:1:exon

position:600631:1
position: 600631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600652:1
position: 600652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:600728-600810:1:exon

position:600728:1
position: 600728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600810:1
position: 600810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:601223-601392:1:exon

position:601223:1
position: 601223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601392:1
position: 601392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:602178-602208:1:exon

position:602178:1
position: 602178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128979120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1002788
gene: LOC128979120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein K isoform X4
translation: METEQQEETFTNTETNGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADTETIGEILKKIIPTLEEYQHYKSSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFTMMFDERRGRPVGFPIRGRGGFDRMPPGRGGRPIPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMSYDRRGRPGDRYDGMMMPCHVDACDDMQPPELFEGGSGYDYSYTGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYSGKFF
SIO_010081: LOC128979120
subclass of: SO_0000673
so part of: LOC128979120
location: join(578762..578810,580742..580839,581710..581766,583185..583228,584206..584278,584807..584920,585926..586054,587130..587437,588357..588411,597847..597897,600631..600652,600728..600810,601223..601392,602178..602208)
location: region:578762-602208:1
so has part: feature:578762-578810:1:exon
so has part: feature:580742-580839:1:exon
so has part: feature:581710-581766:1:exon
so has part: feature:583185-583228:1:exon
so has part: feature:584206-584278:1:exon
so has part: feature:584807-584920:1:exon
so has part: feature:585926-586054:1:exon
so has part: feature:587130-587437:1:exon
so has part: feature:588357-588411:1:exon
so has part: feature:597847-597897:1:exon
so has part: feature:600631-600652:1:exon
so has part: feature:600728-600810:1:exon
so has part: feature:601223-601392:1:exon
so has part: feature:602178-602208:1:exon

XP_054253197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578762-578810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580742-580839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581710-581766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583185-583228:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584206-584278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584807-584920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585926-586054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587130-587437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:588357-588411:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:597847-597897:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:600631-600652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:600728-600810:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:601223-601392:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602178-602208:1:exon

LOC128979120
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1002788
gene: LOC128979120
product: heterogeneous nuclear ribonucleoprotein K, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_054397221.1
SIO_010081: LOC128979120
subclass of: SO_0000673
so part of: LOC128979120
location: join(578762..578810,580742..580839,581710..581766,583185..583228,584206..584278,584807..584920,585926..586054,587130..587437,588357..588411,597847..597897,600631..600652,600728..600810,601223..601392,602117..602150)
location: region:578762-602150:1
so has part: feature:578762-578810:1:exon
so has part: feature:580742-580839:1:exon
so has part: feature:581710-581766:1:exon
so has part: feature:583185-583228:1:exon
so has part: feature:584206-584278:1:exon
so has part: feature:584807-584920:1:exon
so has part: feature:585926-586054:1:exon
so has part: feature:587130-587437:1:exon
so has part: feature:588357-588411:1:exon
so has part: feature:597847-597897:1:exon
so has part: feature:600631-600652:1:exon
so has part: feature:600728-600810:1:exon
so has part: feature:601223-601392:1:exon
so has part: feature:602117-602150:1:exon

position:602150:1
position: 602150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578762-578810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580742-580839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581710-581766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583185-583228:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584206-584278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584807-584920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585926-586054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587130-587437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:588357-588411:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:597847-597897:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:600631-600652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:600728-600810:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:601223-601392:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602117-602150:1:exon

position:602117:1
position: 602117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128979120
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1002788
gene: LOC128979120
product: heterogeneous nuclear ribonucleoprotein K, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_054397218.1
SIO_010081: LOC128979120
subclass of: SO_0000673
so part of: LOC128979120
location: join(578762..578809,580729..580839,581710..581766,583185..583228,584206..584278,584792..584920,585926..586054,587130..587437,588357..588411,597847..597897,600631..600652,600728..600810,601223..601392,602117..602150)
location: region:578762-602150:1
so has part: feature:578762-578809:1:exon
so has part: feature:580729-580839:1:exon
so has part: feature:581710-581766:1:exon
so has part: feature:583185-583228:1:exon
so has part: feature:584206-584278:1:exon
so has part: feature:584792-584920:1:exon
so has part: feature:585926-586054:1:exon
so has part: feature:587130-587437:1:exon
so has part: feature:588357-588411:1:exon
so has part: feature:597847-597897:1:exon
so has part: feature:600631-600652:1:exon
so has part: feature:600728-600810:1:exon
so has part: feature:601223-601392:1:exon
so has part: feature:602117-602150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:578762-578809:1:exon

position:578809:1
position: 578809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:580729-580839:1:exon

position:580729:1
position: 580729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581710-581766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583185-583228:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584206-584278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584792-584920:1:exon

position:584792:1
position: 584792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:585926-586054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587130-587437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:588357-588411:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:597847-597897:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:600631-600652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:600728-600810:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:601223-601392:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602117-602150:1:exon

LOC128979120
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1002788
gene: LOC128979120
product: heterogeneous nuclear ribonucleoprotein K, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_054397220.1
SIO_010081: LOC128979120
subclass of: SO_0000673
so part of: LOC128979120
location: join(578762..578809,580729..580839,581710..581766,583185..583228,584206..584278,584807..584920,585926..586054,587130..587437,588357..588411,597847..597897,600631..600652,600728..600810,601223..601392,602117..602150)
location: region:578762-602150:1
so has part: feature:578762-578809:1:exon
so has part: feature:580729-580839:1:exon
so has part: feature:581710-581766:1:exon
so has part: feature:583185-583228:1:exon
so has part: feature:584206-584278:1:exon
so has part: feature:584807-584920:1:exon
so has part: feature:585926-586054:1:exon
so has part: feature:587130-587437:1:exon
so has part: feature:588357-588411:1:exon
so has part: feature:597847-597897:1:exon
so has part: feature:600631-600652:1:exon
so has part: feature:600728-600810:1:exon
so has part: feature:601223-601392:1:exon
so has part: feature:602117-602150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:578762-578809:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580729-580839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581710-581766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583185-583228:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584206-584278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584807-584920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585926-586054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587130-587437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:588357-588411:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:597847-597897:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:600631-600652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:600728-600810:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:601223-601392:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602117-602150:1:exon

LOC128979120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1002788
gene: LOC128979120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein K isoform X3
translation: METEQQEETFTNTETNGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADTETIGEILKKIIPTLEEYQHYKSSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFTMMFDERRGRPVGFPIRGRGGFDRMPPGRGGRPIPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMSYDRRGRPGDRYDGMMMPCHVDACDDMQPPELFEGGSGYDYSYTGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
SIO_010081: LOC128979120
subclass of: SO_0000673
so part of: LOC128979120
location: join(578762..578810,580742..580839,581710..581766,583185..583228,584206..584278,584807..584920,585926..586054,587130..587437,588357..588411,597847..597897,600631..600652,600728..600810,601223..601392,602117..602150)
location: region:578762-602150:1
so has part: feature:578762-578810:1:exon
so has part: feature:580742-580839:1:exon
so has part: feature:581710-581766:1:exon
so has part: feature:583185-583228:1:exon
so has part: feature:584206-584278:1:exon
so has part: feature:584807-584920:1:exon
so has part: feature:585926-586054:1:exon
so has part: feature:587130-587437:1:exon
so has part: feature:588357-588411:1:exon
so has part: feature:597847-597897:1:exon
so has part: feature:600631-600652:1:exon
so has part: feature:600728-600810:1:exon
so has part: feature:601223-601392:1:exon
so has part: feature:602117-602150:1:exon

XP_054253196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578762-578810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580742-580839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581710-581766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583185-583228:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584206-584278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584807-584920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585926-586054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587130-587437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:588357-588411:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:597847-597897:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:600631-600652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:600728-600810:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:601223-601392:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602117-602150:1:exon

LOC128979120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1002788
gene: LOC128979120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein K isoform X1
translation: METEQQEETFTNTETNDLSTGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADTETIGEILKKIIPTLEEASCLQYQHYKSSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFTMMFDERRGRPVGFPIRGRGGFDRMPPGRGGRPIPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMSYDRRGRPGDRYDGMMMPCHVDACDDMQPPELFEGGSGYDYSYTGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
SIO_010081: LOC128979120
subclass of: SO_0000673
so part of: LOC128979120
location: join(578762..578809,580729..580839,581710..581766,583185..583228,584206..584278,584792..584920,585926..586054,587130..587437,588357..588411,597847..597897,600631..600652,600728..600810,601223..601392,602117..602150)
location: region:578762-602150:1
so has part: feature:578762-578809:1:exon
so has part: feature:580729-580839:1:exon
so has part: feature:581710-581766:1:exon
so has part: feature:583185-583228:1:exon
so has part: feature:584206-584278:1:exon
so has part: feature:584792-584920:1:exon
so has part: feature:585926-586054:1:exon
so has part: feature:587130-587437:1:exon
so has part: feature:588357-588411:1:exon
so has part: feature:597847-597897:1:exon
so has part: feature:600631-600652:1:exon
so has part: feature:600728-600810:1:exon
so has part: feature:601223-601392:1:exon
so has part: feature:602117-602150:1:exon

XP_054253193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578762-578809:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580729-580839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581710-581766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583185-583228:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584206-584278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584792-584920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585926-586054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587130-587437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:588357-588411:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:597847-597897:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:600631-600652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:600728-600810:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:601223-601392:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602117-602150:1:exon

LOC128979120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1002788
gene: LOC128979120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein K isoform X2
translation: METEQQEETFTNTETNDLSTGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADTETIGEILKKIIPTLEEYQHYKSSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFTMMFDERRGRPVGFPIRGRGGFDRMPPGRGGRPIPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMSYDRRGRPGDRYDGMMMPCHVDACDDMQPPELFEGGSGYDYSYTGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
SIO_010081: LOC128979120
subclass of: SO_0000673
so part of: LOC128979120
location: join(578762..578809,580729..580839,581710..581766,583185..583228,584206..584278,584807..584920,585926..586054,587130..587437,588357..588411,597847..597897,600631..600652,600728..600810,601223..601392,602117..602150)
location: region:578762-602150:1
so has part: feature:578762-578809:1:exon
so has part: feature:580729-580839:1:exon
so has part: feature:581710-581766:1:exon
so has part: feature:583185-583228:1:exon
so has part: feature:584206-584278:1:exon
so has part: feature:584807-584920:1:exon
so has part: feature:585926-586054:1:exon
so has part: feature:587130-587437:1:exon
so has part: feature:588357-588411:1:exon
so has part: feature:597847-597897:1:exon
so has part: feature:600631-600652:1:exon
so has part: feature:600728-600810:1:exon
so has part: feature:601223-601392:1:exon
so has part: feature:602117-602150:1:exon

XP_054253195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578762-578809:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580729-580839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581710-581766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583185-583228:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584206-584278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584807-584920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585926-586054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587130-587437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:588357-588411:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:597847-597897:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:600631-600652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:600728-600810:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:601223-601392:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602117-602150:1:exon

LOC128979117
type: Gene
subclass of: SO_0000704
RO_0002162: 1002788
gene: LOC128979117
note: ribonuclease H-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 692299..694123
location: region:692299-694123:1
so has part: feature:692299-694123:1:exon
subclass of: SO_0000010

128979117
type: Gene
SIO_000068: ncbigene

position:692299:1
position: 692299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694123:1
position: 694123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692299-694123:1:exon

LOC128979117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1002788
gene: LOC128979117
product: ribonuclease H-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_054397214.1
SIO_010081: LOC128979117
subclass of: SO_0000673
so part of: LOC128979117
location: join(692299..692640,694079..694123)
location: region:692299-694123:1
so has part: feature:692299-692640:1:exon
so has part: feature:694079-694123:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:692299-692640:1:exon

position:692640:1
position: 692640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:694079-694123:1:exon

position:694079:1
position: 694079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128979117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1002788
gene: LOC128979117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease H-like
translation: MDVGTDRTVTEEGEGSAQVGELRALMLAVENGAKAVYTDSYATFKGATEWICQWEANQWEIGSTEVWRASDWQRLLEIGRSRPIMVGWVKGHSKQDTLAVMWNQQVDGLARIHVRSRLEVEEPTGKRH
SIO_010081: LOC128979117
subclass of: SO_0000673
so part of: LOC128979117
location: join(692299..692640,694079..694123)
location: region:692299-694123:1
so has part: feature:692299-692640:1:exon
so has part: feature:694079-694123:1:exon

XP_054253189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:692299-692640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694079-694123:1:exon

LOC128979121
type: Gene
subclass of: SO_0000704
RO_0002162: 1002788
gene: LOC128979121
note: zinc finger protein 131-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(777240..805067)
location: region:777240-805067:-1
so has part: feature:777240-805067:-1:exon
subclass of: SO_0000010

128979121
type: Gene
SIO_000068: ncbigene

position:777240:-1
position: 777240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805067:-1
position: 805067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777240-805067:-1:exon

LOC128979121
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1002788
gene: LOC128979121
product: zinc finger protein 131-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_054397223.1
SIO_010081: LOC128979121
subclass of: SO_0000673
so part of: LOC128979121
location: complement(join(777240..777891,780473..780603,798289..798971,799973..800117,803350..803451,804944..805067))
location: region:777240-805067:-1
so has part: feature:804944-805067:-1:exon
so has part: feature:803350-803451:-1:exon
so has part: feature:799973-800117:-1:exon
so has part: feature:798289-798971:-1:exon
so has part: feature:780473-780603:-1:exon
so has part: feature:777240-777891:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:804944-805067:-1:exon

position:804944:-1
position: 804944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:803350-803451:-1:exon

position:803350:-1
position: 803350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803451:-1
position: 803451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:799973-800117:-1:exon

position:799973:-1
position: 799973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800117:-1
position: 800117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:798289-798971:-1:exon

position:798289:-1
position: 798289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798971:-1
position: 798971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:780473-780603:-1:exon

position:780473:-1
position: 780473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780603:-1
position: 780603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:777240-777891:-1:exon

position:777891:-1
position: 777891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128979121
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1002788
gene: LOC128979121
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(777577..777579),aa:OTHER)
product: LOW QUALITY PROTEIN: zinc finger protein 131-like
translation: MMECIQEFPEHYKVILDRLNEQREQDQFTDITLIVDGHHFKAHKAVLAACSQFFYKFFQDFTQEPLVEIEGVSNMAFRHLIEFTYTAKLMVQGEEEANDVWKAAEYLQMLEAIKALEIRNKENSSPLESNQMQGKYKLKKRKIAETSNVITETLPSADSEPVEIEVEIAEGTIEVEDDSTETLEVASAEQSIKYLQTTGTSDESALALLADITSKYRQGETKRQIQEGDGATDPSCKQVEGIETVELQLSHMKNLFHCEKCNRSFKLFYHFKEHMKTHSTESYKCDICNKRYLRESALKQHFTCYHLDEGGASKKQRPGKKIHICQYCNKQFDHFGHFKEHLRKHTGEKPFECPNCHEHFARNSTLKCHLMACQSGAGAKKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPNHCTLCDLWFMQGSELRRHLKDMHNISEQIVTEQVLPVEAEPVTSMTIIEQVEQVHVLPVIQVRVDPAQVTVEQMHQDLMXNSQVKGTQMEELQEQVQISYLEVEHFQTEQGAEVHVEQLHVQHVNQIQMEDVQTELIGGTDLEQVEYESVDQGEAKQKEISHIDNIDKEDHKQDEDLXTQQLVNTQNEKVDD
SIO_010081: LOC128979121
subclass of: SO_0000673
so part of: LOC128979121
location: complement(join(777240..777891,780473..780603,798289..798971,799973..800117,803350..803451,804944..805052))
location: region:777240-805052:-1
so has part: feature:804944-805052:-1:exon
so has part: feature:803350-803451:-1:exon
so has part: feature:799973-800117:-1:exon
so has part: feature:798289-798971:-1:exon
so has part: feature:780473-780603:-1:exon
so has part: feature:777240-777891:-1:exon

XP_054253198.1
type: Protein
SIO_000068: ncbiprotein

position:805052:-1
position: 805052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804944-805052:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:803350-803451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:799973-800117:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:798289-798971:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:780473-780603:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:777240-777891:-1:exon