Ustilago maydis 521 chromosome 10, whole genome shotgun sequence.
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago.

Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis

Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

Submitted (02-SEP-2014) Institute of Bioinformatics and Systems Biology, Helmholtz Zentrum Muenchen, German Research Center for Environmental Health (GmbH), Ingolstaedter Landstrasse 1, Neuherberg, Bavaria 85764, Germany

Submitted (23-JUL-2003) Whitehead Institute/MIT Center for Genome Research, 320 Charles Street, Cambridge, MA 02142, USA

PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003149.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2014\nAssembly Method :: Arachne v. May-2005\nAssembly Name :: Umaydis521_2.0\nGenome Coverage :: 10.0x\nSequencing Technology :: Sanger\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##

related to beta-1,3-glucan binding protein

related to MMM1 - required for mitochondrial shape and structure

related to TRZ1 - tRNase Z, involved in RNA processing

related to VTC1 subunit of the vacuolar transporter chaperone complex

putative aldehyde dehydrogenase family 7 member A1

related to MGS1 - Maintenance of Genome Stability 1

putative NADH dehydrogenase (ubiquinone)

putative transcription initiation factor iia gamma chain

related to SPS19 peroxisomal 2,4-dienoyl-CoA reductase

related to RAD54 - DNA-dependent ATPase of the Snf2p family

UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase

related to ALG7 - UDP-N-acetylglucosamine-1-phosphate transferase

related to TFA1 - TFIIE subunit (transcription initiation factor), 66 kD

related to YVC1 - vacuolar cation channel

putative E2 ubiquitin-conjugating protein

related to Neural Wiskott-Aldrich syndrome protein

related to TAD2 - subunit of tRNA-specific adenosine-34 deaminase

related to SIZ1 - E3-like factor in the SUMO pathway

phosphopantothenate--cysteine ligase CAB2

related to CAB2 - probable phosphopantothenoylcysteine synthetase

putative amino acid transmembrane transporter

related to YJU2 - essential protein required for pre-mRNA splicing

related to Mannosyl-oligosaccharide 1,2-alpha-mannosidase IC

related to OAC1 - similarity to mitochondrial uncoupling proteins (MCF)

related to KIC1 - ser/thr protein kinase that interacts with Cdc31p

related to conserved oligomeric Golgi complex component 2

putative CPR1 - cyclophilin (peptidylprolyl isomerase) (isoform B)

putative CPR1 - cyclophilin (peptidylprolyl isomerase) (isoform A)

related to HOS4 - subunit of the Set3 complex

related to BNA2 - putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase

related to para-aminobenzoic acid synthetase

putative cell division control protein CDC3

related to long-chain-fatty-acid-CoA ligase

related to PDS5 - precocious dissociation of sister chromatids

related to COX19 - Cytochrome c oxidase assembly protein

related to Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase PTEN

related to GLE2 - required for nuclear pore complex structure and function

putative thioredoxin-disulfide reductase TRR2

putative ATP-dependent RNA helicase DBP5

tRNA 1-methyladenosine methyltransferase subunit GCD10

related to GCD10 - translation initiation factor eIF3 RNA-binding subunit

putative nuclear zinc-finger motif containing protein

related to PIN4 - protein involved in G2/M phase progression and response to DNA damage

related to tetrahydrofolylpolyglutamate synthase (met6+)

putative positive effector protein GCN20

related to MCR1 - cytochrome-b5 reductase

mRNA-binding ubiquitin-specific protease UBP3

related to Ubiquitin carboxyl-terminal hydrolase 10

related to SPN1 - Spt6-interacting putative elongation factor

related to HFI1 - adaptor protein required for structural integrity of the SAGA complex

related to dis1-suppressing protein kinase dsk1

TATA-binding protein-associated factor TAF6

related to TAF6 - Subunit (60 kDa) of TFIID and SAGA complexes

related to AVL9 - protein involved in exocytic transport from the Golgi

1-phosphatidylinositol-4-phosphate 5-kinase

related to phosphatidylinositol-4-phosphate 5-kinase

related to YPT7 - GTP-binding protein of the RAB family

putative protein with a possible role in tRNA export

related to PRP12 - involved in early maturation of pre-rRNA

related to PEP5 - vacuolar biogenesis protein

putative pyridoxine biosynthesis protein SNZ1

putative ubiquinol-cytochrome-c reductase Rieske iron-sulfur protein

rRNA-binding ribosome biosynthesis protein UTP23

related to UTP23 - essential nucleolar protein that is a component of the SSU processome

related to BNA2 - tryptophan 2,3-dioxygenase

putative DNA-directed RNA polymerases I, II and III subunit protein

putative guanine nucleotide exchange factor

biotin--[acetyl-CoA-carboxylase] ligase BPL1

related to BPL1 - biotin holocarboxylase synthetase

related to RCL1 - RNA terminal phosphate cyclase-like protein

bifunctional endoribonuclease/protein kinase IRE1

related to SYF1 - member of the NineTeen Complex involved in splicing

related to SSF1 - Nucleolar protein involved in the assembly of the large ribosomal subunit

related to succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial precursor

related to PRI2 - DNA-directed DNA polymerase alpha, 58 KD subunit (DNA primase)

related to NUP170 - nuclear pore protein

putative pyruvate dehydrogenase (acetyl-transferring) subunit E1 alpha

related to swi/snf-related matrix-associated actin-dependent regulator of chromatin, subfamily c, member 1

putative glutamine amidotransferase/cyclase

related to VPS27 - vacuolar protein sorting-associated protein

putative DNA-directed RNA polymerase II core subunit RPO21

related to GTPase-activating protein beta-chimerin

snoRNA-binding rRNA-processing protein UTP6

related to ATP11 - F1F0-ATPase complex assembly protein