Spiroplasma culicicola AES-1 chromosome, complete genome.
Bacteria; Tenericutes; Mollicutes; Entomoplasmatales; Spiroplasmataceae; Spiroplasma.

Molecular evolution of the substrate utilization strategies and putative virulence factors in mosquito-associated Spiroplasma species

Submitted (14-AUG-2013) Institute of Plant and Microbial Biology, Academia Sinica, 128 Sec. 2, Academia Rd., Taipei 115, Taiwan

REFSEQ INFORMATION: The reference sequence is identical to\nCP006681.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: ALLPATH-LG release v. 42781\nAssembly Name :: SCULI_v1\nGenome Coverage :: 691X (paired-end reads); 1575X (mate-pair\n reads)\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/18/2022 12:36:33\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,105\nCDSs (total) :: 1,070\nGenes (coding) :: 1,062\nCDSs (with protein) :: 1,062\nGenes (RNA) :: 35\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 29\nncRNAs :: 3\nPseudo Genes (total) :: 8\nCDSs (without protein) :: 8\nPseudo Genes (ambiguous residues) :: 0 of 8\nPseudo Genes (frameshifted) :: 0 of 8\nPseudo Genes (incomplete) :: 8 of 8\nPseudo Genes (internal stop) :: 0 of 8\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

COORDINATES: protein motif:HMM:TIGR00362.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA

COORDINATES: protein motif:HMM:TIGR00663.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_003226808.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B

COORDINATES: similar to AA sequence:RefSeq:WP_004028024.1
GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit A

COORDINATES: similar to AA sequence:RefSeq:WP_011182914.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]

signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
Derived by automated computational analysis using gene prediction method: cmsearch.

COORDINATES: protein motif:HMM:NF025793.2

COORDINATES: protein motif:HMM:TIGR02397.1

COORDINATES: protein motif:HMM:NF025044.2

COORDINATES: similar to AA sequence:RefSeq:WP_016340267.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]

COORDINATES: protein motif:HMM:NF024575.2

COORDINATES: similar to AA sequence:RefSeq:WP_011183570.1
GO:0008168 - methyltransferase activity [Evidence IEA]

COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011183568.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]

COORDINATES: protein motif:HMM:NF013589.2

COORDINATES: similar to AA sequence:RefSeq:WP_016340276.1

COORDINATES: protein motif:HMM:NF019887.2
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]

COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.

COORDINATES: similar to AA sequence:RefSeq:WP_011182926.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_016340279.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]

COORDINATES: protein motif:HMM:NF015548.2

COORDINATES: protein motif:HMM:NF013308.2

COORDINATES: protein motif:HMM:TIGR00166.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]

COORDINATES: protein motif:HMM:TIGR00621.2

COORDINATES: similar to AA sequence:RefSeq:WP_004648825.1

COORDINATES: similar to AA sequence:RefSeq:WP_004029072.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011182981.1
GO:0003678 - DNA helicase activity [Evidence IEA]

COORDINATES: protein motif:HMM:NF038029.1

COORDINATES: protein motif:HMM:NF003592.0
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_004027969.1

COORDINATES: protein motif:HMM:TIGR00435.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]

COORDINATES: protein motif:HMM:TIGR00186.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB

COORDINATES: similar to AA sequence:RefSeq:WP_011182986.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]

GO:0005886 - plasma membrane [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011182988.1
transcription termination/antitermination protein NusG

COORDINATES: protein motif:HMM:NF012387.2

COORDINATES: similar to AA sequence:RefSeq:WP_016339340.1

COORDINATES: similar to AA sequence:RefSeq:WP_011183505.1

COORDINATES: nucleotide motif:Rfam:14.4:RF00557
ribosomal protein L10 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.

COORDINATES: similar to AA sequence:RefSeq:WP_011183500.1
GO:0015934 - large ribosomal subunit [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_005599214.1

COORDINATES: protein motif:HMM:NF024803.2

COORDINATES: similar to AA sequence:RefSeq:WP_016338860.1

COORDINATES: similar to AA sequence:RefSeq:WP_004028011.1

COORDINATES: protein motif:HMM:NF012869.2

COORDINATES: similar to AA sequence:RefSeq:WP_004028066.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit beta

COORDINATES: similar to AA sequence:RefSeq:WP_011183495.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit beta'

COORDINATES: similar to AA sequence:RefSeq:WP_016340394.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011183004.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]

COORDINATES: protein motif:HMM:NF012347.2

COORDINATES: similar to AA sequence:RefSeq:WP_011183007.1

COORDINATES: protein motif:HMM:TIGR01144.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]

COORDINATES: protein motif:HMM:NF009975.0

COORDINATES: similar to AA sequence:RefSeq:WP_004028351.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_016340365.1

COORDINATES: similar to AA sequence:RefSeq:WP_020045332.1

COORDINATES: protein motif:HMM:NF014838.2

COORDINATES: protein motif:HMM:NF014759.2

COORDINATES: protein motif:HMM:NF013378.2

COORDINATES: similar to AA sequence:RefSeq:WP_011182954.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015450 - protein-transporting ATPase activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_004027689.1

COORDINATES: similar to AA sequence:RefSeq:WP_016341160.1

COORDINATES: similar to AA sequence:RefSeq:WP_004027624.1
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein

COORDINATES: similar to AA sequence:RefSeq:WP_004027625.1

COORDINATES: similar to AA sequence:RefSeq:WP_016339290.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_000441062.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_016338549.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]

COORDINATES: protein motif:HMM:NF019850.2
GO:0009058 - biosynthetic process [Evidence IEA]

GO:0005215 - transporter activity [Evidence IEA]
folate family ECF transporter S component

COORDINATES: protein motif:HMM:TIGR00679.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]

COORDINATES: protein motif:HMM:NF013915.2
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]
prolipoprotein diacylglyceryl transferase

COORDINATES: similar to AA sequence:RefSeq:WP_016338537.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011182963.1
GO:0043937 - regulation of sporulation [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011183353.1
helix-turn-helix transcriptional regulator

rhodanese-like domain-containing protein

COORDINATES: similar to AA sequence:RefSeq:WP_004028344.1

COORDINATES: similar to AA sequence:RefSeq:WP_011183106.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011183107.1

COORDINATES: similar to AA sequence:RefSeq:WP_011183111.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_004027622.1
GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]

COORDINATES: nucleotide motif:Rfam:14.4:RF00023

COORDINATES: protein motif:HMM:NF012772.2

COORDINATES: protein motif:HMM:TIGR00400.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011183115.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB

COORDINATES: similar to AA sequence:RefSeq:WP_016340300.1

COORDINATES: protein motif:HMM:NF014684.2

COORDINATES: similar to AA sequence:RefSeq:WP_016339089.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_004028681.1
GO:0043096 - purine nucleobase salvage [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011183382.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD

COORDINATES: protein motif:HMM:NF013577.2
MurR/RpiR family transcriptional regulator

COORDINATES: protein motif:HMM:NF013408.2

COORDINATES: protein motif:HMM:TIGR01427.1
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]
fructose-specific PTS transporter subunit EIIC

COORDINATES: similar to AA sequence:RefSeq:WP_011183378.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]

COORDINATES: protein motif:HMM:NF018028.2

COORDINATES: protein motif:HMM:NF012371.2
serine hydrolase domain-containing protein

COORDINATES: similar to AA sequence:RefSeq:WP_011183464.1

COORDINATES: similar to AA sequence:RefSeq:WP_004028458.1

COORDINATES: protein motif:HMM:NF012235.2

COORDINATES: similar to AA sequence:RefSeq:WP_011183417.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase

COORDINATES: similar to AA sequence:RefSeq:WP_004027921.1

type II CAAX endopeptidase family protein

COORDINATES: protein motif:HMM:NF013045.2

COORDINATES: similar to AA sequence:RefSeq:WP_004027919.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]

COORDINATES: protein motif:HMM:NF014716.2
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC

COORDINATES: similar to AA sequence:RefSeq:WP_011183059.1

COORDINATES: similar to AA sequence:RefSeq:WP_011183060.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB

COORDINATES: protein motif:HMM:NF014325.2

COORDINATES: protein motif:HMM:NF014443.2

COORDINATES: protein motif:HMM:NF012905.2

Derived by automated computational analysis using gene prediction method: tRNAscan-SE.

COORDINATES: protein motif:HMM:TIGR00099.1

COORDINATES: similar to AA sequence:RefSeq:WP_016339207.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011183409.1

COORDINATES: protein motif:HMM:NF012738.2

COORDINATES: protein motif:HMM:NF013703.2
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]

COORDINATES: protein motif:HMM:TIGR01524.1
GO:0015444 - P-type magnesium transporter activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_019235960.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011183152.1
ATP-binding cassette domain-containing protein

COORDINATES: protein motif:HMM:NF015355.2
GO:0008514 - organic anion transmembrane transporter activity [Evidence IEA]
GO:0015711 - organic anion transport [Evidence IEA]
2-hydroxycarboxylate transporter family protein

COORDINATES: protein motif:HMM:NF009726.0

COORDINATES: protein motif:HMM:NF015297.2
GO:0003824 - catalytic activity [Evidence IEA]

COORDINATES: protein motif:HMM:TIGR01584.1
GO:0009346 - ATP-independent citrate lyase complex [Evidence IEA]
GO:0008815 - citrate (pro-3S)-lyase activity [Evidence IEA]; GO:0008814 - citrate CoA-transferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]

COORDINATES: protein motif:HMM:TIGR03124.1
GO:0050519 - holo-citrate lyase synthase activity [Evidence IEA]
GO:0051191 - prosthetic group biosynthetic process [Evidence IEA]
citrate lyase holo-[acyl-carrier protein] synthase

COORDINATES: protein motif:HMM:NF019824.2
adenylyltransferase/cytidyltransferase family protein

COORDINATES: protein motif:HMM:NF013991.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0046917 - triphosphoribosyl-dephospho-CoA synthase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
triphosphoribosyl-dephospho-CoA synthase

COORDINATES: protein motif:HMM:NF013263.2
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase

COORDINATES: protein motif:HMM:NF024487.2

COORDINATES: similar to AA sequence:RefSeq:WP_016339359.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]

COORDINATES: protein motif:HMM:NF024747.2
4Fe-4S single cluster domain-containing protein

COORDINATES: protein motif:HMM:NF013077.2

GO:0022857 - transmembrane transporter activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_004028983.1
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase

COORDINATES: protein motif:HMM:NF013436.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_004028523.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]

COORDINATES: protein motif:HMM:NF024910.2

COORDINATES: similar to AA sequence:RefSeq:WP_004028491.1
GO:0016491 - oxidoreductase activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_004027738.1
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_004028304.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_016340559.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase

COORDINATES: nucleotide motif:Rfam:14.4:RF00167
purine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.

COORDINATES: protein motif:HMM:NF019604.2

COORDINATES: similar to AA sequence:RefSeq:WP_011183393.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE

COORDINATES: similar to AA sequence:RefSeq:WP_011183392.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB

COORDINATES: similar to AA sequence:RefSeq:WP_001040954.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]

COORDINATES: protein motif:HMM:NF014691.2

COORDINATES: similar to AA sequence:RefSeq:WP_004029059.1

COORDINATES: protein motif:HMM:TIGR00589.1
methylated-DNA--[protein]-cysteine S-methyltransferase

COORDINATES: protein motif:HMM:NF012692.2

COORDINATES: similar to AA sequence:RefSeq:WP_016340944.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]

COORDINATES: protein motif:HMM:NF025054.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]

COORDINATES: protein motif:HMM:NF012472.2

COORDINATES: protein motif:HMM:NF013980.2

COORDINATES: protein motif:HMM:NF012451.2

COORDINATES: similar to AA sequence:RefSeq:WP_011183367.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_017466665.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]

COORDINATES: protein motif:HMM:NF013718.2

COORDINATES: similar to AA sequence:RefSeq:WP_011183362.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_004027671.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011183071.1

COORDINATES: similar to AA sequence:RefSeq:WP_004027558.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_016339037.1

COORDINATES: protein motif:HMM:NF013567.2

COORDINATES: similar to AA sequence:RefSeq:WP_016338489.1

COORDINATES: protein motif:HMM:NF014437.2

COORDINATES: similar to AA sequence:RefSeq:WP_004029055.1

COORDINATES: protein motif:HMM:NF039260.1
MupG family TIM beta-alpha barrel fold protein

COORDINATES: protein motif:HMM:NF012457.2

COORDINATES: similar to AA sequence:RefSeq:WP_004028362.1
PTS lactose/cellobiose transporter subunit IIA

COORDINATES: similar to AA sequence:RefSeq:WP_004027557.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]

COORDINATES: protein motif:HMM:NF013397.2
formate/nitrite transporter family protein

ABC transporter ATP-binding protein/permease

COORDINATES: similar to AA sequence:RefSeq:WP_002305086.1

COORDINATES: similar to AA sequence:RefSeq:WP_016339021.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_012095718.1

COORDINATES: similar to AA sequence:RefSeq:WP_011183087.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_016339152.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]

COORDINATES: protein motif:HMM:NF039482.1

COORDINATES: protein motif:HMM:NF012790.2

COORDINATES: similar to AA sequence:RefSeq:WP_011182989.1

COORDINATES: protein motif:HMM:NF013727.2

COORDINATES: similar to AA sequence:RefSeq:WP_011182998.1
GO:0009381 - excinuclease ABC activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_004028714.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]

COORDINATES: protein motif:HMM:TIGR00096.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase

COORDINATES: nucleotide motif:Rfam:14.4:RF00559
ribosomal protein L21 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.

COORDINATES: similar to AA sequence:RefSeq:WP_000457386.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.

COORDINATES: protein motif:HMM:NF016233.2
ribosomal-processing cysteine protease Prp

COORDINATES: similar to AA sequence:RefSeq:WP_004028592.1

COORDINATES: protein motif:HMM:TIGR01887.1
GO:0016805 - dipeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
Sapep family Mn(2+)-dependent dipeptidase

COORDINATES: similar to AA sequence:RefSeq:WP_004028546.1
GO:0008199 - ferric iron binding [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_023026095.1

COORDINATES: similar to AA sequence:RefSeq:WP_016340895.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011183301.1
type 1 glutamine amidotransferase domain-containing protein

COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.

GO:0015234 - thiamine transmembrane transporter activity [Evidence IEA]
GO:0015888 - thiamine transport [Evidence IEA]
energy-coupled thiamine transporter ThiT

COORDINATES: similar to AA sequence:RefSeq:WP_011183454.1
GO:0033862 - UMP kinase activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_016340582.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]

COORDINATES: protein motif:HMM:NF013431.2

COORDINATES: similar to AA sequence:RefSeq:WP_016340669.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase

COORDINATES: protein motif:HMM:NF014654.2

COORDINATES: protein motif:HMM:TIGR00281.1
GO:0005515 - protein binding [Evidence IEA]
GO:0007059 - chromosome segregation [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011183446.1

COORDINATES: similar to AA sequence:RefSeq:WP_011183445.1

COORDINATES: similar to AA sequence:RefSeq:WP_016340956.1
YebC/PmpR family DNA-binding transcriptional regulator

COORDINATES: protein motif:HMM:NF015290.2
fructose-bisphosphatase class II family protein

COORDINATES: similar to AA sequence:RefSeq:WP_016338781.1

COORDINATES: protein motif:HMM:TIGR00017.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_016338703.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011183097.1
GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006072 - glycerol-3-phosphate metabolic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

COORDINATES: similar to AA sequence:RefSeq:WP_004399274.1

COORDINATES: protein motif:HMM:TIGR04548.1

COORDINATES: protein motif:HMM:NF015777.2

COORDINATES: protein motif:HMM:NF016959.2

COORDINATES: nucleotide motif:Rfam:14.4:RF00011

COORDINATES: protein motif:HMM:NF014517.2

COORDINATES: protein motif:HMM:TIGR02012.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]

COORDINATES: protein motif:HMM:NF014069.2

COORDINATES: similar to AA sequence:RefSeq:WP_011183488.1

COORDINATES: similar to AA sequence:RefSeq:WP_016338729.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_016341027.1

COORDINATES: protein motif:HMM:NF014629.2
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH

COORDINATES: protein motif:HMM:TIGR03596.1

COORDINATES: similar to AA sequence:RefSeq:WP_011183435.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011183017.1

COORDINATES: protein motif:HMM:NF012382.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme

COORDINATES: similar to AA sequence:RefSeq:WP_016338941.1

COORDINATES: similar to AA sequence:RefSeq:WP_016340820.1
GO:0045454 - cell redox homeostasis [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_016340819.1
GO:0015293 - symporter activity [Evidence IEA]
dicarboxylate/amino acid:cation symporter

GO:0003697 - single-stranded DNA binding [Evidence IEA]

COORDINATES: protein motif:HMM:NF014533.2
GO:0009294 - DNA-mediated transformation [Evidence IEA]

COORDINATES: protein motif:HMM:NF013056.2

COORDINATES: protein motif:HMM:NF021427.2

COORDINATES: similar to AA sequence:RefSeq:WP_004028370.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO

COORDINATES: similar to AA sequence:RefSeq:WP_011183440.1

COORDINATES: protein motif:HMM:TIGR02273.1
GO:0006364 - rRNA processing [Evidence IEA]
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.

COORDINATES: similar to AA sequence:RefSeq:WP_011183438.1
GO:0009019 - tRNA (guanine-N1-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD

COORDINATES: similar to AA sequence:RefSeq:WP_004028473.1

COORDINATES: protein motif:HMM:NF022868.2

COORDINATES: similar to AA sequence:RefSeq:WP_011183420.1
GO:0003924 - GTPase activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011183419.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]

COORDINATES: protein motif:HMM:TIGR04561.1

COORDINATES: similar to AA sequence:RefSeq:WP_016338720.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_016341101.1

COORDINATES: similar to AA sequence:RefSeq:WP_004027819.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA

COORDINATES: protein motif:HMM:NF013212.2

COORDINATES: similar to AA sequence:RefSeq:WP_011183314.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_013615649.1

COORDINATES: protein motif:HMM:NF013705.2
chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; Derived by automated computational analysis using gene prediction method: Protein Homology.

COORDINATES: similar to AA sequence:RefSeq:WP_019269505.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_004027597.1

COORDINATES: protein motif:HMM:NF022525.2

COORDINATES: similar to AA sequence:RefSeq:WP_011183308.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011183306.1

COORDINATES: similar to AA sequence:RefSeq:WP_011183304.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_004028629.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_016338789.1
replication-associated recombination protein A

COORDINATES: protein motif:HMM:TIGR04547.1

COORDINATES: similar to AA sequence:RefSeq:WP_016338958.1

COORDINATES: protein motif:HMM:NF013053.2

COORDINATES: protein motif:HMM:TIGR01953.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011166544.1

COORDINATES: similar to AA sequence:RefSeq:WP_011183192.1

COORDINATES: similar to AA sequence:RefSeq:WP_004028212.1
GO:0019843 - rRNA binding [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]

COORDINATES: protein motif:HMM:NF015513.2

COORDINATES: protein motif:HMM:NF019618.2

COORDINATES: protein motif:HMM:TIGR00046.1

COORDINATES: protein motif:HMM:NF012578.2

COORDINATES: similar to AA sequence:RefSeq:WP_011182908.1

COORDINATES: similar to AA sequence:RefSeq:WP_016338993.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]

COORDINATES: protein motif:HMM:NF018299.2

COORDINATES: protein motif:HMM:NF014177.2
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0032775 - DNA methylation on adenine [Evidence IEA]

COORDINATES: protein motif:HMM:NF013964.2
HNH endonuclease signature motif containing protein

DNA phosphorothioation system sulfurtransferase DndC

COORDINATES: protein motif:HMM:NF024977.2

COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]

COORDINATES: protein motif:HMM:NF038283.1
viperin family antiviral radical SAM protein

ABC transporter substrate-binding protein

COORDINATES: protein motif:HMM:NF013219.2
iron chelate uptake ABC transporter family permease subunit

COORDINATES: protein motif:HMM:NF024867.2

COORDINATES: protein motif:HMM:NF012789.2

COORDINATES: protein motif:HMM:NF022063.2

COORDINATES: similar to AA sequence:RefSeq:WP_004028723.1

COORDINATES: protein motif:HMM:NF019368.2

COORDINATES: protein motif:HMM:NF013539.2

COORDINATES: protein motif:HMM:NF013756.2

COORDINATES: protein motif:HMM:NF015588.2

COORDINATES: protein motif:HMM:NF024811.2
GO:0008801 - beta-phosphoglucomutase activity [Evidence IEA]
GO:0046352 - disaccharide catabolic process [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_011183398.1

COORDINATES: protein motif:HMM:NF012610.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]

COORDINATES: protein motif:HMM:NF013772.2

COORDINATES: protein motif:HMM:NF013854.2
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase

COORDINATES: similar to AA sequence:RefSeq:WP_004028662.1
tRNA (cytidine(34)-2'-O)-methyltransferase

COORDINATES: similar to AA sequence:RefSeq:WP_016340599.1

COORDINATES: protein motif:HMM:NF040105.1

COORDINATES: protein motif:HMM:NF012863.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_004572363.1

COORDINATES: protein motif:HMM:NF014627.2

COORDINATES: protein motif:HMM:NF037998.2

COORDINATES: similar to AA sequence:RefSeq:WP_011183173.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]

COORDINATES: protein motif:HMM:TIGR00691.1
GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]

COORDINATES: protein motif:HMM:TIGR04522.1

COORDINATES: protein motif:HMM:NF012234.2

COORDINATES: protein motif:HMM:NF012669.2
DeoR/GlpR family DNA-binding transcription regulator

COORDINATES: similar to AA sequence:RefSeq:WP_011183077.1
1-phosphofructokinase family hexose kinase

COORDINATES: similar to AA sequence:RefSeq:WP_011183078.1

COORDINATES: similar to AA sequence:RefSeq:WP_016340729.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_004028149.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]

COORDINATES: protein motif:HMM:NF005587.0

COORDINATES: protein motif:HMM:NF013591.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]

COORDINATES: protein motif:HMM:NF012784.2
GO:0003676 - nucleic acid binding [Evidence IEA]
S1 RNA-binding domain-containing protein

COORDINATES: similar to AA sequence:RefSeq:WP_011183211.1

COORDINATES: similar to AA sequence:RefSeq:WP_002359081.1

COORDINATES: similar to AA sequence:RefSeq:WP_016338791.1
GO:1902560 - GMP reductase complex [Evidence IEA]
GO:0003920 - GMP reductase activity [Evidence IEA]
GO:0006163 - purine nucleotide metabolic process [Evidence IEA]

COORDINATES: similar to AA sequence:RefSeq:WP_016339096.1

COORDINATES: similar to AA sequence:RefSeq:WP_016340662.1
GO:0004849 - uridine kinase activity [Evidence IEA]

COORDINATES: protein motif:HMM:NF012515.2

COORDINATES: similar to AA sequence:RefSeq:WP_004028263.1
GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]

COORDINATES: protein motif:HMM:NF004044.1

COORDINATES: protein motif:HMM:NF024991.2

COORDINATES: protein motif:HMM:NF033571.0

COORDINATES: similar to AA sequence:RefSeq:WP_016339028.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase

COORDINATES: similar to AA sequence:RefSeq:WP_011183018.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]

COORDINATES: protein motif:HMM:NF024671.2

COORDINATES: protein motif:HMM:TIGR00521.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC

COORDINATES: similar to AA sequence:RefSeq:WP_008362785.1

COORDINATES: similar to AA sequence:RefSeq:WP_011183319.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB

COORDINATES: protein motif:HMM:NF036772.2

COORDINATES: similar to AA sequence:RefSeq:WP_004028170.1
GO:0008962 - phosphatidylglycerophosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015170.2
COORDINATES: similar to AA sequence:RefSeq:WP_002318736.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183246.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016340731.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF014690.2
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: protein motif:HMM:NF013231.2
COORDINATES: protein motif:HMM:NF013821.2
COORDINATES: similar to AA sequence:RefSeq:WP_004572365.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF014342.2
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: protein motif:HMM:NF012488.2
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:NF013216.2
COORDINATES: protein motif:HMM:TIGR00237.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01280.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183014.1
GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF024688.2
COORDINATES: similar to AA sequence:RefSeq:WP_011183226.1
COORDINATES: protein motif:HMM:NF013015.2
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021759.2
COORDINATES: similar to AA sequence:RefSeq:WP_016341227.1
COORDINATES: protein motif:HMM:NF024242.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF017911.2
COORDINATES: similar to AA sequence:RefSeq:WP_011183267.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000072239.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF038065.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183253.1
COORDINATES: protein motif:HMM:NF013356.2
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013570.2
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF015722.2
formylglycine-generating enzyme family protein
COORDINATES: protein motif:HMM:NF013080.2
COORDINATES: similar to AA sequence:RefSeq:WP_011182931.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183514.1
COORDINATES: similar to AA sequence:RefSeq:WP_004027699.1
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:NF015288.2
COORDINATES: similar to AA sequence:RefSeq:WP_011183542.1
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF013739.2
COORDINATES: similar to AA sequence:RefSeq:WP_011183254.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: protein motif:HMM:NF016109.2
COORDINATES: protein motif:HMM:NF014326.2
COORDINATES: protein motif:HMM:NF014368.2
COORDINATES: protein motif:HMM:NF013300.2
GO:0004560 - alpha-L-fucosidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004051.0
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: protein motif:HMM:NF014552.2
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016341075.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012009788.1
COORDINATES: protein motif:HMM:TIGR00174.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: protein motif:HMM:NF024783.2
COORDINATES: protein motif:HMM:NF012372.2
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016338991.1
COORDINATES: protein motif:HMM:NF015944.2
COORDINATES: protein motif:HMM:NF012907.2
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: protein motif:HMM:NF013232.2
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
COORDINATES: similar to AA sequence:RefSeq:WP_011183272.1
nicotinate-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:TIGR01484.1
COORDINATES: similar to AA sequence:RefSeq:WP_004029119.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: protein motif:HMM:NF013909.2
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: protein motif:HMM:NF016689.2
COORDINATES: similar to AA sequence:RefSeq:WP_004028577.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009252629.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183163.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF004064.0
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016340865.1
COORDINATES: protein motif:HMM:TIGR00043.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014617.2
COORDINATES: similar to AA sequence:RefSeq:WP_011183185.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016340586.1
COORDINATES: protein motif:HMM:TIGR00243.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: protein motif:HMM:TIGR00055.1
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011183278.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183279.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183016.1
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013702.2
lysophospholipid acyltransferase family protein
COORDINATES: protein motif:HMM:NF012413.2
COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: protein motif:HMM:NF013514.2
GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016292882.1
rhomboid family intramembrane serine protease
COORDINATES: similar to AA sequence:RefSeq:WP_016340902.1
COORDINATES: protein motif:HMM:NF013421.2
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011183288.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_003004530.1
COORDINATES: similar to AA sequence:RefSeq:WP_003004369.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016338813.1
COORDINATES: protein motif:HMM:NF016363.2
COORDINATES: similar to AA sequence:RefSeq:WP_016339053.1
COORDINATES: similar to AA sequence:RefSeq:WP_004027580.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: protein motif:HMM:TIGR00242.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_016339057.1
COORDINATES: protein motif:HMM:NF036799.2
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011183298.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: similar to AA sequence:RefSeq:WP_011183156.1
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: protein motif:HMM:NF020341.2
COORDINATES: similar to AA sequence:RefSeq:WP_011183151.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016338589.1
COORDINATES: similar to AA sequence:RefSeq:WP_016340395.1
COORDINATES: similar to AA sequence:RefSeq:WP_016339350.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF013738.2
iron-sulfur cluster assembly scaffold protein
COORDINATES: protein motif:HMM:NF013614.2
SufD family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_012726854.1
COORDINATES: similar to AA sequence:RefSeq:WP_004027960.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183141.1
COORDINATES: protein motif:HMM:NF012584.2
COORDINATES: similar to AA sequence:RefSeq:WP_011183139.1
COORDINATES: protein motif:HMM:NF015866.2
COORDINATES: similar to AA sequence:RefSeq:WP_017370549.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_016338879.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183136.1
GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016205.2
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016340377.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_016340935.1
COORDINATES: protein motif:HMM:TIGR02135.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_000226683.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:TIGR00974.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04505.1
phosphate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF014516.2
COORDINATES: similar to AA sequence:RefSeq:WP_011183128.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011183127.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016339169.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183126.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183125.1
Asp23/Gls24 family envelope stress response protein
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016339171.1
COORDINATES: similar to AA sequence:RefSeq:WP_004027749.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:NF019334.2
COORDINATES: similar to AA sequence:RefSeq:WP_011183117.1
protein phosphatase 2C domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016341044.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: protein motif:HMM:NF013362.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: similar to AA sequence:RefSeq:WP_011183092.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004028520.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_016338712.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016340562.1
COORDINATES: protein motif:HMM:NF012544.2
COORDINATES: similar to AA sequence:RefSeq:WP_011183003.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183475.1
COORDINATES: similar to AA sequence:RefSeq:WP_004028292.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: protein motif:HMM:NF018914.2
COORDINATES: protein motif:HMM:TIGR00577.1
GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011183480.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00594.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183482.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011183484.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016338870.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_004028949.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF024098.2
COORDINATES: similar to AA sequence:RefSeq:WP_011183485.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016341131.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183486.1
COORDINATES: protein motif:HMM:NF013734.2
COORDINATES: protein motif:HMM:NF014679.2
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: similar to AA sequence:RefSeq:WP_016339268.1
COORDINATES: protein motif:HMM:NF012927.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016339012.1
COORDINATES: similar to AA sequence:RefSeq:WP_016339213.1
COORDINATES: protein motif:HMM:NF013256.2
COORDINATES: protein motif:HMM:NF012579.2
COORDINATES: protein motif:HMM:NF012424.2
COORDINATES: protein motif:HMM:NF017464.2
COORDINATES: protein motif:HMM:NF015983.2
GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
pyruvate formate-lyase-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1
COORDINATES: similar to AA sequence:RefSeq:WP_016292895.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011182941.1
COORDINATES: similar to AA sequence:RefSeq:WP_011182940.1
GO:0008959 - phosphate acetyltransferase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01510.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00671.1
GO:0004594 - pantothenate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016341108.1
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_016340970.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
vitamin B12-dependent ribonucleotide reductase
COORDINATES: similar to AA sequence:RefSeq:WP_016341194.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183391.1
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: protein motif:HMM:NF013575.2
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016340460.1
energy-coupling factor transporter transmembrane component T
COORDINATES: protein motif:HMM:TIGR04521.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
energy-coupling factor transporter ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_011183049.1
COORDINATES: protein motif:HMM:NF026098.2
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007085264.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004028450.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_016338630.1
COORDINATES: similar to AA sequence:RefSeq:WP_000090796.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:WP_005909510.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183042.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183041.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011183039.1
COORDINATES: similar to AA sequence:RefSeq:WP_016911111.1
COORDINATES: similar to AA sequence:RefSeq:WP_014973704.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183036.1
COORDINATES: similar to AA sequence:RefSeq:WP_004028440.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1
COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1
COORDINATES: similar to AA sequence:RefSeq:WP_004028436.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183031.1
COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
COORDINATES: similar to AA sequence:RefSeq:WP_011983253.1
COORDINATES: protein motif:HMM:TIGR00012.1
COORDINATES: similar to AA sequence:RefSeq:WP_018133712.1
COORDINATES: similar to AA sequence:RefSeq:WP_016338612.1
COORDINATES: similar to AA sequence:RefSeq:WP_016340472.1
COORDINATES: similar to AA sequence:RefSeq:WP_001829710.1
COORDINATES: similar to AA sequence:RefSeq:WP_002213425.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183022.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183021.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183020.1
COORDINATES: similar to AA sequence:RefSeq:WP_012084982.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016340981.1
dual specificity protein phosphatase family protein
COORDINATES: protein motif:HMM:NF024716.2
COORDINATES: similar to AA sequence:RefSeq:WP_011183510.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: similar to AA sequence:RefSeq:WP_011182939.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016338688.1
dihydrolipoamide acetyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016338687.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011182936.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: protein motif:HMM:TIGR00545.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016339231.1
COORDINATES: protein motif:HMM:NF014664.2
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012787.2
COORDINATES: similar to AA sequence:RefSeq:WP_016339239.1
COORDINATES: similar to AA sequence:RefSeq:WP_003640798.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183519.1
COORDINATES: similar to AA sequence:RefSeq:WP_014035361.1
COORDINATES: similar to AA sequence:RefSeq:WP_016293564.1
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF020451.2
COORDINATES: protein motif:HMM:NF036885.2
COORDINATES: similar to AA sequence:RefSeq:WP_011183212.1
COORDINATES: similar to AA sequence:RefSeq:WP_013855195.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
class 1b ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011183427.1
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI
COORDINATES: similar to AA sequence:RefSeq:WP_011183428.1
GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
class 1b ribonucleoside-diphosphate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011183149.1
COORDINATES: protein motif:HMM:NF013468.2
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011183530.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016340290.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003151132.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004028913.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
class II fructose-1,6-bisphosphate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_004029065.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04567.1
DNA-directed RNA polymerase subunit delta
COORDINATES: similar to AA sequence:RefSeq:WP_011183547.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014588.2
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1
COORDINATES: protein motif:HMM:NF017879.2
COORDINATES: similar to AA sequence:RefSeq:WP_004028381.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_016340433.1
COORDINATES: similar to AA sequence:RefSeq:WP_011183558.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_016338557.1
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_011182933.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012383.2
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011182972.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011182971.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011182974.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011182973.1
COORDINATES: similar to AA sequence:RefSeq:WP_004028302.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016338460.1
COORDINATES: similar to AA sequence:RefSeq:WP_011182902.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_011182901.1
GO:0043822 - ribonuclease M5 activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004028008.1
COORDINATES: protein motif:HMM:NF018435.2
COORDINATES: similar to AA sequence:RefSeq:WP_016341230.1
COORDINATES: similar to AA sequence:RefSeq:WP_004028481.1
COORDINATES: protein motif:HMM:TIGR00010.1
COORDINATES: similar to AA sequence:RefSeq:WP_011182911.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: protein motif:HMM:NF014186.2
COORDINATES: similar to AA sequence:RefSeq:WP_011183578.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003014180.1