NC_000021.8
type: Entry
definition: Homo sapiens chromosome 21, GRCh37.p13 Primary Assembly.
comment: Homo sapiens chromosome 21, GRCh37.p13 Primary Assembly.
sequence version: NC_000021.8
sequence date: 2013-08-13
sequence: sequence
division: CON
type: RefSeq
SIO_000068: refseq
dblink: PRJNA168
keyword: RefSeq
source: Homo sapiens (human)
organism: Homo sapiens
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
reference: reference.1
reference: reference.2
reference: reference.3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000683.1.\n[WARNING] On Feb 3, 2014 this sequence was replaced by\ngi:568815577.\nOn Jun 10, 2009 this sequence version replaced gi:51511750.\nAssembly Name: GRCh37.p13 Primary Assembly\nThe DNA sequence is composed of genomic sequence, primarily\nfinished clones that were sequenced as part of the Human Genome\nProject. PCR products and WGS shotgun sequence have been added\nwhere necessary to fill gaps or correct errors. All such additions\nare manually curated by GRC staff. For more information see:\nhttp://genomereference.org.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Homo sapiens Annotation Release 105\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 5.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 48129895
topology: linear
so has quality: SO_0000987
location: 1..48129895
location: region:1-48129895:1
RO_0002162: 9606

NC_000021
type: RefSeq
SIO_000068: refseq

PRJNA168
type: BioProject
SIO_000068: bioproject

reference.1
SIO_000300: 1
title: Finishing the euchromatic sequence of the human genome
journal: Nature
volume: 431
issue: 7011
pages: 931-945
year: 2004
pubmed: 15496913

15496913
type: PubMed
SIO_000068: pubmed

reference.2
SIO_000300: 2
title: Initial sequencing and analysis of the human genome
author: Lander, E.S.
author: Linton, L.M.
author: Birren, B.
author: Nusbaum, C.
author: Zody, M.C.
author: Baldwin, J.
author: Devon, K.
author: Dewar, K.
author: Doyle, M.
author: FitzHugh, W.
author: Funke, R.
author: Gage, D.
author: Harris, K.
author: Heaford, A.
author: Howland, J.
author: Kann, L.
author: Lehoczky, J.
author: LeVine, R.
author: McEwan, P.
author: McKernan, K.
author: Meldrim, J.
author: Mesirov, J.P.
author: Miranda, C.
author: Morris, W.
author: Naylor, J.
author: Raymond, C.
author: Rosetti, M.
author: Santos, R.
author: Sheridan, A.
author: Sougnez, C.
author: Stange-Thomann, N.
author: Stojanovic, N.
author: Subramanian, A.
author: Wyman, D.
author: Rogers, J.
author: Sulston, J.
author: Ainscough, R.
author: Beck, S.
author: Bentley, D.
author: Burton, J.
author: Clee, C.
author: Carter, N.
author: Coulson, A.
author: Deadman, R.
author: Deloukas, P.
author: Dunham, A.
author: Dunham, I.
author: Durbin, R.
author: French, L.
author: Grafham, D.
author: Gregory, S.
author: Hubbard, T.
author: Humphray, S.
author: Hunt, A.
author: Jones, M.
author: Lloyd, C.
author: McMurray, A.
author: Matthews, L.
author: Mercer, S.
author: Milne, S.
author: Mullikin, J.C.
author: Mungall, A.
author: Plumb, R.
author: Ross, M.
author: Shownkeen, R.
author: Sims, S.
author: Waterston, R.H.
author: Wilson, R.K.
author: Hillier, L.W.
author: McPherson, J.D.
author: Marra, M.A.
author: Mardis, E.R.
author: Fulton, L.A.
author: Chinwalla, A.T.
author: Pepin, K.H.
author: Gish, W.R.
author: Chissoe, S.L.
author: Wendl, M.C.

11237011
type: PubMed
SIO_000068: pubmed

reference.3
SIO_000300: 3
title: The DNA sequence of human chromosome 21
author: Hattori, M.
author: Fujiyama, A.
author: Taylor, T.D.
author: Watanabe, H.
author: Yada, T.
author: Park, H.S.
author: Toyoda, A.
author: Ishii, K.
author: Totoki, Y.
author: Choi, D.K.
author: Groner, Y.
author: Soeda, E.
author: Ohki, M.
author: Takagi, T.
author: Sakaki, Y.
author: Taudien, S.
author: Blechschmidt, K.
author: Polley, A.
author: Menzel, U.
author: Delabar, J.
author: Kumpf, K.
author: Lehmann, R.
author: Patterson, D.
author: Reichwald, K.
author: Rump, A.
author: Schillhabel, M.
author: Schudy, A.
author: Zimmermann, W.
author: Rosenthal, A.
author: Kudoh, J.
author: Schibuya, K.
author: Kawasaki, K.
author: Asakawa, S.
author: Shintani, A.
author: Sasaki, T.
author: Nagamine, K.
author: Mitsuyama, S.
author: Antonarakis, S.E.
author: Minoshima, S.
author: Shimizu, N.
author: Nordsiek, G.
author: Hornischer, K.
author: Brant, P.
author: Scharfe, M.
author: Schon, O.
author: Desario, A.
author: Reichelt, J.
author: Kauer, G.
author: Blocker, H.
author: Ramser, J.
author: Beck, A.
author: Klages, S.
author: Hennig, S.
author: Riesselmann, L.
author: Dagand, E.
author: Haaf, T.
author: Wehrmeyer, S.
author: Borzym, K.
author: Gardiner, K.
author: Nizetic, D.
author: Francis, F.
author: Lehrach, H.
author: Reinhardt, R.
author: Yaspo, M.L.
journal: Nature
volume: 405
issue: 6784
pages: 311-319
year: 2000
pubmed: 10830953
comments: Erratum:[Nature 2000 Sep 7;407(6800):110]

10830953
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48129895:1
position: 48129895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-48129895:1:source
so part of: sequence
organism: Homo sapiens
mol type: genomic DNA
chromosome: 21

9606
type: Taxonomy
SIO_000068: taxonomy

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 10000
gap type: telomere
so part of: sequence
location: 1..10000
location: region:1-10000:1
so has part: feature:1-10000:1:region

position:10000:1
position: 10000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-10000:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 5201193
gap type: short arm
so part of: sequence
location: 10001..5211193
location: region:10001-5211193:1
so has part: feature:10001-5211193:1:region

position:10001:1
position: 10001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5211193:1
position: 5211193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10001-5211193:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 4200000
gap type: between scaffolds
so part of: sequence
location: 5211194..9411193
location: region:5211194-9411193:1
so has part: feature:5211194-9411193:1:region

position:5211194:1
position: 5211194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9411193:1
position: 9411193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5211194-9411193:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 9595549..9645548
location: region:9595549-9645548:1
so has part: feature:9595549-9645548:1:region

position:9595549:1
position: 9595549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9645548:1
position: 9645548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9595549-9645548:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 9775438..9825437
location: region:9775438-9825437:1
so has part: feature:9775438-9825437:1:region

position:9775438:1
position: 9775438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9825437:1
position: 9825437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9775438-9825437:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 10034921..10084920
location: region:10034921-10084920:1
so has part: feature:10034921-10084920:1:region

position:10034921:1
position: 10034921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10084920:1
position: 10084920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10034921-10084920:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 150000
gap type: between scaffolds
so part of: sequence
location: 10215977..10365976
location: region:10215977-10365976:1
so has part: feature:10215977-10365976:1:region

position:10215977:1
position: 10215977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10365976:1
position: 10365976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10215977-10365976:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 10647897..10697896
location: region:10647897-10697896:1
so has part: feature:10647897-10697896:1:region

position:10647897:1
position: 10647897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10697896:1
position: 10697896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10647897-10697896:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 11188130..11238129
location: region:11188130-11238129:1
so has part: feature:11188130-11238129:1:region

position:11188130:1
position: 11188130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11238129:1
position: 11238129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11188130-11238129:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: heterochromatin
so part of: sequence
location: 11238130..11288129
location: region:11238130-11288129:1
so has part: feature:11238130-11288129:1:region

position:11238130:1
position: 11238130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11288129:1
position: 11288129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11238130-11288129:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 3000000
gap type: centromere
so part of: sequence
location: 11288130..14288129
location: region:11288130-14288129:1
so has part: feature:11288130-14288129:1:region

position:11288130:1
position: 11288130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14288129:1
position: 14288129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11288130-14288129:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 14288130..14338129
location: region:14288130-14338129:1
so has part: feature:14288130-14338129:1:region

position:14288130:1
position: 14288130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14338129:1
position: 14338129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14288130-14338129:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 42955560..43005559
location: region:42955560-43005559:1
so has part: feature:42955560-43005559:1:region

position:42955560:1
position: 42955560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43005559:1
position: 43005559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42955560-43005559:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 10000
gap type: telomere
so part of: sequence
location: 48119896..48129895
location: region:48119896-48129895:1
so has part: feature:48119896-48129895:1:region

position:48119896:1
position: 48119896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48119896-48129895:1:region

LOC100420925
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC100420925
note: chromosome 2 open reading frame 27A pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 10614447..10615032
location: region:10614447-10615032:1
so has part: feature:10614447-10615032:1:exon

100420925
type: Gene
SIO_000068: ncbigene

position:10614447:1
position: 10614447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10615032:1
position: 10615032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10614447-10615032:1:exon

IGHV1OR21-1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: IGHV1OR21-1
note: immunoglobulin heavy variable 1/OR21-1 (non-functional); Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 10862622..10863067
location: region:10862622-10863067:1
so has part: feature:10862622-10863067:1:exon

390530
type: Gene
SIO_000068: ncbigene

HGNC:38040
type: HGNC
SIO_000068: hgnc

position:10862622:1
position: 10862622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10863067:1
position: 10863067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10862622-10863067:1:exon

SLC25A15P4
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: SLC25A15P4
note: solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 pseudogene 4; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 10899078..10900002
location: region:10899078-10900002:1
so has part: feature:10899078-10900002:1:exon

100422636
type: Gene
SIO_000068: ncbigene

HGNC:39845
type: HGNC
SIO_000068: hgnc

position:10899078:1
position: 10899078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10900002:1
position: 10900002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10899078-10900002:1:exon

TPTE
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CT44
alternative label: PTEN2
gene: TPTE
gene synonym: CT44; PTEN2
note: transmembrane phosphatase with tensin homology; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(10906741..10990920)
location: region:10906741-10990920:-1
so has part: feature:10906741-10990920:-1:exon
subclass of: SO_0000010

7179
type: Gene
SIO_000068: ncbigene

HGNC:12023
type: HGNC
SIO_000068: hgnc

604336
type: OMIM
SIO_000068: omim

position:10906741:-1
position: 10906741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10990920:-1
position: 10990920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10906741-10990920:-1:exon

TPTE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CT44
alternative label: PTEN2
gene: TPTE
gene synonym: CT44; PTEN2
product: transmembrane phosphatase with tensin homology, transcript variant 3
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_199260.2
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_199260.2
SIO_010081: TPTE
subclass of: SO_0000673
so part of: TPTE
location: complement(join(10906741..10907040,10908825..10908895,10910307..10910399,10914363..10914442,10916370..10916475,10920084..10920164,10921934..10921995,10933852..10933940,10934039..10934120,10934937..10934997,10941908..10941972,10942711..10942774,10942921..10943020,10944668..10944787,10951266..10951427,10952913..10952963,10970009..10970062,10971292..10971345,10973723..10973776,10985045..10985102,10987769..10987877,10990763..10990920))
location: region:10906741-10990920:-1
so has part: feature:10990763-10990920:-1:exon
so has part: feature:10987769-10987877:-1:exon
so has part: feature:10985045-10985102:-1:exon
so has part: feature:10973723-10973776:-1:exon
so has part: feature:10971292-10971345:-1:exon
so has part: feature:10970009-10970062:-1:exon
so has part: feature:10952913-10952963:-1:exon
so has part: feature:10951266-10951427:-1:exon
so has part: feature:10944668-10944787:-1:exon
so has part: feature:10942921-10943020:-1:exon
so has part: feature:10942711-10942774:-1:exon
so has part: feature:10941908-10941972:-1:exon
so has part: feature:10934937-10934997:-1:exon
so has part: feature:10934039-10934120:-1:exon
so has part: feature:10933852-10933940:-1:exon
so has part: feature:10921934-10921995:-1:exon
so has part: feature:10920084-10920164:-1:exon
so has part: feature:10916370-10916475:-1:exon
so has part: feature:10914363-10914442:-1:exon
so has part: feature:10910307-10910399:-1:exon
so has part: feature:10908825-10908895:-1:exon
so has part: feature:10906741-10907040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10990763-10990920:-1:exon

position:10990763:-1
position: 10990763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10987769-10987877:-1:exon

position:10987769:-1
position: 10987769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10987877:-1
position: 10987877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10985045-10985102:-1:exon

position:10985045:-1
position: 10985045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10985102:-1
position: 10985102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10973723-10973776:-1:exon

position:10973723:-1
position: 10973723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10973776:-1
position: 10973776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10971292-10971345:-1:exon

position:10971292:-1
position: 10971292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10971345:-1
position: 10971345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10970009-10970062:-1:exon

position:10970009:-1
position: 10970009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10970062:-1
position: 10970062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10952913-10952963:-1:exon

position:10952913:-1
position: 10952913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10952963:-1
position: 10952963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10951266-10951427:-1:exon

position:10951266:-1
position: 10951266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10951427:-1
position: 10951427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10944668-10944787:-1:exon

position:10944668:-1
position: 10944668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10944787:-1
position: 10944787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10942921-10943020:-1:exon

position:10942921:-1
position: 10942921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10943020:-1
position: 10943020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10942711-10942774:-1:exon

position:10942711:-1
position: 10942711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10942774:-1
position: 10942774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10941908-10941972:-1:exon

position:10941908:-1
position: 10941908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10941972:-1
position: 10941972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:10934937-10934997:-1:exon

position:10934937:-1
position: 10934937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10934997:-1
position: 10934997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:10934039-10934120:-1:exon

position:10934039:-1
position: 10934039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10934120:-1
position: 10934120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:10933852-10933940:-1:exon

position:10933852:-1
position: 10933852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10933940:-1
position: 10933940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:10921934-10921995:-1:exon

position:10921934:-1
position: 10921934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10921995:-1
position: 10921995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:10920084-10920164:-1:exon

position:10920084:-1
position: 10920084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10920164:-1
position: 10920164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:10916370-10916475:-1:exon

position:10916370:-1
position: 10916370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10916475:-1
position: 10916475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:10914363-10914442:-1:exon

position:10914363:-1
position: 10914363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10914442:-1
position: 10914442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:10910307-10910399:-1:exon

position:10910307:-1
position: 10910307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10910399:-1
position: 10910399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:10908825-10908895:-1:exon

position:10908825:-1
position: 10908825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10908895:-1
position: 10908895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:10906741-10907040:-1:exon

position:10907040:-1
position: 10907040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TPTE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CT44
alternative label: PTEN2
gene: TPTE
gene synonym: CT44; PTEN2
product: transmembrane phosphatase with tensin homology, transcript variant 2
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_199259.2
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_199259.2
SIO_010081: TPTE
subclass of: SO_0000673
so part of: TPTE
location: complement(join(10906741..10907040,10908825..10908895,10910307..10910399,10914363..10914442,10916370..10916475,10920084..10920164,10921934..10921995,10933852..10933940,10934039..10934120,10934937..10934997,10941908..10941972,10942711..10942774,10942921..10943020,10944668..10944787,10951266..10951427,10952913..10952963,10959741..10959800,10970009..10970062,10971292..10971345,10973723..10973776,10985045..10985102,10987769..10987877,10990763..10990920))
location: region:10906741-10990920:-1
so has part: feature:10990763-10990920:-1:exon
so has part: feature:10987769-10987877:-1:exon
so has part: feature:10985045-10985102:-1:exon
so has part: feature:10973723-10973776:-1:exon
so has part: feature:10971292-10971345:-1:exon
so has part: feature:10970009-10970062:-1:exon
so has part: feature:10959741-10959800:-1:exon
so has part: feature:10952913-10952963:-1:exon
so has part: feature:10951266-10951427:-1:exon
so has part: feature:10944668-10944787:-1:exon
so has part: feature:10942921-10943020:-1:exon
so has part: feature:10942711-10942774:-1:exon
so has part: feature:10941908-10941972:-1:exon
so has part: feature:10934937-10934997:-1:exon
so has part: feature:10934039-10934120:-1:exon
so has part: feature:10933852-10933940:-1:exon
so has part: feature:10921934-10921995:-1:exon
so has part: feature:10920084-10920164:-1:exon
so has part: feature:10916370-10916475:-1:exon
so has part: feature:10914363-10914442:-1:exon
so has part: feature:10910307-10910399:-1:exon
so has part: feature:10908825-10908895:-1:exon
so has part: feature:10906741-10907040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10990763-10990920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10987769-10987877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10985045-10985102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10973723-10973776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10971292-10971345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10970009-10970062:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10959741-10959800:-1:exon

position:10959741:-1
position: 10959741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10959800:-1
position: 10959800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10952913-10952963:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10951266-10951427:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10944668-10944787:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10942921-10943020:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10942711-10942774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10941908-10941972:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10934937-10934997:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10934039-10934120:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10933852-10933940:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10921934-10921995:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10920084-10920164:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10916370-10916475:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10914363-10914442:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10910307-10910399:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10908825-10908895:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10906741-10907040:-1:exon

TPTE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CT44
alternative label: PTEN2
gene: TPTE
gene synonym: CT44; PTEN2
product: transmembrane phosphatase with tensin homology, transcript variant 1
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_199261.2
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_199261.2
SIO_010081: TPTE
subclass of: SO_0000673
so part of: TPTE
location: complement(join(10906741..10907040,10908825..10908895,10910307..10910399,10914363..10914442,10916370..10916475,10920084..10920164,10921934..10921995,10933852..10933940,10934039..10934120,10934937..10934997,10941908..10941972,10942711..10942774,10942921..10943020,10944668..10944787,10951266..10951427,10952913..10952963,10959741..10959800,10969075..10969128,10970009..10970062,10971292..10971345,10973723..10973776,10985045..10985102,10987769..10987877,10990763..10990920))
location: region:10906741-10990920:-1
so has part: feature:10990763-10990920:-1:exon
so has part: feature:10987769-10987877:-1:exon
so has part: feature:10985045-10985102:-1:exon
so has part: feature:10973723-10973776:-1:exon
so has part: feature:10971292-10971345:-1:exon
so has part: feature:10970009-10970062:-1:exon
so has part: feature:10969075-10969128:-1:exon
so has part: feature:10959741-10959800:-1:exon
so has part: feature:10952913-10952963:-1:exon
so has part: feature:10951266-10951427:-1:exon
so has part: feature:10944668-10944787:-1:exon
so has part: feature:10942921-10943020:-1:exon
so has part: feature:10942711-10942774:-1:exon
so has part: feature:10941908-10941972:-1:exon
so has part: feature:10934937-10934997:-1:exon
so has part: feature:10934039-10934120:-1:exon
so has part: feature:10933852-10933940:-1:exon
so has part: feature:10921934-10921995:-1:exon
so has part: feature:10920084-10920164:-1:exon
so has part: feature:10916370-10916475:-1:exon
so has part: feature:10914363-10914442:-1:exon
so has part: feature:10910307-10910399:-1:exon
so has part: feature:10908825-10908895:-1:exon
so has part: feature:10906741-10907040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10990763-10990920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10987769-10987877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10985045-10985102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10973723-10973776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10971292-10971345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10970009-10970062:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10969075-10969128:-1:exon

position:10969075:-1
position: 10969075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10969128:-1
position: 10969128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10959741-10959800:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10952913-10952963:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10951266-10951427:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10944668-10944787:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10942921-10943020:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10942711-10942774:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10941908-10941972:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10934937-10934997:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10934039-10934120:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10933852-10933940:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10921934-10921995:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10920084-10920164:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10916370-10916475:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10914363-10914442:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10910307-10910399:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10908825-10908895:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:10906741-10907040:-1:exon

TPTE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CT44
alternative label: PTEN2
gene: TPTE
gene synonym: CT44; PTEN2
inference: similar to AA sequence (same species):RefSeq:NP_954869.1
exception: annotated by transcript or proteomic data
note: isoform gamma is encoded by transcript variant 3; The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: putative tyrosine-protein phosphatase TPTE isoform gamma
translation: MNESPDPTDLAGVIIELGPNDSPQTSEFKGATEEAPAKESSKIKKIVHSIVSSFAFGLFGVFLVLLDVTLILADLIFTDSKLYIPLEYRSISLAIALFFLMDVLLRVFVERRQQYFSDLFNILDTAIIVILLLVDVVYIFFDIKLLRNIPRWTHLLRLLRLIILLRIFHLFHQKRQLEKLIRRRVSENKRRYTRDGFDLDLTYVTERIIAMSFPSSGRQSFYRNPIKEVVRFLDKKHRNHYRVYNLCSERAYDPKHFHNRVVRIMIDDHNVPTLHQMVVFTKEVNEWMAQDLENIVAIHCKGGTDRTGTMVCAFLIASEICSTAKESLYYFGERRTDKTHSEKFQGVETPSQKRYVAYFAQVKHLYNWNLPPRRILFIKHFIIYSIPRYVRDLKIQIEMEKKVVFSTISLGKCSVLDNITTDKILIDVFDGLPLYDDVKVQFFYSNLPTYYDNCSFYFWLHTSFIENNRLYLPKNELDNLHKQKARRIYPSDFAVEILFGEKMTSSDVVAGSD
SIO_010081: TPTE
subclass of: SO_0000673
so part of: TPTE
location: complement(join(10906905..10907040,10908825..10908895,10910307..10910399,10914363..10914442,10916370..10916475,10920084..10920164,10921934..10921995,10933852..10933940,10934039..10934120,10934937..10934997,10941908..10941972,10942711..10942774,10942921..10943020,10944668..10944787,10951266..10951427,10952913..10952963,10970009..10970062,10971292..10971345,10973723..10973733))
location: region:10906905-10973733:-1
so has part: feature:10973723-10973733:-1:exon
so has part: feature:10971292-10971345:-1:exon
so has part: feature:10970009-10970062:-1:exon
so has part: feature:10952913-10952963:-1:exon
so has part: feature:10951266-10951427:-1:exon
so has part: feature:10944668-10944787:-1:exon
so has part: feature:10942921-10943020:-1:exon
so has part: feature:10942711-10942774:-1:exon
so has part: feature:10941908-10941972:-1:exon
so has part: feature:10934937-10934997:-1:exon
so has part: feature:10934039-10934120:-1:exon
so has part: feature:10933852-10933940:-1:exon
so has part: feature:10921934-10921995:-1:exon
so has part: feature:10920084-10920164:-1:exon
so has part: feature:10916370-10916475:-1:exon
so has part: feature:10914363-10914442:-1:exon
so has part: feature:10910307-10910399:-1:exon
so has part: feature:10908825-10908895:-1:exon
so has part: feature:10906905-10907040:-1:exon

NP_954869.1
type: Protein
SIO_000068: ncbiprotein

CCDS33511.1
type: CCDS
SIO_000068: ccds

position:10906905:-1
position: 10906905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10973733:-1
position: 10973733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10973723-10973733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10971292-10971345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10970009-10970062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10952913-10952963:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10951266-10951427:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10944668-10944787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10942921-10943020:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10942711-10942774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10941908-10941972:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10934937-10934997:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10934039-10934120:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10933852-10933940:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10921934-10921995:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10920084-10920164:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10916370-10916475:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10914363-10914442:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10910307-10910399:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10908825-10908895:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10906905-10907040:-1:exon

TPTE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CT44
alternative label: PTEN2
gene: TPTE
gene synonym: CT44; PTEN2
inference: similar to AA sequence (same species):RefSeq:NP_954868.1
exception: annotated by transcript or proteomic data
note: isoform beta is encoded by transcript variant 2; The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: putative tyrosine-protein phosphatase TPTE isoform beta
translation: MNESPDPTDLAGVIIELGPNDSPQTSEFKGATEEAPAKESVLARLSKFEVEDAENVASYDSKIKKIVHSIVSSFAFGLFGVFLVLLDVTLILADLIFTDSKLYIPLEYRSISLAIALFFLMDVLLRVFVERRQQYFSDLFNILDTAIIVILLLVDVVYIFFDIKLLRNIPRWTHLLRLLRLIILLRIFHLFHQKRQLEKLIRRRVSENKRRYTRDGFDLDLTYVTERIIAMSFPSSGRQSFYRNPIKEVVRFLDKKHRNHYRVYNLCSERAYDPKHFHNRVVRIMIDDHNVPTLHQMVVFTKEVNEWMAQDLENIVAIHCKGGTDRTGTMVCAFLIASEICSTAKESLYYFGERRTDKTHSEKFQGVETPSQKRYVAYFAQVKHLYNWNLPPRRILFIKHFIIYSIPRYVRDLKIQIEMEKKVVFSTISLGKCSVLDNITTDKILIDVFDGLPLYDDVKVQFFYSNLPTYYDNCSFYFWLHTSFIENNRLYLPKNELDNLHKQKARRIYPSDFAVEILFGEKMTSSDVVAGSD
SIO_010081: TPTE
subclass of: SO_0000673
so part of: TPTE
location: complement(join(10906905..10907040,10908825..10908895,10910307..10910399,10914363..10914442,10916370..10916475,10920084..10920164,10921934..10921995,10933852..10933940,10934039..10934120,10934937..10934997,10941908..10941972,10942711..10942774,10942921..10943020,10944668..10944787,10951266..10951427,10952913..10952963,10959741..10959800,10970009..10970062,10971292..10971345,10973723..10973733))
location: region:10906905-10973733:-1
so has part: feature:10973723-10973733:-1:exon
so has part: feature:10971292-10971345:-1:exon
so has part: feature:10970009-10970062:-1:exon
so has part: feature:10959741-10959800:-1:exon
so has part: feature:10952913-10952963:-1:exon
so has part: feature:10951266-10951427:-1:exon
so has part: feature:10944668-10944787:-1:exon
so has part: feature:10942921-10943020:-1:exon
so has part: feature:10942711-10942774:-1:exon
so has part: feature:10941908-10941972:-1:exon
so has part: feature:10934937-10934997:-1:exon
so has part: feature:10934039-10934120:-1:exon
so has part: feature:10933852-10933940:-1:exon
so has part: feature:10921934-10921995:-1:exon
so has part: feature:10920084-10920164:-1:exon
so has part: feature:10916370-10916475:-1:exon
so has part: feature:10914363-10914442:-1:exon
so has part: feature:10910307-10910399:-1:exon
so has part: feature:10908825-10908895:-1:exon
so has part: feature:10906905-10907040:-1:exon

NP_954868.1
type: Protein
SIO_000068: ncbiprotein

CCDS33512.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:10973723-10973733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10971292-10971345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10970009-10970062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10959741-10959800:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10952913-10952963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10951266-10951427:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10944668-10944787:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10942921-10943020:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10942711-10942774:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10941908-10941972:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10934937-10934997:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10934039-10934120:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10933852-10933940:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10921934-10921995:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10920084-10920164:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10916370-10916475:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10914363-10914442:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10910307-10910399:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10908825-10908895:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10906905-10907040:-1:exon

TPTE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CT44
alternative label: PTEN2
gene: TPTE
gene synonym: CT44; PTEN2
inference: similar to AA sequence (same species):RefSeq:NP_954870.2
exception: annotated by transcript or proteomic data
note: isoform alpha is encoded by transcript variant 1; The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: putative tyrosine-protein phosphatase TPTE isoform alpha
translation: MNESPDPTDLAGVIIELGPNDSPQTSEFKGATEEAPAKESPHTSEFKGAARVSPISESVLARLSKFEVEDAENVASYDSKIKKIVHSIVSSFAFGLFGVFLVLLDVTLILADLIFTDSKLYIPLEYRSISLAIALFFLMDVLLRVFVERRQQYFSDLFNILDTAIIVILLLVDVVYIFFDIKLLRNIPRWTHLLRLLRLIILLRIFHLFHQKRQLEKLIRRRVSENKRRYTRDGFDLDLTYVTERIIAMSFPSSGRQSFYRNPIKEVVRFLDKKHRNHYRVYNLCSERAYDPKHFHNRVVRIMIDDHNVPTLHQMVVFTKEVNEWMAQDLENIVAIHCKGGTDRTGTMVCAFLIASEICSTAKESLYYFGERRTDKTHSEKFQGVETPSQKRYVAYFAQVKHLYNWNLPPRRILFIKHFIIYSIPRYVRDLKIQIEMEKKVVFSTISLGKCSVLDNITTDKILIDVFDGLPLYDDVKVQFFYSNLPTYYDNCSFYFWLHTSFIENNRLYLPKNELDNLHKQKARRIYPSDFAVEILFGEKMTSSDVVAGSD
SIO_010081: TPTE
subclass of: SO_0000673
so part of: TPTE
location: complement(join(10906905..10907040,10908825..10908895,10910307..10910399,10914363..10914442,10916370..10916475,10920084..10920164,10921934..10921995,10933852..10933940,10934039..10934120,10934937..10934997,10941908..10941972,10942711..10942774,10942921..10943020,10944668..10944787,10951266..10951427,10952913..10952963,10959741..10959800,10969075..10969128,10970009..10970062,10971292..10971345,10973723..10973733))
location: region:10906905-10973733:-1
so has part: feature:10973723-10973733:-1:exon
so has part: feature:10971292-10971345:-1:exon
so has part: feature:10970009-10970062:-1:exon
so has part: feature:10969075-10969128:-1:exon
so has part: feature:10959741-10959800:-1:exon
so has part: feature:10952913-10952963:-1:exon
so has part: feature:10951266-10951427:-1:exon
so has part: feature:10944668-10944787:-1:exon
so has part: feature:10942921-10943020:-1:exon
so has part: feature:10942711-10942774:-1:exon
so has part: feature:10941908-10941972:-1:exon
so has part: feature:10934937-10934997:-1:exon
so has part: feature:10934039-10934120:-1:exon
so has part: feature:10933852-10933940:-1:exon
so has part: feature:10921934-10921995:-1:exon
so has part: feature:10920084-10920164:-1:exon
so has part: feature:10916370-10916475:-1:exon
so has part: feature:10914363-10914442:-1:exon
so has part: feature:10910307-10910399:-1:exon
so has part: feature:10908825-10908895:-1:exon
so has part: feature:10906905-10907040:-1:exon

NP_954870.2
type: Protein
SIO_000068: ncbiprotein

CCDS13560.2
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:10973723-10973733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10971292-10971345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10970009-10970062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10969075-10969128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10959741-10959800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10952913-10952963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10951266-10951427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10944668-10944787:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10942921-10943020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10942711-10942774:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10941908-10941972:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10934937-10934997:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10934039-10934120:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10933852-10933940:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10921934-10921995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10920084-10920164:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10916370-10916475:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10914363-10914442:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10910307-10910399:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10908825-10908895:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10906905-10907040:-1:exon

CYCSP41
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CYC1LP4
alternative label: HCP41
gene: CYCSP41
gene synonym: CYC1LP4; HCP41
note: cytochrome c, somatic pseudogene 41; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(10935975..10936167)
location: region:10935975-10936167:-1
so has part: feature:10935975-10936167:-1:exon

360186
type: Gene
SIO_000068: ncbigene

HGNC:2580
type: HGNC
SIO_000068: hgnc

position:10935975:-1
position: 10935975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10936167:-1
position: 10936167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10935975-10936167:-1:exon

LOC101926954
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC101926954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11015038..11049525)
location: region:11015038-11049525:-1
so has part: feature:11015038-11049525:-1:exon
subclass of: SO_0000010

101926954
type: Gene
SIO_000068: ncbigene

position:11015038:-1
position: 11015038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11049525:-1
position: 11049525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11015038-11049525:-1:exon

LOC101926954
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
gene: LOC101926954
product: histone-lysine N-methyltransferase 2C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005269267.1
SIO_010081: LOC101926954
subclass of: SO_0000673
so part of: LOC101926954
location: complement(join(11015038..11015102,11020813..11020917,11021110..11021211,11026723..11026839,11029598..11029717,11030491..11030527,11038784..11039429,11047481..11047595,11049450..11049525))
location: region:11015038-11049525:-1
so has part: feature:11049450-11049525:-1:exon
so has part: feature:11047481-11047595:-1:exon
so has part: feature:11038784-11039429:-1:exon
so has part: feature:11030491-11030527:-1:exon
so has part: feature:11029598-11029717:-1:exon
so has part: feature:11026723-11026839:-1:exon
so has part: feature:11021110-11021211:-1:exon
so has part: feature:11020813-11020917:-1:exon
so has part: feature:11015038-11015102:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11049450-11049525:-1:exon

position:11049450:-1
position: 11049450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11047481-11047595:-1:exon

position:11047481:-1
position: 11047481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11047595:-1
position: 11047595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11038784-11039429:-1:exon

position:11038784:-1
position: 11038784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11039429:-1
position: 11039429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11030491-11030527:-1:exon

position:11030491:-1
position: 11030491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11030527:-1
position: 11030527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11029598-11029717:-1:exon

position:11029598:-1
position: 11029598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11029717:-1
position: 11029717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11026723-11026839:-1:exon

position:11026723:-1
position: 11026723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11026839:-1
position: 11026839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11021110-11021211:-1:exon

position:11021110:-1
position: 11021110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11021211:-1
position: 11021211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11020813-11020917:-1:exon

position:11020813:-1
position: 11020813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11020917:-1
position: 11020917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11015038-11015102:-1:exon

position:11015102:-1
position: 11015102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101926954
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
gene: LOC101926954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase 2C-like
translation: MQMNTELEKQISNEADSEEMKMSSEVKHICGEDQIEDKMEVTENIEVVTHQITVQQEQLQLLEEPKTVVSKEESRPPKFVIESVTLPLETLVSPHEESTSLCPEEQLVIERLQGEKEQKEDSELSTGLMDSEMTPTIEGCVKDVSYQGGKSIKLSSETESSFSLSADISKADVSSSPTPSSDLPSHDMLRNYPSALSSSAGNIMPTTYISVTPKNWHGLVQGIAECGCSEEAWSTHNTVSPPSWSPDISGGREIFKPRQLPGSAIWSIKVGHGSGFPRKRRPRGAGLSGRGGRGRSKLKSGIGAVVLPGVSTADISSNKDDEENSMHTTVVLFSSSDKFTLNQDMCVVCGSFGQGAEGRLLACSQCGQCYHPYCVSIKVCLVQTLWSNICRSKM
SIO_010081: LOC101926954
subclass of: SO_0000673
so part of: LOC101926954
location: complement(join(11015052..11015102,11020813..11020917,11021110..11021211,11026723..11026839,11029598..11029717,11030491..11030527,11038784..11039429,11047481..11047487))
location: region:11015052-11047487:-1
so has part: feature:11047481-11047487:-1:exon
so has part: feature:11038784-11039429:-1:exon
so has part: feature:11030491-11030527:-1:exon
so has part: feature:11029598-11029717:-1:exon
so has part: feature:11026723-11026839:-1:exon
so has part: feature:11021110-11021211:-1:exon
so has part: feature:11020813-11020917:-1:exon
so has part: feature:11015052-11015102:-1:exon

XP_005269324.1
type: Protein
SIO_000068: ncbiprotein

position:11015052:-1
position: 11015052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11047487:-1
position: 11047487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11047481-11047487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11038784-11039429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11030491-11030527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11029598-11029717:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11026723-11026839:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11021110-11021211:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11020813-11020917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11015052-11015102:-1:exon

BAGE2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CT2.2
gene: BAGE2
gene synonym: CT2.2
note: B melanoma antigen family, member 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(11020842..11098925)
location: region:11020842-11098925:-1
so has part: feature:11020842-11098925:-1:exon
subclass of: SO_0000010

85319
type: Gene
SIO_000068: ncbigene

HGNC:15723
type: HGNC
SIO_000068: hgnc

position:11020842:-1
position: 11020842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11098925:-1
position: 11098925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11020842-11098925:-1:exon

BAGE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CT2.2
gene: BAGE2
gene synonym: CT2.2
product: B melanoma antigen family, member 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_182482.2
SIO_010081: BAGE2
subclass of: SO_0000673
so part of: BAGE2
location: complement(join(11020842..11020917,11021110..11021211,11026723..11026839,11029598..11029717,11038728..11039429,11047481..11047595,11049450..11049621,11058161..11058323,11097546..11097646,11098703..11098925))
location: region:11020842-11098925:-1
so has part: feature:11098703-11098925:-1:exon
so has part: feature:11097546-11097646:-1:exon
so has part: feature:11058161-11058323:-1:exon
so has part: feature:11049450-11049621:-1:exon
so has part: feature:11047481-11047595:-1:exon
so has part: feature:11038728-11039429:-1:exon
so has part: feature:11029598-11029717:-1:exon
so has part: feature:11026723-11026839:-1:exon
so has part: feature:11021110-11021211:-1:exon
so has part: feature:11020842-11020917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11098703-11098925:-1:exon

position:11098703:-1
position: 11098703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11097546-11097646:-1:exon

position:11097546:-1
position: 11097546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11097646:-1
position: 11097646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11058161-11058323:-1:exon

position:11058161:-1
position: 11058161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11058323:-1
position: 11058323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11049450-11049621:-1:exon

position:11049621:-1
position: 11049621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11047481-11047595:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11038728-11039429:-1:exon

position:11038728:-1
position: 11038728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11029598-11029717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11026723-11026839:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11021110-11021211:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11020842-11020917:-1:exon

BAGE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CT2.2
gene: BAGE2
gene synonym: CT2.2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: B melanoma antigen 2 precursor
translation: MAAGVVFLALSAQLLQARLMKEESPVVSWRLEPEDGTALDVHFVSTLEPLSNAVKRNVPRCIIILVLQEPTPFRISVTSSCFVQNTLTKLLKDRRKMQTVQCATARETS
SIO_010081: BAGE2
subclass of: SO_0000673
so part of: BAGE2
location: complement(join(11049571..11049621,11058161..11058323,11097546..11097646,11098703..11098717))
location: region:11049571-11098717:-1
so has part: feature:11098703-11098717:-1:exon
so has part: feature:11097546-11097646:-1:exon
so has part: feature:11058161-11058323:-1:exon
so has part: feature:11049571-11049621:-1:exon

NP_872288.2
type: Protein
SIO_000068: ncbiprotein

position:11049571:-1
position: 11049571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11098717:-1
position: 11098717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11098703-11098717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11097546-11097646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11058161-11058323:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11049571-11049621:-1:exon

VN1R7P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: ORLP1
alternative label: PHB4C5
gene: VN1R7P
gene synonym: ORLP1; PHB4C5
note: vomeronasal 1 receptor 7 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(11153077..11154804)
location: region:11153077-11154804:-1
so has part: feature:11153077-11154804:-1:exon

100132759
type: Gene
SIO_000068: ncbigene

HGNC:8496
type: HGNC
SIO_000068: hgnc

position:11153077:-1
position: 11153077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11154804:-1
position: 11154804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11153077-11154804:-1:exon

EIF3FP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: EIF3FP
alternative label: EIF3S5P
gene: EIF3FP1
gene synonym: EIF3FP; EIF3S5P
note: eukaryotic translation initiation factor 3, subunit F pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(11180762..11181817)
location: region:11180762-11181817:-1
so has part: feature:11180762-11181817:-1:exon

54053
type: Gene
SIO_000068: ncbigene

HGNC:3276
type: HGNC
SIO_000068: hgnc

position:11180762:-1
position: 11180762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11181817:-1
position: 11181817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11180762-11181817:-1:exon

EIF3FP1
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
alternative label: EIF3FP
alternative label: EIF3S5P
gene: EIF3FP1
gene synonym: EIF3FP; EIF3S5P
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: EIF3FP1
subclass of: SO_0000673
so part of: EIF3FP1
location: complement(11180762..11181817)
location: region:11180762-11181817:-1
so has part: feature:11180762-11181817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11180762-11181817:-1:exon

ANKRD30BP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: C21orf99
alternative label: CT85
alternative label: CTSP-1
alternative label: CTSP1
gene: ANKRD30BP2
gene synonym: C21orf99; CT85; CTSP-1; CTSP1
note: ankyrin repeat domain 30B pseudogene 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
pseudo: true
so part of: sequence
location: 14410487..>14490572
location: region:14410487-14490572:1
so has part: feature:14410487-14490572:1:exon

149992
type: Gene
SIO_000068: ncbigene

HGNC:16620
type: HGNC
SIO_000068: hgnc

position:14410487:1
position: 14410487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14490572:1
position: 14490572
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14410487-14490572:1:exon

ANKRD30BP2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf99
alternative label: CT85
alternative label: CTSP-1
alternative label: CTSP1
gene: ANKRD30BP2
gene synonym: C21orf99; CT85; CTSP-1; CTSP1
product: ankyrin repeat domain 30B pseudogene 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
pseudo: true
transcript id: NR_026916.1
SIO_010081: ANKRD30BP2
so part of: ANKRD30BP2
location: join(14410487..14410745,14414823..14414937,14415100..14415273,14417484..14417591,14421286..14421350,14424117..14425023,14432787..14433204,14435161..14435279,14437496..14438020,14439173..14439369,14441496..14441613,14490159..>14490572)
location: region:14410487-14490572:1
so has part: feature:14410487-14410745:1:exon
so has part: feature:14414823-14414937:1:exon
so has part: feature:14415100-14415273:1:exon
so has part: feature:14417484-14417591:1:exon
so has part: feature:14421286-14421350:1:exon
so has part: feature:14424117-14425023:1:exon
so has part: feature:14432787-14433204:1:exon
so has part: feature:14435161-14435279:1:exon
so has part: feature:14437496-14438020:1:exon
so has part: feature:14439173-14439369:1:exon
so has part: feature:14441496-14441613:1:exon
so has part: feature:14490159-14490572:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14410487-14410745:1:exon

position:14410745:1
position: 14410745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14414823-14414937:1:exon

position:14414823:1
position: 14414823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14414937:1
position: 14414937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14415100-14415273:1:exon

position:14415100:1
position: 14415100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14415273:1
position: 14415273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14417484-14417591:1:exon

position:14417484:1
position: 14417484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14417591:1
position: 14417591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14421286-14421350:1:exon

position:14421286:1
position: 14421286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14421350:1
position: 14421350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14424117-14425023:1:exon

position:14424117:1
position: 14424117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14425023:1
position: 14425023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14432787-14433204:1:exon

position:14432787:1
position: 14432787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14433204:1
position: 14433204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14435161-14435279:1:exon

position:14435161:1
position: 14435161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14435279:1
position: 14435279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:14437496-14438020:1:exon

position:14437496:1
position: 14437496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14438020:1
position: 14438020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:14439173-14439369:1:exon

position:14439173:1
position: 14439173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14439369:1
position: 14439369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:14441496-14441613:1:exon

position:14441496:1
position: 14441496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14441613:1
position: 14441613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:14490159-14490572:1:exon

position:14490159:1
position: 14490159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VN1R109P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: VN1R109P
note: vomeronasal 1 receptor 109 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(14463937..14464410)
location: region:14463937-14464410:-1
so has part: feature:14463937-14464410:-1:exon

100312851
type: Gene
SIO_000068: ncbigene

HGNC:37434
type: HGNC
SIO_000068: hgnc

position:14463937:-1
position: 14463937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14464410:-1
position: 14464410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14463937-14464410:-1:exon

ZNF355P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: PRED65
alternative label: ZNF834
gene: ZNF355P
gene synonym: PRED65; ZNF834
note: zinc finger protein 355, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(14468106..14529382)
location: region:14468106-14529382:-1
so has part: feature:14468106-14529382:-1:exon

100505852
type: Gene
SIO_000068: ncbigene

HGNC:17218
type: HGNC
SIO_000068: hgnc

position:14468106:-1
position: 14468106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14529382:-1
position: 14529382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14468106-14529382:-1:exon

LOC101928467
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC101928467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 14490806..14493128
location: region:14490806-14493128:1
so has part: feature:14490806-14493128:1:exon

101928467
type: Gene
SIO_000068: ncbigene

position:14490806:1
position: 14490806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14493128:1
position: 14493128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14490806-14493128:1:exon

LOC101928467
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC101928467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
number: 1
pseudo: true
SIO_010081: LOC101928467
subclass of: SO_0000673
so part of: LOC101928467
location: 14490806..14490925
location: region:14490806-14490925:1
so has part: feature:14490806-14490925:1:exon

position:14490925:1
position: 14490925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14490806-14490925:1:exon

LOC101928467
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC101928467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
number: 2
pseudo: true
SIO_010081: LOC101928467
subclass of: SO_0000673
so part of: LOC101928467
location: 14492541..14493128
location: region:14492541-14493128:1
so has part: feature:14492541-14493128:1:exon

position:14492541:1
position: 14492541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14492541-14493128:1:exon

FGF7P2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: FGF7L
alternative label: PRED3
gene: FGF7P2
gene synonym: FGF7L; PRED3
note: fibroblast growth factor 7 pseudogene 2; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 14721586..14725781
location: region:14721586-14725781:1
so has part: feature:14721586-14725781:1:exon

394217
type: Gene
SIO_000068: ncbigene

HGNC:17193
type: HGNC
SIO_000068: hgnc

position:14721586:1
position: 14721586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14725781:1
position: 14725781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14721586-14725781:1:exon

FGF7P2
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
alternative label: FGF7L
alternative label: PRED3
gene: FGF7P2
gene synonym: FGF7L; PRED3
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: FGF7P2
subclass of: SO_0000673
so part of: FGF7P2
location: 14721586..14721689
location: region:14721586-14721689:1
so has part: feature:14721586-14721689:1:exon

position:14721689:1
position: 14721689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14721586-14721689:1:exon

ANKRD30BP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: ANKRD30BP
alternative label: C21orf110
alternative label: PRED4
gene: ANKRD30BP1
gene synonym: ANKRD30BP; C21orf110; PRED4
note: ankyrin repeat domain 30B pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(14756163..14800096)
location: region:14756163-14800096:-1
so has part: feature:14756163-14800096:-1:exon

642460
type: Gene
SIO_000068: ncbigene

HGNC:19722
type: HGNC
SIO_000068: hgnc

position:14756163:-1
position: 14756163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14800096:-1
position: 14800096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14756163-14800096:-1:exon

MIR3156-3
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: MIR3156-3
note: microRNA 3156-3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(14778705..14778781)
location: region:14778705-14778781:-1
so has part: feature:14778705-14778781:-1:exon
subclass of: SO_0000571

100423018
type: Gene
SIO_000068: ncbigene

HGNC:38229
type: HGNC
SIO_000068: hgnc

MI0014242
type: miRBase
SIO_000068: mirbase

position:14778705:-1
position: 14778705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14778781:-1
position: 14778781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14778705-14778781:-1:exon

MIR3156-3
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 9606
gene: MIR3156-3
product: microRNA 3156-3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_036164.1
SIO_010081: MIR3156-3
subclass of: SO_0000673
so part of: MIR3156-3
location: complement(14778705..14778781)
location: region:14778705-14778781:-1
so has part: feature:14778705-14778781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14778705-14778781:-1:exon

MIR3156-3
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: miRNA
gene: MIR3156-3
product: hsa-miR-3156-5p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR3156-3
subclass of: SO_0000673
so part of: MIR3156-3
location: complement(14778752..14778773)
location: region:14778752-14778773:-1
so has part: feature:14778752-14778773:-1:exon

MIMAT0015030
type: miRBase
SIO_000068: mirbase

position:14778752:-1
position: 14778752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14778773:-1
position: 14778773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14778752-14778773:-1:exon

GTF2IP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: GTF2IP2
note: general transcription factor IIi, pseudogene 2; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(14815675..14834792)
location: region:14815675-14834792:-1
so has part: feature:14815675-14834792:-1:exon

338448
type: Gene
SIO_000068: ncbigene

HGNC:16082
type: HGNC
SIO_000068: hgnc

position:14815675:-1
position: 14815675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14834792:-1
position: 14834792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14815675-14834792:-1:exon

VN1R8P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: ORLP2
gene: VN1R8P
gene synonym: ORLP2
note: vomeronasal 1 receptor 8 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 14848562..14849776
location: region:14848562-14849776:1
so has part: feature:14848562-14849776:1:exon

54041
type: Gene
SIO_000068: ncbigene

HGNC:8497
type: HGNC
SIO_000068: hgnc

position:14848562:1
position: 14848562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14849776:1
position: 14849776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14848562-14849776:1:exon

SNX19P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: SNX19P
gene: SNX19P1
gene synonym: SNX19P
note: sorting nexin 19 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 14897424..14902332
location: region:14897424-14902332:1
so has part: feature:14897424-14902332:1:exon

378810
type: Gene
SIO_000068: ncbigene

HGNC:16765
type: HGNC
SIO_000068: hgnc

position:14897424:1
position: 14897424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14902332:1
position: 14902332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14897424-14902332:1:exon

SNX19P1
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
alternative label: SNX19P
gene: SNX19P1
gene synonym: SNX19P
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: SNX19P1
subclass of: SO_0000673
so part of: SNX19P1
location: 14897424..14902332
location: region:14897424-14902332:1
so has part: feature:14897424-14902332:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14897424-14902332:1:exon

OR4K11P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: OR21-1
gene: OR4K11P
gene synonym: OR21-1
note: olfactory receptor, family 4, subfamily K, member 11 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(14916552..14917506)
location: region:14916552-14917506:-1
so has part: feature:14916552-14917506:-1:exon

81079
type: Gene
SIO_000068: ncbigene

HGNC:15402
type: HGNC
SIO_000068: hgnc

position:14916552:-1
position: 14916552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14917506:-1
position: 14917506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14916552-14917506:-1:exon

OR4K12P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: OR21-2
gene: OR4K12P
gene synonym: OR21-2
note: olfactory receptor, family 4, subfamily K, member 12 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(14953393..14954325)
location: region:14953393-14954325:-1
so has part: feature:14953393-14954325:-1:exon

81078
type: Gene
SIO_000068: ncbigene

HGNC:15403
type: HGNC
SIO_000068: hgnc

position:14953393:-1
position: 14953393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14954325:-1
position: 14954325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14953393-14954325:-1:exon

POTED
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: A26B3
alternative label: ANKRD21
alternative label: CT104.1
alternative label: POTE
alternative label: POTE-21
alternative label: POTE21
gene: POTED
gene synonym: A26B3; ANKRD21; CT104.1; POTE; POTE-21; POTE21
note: POTE ankyrin domain family, member D; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 14982498..15013937
location: region:14982498-15013937:1
so has part: feature:14982498-15013937:1:exon
subclass of: SO_0000010

317754
type: Gene
SIO_000068: ncbigene

HGNC:23822
type: HGNC
SIO_000068: hgnc

607549
type: OMIM
SIO_000068: omim

position:14982498:1
position: 14982498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15013937:1
position: 15013937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14982498-15013937:1:exon

POTED
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: A26B3
alternative label: ANKRD21
alternative label: CT104.1
alternative label: POTE
alternative label: POTE-21
alternative label: POTE21
gene: POTED
gene synonym: A26B3; ANKRD21; CT104.1; POTE; POTE-21; POTE21
product: POTE ankyrin domain family, member D
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_174981.3
SIO_010081: POTED
subclass of: SO_0000673
so part of: POTED
location: join(14982498..14983070,14987444..14987558,14987718..14987891,14990670..14990776,14992479..14992616,14995126..14995196,15000703..15000773,15002177..15002221,15003262..15003428,15011836..15011959,15013666..15013906)
location: region:14982498-15013906:1
so has part: feature:14982498-14983070:1:exon
so has part: feature:14987444-14987558:1:exon
so has part: feature:14987718-14987891:1:exon
so has part: feature:14990670-14990776:1:exon
so has part: feature:14992479-14992616:1:exon
so has part: feature:14995126-14995196:1:exon
so has part: feature:15000703-15000773:1:exon
so has part: feature:15002177-15002221:1:exon
so has part: feature:15003262-15003428:1:exon
so has part: feature:15011836-15011959:1:exon
so has part: feature:15013666-15013906:1:exon

position:15013906:1
position: 15013906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14982498-14983070:1:exon

position:14983070:1
position: 14983070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14987444-14987558:1:exon

position:14987444:1
position: 14987444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14987558:1
position: 14987558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14987718-14987891:1:exon

position:14987718:1
position: 14987718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14987891:1
position: 14987891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14990670-14990776:1:exon

position:14990670:1
position: 14990670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14990776:1
position: 14990776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14992479-14992616:1:exon

position:14992479:1
position: 14992479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14992616:1
position: 14992616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14995126-14995196:1:exon

position:14995126:1
position: 14995126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14995196:1
position: 14995196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:15000703-15000773:1:exon

position:15000703:1
position: 15000703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15000773:1
position: 15000773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:15002177-15002221:1:exon

position:15002177:1
position: 15002177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15002221:1
position: 15002221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:15003262-15003428:1:exon

position:15003262:1
position: 15003262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15003428:1
position: 15003428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:15011836-15011959:1:exon

position:15011836:1
position: 15011836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15011959:1
position: 15011959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:15013666-15013906:1:exon

position:15013666:1
position: 15013666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POTED
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: A26B3
alternative label: ANKRD21
alternative label: CT104.1
alternative label: POTE
alternative label: POTE-21
alternative label: POTE21
gene: POTED
gene synonym: A26B3; ANKRD21; CT104.1; POTE; POTE-21; POTE21
product: POTE ankyrin domain family, member D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 5 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005260963.1
SIO_010081: POTED
subclass of: SO_0000673
so part of: POTED
location: join(14982510..14982737,14982837..14983070,14987444..14987558,14987718..14987891,14990670..14990776,14992479..14992616,14995126..14995196,15000703..15000773,15002177..15002221,15003262..15003428,15011836..15011959,15013666..15013937)
location: region:14982510-15013937:1
so has part: feature:14982510-14982737:1:exon
so has part: feature:14982837-14983070:1:exon
so has part: feature:14987444-14987558:1:exon
so has part: feature:14987718-14987891:1:exon
so has part: feature:14990670-14990776:1:exon
so has part: feature:14992479-14992616:1:exon
so has part: feature:14995126-14995196:1:exon
so has part: feature:15000703-15000773:1:exon
so has part: feature:15002177-15002221:1:exon
so has part: feature:15003262-15003428:1:exon
so has part: feature:15011836-15011959:1:exon
so has part: feature:15013666-15013937:1:exon

position:14982510:1
position: 14982510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14982510-14982737:1:exon

position:14982737:1
position: 14982737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14982837-14983070:1:exon

position:14982837:1
position: 14982837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14987444-14987558:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14987718-14987891:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14990670-14990776:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14992479-14992616:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14995126-14995196:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15000703-15000773:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15002177-15002221:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15003262-15003428:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15011836-15011959:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15013666-15013937:1:exon

POTED
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: A26B3
alternative label: ANKRD21
alternative label: CT104.1
alternative label: POTE
alternative label: POTE-21
alternative label: POTE21
gene: POTED
gene synonym: A26B3; ANKRD21; CT104.1; POTE; POTE-21; POTE21
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: POTE ankyrin domain family member D
translation: MVAEVCSMPTASTVKKPFDLRSKMGKWCHHRFPCCRGSGKSNMGTSGDHDDSFMKMLRSKMGKCCRHCFPCCRGSGTSNVGTSGDHENSFMKMLRSKMGKWCCHCFPCCRGSGKSNVGAWGDYDHSAFMEPRYHIRREDLDKLHRAAWWGKVPRKDLIVMLRDTDMNKRDKEKRTALHLASANGNSEVVQLLLDRRCQLNVLDNKKRTALIKAIQCQEDECVLMLLEHGADRNIPDEYGNTALHYAIYNEDKLMAKALLLYGADIESKNKCGLTPLLLGVHEQKQQVVKFLIKKKANLNVLDRYGRTALILAVCCGSASIVNLLLEQNVDVSSQDLSGQTAREYAVSSHHHVICELLSDYKEKQMLKISSENSNPEQDLKLTSEEESQRLKVSENSQPEKMSQEPEINKDCDREVEEEIKKHGSNPVGLPENLTNGASAGNGDDGLIPQRRSRKPENQQFPDTENEEYHSDEQNDTRKQLSEEQNTGISQDEILTNKQKQIEVAEQKMNSELSLSHKKEEDLLRENSVLQEEIAMLRLELDETKHQNQLRENKILEEIESVKEKTDKLLRAMQLNEEALTKTNI
SIO_010081: POTED
subclass of: SO_0000673
so part of: POTED
location: join(14982550..14983070,14987444..14987558,14987718..14987891,14990670..14990776,14992479..14992616,14995126..14995196,15000703..15000773,15002177..15002221,15003262..15003428,15011836..15011959,15013666..15013887)
location: region:14982550-15013887:1
so has part: feature:14982550-14983070:1:exon
so has part: feature:14987444-14987558:1:exon
so has part: feature:14987718-14987891:1:exon
so has part: feature:14990670-14990776:1:exon
so has part: feature:14992479-14992616:1:exon
so has part: feature:14995126-14995196:1:exon
so has part: feature:15000703-15000773:1:exon
so has part: feature:15002177-15002221:1:exon
so has part: feature:15003262-15003428:1:exon
so has part: feature:15011836-15011959:1:exon
so has part: feature:15013666-15013887:1:exon

NP_778146.2
type: Protein
SIO_000068: ncbiprotein

CCDS13562.1
type: CCDS
SIO_000068: ccds

position:14982550:1
position: 14982550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15013887:1
position: 15013887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14982550-14983070:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14987444-14987558:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14987718-14987891:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14990670-14990776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14992479-14992616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14995126-14995196:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15000703-15000773:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15002177-15002221:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15003262-15003428:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15011836-15011959:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15013666-15013887:1:exon

POTED
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: A26B3
alternative label: ANKRD21
alternative label: CT104.1
alternative label: POTE
alternative label: POTE-21
alternative label: POTE21
gene: POTED
gene synonym: A26B3; ANKRD21; CT104.1; POTE; POTE-21; POTE21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POTE ankyrin domain family member D isoform X1
translation: MVAEVCSMPTASTVKKPFDLRSKMGKWCHHRFPCCRGSGKSNMGTSGDHDDSFMKMLRSKMGNKMGKWCCHCFPCCRGSGKSNVGAWGDYDHSAFMEPRYHIRREDLDKLHRAAWWGKVPRKDLIVMLRDTDMNKRDKEKRTALHLASANGNSEVVQLLLDRRCQLNVLDNKKRTALIKAIQCQEDECVLMLLEHGADRNIPDEYGNTALHYAIYNEDKLMAKALLLYGADIESKNKCGLTPLLLGVHEQKQQVVKFLIKKKANLNVLDRYGRTALILAVCCGSASIVNLLLEQNVDVSSQDLSGQTAREYAVSSHHHVICELLSDYKEKQMLKISSENSNPEQDLKLTSEEESQRLKVSENSQPEKMSQEPEINKDCDREVEEEIKKHGSNPVGLPENLTNGASAGNGDDGLIPQRRSRKPENQQFPDTENEEYHSDEQNDTRKQLSEEQNTGISQDEILTNKQKQIEVAEQKMNSELSLSHKKEEDLLRENSVLQEEIAMLRLELDETKHQNQLRENKILEEIESVKEKTDKLLRAMQLNEEALTKTNI
SIO_010081: POTED
subclass of: SO_0000673
so part of: POTED
location: join(14982550..14982737,14982837..14983070,14987444..14987558,14987718..14987891,14990670..14990776,14992479..14992616,14995126..14995196,15000703..15000773,15002177..15002221,15003262..15003428,15011836..15011959,15013666..15013887)
location: region:14982550-15013887:1
so has part: feature:14982550-14982737:1:exon
so has part: feature:14982837-14983070:1:exon
so has part: feature:14987444-14987558:1:exon
so has part: feature:14987718-14987891:1:exon
so has part: feature:14990670-14990776:1:exon
so has part: feature:14992479-14992616:1:exon
so has part: feature:14995126-14995196:1:exon
so has part: feature:15000703-15000773:1:exon
so has part: feature:15002177-15002221:1:exon
so has part: feature:15003262-15003428:1:exon
so has part: feature:15011836-15011959:1:exon
so has part: feature:15013666-15013887:1:exon

XP_005261020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14982550-14982737:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14982837-14983070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14987444-14987558:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14987718-14987891:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14990670-14990776:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14992479-14992616:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14995126-14995196:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15000703-15000773:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15002177-15002221:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15003262-15003428:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15011836-15011959:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15013666-15013887:1:exon

MIR3118-5
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: MIR3118-5
note: microRNA 3118-5; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(15017096..15017171)
location: region:15017096-15017171:-1
so has part: feature:15017096-15017171:-1:exon
subclass of: SO_0000571

100422890
type: Gene
SIO_000068: ncbigene

HGNC:38351
type: HGNC
SIO_000068: hgnc

MI0014243
type: miRBase
SIO_000068: mirbase

position:15017096:-1
position: 15017096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15017171:-1
position: 15017171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15017096-15017171:-1:exon

MIR3118-5
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 9606
gene: MIR3118-5
product: microRNA 3118-5
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_036165.1
SIO_010081: MIR3118-5
subclass of: SO_0000673
so part of: MIR3118-5
location: complement(15017096..15017171)
location: region:15017096-15017171:-1
so has part: feature:15017096-15017171:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15017096-15017171:-1:exon

MIR3118-5
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: miRNA
gene: MIR3118-5
product: hsa-miR-3118
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR3118-5
subclass of: SO_0000673
so part of: MIR3118-5
location: complement(15017105..15017127)
location: region:15017105-15017127:-1
so has part: feature:15017105-15017127:-1:exon

MIMAT0014980
type: miRBase
SIO_000068: mirbase

position:15017105:-1
position: 15017105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15017127:-1
position: 15017127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15017105-15017127:-1:exon

LOC100631252
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC100631252
note: GRAM domain containing 4 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(15038188..15039878)
location: region:15038188-15039878:-1
so has part: feature:15038188-15039878:-1:exon

100631252
type: Gene
SIO_000068: ncbigene

position:15038188:-1
position: 15038188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15039878:-1
position: 15039878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15038188-15039878:-1:exon

CXADRP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CAR
alternative label: CXADRP
gene: CXADRP1
gene synonym: CAR; CXADRP
note: coxsackie virus and adenovirus receptor pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 15048262..15050713
location: region:15048262-15050713:1
so has part: feature:15048262-15050713:1:exon

653108
type: Gene
SIO_000068: ncbigene

HGNC:23770
type: HGNC
SIO_000068: hgnc

position:15048262:1
position: 15048262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15050713:1
position: 15050713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15048262-15050713:1:exon

LOC441956
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC441956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15051627..15053453)
location: region:15051627-15053453:-1
so has part: feature:15051627-15053453:-1:exon

441956
type: Gene
SIO_000068: ncbigene

position:15051627:-1
position: 15051627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15053453:-1
position: 15053453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15051627-15053453:-1:exon

LOC441956
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC441956
product: uncharacterized LOC441956
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 7% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_109656.2
SIO_010081: LOC441956
so part of: LOC441956
location: complement(15051627..15053453)
location: region:15051627-15053453:-1
so has part: feature:15051627-15053453:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15051627-15053453:-1:exon

LOC101927669
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC101927669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15095912..15097393
location: region:15095912-15097393:1
so has part: feature:15095912-15097393:1:exon

101927669
type: Gene
SIO_000068: ncbigene

position:15095912:1
position: 15095912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15097393:1
position: 15097393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15095912-15097393:1:exon

LOC101927669
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC101927669
product: uncharacterized LOC101927669
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_244292.1
SIO_010081: LOC101927669
so part of: LOC101927669
location: join(15095912..15096040,15096377..15096555,15097378..15097393)
location: region:15095912-15097393:1
so has part: feature:15095912-15096040:1:exon
so has part: feature:15096377-15096555:1:exon
so has part: feature:15097378-15097393:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15095912-15096040:1:exon

position:15096040:1
position: 15096040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15096377-15096555:1:exon

position:15096377:1
position: 15096377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15096555:1
position: 15096555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15097378-15097393:1:exon

position:15097378:1
position: 15097378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FEM1AP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: FEM1DP
gene: FEM1AP1
gene synonym: FEM1DP
note: fem-1 homolog a (C. elegans) pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 15134659..15136650
location: region:15134659-15136650:1
so has part: feature:15134659-15136650:1:exon

441957
type: Gene
SIO_000068: ncbigene

HGNC:17219
type: HGNC
SIO_000068: hgnc

position:15134659:1
position: 15134659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15136650:1
position: 15136650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15134659-15136650:1:exon

TERF1P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: TERF1P
gene: TERF1P1
gene synonym: TERF1P
note: telomeric repeat binding factor (NIMA-interacting) 1 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 15148407..15151133
location: region:15148407-15151133:1
so has part: feature:15148407-15151133:1:exon

348567
type: Gene
SIO_000068: ncbigene

HGNC:16733
type: HGNC
SIO_000068: hgnc

position:15148407:1
position: 15148407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15151133:1
position: 15151133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15148407-15151133:1:exon

TERF1P1
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
alternative label: TERF1P
gene: TERF1P1
gene synonym: TERF1P
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: TERF1P1
subclass of: SO_0000673
so part of: TERF1P1
location: 15148407..15151133
location: region:15148407-15151133:1
so has part: feature:15148407-15151133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15148407-15151133:1:exon

FAM207CP
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: FAM207CP
note: family with sequence similarity 207, member C; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 15164956..15165459
location: region:15164956-15165459:1
so has part: feature:15164956-15165459:1:exon

727987
type: Gene
SIO_000068: ncbigene

HGNC:42676
type: HGNC
SIO_000068: hgnc

position:15164956:1
position: 15164956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15165459:1
position: 15165459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15164956-15165459:1:exon

LOC654338
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC654338
note: brain cytoplasmic RNA 1 (non-protein coding) pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(15181878..15182080)
location: region:15181878-15182080:-1
so has part: feature:15181878-15182080:-1:exon

654338
type: Gene
SIO_000068: ncbigene

position:15181878:-1
position: 15181878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15182080:-1
position: 15182080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15181878-15182080:-1:exon

LOC654338
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC654338
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: LOC654338
subclass of: SO_0000673
so part of: LOC654338
location: complement(15181878..15182080)
location: region:15181878-15182080:-1
so has part: feature:15181878-15182080:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15181878-15182080:-1:exon

GXYLT1P2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: GXYLT1P2
note: glucoside xylosyltransferase 1 pseudogene 2; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(15195992..15197975)
location: region:15195992-15197975:-1
so has part: feature:15195992-15197975:-1:exon

441958
type: Gene
SIO_000068: ncbigene

HGNC:39677
type: HGNC
SIO_000068: hgnc

position:15195992:-1
position: 15195992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15197975:-1
position: 15197975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15195992-15197975:-1:exon

CNN2P7
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: CNN2P7
note: calponin 2 pseudogene 7; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 15199018..15199945
location: region:15199018-15199945:1
so has part: feature:15199018-15199945:1:exon

391266
type: Gene
SIO_000068: ncbigene

HGNC:39532
type: HGNC
SIO_000068: hgnc

position:15199018:1
position: 15199018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15199945:1
position: 15199945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15199018-15199945:1:exon

ZNF114P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: ZNF114P1
note: zinc finger protein 114 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 15211051..15212115
location: region:15211051-15212115:1
so has part: feature:15211051-15212115:1:exon

100132509
type: Gene
SIO_000068: ncbigene

HGNC:23771
type: HGNC
SIO_000068: hgnc

position:15211051:1
position: 15211051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15212115:1
position: 15212115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15211051-15212115:1:exon

C21orf15
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: C21orf15
note: chromosome 21 open reading frame 15; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(<15215454..15220685)
location: region:15215454-15220685:-1
so has part: feature:15215454-15220685:-1:exon

54094
type: Gene
SIO_000068: ncbigene

HGNC:1257
type: HGNC
SIO_000068: hgnc

position:15215454:-1
position: 15215454
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:15220685:-1
position: 15220685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15215454-15220685:-1:exon

C21orf15
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: C21orf15
product: chromosome 21 open reading frame 15
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_026755.1
SIO_010081: C21orf15
so part of: C21orf15
location: complement(join(<15215454..15215753,15216343..15216456,15217326..15217595,15218334..15218462,15219080..15219270,15220411..15220685))
location: region:15215454-15220685:-1
so has part: feature:15220411-15220685:-1:exon
so has part: feature:15219080-15219270:-1:exon
so has part: feature:15218334-15218462:-1:exon
so has part: feature:15217326-15217595:-1:exon
so has part: feature:15216343-15216456:-1:exon
so has part: feature:15215454-15215753:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15220411-15220685:-1:exon

position:15220411:-1
position: 15220411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15219080-15219270:-1:exon

position:15219080:-1
position: 15219080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15219270:-1
position: 15219270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15218334-15218462:-1:exon

position:15218334:-1
position: 15218334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15218462:-1
position: 15218462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15217326-15217595:-1:exon

position:15217326:-1
position: 15217326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15217595:-1
position: 15217595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15216343-15216456:-1:exon

position:15216343:-1
position: 15216343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15216456:-1
position: 15216456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15215454-15215753:-1:exon

position:15215753:-1
position: 15215753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CYP4F29P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: C21orf15
alternative label: CYP4F3LP
gene: CYP4F29P
gene synonym: C21orf15; CYP4F3LP
note: cytochrome P450, family 4, subfamily F, polypeptide 29, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(15218979..15220176)
location: region:15218979-15220176:-1
so has part: feature:15218979-15220176:-1:exon

54055
type: Gene
SIO_000068: ncbigene

HGNC:2647
type: HGNC
SIO_000068: hgnc

position:15218979:-1
position: 15218979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15220176:-1
position: 15220176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15218979-15220176:-1:exon

SNX18P13
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: SNX18P13
note: sorting nexin 18 pseudogene 13; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(15278059..15279641)
location: region:15278059-15279641:-1
so has part: feature:15278059-15279641:-1:exon

100419042
type: Gene
SIO_000068: ncbigene

HGNC:39621
type: HGNC
SIO_000068: hgnc

position:15278059:-1
position: 15278059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15279641:-1
position: 15279641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15278059-15279641:-1:exon

LOC100996622
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC100996622
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(15282752..15306238)
location: region:15282752-15306238:-1
so has part: feature:15282752-15306238:-1:exon

100996622
type: Gene
SIO_000068: ncbigene

position:15282752:-1
position: 15282752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15306238:-1
position: 15306238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15282752-15306238:-1:exon

LOC100996622
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC100996622
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
number: 8
pseudo: true
SIO_010081: LOC100996622
subclass of: SO_0000673
so part of: LOC100996622
location: complement(15282752..15282870)
location: region:15282752-15282870:-1
so has part: feature:15282752-15282870:-1:exon

position:15282870:-1
position: 15282870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15282752-15282870:-1:exon

LOC100996622
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC100996622
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
number: 7
pseudo: true
SIO_010081: LOC100996622
subclass of: SO_0000673
so part of: LOC100996622
location: complement(15284039..15284084)
location: region:15284039-15284084:-1
so has part: feature:15284039-15284084:-1:exon

position:15284039:-1
position: 15284039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15284084:-1
position: 15284084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15284039-15284084:-1:exon

LOC100996622
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC100996622
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
number: 6
pseudo: true
SIO_010081: LOC100996622
subclass of: SO_0000673
so part of: LOC100996622
location: complement(15287508..15287730)
location: region:15287508-15287730:-1
so has part: feature:15287508-15287730:-1:exon

position:15287508:-1
position: 15287508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15287730:-1
position: 15287730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15287508-15287730:-1:exon

LOC100996622
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC100996622
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
number: 5
pseudo: true
SIO_010081: LOC100996622
subclass of: SO_0000673
so part of: LOC100996622
location: complement(15289068..15289279)
location: region:15289068-15289279:-1
so has part: feature:15289068-15289279:-1:exon

position:15289068:-1
position: 15289068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15289279:-1
position: 15289279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15289068-15289279:-1:exon

LOC100996622
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC100996622
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
number: 4
pseudo: true
SIO_010081: LOC100996622
subclass of: SO_0000673
so part of: LOC100996622
location: complement(15289876..15290157)
location: region:15289876-15290157:-1
so has part: feature:15289876-15290157:-1:exon

position:15289876:-1
position: 15289876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15290157:-1
position: 15290157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15289876-15290157:-1:exon

LOC100996622
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC100996622
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
number: 3
pseudo: true
SIO_010081: LOC100996622
subclass of: SO_0000673
so part of: LOC100996622
location: complement(15297485..15297614)
location: region:15297485-15297614:-1
so has part: feature:15297485-15297614:-1:exon

position:15297485:-1
position: 15297485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15297614:-1
position: 15297614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15297485-15297614:-1:exon

LOC100996622
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC100996622
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
number: 2
pseudo: true
SIO_010081: LOC100996622
subclass of: SO_0000673
so part of: LOC100996622
location: complement(15304549..15304695)
location: region:15304549-15304695:-1
so has part: feature:15304549-15304695:-1:exon

position:15304549:-1
position: 15304549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15304695:-1
position: 15304695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15304549-15304695:-1:exon

LOC100996622
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC100996622
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
number: 1
pseudo: true
SIO_010081: LOC100996622
subclass of: SO_0000673
so part of: LOC100996622
location: complement(15306159..15306238)
location: region:15306159-15306238:-1
so has part: feature:15306159-15306238:-1:exon

position:15306159:-1
position: 15306159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15306159-15306238:-1:exon

RHOT1P2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: RHOT1P2
note: ras homolog family member T1 pseudogene 2; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(15309314..15309646)
location: region:15309314-15309646:-1
so has part: feature:15309314-15309646:-1:exon

100462811
type: Gene
SIO_000068: ncbigene

HGNC:37838
type: HGNC
SIO_000068: hgnc

position:15309314:-1
position: 15309314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15309646:-1
position: 15309646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15309314-15309646:-1:exon

ANKRD20A11P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: C21orf81
gene: ANKRD20A11P
gene synonym: C21orf81
note: ankyrin repeat domain 20 family, member A11, pseudogene; Derived by automated computational analysis using gene prediction method: BestRefSeq.
pseudo: true
so part of: sequence
location: complement(15316090..15352765)
location: region:15316090-15352765:-1
so has part: feature:15316090-15352765:-1:exon

391267
type: Gene
SIO_000068: ncbigene

HGNC:42024
type: HGNC
SIO_000068: hgnc

position:15316090:-1
position: 15316090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15352765:-1
position: 15352765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15316090-15352765:-1:exon

ANKRD20A11P
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf81
gene: ANKRD20A11P
gene synonym: C21orf81
product: ankyrin repeat domain 20 family, member A11, pseudogene
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
pseudo: true
transcript id: NR_027270.1
SIO_010081: ANKRD20A11P
so part of: ANKRD20A11P
location: complement(join(15316090..15316183,15317360..15317430,15323388..15323460,15323553..15323581,15326387..15326471,15352023..15352765))
location: region:15316090-15352765:-1
so has part: feature:15352023-15352765:-1:exon
so has part: feature:15326387-15326471:-1:exon
so has part: feature:15323553-15323581:-1:exon
so has part: feature:15323388-15323460:-1:exon
so has part: feature:15317360-15317430:-1:exon
so has part: feature:15316090-15316183:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15352023-15352765:-1:exon

position:15352023:-1
position: 15352023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15326387-15326471:-1:exon

position:15326387:-1
position: 15326387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15326471:-1
position: 15326471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15323553-15323581:-1:exon

position:15323553:-1
position: 15323553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15323581:-1
position: 15323581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15323388-15323460:-1:exon

position:15323388:-1
position: 15323388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15323460:-1
position: 15323460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15317360-15317430:-1:exon

position:15317360:-1
position: 15317360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15317430:-1
position: 15317430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15316090-15316183:-1:exon

position:15316183:-1
position: 15316183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NF1P3
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: NF1L1
gene: NF1P3
gene synonym: NF1L1
note: neurofibromin 1 pseudogene 3; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 15373246..15377600
location: region:15373246-15377600:1
so has part: feature:15373246-15377600:1:exon

4764
type: Gene
SIO_000068: ncbigene

HGNC:7766
type: HGNC
SIO_000068: hgnc

position:15373246:1
position: 15373246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15377600:1
position: 15377600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15373246-15377600:1:exon

PPP6R2P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: PPP6R2P1
note: protein phosphatase 6, regulatory subunit 2 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 15379456..15387163
location: region:15379456-15387163:1
so has part: feature:15379456-15387163:1:exon

100631381
type: Gene
SIO_000068: ncbigene

HGNC:39605
type: HGNC
SIO_000068: hgnc

position:15379456:1
position: 15379456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15387163:1
position: 15387163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15379456-15387163:1:exon

ANKRD20A18P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: C21orf126
gene: ANKRD20A18P
gene synonym: C21orf126
note: ankyrin repeat domain 20 family, member A18, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 15436540..15441409
location: region:15436540-15441409:1
so has part: feature:15436540-15441409:1:exon

391269
type: Gene
SIO_000068: ncbigene

HGNC:23756
type: HGNC
SIO_000068: hgnc

position:15436540:1
position: 15436540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15441409:1
position: 15441409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15436540-15441409:1:exon

RNA5SP488
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: RN5S488
gene: RNA5SP488
gene synonym: RN5S488
note: RNA, 5S ribosomal pseudogene 488; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 15443192..15443307
location: region:15443192-15443307:1
so has part: feature:15443192-15443307:1:exon

100873730
type: Gene
SIO_000068: ncbigene

HGNC:43388
type: HGNC
SIO_000068: hgnc

position:15443192:1
position: 15443192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15443307:1
position: 15443307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15443192-15443307:1:exon

ERLEC1P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: ERLEC1P1
note: endoplasmic reticulum lectin 1 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 15451295..15516788
location: region:15451295-15516788:1
so has part: feature:15451295-15516788:1:exon

100288870
type: Gene
SIO_000068: ncbigene

HGNC:38012
type: HGNC
SIO_000068: hgnc

position:15451295:1
position: 15451295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15516788:1
position: 15516788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15451295-15516788:1:exon

LIPI
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CT17
alternative label: LPDL
alternative label: PLA1C
alternative label: PRED5
gene: LIPI
gene synonym: CT17; LPDL; PLA1C; PRED5
note: lipase, member I; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(15480784..15583361)
location: region:15480784-15583361:-1
so has part: feature:15480784-15583361:-1:exon
subclass of: SO_0000010

149998
type: Gene
SIO_000068: ncbigene

HGNC:18821
type: HGNC
SIO_000068: hgnc

14193
type: HPRD
SIO_000068: hprd

609252
type: OMIM
SIO_000068: omim

position:15480784:-1
position: 15480784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15583361:-1
position: 15583361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15480784-15583361:-1:exon

LIPI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CT17
alternative label: LPDL
alternative label: PLA1C
alternative label: PRED5
gene: LIPI
gene synonym: CT17; LPDL; PLA1C; PRED5
product: lipase, member I, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005260924.1
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(15480784..15481401,15535740..15535844,15537544..15537711,15538683..15538772,15554079..15554180,15558282..15558390,15561355..15561740,15583121..15583361))
location: region:15480784-15583361:-1
so has part: feature:15583121-15583361:-1:exon
so has part: feature:15561355-15561740:-1:exon
so has part: feature:15558282-15558390:-1:exon
so has part: feature:15554079-15554180:-1:exon
so has part: feature:15538683-15538772:-1:exon
so has part: feature:15537544-15537711:-1:exon
so has part: feature:15535740-15535844:-1:exon
so has part: feature:15480784-15481401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15583121-15583361:-1:exon

position:15583121:-1
position: 15583121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15561355-15561740:-1:exon

position:15561355:-1
position: 15561355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15561740:-1
position: 15561740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15558282-15558390:-1:exon

position:15558282:-1
position: 15558282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15558390:-1
position: 15558390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15554079-15554180:-1:exon

position:15554079:-1
position: 15554079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15554180:-1
position: 15554180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15538683-15538772:-1:exon

position:15538683:-1
position: 15538683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15538772:-1
position: 15538772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15537544-15537711:-1:exon

position:15537544:-1
position: 15537544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15537711:-1
position: 15537711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:15535740-15535844:-1:exon

position:15535740:-1
position: 15535740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15535844:-1
position: 15535844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:15480784-15481401:-1:exon

position:15481401:-1
position: 15481401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LIPI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CT17
alternative label: LPDL
alternative label: PLA1C
alternative label: PRED5
gene: LIPI
gene synonym: CT17; LPDL; PLA1C; PRED5
product: lipase, member I, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005260922.1
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(15481134..15481401,15516944..15517120,15524894..15525005,15535740..15535844,15537544..15537711,15554079..15554180,15558282..15558390,15561355..15561740,15583121..15583361))
location: region:15481134-15583361:-1
so has part: feature:15583121-15583361:-1:exon
so has part: feature:15561355-15561740:-1:exon
so has part: feature:15558282-15558390:-1:exon
so has part: feature:15554079-15554180:-1:exon
so has part: feature:15537544-15537711:-1:exon
so has part: feature:15535740-15535844:-1:exon
so has part: feature:15524894-15525005:-1:exon
so has part: feature:15516944-15517120:-1:exon
so has part: feature:15481134-15481401:-1:exon

position:15481134:-1
position: 15481134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15583121-15583361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15561355-15561740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15558282-15558390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15554079-15554180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15537544-15537711:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15535740-15535844:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15524894-15525005:-1:exon

position:15524894:-1
position: 15524894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15525005:-1
position: 15525005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:15516944-15517120:-1:exon

position:15516944:-1
position: 15516944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15517120:-1
position: 15517120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:15481134-15481401:-1:exon

LIPI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CT17
alternative label: LPDL
alternative label: PLA1C
alternative label: PRED5
gene: LIPI
gene synonym: CT17; LPDL; PLA1C; PRED5
product: lipase, member I, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005260923.1
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(15481134..15481401,15516944..15517120,15524894..15525005,15535740..15535844,15537544..15537606,15538683..15538772,15554079..15554180,15558282..15558390,15561355..15561740,15583121..15583361))
location: region:15481134-15583361:-1
so has part: feature:15583121-15583361:-1:exon
so has part: feature:15561355-15561740:-1:exon
so has part: feature:15558282-15558390:-1:exon
so has part: feature:15554079-15554180:-1:exon
so has part: feature:15538683-15538772:-1:exon
so has part: feature:15537544-15537606:-1:exon
so has part: feature:15535740-15535844:-1:exon
so has part: feature:15524894-15525005:-1:exon
so has part: feature:15516944-15517120:-1:exon
so has part: feature:15481134-15481401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15583121-15583361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15561355-15561740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15558282-15558390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15554079-15554180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15538683-15538772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15537544-15537606:-1:exon

position:15537606:-1
position: 15537606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:15535740-15535844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15524894-15525005:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15516944-15517120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15481134-15481401:-1:exon

LIPI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CT17
alternative label: LPDL
alternative label: PLA1C
alternative label: PRED5
gene: LIPI
gene synonym: CT17; LPDL; PLA1C; PRED5
product: lipase, member I, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005260921.1
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(15481134..15481401,15516944..15517120,15524894..15525005,15535758..15535844,15537544..15537711,15538683..15538772,15554079..15554180,15558282..15558390,15561355..15561740,15583121..15583361))
location: region:15481134-15583361:-1
so has part: feature:15583121-15583361:-1:exon
so has part: feature:15561355-15561740:-1:exon
so has part: feature:15558282-15558390:-1:exon
so has part: feature:15554079-15554180:-1:exon
so has part: feature:15538683-15538772:-1:exon
so has part: feature:15537544-15537711:-1:exon
so has part: feature:15535758-15535844:-1:exon
so has part: feature:15524894-15525005:-1:exon
so has part: feature:15516944-15517120:-1:exon
so has part: feature:15481134-15481401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15583121-15583361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15561355-15561740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15558282-15558390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15554079-15554180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15538683-15538772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15537544-15537711:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15535758-15535844:-1:exon

position:15535758:-1
position: 15535758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:15524894-15525005:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15516944-15517120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15481134-15481401:-1:exon

LIPI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CT17
alternative label: LPDL
alternative label: PLA1C
alternative label: PRED5
gene: LIPI
gene synonym: CT17; LPDL; PLA1C; PRED5
product: lipase, member I, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005260920.1
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(15481134..15481401,15516944..15517120,15524894..15525005,15535740..15535844,15537544..15537711,15538683..15538772,15554079..15554180,15558282..15558390,15561355..15561740,15583121..15583361))
location: region:15481134-15583361:-1
so has part: feature:15583121-15583361:-1:exon
so has part: feature:15561355-15561740:-1:exon
so has part: feature:15558282-15558390:-1:exon
so has part: feature:15554079-15554180:-1:exon
so has part: feature:15538683-15538772:-1:exon
so has part: feature:15537544-15537711:-1:exon
so has part: feature:15535740-15535844:-1:exon
so has part: feature:15524894-15525005:-1:exon
so has part: feature:15516944-15517120:-1:exon
so has part: feature:15481134-15481401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15583121-15583361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15561355-15561740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15558282-15558390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15554079-15554180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15538683-15538772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15537544-15537711:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15535740-15535844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15524894-15525005:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15516944-15517120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15481134-15481401:-1:exon

LIPI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CT17
alternative label: LPDL
alternative label: PLA1C
alternative label: PRED5
gene: LIPI
gene synonym: CT17; LPDL; PLA1C; PRED5
product: lipase, member I
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_198996.2
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(15481134..15481401,15516944..15517120,15524894..15525005,15535740..15535844,15537544..15537711,15538683..15538772,15554079..15554180,15558282..15558390,15561355..15561740,15579136..15579254))
location: region:15481134-15579254:-1
so has part: feature:15579136-15579254:-1:exon
so has part: feature:15561355-15561740:-1:exon
so has part: feature:15558282-15558390:-1:exon
so has part: feature:15554079-15554180:-1:exon
so has part: feature:15538683-15538772:-1:exon
so has part: feature:15537544-15537711:-1:exon
so has part: feature:15535740-15535844:-1:exon
so has part: feature:15524894-15525005:-1:exon
so has part: feature:15516944-15517120:-1:exon
so has part: feature:15481134-15481401:-1:exon

position:15579254:-1
position: 15579254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15579136-15579254:-1:exon

position:15579136:-1
position: 15579136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15561355-15561740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15558282-15558390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15554079-15554180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15538683-15538772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15537544-15537711:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15535740-15535844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15524894-15525005:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15516944-15517120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15481134-15481401:-1:exon

LIPI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CT17
alternative label: LPDL
alternative label: PLA1C
alternative label: PRED5
gene: LIPI
gene synonym: CT17; LPDL; PLA1C; PRED5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member I isoform X5
translation: MILPKRNLNELRNFLFGELSAVFAFLRFQMRVYIFLCLMCWVRSDNKRPCLEFSQLSVKDSFRDLFIPRIETILMMYTRNNLNCAEPLFEQNNSLNVNFNTQKKTVWLIHGYRPVGSIPLWLQNFVRILLNEEDMNVIVVDWSRGATTFIYNRAVKNTRKVAVSLSVHIKNLLKHGASLDNFHFIGVSLGAHISGFVGKIFHGQLGRITGLDPAGPRFSRKPPYSRLDYTDAKFVDVIHSDSNGLGIQEPLGHIDFYPNGGNKQPGCPKSIFSGIQFIKCNHQRAVHLFMASLETNCNFISFPCRSYKDYKTSLCVDCDCFKEKSCPRLGYQAKLFKGVLKERMEGRPLRTTVFLDTSGTYPFCNHHFAGIILYLKTERKCFLIQTHVHQRTHKMPSSIKCTCL
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(15481280..15481401,15535740..15535844,15537544..15537711,15538683..15538772,15554079..15554180,15558282..15558390,15561355..15561740,15583121..15583253))
location: region:15481280-15583253:-1
so has part: feature:15583121-15583253:-1:exon
so has part: feature:15561355-15561740:-1:exon
so has part: feature:15558282-15558390:-1:exon
so has part: feature:15554079-15554180:-1:exon
so has part: feature:15538683-15538772:-1:exon
so has part: feature:15537544-15537711:-1:exon
so has part: feature:15535740-15535844:-1:exon
so has part: feature:15481280-15481401:-1:exon

XP_005260981.1
type: Protein
SIO_000068: ncbiprotein

position:15481280:-1
position: 15481280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15583253:-1
position: 15583253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15583121-15583253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15561355-15561740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15558282-15558390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15554079-15554180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15538683-15538772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15537544-15537711:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15535740-15535844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15481280-15481401:-1:exon

LIPI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CT17
alternative label: LPDL
alternative label: PLA1C
alternative label: PRED5
gene: LIPI
gene synonym: CT17; LPDL; PLA1C; PRED5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member I isoform X3
translation: MILPKRNLNELRNFLFGELSAVFAFLRFQMRVYIFLCLMCWVRSDNKRPCLEFSQLSVKDSFRDLFIPRIETILMMYTRNNLNCAEPLFEQNNSLNVNFNTQKKTVWLIHGYRPVGSIPLWLQNFVRILLNEEDMNVIVVDWSRGATTFIYNRAVKNTRKVAVSLSVHIKNLLKHGASLDNFHFIGVSLGAHISGFVGKIFHGQLGRITGLDPAGPRFSRKPPYSRLDYTDAKFVDVIHSDSNGIQFIKCNHQRAVHLFMASLETNCNFISFPCRSYKDYKTSLCVDCDCFKEKSCPRLGYQAKLFKGVLKERMEGRPLRTTVFLDTSGTYPFCTYYFVLSIIVPDKTMMDGSFSFKLLNQLGMIEEPRLYEKNKPFYKLQEVKILAQFYNDFVNISSIGLTYFQSSNLQCSTCTYKIQRLMLKSLTYPERPPLCRYNIVLKDREEVFLNPNTCTPKNT
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(15481314..15481401,15516944..15517120,15524894..15525005,15535740..15535844,15537544..15537711,15554079..15554180,15558282..15558390,15561355..15561740,15583121..15583253))
location: region:15481314-15583253:-1
so has part: feature:15583121-15583253:-1:exon
so has part: feature:15561355-15561740:-1:exon
so has part: feature:15558282-15558390:-1:exon
so has part: feature:15554079-15554180:-1:exon
so has part: feature:15537544-15537711:-1:exon
so has part: feature:15535740-15535844:-1:exon
so has part: feature:15524894-15525005:-1:exon
so has part: feature:15516944-15517120:-1:exon
so has part: feature:15481314-15481401:-1:exon

XP_005260979.1
type: Protein
SIO_000068: ncbiprotein

position:15481314:-1
position: 15481314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15583121-15583253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15561355-15561740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15558282-15558390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15554079-15554180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15537544-15537711:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15535740-15535844:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15524894-15525005:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15516944-15517120:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15481314-15481401:-1:exon

LIPI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CT17
alternative label: LPDL
alternative label: PLA1C
alternative label: PRED5
gene: LIPI
gene synonym: CT17; LPDL; PLA1C; PRED5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member I isoform X4
translation: MILPKRNLNELRNFLFGELSAVFAFLRFQMRVYIFLCLMCWVRSDNKRPCLEFSQLSVKDSFRDLFIPRIETILMMYTRNNLNCAEPLFEQNNSLNVNFNTQKKTVWLIHGYRPVGSIPLWLQNFVRILLNEEDMNVIVVDWSRGATTFIYNRAVKNTRKVAVSLSVHIKNLLKHGASLDNFHFIGVSLGAHISGFVGKIFHGQLGRITGLDPAGPRFSRKPPYSRLDYTDAKFVDVIHSDSNGLGIQEPLGHIDFYPNGGNKQPGCPKSIFSDYKTSLCVDCDCFKEKSCPRLGYQAKLFKGVLKERMEGRPLRTTVFLDTSGTYPFCTYYFVLSIIVPDKTMMDGSFSFKLLNQLGMIEEPRLYEKNKPFYKLQEVKILAQFYNDFVNISSIGLTYFQSSNLQCSTCTYKIQRLMLKSLTYPERPPLCRYNIVLKDREEVFLNPNTCTPKNT
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(15481314..15481401,15516944..15517120,15524894..15525005,15535740..15535844,15537544..15537606,15538683..15538772,15554079..15554180,15558282..15558390,15561355..15561740,15583121..15583253))
location: region:15481314-15583253:-1
so has part: feature:15583121-15583253:-1:exon
so has part: feature:15561355-15561740:-1:exon
so has part: feature:15558282-15558390:-1:exon
so has part: feature:15554079-15554180:-1:exon
so has part: feature:15538683-15538772:-1:exon
so has part: feature:15537544-15537606:-1:exon
so has part: feature:15535740-15535844:-1:exon
so has part: feature:15524894-15525005:-1:exon
so has part: feature:15516944-15517120:-1:exon
so has part: feature:15481314-15481401:-1:exon

XP_005260980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15583121-15583253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15561355-15561740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15558282-15558390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15554079-15554180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15538683-15538772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15537544-15537606:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15535740-15535844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15524894-15525005:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15516944-15517120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15481314-15481401:-1:exon

LIPI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CT17
alternative label: LPDL
alternative label: PLA1C
alternative label: PRED5
gene: LIPI
gene synonym: CT17; LPDL; PLA1C; PRED5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member I isoform X2
translation: MILPKRNLNELRNFLFGELSAVFAFLRFQMRVYIFLCLMCWVRSDNKRPCLEFSQLSVKDSFRDLFIPRIETILMMYTRNNLNCAEPLFEQNNSLNVNFNTQKKTVWLIHGYRPVGSIPLWLQNFVRILLNEEDMNVIVVDWSRGATTFIYNRAVKNTRKVAVSLSVHIKNLLKHGASLDNFHFIGVSLGAHISGFVGKIFHGQLGRITGLDPAGPRFSRKPPYSRLDYTDAKFVDVIHSDSNGLGIQEPLGHIDFYPNGGNKQPGCPKSIFSGIQFIKCNHQRAVHLFMASLETNCNFISFPCRSYKDYKTSLCVDCDCFKEKSCPRLGYQAKLFKGVLKERMEGRPLRTTVFLDTSAYYFVLSIIVPDKTMMDGSFSFKLLNQLGMIEEPRLYEKNKPFYKLQEVKILAQFYNDFVNISSIGLTYFQSSNLQCSTCTYKIQRLMLKSLTYPERPPLCRYNIVLKDREEVFLNPNTCTPKNT
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(15481314..15481401,15516944..15517120,15524894..15525005,15535758..15535844,15537544..15537711,15538683..15538772,15554079..15554180,15558282..15558390,15561355..15561740,15583121..15583253))
location: region:15481314-15583253:-1
so has part: feature:15583121-15583253:-1:exon
so has part: feature:15561355-15561740:-1:exon
so has part: feature:15558282-15558390:-1:exon
so has part: feature:15554079-15554180:-1:exon
so has part: feature:15538683-15538772:-1:exon
so has part: feature:15537544-15537711:-1:exon
so has part: feature:15535758-15535844:-1:exon
so has part: feature:15524894-15525005:-1:exon
so has part: feature:15516944-15517120:-1:exon
so has part: feature:15481314-15481401:-1:exon

XP_005260978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15583121-15583253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15561355-15561740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15558282-15558390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15554079-15554180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15538683-15538772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15537544-15537711:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15535758-15535844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15524894-15525005:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15516944-15517120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15481314-15481401:-1:exon

LIPI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CT17
alternative label: LPDL
alternative label: PLA1C
alternative label: PRED5
gene: LIPI
gene synonym: CT17; LPDL; PLA1C; PRED5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member I isoform X1
translation: MILPKRNLNELRNFLFGELSAVFAFLRFQMRVYIFLCLMCWVRSDNKRPCLEFSQLSVKDSFRDLFIPRIETILMMYTRNNLNCAEPLFEQNNSLNVNFNTQKKTVWLIHGYRPVGSIPLWLQNFVRILLNEEDMNVIVVDWSRGATTFIYNRAVKNTRKVAVSLSVHIKNLLKHGASLDNFHFIGVSLGAHISGFVGKIFHGQLGRITGLDPAGPRFSRKPPYSRLDYTDAKFVDVIHSDSNGLGIQEPLGHIDFYPNGGNKQPGCPKSIFSGIQFIKCNHQRAVHLFMASLETNCNFISFPCRSYKDYKTSLCVDCDCFKEKSCPRLGYQAKLFKGVLKERMEGRPLRTTVFLDTSGTYPFCTYYFVLSIIVPDKTMMDGSFSFKLLNQLGMIEEPRLYEKNKPFYKLQEVKILAQFYNDFVNISSIGLTYFQSSNLQCSTCTYKIQRLMLKSLTYPERPPLCRYNIVLKDREEVFLNPNTCTPKNT
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(15481314..15481401,15516944..15517120,15524894..15525005,15535740..15535844,15537544..15537711,15538683..15538772,15554079..15554180,15558282..15558390,15561355..15561740,15583121..15583253))
location: region:15481314-15583253:-1
so has part: feature:15583121-15583253:-1:exon
so has part: feature:15561355-15561740:-1:exon
so has part: feature:15558282-15558390:-1:exon
so has part: feature:15554079-15554180:-1:exon
so has part: feature:15538683-15538772:-1:exon
so has part: feature:15537544-15537711:-1:exon
so has part: feature:15535740-15535844:-1:exon
so has part: feature:15524894-15525005:-1:exon
so has part: feature:15516944-15517120:-1:exon
so has part: feature:15481314-15481401:-1:exon

XP_005260977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15583121-15583253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15561355-15561740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15558282-15558390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15554079-15554180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15538683-15538772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15537544-15537711:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15535740-15535844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15524894-15525005:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15516944-15517120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15481314-15481401:-1:exon

LIPI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CT17
alternative label: LPDL
alternative label: PLA1C
alternative label: PRED5
gene: LIPI
gene synonym: CT17; LPDL; PLA1C; PRED5
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: lipase member I
translation: MLLKCLHNNLCQKYSAHAFQFSPRNVLWLLVVCLRSDNKRPCLEFSQLSVKDSFRDLFIPRIETILMMYTRNNLNCAEPLFEQNNSLNVNFNTQKKTVWLIHGYRPVGSIPLWLQNFVRILLNEEDMNVIVVDWSRGATTFIYNRAVKNTRKVAVSLSVHIKNLLKHGASLDNFHFIGVSLGAHISGFVGKIFHGQLGRITGLDPAGPRFSRKPPYSRLDYTDAKFVDVIHSDSNGLGIQEPLGHIDFYPNGGNKQPGCPKSIFSGIQFIKCNHQRAVHLFMASLETNCNFISFPCRSYKDYKTSLCVDCDCFKEKSCPRLGYQAKLFKGVLKERMEGRPLRTTVFLDTSGTYPFCTYYFVLSIIVPDKTMMDGSFSFKLLNQLGMIEEPRLYEKNKPFYKLQEVKILAQFYNDFVNISSIGLTYFQSSNLQCSTCTYKIQRLMLKSLTYPERPPLCRYNIVLKDREEVFLNPNTCTPKNT
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(15481314..15481401,15516944..15517120,15524894..15525005,15535740..15535844,15537544..15537711,15538683..15538772,15554079..15554180,15558282..15558390,15561355..15561740,15579136..15579244))
location: region:15481314-15579244:-1
so has part: feature:15579136-15579244:-1:exon
so has part: feature:15561355-15561740:-1:exon
so has part: feature:15558282-15558390:-1:exon
so has part: feature:15554079-15554180:-1:exon
so has part: feature:15538683-15538772:-1:exon
so has part: feature:15537544-15537711:-1:exon
so has part: feature:15535740-15535844:-1:exon
so has part: feature:15524894-15525005:-1:exon
so has part: feature:15516944-15517120:-1:exon
so has part: feature:15481314-15481401:-1:exon

NP_945347.1
type: Protein
SIO_000068: ncbiprotein

CCDS13564.1
type: CCDS
SIO_000068: ccds

position:15579244:-1
position: 15579244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15579136-15579244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15561355-15561740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15558282-15558390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15554079-15554180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15538683-15538772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15537544-15537711:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15535740-15535844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15524894-15525005:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15516944-15517120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15481314-15481401:-1:exon

RBM11
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: RBM11
note: RNA binding motif protein 11; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 15588466..15600693
location: region:15588466-15600693:1
so has part: feature:15588466-15600693:1:exon
subclass of: SO_0000010

54033
type: Gene
SIO_000068: ncbigene

HGNC:9897
type: HGNC
SIO_000068: hgnc

position:15588466:1
position: 15588466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15600693:1
position: 15600693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15588466-15600693:1:exon

RBM11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
gene: RBM11
product: RNA binding motif protein 11
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_144770.3
SIO_010081: RBM11
subclass of: SO_0000673
so part of: RBM11
location: join(15588466..15588603,15591884..15592046,15593418..15593490,15596759..15596858,15599201..15600693)
location: region:15588466-15600693:1
so has part: feature:15588466-15588603:1:exon
so has part: feature:15591884-15592046:1:exon
so has part: feature:15593418-15593490:1:exon
so has part: feature:15596759-15596858:1:exon
so has part: feature:15599201-15600693:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15588466-15588603:1:exon

position:15588603:1
position: 15588603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15591884-15592046:1:exon

position:15591884:1
position: 15591884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15592046:1
position: 15592046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15593418-15593490:1:exon

position:15593418:1
position: 15593418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15593490:1
position: 15593490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15596759-15596858:1:exon

position:15596759:1
position: 15596759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15596858:1
position: 15596858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15599201-15600693:1:exon

position:15599201:1
position: 15599201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBM11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
gene: RBM11
product: RNA binding motif protein 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005260997.1
SIO_010081: RBM11
subclass of: SO_0000673
so part of: RBM11
location: join(15588472..15588603,15591884..15592046,15593418..15593490,15596759..15596858,15599180..15599245,15599372..15600686)
location: region:15588472-15600686:1
so has part: feature:15588472-15588603:1:exon
so has part: feature:15591884-15592046:1:exon
so has part: feature:15593418-15593490:1:exon
so has part: feature:15596759-15596858:1:exon
so has part: feature:15599180-15599245:1:exon
so has part: feature:15599372-15600686:1:exon

position:15588472:1
position: 15588472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15600686:1
position: 15600686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15588472-15588603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15591884-15592046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15593418-15593490:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15596759-15596858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15599180-15599245:1:exon

position:15599180:1
position: 15599180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15599245:1
position: 15599245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15599372-15600686:1:exon

position:15599372:1
position: 15599372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBM11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
gene: RBM11
product: RNA binding motif protein 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005260996.1
SIO_010081: RBM11
subclass of: SO_0000673
so part of: RBM11
location: join(15588472..15588603,15591884..15592046,15593418..15593490,15596759..15596858,15599180..15600684)
location: region:15588472-15600684:1
so has part: feature:15588472-15588603:1:exon
so has part: feature:15591884-15592046:1:exon
so has part: feature:15593418-15593490:1:exon
so has part: feature:15596759-15596858:1:exon
so has part: feature:15599180-15600684:1:exon

position:15600684:1
position: 15600684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15588472-15588603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15591884-15592046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15593418-15593490:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15596759-15596858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15599180-15600684:1:exon

RBM11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
gene: RBM11
product: RNA binding motif protein 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005260998.1
SIO_010081: RBM11
subclass of: SO_0000673
so part of: RBM11
location: join(15588479..15588603,15591874..15592046,15593418..15593490,15596759..15596858,15599201..15600683)
location: region:15588479-15600683:1
so has part: feature:15588479-15588603:1:exon
so has part: feature:15591874-15592046:1:exon
so has part: feature:15593418-15593490:1:exon
so has part: feature:15596759-15596858:1:exon
so has part: feature:15599201-15600683:1:exon

position:15588479:1
position: 15588479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15600683:1
position: 15600683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15588479-15588603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15591874-15592046:1:exon

position:15591874:1
position: 15591874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15593418-15593490:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15596759-15596858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15599201-15600683:1:exon

RBM11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
gene: RBM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing regulator RBM11 isoform X1
translation: MFPAQEEADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIALLNGIRLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHNYRNEEMLVGRSSFPMQYFPINNTSLPQEYFLFQKMMNVLFSQQWHVYNPVLQLPYYEMTAPLPNSASVSSSLNHVPDLEAGPSSYKWTHQQPSDSDLYQMTAPLPNSASVSSSLNHVPDLEAGPSSYKWTHQQPSDSDLYQMNKRKRQKQTSDSDSSTDNNRGNECSQKFRKSKKKKRY
SIO_010081: RBM11
subclass of: SO_0000673
so part of: RBM11
location: join(15588508..15588603,15591884..15592046,15593418..15593490,15596759..15596858,15599180..15599614)
location: region:15588508-15599614:1
so has part: feature:15588508-15588603:1:exon
so has part: feature:15591884-15592046:1:exon
so has part: feature:15593418-15593490:1:exon
so has part: feature:15596759-15596858:1:exon
so has part: feature:15599180-15599614:1:exon

XP_005261053.1
type: Protein
SIO_000068: ncbiprotein

position:15588508:1
position: 15588508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15599614:1
position: 15599614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15588508-15588603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15591884-15592046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15593418-15593490:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15596759-15596858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15599180-15599614:1:exon

RBM11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
gene: RBM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing regulator RBM11 isoform X2
translation: MFPAQEEADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIALLNGIRLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHNYRNEEMLVGRSSFPMQYFPINNTSLPQEYFLFQKMMNVLFSQQWHVYNPVLQLPYYEMTAPLPNSASVSSSLNHVPDLEAGPSSYKWTHQQPSDSDLYQMNKRKRQKQTSDSDSSTDNNRGNECSQKFRKSKKKKRY
SIO_010081: RBM11
subclass of: SO_0000673
so part of: RBM11
location: join(15588508..15588603,15591884..15592046,15593418..15593490,15596759..15596858,15599180..15599245,15599372..15599614)
location: region:15588508-15599614:1
so has part: feature:15588508-15588603:1:exon
so has part: feature:15591884-15592046:1:exon
so has part: feature:15593418-15593490:1:exon
so has part: feature:15596759-15596858:1:exon
so has part: feature:15599180-15599245:1:exon
so has part: feature:15599372-15599614:1:exon

XP_005261054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15588508-15588603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15591884-15592046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15593418-15593490:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15596759-15596858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15599180-15599245:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15599372-15599614:1:exon

RBM11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
gene: RBM11
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: splicing regulator RBM11
translation: MFPAQEEADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIALLNGIRLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHNYRNEEMLVGRSSFPMQYFPINNTSLPQEYFLFQKMQWHVYNPVLQLPYYEMTAPLPNSASVSSSLNHVPDLEAGPSSYKWTHQQPSDSDLYQMTAPLPNSASVSSSLNHVPDLEAGPSSYKWTHQQPSDSDLYQMNKRKRQKQTSDSDSSTDNNRGNECSQKFRKSKKKKRY
SIO_010081: RBM11
subclass of: SO_0000673
so part of: RBM11
location: join(15588508..15588603,15591884..15592046,15593418..15593490,15596759..15596858,15599201..15599614)
location: region:15588508-15599614:1
so has part: feature:15588508-15588603:1:exon
so has part: feature:15591884-15592046:1:exon
so has part: feature:15593418-15593490:1:exon
so has part: feature:15596759-15596858:1:exon
so has part: feature:15599201-15599614:1:exon

NP_658983.3
type: Protein
SIO_000068: ncbiprotein

CCDS46635.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:15588508-15588603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15591884-15592046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15593418-15593490:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15596759-15596858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15599201-15599614:1:exon

RBM11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
gene: RBM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing regulator RBM11 isoform X3
translation: MLVGRSSFPMQYFPINNTSLPQEYFLFQKMQWHVYNPVLQLPYYEMTAPLPNSASVSSSLNHVPDLEAGPSSYKWTHQQPSDSDLYQMTAPLPNSASVSSSLNHVPDLEAGPSSYKWTHQQPSDSDLYQMNKRKRQKQTSDSDSSTDNNRGNECSQKFRKSKKKKRY
SIO_010081: RBM11
subclass of: SO_0000673
so part of: RBM11
location: join(15596769..15596858,15599201..15599614)
location: region:15596769-15599614:1
so has part: feature:15596769-15596858:1:exon
so has part: feature:15599201-15599614:1:exon

XP_005261055.1
type: Protein
SIO_000068: ncbiprotein

position:15596769:1
position: 15596769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15596769-15596858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15599201-15599614:1:exon

ABCC13
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: C21orf73
alternative label: PRED6
gene: ABCC13
gene synonym: C21orf73; PRED6
note: ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene; Derived by automated computational analysis using gene prediction method: BestRefSeq.
pseudo: true
so part of: sequence
location: 15646120..15673707
location: region:15646120-15673707:1
so has part: feature:15646120-15673707:1:exon

150000
type: Gene
SIO_000068: ncbigene

HGNC:16022
type: HGNC
SIO_000068: hgnc

608835
type: OMIM
SIO_000068: omim

position:15646120:1
position: 15646120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15673707:1
position: 15673707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15646120-15673707:1:exon

ABCC13
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf73
alternative label: PRED6
gene: ABCC13
gene synonym: C21orf73; PRED6
product: ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene, transcript variant A
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
pseudo: true
transcript id: NR_003087.1
SIO_010081: ABCC13
so part of: ABCC13
location: join(15646120..15646478,15651917..15651978,15659871..15660018,15660725..15660867,15663891..15664068,15671759..15673707)
location: region:15646120-15673707:1
so has part: feature:15646120-15646478:1:exon
so has part: feature:15651917-15651978:1:exon
so has part: feature:15659871-15660018:1:exon
so has part: feature:15660725-15660867:1:exon
so has part: feature:15663891-15664068:1:exon
so has part: feature:15671759-15673707:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15646120-15646478:1:exon

position:15646478:1
position: 15646478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15651917-15651978:1:exon

position:15651917:1
position: 15651917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15651978:1
position: 15651978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15659871-15660018:1:exon

position:15659871:1
position: 15659871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15660018:1
position: 15660018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15660725-15660867:1:exon

position:15660725:1
position: 15660725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15660867:1
position: 15660867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15663891-15664068:1:exon

position:15663891:1
position: 15663891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15664068:1
position: 15664068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15671759-15673707:1:exon

position:15671759:1
position: 15671759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ABCC13
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf73
alternative label: PRED6
gene: ABCC13
gene synonym: C21orf73; PRED6
product: ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene, transcript variant D
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
pseudo: true
transcript id: NR_003088.1
SIO_010081: ABCC13
so part of: ABCC13
location: join(15646120..15646478,15651917..15651978,15659871..15660018,15660725..15660867,15663607..15663720)
location: region:15646120-15663720:1
so has part: feature:15646120-15646478:1:exon
so has part: feature:15651917-15651978:1:exon
so has part: feature:15659871-15660018:1:exon
so has part: feature:15660725-15660867:1:exon
so has part: feature:15663607-15663720:1:exon

position:15663720:1
position: 15663720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15646120-15646478:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15651917-15651978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15659871-15660018:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15660725-15660867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15663607-15663720:1:exon

position:15663607:1
position: 15663607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HSPA13
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: STCH
gene: HSPA13
gene synonym: STCH
note: heat shock protein 70kDa family, member 13; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(15743436..15755509)
location: region:15743436-15755509:-1
so has part: feature:15743436-15755509:-1:exon
subclass of: SO_0000010

6782
type: Gene
SIO_000068: ncbigene

HGNC:11375
type: HGNC
SIO_000068: hgnc

601100
type: OMIM
SIO_000068: omim

position:15743436:-1
position: 15743436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15755509:-1
position: 15755509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15743436-15755509:-1:exon

HSPA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: STCH
gene: HSPA13
gene synonym: STCH
product: heat shock protein 70kDa family, member 13
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_006948.4
SIO_010081: HSPA13
subclass of: SO_0000673
so part of: HSPA13
location: complement(join(15743436..15746605,15747973..15748140,15750520..15750733,15753524..15753864,15755416..15755509))
location: region:15743436-15755509:-1
so has part: feature:15755416-15755509:-1:exon
so has part: feature:15753524-15753864:-1:exon
so has part: feature:15750520-15750733:-1:exon
so has part: feature:15747973-15748140:-1:exon
so has part: feature:15743436-15746605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15755416-15755509:-1:exon

position:15755416:-1
position: 15755416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15753524-15753864:-1:exon

position:15753524:-1
position: 15753524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15753864:-1
position: 15753864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15750520-15750733:-1:exon

position:15750520:-1
position: 15750520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15750733:-1
position: 15750733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15747973-15748140:-1:exon

position:15747973:-1
position: 15747973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15748140:-1
position: 15748140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15743436-15746605:-1:exon

position:15746605:-1
position: 15746605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSPA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: STCH
gene: HSPA13
gene synonym: STCH
product: heat shock protein 70kDa family, member 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 33 ESTs, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005261036.1
SIO_010081: HSPA13
subclass of: SO_0000673
so part of: HSPA13
location: complement(join(15743436..15746605,15747973..15748140,15753524..15753864,15755416..15755456))
location: region:15743436-15755456:-1
so has part: feature:15755416-15755456:-1:exon
so has part: feature:15753524-15753864:-1:exon
so has part: feature:15747973-15748140:-1:exon
so has part: feature:15743436-15746605:-1:exon

position:15755456:-1
position: 15755456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15755416-15755456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15753524-15753864:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15747973-15748140:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15743436-15746605:-1:exon

HSPA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: STCH
gene: HSPA13
gene synonym: STCH
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: heat shock 70 kDa protein 13 precursor
translation: MAREMTILGSAVLTLLLAGYLAQQYLPLPTPKVIGIDLGTTYCSVGVFFPGTGKVKVIPDENGHISIPSMVSFTDNDVYVGYESVELADSNPQNTIYDAKRFIGKIFTAEELEAEIGRYPFKVLNKNGMVEFSVTSNETITVSPEYVGSRLLLKLKEMAEAYLGMPVANAVISVPAEFDLKQRNSTIEAANLAGLKILRVINEPTAAAMAYGLHKADVFHVLVIDLGGGTLDVSLLNKQGGMFLTRAMSGNNKLGGQDFNQRLLQYLYKQIYQTYGFVPSRKEEIHRLRQAVEMVKLNLTLHQSAQLSVLLTVEEQDRKEPHSSDTELPKDKLSSADDHRVNSGFGRGLSDKKSGESQVLFETEISRKLFDTLNEDLFQKILVPIQQVLKEGHLEKTEIDEVVLVGGSTRIPRIRQVIQEFFGKDPNTSVDPDLAVVTGVAIQAGIDGGSWPLQVSALEIPNKHLQKTNFN
SIO_010081: HSPA13
subclass of: SO_0000673
so part of: HSPA13
location: complement(join(15745938..15746605,15747973..15748140,15750520..15750733,15753524..15753864,15755416..15755440))
location: region:15745938-15755440:-1
so has part: feature:15755416-15755440:-1:exon
so has part: feature:15753524-15753864:-1:exon
so has part: feature:15750520-15750733:-1:exon
so has part: feature:15747973-15748140:-1:exon
so has part: feature:15745938-15746605:-1:exon

NP_008879.3
type: Protein
SIO_000068: ncbiprotein

CCDS13567.1
type: CCDS
SIO_000068: ccds

position:15745938:-1
position: 15745938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15755440:-1
position: 15755440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15755416-15755440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15753524-15753864:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15750520-15750733:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15747973-15748140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15745938-15746605:-1:exon

HSPA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: STCH
gene: HSPA13
gene synonym: STCH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 13 isoform X1
translation: MAYGLHKADVFHVLVIDLGGGTLDVSLLNKQGGMFLTRAMSGNNKLGGQDFNQRLLQYLYKQIYQTYGFVPSRKEEIHRLRQAVEMVKLNLTLHQSAQLSVLLTVEEQDRKEPHSSDTELPKDKLSSADDHRVNSGFGRGLSDKKSGESQVLFETEISRKLFDTLNEDLFQKILVPIQQVLKEGHLEKTEIDEVVLVGGSTRIPRIRQVIQEFFGKDPNTSVDPDLAVVTGVAIQAGIDGGSWPLQVSALEIPNKHLQKTNFN
SIO_010081: HSPA13
subclass of: SO_0000673
so part of: HSPA13
location: complement(join(15745938..15746605,15747973..15748096))
location: region:15745938-15748096:-1
so has part: feature:15747973-15748096:-1:exon
so has part: feature:15745938-15746605:-1:exon

XP_005261093.1
type: Protein
SIO_000068: ncbiprotein

position:15748096:-1
position: 15748096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15747973-15748096:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15745938-15746605:-1:exon

SAMSN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: HACS1
alternative label: NASH1
alternative label: SASH2
alternative label: SH3D6B
alternative label: SLy2
gene: SAMSN1
gene synonym: HACS1; NASH1; SASH2; SH3D6B; SLy2
note: SAM domain, SH3 domain and nuclear localization signals 1; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(15857549..15955723)
location: region:15857549-15955723:-1
so has part: feature:15857549-15955723:-1:exon
subclass of: SO_0000010

64092
type: Gene
SIO_000068: ncbigene

HGNC:10528
type: HGNC
SIO_000068: hgnc

607978
type: OMIM
SIO_000068: omim

position:15857549:-1
position: 15857549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15955723:-1
position: 15955723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15857549-15955723:-1:exon

SAMSN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HACS1
alternative label: NASH1
alternative label: SASH2
alternative label: SH3D6B
alternative label: SLy2
gene: SAMSN1
gene synonym: HACS1; NASH1; SASH2; SH3D6B; SLy2
product: SAM domain, SH3 domain and nuclear localization signals 1, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001256370.1
SIO_010081: SAMSN1
subclass of: SO_0000673
so part of: SAMSN1
location: complement(join(15857549..15858435,15870763..15870913,15872850..15873056,15882631..15882782,15884765..15884894,15889213..15889362,15893471..15893542,15954457..15954809,15955641..15955723))
location: region:15857549-15955723:-1
so has part: feature:15955641-15955723:-1:exon
so has part: feature:15954457-15954809:-1:exon
so has part: feature:15893471-15893542:-1:exon
so has part: feature:15889213-15889362:-1:exon
so has part: feature:15884765-15884894:-1:exon
so has part: feature:15882631-15882782:-1:exon
so has part: feature:15872850-15873056:-1:exon
so has part: feature:15870763-15870913:-1:exon
so has part: feature:15857549-15858435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15955641-15955723:-1:exon

position:15955641:-1
position: 15955641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15954457-15954809:-1:exon

position:15954457:-1
position: 15954457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15954809:-1
position: 15954809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15893471-15893542:-1:exon

position:15893471:-1
position: 15893471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15893542:-1
position: 15893542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15889213-15889362:-1:exon

position:15889213:-1
position: 15889213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15889362:-1
position: 15889362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15884765-15884894:-1:exon

position:15884765:-1
position: 15884765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15884894:-1
position: 15884894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15882631-15882782:-1:exon

position:15882631:-1
position: 15882631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15882782:-1
position: 15882782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:15872850-15873056:-1:exon

position:15872850:-1
position: 15872850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15873056:-1
position: 15873056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:15870763-15870913:-1:exon

position:15870763:-1
position: 15870763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15870913:-1
position: 15870913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:15857549-15858435:-1:exon

position:15858435:-1
position: 15858435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SAMSN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HACS1
alternative label: NASH1
alternative label: SASH2
alternative label: SH3D6B
alternative label: SLy2
gene: SAMSN1
gene synonym: HACS1; NASH1; SASH2; SH3D6B; SLy2
product: SAM domain, SH3 domain and nuclear localization signals 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005261022.1
SIO_010081: SAMSN1
subclass of: SO_0000673
so part of: SAMSN1
location: complement(join(15857549..15858435,15870763..15870913,15872850..15873056,15918526..15918681))
location: region:15857549-15918681:-1
so has part: feature:15918526-15918681:-1:exon
so has part: feature:15872850-15873056:-1:exon
so has part: feature:15870763-15870913:-1:exon
so has part: feature:15857549-15858435:-1:exon

position:15918681:-1
position: 15918681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15918526-15918681:-1:exon

position:15918526:-1
position: 15918526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15872850-15873056:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15870763-15870913:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15857549-15858435:-1:exon

SAMSN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HACS1
alternative label: NASH1
alternative label: SASH2
alternative label: SH3D6B
alternative label: SLy2
gene: SAMSN1
gene synonym: HACS1; NASH1; SASH2; SH3D6B; SLy2
product: SAM domain, SH3 domain and nuclear localization signals 1, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_022136.4
SIO_010081: SAMSN1
subclass of: SO_0000673
so part of: SAMSN1
location: complement(join(15857549..15858435,15870763..15870913,15872850..15873056,15882631..15882782,15884765..15884894,15889213..15889362,15893471..15893542,15918526..15918681))
location: region:15857549-15918681:-1
so has part: feature:15918526-15918681:-1:exon
so has part: feature:15893471-15893542:-1:exon
so has part: feature:15889213-15889362:-1:exon
so has part: feature:15884765-15884894:-1:exon
so has part: feature:15882631-15882782:-1:exon
so has part: feature:15872850-15873056:-1:exon
so has part: feature:15870763-15870913:-1:exon
so has part: feature:15857549-15858435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15918526-15918681:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15893471-15893542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15889213-15889362:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15884765-15884894:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15882631-15882782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15872850-15873056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15870763-15870913:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15857549-15858435:-1:exon

SAMSN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HACS1
alternative label: NASH1
alternative label: SASH2
alternative label: SH3D6B
alternative label: SLy2
gene: SAMSN1
gene synonym: HACS1; NASH1; SASH2; SH3D6B; SLy2
note: isoform 2 is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: SAM domain-containing protein SAMSN-1 isoform 2
translation: MEIRLDTLSASLGRSSTLNNCNLEDKLAWYEGEAYMWHHWKPFPENPLWTCLDFQIAQVGPWDHCSSCIRHTRLKSSCSDMDLLHSWRSSSFGNFDRFRNNSLSKPDDSTEAHEGDPTNGSGEQSKTSNNGGGLGKKMRAISWTMKKKVGKKYIKALSEEKDEEDGENAHPYRNSDPVIGTHTEKVSLKASDSMDSLYSGQSSSSGITSCSDGTSNRDSFRLDDDGPYSGPFCGRARVHTDFTPSPYDTDSLKIKKGDIIDIICKTPMGMWTGMLNNKVGNFKFIYVDVISEEEAAPKKIKANRRSNSKKSKTLQEFLERIHLQEYTSTLLLNGYETLEDLKDIKESHLIELNIENPDDRRRLLSAAENFLEEEIIQEQENEPEPLSLSSDISLNKSQLDDCPRDSGCYISSGNSDNGKEDLESENLSDMVHKIIITEPSD
SIO_010081: SAMSN1
subclass of: SO_0000673
so part of: SAMSN1
location: complement(join(15858233..15858435,15870763..15870913,15872850..15873056,15882631..15882782,15884765..15884894,15889213..15889362,15893471..15893542,15954457..15954717))
location: region:15858233-15954717:-1
so has part: feature:15954457-15954717:-1:exon
so has part: feature:15893471-15893542:-1:exon
so has part: feature:15889213-15889362:-1:exon
so has part: feature:15884765-15884894:-1:exon
so has part: feature:15882631-15882782:-1:exon
so has part: feature:15872850-15873056:-1:exon
so has part: feature:15870763-15870913:-1:exon
so has part: feature:15858233-15858435:-1:exon

NP_001243299.1
type: Protein
SIO_000068: ncbiprotein

CCDS58786.1
type: CCDS
SIO_000068: ccds

position:15858233:-1
position: 15858233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15954717:-1
position: 15954717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15954457-15954717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15893471-15893542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15889213-15889362:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15884765-15884894:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15882631-15882782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15872850-15873056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15870763-15870913:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15858233-15858435:-1:exon

SAMSN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HACS1
alternative label: NASH1
alternative label: SASH2
alternative label: SH3D6B
alternative label: SLy2
gene: SAMSN1
gene synonym: HACS1; NASH1; SASH2; SH3D6B; SLy2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SAM domain-containing protein SAMSN-1 isoform X1
translation: MLKRKPSNVSEKEKHQKPKKGDIIDIICKTPMGMWTGMLNNKVGNFKFIYVDVISEEEAAPKKIKANRRSNSKKSKTLQEFLERIHLQEYTSTLLLNGYETLEDLKDIKESHLIELNIENPDDRRRLLSAAENFLEEEIIQEQENEPEPLSLSSDISLNKSQLDDCPRDSGCYISSGNSDNGKEDLESENLSDMVHKIIITEPSD
SIO_010081: SAMSN1
subclass of: SO_0000673
so part of: SAMSN1
location: complement(join(15858233..15858435,15870763..15870913,15872850..15873056,15918526..15918582))
location: region:15858233-15918582:-1
so has part: feature:15918526-15918582:-1:exon
so has part: feature:15872850-15873056:-1:exon
so has part: feature:15870763-15870913:-1:exon
so has part: feature:15858233-15858435:-1:exon

XP_005261079.1
type: Protein
SIO_000068: ncbiprotein

position:15918582:-1
position: 15918582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15918526-15918582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15872850-15873056:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15870763-15870913:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15858233-15858435:-1:exon

SAMSN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HACS1
alternative label: NASH1
alternative label: SASH2
alternative label: SH3D6B
alternative label: SLy2
gene: SAMSN1
gene synonym: HACS1; NASH1; SASH2; SH3D6B; SLy2
note: isoform 1 is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: SAM domain-containing protein SAMSN-1 isoform 1
translation: MLKRKPSNVSEKEKHQKPKRSSSFGNFDRFRNNSLSKPDDSTEAHEGDPTNGSGEQSKTSNNGGGLGKKMRAISWTMKKKVGKKYIKALSEEKDEEDGENAHPYRNSDPVIGTHTEKVSLKASDSMDSLYSGQSSSSGITSCSDGTSNRDSFRLDDDGPYSGPFCGRARVHTDFTPSPYDTDSLKIKKGDIIDIICKTPMGMWTGMLNNKVGNFKFIYVDVISEEEAAPKKIKANRRSNSKKSKTLQEFLERIHLQEYTSTLLLNGYETLEDLKDIKESHLIELNIENPDDRRRLLSAAENFLEEEIIQEQENEPEPLSLSSDISLNKSQLDDCPRDSGCYISSGNSDNGKEDLESENLSDMVHKIIITEPSD
SIO_010081: SAMSN1
subclass of: SO_0000673
so part of: SAMSN1
location: complement(join(15858233..15858435,15870763..15870913,15872850..15873056,15882631..15882782,15884765..15884894,15889213..15889362,15893471..15893542,15918526..15918582))
location: region:15858233-15918582:-1
so has part: feature:15918526-15918582:-1:exon
so has part: feature:15893471-15893542:-1:exon
so has part: feature:15889213-15889362:-1:exon
so has part: feature:15884765-15884894:-1:exon
so has part: feature:15882631-15882782:-1:exon
so has part: feature:15872850-15873056:-1:exon
so has part: feature:15870763-15870913:-1:exon
so has part: feature:15858233-15858435:-1:exon

NP_071419.3
type: Protein
SIO_000068: ncbiprotein

CCDS42906.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:15918526-15918582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15893471-15893542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15889213-15889362:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15884765-15884894:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15882631-15882782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15872850-15873056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15870763-15870913:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15858233-15858435:-1:exon

SAMSN1-AS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: SAMSN1-AS1
note: SAMSN1 antisense RNA 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 15954523..15970624
location: region:15954523-15970624:1
so has part: feature:15954523-15970624:1:exon

100874190
type: Gene
SIO_000068: ncbigene

HGNC:39599
type: HGNC
SIO_000068: hgnc

position:15954523:1
position: 15954523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15970624:1
position: 15970624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15954523-15970624:1:exon

SAMSN1-AS1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: SAMSN1-AS1
product: SAMSN1 antisense RNA 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_046512.1
SIO_010081: SAMSN1-AS1
so part of: SAMSN1-AS1
location: join(15954523..15954612,15957683..15957859,15963643..15963789,15967015..15967061,15970246..15970624)
location: region:15954523-15970624:1
so has part: feature:15954523-15954612:1:exon
so has part: feature:15957683-15957859:1:exon
so has part: feature:15963643-15963789:1:exon
so has part: feature:15967015-15967061:1:exon
so has part: feature:15970246-15970624:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15954523-15954612:1:exon

position:15954612:1
position: 15954612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15957683-15957859:1:exon

position:15957683:1
position: 15957683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15957859:1
position: 15957859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15963643-15963789:1:exon

position:15963643:1
position: 15963643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15963789:1
position: 15963789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15967015-15967061:1:exon

position:15967015:1
position: 15967015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15967061:1
position: 15967061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15970246-15970624:1:exon

position:15970246:1
position: 15970246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC388813
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC388813
note: uncharacterized protein ENSP00000383407-like; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(15964484..16015428)
location: region:15964484-16015428:-1
so has part: feature:15964484-16015428:-1:exon
subclass of: SO_0000010

388813
type: Gene
SIO_000068: ncbigene

position:15964484:-1
position: 15964484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16015428:-1
position: 16015428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15964484-16015428:-1:exon

LOC388813
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
gene: LOC388813
product: uncharacterized protein ENSP00000383407-like
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001256579.1
SIO_010081: LOC388813
subclass of: SO_0000673
so part of: LOC388813
location: complement(join(15964484..15964960,15966334..15966399,15974344..15974420,15981803..15981889,15985197..15985234,15988297..15988337,16015323..16015428))
location: region:15964484-16015428:-1
so has part: feature:16015323-16015428:-1:exon
so has part: feature:15988297-15988337:-1:exon
so has part: feature:15985197-15985234:-1:exon
so has part: feature:15981803-15981889:-1:exon
so has part: feature:15974344-15974420:-1:exon
so has part: feature:15966334-15966399:-1:exon
so has part: feature:15964484-15964960:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16015323-16015428:-1:exon

position:16015323:-1
position: 16015323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15988297-15988337:-1:exon

position:15988297:-1
position: 15988297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15988337:-1
position: 15988337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15985197-15985234:-1:exon

position:15985197:-1
position: 15985197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15985234:-1
position: 15985234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15981803-15981889:-1:exon

position:15981803:-1
position: 15981803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15981889:-1
position: 15981889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15974344-15974420:-1:exon

position:15974344:-1
position: 15974344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15974420:-1
position: 15974420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15966334-15966399:-1:exon

position:15966334:-1
position: 15966334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15966399:-1
position: 15966399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:15964484-15964960:-1:exon

position:15964960:-1
position: 15964960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC388813
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
gene: LOC388813
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: putative uncharacterized protein ENSP00000383407
translation: MSSRTDSPIPPFGESEQTPNNLFVGVSNLENAKPKKRKLFRRFMSENKIFEGKTVNDKIWQEHSKHKNDSHIRRPCQLKDLNENDFLSNNIHTYQGKTLQGTSYQVTSECWSPFHYQRHVETTVDELAQEFM
SIO_010081: LOC388813
subclass of: SO_0000673
so part of: LOC388813
location: complement(join(15964943..15964960,15966334..15966399,15974344..15974420,15981803..15981889,15985197..15985234,15988297..15988337,16015323..16015394))
location: region:15964943-16015394:-1
so has part: feature:16015323-16015394:-1:exon
so has part: feature:15988297-15988337:-1:exon
so has part: feature:15985197-15985234:-1:exon
so has part: feature:15981803-15981889:-1:exon
so has part: feature:15974344-15974420:-1:exon
so has part: feature:15966334-15966399:-1:exon
so has part: feature:15964943-15964960:-1:exon

NP_001243508.1
type: Protein
SIO_000068: ncbiprotein

position:15964943:-1
position: 15964943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16015394:-1
position: 16015394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16015323-16015394:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15988297-15988337:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15985197-15985234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15981803-15981889:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15974344-15974420:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15966334-15966399:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15964943-15964960:-1:exon

POLR2CP
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: POLR2CP
note: polymerase (RNA) II (DNA directed) polypeptide C, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 16129879..16131542
location: region:16129879-16131542:1
so has part: feature:16129879-16131542:1:exon

54038
type: Gene
SIO_000068: ncbigene

HGNC:9190
type: HGNC
SIO_000068: hgnc

position:16129879:1
position: 16129879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16131542:1
position: 16131542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16129879-16131542:1:exon

POLR2CP
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: POLR2CP
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: POLR2CP
subclass of: SO_0000673
so part of: POLR2CP
location: 16129879..16131542
location: region:16129879-16131542:1
so has part: feature:16129879-16131542:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16129879-16131542:1:exon

GAPDHP16
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: GAPDP16
gene: GAPDHP16
gene synonym: GAPDP16
note: glyceraldehyde-3-phosphate dehydrogenase pseudogene 16; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 16146624..16147801
location: region:16146624-16147801:1
so has part: feature:16146624-16147801:1:exon

387491
type: Gene
SIO_000068: ncbigene

HGNC:23768
type: HGNC
SIO_000068: hgnc

position:16146624:1
position: 16146624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16147801:1
position: 16147801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16146624-16147801:1:exon

RBMX2P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: RBMX2P1
note: RNA binding motif protein, X-linked 2 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(16201470..16202310)
location: region:16201470-16202310:-1
so has part: feature:16201470-16202310:-1:exon

100128341
type: Gene
SIO_000068: ncbigene

HGNC:39923
type: HGNC
SIO_000068: hgnc

position:16201470:-1
position: 16201470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16202310:-1
position: 16202310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16201470-16202310:-1:exon

NRIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: RIP140
gene: NRIP1
gene synonym: RIP140
note: nuclear receptor interacting protein 1; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(16333556..16438224)
location: region:16333556-16438224:-1
so has part: feature:16333556-16438224:-1:exon
subclass of: SO_0000010

8204
type: Gene
SIO_000068: ncbigene

HGNC:8001
type: HGNC
SIO_000068: hgnc

602490
type: OMIM
SIO_000068: omim

position:16333556:-1
position: 16333556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16438224:-1
position: 16438224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16333556-16438224:-1:exon

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: RIP140
gene: NRIP1
gene synonym: RIP140
product: nuclear receptor interacting protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 65 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005261064.1
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(16333556..16340847,16415816..16415895,16438046..16438224))
location: region:16333556-16438224:-1
so has part: feature:16438046-16438224:-1:exon
so has part: feature:16415816-16415895:-1:exon
so has part: feature:16333556-16340847:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16438046-16438224:-1:exon

position:16438046:-1
position: 16438046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16415816-16415895:-1:exon

position:16415816:-1
position: 16415816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16415895:-1
position: 16415895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16333556-16340847:-1:exon

position:16340847:-1
position: 16340847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: RIP140
gene: NRIP1
gene synonym: RIP140
product: nuclear receptor interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 64 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005261062.1
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(16333556..16340847,16386665..16386787,16415816..16415895,16438046..16438224))
location: region:16333556-16438224:-1
so has part: feature:16438046-16438224:-1:exon
so has part: feature:16415816-16415895:-1:exon
so has part: feature:16386665-16386787:-1:exon
so has part: feature:16333556-16340847:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16438046-16438224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16415816-16415895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16386665-16386787:-1:exon

position:16386665:-1
position: 16386665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16386787:-1
position: 16386787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16333556-16340847:-1:exon

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: RIP140
gene: NRIP1
gene synonym: RIP140
product: nuclear receptor interacting protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 63 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005261065.1
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(16333556..16340847,16437066..16437250))
location: region:16333556-16437250:-1
so has part: feature:16437066-16437250:-1:exon
so has part: feature:16333556-16340847:-1:exon

position:16437250:-1
position: 16437250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16437066-16437250:-1:exon

position:16437066:-1
position: 16437066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16333556-16340847:-1:exon

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: RIP140
gene: NRIP1
gene synonym: RIP140
product: nuclear receptor interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 63 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005261063.1
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(16333556..16340847,16415816..16415895,16437066..16437250))
location: region:16333556-16437250:-1
so has part: feature:16437066-16437250:-1:exon
so has part: feature:16415816-16415895:-1:exon
so has part: feature:16333556-16340847:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16437066-16437250:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16415816-16415895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16333556-16340847:-1:exon

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: RIP140
gene: NRIP1
gene synonym: RIP140
product: nuclear receptor interacting protein 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_003489.3
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(16333556..16340847,16386665..16386787,16415816..16415895,16437066..16437126))
location: region:16333556-16437126:-1
so has part: feature:16437066-16437126:-1:exon
so has part: feature:16415816-16415895:-1:exon
so has part: feature:16386665-16386787:-1:exon
so has part: feature:16333556-16340847:-1:exon

position:16437126:-1
position: 16437126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16437066-16437126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16415816-16415895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16386665-16386787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16333556-16340847:-1:exon

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: RIP140
gene: NRIP1
gene synonym: RIP140
product: nuclear receptor interacting protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 63 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005261066.1
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(16333556..16340847,16351522..16352015))
location: region:16333556-16352015:-1
so has part: feature:16351522-16352015:-1:exon
so has part: feature:16333556-16340847:-1:exon

position:16352015:-1
position: 16352015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16351522-16352015:-1:exon

position:16351522:-1
position: 16351522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16333556-16340847:-1:exon

NRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: RIP140
gene: NRIP1
gene synonym: RIP140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1 isoform X1
translation: MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISGSAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEALLAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPSSPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTIDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKVPDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYARTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTASNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLLTGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHDAKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDSDRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLLNQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSNSVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFPEHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQDKDIWREASSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASRPHSANGEVYGLLGSVLTIKKESE
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(16337037..16340513)
location: region:16337037-16340513:-1
so has part: feature:16337037-16340513:-1:exon

XP_005261119.1
type: Protein
SIO_000068: ncbiprotein

position:16337037:-1
position: 16337037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16340513:-1
position: 16340513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16337037-16340513:-1:exon

NRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: RIP140
gene: NRIP1
gene synonym: RIP140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1 isoform X2
translation: MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISGSAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEALLAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPSSPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTIDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKVPDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYARTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTASNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLLTGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHDAKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDSDRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLLNQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSNSVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFPEHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQDKDIWREASSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASRPHSANGEVYGLLGSVLTIKKESE
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(16337037..16340513)
location: region:16337037-16340513:-1
so has part: feature:16337037-16340513:-1:exon

XP_005261120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16337037-16340513:-1:exon

NRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: RIP140
gene: NRIP1
gene synonym: RIP140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1 isoform X3
translation: MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISGSAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEALLAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPSSPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTIDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKVPDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYARTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTASNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLLTGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHDAKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDSDRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLLNQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSNSVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFPEHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQDKDIWREASSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASRPHSANGEVYGLLGSVLTIKKESE
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(16337037..16340513)
location: region:16337037-16340513:-1
so has part: feature:16337037-16340513:-1:exon

XP_005261121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16337037-16340513:-1:exon

NRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: RIP140
gene: NRIP1
gene synonym: RIP140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1 isoform X4
translation: MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISGSAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEALLAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPSSPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTIDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKVPDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYARTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTASNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLLTGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHDAKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDSDRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLLNQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSNSVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFPEHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQDKDIWREASSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASRPHSANGEVYGLLGSVLTIKKESE
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(16337037..16340513)
location: region:16337037-16340513:-1
so has part: feature:16337037-16340513:-1:exon

XP_005261122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16337037-16340513:-1:exon

NRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: RIP140
gene: NRIP1
gene synonym: RIP140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1 isoform X5
translation: MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISGSAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEALLAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPSSPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTIDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKVPDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYARTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTASNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLLTGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHDAKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDSDRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLLNQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSNSVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFPEHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQDKDIWREASSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASRPHSANGEVYGLLGSVLTIKKESE
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(16337037..16340513)
location: region:16337037-16340513:-1
so has part: feature:16337037-16340513:-1:exon

XP_005261123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16337037-16340513:-1:exon

NRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: RIP140
gene: NRIP1
gene synonym: RIP140
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: nuclear receptor-interacting protein 1
translation: MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISGSAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEALLAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPSSPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTIDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKVPDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYARTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTASNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLLTGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHDAKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDSDRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLLNQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSNSVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFPEHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQDKDIWREASSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASRPHSANGEVYGLLGSVLTIKKESE
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(16337037..16340513)
location: region:16337037-16340513:-1
so has part: feature:16337037-16340513:-1:exon

NP_003480.2
type: Protein
SIO_000068: ncbiprotein

CCDS13568.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:16337037-16340513:-1:exon

LOC101927745
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC101927745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(16777246..16785242)
location: region:16777246-16785242:-1
so has part: feature:16777246-16785242:-1:exon

101927745
type: Gene
SIO_000068: ncbigene

position:16777246:-1
position: 16777246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16785242:-1
position: 16785242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16777246-16785242:-1:exon

LOC101927745
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC101927745
product: uncharacterized LOC101927745
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_244293.1
SIO_010081: LOC101927745
so part of: LOC101927745
location: complement(join(16777246..16778083,16778199..16778248,16784995..16785242))
location: region:16777246-16785242:-1
so has part: feature:16784995-16785242:-1:exon
so has part: feature:16778199-16778248:-1:exon
so has part: feature:16777246-16778083:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16784995-16785242:-1:exon

position:16784995:-1
position: 16784995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16778199-16778248:-1:exon

position:16778199:-1
position: 16778199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16778248:-1
position: 16778248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16777246-16778083:-1:exon

position:16778083:-1
position: 16778083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CYCSP42
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CYC1LP5
alternative label: HCP42
gene: CYCSP42
gene synonym: CYC1LP5; HCP42
note: cytochrome c, somatic pseudogene 42; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(16862843..16863101)
location: region:16862843-16863101:-1
so has part: feature:16862843-16863101:-1:exon

343727
type: Gene
SIO_000068: ncbigene

HGNC:2581
type: HGNC
SIO_000068: hgnc

position:16862843:-1
position: 16862843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16863101:-1
position: 16863101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16862843-16863101:-1:exon

RAD23BLP
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: RAD23BLP
note: RAD23 homolog B-like (S. cerevisiae) pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(17066619..17068730)
location: region:17066619-17068730:-1
so has part: feature:17066619-17068730:-1:exon

54034
type: Gene
SIO_000068: ncbigene

HGNC:9814
type: HGNC
SIO_000068: hgnc

position:17066619:-1
position: 17066619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17068730:-1
position: 17068730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17066619-17068730:-1:exon

USP25
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: USP21
gene: USP25
gene synonym: USP21
note: ubiquitin specific peptidase 25; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 17102327..17252377
location: region:17102327-17252377:1
so has part: feature:17102327-17252377:1:exon
subclass of: SO_0000010

29761
type: Gene
SIO_000068: ncbigene

HGNC:12624
type: HGNC
SIO_000068: hgnc

604736
type: OMIM
SIO_000068: omim

position:17102327:1
position: 17102327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17252377:1
position: 17252377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17102327-17252377:1:exon

USP25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: USP21
gene: USP25
gene synonym: USP21
product: ubiquitin specific peptidase 25, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 65 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005260946.1
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(17102327..17102757,17135210..17135287,17138316..17138460,17150223..17150346,17163821..17163983,17172076..17172162,17177440..17177577,17181128..17181204,17183456..17183529,17191017..17191165,17196358..17196485,17197285..17197380,17198523..17198684,17199296..17199522,17202850..17202920,17203720..17203948,17205667..17205867,17214717..17214859,17219982..17220095,17222096..17222191,17236587..17236765,17238585..17238663,17242387..17242466,17246722..17246845,17250115..17250310,17250622..17251230)
location: region:17102327-17251230:1
so has part: feature:17102327-17102757:1:exon
so has part: feature:17135210-17135287:1:exon
so has part: feature:17138316-17138460:1:exon
so has part: feature:17150223-17150346:1:exon
so has part: feature:17163821-17163983:1:exon
so has part: feature:17172076-17172162:1:exon
so has part: feature:17177440-17177577:1:exon
so has part: feature:17181128-17181204:1:exon
so has part: feature:17183456-17183529:1:exon
so has part: feature:17191017-17191165:1:exon
so has part: feature:17196358-17196485:1:exon
so has part: feature:17197285-17197380:1:exon
so has part: feature:17198523-17198684:1:exon
so has part: feature:17199296-17199522:1:exon
so has part: feature:17202850-17202920:1:exon
so has part: feature:17203720-17203948:1:exon
so has part: feature:17205667-17205867:1:exon
so has part: feature:17214717-17214859:1:exon
so has part: feature:17219982-17220095:1:exon
so has part: feature:17222096-17222191:1:exon
so has part: feature:17236587-17236765:1:exon
so has part: feature:17238585-17238663:1:exon
so has part: feature:17242387-17242466:1:exon
so has part: feature:17246722-17246845:1:exon
so has part: feature:17250115-17250310:1:exon
so has part: feature:17250622-17251230:1:exon

position:17251230:1
position: 17251230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17102327-17102757:1:exon

position:17102757:1
position: 17102757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17135210-17135287:1:exon

position:17135210:1
position: 17135210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17135287:1
position: 17135287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17138316-17138460:1:exon

position:17138316:1
position: 17138316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17138460:1
position: 17138460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17150223-17150346:1:exon

position:17150223:1
position: 17150223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17150346:1
position: 17150346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17163821-17163983:1:exon

position:17163821:1
position: 17163821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17163983:1
position: 17163983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:17172076-17172162:1:exon

position:17172076:1
position: 17172076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17172162:1
position: 17172162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:17177440-17177577:1:exon

position:17177440:1
position: 17177440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17177577:1
position: 17177577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:17181128-17181204:1:exon

position:17181128:1
position: 17181128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17181204:1
position: 17181204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:17183456-17183529:1:exon

position:17183456:1
position: 17183456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17183529:1
position: 17183529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:17191017-17191165:1:exon

position:17191017:1
position: 17191017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17191165:1
position: 17191165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:17196358-17196485:1:exon

position:17196358:1
position: 17196358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17196485:1
position: 17196485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:17197285-17197380:1:exon

position:17197285:1
position: 17197285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17197380:1
position: 17197380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:17198523-17198684:1:exon

position:17198523:1
position: 17198523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17198684:1
position: 17198684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:17199296-17199522:1:exon

position:17199296:1
position: 17199296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17199522:1
position: 17199522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:17202850-17202920:1:exon

position:17202850:1
position: 17202850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17202920:1
position: 17202920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:17203720-17203948:1:exon

position:17203720:1
position: 17203720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17203948:1
position: 17203948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:17205667-17205867:1:exon

position:17205667:1
position: 17205667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17205867:1
position: 17205867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:17214717-17214859:1:exon

position:17214717:1
position: 17214717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17214859:1
position: 17214859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:17219982-17220095:1:exon

position:17219982:1
position: 17219982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17220095:1
position: 17220095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:17222096-17222191:1:exon

position:17222096:1
position: 17222096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17222191:1
position: 17222191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:17236587-17236765:1:exon

position:17236587:1
position: 17236587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17236765:1
position: 17236765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:17238585-17238663:1:exon

position:17238585:1
position: 17238585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17238663:1
position: 17238663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:17242387-17242466:1:exon

position:17242387:1
position: 17242387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17242466:1
position: 17242466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:17246722-17246845:1:exon

position:17246722:1
position: 17246722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17246845:1
position: 17246845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:17250115-17250310:1:exon

position:17250115:1
position: 17250115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17250310:1
position: 17250310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:17250622-17251230:1:exon

position:17250622:1
position: 17250622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

USP25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: USP21
gene: USP25
gene synonym: USP21
product: ubiquitin specific peptidase 25, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 63 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005260947.1
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(17102328..17102757,17135210..17135287,17138316..17138460,17150223..17150346,17163821..17163983,17172076..17172162,17177440..17177577,17181128..17181204,17183456..17183529,17191017..17191165,17196358..17196485,17197285..17197380,17198523..17198684,17199296..17199522,17202850..17202920,17203720..17203948,17205667..17205867,17214717..17214859,17219982..17220095,17236587..17236765,17238585..17238663,17242387..17242466,17246722..17246845,17250115..17250310,17250622..17251230)
location: region:17102328-17251230:1
so has part: feature:17102328-17102757:1:exon
so has part: feature:17135210-17135287:1:exon
so has part: feature:17138316-17138460:1:exon
so has part: feature:17150223-17150346:1:exon
so has part: feature:17163821-17163983:1:exon
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so has part: feature:17250115-17250310:1:exon
so has part: feature:17250622-17251230:1:exon

position:17102328:1
position: 17102328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000300: 21
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urn:…
SIO_000300: 22
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SIO_000300: 23
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urn:…
SIO_000300: 24
SIO_000628: feature:17250115-17250310:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:17250622-17251230:1:exon

USP25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: USP21
gene: USP25
gene synonym: USP21
product: ubiquitin specific peptidase 25, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 63 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005260948.1
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(17102328..17102757,17135210..17135287,17138316..17138460,17150223..17150346,17163821..17163983,17172076..17172162,17177440..17177577,17181128..17181204,17183456..17183529,17191017..17191165,17196358..17196485,17197285..17197380,17198523..17198684,17199296..17199522,17202850..17202920,17203720..17203948,17205667..17205867,17214717..17214859,17222096..17222191,17236587..17236765,17238585..17238663,17242387..17242466,17246722..17246845,17250115..17250310,17250622..17251230)
location: region:17102328-17251230:1
so has part: feature:17102328-17102757:1:exon
so has part: feature:17135210-17135287:1:exon
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so has part: feature:17191017-17191165:1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 24
SIO_000628: feature:17250115-17250310:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:17250622-17251230:1:exon

USP25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: USP21
gene: USP25
gene synonym: USP21
product: ubiquitin specific peptidase 25
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_013396.3
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(17102496..17102757,17135210..17135287,17138316..17138460,17150223..17150346,17163821..17163983,17172076..17172162,17177440..17177577,17181128..17181204,17183456..17183529,17191017..17191165,17196358..17196485,17197285..17197380,17198523..17198684,17199296..17199522,17202850..17202920,17203720..17203948,17205667..17205867,17214717..17214859,17236587..17236765,17238585..17238663,17242387..17242466,17246722..17246845,17250115..17250310,17250622..17252377)
location: region:17102496-17252377:1
so has part: feature:17102496-17102757:1:exon
so has part: feature:17135210-17135287:1:exon
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so has part: feature:17250115-17250310:1:exon
so has part: feature:17250622-17252377:1:exon

position:17102496:1
position: 17102496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17102496-17102757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17135210-17135287:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17138316-17138460:1:exon

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SIO_000628: feature:17150223-17150346:1:exon

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SIO_000300: 5
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 24
SIO_000628: feature:17250622-17252377:1:exon

USP25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: USP21
gene: USP25
gene synonym: USP21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X1
translation: MTVEQNVLQQSAAQKHQQTFLNQLREITGINDTQILQQALKDSNGNLELAVAFLTAKNAKTPQQEETTYYQTALPGNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLAESNRAFRETGITDEEQAISRVLEASIAENKACLKRTPTEVWRDSRNPYDRKRQDKAPVGLKNVGNTCWFSAVIQSLFNLLEFRRLVLNYKPPSNAQDLPRNQKEHRNLPFMRELRYLFALLVGTKRKYVDPSRAVEILKDAFKSNDSQQQDVSEFTHKLLDWLEDAFQMKAEEETDEEKPKNPMVELFYGRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSGKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPQVLYLDRYMHRNREITRIKREEIKRLKDYLTVLQQRLERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPVDDIDASSPPSGSIPSQTLPSTTEQQGALSSELPSTSPSSVAAISSRSVIHKPFTQSRIPPDLPMHPAPRHITEEELSVLESCLHRWRTEIENDTRDLQESISRIHRTIELMYSDKSMIQVPYRLHAVLVHEGQANAGHYWAYIFDHRESRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCLMYINDKAQFLIQEEFNKETGQPLVGIETLPPDLRDFVEEDNQRFEKELEEWDAQLAQKALQEKLLASQKLRESETSVTTAQAAGDPEYLEQPSRSDFSKHLKEETIQIITKASHEHEDKSPETVLQSKPENTTSQPLSNQRVVEVAIPHVGKFMIESKEGGYDDEIMMTPNMQGIIMAIGKSRSVYDRCGPEAGFFKAIKLEYARLVKLAQEDTPPETDYRLHHVVVYFIQNQAPKKIIEKTLLEQFGDRNLSFDERCHNIMKVAQAKLEMIKPEEVNLEEYEEWHQDYRKFRETTMYLIIGLENFQRESYIDSLLFLICAYQNNKELLSKGLYRGHDEELISHYRRECLLKLNEQAAELFESGEDREVNNGLIIMNEFIVPFLPLLLVDEMEEKDILAVEDMRNRWCSYLGQEMEPHLQEKLTDFLPKLLDCSMEIKSFHEPPKLPSYSTHELCERFARIMLSLSRTPADGR
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(17102713..17102757,17135210..17135287,17138316..17138460,17150223..17150346,17163821..17163983,17172076..17172162,17177440..17177577,17181128..17181204,17183456..17183529,17191017..17191165,17196358..17196485,17197285..17197380,17198523..17198684,17199296..17199522,17202850..17202920,17203720..17203948,17205667..17205867,17214717..17214859,17219982..17220095,17222096..17222191,17236587..17236765,17238585..17238663,17242387..17242466,17246722..17246845,17250115..17250310,17250622..17250794)
location: region:17102713-17250794:1
so has part: feature:17102713-17102757:1:exon
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so has part: feature:17250115-17250310:1:exon
so has part: feature:17250622-17250794:1:exon

XP_005261003.1
type: Protein
SIO_000068: ncbiprotein

position:17102713:1
position: 17102713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17250794:1
position: 17250794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17102713-17102757:1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:17242387-17242466:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:17246722-17246845:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:17250115-17250310:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:17250622-17250794:1:exon

USP25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: USP21
gene: USP25
gene synonym: USP21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X2
translation: MTVEQNVLQQSAAQKHQQTFLNQLREITGINDTQILQQALKDSNGNLELAVAFLTAKNAKTPQQEETTYYQTALPGNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLAESNRAFRETGITDEEQAISRVLEASIAENKACLKRTPTEVWRDSRNPYDRKRQDKAPVGLKNVGNTCWFSAVIQSLFNLLEFRRLVLNYKPPSNAQDLPRNQKEHRNLPFMRELRYLFALLVGTKRKYVDPSRAVEILKDAFKSNDSQQQDVSEFTHKLLDWLEDAFQMKAEEETDEEKPKNPMVELFYGRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSGKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPQVLYLDRYMHRNREITRIKREEIKRLKDYLTVLQQRLERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPVDDIDASSPPSGSIPSQTLPSTTEQQGALSSELPSTSPSSVAAISSRSVIHKPFTQSRIPPDLPMHPAPRHITEEELSVLESCLHRWRTEIENDTRDLQESISRIHRTIELMYSDKSMIQVPYRLHAVLVHEGQANAGHYWAYIFDHRESRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCLMYINDKAQFLIQEEFNKETGQPLVGIETLPPDLRDFVEEDNQRFEKELEEWDAQLAQKALQEKLLASQKLRESETSVTTAQAAGDPEYLEQPSRSDFSKHLKEETIQIITKASHEHEDKSPETVLQSKPENTTSQPLSNQRVVEVAIPHVGKFMIESKEGGYDDEAIKLEYARLVKLAQEDTPPETDYRLHHVVVYFIQNQAPKKIIEKTLLEQFGDRNLSFDERCHNIMKVAQAKLEMIKPEEVNLEEYEEWHQDYRKFRETTMYLIIGLENFQRESYIDSLLFLICAYQNNKELLSKGLYRGHDEELISHYRRECLLKLNEQAAELFESGEDREVNNGLIIMNEFIVPFLPLLLVDEMEEKDILAVEDMRNRWCSYLGQEMEPHLQEKLTDFLPKLLDCSMEIKSFHEPPKLPSYSTHELCERFARIMLSLSRTPADGR
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(17102713..17102757,17135210..17135287,17138316..17138460,17150223..17150346,17163821..17163983,17172076..17172162,17177440..17177577,17181128..17181204,17183456..17183529,17191017..17191165,17196358..17196485,17197285..17197380,17198523..17198684,17199296..17199522,17202850..17202920,17203720..17203948,17205667..17205867,17214717..17214859,17219982..17220095,17236587..17236765,17238585..17238663,17242387..17242466,17246722..17246845,17250115..17250310,17250622..17250794)
location: region:17102713-17250794:1
so has part: feature:17102713-17102757:1:exon
so has part: feature:17135210-17135287:1:exon
so has part: feature:17138316-17138460:1:exon
so has part: feature:17150223-17150346:1:exon
so has part: feature:17163821-17163983:1:exon
so has part: feature:17172076-17172162:1:exon
so has part: feature:17177440-17177577:1:exon
so has part: feature:17181128-17181204:1:exon
so has part: feature:17183456-17183529:1:exon
so has part: feature:17191017-17191165:1:exon
so has part: feature:17196358-17196485:1:exon
so has part: feature:17197285-17197380:1:exon
so has part: feature:17198523-17198684:1:exon
so has part: feature:17199296-17199522:1:exon
so has part: feature:17202850-17202920:1:exon
so has part: feature:17203720-17203948:1:exon
so has part: feature:17205667-17205867:1:exon
so has part: feature:17214717-17214859:1:exon
so has part: feature:17219982-17220095:1:exon
so has part: feature:17236587-17236765:1:exon
so has part: feature:17238585-17238663:1:exon
so has part: feature:17242387-17242466:1:exon
so has part: feature:17246722-17246845:1:exon
so has part: feature:17250115-17250310:1:exon
so has part: feature:17250622-17250794:1:exon

XP_005261004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17102713-17102757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17135210-17135287:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17138316-17138460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17150223-17150346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17163821-17163983:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17172076-17172162:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17177440-17177577:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17181128-17181204:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17183456-17183529:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17191017-17191165:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17196358-17196485:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17197285-17197380:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17198523-17198684:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17199296-17199522:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17202850-17202920:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:17203720-17203948:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:17205667-17205867:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:17214717-17214859:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:17219982-17220095:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:17236587-17236765:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:17238585-17238663:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:17242387-17242466:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:17246722-17246845:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:17250115-17250310:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:17250622-17250794:1:exon

USP25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: USP21
gene: USP25
gene synonym: USP21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X3
translation: MTVEQNVLQQSAAQKHQQTFLNQLREITGINDTQILQQALKDSNGNLELAVAFLTAKNAKTPQQEETTYYQTALPGNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLAESNRAFRETGITDEEQAISRVLEASIAENKACLKRTPTEVWRDSRNPYDRKRQDKAPVGLKNVGNTCWFSAVIQSLFNLLEFRRLVLNYKPPSNAQDLPRNQKEHRNLPFMRELRYLFALLVGTKRKYVDPSRAVEILKDAFKSNDSQQQDVSEFTHKLLDWLEDAFQMKAEEETDEEKPKNPMVELFYGRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSGKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPQVLYLDRYMHRNREITRIKREEIKRLKDYLTVLQQRLERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPVDDIDASSPPSGSIPSQTLPSTTEQQGALSSELPSTSPSSVAAISSRSVIHKPFTQSRIPPDLPMHPAPRHITEEELSVLESCLHRWRTEIENDTRDLQESISRIHRTIELMYSDKSMIQVPYRLHAVLVHEGQANAGHYWAYIFDHRESRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCLMYINDKAQFLIQEEFNKETGQPLVGIETLPPDLRDFVEEDNQRFEKELEEWDAQLAQKALQEKLLASQKLRESETSVTTAQAAGDPEYLEQPSRSDFSKHLKEETIQIITKASHEHEDKSPETVLQSIMMTPNMQGIIMAIGKSRSVYDRCGPEAGFFKAIKLEYARLVKLAQEDTPPETDYRLHHVVVYFIQNQAPKKIIEKTLLEQFGDRNLSFDERCHNIMKVAQAKLEMIKPEEVNLEEYEEWHQDYRKFRETTMYLIIGLENFQRESYIDSLLFLICAYQNNKELLSKGLYRGHDEELISHYRRECLLKLNEQAAELFESGEDREVNNGLIIMNEFIVPFLPLLLVDEMEEKDILAVEDMRNRWCSYLGQEMEPHLQEKLTDFLPKLLDCSMEIKSFHEPPKLPSYSTHELCERFARIMLSLSRTPADGR
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(17102713..17102757,17135210..17135287,17138316..17138460,17150223..17150346,17163821..17163983,17172076..17172162,17177440..17177577,17181128..17181204,17183456..17183529,17191017..17191165,17196358..17196485,17197285..17197380,17198523..17198684,17199296..17199522,17202850..17202920,17203720..17203948,17205667..17205867,17214717..17214859,17222096..17222191,17236587..17236765,17238585..17238663,17242387..17242466,17246722..17246845,17250115..17250310,17250622..17250794)
location: region:17102713-17250794:1
so has part: feature:17102713-17102757:1:exon
so has part: feature:17135210-17135287:1:exon
so has part: feature:17138316-17138460:1:exon
so has part: feature:17150223-17150346:1:exon
so has part: feature:17163821-17163983:1:exon
so has part: feature:17172076-17172162:1:exon
so has part: feature:17177440-17177577:1:exon
so has part: feature:17181128-17181204:1:exon
so has part: feature:17183456-17183529:1:exon
so has part: feature:17191017-17191165:1:exon
so has part: feature:17196358-17196485:1:exon
so has part: feature:17197285-17197380:1:exon
so has part: feature:17198523-17198684:1:exon
so has part: feature:17199296-17199522:1:exon
so has part: feature:17202850-17202920:1:exon
so has part: feature:17203720-17203948:1:exon
so has part: feature:17205667-17205867:1:exon
so has part: feature:17214717-17214859:1:exon
so has part: feature:17222096-17222191:1:exon
so has part: feature:17236587-17236765:1:exon
so has part: feature:17238585-17238663:1:exon
so has part: feature:17242387-17242466:1:exon
so has part: feature:17246722-17246845:1:exon
so has part: feature:17250115-17250310:1:exon
so has part: feature:17250622-17250794:1:exon

XP_005261005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17102713-17102757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17135210-17135287:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17138316-17138460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17150223-17150346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17163821-17163983:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17172076-17172162:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17177440-17177577:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17181128-17181204:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17183456-17183529:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17191017-17191165:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17196358-17196485:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17197285-17197380:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17198523-17198684:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17199296-17199522:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17202850-17202920:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:17203720-17203948:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:17205667-17205867:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:17214717-17214859:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:17222096-17222191:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:17236587-17236765:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:17238585-17238663:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:17242387-17242466:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:17246722-17246845:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:17250115-17250310:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:17250622-17250794:1:exon

USP25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: USP21
gene: USP25
gene synonym: USP21
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25
translation: MTVEQNVLQQSAAQKHQQTFLNQLREITGINDTQILQQALKDSNGNLELAVAFLTAKNAKTPQQEETTYYQTALPGNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLAESNRAFRETGITDEEQAISRVLEASIAENKACLKRTPTEVWRDSRNPYDRKRQDKAPVGLKNVGNTCWFSAVIQSLFNLLEFRRLVLNYKPPSNAQDLPRNQKEHRNLPFMRELRYLFALLVGTKRKYVDPSRAVEILKDAFKSNDSQQQDVSEFTHKLLDWLEDAFQMKAEEETDEEKPKNPMVELFYGRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSGKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPQVLYLDRYMHRNREITRIKREEIKRLKDYLTVLQQRLERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPVDDIDASSPPSGSIPSQTLPSTTEQQGALSSELPSTSPSSVAAISSRSVIHKPFTQSRIPPDLPMHPAPRHITEEELSVLESCLHRWRTEIENDTRDLQESISRIHRTIELMYSDKSMIQVPYRLHAVLVHEGQANAGHYWAYIFDHRESRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCLMYINDKAQFLIQEEFNKETGQPLVGIETLPPDLRDFVEEDNQRFEKELEEWDAQLAQKALQEKLLASQKLRESETSVTTAQAAGDPEYLEQPSRSDFSKHLKEETIQIITKASHEHEDKSPETVLQSAIKLEYARLVKLAQEDTPPETDYRLHHVVVYFIQNQAPKKIIEKTLLEQFGDRNLSFDERCHNIMKVAQAKLEMIKPEEVNLEEYEEWHQDYRKFRETTMYLIIGLENFQRESYIDSLLFLICAYQNNKELLSKGLYRGHDEELISHYRRECLLKLNEQAAELFESGEDREVNNGLIIMNEFIVPFLPLLLVDEMEEKDILAVEDMRNRWCSYLGQEMEPHLQEKLTDFLPKLLDCSMEIKSFHEPPKLPSYSTHELCERFARIMLSLSRTPADGR
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(17102713..17102757,17135210..17135287,17138316..17138460,17150223..17150346,17163821..17163983,17172076..17172162,17177440..17177577,17181128..17181204,17183456..17183529,17191017..17191165,17196358..17196485,17197285..17197380,17198523..17198684,17199296..17199522,17202850..17202920,17203720..17203948,17205667..17205867,17214717..17214859,17236587..17236765,17238585..17238663,17242387..17242466,17246722..17246845,17250115..17250310,17250622..17250794)
location: region:17102713-17250794:1
so has part: feature:17102713-17102757:1:exon
so has part: feature:17135210-17135287:1:exon
so has part: feature:17138316-17138460:1:exon
so has part: feature:17150223-17150346:1:exon
so has part: feature:17163821-17163983:1:exon
so has part: feature:17172076-17172162:1:exon
so has part: feature:17177440-17177577:1:exon
so has part: feature:17181128-17181204:1:exon
so has part: feature:17183456-17183529:1:exon
so has part: feature:17191017-17191165:1:exon
so has part: feature:17196358-17196485:1:exon
so has part: feature:17197285-17197380:1:exon
so has part: feature:17198523-17198684:1:exon
so has part: feature:17199296-17199522:1:exon
so has part: feature:17202850-17202920:1:exon
so has part: feature:17203720-17203948:1:exon
so has part: feature:17205667-17205867:1:exon
so has part: feature:17214717-17214859:1:exon
so has part: feature:17236587-17236765:1:exon
so has part: feature:17238585-17238663:1:exon
so has part: feature:17242387-17242466:1:exon
so has part: feature:17246722-17246845:1:exon
so has part: feature:17250115-17250310:1:exon
so has part: feature:17250622-17250794:1:exon

NP_037528.3
type: Protein
SIO_000068: ncbiprotein

CCDS33515.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:17102713-17102757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17135210-17135287:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17138316-17138460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17150223-17150346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17163821-17163983:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17172076-17172162:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17177440-17177577:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17181128-17181204:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17183456-17183529:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17191017-17191165:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17196358-17196485:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17197285-17197380:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17198523-17198684:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17199296-17199522:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17202850-17202920:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:17203720-17203948:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:17205667-17205867:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:17214717-17214859:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:17236587-17236765:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:17238585-17238663:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:17242387-17242466:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:17246722-17246845:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:17250115-17250310:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:17250622-17250794:1:exon

RBPMSLP
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: RBPMSLP
note: RNA binding protein with multiple splicing-like pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(17116323..17116647)
location: region:17116323-17116647:-1
so has part: feature:17116323-17116647:-1:exon

54032
type: Gene
SIO_000068: ncbigene

HGNC:9923
type: HGNC
SIO_000068: hgnc

position:17116323:-1
position: 17116323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17116647:-1
position: 17116647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17116323-17116647:-1:exon

USP25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: USP21
gene: USP25
gene synonym: USP21
product: ubiquitin specific peptidase 25, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 44 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005260949.1
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(17191040..17191165,17197285..17197380,17198523..17198684,17199296..17199522,17202850..17202920,17203720..17203948,17205667..17205867,17214717..17214859,17219982..17220095,17222096..17222191,17236587..17236765,17238585..17238663,17242387..17242466,17246722..17246845,17250115..17250310,17250622..17252031)
location: region:17191040-17252031:1
so has part: feature:17191040-17191165:1:exon
so has part: feature:17197285-17197380:1:exon
so has part: feature:17198523-17198684:1:exon
so has part: feature:17199296-17199522:1:exon
so has part: feature:17202850-17202920:1:exon
so has part: feature:17203720-17203948:1:exon
so has part: feature:17205667-17205867:1:exon
so has part: feature:17214717-17214859:1:exon
so has part: feature:17219982-17220095:1:exon
so has part: feature:17222096-17222191:1:exon
so has part: feature:17236587-17236765:1:exon
so has part: feature:17238585-17238663:1:exon
so has part: feature:17242387-17242466:1:exon
so has part: feature:17246722-17246845:1:exon
so has part: feature:17250115-17250310:1:exon
so has part: feature:17250622-17252031:1:exon

position:17191040:1
position: 17191040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17252031:1
position: 17252031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17191040-17191165:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17197285-17197380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17198523-17198684:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17199296-17199522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17202850-17202920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17203720-17203948:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17205667-17205867:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17214717-17214859:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17219982-17220095:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17222096-17222191:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17236587-17236765:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17238585-17238663:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17242387-17242466:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17246722-17246845:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17250115-17250310:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:17250622-17252031:1:exon

USP25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: USP21
gene: USP25
gene synonym: USP21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X4
translation: MHRNREITRIKREEIKRLKDYLTVLQQRLERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPVDDIDASSPPSGSIPSQTLPSTTEQQGALSSELPSTSPSSVAAISSRSVIHKPFTQSRIPPDLPMHPAPRHITEEELSVLESCLHRWRTEIENDTRDLQESISRIHRTIELMYSDKSMIQVPYRLHAVLVHEGQANAGHYWAYIFDHRESRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCLMYINDKAQFLIQEEFNKETGQPLVGIETLPPDLRDFVEEDNQRFEKELEEWDAQLAQKALQEKLLASQKLRESETSVTTAQAAGDPEYLEQPSRSDFSKHLKEETIQIITKASHEHEDKSPETVLQSKPENTTSQPLSNQRVVEVAIPHVGKFMIESKEGGYDDEIMMTPNMQGIIMAIGKSRSVYDRCGPEAGFFKAIKLEYARLVKLAQEDTPPETDYRLHHVVVYFIQNQAPKKIIEKTLLEQFGDRNLSFDERCHNIMKVAQAKLEMIKPEEVNLEEYEEWHQDYRKFRETTMYLIIGLENFQRESYIDSLLFLICAYQNNKELLSKGLYRGHDEELISHYRRECLLKLNEQAAELFESGEDREVNNGLIIMNEFIVPFLPLLLVDEMEEKDILAVEDMRNRWCSYLGQEMEPHLQEKLTDFLPKLLDCSMEIKSFHEPPKLPSYSTHELCERFARIMLSLSRTPADGR
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(17197289..17197380,17198523..17198684,17199296..17199522,17202850..17202920,17203720..17203948,17205667..17205867,17214717..17214859,17219982..17220095,17222096..17222191,17236587..17236765,17238585..17238663,17242387..17242466,17246722..17246845,17250115..17250310,17250622..17250794)
location: region:17197289-17250794:1
so has part: feature:17197289-17197380:1:exon
so has part: feature:17198523-17198684:1:exon
so has part: feature:17199296-17199522:1:exon
so has part: feature:17202850-17202920:1:exon
so has part: feature:17203720-17203948:1:exon
so has part: feature:17205667-17205867:1:exon
so has part: feature:17214717-17214859:1:exon
so has part: feature:17219982-17220095:1:exon
so has part: feature:17222096-17222191:1:exon
so has part: feature:17236587-17236765:1:exon
so has part: feature:17238585-17238663:1:exon
so has part: feature:17242387-17242466:1:exon
so has part: feature:17246722-17246845:1:exon
so has part: feature:17250115-17250310:1:exon
so has part: feature:17250622-17250794:1:exon

XP_005261006.1
type: Protein
SIO_000068: ncbiprotein

position:17197289:1
position: 17197289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17197289-17197380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17198523-17198684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17199296-17199522:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17202850-17202920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17203720-17203948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17205667-17205867:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17214717-17214859:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17219982-17220095:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17222096-17222191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17236587-17236765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17238585-17238663:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17242387-17242466:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17246722-17246845:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17250115-17250310:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17250622-17250794:1:exon

LINC00478
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: C21orf34
alternative label: C21orf35
alternative label: FLJ38295
gene: LINC00478
gene synonym: C21orf34; C21orf35; FLJ38295
note: long intergenic non-protein coding RNA 478; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 17442842..17982094
location: region:17442842-17982094:1
so has part: feature:17442842-17982094:1:exon

388815
type: Gene
SIO_000068: ncbigene

HGNC:1274
type: HGNC
SIO_000068: hgnc

position:17442842:1
position: 17442842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17982094:1
position: 17982094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17442842-17982094:1:exon

LINC00478
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf34
alternative label: C21orf35
alternative label: FLJ38295
gene: LINC00478
gene synonym: C21orf34; C21orf35; FLJ38295
product: long intergenic non-protein coding RNA 478, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_027790.1
SIO_010081: LINC00478
so part of: LINC00478
location: join(17442842..17442868,17443434..17443718,17553911..17554007,17603376..17603435,17859810..17859858,17909699..17909759,17966660..17966774,17979314..17982094)
location: region:17442842-17982094:1
so has part: feature:17442842-17442868:1:exon
so has part: feature:17443434-17443718:1:exon
so has part: feature:17553911-17554007:1:exon
so has part: feature:17603376-17603435:1:exon
so has part: feature:17859810-17859858:1:exon
so has part: feature:17909699-17909759:1:exon
so has part: feature:17966660-17966774:1:exon
so has part: feature:17979314-17982094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17442842-17442868:1:exon

position:17442868:1
position: 17442868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17443434-17443718:1:exon

position:17443434:1
position: 17443434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17443718:1
position: 17443718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17553911-17554007:1:exon

position:17553911:1
position: 17553911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17554007:1
position: 17554007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17603376-17603435:1:exon

position:17603376:1
position: 17603376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17603435:1
position: 17603435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17859810-17859858:1:exon

position:17859810:1
position: 17859810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17859858:1
position: 17859858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:17909699-17909759:1:exon

position:17909699:1
position: 17909699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17909759:1
position: 17909759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:17966660-17966774:1:exon

position:17966660:1
position: 17966660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17966774:1
position: 17966774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:17979314-17982094:1:exon

position:17979314:1
position: 17979314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VDAC2P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: VDAC2P
gene: VDAC2P1
gene synonym: VDAC2P
note: voltage-dependent anion channel 2 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(17466509..17467792)
location: region:17466509-17467792:-1
so has part: feature:17466509-17467792:-1:exon

54015
type: Gene
SIO_000068: ncbigene

HGNC:12673
type: HGNC
SIO_000068: hgnc

position:17466509:-1
position: 17466509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17467792:-1
position: 17467792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17466509-17467792:-1:exon

RPS26P5
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: RPS26_31_1718
gene: RPS26P5
gene synonym: RPS26_31_1718
note: ribosomal protein S26 pseudogene 5; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(17493563..17493985)
location: region:17493563-17493985:-1
so has part: feature:17493563-17493985:-1:exon

387495
type: Gene
SIO_000068: ncbigene

HGNC:23776
type: HGNC
SIO_000068: hgnc

position:17493563:-1
position: 17493563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17493985:-1
position: 17493985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17493563-17493985:-1:exon

LINC00478
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf34
alternative label: C21orf35
alternative label: FLJ38295
gene: LINC00478
gene synonym: C21orf34; C21orf35; FLJ38295
product: long intergenic non-protein coding RNA 478, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_244279.1
SIO_010081: LINC00478
so part of: LINC00478
location: join(17566582..17566953,17603376..17603435,17763934..17764005,17859810..17859858,17966660..17966774,17979314..17979461)
location: region:17566582-17979461:1
so has part: feature:17566582-17566953:1:exon
so has part: feature:17603376-17603435:1:exon
so has part: feature:17763934-17764005:1:exon
so has part: feature:17859810-17859858:1:exon
so has part: feature:17966660-17966774:1:exon
so has part: feature:17979314-17979461:1:exon

position:17566582:1
position: 17566582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17979461:1
position: 17979461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17566582-17566953:1:exon

position:17566953:1
position: 17566953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17603376-17603435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17763934-17764005:1:exon

position:17763934:1
position: 17763934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17764005:1
position: 17764005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17859810-17859858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17966660-17966774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17979314-17979461:1:exon

LINC00478
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf34
alternative label: C21orf35
alternative label: FLJ38295
gene: LINC00478
gene synonym: C21orf34; C21orf35; FLJ38295
product: long intergenic non-protein coding RNA 478, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_244278.1
SIO_010081: LINC00478
so part of: LINC00478
location: join(17566585..17566953,17603376..17603435,17763934..17764005,17859810..17859858,17909699..17909759,17966660..17966774,17968705..17968722,17979314..17979461)
location: region:17566585-17979461:1
so has part: feature:17566585-17566953:1:exon
so has part: feature:17603376-17603435:1:exon
so has part: feature:17763934-17764005:1:exon
so has part: feature:17859810-17859858:1:exon
so has part: feature:17909699-17909759:1:exon
so has part: feature:17966660-17966774:1:exon
so has part: feature:17968705-17968722:1:exon
so has part: feature:17979314-17979461:1:exon

position:17566585:1
position: 17566585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17566585-17566953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17603376-17603435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17763934-17764005:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17859810-17859858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17909699-17909759:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17966660-17966774:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17968705-17968722:1:exon

position:17968705:1
position: 17968705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17968722:1
position: 17968722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:17979314-17979461:1:exon

LINC00478
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf34
alternative label: C21orf35
alternative label: FLJ38295
gene: LINC00478
gene synonym: C21orf34; C21orf35; FLJ38295
product: long intergenic non-protein coding RNA 478, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_244275.1
SIO_010081: LINC00478
so part of: LINC00478
location: join(17566588..17566953,17603376..17603435,17763934..17764005,17859810..17859858,17909699..17909759,17966660..17966774,17979314..17979461)
location: region:17566588-17979461:1
so has part: feature:17566588-17566953:1:exon
so has part: feature:17603376-17603435:1:exon
so has part: feature:17763934-17764005:1:exon
so has part: feature:17859810-17859858:1:exon
so has part: feature:17909699-17909759:1:exon
so has part: feature:17966660-17966774:1:exon
so has part: feature:17979314-17979461:1:exon

position:17566588:1
position: 17566588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17566588-17566953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17603376-17603435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17763934-17764005:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17859810-17859858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17909699-17909759:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17966660-17966774:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17979314-17979461:1:exon

LINC00478
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf34
alternative label: C21orf35
alternative label: FLJ38295
gene: LINC00478
gene synonym: C21orf34; C21orf35; FLJ38295
product: long intergenic non-protein coding RNA 478, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_027791.1
SIO_010081: LINC00478
so part of: LINC00478
location: join(17566699..17566953,17603376..17603435,17763934..17764005,17859810..17859858,17909699..17909759,17979314..17982094)
location: region:17566699-17982094:1
so has part: feature:17566699-17566953:1:exon
so has part: feature:17603376-17603435:1:exon
so has part: feature:17763934-17764005:1:exon
so has part: feature:17859810-17859858:1:exon
so has part: feature:17909699-17909759:1:exon
so has part: feature:17979314-17982094:1:exon

position:17566699:1
position: 17566699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17566699-17566953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17603376-17603435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17763934-17764005:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17859810-17859858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17909699-17909759:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17979314-17982094:1:exon

LINC00478
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf34
alternative label: C21orf35
alternative label: FLJ38295
gene: LINC00478
gene synonym: C21orf34; C21orf35; FLJ38295
product: long intergenic non-protein coding RNA 478, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_244277.1
SIO_010081: LINC00478
so part of: LINC00478
location: join(17791561..17792061,17859810..17859858,17909699..17909759,17966660..17966774,17979314..17979461)
location: region:17791561-17979461:1
so has part: feature:17791561-17792061:1:exon
so has part: feature:17859810-17859858:1:exon
so has part: feature:17909699-17909759:1:exon
so has part: feature:17966660-17966774:1:exon
so has part: feature:17979314-17979461:1:exon

position:17791561:1
position: 17791561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17791561-17792061:1:exon

position:17792061:1
position: 17792061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17859810-17859858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17909699-17909759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17966660-17966774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17979314-17979461:1:exon

LINC00478
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf34
alternative label: C21orf35
alternative label: FLJ38295
gene: LINC00478
gene synonym: C21orf34; C21orf35; FLJ38295
product: long intergenic non-protein coding RNA 478, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_244281.1
SIO_010081: LINC00478
so part of: LINC00478
location: join(17791648..17792061,17859810..17859858,17979314..17979461)
location: region:17791648-17979461:1
so has part: feature:17791648-17792061:1:exon
so has part: feature:17859810-17859858:1:exon
so has part: feature:17979314-17979461:1:exon

position:17791648:1
position: 17791648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17791648-17792061:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17859810-17859858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17979314-17979461:1:exon

LINC00478
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf34
alternative label: C21orf35
alternative label: FLJ38295
gene: LINC00478
gene synonym: C21orf34; C21orf35; FLJ38295
product: long intergenic non-protein coding RNA 478, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_244276.1
SIO_010081: LINC00478
so part of: LINC00478
location: join(17791722..17792061,17859810..17859858,17909699..17909759,17979314..17979461)
location: region:17791722-17979461:1
so has part: feature:17791722-17792061:1:exon
so has part: feature:17859810-17859858:1:exon
so has part: feature:17909699-17909759:1:exon
so has part: feature:17979314-17979461:1:exon

position:17791722:1
position: 17791722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17791722-17792061:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17859810-17859858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17909699-17909759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17979314-17979461:1:exon

LINC00478
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf34
alternative label: C21orf35
alternative label: FLJ38295
gene: LINC00478
gene synonym: C21orf34; C21orf35; FLJ38295
product: long intergenic non-protein coding RNA 478, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_244280.1
SIO_010081: LINC00478
so part of: LINC00478
location: join(17907329..17908029,17909699..17909759,17979314..17979461)
location: region:17907329-17979461:1
so has part: feature:17907329-17908029:1:exon
so has part: feature:17909699-17909759:1:exon
so has part: feature:17979314-17979461:1:exon

position:17907329:1
position: 17907329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17907329-17908029:1:exon

position:17908029:1
position: 17908029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17909699-17909759:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17979314-17979461:1:exon

MIR99A
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: MIRN99A
gene: MIR99A
gene synonym: MIRN99A
note: microRNA 99a; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 17911409..17911489
location: region:17911409-17911489:1
so has part: feature:17911409-17911489:1:exon
subclass of: SO_0000571

407055
type: Gene
SIO_000068: ncbigene

HGNC:31650
type: HGNC
SIO_000068: hgnc

614509
type: OMIM
SIO_000068: omim

MI0000101
type: miRBase
SIO_000068: mirbase

position:17911409:1
position: 17911409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17911489:1
position: 17911489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17911409-17911489:1:exon

MIR99A
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 9606
alternative label: MIRN99A
gene: MIR99A
gene synonym: MIRN99A
product: microRNA 99a
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_029514.1
SIO_010081: MIR99A
subclass of: SO_0000673
so part of: MIR99A
location: 17911409..17911489
location: region:17911409-17911489:1
so has part: feature:17911409-17911489:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17911409-17911489:1:exon

MIR99A
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
alternative label: MIRN99A
nc RNA class: miRNA
gene: MIR99A
gene synonym: MIRN99A
product: hsa-miR-99a-5p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR99A
subclass of: SO_0000673
so part of: MIR99A
location: 17911421..17911442
location: region:17911421-17911442:1
so has part: feature:17911421-17911442:1:exon

MIMAT0000097
type: miRBase
SIO_000068: mirbase

position:17911421:1
position: 17911421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17911442:1
position: 17911442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17911421-17911442:1:exon

MIR99A
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
alternative label: MIRN99A
nc RNA class: miRNA
gene: MIR99A
gene synonym: MIRN99A
product: hsa-miR-99a-3p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR99A
subclass of: SO_0000673
so part of: MIR99A
location: 17911458..17911479
location: region:17911458-17911479:1
so has part: feature:17911458-17911479:1:exon

MIMAT0004511
type: miRBase
SIO_000068: mirbase

position:17911458:1
position: 17911458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17911479:1
position: 17911479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17911458-17911479:1:exon

MIRLET7C
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: hsa-let-7c
alternative label: let-7c
alternative label: LET7C
alternative label: MIRNLET7C
gene: MIRLET7C
gene synonym: hsa-let-7c; let-7c; LET7C; MIRNLET7C
note: microRNA let-7c; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 17912148..17912231
location: region:17912148-17912231:1
so has part: feature:17912148-17912231:1:exon
subclass of: SO_0000571

406885
type: Gene
SIO_000068: ncbigene

HGNC:31480
type: HGNC
SIO_000068: hgnc

612144
type: OMIM
SIO_000068: omim

MI0000064
type: miRBase
SIO_000068: mirbase

position:17912148:1
position: 17912148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17912231:1
position: 17912231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17912148-17912231:1:exon

MIRLET7C
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 9606
alternative label: hsa-let-7c
alternative label: let-7c
alternative label: LET7C
alternative label: MIRNLET7C
gene: MIRLET7C
gene synonym: hsa-let-7c; let-7c; LET7C; MIRNLET7C
product: microRNA let-7c
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_029480.1
SIO_010081: MIRLET7C
subclass of: SO_0000673
so part of: MIRLET7C
location: 17912148..17912231
location: region:17912148-17912231:1
so has part: feature:17912148-17912231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17912148-17912231:1:exon

MIRLET7C
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
alternative label: hsa-let-7c
alternative label: let-7c
alternative label: LET7C
alternative label: MIRNLET7C
nc RNA class: miRNA
gene: MIRLET7C
gene synonym: hsa-let-7c; let-7c; LET7C; MIRNLET7C
product: hsa-let-7c
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIRLET7C
subclass of: SO_0000673
so part of: MIRLET7C
location: 17912158..17912179
location: region:17912158-17912179:1
so has part: feature:17912158-17912179:1:exon

MIMAT0000064
type: miRBase
SIO_000068: mirbase

position:17912158:1
position: 17912158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17912179:1
position: 17912179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17912158-17912179:1:exon

MIR125B2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: MIRN125B2
gene: MIR125B2
gene synonym: MIRN125B2
note: microRNA 125b-2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 17962557..17962645
location: region:17962557-17962645:1
so has part: feature:17962557-17962645:1:exon
subclass of: SO_0000571

406912
type: Gene
SIO_000068: ncbigene

HGNC:31507
type: HGNC
SIO_000068: hgnc

610105
type: OMIM
SIO_000068: omim

MI0000470
type: miRBase
SIO_000068: mirbase

position:17962557:1
position: 17962557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17962645:1
position: 17962645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17962557-17962645:1:exon

MIR125B2
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 9606
alternative label: MIRN125B2
gene: MIR125B2
gene synonym: MIRN125B2
product: microRNA 125b-2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_029694.1
SIO_010081: MIR125B2
subclass of: SO_0000673
so part of: MIR125B2
location: 17962557..17962645
location: region:17962557-17962645:1
so has part: feature:17962557-17962645:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17962557-17962645:1:exon

MIR125B2
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
alternative label: MIRN125B2
nc RNA class: miRNA
gene: MIR125B2
gene synonym: MIRN125B2
product: hsa-miR-125b-5p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR125B2
subclass of: SO_0000673
so part of: MIR125B2
location: 17962573..17962594
location: region:17962573-17962594:1
so has part: feature:17962573-17962594:1:exon

MIMAT0000423
type: miRBase
SIO_000068: mirbase

position:17962573:1
position: 17962573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17962594:1
position: 17962594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17962573-17962594:1:exon

MIR125B2
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
alternative label: MIRN125B2
nc RNA class: miRNA
gene: MIR125B2
gene synonym: MIRN125B2
product: hsa-miR-125b-2-3p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR125B2
subclass of: SO_0000673
so part of: MIR125B2
location: 17962610..17962631
location: region:17962610-17962631:1
so has part: feature:17962610-17962631:1:exon

MIMAT0004603
type: miRBase
SIO_000068: mirbase

position:17962610:1
position: 17962610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17962631:1
position: 17962631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17962610-17962631:1:exon

LOC101927771
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC101927771
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 18003271..18012654
location: region:18003271-18012654:1
so has part: feature:18003271-18012654:1:exon

101927771
type: Gene
SIO_000068: ncbigene

position:18003271:1
position: 18003271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18012654:1
position: 18012654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18003271-18012654:1:exon

LOC101927771
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC101927771
product: uncharacterized LOC101927771
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_244294.1
SIO_010081: LOC101927771
so part of: LOC101927771
location: join(18003271..18003291,18003760..18003808,18012549..18012654)
location: region:18003271-18012654:1
so has part: feature:18003271-18003291:1:exon
so has part: feature:18003760-18003808:1:exon
so has part: feature:18012549-18012654:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18003271-18003291:1:exon

position:18003291:1
position: 18003291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18003760-18003808:1:exon

position:18003760:1
position: 18003760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18003808:1
position: 18003808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18012549-18012654:1:exon

position:18012549:1
position: 18012549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NEK4P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: NEK4P1
note: NIMA-related kinase 4 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(18582786..18583674)
location: region:18582786-18583674:-1
so has part: feature:18582786-18583674:-1:exon

100421718
type: Gene
SIO_000068: ncbigene

HGNC:39649
type: HGNC
SIO_000068: hgnc

position:18582786:-1
position: 18582786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18583674:-1
position: 18583674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18582786-18583674:-1:exon

C21orf37
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: C21orf37
note: chromosome 21 open reading frame 37; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 18811208..>18821503
location: region:18811208-18821503:1
so has part: feature:18811208-18821503:1:exon

100505929
type: Gene
SIO_000068: ncbigene

HGNC:1277
type: HGNC
SIO_000068: hgnc

position:18811208:1
position: 18811208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18821503:1
position: 18821503
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18811208-18821503:1:exon

C21orf37
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: C21orf37
product: chromosome 21 open reading frame 37, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_037585.1
SIO_010081: C21orf37
so part of: C21orf37
location: join(18811208..18811315,18813992..18814161,18816401..18816518,18821183..>18821503)
location: region:18811208-18821503:1
so has part: feature:18811208-18811315:1:exon
so has part: feature:18813992-18814161:1:exon
so has part: feature:18816401-18816518:1:exon
so has part: feature:18821183-18821503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18811208-18811315:1:exon

position:18811315:1
position: 18811315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18813992-18814161:1:exon

position:18813992:1
position: 18813992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18814161:1
position: 18814161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18816401-18816518:1:exon

position:18816401:1
position: 18816401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18816518:1
position: 18816518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:18821183-18821503:1:exon

position:18821183:1
position: 18821183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C21orf37
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: C21orf37
product: chromosome 21 open reading frame 37, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_037586.1
SIO_010081: C21orf37
so part of: C21orf37
location: join(18811208..18811315,18813992..18814161,18816401..18816518,18821189..>18821503)
location: region:18811208-18821503:1
so has part: feature:18811208-18811315:1:exon
so has part: feature:18813992-18814161:1:exon
so has part: feature:18816401-18816518:1:exon
so has part: feature:18821189-18821503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18811208-18811315:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18813992-18814161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18816401-18816518:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18821189-18821503:1:exon

position:18821189:1
position: 18821189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAG27
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: TRNAG27
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(18827107..18827177)
location: region:18827107-18827177:-1
so has part: feature:18827107-18827177:-1:exon
subclass of: SO_0000663

100189284
type: Gene
SIO_000068: ncbigene

HGNC:34850
type: HGNC
SIO_000068: hgnc

position:18827107:-1
position: 18827107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18827177:-1
position: 18827177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18827107-18827177:-1:exon

TRNAG27
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9606
gene: TRNAG27
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine 27 (anticodon GCC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(18827143..18827145),aa:Gly, seq:gcc)
SIO_010081: TRNAG27
subclass of: SO_0000673
so part of: TRNAG27
location: complement(18827107..18827177)
location: region:18827107-18827177:-1
so has part: feature:18827107-18827177:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18827107-18827177:-1:exon

RPL39P40
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: RPL39_21_1719
gene: RPL39P40
gene synonym: RPL39_21_1719
note: ribosomal protein L39 pseudogene 40; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(18872997..18873116)
location: region:18872997-18873116:-1
so has part: feature:18872997-18873116:-1:exon

100271531
type: Gene
SIO_000068: ncbigene

HGNC:35823
type: HGNC
SIO_000068: hgnc

position:18872997:-1
position: 18872997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18873116:-1
position: 18873116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18872997-18873116:-1:exon

CXADR
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CAR
alternative label: CAR4/6
alternative label: HCAR
gene: CXADR
gene synonym: CAR; CAR4/6; HCAR
note: coxsackie virus and adenovirus receptor; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 18885224..18965897
location: region:18885224-18965897:1
so has part: feature:18885224-18965897:1:exon
subclass of: SO_0000010

1525
type: Gene
SIO_000068: ncbigene

HGNC:2559
type: HGNC
SIO_000068: hgnc

11804
type: HPRD
SIO_000068: hprd

602621
type: OMIM
SIO_000068: omim

position:18885224:1
position: 18885224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18965897:1
position: 18965897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18885224-18965897:1:exon

CXADR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CAR
alternative label: CAR4/6
alternative label: HCAR
gene: CXADR
gene synonym: CAR; CAR4/6; HCAR
product: coxsackie virus and adenovirus receptor, transcript variant 5
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001207066.1
SIO_010081: CXADR
subclass of: SO_0000673
so part of: CXADR
location: join(18885224..18885490,18919345..18919511,18924067..18924271,18931294..18931449,18933020..18933142,18933656..18933794,18937746..18937929,18965470..18965897)
location: region:18885224-18965897:1
so has part: feature:18885224-18885490:1:exon
so has part: feature:18919345-18919511:1:exon
so has part: feature:18924067-18924271:1:exon
so has part: feature:18931294-18931449:1:exon
so has part: feature:18933020-18933142:1:exon
so has part: feature:18933656-18933794:1:exon
so has part: feature:18937746-18937929:1:exon
so has part: feature:18965470-18965897:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18885224-18885490:1:exon

position:18885490:1
position: 18885490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18919345-18919511:1:exon

position:18919345:1
position: 18919345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18919511:1
position: 18919511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18924067-18924271:1:exon

position:18924067:1
position: 18924067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18924271:1
position: 18924271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:18931294-18931449:1:exon

position:18931294:1
position: 18931294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18931449:1
position: 18931449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:18933020-18933142:1:exon

position:18933020:1
position: 18933020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18933142:1
position: 18933142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:18933656-18933794:1:exon

position:18933656:1
position: 18933656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18933794:1
position: 18933794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:18937746-18937929:1:exon

position:18937746:1
position: 18937746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18937929:1
position: 18937929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:18965470-18965897:1:exon

position:18965470:1
position: 18965470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CXADR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CAR
alternative label: CAR4/6
alternative label: HCAR
gene: CXADR
gene synonym: CAR; CAR4/6; HCAR
product: coxsackie virus and adenovirus receptor, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001338.4
SIO_010081: CXADR
subclass of: SO_0000673
so part of: CXADR
location: join(18885224..18885490,18919345..18919511,18924067..18924271,18931294..18931449,18933020..18933142,18933656..18933794,18937746..18942429)
location: region:18885224-18942429:1
so has part: feature:18885224-18885490:1:exon
so has part: feature:18919345-18919511:1:exon
so has part: feature:18924067-18924271:1:exon
so has part: feature:18931294-18931449:1:exon
so has part: feature:18933020-18933142:1:exon
so has part: feature:18933656-18933794:1:exon
so has part: feature:18937746-18942429:1:exon

position:18942429:1
position: 18942429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18885224-18885490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18919345-18919511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18924067-18924271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18931294-18931449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18933020-18933142:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:18933656-18933794:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18937746-18942429:1:exon

CXADR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CAR
alternative label: CAR4/6
alternative label: HCAR
gene: CXADR
gene synonym: CAR; CAR4/6; HCAR
product: coxsackie virus and adenovirus receptor, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001207063.1
SIO_010081: CXADR
subclass of: SO_0000673
so part of: CXADR
location: join(18885224..18885490,18919345..18919511,18924067..18924271,18931294..18931449,18937746..18942429)
location: region:18885224-18942429:1
so has part: feature:18885224-18885490:1:exon
so has part: feature:18919345-18919511:1:exon
so has part: feature:18924067-18924271:1:exon
so has part: feature:18931294-18931449:1:exon
so has part: feature:18937746-18942429:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18885224-18885490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18919345-18919511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18924067-18924271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18931294-18931449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18937746-18942429:1:exon

CXADR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CAR
alternative label: CAR4/6
alternative label: HCAR
gene: CXADR
gene synonym: CAR; CAR4/6; HCAR
product: coxsackie virus and adenovirus receptor, transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001207064.1
SIO_010081: CXADR
subclass of: SO_0000673
so part of: CXADR
location: join(18885224..18885490,18919345..18919511,18924067..18924271,18937746..18942429)
location: region:18885224-18942429:1
so has part: feature:18885224-18885490:1:exon
so has part: feature:18919345-18919511:1:exon
so has part: feature:18924067-18924271:1:exon
so has part: feature:18937746-18942429:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18885224-18885490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18919345-18919511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18924067-18924271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18937746-18942429:1:exon

CXADR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CAR
alternative label: CAR4/6
alternative label: HCAR
gene: CXADR
gene synonym: CAR; CAR4/6; HCAR
product: coxsackie virus and adenovirus receptor, transcript variant 4
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001207065.1
SIO_010081: CXADR
subclass of: SO_0000673
so part of: CXADR
location: join(18885224..18885490,18919345..18919511,18937746..18942429)
location: region:18885224-18942429:1
so has part: feature:18885224-18885490:1:exon
so has part: feature:18919345-18919511:1:exon
so has part: feature:18937746-18942429:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18885224-18885490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18919345-18919511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18937746-18942429:1:exon

CXADR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CAR
alternative label: CAR4/6
alternative label: HCAR
gene: CXADR
gene synonym: CAR; CAR4/6; HCAR
product: coxsackie virus and adenovirus receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 51 ESTs, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005260928.1
SIO_010081: CXADR
subclass of: SO_0000673
so part of: CXADR
location: join(18885334..18885490,18919345..18919511,18924067..18924271,18931294..18931449,18933656..18933794,18937746..18942418)
location: region:18885334-18942418:1
so has part: feature:18885334-18885490:1:exon
so has part: feature:18919345-18919511:1:exon
so has part: feature:18924067-18924271:1:exon
so has part: feature:18931294-18931449:1:exon
so has part: feature:18933656-18933794:1:exon
so has part: feature:18937746-18942418:1:exon

position:18885334:1
position: 18885334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18942418:1
position: 18942418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18885334-18885490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18919345-18919511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18924067-18924271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18931294-18931449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18933656-18933794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:18937746-18942418:1:exon

CXADR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CAR
alternative label: CAR4/6
alternative label: HCAR
gene: CXADR
gene synonym: CAR; CAR4/6; HCAR
note: isoform 5 precursor is encoded by transcript variant 5; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: coxsackievirus and adenovirus receptor isoform 5 precursor
translation: MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSDSQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSNKAGLIAGAIIGTLLALALIGLIIFCCRKKRREEKYEKEVHHDIREDVPPPKSRTSTARSYIGSNHSSLGSMSPSNMEGYSKTQYNQVPSEDFERTPQSPTLPPAKFKYPYKTDGITVV
SIO_010081: CXADR
subclass of: SO_0000673
so part of: CXADR
location: join(18885448..18885490,18919345..18919511,18924067..18924271,18931294..18931449,18933020..18933142,18933656..18933794,18937746..18937929,18965470..18965511)
location: region:18885448-18965511:1
so has part: feature:18885448-18885490:1:exon
so has part: feature:18919345-18919511:1:exon
so has part: feature:18924067-18924271:1:exon
so has part: feature:18931294-18931449:1:exon
so has part: feature:18933020-18933142:1:exon
so has part: feature:18933656-18933794:1:exon
so has part: feature:18937746-18937929:1:exon
so has part: feature:18965470-18965511:1:exon

NP_001193995.1
type: Protein
SIO_000068: ncbiprotein

CCDS56204.1
type: CCDS
SIO_000068: ccds

position:18885448:1
position: 18885448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18965511:1
position: 18965511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18885448-18885490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18919345-18919511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18924067-18924271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18931294-18931449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18933020-18933142:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:18933656-18933794:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18937746-18937929:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:18965470-18965511:1:exon

CXADR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CAR
alternative label: CAR4/6
alternative label: HCAR
gene: CXADR
gene synonym: CAR; CAR4/6; HCAR
note: isoform 1 precursor is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: coxsackievirus and adenovirus receptor isoform 1 precursor
translation: MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSDSQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSNKAGLIAGAIIGTLLALALIGLIIFCCRKKRREEKYEKEVHHDIREDVPPPKSRTSTARSYIGSNHSSLGSMSPSNMEGYSKTQYNQVPSEDFERTPQSPTLPPAKVAAPNLSRMGAIPVMIPAQSKDGSIV
SIO_010081: CXADR
subclass of: SO_0000673
so part of: CXADR
location: join(18885448..18885490,18919345..18919511,18924067..18924271,18931294..18931449,18933020..18933142,18933656..18933794,18937746..18938010)
location: region:18885448-18938010:1
so has part: feature:18885448-18885490:1:exon
so has part: feature:18919345-18919511:1:exon
so has part: feature:18924067-18924271:1:exon
so has part: feature:18931294-18931449:1:exon
so has part: feature:18933020-18933142:1:exon
so has part: feature:18933656-18933794:1:exon
so has part: feature:18937746-18938010:1:exon

NP_001329.1
type: Protein
SIO_000068: ncbiprotein

CCDS33519.1
type: CCDS
SIO_000068: ccds

position:18938010:1
position: 18938010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18885448-18885490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18919345-18919511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18924067-18924271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18931294-18931449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18933020-18933142:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:18933656-18933794:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18937746-18938010:1:exon

CXADR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CAR
alternative label: CAR4/6
alternative label: HCAR
gene: CXADR
gene synonym: CAR; CAR4/6; HCAR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coxsackievirus and adenovirus receptor isoform X1
translation: MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSDSQKMPTSWLAASNKAGLIAGAIIGTLLALALIGLIIFCCRKKRREEKYEKEVHHDIREDVPPPKSRTSTARSYIGSNHSSLGSMSPSNMEGYSKTQYNQVPSEDFERTPQSPTLPPAKVAAPNLSRMGAIPVMIPAQSKDGSIV
SIO_010081: CXADR
subclass of: SO_0000673
so part of: CXADR
location: join(18885448..18885490,18919345..18919511,18924067..18924271,18931294..18931449,18933656..18933794,18937746..18938010)
location: region:18885448-18938010:1
so has part: feature:18885448-18885490:1:exon
so has part: feature:18919345-18919511:1:exon
so has part: feature:18924067-18924271:1:exon
so has part: feature:18931294-18931449:1:exon
so has part: feature:18933656-18933794:1:exon
so has part: feature:18937746-18938010:1:exon

XP_005260985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18885448-18885490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18919345-18919511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18924067-18924271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18931294-18931449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18933656-18933794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:18937746-18938010:1:exon

CXADR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CAR
alternative label: CAR4/6
alternative label: HCAR
gene: CXADR
gene synonym: CAR; CAR4/6; HCAR
note: isoform 2 precursor is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: coxsackievirus and adenovirus receptor isoform 2 precursor
translation: MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSDSQKMPTSWLAGKMCHLQRAVRPLPEATSAVIIHPWGPCLLPTWKDIPRLSITKYQVKTLNALLRVRLSHLLR
SIO_010081: CXADR
subclass of: SO_0000673
so part of: CXADR
location: join(18885448..18885490,18919345..18919511,18924067..18924271,18931294..18931449,18937746..18937933)
location: region:18885448-18937933:1
so has part: feature:18885448-18885490:1:exon
so has part: feature:18919345-18919511:1:exon
so has part: feature:18924067-18924271:1:exon
so has part: feature:18931294-18931449:1:exon
so has part: feature:18937746-18937933:1:exon

NP_001193992.1
type: Protein
SIO_000068: ncbiprotein

CCDS56205.1
type: CCDS
SIO_000068: ccds

position:18937933:1
position: 18937933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18885448-18885490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18919345-18919511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18924067-18924271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18931294-18931449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18937746-18937933:1:exon

CXADR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CAR
alternative label: CAR4/6
alternative label: HCAR
gene: CXADR
gene synonym: CAR; CAR4/6; HCAR
note: isoform 3 precursor is encoded by transcript variant 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: coxsackievirus and adenovirus receptor isoform 3 precursor
translation: MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLGKMCHLQRAVRPLPEATSAVIIHPWGPCLLPTWKDIPRLSITKYQVKTLNALLRVRLSHLLR
SIO_010081: CXADR
subclass of: SO_0000673
so part of: CXADR
location: join(18885448..18885490,18919345..18919511,18924067..18924271,18937746..18937933)
location: region:18885448-18937933:1
so has part: feature:18885448-18885490:1:exon
so has part: feature:18919345-18919511:1:exon
so has part: feature:18924067-18924271:1:exon
so has part: feature:18937746-18937933:1:exon

NP_001193993.1
type: Protein
SIO_000068: ncbiprotein

CCDS56206.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:18885448-18885490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18919345-18919511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18924067-18924271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18937746-18937933:1:exon

CXADR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CAR
alternative label: CAR4/6
alternative label: HCAR
gene: CXADR
gene synonym: CAR; CAR4/6; HCAR
note: isoform 4 precursor is encoded by transcript variant 4; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: coxsackievirus and adenovirus receptor isoform 4 precursor
translation: MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVGRCATSKEPYVHCQKLHRQ
SIO_010081: CXADR
subclass of: SO_0000673
so part of: CXADR
location: join(18885448..18885490,18919345..18919511,18937746..18937805)
location: region:18885448-18937805:1
so has part: feature:18885448-18885490:1:exon
so has part: feature:18919345-18919511:1:exon
so has part: feature:18937746-18937805:1:exon

NP_001193994.1
type: Protein
SIO_000068: ncbiprotein

CCDS56207.1
type: CCDS
SIO_000068: ccds

position:18937805:1
position: 18937805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18885448-18885490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18919345-18919511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18937746-18937805:1:exon

BTF3L4P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: BTF3L4P1
note: basic transcription factor 3-like 4 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(18889252..18891379)
location: region:18889252-18891379:-1
so has part: feature:18889252-18891379:-1:exon

100505945
type: Gene
SIO_000068: ncbigene

HGNC:39645
type: HGNC
SIO_000068: hgnc

position:18889252:-1
position: 18889252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18891379:-1
position: 18891379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18889252-18891379:-1:exon

BTG3
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: ANA
alternative label: TOB5
alternative label: TOB55
alternative label: TOFA
gene: BTG3
gene synonym: ANA; TOB5; TOB55; TOFA
note: BTG family, member 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(18965968..18985268)
location: region:18965968-18985268:-1
so has part: feature:18965968-18985268:-1:exon
subclass of: SO_0000010

10950
type: Gene
SIO_000068: ncbigene

HGNC:1132
type: HGNC
SIO_000068: hgnc

10415
type: HPRD
SIO_000068: hprd

605674
type: OMIM
SIO_000068: omim

position:18965968:-1
position: 18965968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18985268:-1
position: 18985268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18965968-18985268:-1:exon

BTG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ANA
alternative label: TOB5
alternative label: TOB55
alternative label: TOFA
gene: BTG3
gene synonym: ANA; TOB5; TOB55; TOFA
product: BTG family, member 3, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_006806.4
SIO_010081: BTG3
subclass of: SO_0000673
so part of: BTG3
location: complement(join(18965968..18966650,18970935..18971142,18977178..18977315,18981290..18981470,18985017..18985268))
location: region:18965968-18985268:-1
so has part: feature:18985017-18985268:-1:exon
so has part: feature:18981290-18981470:-1:exon
so has part: feature:18977178-18977315:-1:exon
so has part: feature:18970935-18971142:-1:exon
so has part: feature:18965968-18966650:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18985017-18985268:-1:exon

position:18985017:-1
position: 18985017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18981290-18981470:-1:exon

position:18981290:-1
position: 18981290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18981470:-1
position: 18981470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18977178-18977315:-1:exon

position:18977178:-1
position: 18977178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18977315:-1
position: 18977315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:18970935-18971142:-1:exon

position:18970935:-1
position: 18970935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18971142:-1
position: 18971142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:18965968-18966650:-1:exon

position:18966650:-1
position: 18966650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BTG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ANA
alternative label: TOB5
alternative label: TOB55
alternative label: TOFA
gene: BTG3
gene synonym: ANA; TOB5; TOB55; TOFA
product: BTG family, member 3, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001130914.1
SIO_010081: BTG3
subclass of: SO_0000673
so part of: BTG3
location: complement(join(18965968..18966650,18970935..18971142,18976463..18976594,18977178..18977315,18981290..18981470,18985017..18985268))
location: region:18965968-18985268:-1
so has part: feature:18985017-18985268:-1:exon
so has part: feature:18981290-18981470:-1:exon
so has part: feature:18977178-18977315:-1:exon
so has part: feature:18976463-18976594:-1:exon
so has part: feature:18970935-18971142:-1:exon
so has part: feature:18965968-18966650:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18985017-18985268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18981290-18981470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18977178-18977315:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18976463-18976594:-1:exon

position:18976463:-1
position: 18976463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18976594:-1
position: 18976594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:18970935-18971142:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:18965968-18966650:-1:exon

BTG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ANA
alternative label: TOB5
alternative label: TOB55
alternative label: TOFA
gene: BTG3
gene synonym: ANA; TOB5; TOB55; TOFA
note: isoform b is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: protein BTG3 isoform b
translation: MKNEIAAVVFFFTRLVRKHDKLKKEAVERFAEKLTLILQEKYKNHWYPEKPSKGQAYRCIRVNKFQRVDPDVLKACENSCILYSDLGLPKELTLWVDPCEVCCRYGEKNNAFIVASFENKDENKDEISRKVTRALDKVTSDYHSGSSSSDEETSKEMEVKPSSVTAAASPVYQISELIFPPLPMWHPLPRKKPGMYRGNGHQNHYPPPVPFGYPNQGRKNKPYRPIPVTWVPPPGMHCDRNHWINPHMLAPH
SIO_010081: BTG3
subclass of: SO_0000673
so part of: BTG3
location: complement(join(18966411..18966650,18970935..18971142,18977178..18977315,18981290..18981462))
location: region:18966411-18981462:-1
so has part: feature:18981290-18981462:-1:exon
so has part: feature:18977178-18977315:-1:exon
so has part: feature:18970935-18971142:-1:exon
so has part: feature:18966411-18966650:-1:exon

NP_006797.3
type: Protein
SIO_000068: ncbiprotein

CCDS13569.1
type: CCDS
SIO_000068: ccds

position:18966411:-1
position: 18966411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18981462:-1
position: 18981462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18981290-18981462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18977178-18977315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18970935-18971142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18966411-18966650:-1:exon

BTG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ANA
alternative label: TOB5
alternative label: TOB55
alternative label: TOFA
gene: BTG3
gene synonym: ANA; TOB5; TOB55; TOFA
note: isoform a is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: protein BTG3 isoform a
translation: MKNEIAAVVFFFTRLVRKHDKLKKEAVERFAEKLTLILQEKYKNHWYPEKPSKGQAYRCIRVNKFQRVDPDVLKACENSCILYSDLGLPKELTLWVDPCEVCCRRDGVSPCWPDCSQTPDLVIRPPWPPKALDYRREPLRPASSFLIMYGEKNNAFIVASFENKDENKDEISRKVTRALDKVTSDYHSGSSSSDEETSKEMEVKPSSVTAAASPVYQISELIFPPLPMWHPLPRKKPGMYRGNGHQNHYPPPVPFGYPNQGRKNKPYRPIPVTWVPPPGMHCDRNHWINPHMLAPH
SIO_010081: BTG3
subclass of: SO_0000673
so part of: BTG3
location: complement(join(18966411..18966650,18970935..18971142,18976463..18976594,18977178..18977315,18981290..18981462))
location: region:18966411-18981462:-1
so has part: feature:18981290-18981462:-1:exon
so has part: feature:18977178-18977315:-1:exon
so has part: feature:18976463-18976594:-1:exon
so has part: feature:18970935-18971142:-1:exon
so has part: feature:18966411-18966650:-1:exon

NP_001124386.1
type: Protein
SIO_000068: ncbiprotein

CCDS46636.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:18981290-18981462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18977178-18977315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18976463-18976594:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18970935-18971142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18966411-18966650:-1:exon

C21orf91-OT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: D21S2089E
alternative label: NCRNA00285
gene: C21orf91-OT1
gene synonym: D21S2089E; NCRNA00285
note: C21orf91 overlapping transcript 1 (non-protein coding); Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(<19149721..19164826)
location: region:19149721-19164826:-1
so has part: feature:19149721-19164826:-1:exon

246312
type: Gene
SIO_000068: ncbigene

HGNC:16729
type: HGNC
SIO_000068: hgnc

position:19149721:-1
position: 19149721
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:19164826:-1
position: 19164826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19149721-19164826:-1:exon

C21orf91-OT1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: D21S2089E
alternative label: NCRNA00285
gene: C21orf91-OT1
gene synonym: D21S2089E; NCRNA00285
product: C21orf91 overlapping transcript 1 (non-protein coding), transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_038870.1
SIO_010081: C21orf91-OT1
so part of: C21orf91-OT1
location: complement(join(<19149721..19149936,19159345..19159527,19164794..19164826))
location: region:19149721-19164826:-1
so has part: feature:19164794-19164826:-1:exon
so has part: feature:19159345-19159527:-1:exon
so has part: feature:19149721-19149936:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19164794-19164826:-1:exon

position:19164794:-1
position: 19164794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19159345-19159527:-1:exon

position:19159345:-1
position: 19159345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19159527:-1
position: 19159527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19149721-19149936:-1:exon

position:19149936:-1
position: 19149936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C21orf91-OT1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: D21S2089E
alternative label: NCRNA00285
gene: C21orf91-OT1
gene synonym: D21S2089E; NCRNA00285
product: C21orf91 overlapping transcript 1 (non-protein coding), transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_038871.1
SIO_010081: C21orf91-OT1
so part of: C21orf91-OT1
location: complement(join(<19149721..19149936,19157865..19157929,19159345..19159527,19164794..19164826))
location: region:19149721-19164826:-1
so has part: feature:19164794-19164826:-1:exon
so has part: feature:19159345-19159527:-1:exon
so has part: feature:19157865-19157929:-1:exon
so has part: feature:19149721-19149936:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19164794-19164826:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19159345-19159527:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19157865-19157929:-1:exon

position:19157865:-1
position: 19157865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19157929:-1
position: 19157929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19149721-19149936:-1:exon

C21orf91
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: C21orf14
alternative label: C21orf38
alternative label: CSSG1
alternative label: EURL
alternative label: YG81
gene: C21orf91
gene synonym: C21orf14; C21orf38; CSSG1; EURL; YG81
note: chromosome 21 open reading frame 91; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(19161284..19191703)
location: region:19161284-19191703:-1
so has part: feature:19161284-19191703:-1:exon
subclass of: SO_0000010

54149
type: Gene
SIO_000068: ncbigene

HGNC:16459
type: HGNC
SIO_000068: hgnc

position:19161284:-1
position: 19161284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19191703:-1
position: 19191703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19161284-19191703:-1:exon

C21orf91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: C21orf14
alternative label: C21orf38
alternative label: CSSG1
alternative label: EURL
alternative label: YG81
gene: C21orf91
gene synonym: C21orf14; C21orf38; CSSG1; EURL; YG81
product: chromosome 21 open reading frame 91, transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001100421.1
SIO_010081: C21orf91
subclass of: SO_0000673
so part of: C21orf91
location: complement(join(19161284..19165898,19168899..19169435,19190509..19190642,19191620..19191703))
location: region:19161284-19191703:-1
so has part: feature:19191620-19191703:-1:exon
so has part: feature:19190509-19190642:-1:exon
so has part: feature:19168899-19169435:-1:exon
so has part: feature:19161284-19165898:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19191620-19191703:-1:exon

position:19191620:-1
position: 19191620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19190509-19190642:-1:exon

position:19190509:-1
position: 19190509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19190642:-1
position: 19190642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19168899-19169435:-1:exon

position:19168899:-1
position: 19168899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19169435:-1
position: 19169435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19161284-19165898:-1:exon

position:19165898:-1
position: 19165898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C21orf91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: C21orf14
alternative label: C21orf38
alternative label: CSSG1
alternative label: EURL
alternative label: YG81
gene: C21orf91
gene synonym: C21orf14; C21orf38; CSSG1; EURL; YG81
product: chromosome 21 open reading frame 91, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_017447.3
SIO_010081: C21orf91
subclass of: SO_0000673
so part of: C21orf91
location: complement(join(19161284..19165895,19167525..19167587,19168899..19169435,19190509..19190642,19191620..19191703))
location: region:19161284-19191703:-1
so has part: feature:19191620-19191703:-1:exon
so has part: feature:19190509-19190642:-1:exon
so has part: feature:19168899-19169435:-1:exon
so has part: feature:19167525-19167587:-1:exon
so has part: feature:19161284-19165895:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19191620-19191703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19190509-19190642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19168899-19169435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19167525-19167587:-1:exon

position:19167525:-1
position: 19167525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19167587:-1
position: 19167587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:19161284-19165895:-1:exon

position:19165895:-1
position: 19165895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C21orf91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: C21orf14
alternative label: C21orf38
alternative label: CSSG1
alternative label: EURL
alternative label: YG81
gene: C21orf91
gene synonym: C21orf14; C21orf38; CSSG1; EURL; YG81
product: chromosome 21 open reading frame 91, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001100420.1
SIO_010081: C21orf91
subclass of: SO_0000673
so part of: C21orf91
location: complement(join(19161284..19165898,19167525..19167587,19168899..19169435,19190509..19190642,19191620..19191703))
location: region:19161284-19191703:-1
so has part: feature:19191620-19191703:-1:exon
so has part: feature:19190509-19190642:-1:exon
so has part: feature:19168899-19169435:-1:exon
so has part: feature:19167525-19167587:-1:exon
so has part: feature:19161284-19165898:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19191620-19191703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19190509-19190642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19168899-19169435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19167525-19167587:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19161284-19165898:-1:exon

C21orf91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: C21orf14
alternative label: C21orf38
alternative label: CSSG1
alternative label: EURL
alternative label: YG81
gene: C21orf91
gene synonym: C21orf14; C21orf38; CSSG1; EURL; YG81
note: isoform 2 is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: protein EURL homolog isoform 2
translation: MNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNIEGVPKSDLLHTKSLRGHKDCFEKYHLIANQGCPRSKLSKSTYEEVKTILSKKINWIVQYAQNKDLDSDSECSKNPQHHLFNFRHKPEEKLLPQFDSQVPKYSAKWIDGSAGGISNCTQRILEQRENTDFGLSMLQDSGATLCRNSVLWPHSHNQAQKKEETISSPEANVQTQHPHYSREELNSMTLGEVEQLNAKLLQQIQVFEELTHQVQEKDSLASQLHVRHVAIEQLLKNCSKLPCLQVGRTGMKSHLPINN
SIO_010081: C21orf91
subclass of: SO_0000673
so part of: C21orf91
location: complement(join(19165732..19165895,19167525..19167587,19168899..19169435,19190509..19190635))
location: region:19165732-19190635:-1
so has part: feature:19190509-19190635:-1:exon
so has part: feature:19168899-19169435:-1:exon
so has part: feature:19167525-19167587:-1:exon
so has part: feature:19165732-19165895:-1:exon

NP_059143.3
type: Protein
SIO_000068: ncbiprotein

CCDS42908.1
type: CCDS
SIO_000068: ccds

position:19165732:-1
position: 19165732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19190635:-1
position: 19190635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19190509-19190635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19168899-19169435:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19167525-19167587:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19165732-19165895:-1:exon

C21orf91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: C21orf14
alternative label: C21orf38
alternative label: CSSG1
alternative label: EURL
alternative label: YG81
gene: C21orf91
gene synonym: C21orf14; C21orf38; CSSG1; EURL; YG81
note: isoform 1 is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: protein EURL homolog isoform 1
translation: MNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNIEGVPKSDLLHTKSLRGHKDCFEKYHLIANQGCPRSKLSKSTYEEVKTILSKKINWIVQYAQNKDLDSDSECSKNPQHHLFNFRHKPEEKLLPQFDSQVPKYSAKWIDGSAGGISNCTQRILEQRENTDFGLSMLQDSGATLCRNSVLWPHSHNQAQKKEETISSPEANVQTQHPHYSREELNSMTLGEVEQLNAKLLQQIQEVFEELTHQVQEKDSLASQLHVRHVAIEQLLKNCSKLPCLQVGRTGMKSHLPINN
SIO_010081: C21orf91
subclass of: SO_0000673
so part of: C21orf91
location: complement(join(19165732..19165898,19167525..19167587,19168899..19169435,19190509..19190635))
location: region:19165732-19190635:-1
so has part: feature:19190509-19190635:-1:exon
so has part: feature:19168899-19169435:-1:exon
so has part: feature:19167525-19167587:-1:exon
so has part: feature:19165732-19165898:-1:exon

NP_001093890.1
type: Protein
SIO_000068: ncbiprotein

CCDS42907.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:19190509-19190635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19168899-19169435:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19167525-19167587:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19165732-19165898:-1:exon

C21orf91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: C21orf14
alternative label: C21orf38
alternative label: CSSG1
alternative label: EURL
alternative label: YG81
gene: C21orf91
gene synonym: C21orf14; C21orf38; CSSG1; EURL; YG81
note: isoform 3 is encoded by transcript variant 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: protein EURL homolog isoform 3
translation: MNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNIEGVPKSDLLHTKSLRGHKDCFEKYHLIANQGCPRSKLSKSTYEEVKTILSKKINWIVQYAQNKDLDSDSECSKNPQHHLFNFRHKPEEKLLPQFDSQVPKYSAKWIDGSAGGISNCTQRILEQRENTDFGLSMLQDSGATLCRNSVLWPHSHNQAQKKEETISSPEANVQTQHPHYSREE
SIO_010081: C21orf91
subclass of: SO_0000673
so part of: C21orf91
location: complement(join(19165897..19165898,19168899..19169435,19190509..19190635))
location: region:19165897-19190635:-1
so has part: feature:19190509-19190635:-1:exon
so has part: feature:19168899-19169435:-1:exon
so has part: feature:19165897-19165898:-1:exon

NP_001093891.1
type: Protein
SIO_000068: ncbiprotein

CCDS42909.1
type: CCDS
SIO_000068: ccds

position:19165897:-1
position: 19165897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19190509-19190635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19168899-19169435:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19165897-19165898:-1:exon

CHODL-AS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: C21orf39
alternative label: NCRNA00157
gene: CHODL-AS1
gene synonym: C21orf39; NCRNA00157
note: CHODL antisense RNA 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(19207989..19257925)
location: region:19207989-19257925:-1
so has part: feature:19207989-19257925:-1:exon

54075
type: Gene
SIO_000068: ncbigene

HGNC:1279
type: HGNC
SIO_000068: hgnc

position:19207989:-1
position: 19207989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19257925:-1
position: 19257925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19207989-19257925:-1:exon

CHODL-AS1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf39
alternative label: NCRNA00157
gene: CHODL-AS1
gene synonym: C21orf39; NCRNA00157
product: CHODL antisense RNA 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_024354.1
SIO_010081: CHODL-AS1
so part of: CHODL-AS1
location: complement(join(19207989..19208143,19212812..19212970,19257779..19257925))
location: region:19207989-19257925:-1
so has part: feature:19257779-19257925:-1:exon
so has part: feature:19212812-19212970:-1:exon
so has part: feature:19207989-19208143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19257779-19257925:-1:exon

position:19257779:-1
position: 19257779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19212812-19212970:-1:exon

position:19212812:-1
position: 19212812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19212970:-1
position: 19212970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19207989-19208143:-1:exon

position:19208143:-1
position: 19208143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPL37P3
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: RL37P
alternative label: RPL37_13_1720
gene: RPL37P3
gene synonym: RL37P; RPL37_13_1720
note: ribosomal protein L37 pseudogene 3; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(19266465..19266824)
location: region:19266465-19266824:-1
so has part: feature:19266465-19266824:-1:exon

378818
type: Gene
SIO_000068: ncbigene

HGNC:17238
type: HGNC
SIO_000068: hgnc

position:19266465:-1
position: 19266465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19266824:-1
position: 19266824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19266465-19266824:-1:exon

CHODL
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: C21orf68
alternative label: MT75
alternative label: PRED12
gene: CHODL
gene synonym: C21orf68; MT75; PRED12
note: chondrolectin; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: <19400190..19639687
location: region:19400190-19639687:1
so has part: feature:19400190-19639687:1:exon
subclass of: SO_0000010

140578
type: Gene
SIO_000068: ncbigene

HGNC:17807
type: HGNC
SIO_000068: hgnc

06261
type: HPRD
SIO_000068: hprd

607247
type: OMIM
SIO_000068: omim

position:19400190:1
position: 19400190
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:19639687:1
position: 19639687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19400190-19639687:1:exon

CHODL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: C21orf68
alternative label: MT75
alternative label: PRED12
gene: CHODL
gene synonym: C21orf68; MT75; PRED12
product: chondrolectin, transcript variant 4
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001204176.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript aligns at 97% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001204176.1
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(<19400190..19400289,19628826..19629135,19629287..19629444,19632517..19632603,19635108..19635210,19638271..19639687)
location: region:19400190-19639687:1
so has part: feature:19400190-19400289:1:exon
so has part: feature:19628826-19629135:1:exon
so has part: feature:19629287-19629444:1:exon
so has part: feature:19632517-19632603:1:exon
so has part: feature:19635108-19635210:1:exon
so has part: feature:19638271-19639687:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19400190-19400289:1:exon

position:19400289:1
position: 19400289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19628826-19629135:1:exon

position:19628826:1
position: 19628826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

position:19629135:1
position: 19629135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19629287-19629444:1:exon

position:19629287:1
position: 19629287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19629444:1
position: 19629444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19632517-19632603:1:exon

position:19632517:1
position: 19632517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19632603:1
position: 19632603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:19635108-19635210:1:exon

position:19635108:1
position: 19635108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19635210:1
position: 19635210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:19638271-19639687:1:exon

position:19638271:1
position: 19638271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHODL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: C21orf68
alternative label: MT75
alternative label: PRED12
gene: CHODL
gene synonym: C21orf68; MT75; PRED12
product: chondrolectin, transcript variant 6
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001204178.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript aligns at 97% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001204178.1
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(<19400190..19400289,19628826..19629135,19629287..19629444,19632517..19632603,19638271..19639687)
location: region:19400190-19639687:1
so has part: feature:19400190-19400289:1:exon
so has part: feature:19628826-19629135:1:exon
so has part: feature:19629287-19629444:1:exon
so has part: feature:19632517-19632603:1:exon
so has part: feature:19638271-19639687:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19400190-19400289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19628826-19629135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19629287-19629444:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19632517-19632603:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19638271-19639687:1:exon

CHODL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: C21orf68
alternative label: MT75
alternative label: PRED12
gene: CHODL
gene synonym: C21orf68; MT75; PRED12
product: chondrolectin, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_024944.2
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(19617150..19617619,19628826..19629135,19629287..19629444,19632517..19632603,19635108..19635210,19638271..19639687)
location: region:19617150-19639687:1
so has part: feature:19617150-19617619:1:exon
so has part: feature:19628826-19629135:1:exon
so has part: feature:19629287-19629444:1:exon
so has part: feature:19632517-19632603:1:exon
so has part: feature:19635108-19635210:1:exon
so has part: feature:19638271-19639687:1:exon

position:19617150:1
position: 19617150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19617150-19617619:1:exon

position:19617619:1
position: 19617619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19628826-19629135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19629287-19629444:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19632517-19632603:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19635108-19635210:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19638271-19639687:1:exon

CHODL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: C21orf68
alternative label: MT75
alternative label: PRED12
gene: CHODL
gene synonym: C21orf68; MT75; PRED12
note: isoform a precursor is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: chondrolectin isoform a precursor
translation: MSRVVSLLLGAALLCGHGAFCRRVVSGQKVCFADFKHPCYKMAYFHELSSRVSFQEARLACESEGGVLLSLENEAEQKLIESMLQNLTKPGTGISDGDFWIGLWRNGDGQTSGACPDLYQWSDGSNSQYRNWYTDEPSCGSEKCVVMYHQPTANPGLGGPYLYQWNDDRCNMKHNYICKYEPEINPTAPVEKPYLTNQPGDTHQNVVVTEAGIIPNLIYVVIPTIPLLLLILVAFGTCCFQMLHKSKGRTKTSPNQSTLWISKSTRKESGMEV
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(19617541..19617619,19628826..19629135,19629287..19629444,19632517..19632603,19635108..19635210,19638271..19638355)
location: region:19617541-19638355:1
so has part: feature:19617541-19617619:1:exon
so has part: feature:19628826-19629135:1:exon
so has part: feature:19629287-19629444:1:exon
so has part: feature:19632517-19632603:1:exon
so has part: feature:19635108-19635210:1:exon
so has part: feature:19638271-19638355:1:exon

NP_079220.2
type: Protein
SIO_000068: ncbiprotein

CCDS13570.1
type: CCDS
SIO_000068: ccds

position:19617541:1
position: 19617541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19638355:1
position: 19638355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19617541-19617619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19628826-19629135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19629287-19629444:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19632517-19632603:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19635108-19635210:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19638271-19638355:1:exon

CHODL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: C21orf68
alternative label: MT75
alternative label: PRED12
gene: CHODL
gene synonym: C21orf68; MT75; PRED12
product: chondrolectin, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001204174.1
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(19618192..19618286,19628826..19629135,19629287..19629444,19632517..19632603,19635108..19635210,19638271..19639687)
location: region:19618192-19639687:1
so has part: feature:19618192-19618286:1:exon
so has part: feature:19628826-19629135:1:exon
so has part: feature:19629287-19629444:1:exon
so has part: feature:19632517-19632603:1:exon
so has part: feature:19635108-19635210:1:exon
so has part: feature:19638271-19639687:1:exon

position:19618192:1
position: 19618192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19618192-19618286:1:exon

position:19618286:1
position: 19618286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19628826-19629135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19629287-19629444:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19632517-19632603:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19635108-19635210:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19638271-19639687:1:exon

CHODL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: C21orf68
alternative label: MT75
alternative label: PRED12
gene: CHODL
gene synonym: C21orf68; MT75; PRED12
note: isoform b is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: chondrolectin isoform b
translation: MTAGSAHSQKVCFADFKHPCYKMAYFHELSSRVSFQEARLACESEGGVLLSLENEAEQKLIESMLQNLTKPGTGISDGDFWIGLWRNGDGQTSGACPDLYQWSDGSNSQYRNWYTDEPSCGSEKCVVMYHQPTANPGLGGPYLYQWNDDRCNMKHNYICKYEPEINPTAPVEKPYLTNQPGDTHQNVVVTEAGIIPNLIYVVIPTIPLLLLILVAFGTCCFQMLHKSKGRTKTSPNQSTLWISKSTRKESGMEV
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(19618265..19618286,19628826..19629135,19629287..19629444,19632517..19632603,19635108..19635210,19638271..19638355)
location: region:19618265-19638355:1
so has part: feature:19618265-19618286:1:exon
so has part: feature:19628826-19629135:1:exon
so has part: feature:19629287-19629444:1:exon
so has part: feature:19632517-19632603:1:exon
so has part: feature:19635108-19635210:1:exon
so has part: feature:19638271-19638355:1:exon

NP_001191103.1
type: Protein
SIO_000068: ncbiprotein

CCDS56208.1
type: CCDS
SIO_000068: ccds

position:19618265:1
position: 19618265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19618265-19618286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19628826-19629135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19629287-19629444:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19632517-19632603:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19635108-19635210:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19638271-19638355:1:exon

CHODL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: C21orf68
alternative label: MT75
alternative label: PRED12
gene: CHODL
gene synonym: C21orf68; MT75; PRED12
product: chondrolectin, transcript variant 3
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001204175.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript aligns at 97% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001204175.1
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(<19628826..19629135,19629287..19629444,19632517..19632603,19635108..19635210,19638271..19639687)
location: region:19628826-19639687:1
so has part: feature:19628826-19629135:1:exon
so has part: feature:19629287-19629444:1:exon
so has part: feature:19632517-19632603:1:exon
so has part: feature:19635108-19635210:1:exon
so has part: feature:19638271-19639687:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19628826-19629135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19629287-19629444:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19632517-19632603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19635108-19635210:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19638271-19639687:1:exon

CHODL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: C21orf68
alternative label: MT75
alternative label: PRED12
gene: CHODL
gene synonym: C21orf68; MT75; PRED12
product: chondrolectin, transcript variant 5
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001204177.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript aligns at 96% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001204177.1
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(<19628826..19629135,19629287..19629444,19632517..19632603,19638271..19639687)
location: region:19628826-19639687:1
so has part: feature:19628826-19629135:1:exon
so has part: feature:19629287-19629444:1:exon
so has part: feature:19632517-19632603:1:exon
so has part: feature:19638271-19639687:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19628826-19629135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19629287-19629444:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19632517-19632603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19638271-19639687:1:exon

CHODL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: C21orf68
alternative label: MT75
alternative label: PRED12
gene: CHODL
gene synonym: C21orf68; MT75; PRED12
note: isoform d is encoded by transcript variant 5; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: chondrolectin isoform d
translation: MAYFHELSSRVSFQEARLACESEGGVLLSLENEAEQKLIESMLQNLTKPGTGISDGDFWIGLWRNGDGQTSGACPDLYQWSDGSNSQYRNWYTDEPSCGSEKCVVMYHQPTANPGLGGPYLYQWNDDRCNMKHNYICKYEPEINPTAPVEKPYLTNQPGDTHQNVVVTEAVKEEQKLVQTSLHCGFQRVPEKKVAWKYNNSLTWFQNFVILDLYKEWHQNNSLEWLEITKDLQDEL
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(19628870..19629135,19629287..19629444,19632517..19632603,19638271..19638470)
location: region:19628870-19638470:1
so has part: feature:19628870-19629135:1:exon
so has part: feature:19629287-19629444:1:exon
so has part: feature:19632517-19632603:1:exon
so has part: feature:19638271-19638470:1:exon

NP_001191106.1
type: Protein
SIO_000068: ncbiprotein

CCDS56210.1
type: CCDS
SIO_000068: ccds

position:19628870:1
position: 19628870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19638470:1
position: 19638470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19628870-19629135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19629287-19629444:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19632517-19632603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19638271-19638470:1:exon

CHODL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: C21orf68
alternative label: MT75
alternative label: PRED12
gene: CHODL
gene synonym: C21orf68; MT75; PRED12
note: isoform d is encoded by transcript variant 6; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: chondrolectin isoform d
translation: MAYFHELSSRVSFQEARLACESEGGVLLSLENEAEQKLIESMLQNLTKPGTGISDGDFWIGLWRNGDGQTSGACPDLYQWSDGSNSQYRNWYTDEPSCGSEKCVVMYHQPTANPGLGGPYLYQWNDDRCNMKHNYICKYEPEINPTAPVEKPYLTNQPGDTHQNVVVTEAVKEEQKLVQTSLHCGFQRVPEKKVAWKYNNSLTWFQNFVILDLYKEWHQNNSLEWLEITKDLQDEL
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(19628870..19629135,19629287..19629444,19632517..19632603,19638271..19638470)
location: region:19628870-19638470:1
so has part: feature:19628870-19629135:1:exon
so has part: feature:19629287-19629444:1:exon
so has part: feature:19632517-19632603:1:exon
so has part: feature:19638271-19638470:1:exon

NP_001191107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19628870-19629135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19629287-19629444:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19632517-19632603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19638271-19638470:1:exon

CHODL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: C21orf68
alternative label: MT75
alternative label: PRED12
gene: CHODL
gene synonym: C21orf68; MT75; PRED12
note: isoform c is encoded by transcript variant 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: chondrolectin isoform c
translation: MAYFHELSSRVSFQEARLACESEGGVLLSLENEAEQKLIESMLQNLTKPGTGISDGDFWIGLWRNGDGQTSGACPDLYQWSDGSNSQYRNWYTDEPSCGSEKCVVMYHQPTANPGLGGPYLYQWNDDRCNMKHNYICKYEPEINPTAPVEKPYLTNQPGDTHQNVVVTEAGIIPNLIYVVIPTIPLLLLILVAFGTCCFQMLHKSKGRTKTSPNQSTLWISKSTRKESGMEV
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(19628870..19629135,19629287..19629444,19632517..19632603,19635108..19635210,19638271..19638355)
location: region:19628870-19638355:1
so has part: feature:19628870-19629135:1:exon
so has part: feature:19629287-19629444:1:exon
so has part: feature:19632517-19632603:1:exon
so has part: feature:19635108-19635210:1:exon
so has part: feature:19638271-19638355:1:exon

NP_001191104.1
type: Protein
SIO_000068: ncbiprotein

CCDS56209.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:19628870-19629135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19629287-19629444:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19632517-19632603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19635108-19635210:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19638271-19638355:1:exon

CHODL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: C21orf68
alternative label: MT75
alternative label: PRED12
gene: CHODL
gene synonym: C21orf68; MT75; PRED12
note: isoform c is encoded by transcript variant 4; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: chondrolectin isoform c
translation: MAYFHELSSRVSFQEARLACESEGGVLLSLENEAEQKLIESMLQNLTKPGTGISDGDFWIGLWRNGDGQTSGACPDLYQWSDGSNSQYRNWYTDEPSCGSEKCVVMYHQPTANPGLGGPYLYQWNDDRCNMKHNYICKYEPEINPTAPVEKPYLTNQPGDTHQNVVVTEAGIIPNLIYVVIPTIPLLLLILVAFGTCCFQMLHKSKGRTKTSPNQSTLWISKSTRKESGMEV
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(19628870..19629135,19629287..19629444,19632517..19632603,19635108..19635210,19638271..19638355)
location: region:19628870-19638355:1
so has part: feature:19628870-19629135:1:exon
so has part: feature:19629287-19629444:1:exon
so has part: feature:19632517-19632603:1:exon
so has part: feature:19635108-19635210:1:exon
so has part: feature:19638271-19638355:1:exon

NP_001191105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19628870-19629135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19629287-19629444:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19632517-19632603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19635108-19635210:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19638271-19638355:1:exon

TMPRSS15
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: ENTK
alternative label: PRSS7
gene: TMPRSS15
gene synonym: ENTK; PRSS7
note: transmembrane protease, serine 15; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(19641433..19775970)
location: region:19641433-19775970:-1
so has part: feature:19641433-19775970:-1:exon
subclass of: SO_0000010

5651
type: Gene
SIO_000068: ncbigene

HGNC:9490
type: HGNC
SIO_000068: hgnc

606635
type: OMIM
SIO_000068: omim

position:19641433:-1
position: 19641433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19775970:-1
position: 19775970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19641433-19775970:-1:exon

TMPRSS15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ENTK
alternative label: PRSS7
gene: TMPRSS15
gene synonym: ENTK; PRSS7
product: transmembrane protease, serine 15
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_002772.2
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_002772.2
SIO_010081: TMPRSS15
subclass of: SO_0000673
so part of: TMPRSS15
location: complement(join(19641433..19642441,19647514..19647653,19651281..19651376,19653357..19653538,19666587..19666761,19666920..19666969,19670051..19670146,19685262..19685394,19687463..19687573,19698749..19698889,19701486..19701611,19704401..19704490,19713730..19713865,19715823..19715973,19716272..19716377,19725220..19725369,19726040..19726180,19732074..19732180,19737457..19737565,19744510..19744641,19751600..19751635,19755944..19756095,19770196..19770263,19770516..19770646,19775795..19775970))
location: region:19641433-19775970:-1
so has part: feature:19775795-19775970:-1:exon
so has part: feature:19770516-19770646:-1:exon
so has part: feature:19770196-19770263:-1:exon
so has part: feature:19755944-19756095:-1:exon
so has part: feature:19751600-19751635:-1:exon
so has part: feature:19744510-19744641:-1:exon
so has part: feature:19737457-19737565:-1:exon
so has part: feature:19732074-19732180:-1:exon
so has part: feature:19726040-19726180:-1:exon
so has part: feature:19725220-19725369:-1:exon
so has part: feature:19716272-19716377:-1:exon
so has part: feature:19715823-19715973:-1:exon
so has part: feature:19713730-19713865:-1:exon
so has part: feature:19704401-19704490:-1:exon
so has part: feature:19701486-19701611:-1:exon
so has part: feature:19698749-19698889:-1:exon
so has part: feature:19687463-19687573:-1:exon
so has part: feature:19685262-19685394:-1:exon
so has part: feature:19670051-19670146:-1:exon
so has part: feature:19666920-19666969:-1:exon
so has part: feature:19666587-19666761:-1:exon
so has part: feature:19653357-19653538:-1:exon
so has part: feature:19651281-19651376:-1:exon
so has part: feature:19647514-19647653:-1:exon
so has part: feature:19641433-19642441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19775795-19775970:-1:exon

position:19775795:-1
position: 19775795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19770516-19770646:-1:exon

position:19770516:-1
position: 19770516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19770646:-1
position: 19770646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19770196-19770263:-1:exon

position:19770196:-1
position: 19770196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19770263:-1
position: 19770263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19755944-19756095:-1:exon

position:19755944:-1
position: 19755944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19756095:-1
position: 19756095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:19751600-19751635:-1:exon

position:19751600:-1
position: 19751600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19751635:-1
position: 19751635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:19744510-19744641:-1:exon

position:19744510:-1
position: 19744510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19744641:-1
position: 19744641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:19737457-19737565:-1:exon

position:19737457:-1
position: 19737457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19737565:-1
position: 19737565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:19732074-19732180:-1:exon

position:19732074:-1
position: 19732074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19732180:-1
position: 19732180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:19726040-19726180:-1:exon

position:19726040:-1
position: 19726040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19726180:-1
position: 19726180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:19725220-19725369:-1:exon

position:19725220:-1
position: 19725220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19725369:-1
position: 19725369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:19716272-19716377:-1:exon

position:19716272:-1
position: 19716272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19716377:-1
position: 19716377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:19715823-19715973:-1:exon

position:19715823:-1
position: 19715823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19715973:-1
position: 19715973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:19713730-19713865:-1:exon

position:19713730:-1
position: 19713730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19713865:-1
position: 19713865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:19704401-19704490:-1:exon

position:19704401:-1
position: 19704401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19704490:-1
position: 19704490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:19701486-19701611:-1:exon

position:19701486:-1
position: 19701486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19701611:-1
position: 19701611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:19698749-19698889:-1:exon

position:19698749:-1
position: 19698749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19698889:-1
position: 19698889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:19687463-19687573:-1:exon

position:19687463:-1
position: 19687463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19687573:-1
position: 19687573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:19685262-19685394:-1:exon

position:19685262:-1
position: 19685262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19685394:-1
position: 19685394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:19670051-19670146:-1:exon

position:19670051:-1
position: 19670051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19670146:-1
position: 19670146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:19666920-19666969:-1:exon

position:19666920:-1
position: 19666920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19666969:-1
position: 19666969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:19666587-19666761:-1:exon

position:19666587:-1
position: 19666587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19666761:-1
position: 19666761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:19653357-19653538:-1:exon

position:19653357:-1
position: 19653357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19653538:-1
position: 19653538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:19651281-19651376:-1:exon

position:19651281:-1
position: 19651281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19651376:-1
position: 19651376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:19647514-19647653:-1:exon

position:19647514:-1
position: 19647514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19647653:-1
position: 19647653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:19641433-19642441:-1:exon

position:19642441:-1
position: 19642441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMPRSS15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ENTK
alternative label: PRSS7
gene: TMPRSS15
gene synonym: ENTK; PRSS7
inference: similar to AA sequence (same species):RefSeq:NP_002763.2
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: enteropeptidase precursor
translation: MGSKRGISSRHHSLSSYEIMFAALFAILVVLCAGLIAVSCLTIKESQRGAALGQSHEARATFKITSGVTYNPNLQDKLSVDFKVLAFDLQQMIDEIFLSSNLKNEYKNSRVLQFENGSIIVVFDLFFAQWVSDENVKEELIQGLEANKSSQLVTFHIDLNSVDILDKLTTTSHLATPGNVSIECLPGSSPCTDALTCIKADLFCDGEVNCPDGSDEDNKMCATVCDGRFLLTGSSGSFQATHYPKPSETSVVCQWIIRVNQGLSIKLSFDDFNTYYTDILDIYEGVGSSKILRASIWETNPGTIRIFSNQVTATFLIESDESDYVGFNATYTAFNSSELNNYEKINCNFEDGFCFWVQDLNDDNEWERIQGSTFSPFTGPNFDHTFGNASGFYISTPTGPGGRQERVGLLSLPLDPTLEPACLSFWYHMYGENVHKLSINISNDQNMEKTVFQKEGNYGDNWNYGQVTLNETVKFKVAFNAFKNKILSDIALDDISLTYGICNGSLYPEPTLVPTPPPELPTDCGGPFELWEPNTTFSSTNFPNSYPNLAFCVWILNAQKGKNIQLHFQEFDLENINDVVEIRDGEEADSLLLAVYTGPGPVKDVFSTTNRMTVLLITNDVLARGGFKANFTTGYHLGIPEPCKADHFQCKNGECVPLVNLCDGHLHCEDGSDEADCVRFFNGTTNNNGLVRFRIQSIWHTACAENWTTQISNDVCQLLGLGSGNSSKPIFSTDGGPFVKLNTAPDGHLILTPSQQCLQDSLIRLQCNHKSCGKKLAAQDITPKIVGGSNAKEGAWPWVVGLYYGGRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPICLPEENQVFPPGRNCSIAGWGTVVYQGTTANILQEADVPLLSNERCQQQMPEYNITENMICAGYEEGGIDSCQGDSGGPLMCQENNRWFLAGVTSFGYKCALPNRPGVYARVSRFTEWIQSFLH
SIO_010081: TMPRSS15
subclass of: SO_0000673
so part of: TMPRSS15
location: complement(join(19642286..19642441,19647514..19647653,19651281..19651376,19653357..19653538,19666587..19666761,19666920..19666969,19670051..19670146,19685262..19685394,19687463..19687573,19698749..19698889,19701486..19701611,19704401..19704490,19713730..19713865,19715823..19715973,19716272..19716377,19725220..19725369,19726040..19726180,19732074..19732180,19737457..19737565,19744510..19744641,19751600..19751635,19755944..19756095,19770196..19770263,19770516..19770646,19775795..19775939))
location: region:19642286-19775939:-1
so has part: feature:19775795-19775939:-1:exon
so has part: feature:19770516-19770646:-1:exon
so has part: feature:19770196-19770263:-1:exon
so has part: feature:19755944-19756095:-1:exon
so has part: feature:19751600-19751635:-1:exon
so has part: feature:19744510-19744641:-1:exon
so has part: feature:19737457-19737565:-1:exon
so has part: feature:19732074-19732180:-1:exon
so has part: feature:19726040-19726180:-1:exon
so has part: feature:19725220-19725369:-1:exon
so has part: feature:19716272-19716377:-1:exon
so has part: feature:19715823-19715973:-1:exon
so has part: feature:19713730-19713865:-1:exon
so has part: feature:19704401-19704490:-1:exon
so has part: feature:19701486-19701611:-1:exon
so has part: feature:19698749-19698889:-1:exon
so has part: feature:19687463-19687573:-1:exon
so has part: feature:19685262-19685394:-1:exon
so has part: feature:19670051-19670146:-1:exon
so has part: feature:19666920-19666969:-1:exon
so has part: feature:19666587-19666761:-1:exon
so has part: feature:19653357-19653538:-1:exon
so has part: feature:19651281-19651376:-1:exon
so has part: feature:19647514-19647653:-1:exon
so has part: feature:19642286-19642441:-1:exon

NP_002763.2
type: Protein
SIO_000068: ncbiprotein

CCDS13571.1
type: CCDS
SIO_000068: ccds

position:19642286:-1
position: 19642286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19775939:-1
position: 19775939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19775795-19775939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19770516-19770646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19770196-19770263:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19755944-19756095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19751600-19751635:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19744510-19744641:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:19737457-19737565:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:19732074-19732180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:19726040-19726180:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:19725220-19725369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:19716272-19716377:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:19715823-19715973:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:19713730-19713865:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:19704401-19704490:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:19701486-19701611:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:19698749-19698889:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:19687463-19687573:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:19685262-19685394:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:19670051-19670146:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:19666920-19666969:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:19666587-19666761:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:19653357-19653538:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:19651281-19651376:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:19647514-19647653:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:19642286-19642441:-1:exon

LOC101927797
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC101927797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(19933583..20132130)
location: region:19933583-20132130:-1
so has part: feature:19933583-20132130:-1:exon

101927797
type: Gene
SIO_000068: ncbigene

position:19933583:-1
position: 19933583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20132130:-1
position: 20132130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19933583-20132130:-1:exon

LOC101927797
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC101927797
product: uncharacterized LOC101927797
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST
transcript id: XR_244295.1
SIO_010081: LOC101927797
so part of: LOC101927797
location: complement(join(19933583..19934009,19961845..19961938,20110242..20110343,20132092..20132130))
location: region:19933583-20132130:-1
so has part: feature:20132092-20132130:-1:exon
so has part: feature:20110242-20110343:-1:exon
so has part: feature:19961845-19961938:-1:exon
so has part: feature:19933583-19934009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20132092-20132130:-1:exon

position:20132092:-1
position: 20132092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:20110242-20110343:-1:exon

position:20110242:-1
position: 20110242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20110343:-1
position: 20110343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19961845-19961938:-1:exon

position:19961845:-1
position: 19961845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19961938:-1
position: 19961938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19933583-19934009:-1:exon

position:19934009:-1
position: 19934009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MIR548X
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: MIR548X
note: microRNA 548x; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(20058408..20058482)
location: region:20058408-20058482:-1
so has part: feature:20058408-20058482:-1:exon
subclass of: SO_0000571

100422920
type: Gene
SIO_000068: ncbigene

HGNC:38248
type: HGNC
SIO_000068: hgnc

MI0014244
type: miRBase
SIO_000068: mirbase

position:20058408:-1
position: 20058408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20058482:-1
position: 20058482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20058408-20058482:-1:exon

MIR548X
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 9606
gene: MIR548X
product: microRNA 548x
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_036166.1
SIO_010081: MIR548X
subclass of: SO_0000673
so part of: MIR548X
location: complement(20058408..20058482)
location: region:20058408-20058482:-1
so has part: feature:20058408-20058482:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20058408-20058482:-1:exon

MIR548X
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: miRNA
gene: MIR548X
product: hsa-miR-548x-3p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR548X
subclass of: SO_0000673
so part of: MIR548X
location: complement(20058418..20058437)
location: region:20058418-20058437:-1
so has part: feature:20058418-20058437:-1:exon

MIMAT0015081
type: miRBase
SIO_000068: mirbase

position:20058418:-1
position: 20058418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20058437:-1
position: 20058437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20058418-20058437:-1:exon

MIR548X
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: miRNA
gene: MIR548X
product: hsa-miR-548x-5p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR548X
subclass of: SO_0000673
so part of: MIR548X
location: complement(20058453..20058475)
location: region:20058453-20058475:-1
so has part: feature:20058453-20058475:-1:exon

MIMAT0022733
type: miRBase
SIO_000068: mirbase

position:20058453:-1
position: 20058453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20058475:-1
position: 20058475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20058453-20058475:-1:exon

PPIAP22
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: PPIA3L
alternative label: PPIAL3
gene: PPIAP22
gene synonym: PPIA3L; PPIAL3
note: peptidylprolyl isomerase A (cyclophilin A) pseudogene 22; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 20230097..20230594
location: region:20230097-20230594:1
so has part: feature:20230097-20230594:1:exon

653214
type: Gene
SIO_000068: ncbigene

HGNC:17236
type: HGNC
SIO_000068: hgnc

position:20230097:1
position: 20230097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20230594:1
position: 20230594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20230097-20230594:1:exon

SLC6A6P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: SLC6A6P
gene: SLC6A6P1
gene synonym: SLC6A6P
note: solute carrier family 6, member 6 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 20616712..20618714
location: region:20616712-20618714:1
so has part: feature:20616712-20618714:1:exon

54019
type: Gene
SIO_000068: ncbigene

HGNC:11053
type: HGNC
SIO_000068: hgnc

position:20616712:1
position: 20616712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20618714:1
position: 20618714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20616712-20618714:1:exon

RPL37P4
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: RL37P2
alternative label: RPL37_10_1721
gene: RPL37P4
gene synonym: RL37P2; RPL37_10_1721
note: ribosomal protein L37 pseudogene 4; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 20966021..20966585
location: region:20966021-20966585:1
so has part: feature:20966021-20966585:1:exon

378819
type: Gene
SIO_000068: ncbigene

HGNC:17239
type: HGNC
SIO_000068: hgnc

position:20966021:1
position: 20966021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20966585:1
position: 20966585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20966021-20966585:1:exon

NIPA2P3
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: NIPA2P3
note: non imprinted in Prader-Willi/Angelman syndrome 2 pseudogene 3; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 20993066..21004088
location: region:20993066-21004088:1
so has part: feature:20993066-21004088:1:exon

100128057
type: Gene
SIO_000068: ncbigene

HGNC:42043
type: HGNC
SIO_000068: hgnc

position:20993066:1
position: 20993066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21004088:1
position: 21004088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20993066-21004088:1:exon

LOC100288151
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC100288151
note: SREK1-interacting protein 1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 21112023..21112461
location: region:21112023-21112461:1
so has part: feature:21112023-21112461:1:exon

100288151
type: Gene
SIO_000068: ncbigene

position:21112023:1
position: 21112023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21112461:1
position: 21112461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21112023-21112461:1:exon

C1QBPP
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: C1QBPP
note: complement component 1, q subcomponent binding protein, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(21131434..21132441)
location: region:21131434-21132441:-1
so has part: feature:21131434-21132441:-1:exon

54098
type: Gene
SIO_000068: ncbigene

HGNC:1244
type: HGNC
SIO_000068: hgnc

position:21131434:-1
position: 21131434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21132441:-1
position: 21132441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21131434-21132441:-1:exon

C1QBPP
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: C1QBPP
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: C1QBPP
subclass of: SO_0000673
so part of: C1QBPP
location: complement(21131434..21132441)
location: region:21131434-21132441:-1
so has part: feature:21131434-21132441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21131434-21132441:-1:exon

FDPSP6
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: FDPSP
gene: FDPSP6
gene synonym: FDPSP
note: farnesyl diphosphate synthase pseudogene 6; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 21760493..21761253
location: region:21760493-21761253:1
so has part: feature:21760493-21761253:1:exon

54051
type: Gene
SIO_000068: ncbigene

HGNC:3637
type: HGNC
SIO_000068: hgnc

position:21760493:1
position: 21760493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21761253:1
position: 21761253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21760493-21761253:1:exon

KRT18P2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: KRT18P2
note: keratin 18 pseudogene 2; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(21797207..21798519)
location: region:21797207-21798519:-1
so has part: feature:21797207-21798519:-1:exon

54044
type: Gene
SIO_000068: ncbigene

HGNC:6435
type: HGNC
SIO_000068: hgnc

position:21797207:-1
position: 21797207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21798519:-1
position: 21798519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21797207-21798519:-1:exon

KRT18P2
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: KRT18P2
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: KRT18P2
subclass of: SO_0000673
so part of: KRT18P2
location: complement(21797207..21798519)
location: region:21797207-21798519:-1
so has part: feature:21797207-21798519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21797207-21798519:-1:exon

RPS3AP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: RPS3AP
gene: RPS3AP1
gene synonym: RPS3AP
note: ribosomal protein S3A pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(21802712..21803074)
location: region:21802712-21803074:-1
so has part: feature:21802712-21803074:-1:exon

101241875
type: Gene
SIO_000068: ncbigene

HGNC:10422
type: HGNC
SIO_000068: hgnc

position:21802712:-1
position: 21802712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21803074:-1
position: 21803074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21802712-21803074:-1:exon

LINC00320
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: C21orf131
alternative label: NCRNA00320
alternative label: PRED14
gene: LINC00320
gene synonym: C21orf131; NCRNA00320; PRED14
note: long intergenic non-protein coding RNA 320; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(22114863..22175569)
location: region:22114863-22175569:-1
so has part: feature:22114863-22175569:-1:exon

387486
type: Gene
SIO_000068: ncbigene

HGNC:19690
type: HGNC
SIO_000068: hgnc

position:22114863:-1
position: 22114863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22175569:-1
position: 22175569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22114863-22175569:-1:exon

LINC00320
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf131
alternative label: NCRNA00320
alternative label: PRED14
gene: LINC00320
gene synonym: C21orf131; NCRNA00320; PRED14
product: long intergenic non-protein coding RNA 320, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, and 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_244274.1
SIO_010081: LINC00320
so part of: LINC00320
location: complement(join(22114863..22116151,22150736..22150865,22153667..22153792,22153888..22153979,22154625..22154760,22158354..22158406,22175313..22175569))
location: region:22114863-22175569:-1
so has part: feature:22175313-22175569:-1:exon
so has part: feature:22158354-22158406:-1:exon
so has part: feature:22154625-22154760:-1:exon
so has part: feature:22153888-22153979:-1:exon
so has part: feature:22153667-22153792:-1:exon
so has part: feature:22150736-22150865:-1:exon
so has part: feature:22114863-22116151:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22175313-22175569:-1:exon

position:22175313:-1
position: 22175313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22158354-22158406:-1:exon

position:22158354:-1
position: 22158354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22158406:-1
position: 22158406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22154625-22154760:-1:exon

position:22154625:-1
position: 22154625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22154760:-1
position: 22154760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22153888-22153979:-1:exon

position:22153888:-1
position: 22153888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22153979:-1
position: 22153979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:22153667-22153792:-1:exon

position:22153667:-1
position: 22153667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22153792:-1
position: 22153792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:22150736-22150865:-1:exon

position:22150736:-1
position: 22150736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22150865:-1
position: 22150865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:22114863-22116151:-1:exon

position:22116151:-1
position: 22116151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LINC00320
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf131
alternative label: NCRNA00320
alternative label: PRED14
gene: LINC00320
gene synonym: C21orf131; NCRNA00320; PRED14
product: long intergenic non-protein coding RNA 320
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_024090.1
SIO_010081: LINC00320
so part of: LINC00320
location: complement(join(22114913..22116151,22150736..22150865,22150961..22151080,22153667..22153792,22153888..22153979,22154625..22154764,22158354..22158406,22175313..22175426))
location: region:22114913-22175426:-1
so has part: feature:22175313-22175426:-1:exon
so has part: feature:22158354-22158406:-1:exon
so has part: feature:22154625-22154764:-1:exon
so has part: feature:22153888-22153979:-1:exon
so has part: feature:22153667-22153792:-1:exon
so has part: feature:22150961-22151080:-1:exon
so has part: feature:22150736-22150865:-1:exon
so has part: feature:22114913-22116151:-1:exon

position:22114913:-1
position: 22114913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22175426:-1
position: 22175426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22175313-22175426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22158354-22158406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22154625-22154764:-1:exon

position:22154764:-1
position: 22154764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22153888-22153979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22153667-22153792:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22150961-22151080:-1:exon

position:22150961:-1
position: 22150961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22151080:-1
position: 22151080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:22150736-22150865:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22114913-22116151:-1:exon

LINC00320
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf131
alternative label: NCRNA00320
alternative label: PRED14
gene: LINC00320
gene synonym: C21orf131; NCRNA00320; PRED14
product: long intergenic non-protein coding RNA 320, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_244272.1
SIO_010081: LINC00320
so part of: LINC00320
location: complement(join(22115239..22116151,22129629..22129735,22150736..22150865,22150961..22151080,22153667..22153792,22153888..22153979,22154568..22154764,22175313..22175569))
location: region:22115239-22175569:-1
so has part: feature:22175313-22175569:-1:exon
so has part: feature:22154568-22154764:-1:exon
so has part: feature:22153888-22153979:-1:exon
so has part: feature:22153667-22153792:-1:exon
so has part: feature:22150961-22151080:-1:exon
so has part: feature:22150736-22150865:-1:exon
so has part: feature:22129629-22129735:-1:exon
so has part: feature:22115239-22116151:-1:exon

position:22115239:-1
position: 22115239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22175313-22175569:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22154568-22154764:-1:exon

position:22154568:-1
position: 22154568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22153888-22153979:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22153667-22153792:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22150961-22151080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22150736-22150865:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22129629-22129735:-1:exon

position:22129629:-1
position: 22129629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22129735:-1
position: 22129735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:22115239-22116151:-1:exon

LINC00320
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf131
alternative label: NCRNA00320
alternative label: PRED14
gene: LINC00320
gene synonym: C21orf131; NCRNA00320; PRED14
product: long intergenic non-protein coding RNA 320, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_244273.1
SIO_010081: LINC00320
so part of: LINC00320
location: complement(join(22115239..22116151,22150736..22150865,22153667..22153792,22153888..22153979,22154568..22154764,22158354..22158406,22175313..22175569))
location: region:22115239-22175569:-1
so has part: feature:22175313-22175569:-1:exon
so has part: feature:22158354-22158406:-1:exon
so has part: feature:22154568-22154764:-1:exon
so has part: feature:22153888-22153979:-1:exon
so has part: feature:22153667-22153792:-1:exon
so has part: feature:22150736-22150865:-1:exon
so has part: feature:22115239-22116151:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22175313-22175569:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22158354-22158406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22154568-22154764:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22153888-22153979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22153667-22153792:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22150736-22150865:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22115239-22116151:-1:exon

PPIAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: PPIAP
gene: PPIAP1
gene synonym: PPIAP
note: peptidylprolyl isomerase A (cyclophilin A), pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(22200236..22200982)
location: region:22200236-22200982:-1
so has part: feature:22200236-22200982:-1:exon

100288185
type: Gene
SIO_000068: ncbigene

HGNC:9254
type: HGNC
SIO_000068: hgnc

position:22200236:-1
position: 22200236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22200982:-1
position: 22200982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22200236-22200982:-1:exon

NCAM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: NCAM21
gene: NCAM2
gene synonym: NCAM21
note: neural cell adhesion molecule 2; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 22370633..22913892
location: region:22370633-22913892:1
so has part: feature:22370633-22913892:1:exon
subclass of: SO_0000010

4685
type: Gene
SIO_000068: ncbigene

HGNC:7657
type: HGNC
SIO_000068: hgnc

03619
type: HPRD
SIO_000068: hprd

602040
type: OMIM
SIO_000068: omim

position:22370633:1
position: 22370633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22913892:1
position: 22913892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22370633-22913892:1:exon

NCAM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: NCAM21
gene: NCAM2
gene synonym: NCAM21
product: neural cell adhesion molecule 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_004540.3
SIO_010081: NCAM2
subclass of: SO_0000673
so part of: NCAM2
location: join(22370633..22370936,22652898..22652972,22656514..22656720,22658589..22658732,22664424..22664561,22696703..22696820,22707825..22707985,22710709..22710854,22746183..22746333,22782594..22782781,22790793..22790889,22804428..22804601,22838927..22839046,22840983..22841104,22849612..22849792,22881172..22881376,22906858..22906977,22910167..22912517)
location: region:22370633-22912517:1
so has part: feature:22370633-22370936:1:exon
so has part: feature:22652898-22652972:1:exon
so has part: feature:22656514-22656720:1:exon
so has part: feature:22658589-22658732:1:exon
so has part: feature:22664424-22664561:1:exon
so has part: feature:22696703-22696820:1:exon
so has part: feature:22707825-22707985:1:exon
so has part: feature:22710709-22710854:1:exon
so has part: feature:22746183-22746333:1:exon
so has part: feature:22782594-22782781:1:exon
so has part: feature:22790793-22790889:1:exon
so has part: feature:22804428-22804601:1:exon
so has part: feature:22838927-22839046:1:exon
so has part: feature:22840983-22841104:1:exon
so has part: feature:22849612-22849792:1:exon
so has part: feature:22881172-22881376:1:exon
so has part: feature:22906858-22906977:1:exon
so has part: feature:22910167-22912517:1:exon

position:22912517:1
position: 22912517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22370633-22370936:1:exon

position:22370936:1
position: 22370936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22652898-22652972:1:exon

position:22652898:1
position: 22652898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22652972:1
position: 22652972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22656514-22656720:1:exon

position:22656514:1
position: 22656514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22656720:1
position: 22656720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22658589-22658732:1:exon

position:22658589:1
position: 22658589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22658732:1
position: 22658732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:22664424-22664561:1:exon

position:22664424:1
position: 22664424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22664561:1
position: 22664561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:22696703-22696820:1:exon

position:22696703:1
position: 22696703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22696820:1
position: 22696820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:22707825-22707985:1:exon

position:22707825:1
position: 22707825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22707985:1
position: 22707985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:22710709-22710854:1:exon

position:22710709:1
position: 22710709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22710854:1
position: 22710854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:22746183-22746333:1:exon

position:22746183:1
position: 22746183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22746333:1
position: 22746333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:22782594-22782781:1:exon

position:22782594:1
position: 22782594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22782781:1
position: 22782781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:22790793-22790889:1:exon

position:22790793:1
position: 22790793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22790889:1
position: 22790889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:22804428-22804601:1:exon

position:22804428:1
position: 22804428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22804601:1
position: 22804601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:22838927-22839046:1:exon

position:22838927:1
position: 22838927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22839046:1
position: 22839046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:22840983-22841104:1:exon

position:22840983:1
position: 22840983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22841104:1
position: 22841104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:22849612-22849792:1:exon

position:22849612:1
position: 22849612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22849792:1
position: 22849792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:22881172-22881376:1:exon

position:22881172:1
position: 22881172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22881376:1
position: 22881376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:22906858-22906977:1:exon

position:22906858:1
position: 22906858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22906977:1
position: 22906977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:22910167-22912517:1:exon

position:22910167:1
position: 22910167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NCAM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: NCAM21
gene: NCAM2
gene synonym: NCAM21
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: neural cell adhesion molecule 2 precursor
translation: MSLLLSFYLLGLLVSSGQALLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPNIIKDTLFNGLGLGAVIGLGVAALLLILVVTDVSCFFIRQCGLLMCITRRMCGKKSGSSGKSKELEEGKAAYLKDGSKEPIVEMRTEDERVTNHEDGSPVNEPNETTPLTEPEKLPLKEEDGKEALNPETIEIKVSNDIIQSKEDDSKA
SIO_010081: NCAM2
subclass of: SO_0000673
so part of: NCAM2
location: join(22370882..22370936,22652898..22652972,22656514..22656720,22658589..22658732,22664424..22664561,22696703..22696820,22707825..22707985,22710709..22710854,22746183..22746333,22782594..22782781,22790793..22790889,22804428..22804601,22838927..22839046,22840983..22841104,22849612..22849792,22881172..22881376,22906858..22906977,22910167..22910278)
location: region:22370882-22910278:1
so has part: feature:22370882-22370936:1:exon
so has part: feature:22652898-22652972:1:exon
so has part: feature:22656514-22656720:1:exon
so has part: feature:22658589-22658732:1:exon
so has part: feature:22664424-22664561:1:exon
so has part: feature:22696703-22696820:1:exon
so has part: feature:22707825-22707985:1:exon
so has part: feature:22710709-22710854:1:exon
so has part: feature:22746183-22746333:1:exon
so has part: feature:22782594-22782781:1:exon
so has part: feature:22790793-22790889:1:exon
so has part: feature:22804428-22804601:1:exon
so has part: feature:22838927-22839046:1:exon
so has part: feature:22840983-22841104:1:exon
so has part: feature:22849612-22849792:1:exon
so has part: feature:22881172-22881376:1:exon
so has part: feature:22906858-22906977:1:exon
so has part: feature:22910167-22910278:1:exon

NP_004531.2
type: Protein
SIO_000068: ncbiprotein

CCDS42910.1
type: CCDS
SIO_000068: ccds

position:22370882:1
position: 22370882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22910278:1
position: 22910278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22370882-22370936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22652898-22652972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22656514-22656720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22658589-22658732:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22664424-22664561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22696703-22696820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22707825-22707985:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22710709-22710854:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22746183-22746333:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22782594-22782781:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:22790793-22790889:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22804428-22804601:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22838927-22839046:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:22840983-22841104:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:22849612-22849792:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:22881172-22881376:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:22906858-22906977:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:22910167-22910278:1:exon

NCAM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: NCAM21
gene: NCAM2
gene synonym: NCAM21
product: neural cell adhesion molecule 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 43 ESTs, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005260987.1
SIO_010081: NCAM2
subclass of: SO_0000673
so part of: NCAM2
location: join(22519438..22519569,22582860..22583010,22652898..22652972,22656514..22656720,22658589..22658732,22664424..22664561,22696703..22696820,22707825..22707985,22710709..22710854,22746183..22746333,22782594..22782781,22790793..22790889,22804428..22804601,22838927..22839046,22840983..22841104,22849612..22849792,22881172..22881376,22906858..22906977,22910167..22913892)
location: region:22519438-22913892:1
so has part: feature:22519438-22519569:1:exon
so has part: feature:22582860-22583010:1:exon
so has part: feature:22652898-22652972:1:exon
so has part: feature:22656514-22656720:1:exon
so has part: feature:22658589-22658732:1:exon
so has part: feature:22664424-22664561:1:exon
so has part: feature:22696703-22696820:1:exon
so has part: feature:22707825-22707985:1:exon
so has part: feature:22710709-22710854:1:exon
so has part: feature:22746183-22746333:1:exon
so has part: feature:22782594-22782781:1:exon
so has part: feature:22790793-22790889:1:exon
so has part: feature:22804428-22804601:1:exon
so has part: feature:22838927-22839046:1:exon
so has part: feature:22840983-22841104:1:exon
so has part: feature:22849612-22849792:1:exon
so has part: feature:22881172-22881376:1:exon
so has part: feature:22906858-22906977:1:exon
so has part: feature:22910167-22913892:1:exon

position:22519438:1
position: 22519438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22519438-22519569:1:exon

position:22519569:1
position: 22519569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22582860-22583010:1:exon

position:22582860:1
position: 22582860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22583010:1
position: 22583010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22652898-22652972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22656514-22656720:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22658589-22658732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22664424-22664561:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22696703-22696820:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22707825-22707985:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22710709-22710854:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22746183-22746333:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:22782594-22782781:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22790793-22790889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22804428-22804601:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:22838927-22839046:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:22840983-22841104:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:22849612-22849792:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:22881172-22881376:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:22906858-22906977:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:22910167-22913892:1:exon

NCAM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: NCAM21
gene: NCAM2
gene synonym: NCAM21
product: neural cell adhesion molecule 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005260989.1
SIO_010081: NCAM2
subclass of: SO_0000673
so part of: NCAM2
location: join(22519438..22519569,22582860..22583010,22652898..22652972,22656514..22656720,22658589..22658732,22664424..22664561,22696703..22696820,22707825..22707985,22710709..22710854,22746183..22746333,22757924..22758033)
location: region:22519438-22758033:1
so has part: feature:22519438-22519569:1:exon
so has part: feature:22582860-22583010:1:exon
so has part: feature:22652898-22652972:1:exon
so has part: feature:22656514-22656720:1:exon
so has part: feature:22658589-22658732:1:exon
so has part: feature:22664424-22664561:1:exon
so has part: feature:22696703-22696820:1:exon
so has part: feature:22707825-22707985:1:exon
so has part: feature:22710709-22710854:1:exon
so has part: feature:22746183-22746333:1:exon
so has part: feature:22757924-22758033:1:exon

position:22758033:1
position: 22758033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22519438-22519569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22582860-22583010:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22652898-22652972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22656514-22656720:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22658589-22658732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22664424-22664561:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22696703-22696820:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22707825-22707985:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22710709-22710854:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22746183-22746333:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:22757924-22758033:1:exon

position:22757924:1
position: 22757924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NCAM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: NCAM21
gene: NCAM2
gene synonym: NCAM21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neural cell adhesion molecule 2 isoform X1
translation: MVRSDSGGQVYLDYHNRQGLFVDWKYNEALYLEEGQPETYYRTALLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPNIIKDTLFNGLGLGAVIGLGVAALLLILVVTDVSCFFIRQCGLLMCITRRMCGKKSGSSGKSKELEEGKAAYLKDGSKEPIVEMRTEDERVTNHEDGSPVNEPNETTPLTEPEKLPLKEEDGKEALNPETIEIKVSNDIIQSKEDDSKA
SIO_010081: NCAM2
subclass of: SO_0000673
so part of: NCAM2
location: join(22582881..22583010,22652898..22652972,22656514..22656720,22658589..22658732,22664424..22664561,22696703..22696820,22707825..22707985,22710709..22710854,22746183..22746333,22782594..22782781,22790793..22790889,22804428..22804601,22838927..22839046,22840983..22841104,22849612..22849792,22881172..22881376,22906858..22906977,22910167..22910278)
location: region:22582881-22910278:1
so has part: feature:22582881-22583010:1:exon
so has part: feature:22652898-22652972:1:exon
so has part: feature:22656514-22656720:1:exon
so has part: feature:22658589-22658732:1:exon
so has part: feature:22664424-22664561:1:exon
so has part: feature:22696703-22696820:1:exon
so has part: feature:22707825-22707985:1:exon
so has part: feature:22710709-22710854:1:exon
so has part: feature:22746183-22746333:1:exon
so has part: feature:22782594-22782781:1:exon
so has part: feature:22790793-22790889:1:exon
so has part: feature:22804428-22804601:1:exon
so has part: feature:22838927-22839046:1:exon
so has part: feature:22840983-22841104:1:exon
so has part: feature:22849612-22849792:1:exon
so has part: feature:22881172-22881376:1:exon
so has part: feature:22906858-22906977:1:exon
so has part: feature:22910167-22910278:1:exon

XP_005261044.1
type: Protein
SIO_000068: ncbiprotein

position:22582881:1
position: 22582881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22582881-22583010:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22652898-22652972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22656514-22656720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22658589-22658732:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22664424-22664561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22696703-22696820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22707825-22707985:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22710709-22710854:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22746183-22746333:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22782594-22782781:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:22790793-22790889:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22804428-22804601:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22838927-22839046:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:22840983-22841104:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:22849612-22849792:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:22881172-22881376:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:22906858-22906977:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:22910167-22910278:1:exon

NCAM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: NCAM21
gene: NCAM2
gene synonym: NCAM21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neural cell adhesion molecule 2 isoform X3
translation: MVRSDSGGQVYLDYHNRQGLFVDWKYNEALYLEEGQPETYYRTALLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIES
SIO_010081: NCAM2
subclass of: SO_0000673
so part of: NCAM2
location: join(22582881..22583010,22652898..22652972,22656514..22656720,22658589..22658732,22664424..22664561,22696703..22696820,22707825..22707985,22710709..22710854,22746183..22746333,22757924..22757928)
location: region:22582881-22757928:1
so has part: feature:22582881-22583010:1:exon
so has part: feature:22652898-22652972:1:exon
so has part: feature:22656514-22656720:1:exon
so has part: feature:22658589-22658732:1:exon
so has part: feature:22664424-22664561:1:exon
so has part: feature:22696703-22696820:1:exon
so has part: feature:22707825-22707985:1:exon
so has part: feature:22710709-22710854:1:exon
so has part: feature:22746183-22746333:1:exon
so has part: feature:22757924-22757928:1:exon

XP_005261046.1
type: Protein
SIO_000068: ncbiprotein

position:22757928:1
position: 22757928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22582881-22583010:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22652898-22652972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22656514-22656720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22658589-22658732:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22664424-22664561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22696703-22696820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22707825-22707985:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22710709-22710854:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22746183-22746333:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22757924-22757928:1:exon

NCAM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: NCAM21
gene: NCAM2
gene synonym: NCAM21
product: neural cell adhesion molecule 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 37 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005260988.1
SIO_010081: NCAM2
subclass of: SO_0000673
so part of: NCAM2
location: join(22658669..22658744,22664424..22664561,22696703..22696820,22707825..22707985,22710709..22710854,22746183..22746333,22782594..22782781,22790793..22790889,22804428..22804601,22838927..22839046,22840983..22841104,22849612..22849792,22881172..22881376,22906858..22906977,22910167..22913892)
location: region:22658669-22913892:1
so has part: feature:22658669-22658744:1:exon
so has part: feature:22664424-22664561:1:exon
so has part: feature:22696703-22696820:1:exon
so has part: feature:22707825-22707985:1:exon
so has part: feature:22710709-22710854:1:exon
so has part: feature:22746183-22746333:1:exon
so has part: feature:22782594-22782781:1:exon
so has part: feature:22790793-22790889:1:exon
so has part: feature:22804428-22804601:1:exon
so has part: feature:22838927-22839046:1:exon
so has part: feature:22840983-22841104:1:exon
so has part: feature:22849612-22849792:1:exon
so has part: feature:22881172-22881376:1:exon
so has part: feature:22906858-22906977:1:exon
so has part: feature:22910167-22913892:1:exon

position:22658669:1
position: 22658669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22658669-22658744:1:exon

position:22658744:1
position: 22658744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22664424-22664561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22696703-22696820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22707825-22707985:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22710709-22710854:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22746183-22746333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22782594-22782781:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22790793-22790889:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22804428-22804601:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22838927-22839046:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:22840983-22841104:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22849612-22849792:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22881172-22881376:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:22906858-22906977:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:22910167-22913892:1:exon

NCAM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: NCAM21
gene: NCAM2
gene synonym: NCAM21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neural cell adhesion molecule 2 isoform X2
translation: MLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPNIIKDTLFNGLGLGAVIGLGVAALLLILVVTDVSCFFIRQCGLLMCITRRMCGKKSGSSGKSKELEEGKAAYLKDGSKEPIVEMRTEDERVTNHEDGSPVNEPNETTPLTEPEKLPLKEEDGKEALNPETIEIKVSNDIIQSKEDDSKA
SIO_010081: NCAM2
subclass of: SO_0000673
so part of: NCAM2
location: join(22664435..22664561,22696703..22696820,22707825..22707985,22710709..22710854,22746183..22746333,22782594..22782781,22790793..22790889,22804428..22804601,22838927..22839046,22840983..22841104,22849612..22849792,22881172..22881376,22906858..22906977,22910167..22910278)
location: region:22664435-22910278:1
so has part: feature:22664435-22664561:1:exon
so has part: feature:22696703-22696820:1:exon
so has part: feature:22707825-22707985:1:exon
so has part: feature:22710709-22710854:1:exon
so has part: feature:22746183-22746333:1:exon
so has part: feature:22782594-22782781:1:exon
so has part: feature:22790793-22790889:1:exon
so has part: feature:22804428-22804601:1:exon
so has part: feature:22838927-22839046:1:exon
so has part: feature:22840983-22841104:1:exon
so has part: feature:22849612-22849792:1:exon
so has part: feature:22881172-22881376:1:exon
so has part: feature:22906858-22906977:1:exon
so has part: feature:22910167-22910278:1:exon

XP_005261045.1
type: Protein
SIO_000068: ncbiprotein

position:22664435:1
position: 22664435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22664435-22664561:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22696703-22696820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22707825-22707985:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22710709-22710854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22746183-22746333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22782594-22782781:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22790793-22790889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22804428-22804601:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22838927-22839046:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22840983-22841104:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:22849612-22849792:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22881172-22881376:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22906858-22906977:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:22910167-22910278:1:exon

LINC00317
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: C21orf117
alternative label: NCRNA00317
alternative label: PRED89
gene: LINC00317
gene synonym: C21orf117; NCRNA00317; PRED89
note: long intergenic non-protein coding RNA 317; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(<23095613..23109639)
location: region:23095613-23109639:-1
so has part: feature:23095613-23109639:-1:exon

378828
type: Gene
SIO_000068: ncbigene

HGNC:23126
type: HGNC
SIO_000068: hgnc

position:23095613:-1
position: 23095613
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:23109639:-1
position: 23109639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23095613-23109639:-1:exon

LINC00317
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf117
alternative label: NCRNA00317
alternative label: PRED89
gene: LINC00317
gene synonym: C21orf117; NCRNA00317; PRED89
product: long intergenic non-protein coding RNA 317
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_038872.1
SIO_010081: LINC00317
so part of: LINC00317
location: complement(join(<23095613..23096094,23099352..23099413,23109572..23109639))
location: region:23095613-23109639:-1
so has part: feature:23109572-23109639:-1:exon
so has part: feature:23099352-23099413:-1:exon
so has part: feature:23095613-23096094:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23109572-23109639:-1:exon

position:23109572:-1
position: 23109572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23099352-23099413:-1:exon

position:23099352:-1
position: 23099352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23099413:-1
position: 23099413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:23095613-23096094:-1:exon

position:23096094:-1
position: 23096094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101927821
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC101927821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 23119305..23169735
location: region:23119305-23169735:1
so has part: feature:23119305-23169735:1:exon

101927821
type: Gene
SIO_000068: ncbigene

position:23119305:1
position: 23119305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23169735:1
position: 23169735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23119305-23169735:1:exon

LOC101927821
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC101927821
product: uncharacterized LOC101927821
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 19% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_244296.1
SIO_010081: LOC101927821
so part of: LOC101927821
location: join(23119305..23119363,23120715..23121004,23157293..23157373,23158619..23158711,23169499..23169735)
location: region:23119305-23169735:1
so has part: feature:23119305-23119363:1:exon
so has part: feature:23120715-23121004:1:exon
so has part: feature:23157293-23157373:1:exon
so has part: feature:23158619-23158711:1:exon
so has part: feature:23169499-23169735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23119305-23119363:1:exon

position:23119363:1
position: 23119363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23120715-23121004:1:exon

position:23120715:1
position: 23120715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23121004:1
position: 23121004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:23157293-23157373:1:exon

position:23157293:1
position: 23157293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23157373:1
position: 23157373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:23158619-23158711:1:exon

position:23158619:1
position: 23158619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23158711:1
position: 23158711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:23169499-23169735:1:exon

position:23169499:1
position: 23169499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101927843
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC101927843
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(23381477..23470778)
location: region:23381477-23470778:-1
so has part: feature:23381477-23470778:-1:exon

101927843
type: Gene
SIO_000068: ncbigene

position:23381477:-1
position: 23381477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23470778:-1
position: 23470778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23381477-23470778:-1:exon

LOC101927843
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC101927843
product: uncharacterized LOC101927843
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_244297.1
SIO_010081: LOC101927843
so part of: LOC101927843
location: complement(join(23381477..23381677,23388619..23388729,23413539..23413754,23415264..23415427,23468848..23468905,23470632..23470778))
location: region:23381477-23470778:-1
so has part: feature:23470632-23470778:-1:exon
so has part: feature:23468848-23468905:-1:exon
so has part: feature:23415264-23415427:-1:exon
so has part: feature:23413539-23413754:-1:exon
so has part: feature:23388619-23388729:-1:exon
so has part: feature:23381477-23381677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23470632-23470778:-1:exon

position:23470632:-1
position: 23470632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23468848-23468905:-1:exon

position:23468848:-1
position: 23468848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23468905:-1
position: 23468905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:23415264-23415427:-1:exon

position:23415264:-1
position: 23415264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23415427:-1
position: 23415427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:23413539-23413754:-1:exon

position:23413539:-1
position: 23413539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23413754:-1
position: 23413754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:23388619-23388729:-1:exon

position:23388619:-1
position: 23388619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23388729:-1
position: 23388729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:23381477-23381677:-1:exon

position:23381677:-1
position: 23381677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LINC00308
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: C21orf74
alternative label: NCRNA00308
alternative label: PRED16
gene: LINC00308
gene synonym: C21orf74; NCRNA00308; PRED16
note: long intergenic non-protein coding RNA 308; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 23470936..23488847
location: region:23470936-23488847:1
so has part: feature:23470936-23488847:1:exon

54143
type: Gene
SIO_000068: ncbigene

HGNC:16023
type: HGNC
SIO_000068: hgnc

position:23470936:1
position: 23470936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23488847:1
position: 23488847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23470936-23488847:1:exon

LINC00308
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf74
alternative label: NCRNA00308
alternative label: PRED16
gene: LINC00308
gene synonym: C21orf74; NCRNA00308; PRED16
product: long intergenic non-protein coding RNA 308
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_038400.1
SIO_010081: LINC00308
so part of: LINC00308
location: join(23470936..23471031,23481765..23481872,23484090..23484145,23487079..23487217,23487297..23487431,23488655..23488847)
location: region:23470936-23488847:1
so has part: feature:23470936-23471031:1:exon
so has part: feature:23481765-23481872:1:exon
so has part: feature:23484090-23484145:1:exon
so has part: feature:23487079-23487217:1:exon
so has part: feature:23487297-23487431:1:exon
so has part: feature:23488655-23488847:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23470936-23471031:1:exon

position:23471031:1
position: 23471031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23481765-23481872:1:exon

position:23481765:1
position: 23481765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23481872:1
position: 23481872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:23484090-23484145:1:exon

position:23484090:1
position: 23484090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23484145:1
position: 23484145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:23487079-23487217:1:exon

position:23487079:1
position: 23487079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23487217:1
position: 23487217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:23487297-23487431:1:exon

position:23487297:1
position: 23487297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23487431:1
position: 23487431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:23488655-23488847:1:exon

position:23488655:1
position: 23488655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100420035
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC100420035
note: phosphoglycerate kinase 1 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(23507895..23508455)
location: region:23507895-23508455:-1
so has part: feature:23507895-23508455:-1:exon

100420035
type: Gene
SIO_000068: ncbigene

position:23507895:-1
position: 23507895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23508455:-1
position: 23508455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23507895-23508455:-1:exon

MAPK6PS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: MAPK6PS2
note: mitogen-activated protein kinase 6 pseudogene 2; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(23807356..23811387)
location: region:23807356-23811387:-1
so has part: feature:23807356-23811387:-1:exon

254664
type: Gene
SIO_000068: ncbigene

HGNC:16756
type: HGNC
SIO_000068: hgnc

position:23807356:-1
position: 23807356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23811387:-1
position: 23811387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23807356-23811387:-1:exon

MAPK6PS2
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: MAPK6PS2
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: MAPK6PS2
subclass of: SO_0000673
so part of: MAPK6PS2
location: complement(23807356..23811387)
location: region:23807356-23811387:-1
so has part: feature:23807356-23811387:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23807356-23811387:-1:exon

ZNF299P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: ZNF299
alternative label: ZNF299P1
gene: ZNF299P
gene synonym: ZNF299; ZNF299P1
note: zinc finger protein 299, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(24462793..24464066)
location: region:24462793-24464066:-1
so has part: feature:24462793-24464066:-1:exon

54012
type: Gene
SIO_000068: ncbigene

HGNC:13088
type: HGNC
SIO_000068: hgnc

position:24462793:-1
position: 24462793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24464066:-1
position: 24464066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24462793-24464066:-1:exon

MSANTD2P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: MSANTD2P1
note: Myb/SANT-like DNA-binding domain containing 2 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 24473509..24475393
location: region:24473509-24475393:1
so has part: feature:24473509-24475393:1:exon

100130310
type: Gene
SIO_000068: ncbigene

HGNC:39637
type: HGNC
SIO_000068: hgnc

position:24473509:1
position: 24473509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24475393:1
position: 24475393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24473509-24475393:1:exon

D21S2088E
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: D21S2088E
note: D21S2088E; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(<24733426..24757156)
location: region:24733426-24757156:-1
so has part: feature:24733426-24757156:-1:exon

266917
type: Gene
SIO_000068: ncbigene

position:24733426:-1
position: 24733426
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:24757156:-1
position: 24757156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24733426-24757156:-1:exon

D21S2088E
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: D21S2088E
product: D21S2088E
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_040254.1
SIO_010081: D21S2088E
so part of: D21S2088E
location: complement(join(<24733426..24734561,24736360..24736515,24744649..24744770,24745270..24745406,24757009..24757156))
location: region:24733426-24757156:-1
so has part: feature:24757009-24757156:-1:exon
so has part: feature:24745270-24745406:-1:exon
so has part: feature:24744649-24744770:-1:exon
so has part: feature:24736360-24736515:-1:exon
so has part: feature:24733426-24734561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24757009-24757156:-1:exon

position:24757009:-1
position: 24757009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24745270-24745406:-1:exon

position:24745270:-1
position: 24745270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24745406:-1
position: 24745406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24744649-24744770:-1:exon

position:24744649:-1
position: 24744649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24744770:-1
position: 24744770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24736360-24736515:-1:exon

position:24736360:-1
position: 24736360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24736515:-1
position: 24736515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:24733426-24734561:-1:exon

position:24734561:-1
position: 24734561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EEF1A1P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: EEF1A1P
gene: EEF1A1P1
gene synonym: EEF1A1P
note: eukaryotic translation elongation factor 1 alpha 1 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 24762580..24763614
location: region:24762580-24763614:1
so has part: feature:24762580-24763614:1:exon

54054
type: Gene
SIO_000068: ncbigene

HGNC:3191
type: HGNC
SIO_000068: hgnc

position:24762580:1
position: 24762580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24763614:1
position: 24763614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24762580-24763614:1:exon

TUBAP
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: TUBAP
note: tubulin, alpha pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(24779812..24781542)
location: region:24779812-24781542:-1
so has part: feature:24779812-24781542:-1:exon

54016
type: Gene
SIO_000068: ncbigene

HGNC:12411
type: HGNC
SIO_000068: hgnc

position:24779812:-1
position: 24779812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24781542:-1
position: 24781542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24779812-24781542:-1:exon

VN2R20P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: VN2R20P
note: vomeronasal 2 receptor 20 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 25282442..25282672
location: region:25282442-25282672:1
so has part: feature:25282442-25282672:1:exon

100033408
type: Gene
SIO_000068: ncbigene

HGNC:33226
type: HGNC
SIO_000068: hgnc

position:25282442:1
position: 25282442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25282672:1
position: 25282672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25282442-25282672:1:exon

LOC101927869
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC101927869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(25676863..25693690)
location: region:25676863-25693690:-1
so has part: feature:25676863-25693690:-1:exon

101927869
type: Gene
SIO_000068: ncbigene

position:25676863:-1
position: 25676863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25693690:-1
position: 25693690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25676863-25693690:-1:exon

LOC101927869
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC101927869
product: uncharacterized LOC101927869
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST
transcript id: XR_244298.1
SIO_010081: LOC101927869
so part of: LOC101927869
location: complement(join(25676863..25678482,25679932..25680072,25680529..25680646,25693563..25693690))
location: region:25676863-25693690:-1
so has part: feature:25693563-25693690:-1:exon
so has part: feature:25680529-25680646:-1:exon
so has part: feature:25679932-25680072:-1:exon
so has part: feature:25676863-25678482:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25693563-25693690:-1:exon

position:25693563:-1
position: 25693563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25680529-25680646:-1:exon

position:25680529:-1
position: 25680529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25680646:-1
position: 25680646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:25679932-25680072:-1:exon

position:25679932:-1
position: 25679932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25680072:-1
position: 25680072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:25676863-25678482:-1:exon

position:25678482:-1
position: 25678482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC339622
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC339622
note: uncharacterized LOC339622; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 26212864..26430059
location: region:26212864-26430059:1
so has part: feature:26212864-26430059:1:exon

339622
type: Gene
SIO_000068: ncbigene

position:26212864:1
position: 26212864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26430059:1
position: 26430059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26212864-26430059:1:exon

LOC339622
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC339622
product: uncharacterized LOC339622
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_046198.3
SIO_010081: LOC339622
so part of: LOC339622
location: join(26212864..26213042,26217093..26217243,26402097..26402172,26427747..26430059)
location: region:26212864-26430059:1
so has part: feature:26212864-26213042:1:exon
so has part: feature:26217093-26217243:1:exon
so has part: feature:26402097-26402172:1:exon
so has part: feature:26427747-26430059:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26212864-26213042:1:exon

position:26213042:1
position: 26213042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26217093-26217243:1:exon

position:26217093:1
position: 26217093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26217243:1
position: 26217243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:26402097-26402172:1:exon

position:26402097:1
position: 26402097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26402172:1
position: 26402172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:26427747-26430059:1:exon

position:26427747:1
position: 26427747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100419737
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC100419737
note: CTAGE family, member 5 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(26403331..26404233)
location: region:26403331-26404233:-1
so has part: feature:26403331-26404233:-1:exon

100419737
type: Gene
SIO_000068: ncbigene

position:26403331:-1
position: 26403331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26404233:-1
position: 26404233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26403331-26404233:-1:exon

RNA5SP489
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: RN5S489
gene: RNA5SP489
gene synonym: RN5S489
note: RNA, 5S ribosomal pseudogene 489; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 26574521..26574629
location: region:26574521-26574629:1
so has part: feature:26574521-26574629:1:exon

100873731
type: Gene
SIO_000068: ncbigene

HGNC:43389
type: HGNC
SIO_000068: hgnc

position:26574521:1
position: 26574521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26574629:1
position: 26574629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26574521-26574629:1:exon

RPL13AP7
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: RPL13A_12_1722
gene: RPL13AP7
gene synonym: RPL13A_12_1722
note: ribosomal protein L13a pseudogene 7; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 26734109..26735238
location: region:26734109-26735238:1
so has part: feature:26734109-26735238:1:exon

284821
type: Gene
SIO_000068: ncbigene

HGNC:23755
type: HGNC
SIO_000068: hgnc

position:26734109:1
position: 26734109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26735238:1
position: 26735238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26734109-26735238:1:exon

RPL13AP7
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
alternative label: RPL13A_12_1722
gene: RPL13AP7
gene synonym: RPL13A_12_1722
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: RPL13AP7
subclass of: SO_0000673
so part of: RPL13AP7
location: 26734109..26735238
location: region:26734109-26735238:1
so has part: feature:26734109-26735238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26734109-26735238:1:exon

LINC00158
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: C21orf42
alternative label: NCRNA00158
gene: LINC00158
gene synonym: C21orf42; NCRNA00158
note: long intergenic non-protein coding RNA 158; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(<26758133..26804013)
location: region:26758133-26804013:-1
so has part: feature:26758133-26804013:-1:exon

54072
type: Gene
SIO_000068: ncbigene

HGNC:1283
type: HGNC
SIO_000068: hgnc

position:26758133:-1
position: 26758133
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:26804013:-1
position: 26804013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26758133-26804013:-1:exon

LINC00158
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf42
alternative label: NCRNA00158
gene: LINC00158
gene synonym: C21orf42; NCRNA00158
product: long intergenic non-protein coding RNA 158
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_024027.2
SIO_010081: LINC00158
so part of: LINC00158
location: complement(join(<26758133..26758651,26793020..26793112,26796866..26796961,26802078..26802321,26803490..26804013))
location: region:26758133-26804013:-1
so has part: feature:26803490-26804013:-1:exon
so has part: feature:26802078-26802321:-1:exon
so has part: feature:26796866-26796961:-1:exon
so has part: feature:26793020-26793112:-1:exon
so has part: feature:26758133-26758651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26803490-26804013:-1:exon

position:26803490:-1
position: 26803490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26802078-26802321:-1:exon

position:26802078:-1
position: 26802078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26802321:-1
position: 26802321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:26796866-26796961:-1:exon

position:26796866:-1
position: 26796866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26796961:-1
position: 26796961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:26793020-26793112:-1:exon

position:26793020:-1
position: 26793020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26793112:-1
position: 26793112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:26758133-26758651:-1:exon

position:26758651:-1
position: 26758651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MIR155HG
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: BIC
alternative label: MIRHG2
alternative label: NCRNA00172
gene: MIR155HG
gene synonym: BIC; MIRHG2; NCRNA00172
note: MIR155 host gene (non-protein coding); Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 26934457..>26947480
location: region:26934457-26947480:1
so has part: feature:26934457-26947480:1:exon

114614
type: Gene
SIO_000068: ncbigene

HGNC:35460
type: HGNC
SIO_000068: hgnc

position:26934457:1
position: 26934457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26947480:1
position: 26947480
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26934457-26947480:1:exon

MIR155HG
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: BIC
alternative label: MIRHG2
alternative label: NCRNA00172
gene: MIR155HG
gene synonym: BIC; MIRHG2; NCRNA00172
product: MIR155 host gene (non-protein coding)
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_001458.3
SIO_010081: MIR155HG
so part of: MIR155HG
location: join(26934457..26934569,26942149..26942233,26946205..>26947480)
location: region:26934457-26947480:1
so has part: feature:26934457-26934569:1:exon
so has part: feature:26942149-26942233:1:exon
so has part: feature:26946205-26947480:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26934457-26934569:1:exon

position:26934569:1
position: 26934569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26942149-26942233:1:exon

position:26942149:1
position: 26942149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26942233:1
position: 26942233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:26946205-26947480:1:exon

position:26946205:1
position: 26946205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MIR155
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: MIRN155
alternative label: miRNA155
gene: MIR155
gene synonym: MIRN155; miRNA155
note: microRNA 155; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 26946292..26946356
location: region:26946292-26946356:1
so has part: feature:26946292-26946356:1:exon
subclass of: SO_0000571

406947
type: Gene
SIO_000068: ncbigene

HGNC:31542
type: HGNC
SIO_000068: hgnc

609337
type: OMIM
SIO_000068: omim

MI0000681
type: miRBase
SIO_000068: mirbase

position:26946292:1
position: 26946292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26946356:1
position: 26946356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26946292-26946356:1:exon

MIR155
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 9606
alternative label: MIRN155
alternative label: miRNA155
gene: MIR155
gene synonym: MIRN155; miRNA155
product: microRNA 155
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_030784.1
SIO_010081: MIR155
subclass of: SO_0000673
so part of: MIR155
location: 26946292..26946356
location: region:26946292-26946356:1
so has part: feature:26946292-26946356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26946292-26946356:1:exon

MIR155
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
alternative label: MIRN155
alternative label: miRNA155
nc RNA class: miRNA
gene: MIR155
gene synonym: MIRN155; miRNA155
product: hsa-miR-155-5p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR155
subclass of: SO_0000673
so part of: MIR155
location: 26946295..26946317
location: region:26946295-26946317:1
so has part: feature:26946295-26946317:1:exon

MIMAT0000646
type: miRBase
SIO_000068: mirbase

position:26946295:1
position: 26946295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26946317:1
position: 26946317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26946295-26946317:1:exon

MIR155
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
alternative label: MIRN155
alternative label: miRNA155
nc RNA class: miRNA
gene: MIR155
gene synonym: MIRN155; miRNA155
product: hsa-miR-155-3p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR155
subclass of: SO_0000673
so part of: MIR155
location: 26946334..26946355
location: region:26946334-26946355:1
so has part: feature:26946334-26946355:1:exon

MIMAT0004658
type: miRBase
SIO_000068: mirbase

position:26946334:1
position: 26946334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26946355:1
position: 26946355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26946334-26946355:1:exon

LINC00515
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: C21orf71
alternative label: PRED21
gene: LINC00515
gene synonym: C21orf71; PRED21
note: long intergenic non-protein coding RNA 515; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(<26955087..26955536)
location: region:26955087-26955536:-1
so has part: feature:26955087-26955536:-1:exon

282566
type: Gene
SIO_000068: ncbigene

HGNC:16019
type: HGNC
SIO_000068: hgnc

position:26955087:-1
position: 26955087
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:26955536:-1
position: 26955536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26955087-26955536:-1:exon

LINC00515
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf71
alternative label: PRED21
gene: LINC00515
gene synonym: C21orf71; PRED21
product: long intergenic non-protein coding RNA 515
inference: similar to RNA sequence (same species):RefSeq:NR_024092.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_024092.1
SIO_010081: LINC00515
so part of: LINC00515
location: complement(<26955087..26955536)
location: region:26955087-26955536:-1
so has part: feature:26955087-26955536:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26955087-26955536:-1:exon

MRPL39
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: C21orf92
alternative label: L39mt
alternative label: MRP-L5
alternative label: MRPL5
alternative label: MSTP003
alternative label: PRED22
alternative label: PRED66
alternative label: RPML5
gene: MRPL39
gene synonym: C21orf92; L39mt; MRP-L5; MRPL5; MSTP003; PRED22; PRED66; RPML5
note: mitochondrial ribosomal protein L39; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(26957968..26979801)
location: region:26957968-26979801:-1
so has part: feature:26957968-26979801:-1:exon
subclass of: SO_0000010

54148
type: Gene
SIO_000068: ncbigene

HGNC:14027
type: HGNC
SIO_000068: hgnc

11371
type: HPRD
SIO_000068: hprd

611845
type: OMIM
SIO_000068: omim

position:26957968:-1
position: 26957968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26979801:-1
position: 26979801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26957968-26979801:-1:exon

MRPL39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: C21orf92
alternative label: L39mt
alternative label: MRP-L5
alternative label: MRPL5
alternative label: MSTP003
alternative label: PRED22
alternative label: PRED66
alternative label: RPML5
gene: MRPL39
gene synonym: C21orf92; L39mt; MRP-L5; MRPL5; MSTP003; PRED22; PRED66; RPML5
product: mitochondrial ribosomal protein L39, transcript variant 1
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_017446.3
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_017446.3
SIO_010081: MRPL39
subclass of: SO_0000673
so part of: MRPL39
location: complement(join(26957968..26958066,26961147..26961194,26965124..26965277,26966205..26966270,26969614..26969726,26972111..26972178,26973680..26973779,26976108..26976247,26978761..26978967,26979715..26979801))
location: region:26957968-26979801:-1
so has part: feature:26979715-26979801:-1:exon
so has part: feature:26978761-26978967:-1:exon
so has part: feature:26976108-26976247:-1:exon
so has part: feature:26973680-26973779:-1:exon
so has part: feature:26972111-26972178:-1:exon
so has part: feature:26969614-26969726:-1:exon
so has part: feature:26966205-26966270:-1:exon
so has part: feature:26965124-26965277:-1:exon
so has part: feature:26961147-26961194:-1:exon
so has part: feature:26957968-26958066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26979715-26979801:-1:exon

position:26979715:-1
position: 26979715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26978761-26978967:-1:exon

position:26978761:-1
position: 26978761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26978967:-1
position: 26978967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:26976108-26976247:-1:exon

position:26976108:-1
position: 26976108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26976247:-1
position: 26976247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:26973680-26973779:-1:exon

position:26973680:-1
position: 26973680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26973779:-1
position: 26973779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:26972111-26972178:-1:exon

position:26972111:-1
position: 26972111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26972178:-1
position: 26972178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:26969614-26969726:-1:exon

position:26969614:-1
position: 26969614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26969726:-1
position: 26969726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:26966205-26966270:-1:exon

position:26966205:-1
position: 26966205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26966270:-1
position: 26966270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:26965124-26965277:-1:exon

position:26965124:-1
position: 26965124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26965277:-1
position: 26965277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:26961147-26961194:-1:exon

position:26961147:-1
position: 26961147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26961194:-1
position: 26961194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:26957968-26958066:-1:exon

position:26958066:-1
position: 26958066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPL39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: C21orf92
alternative label: L39mt
alternative label: MRP-L5
alternative label: MRPL5
alternative label: MSTP003
alternative label: PRED22
alternative label: PRED66
alternative label: RPML5
gene: MRPL39
gene synonym: C21orf92; L39mt; MRP-L5; MRPL5; MSTP003; PRED22; PRED66; RPML5
product: mitochondrial ribosomal protein L39, transcript variant 2
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_080794.3
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_080794.3
SIO_010081: MRPL39
subclass of: SO_0000673
so part of: MRPL39
location: complement(join(26957968..26958066,26960013..26960101,26961147..26961194,26965124..26965277,26966205..26966270,26969614..26969726,26972111..26972178,26973680..26973779,26976108..26976247,26978761..26978967,26979715..26979801))
location: region:26957968-26979801:-1
so has part: feature:26979715-26979801:-1:exon
so has part: feature:26978761-26978967:-1:exon
so has part: feature:26976108-26976247:-1:exon
so has part: feature:26973680-26973779:-1:exon
so has part: feature:26972111-26972178:-1:exon
so has part: feature:26969614-26969726:-1:exon
so has part: feature:26966205-26966270:-1:exon
so has part: feature:26965124-26965277:-1:exon
so has part: feature:26961147-26961194:-1:exon
so has part: feature:26960013-26960101:-1:exon
so has part: feature:26957968-26958066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26979715-26979801:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26978761-26978967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26976108-26976247:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26973680-26973779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26972111-26972178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26969614-26969726:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26966205-26966270:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:26965124-26965277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:26961147-26961194:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:26960013-26960101:-1:exon

position:26960013:-1
position: 26960013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26960101:-1
position: 26960101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:26957968-26958066:-1:exon

MRPL39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: C21orf92
alternative label: L39mt
alternative label: MRP-L5
alternative label: MRPL5
alternative label: MSTP003
alternative label: PRED22
alternative label: PRED66
alternative label: RPML5
gene: MRPL39
gene synonym: C21orf92; L39mt; MRP-L5; MRPL5; MSTP003; PRED22; PRED66; RPML5
inference: similar to AA sequence (same species):RefSeq:NP_059142.2
exception: annotated by transcript or proteomic data
note: isoform a is encoded by transcript variant 1; The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: 39S ribosomal protein L39, mitochondrial isoform a
translation: MEALAMGSRALRLWLVAPGGGIKWRFIATSPASQLSPTELTEMRNDLFNKEKARQLSLTPRTEKIEVKHVGKTDPGTVFVMNKNISTPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRSCAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKDAHALIYKDLPFETLEVEAKVALEIFQHSKYKVDFIEEKASQNPERIVKLHRIGDFIDVSEGPLIPRTSICFQYEVSAVHNLQPTQPSLIRRFQGVSLPVHLRAHFTIWDKLLERSRKMVTEDQSKATEECTST
SIO_010081: MRPL39
subclass of: SO_0000673
so part of: MRPL39
location: complement(join(26958019..26958066,26961147..26961194,26965124..26965277,26966205..26966270,26969614..26969726,26972111..26972178,26973680..26973779,26976108..26976247,26978761..26978967,26979715..26979787))
location: region:26958019-26979787:-1
so has part: feature:26979715-26979787:-1:exon
so has part: feature:26978761-26978967:-1:exon
so has part: feature:26976108-26976247:-1:exon
so has part: feature:26973680-26973779:-1:exon
so has part: feature:26972111-26972178:-1:exon
so has part: feature:26969614-26969726:-1:exon
so has part: feature:26966205-26966270:-1:exon
so has part: feature:26965124-26965277:-1:exon
so has part: feature:26961147-26961194:-1:exon
so has part: feature:26958019-26958066:-1:exon

NP_059142.2
type: Protein
SIO_000068: ncbiprotein

CCDS13573.1
type: CCDS
SIO_000068: ccds

position:26958019:-1
position: 26958019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26979787:-1
position: 26979787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26979715-26979787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26978761-26978967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26976108-26976247:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26973680-26973779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26972111-26972178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26969614-26969726:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26966205-26966270:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:26965124-26965277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:26961147-26961194:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:26958019-26958066:-1:exon

MRPL39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: C21orf92
alternative label: L39mt
alternative label: MRP-L5
alternative label: MRPL5
alternative label: MSTP003
alternative label: PRED22
alternative label: PRED66
alternative label: RPML5
gene: MRPL39
gene synonym: C21orf92; L39mt; MRP-L5; MRPL5; MSTP003; PRED22; PRED66; RPML5
inference: similar to AA sequence (same species):RefSeq:NP_542984.2
exception: annotated by transcript or proteomic data
note: isoform b is encoded by transcript variant 2; The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: 39S ribosomal protein L39, mitochondrial isoform b
translation: MEALAMGSRALRLWLVAPGGGIKWRFIATSPASQLSPTELTEMRNDLFNKEKARQLSLTPRTEKIEVKHVGKTDPGTVFVMNKNISTPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRSCAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKDAHALIYKDLPFETLEVEAKVALEIFQHSKYKVDFIEEKASQNPERIVKLHRIGDFIDVSEGPLIPRTSICFQYEVSAVHNLQPTQPSLIRRFQGVSLPVHLRAHFTIWDKLLERSRKMTPFPILLLFTTQSFFTTSPESYLLHGTVSE
SIO_010081: MRPL39
subclass of: SO_0000673
so part of: MRPL39
location: complement(join(26958063..26958066,26960013..26960101,26961147..26961194,26965124..26965277,26966205..26966270,26969614..26969726,26972111..26972178,26973680..26973779,26976108..26976247,26978761..26978967,26979715..26979787))
location: region:26958063-26979787:-1
so has part: feature:26979715-26979787:-1:exon
so has part: feature:26978761-26978967:-1:exon
so has part: feature:26976108-26976247:-1:exon
so has part: feature:26973680-26973779:-1:exon
so has part: feature:26972111-26972178:-1:exon
so has part: feature:26969614-26969726:-1:exon
so has part: feature:26966205-26966270:-1:exon
so has part: feature:26965124-26965277:-1:exon
so has part: feature:26961147-26961194:-1:exon
so has part: feature:26960013-26960101:-1:exon
so has part: feature:26958063-26958066:-1:exon

NP_542984.2
type: Protein
SIO_000068: ncbiprotein

CCDS33522.1
type: CCDS
SIO_000068: ccds

position:26958063:-1
position: 26958063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26979715-26979787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26978761-26978967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26976108-26976247:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26973680-26973779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26972111-26972178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26969614-26969726:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26966205-26966270:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:26965124-26965277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:26961147-26961194:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:26960013-26960101:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:26958063-26958066:-1:exon

JAM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: C21orf43
alternative label: CD322
alternative label: JAM-B
alternative label: JAMB
alternative label: PRO245
alternative label: VE-JAM
alternative label: VEJAM
gene: JAM2
gene synonym: C21orf43; CD322; JAM-B; JAMB; PRO245; VE-JAM; VEJAM
note: junctional adhesion molecule 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 27011594..>27089874
location: region:27011594-27089874:1
so has part: feature:27011594-27089874:1:exon
subclass of: SO_0000010

58494
type: Gene
SIO_000068: ncbigene

HGNC:14686
type: HGNC
SIO_000068: hgnc

06041
type: HPRD
SIO_000068: hprd

606870
type: OMIM
SIO_000068: omim

position:27011594:1
position: 27011594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27089874:1
position: 27089874
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27011594-27089874:1:exon

JAM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: C21orf43
alternative label: CD322
alternative label: JAM-B
alternative label: JAMB
alternative label: PRO245
alternative label: VE-JAM
alternative label: VEJAM
gene: JAM2
gene synonym: C21orf43; CD322; JAM-B; JAMB; PRO245; VE-JAM; VEJAM
product: junctional adhesion molecule 2, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_021219.3
SIO_010081: JAM2
subclass of: SO_0000673
so part of: JAM2
location: join(27011594..27012200,27056195..27056260,27062178..27062285,27066068..27066220,27070989..27071191,27074482..27074581,27078291..27078398,27081746..27081761,27084652..27084694,27086952..27089874)
location: region:27011594-27089874:1
so has part: feature:27011594-27012200:1:exon
so has part: feature:27056195-27056260:1:exon
so has part: feature:27062178-27062285:1:exon
so has part: feature:27066068-27066220:1:exon
so has part: feature:27070989-27071191:1:exon
so has part: feature:27074482-27074581:1:exon
so has part: feature:27078291-27078398:1:exon
so has part: feature:27081746-27081761:1:exon
so has part: feature:27084652-27084694:1:exon
so has part: feature:27086952-27089874:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27011594-27012200:1:exon

position:27012200:1
position: 27012200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27056195-27056260:1:exon

position:27056195:1
position: 27056195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27056260:1
position: 27056260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27062178-27062285:1:exon

position:27062178:1
position: 27062178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27062285:1
position: 27062285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:27066068-27066220:1:exon

position:27066068:1
position: 27066068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27066220:1
position: 27066220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:27070989-27071191:1:exon

position:27070989:1
position: 27070989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27071191:1
position: 27071191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:27074482-27074581:1:exon

position:27074482:1
position: 27074482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27074581:1
position: 27074581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:27078291-27078398:1:exon

position:27078291:1
position: 27078291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27078398:1
position: 27078398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:27081746-27081761:1:exon

position:27081746:1
position: 27081746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27081761:1
position: 27081761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:27084652-27084694:1:exon

position:27084652:1
position: 27084652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27084694:1
position: 27084694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:27086952-27089874:1:exon

position:27086952:1
position: 27086952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

JAM2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: C21orf43
alternative label: CD322
alternative label: JAM-B
alternative label: JAMB
alternative label: PRO245
alternative label: VE-JAM
alternative label: VEJAM
gene: JAM2
gene synonym: C21orf43; CD322; JAM-B; JAMB; PRO245; VE-JAM; VEJAM
product: junctional adhesion molecule 2, transcript variant 4
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_072999.1
SIO_010081: JAM2
so part of: JAM2
location: join(27011594..27012200,27056195..27056260,27062178..27062285,27066068..27066220,27070989..27071191,27074482..27074577,27078291..27078398,27081746..27081761,27084652..27084694,27086952..>27089874)
location: region:27011594-27089874:1
so has part: feature:27011594-27012200:1:exon
so has part: feature:27056195-27056260:1:exon
so has part: feature:27062178-27062285:1:exon
so has part: feature:27066068-27066220:1:exon
so has part: feature:27070989-27071191:1:exon
so has part: feature:27074482-27074577:1:exon
so has part: feature:27078291-27078398:1:exon
so has part: feature:27081746-27081761:1:exon
so has part: feature:27084652-27084694:1:exon
so has part: feature:27086952-27089874:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27011594-27012200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27056195-27056260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27062178-27062285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27066068-27066220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27070989-27071191:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27074482-27074577:1:exon

position:27074577:1
position: 27074577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:27078291-27078398:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27081746-27081761:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27084652-27084694:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27086952-27089874:1:exon

JAM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: C21orf43
alternative label: CD322
alternative label: JAM-B
alternative label: JAMB
alternative label: PRO245
alternative label: VE-JAM
alternative label: VEJAM
gene: JAM2
gene synonym: C21orf43; CD322; JAM-B; JAMB; PRO245; VE-JAM; VEJAM
product: junctional adhesion molecule 2, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001270407.1
SIO_010081: JAM2
subclass of: SO_0000673
so part of: JAM2
location: join(27011594..27012200,27056195..27056260,27066068..27066220,27070989..27071191,27074482..27074581,27078291..27078398,27081746..27081761,27084652..27084694,27086952..27089874)
location: region:27011594-27089874:1
so has part: feature:27011594-27012200:1:exon
so has part: feature:27056195-27056260:1:exon
so has part: feature:27066068-27066220:1:exon
so has part: feature:27070989-27071191:1:exon
so has part: feature:27074482-27074581:1:exon
so has part: feature:27078291-27078398:1:exon
so has part: feature:27081746-27081761:1:exon
so has part: feature:27084652-27084694:1:exon
so has part: feature:27086952-27089874:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27011594-27012200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27056195-27056260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27066068-27066220:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27070989-27071191:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27074482-27074581:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27078291-27078398:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27081746-27081761:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27084652-27084694:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27086952-27089874:1:exon

JAM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: C21orf43
alternative label: CD322
alternative label: JAM-B
alternative label: JAMB
alternative label: PRO245
alternative label: VE-JAM
alternative label: VEJAM
gene: JAM2
gene synonym: C21orf43; CD322; JAM-B; JAMB; PRO245; VE-JAM; VEJAM
product: junctional adhesion molecule 2, transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001270408.1
SIO_010081: JAM2
subclass of: SO_0000673
so part of: JAM2
location: join(27011594..27012200,27056195..27056260,27062178..27062285,27066068..27066220,27070989..27071191,27074482..27074581,27078291..27078398,27081746..27081761,27084652..27084694,27086543..27086885)
location: region:27011594-27086885:1
so has part: feature:27011594-27012200:1:exon
so has part: feature:27056195-27056260:1:exon
so has part: feature:27062178-27062285:1:exon
so has part: feature:27066068-27066220:1:exon
so has part: feature:27070989-27071191:1:exon
so has part: feature:27074482-27074581:1:exon
so has part: feature:27078291-27078398:1:exon
so has part: feature:27081746-27081761:1:exon
so has part: feature:27084652-27084694:1:exon
so has part: feature:27086543-27086885:1:exon

position:27086885:1
position: 27086885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27011594-27012200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27056195-27056260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27062178-27062285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27066068-27066220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27070989-27071191:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27074482-27074581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27078291-27078398:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27081746-27081761:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27084652-27084694:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27086543-27086885:1:exon

position:27086543:1
position: 27086543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

JAM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: C21orf43
alternative label: CD322
alternative label: JAM-B
alternative label: JAMB
alternative label: PRO245
alternative label: VE-JAM
alternative label: VEJAM
gene: JAM2
gene synonym: C21orf43; CD322; JAM-B; JAMB; PRO245; VE-JAM; VEJAM
note: isoform 1 precursor is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: junctional adhesion molecule B isoform 1 precursor
translation: MARRSRHRLLLLLLRYLVVALGYHKAYGFSAPKDQQVVTAVEYQEAILACKTPKKTVSSRLEWKKLGRSVSFVYYQQTLQGDFKNRAEMIDFNIRIKNVTRSDAGKYRCEVSAPSEQGQNLEEDTVTLEVLVAPAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLLENPRLGSQSTNSSYTMNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPGKRMQVDDLNISGIIAAVVVVALVISVCGLGVCYAQRKGYFSKETSFQKSNSSSKATTMSENDFKHTKSFII
SIO_010081: JAM2
subclass of: SO_0000673
so part of: JAM2
location: join(27012134..27012200,27056195..27056260,27062178..27062285,27066068..27066220,27070989..27071191,27074482..27074581,27078291..27078398,27081746..27081761,27084652..27084694,27086952..27086984)
location: region:27012134-27086984:1
so has part: feature:27012134-27012200:1:exon
so has part: feature:27056195-27056260:1:exon
so has part: feature:27062178-27062285:1:exon
so has part: feature:27066068-27066220:1:exon
so has part: feature:27070989-27071191:1:exon
so has part: feature:27074482-27074581:1:exon
so has part: feature:27078291-27078398:1:exon
so has part: feature:27081746-27081761:1:exon
so has part: feature:27084652-27084694:1:exon
so has part: feature:27086952-27086984:1:exon

NP_067042.1
type: Protein
SIO_000068: ncbiprotein

CCDS42911.1
type: CCDS
SIO_000068: ccds

position:27012134:1
position: 27012134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27086984:1
position: 27086984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27012134-27012200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27056195-27056260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27062178-27062285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27066068-27066220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27070989-27071191:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27074482-27074581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27078291-27078398:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27081746-27081761:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27084652-27084694:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27086952-27086984:1:exon

JAM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: C21orf43
alternative label: CD322
alternative label: JAM-B
alternative label: JAMB
alternative label: PRO245
alternative label: VE-JAM
alternative label: VEJAM
gene: JAM2
gene synonym: C21orf43; CD322; JAM-B; JAMB; PRO245; VE-JAM; VEJAM
note: isoform 2 precursor is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: junctional adhesion molecule B isoform 2 precursor
translation: MARRSRHRLLLLLLRYLVVALGYHKAYGFSAPKDQQVVTAVEYQGDFKNRAEMIDFNIRIKNVTRSDAGKYRCEVSAPSEQGQNLEEDTVTLEVLVAPAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLLENPRLGSQSTNSSYTMNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPGKRMQVDDLNISGIIAAVVVVALVISVCGLGVCYAQRKGYFSKETSFQKSNSSSKATTMSENDFKHTKSFII
SIO_010081: JAM2
subclass of: SO_0000673
so part of: JAM2
location: join(27012134..27012200,27056195..27056260,27066068..27066220,27070989..27071191,27074482..27074581,27078291..27078398,27081746..27081761,27084652..27084694,27086952..27086984)
location: region:27012134-27086984:1
so has part: feature:27012134-27012200:1:exon
so has part: feature:27056195-27056260:1:exon
so has part: feature:27066068-27066220:1:exon
so has part: feature:27070989-27071191:1:exon
so has part: feature:27074482-27074581:1:exon
so has part: feature:27078291-27078398:1:exon
so has part: feature:27081746-27081761:1:exon
so has part: feature:27084652-27084694:1:exon
so has part: feature:27086952-27086984:1:exon

NP_001257336.1
type: Protein
SIO_000068: ncbiprotein

CCDS58788.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:27012134-27012200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27056195-27056260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27066068-27066220:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27070989-27071191:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27074482-27074581:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27078291-27078398:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27081746-27081761:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27084652-27084694:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27086952-27086984:1:exon

JAM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: C21orf43
alternative label: CD322
alternative label: JAM-B
alternative label: JAMB
alternative label: PRO245
alternative label: VE-JAM
alternative label: VEJAM
gene: JAM2
gene synonym: C21orf43; CD322; JAM-B; JAMB; PRO245; VE-JAM; VEJAM
note: isoform 3 precursor is encoded by transcript variant 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: junctional adhesion molecule B isoform 3 precursor
translation: MARRSRHRLLLLLLRYLVVALGYHKAYGFSAPKDQQVVTAVEYQEAILACKTPKKTVSSRLEWKKLGRSVSFVYYQQTLQGDFKNRAEMIDFNIRIKNVTRSDAGKYRCEVSAPSEQGQNLEEDTVTLEVLVAPAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLLENPRLGSQSTNSSYTMNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPGKRMQVDDLNISGIIAAVVVVALVISVCGLGVCYAQRKGYFSKETSFQKSNSSSKATTMSENVQWLTPVIPALWKAAAGGSRGQEF
SIO_010081: JAM2
subclass of: SO_0000673
so part of: JAM2
location: join(27012134..27012200,27056195..27056260,27062178..27062285,27066068..27066220,27070989..27071191,27074482..27074581,27078291..27078398,27081746..27081761,27084652..27084694,27086543..27086617)
location: region:27012134-27086617:1
so has part: feature:27012134-27012200:1:exon
so has part: feature:27056195-27056260:1:exon
so has part: feature:27062178-27062285:1:exon
so has part: feature:27066068-27066220:1:exon
so has part: feature:27070989-27071191:1:exon
so has part: feature:27074482-27074581:1:exon
so has part: feature:27078291-27078398:1:exon
so has part: feature:27081746-27081761:1:exon
so has part: feature:27084652-27084694:1:exon
so has part: feature:27086543-27086617:1:exon

NP_001257337.1
type: Protein
SIO_000068: ncbiprotein

CCDS58787.1
type: CCDS
SIO_000068: ccds

position:27086617:1
position: 27086617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27012134-27012200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27056195-27056260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27062178-27062285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27066068-27066220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27070989-27071191:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27074482-27074581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27078291-27078398:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27081746-27081761:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27084652-27084694:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27086543-27086617:1:exon

RNGTTP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: RNGTTP1
note: RNA guanylyltransferase and 5'-phosphatase pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 27015857..27016531
location: region:27015857-27016531:1
so has part: feature:27015857-27016531:1:exon

100421428
type: Gene
SIO_000068: ncbigene

HGNC:39652
type: HGNC
SIO_000068: hgnc

position:27015857:1
position: 27015857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27016531:1
position: 27016531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27015857-27016531:1:exon

FDX1P2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: FDXP2
gene: FDX1P2
gene synonym: FDXP2
note: ferredoxin 1 pseudogene 2; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 27064483..27065457
location: region:27064483-27065457:1
so has part: feature:27064483-27065457:1:exon

2216
type: Gene
SIO_000068: ncbigene

HGNC:3641
type: HGNC
SIO_000068: hgnc

position:27064483:1
position: 27064483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27065457:1
position: 27065457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27064483-27065457:1:exon

ATP5J
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: ATP5
alternative label: ATP5A
alternative label: ATPM
alternative label: CF6
alternative label: F6
gene: ATP5J
gene synonym: ATP5; ATP5A; ATPM; CF6; F6
note: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(27096791..27107965)
location: region:27096791-27107965:-1
so has part: feature:27096791-27107965:-1:exon
subclass of: SO_0000010

522
type: Gene
SIO_000068: ncbigene

HGNC:847
type: HGNC
SIO_000068: hgnc

04399
type: HPRD
SIO_000068: hprd

603152
type: OMIM
SIO_000068: omim

position:27096791:-1
position: 27096791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27107965:-1
position: 27107965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27096791-27107965:-1:exon

ATP5J
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ATP5
alternative label: ATP5A
alternative label: ATPM
alternative label: CF6
alternative label: F6
gene: ATP5J
gene synonym: ATP5; ATP5A; ATPM; CF6; F6
product: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant 4
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001003697.1
SIO_010081: ATP5J
subclass of: SO_0000673
so part of: ATP5J
location: complement(join(27096791..27096988,27097537..27097661,27101942..27102112,27107798..27107965))
location: region:27096791-27107965:-1
so has part: feature:27107798-27107965:-1:exon
so has part: feature:27101942-27102112:-1:exon
so has part: feature:27097537-27097661:-1:exon
so has part: feature:27096791-27096988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27107798-27107965:-1:exon

position:27107798:-1
position: 27107798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27101942-27102112:-1:exon

position:27101942:-1
position: 27101942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27102112:-1
position: 27102112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27097537-27097661:-1:exon

position:27097537:-1
position: 27097537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27097661:-1
position: 27097661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:27096791-27096988:-1:exon

position:27096988:-1
position: 27096988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5J
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ATP5
alternative label: ATP5A
alternative label: ATPM
alternative label: CF6
alternative label: F6
gene: ATP5J
gene synonym: ATP5; ATP5A; ATPM; CF6; F6
product: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001003696.1
SIO_010081: ATP5J
subclass of: SO_0000673
so part of: ATP5J
location: complement(join(27096791..27096988,27097537..27097661,27101942..27102112,27107626..27107965))
location: region:27096791-27107965:-1
so has part: feature:27107626-27107965:-1:exon
so has part: feature:27101942-27102112:-1:exon
so has part: feature:27097537-27097661:-1:exon
so has part: feature:27096791-27096988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27107626-27107965:-1:exon

position:27107626:-1
position: 27107626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27101942-27102112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27097537-27097661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27096791-27096988:-1:exon

ATP5J
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ATP5
alternative label: ATP5A
alternative label: ATPM
alternative label: CF6
alternative label: F6
gene: ATP5J
gene synonym: ATP5; ATP5A; ATPM; CF6; F6
product: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001685.4
SIO_010081: ATP5J
subclass of: SO_0000673
so part of: ATP5J
location: complement(join(27096791..27096988,27097537..27097661,27101942..27102112,27107300..27107965))
location: region:27096791-27107965:-1
so has part: feature:27107300-27107965:-1:exon
so has part: feature:27101942-27102112:-1:exon
so has part: feature:27097537-27097661:-1:exon
so has part: feature:27096791-27096988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27107300-27107965:-1:exon

position:27107300:-1
position: 27107300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27101942-27102112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27097537-27097661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27096791-27096988:-1:exon

ATP5J
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ATP5
alternative label: ATP5A
alternative label: ATPM
alternative label: CF6
alternative label: F6
gene: ATP5J
gene synonym: ATP5; ATP5A; ATPM; CF6; F6
product: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant 5
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001003701.1
SIO_010081: ATP5J
subclass of: SO_0000673
so part of: ATP5J
location: complement(join(27096791..27096988,27097537..27097661,27101942..27102112,27107250..27107965))
location: region:27096791-27107965:-1
so has part: feature:27107250-27107965:-1:exon
so has part: feature:27101942-27102112:-1:exon
so has part: feature:27097537-27097661:-1:exon
so has part: feature:27096791-27096988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27107250-27107965:-1:exon

position:27107250:-1
position: 27107250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27101942-27102112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27097537-27097661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27096791-27096988:-1:exon

ATP5J
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ATP5
alternative label: ATP5A
alternative label: ATPM
alternative label: CF6
alternative label: F6
gene: ATP5J
gene synonym: ATP5; ATP5A; ATPM; CF6; F6
product: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001003703.1
SIO_010081: ATP5J
subclass of: SO_0000673
so part of: ATP5J
location: complement(join(27096791..27096988,27097537..27097661,27101942..27102112,27107164..27107965))
location: region:27096791-27107965:-1
so has part: feature:27107164-27107965:-1:exon
so has part: feature:27101942-27102112:-1:exon
so has part: feature:27097537-27097661:-1:exon
so has part: feature:27096791-27096988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27107164-27107965:-1:exon

position:27107164:-1
position: 27107164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27101942-27102112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27097537-27097661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27096791-27096988:-1:exon

ATP5J
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ATP5
alternative label: ATP5A
alternative label: ATPM
alternative label: CF6
alternative label: F6
gene: ATP5J
gene synonym: ATP5; ATP5A; ATPM; CF6; F6
product: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 24 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_005260992.1
SIO_010081: ATP5J
subclass of: SO_0000673
so part of: ATP5J
location: complement(join(27096811..27096988,27097537..27097661,27101942..27102112,27106644..27106686,27107164..27107216))
location: region:27096811-27107216:-1
so has part: feature:27107164-27107216:-1:exon
so has part: feature:27106644-27106686:-1:exon
so has part: feature:27101942-27102112:-1:exon
so has part: feature:27097537-27097661:-1:exon
so has part: feature:27096811-27096988:-1:exon

position:27096811:-1
position: 27096811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27107216:-1
position: 27107216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27107164-27107216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27106644-27106686:-1:exon

position:27106644:-1
position: 27106644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27106686:-1
position: 27106686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27101942-27102112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27097537-27097661:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27096811-27096988:-1:exon

ATP5J
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ATP5
alternative label: ATP5A
alternative label: ATPM
alternative label: CF6
alternative label: F6
gene: ATP5J
gene synonym: ATP5; ATP5A; ATPM; CF6; F6
note: isoform b precursor is encoded by transcript variant 5; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial isoform b precursor
translation: MHCDGGISMILQRLFRFSSVIRSAVSVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGPVDASSEYQQELERELFKLKQMFGNADMNTFPTFKFEDPKFEVIEKPQA
SIO_010081: ATP5J
subclass of: SO_0000673
so part of: ATP5J
location: complement(join(27096951..27096988,27097537..27097661,27101942..27102112,27107250..27107266))
location: region:27096951-27107266:-1
so has part: feature:27107250-27107266:-1:exon
so has part: feature:27101942-27102112:-1:exon
so has part: feature:27097537-27097661:-1:exon
so has part: feature:27096951-27096988:-1:exon

NP_001003701.1
type: Protein
SIO_000068: ncbiprotein

CCDS46637.1
type: CCDS
SIO_000068: ccds

position:27096951:-1
position: 27096951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27107266:-1
position: 27107266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27107250-27107266:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27101942-27102112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27097537-27097661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27096951-27096988:-1:exon

ATP5J
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ATP5
alternative label: ATP5A
alternative label: ATPM
alternative label: CF6
alternative label: F6
gene: ATP5J
gene synonym: ATP5; ATP5A; ATPM; CF6; F6
note: isoform a precursor is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial isoform a precursor
translation: MILQRLFRFSSVIRSAVSVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGPVDASSEYQQELERELFKLKQMFGNADMNTFPTFKFEDPKFEVIEKPQA
SIO_010081: ATP5J
subclass of: SO_0000673
so part of: ATP5J
location: complement(join(27096951..27096988,27097537..27097661,27101942..27102105))
location: region:27096951-27102105:-1
so has part: feature:27101942-27102105:-1:exon
so has part: feature:27097537-27097661:-1:exon
so has part: feature:27096951-27096988:-1:exon

NP_001676.2
type: Protein
SIO_000068: ncbiprotein

CCDS13574.1
type: CCDS
SIO_000068: ccds

position:27102105:-1
position: 27102105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27101942-27102105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27097537-27097661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27096951-27096988:-1:exon

ATP5J
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ATP5
alternative label: ATP5A
alternative label: ATPM
alternative label: CF6
alternative label: F6
gene: ATP5J
gene synonym: ATP5; ATP5A; ATPM; CF6; F6
note: isoform a precursor is encoded by transcript variant 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial isoform a precursor
translation: MILQRLFRFSSVIRSAVSVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGPVDASSEYQQELERELFKLKQMFGNADMNTFPTFKFEDPKFEVIEKPQA
SIO_010081: ATP5J
subclass of: SO_0000673
so part of: ATP5J
location: complement(join(27096951..27096988,27097537..27097661,27101942..27102105))
location: region:27096951-27102105:-1
so has part: feature:27101942-27102105:-1:exon
so has part: feature:27097537-27097661:-1:exon
so has part: feature:27096951-27096988:-1:exon

NP_001003696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27101942-27102105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27097537-27097661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27096951-27096988:-1:exon

ATP5J
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ATP5
alternative label: ATP5A
alternative label: ATPM
alternative label: CF6
alternative label: F6
gene: ATP5J
gene synonym: ATP5; ATP5A; ATPM; CF6; F6
note: isoform a precursor is encoded by transcript variant 4; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial isoform a precursor
translation: MILQRLFRFSSVIRSAVSVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGPVDASSEYQQELERELFKLKQMFGNADMNTFPTFKFEDPKFEVIEKPQA
SIO_010081: ATP5J
subclass of: SO_0000673
so part of: ATP5J
location: complement(join(27096951..27096988,27097537..27097661,27101942..27102105))
location: region:27096951-27102105:-1
so has part: feature:27101942-27102105:-1:exon
so has part: feature:27097537-27097661:-1:exon
so has part: feature:27096951-27096988:-1:exon

NP_001003697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27101942-27102105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27097537-27097661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27096951-27096988:-1:exon

ATP5J
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ATP5
alternative label: ATP5A
alternative label: ATPM
alternative label: CF6
alternative label: F6
gene: ATP5J
gene synonym: ATP5; ATP5A; ATPM; CF6; F6
note: isoform a precursor is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial isoform a precursor
translation: MILQRLFRFSSVIRSAVSVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGPVDASSEYQQELERELFKLKQMFGNADMNTFPTFKFEDPKFEVIEKPQA
SIO_010081: ATP5J
subclass of: SO_0000673
so part of: ATP5J
location: complement(join(27096951..27096988,27097537..27097661,27101942..27102105))
location: region:27096951-27102105:-1
so has part: feature:27101942-27102105:-1:exon
so has part: feature:27097537-27097661:-1:exon
so has part: feature:27096951-27096988:-1:exon

NP_001003703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27101942-27102105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27097537-27097661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27096951-27096988:-1:exon

ATP5J
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ATP5
alternative label: ATP5A
alternative label: ATPM
alternative label: CF6
alternative label: F6
gene: ATP5J
gene synonym: ATP5; ATP5A; ATPM; CF6; F6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial isoform X1
translation: MILQRLFRFSSVIRSAVSVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGPVDASSEYQQELERELFKLKQMFGNADMNTFPTFKFEDPKFEVIEKPQA
SIO_010081: ATP5J
subclass of: SO_0000673
so part of: ATP5J
location: complement(join(27096951..27096988,27097537..27097661,27101942..27102105))
location: region:27096951-27102105:-1
so has part: feature:27101942-27102105:-1:exon
so has part: feature:27097537-27097661:-1:exon
so has part: feature:27096951-27096988:-1:exon

XP_005261049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27101942-27102105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27097537-27097661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27096951-27096988:-1:exon

GABPA
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: E4TF1-60
alternative label: E4TF1A
alternative label: NFT2
alternative label: NRF2
alternative label: NRF2A
alternative label: RCH04A07
gene: GABPA
gene synonym: E4TF1-60; E4TF1A; NFT2; NRF2; NRF2A; RCH04A07
note: GA binding protein transcription factor, alpha subunit 60kDa; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 27107258..27144771
location: region:27107258-27144771:1
so has part: feature:27107258-27144771:1:exon
subclass of: SO_0000010

2551
type: Gene
SIO_000068: ncbigene

HGNC:4071
type: HGNC
SIO_000068: hgnc

11793
type: HPRD
SIO_000068: hprd

600609
type: OMIM
SIO_000068: omim

position:27107258:1
position: 27107258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27144771:1
position: 27144771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27107258-27144771:1:exon

GABPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: E4TF1-60
alternative label: E4TF1A
alternative label: NFT2
alternative label: NRF2
alternative label: NRF2A
alternative label: RCH04A07
gene: GABPA
gene synonym: E4TF1-60; E4TF1A; NFT2; NRF2; NRF2A; RCH04A07
product: GA binding protein transcription factor, alpha subunit 60kDa, transcript variant 2
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001197297.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001197297.1
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(27107258..27107381,27113884..27113986,27117521..27117665,27121347..27121431,27124300..27124545,27130321..27130515,27134623..27134676,27136521..27136661,27136906..27137098,27141315..27144771)
location: region:27107258-27144771:1
so has part: feature:27107258-27107381:1:exon
so has part: feature:27113884-27113986:1:exon
so has part: feature:27117521-27117665:1:exon
so has part: feature:27121347-27121431:1:exon
so has part: feature:27124300-27124545:1:exon
so has part: feature:27130321-27130515:1:exon
so has part: feature:27134623-27134676:1:exon
so has part: feature:27136521-27136661:1:exon
so has part: feature:27136906-27137098:1:exon
so has part: feature:27141315-27144771:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27107258-27107381:1:exon

position:27107381:1
position: 27107381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27113884-27113986:1:exon

position:27113884:1
position: 27113884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27113986:1
position: 27113986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27117521-27117665:1:exon

position:27117521:1
position: 27117521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27117665:1
position: 27117665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:27121347-27121431:1:exon

position:27121347:1
position: 27121347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27121431:1
position: 27121431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:27124300-27124545:1:exon

position:27124300:1
position: 27124300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27124545:1
position: 27124545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:27130321-27130515:1:exon

position:27130321:1
position: 27130321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27130515:1
position: 27130515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:27134623-27134676:1:exon

position:27134623:1
position: 27134623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27134676:1
position: 27134676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:27136521-27136661:1:exon

position:27136521:1
position: 27136521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27136661:1
position: 27136661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:27136906-27137098:1:exon

position:27136906:1
position: 27136906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27137098:1
position: 27137098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:27141315-27144771:1:exon

position:27141315:1
position: 27141315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GABPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: E4TF1-60
alternative label: E4TF1A
alternative label: NFT2
alternative label: NRF2
alternative label: NRF2A
alternative label: RCH04A07
gene: GABPA
gene synonym: E4TF1-60; E4TF1A; NFT2; NRF2; NRF2A; RCH04A07
product: GA binding protein transcription factor, alpha subunit 60kDa, transcript variant 1
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_002040.3
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_002040.3
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(27107329..27107889,27113884..27113986,27117521..27117665,27121347..27121431,27124300..27124545,27130321..27130515,27134623..27134676,27136521..27136661,27136906..27137098,27141315..27144771)
location: region:27107329-27144771:1
so has part: feature:27107329-27107889:1:exon
so has part: feature:27113884-27113986:1:exon
so has part: feature:27117521-27117665:1:exon
so has part: feature:27121347-27121431:1:exon
so has part: feature:27124300-27124545:1:exon
so has part: feature:27130321-27130515:1:exon
so has part: feature:27134623-27134676:1:exon
so has part: feature:27136521-27136661:1:exon
so has part: feature:27136906-27137098:1:exon
so has part: feature:27141315-27144771:1:exon

position:27107329:1
position: 27107329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27107329-27107889:1:exon

position:27107889:1
position: 27107889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27113884-27113986:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27117521-27117665:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27121347-27121431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27124300-27124545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27130321-27130515:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27134623-27134676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27136521-27136661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27136906-27137098:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27141315-27144771:1:exon

GABPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: E4TF1-60
alternative label: E4TF1A
alternative label: NFT2
alternative label: NRF2
alternative label: NRF2A
alternative label: RCH04A07
gene: GABPA
gene synonym: E4TF1-60; E4TF1A; NFT2; NRF2; NRF2A; RCH04A07
product: GA binding protein transcription factor, alpha subunit 60kDa, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 34 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005260938.1
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(27107501..27107696,27113884..27113986,27117521..27117665,27121347..27121431,27124300..27124545,27130321..27130515,27134623..27134676,27136521..27136661,27136906..27137098,27141315..27144771)
location: region:27107501-27144771:1
so has part: feature:27107501-27107696:1:exon
so has part: feature:27113884-27113986:1:exon
so has part: feature:27117521-27117665:1:exon
so has part: feature:27121347-27121431:1:exon
so has part: feature:27124300-27124545:1:exon
so has part: feature:27130321-27130515:1:exon
so has part: feature:27134623-27134676:1:exon
so has part: feature:27136521-27136661:1:exon
so has part: feature:27136906-27137098:1:exon
so has part: feature:27141315-27144771:1:exon

position:27107501:1
position: 27107501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27107501-27107696:1:exon

position:27107696:1
position: 27107696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27113884-27113986:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27117521-27117665:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27121347-27121431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27124300-27124545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27130321-27130515:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27134623-27134676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27136521-27136661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27136906-27137098:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27141315-27144771:1:exon

GABPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: E4TF1-60
alternative label: E4TF1A
alternative label: NFT2
alternative label: NRF2
alternative label: NRF2A
alternative label: RCH04A07
gene: GABPA
gene synonym: E4TF1-60; E4TF1A; NFT2; NRF2; NRF2A; RCH04A07
product: GA binding protein transcription factor, alpha subunit 60kDa, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 32 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005260939.1
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(27112318..27112343,27113884..27113986,27117521..27117665,27121347..27121431,27124300..27124545,27130321..27130515,27134623..27134676,27136521..27136661,27136906..27137098,27141315..27144771)
location: region:27112318-27144771:1
so has part: feature:27112318-27112343:1:exon
so has part: feature:27113884-27113986:1:exon
so has part: feature:27117521-27117665:1:exon
so has part: feature:27121347-27121431:1:exon
so has part: feature:27124300-27124545:1:exon
so has part: feature:27130321-27130515:1:exon
so has part: feature:27134623-27134676:1:exon
so has part: feature:27136521-27136661:1:exon
so has part: feature:27136906-27137098:1:exon
so has part: feature:27141315-27144771:1:exon

position:27112318:1
position: 27112318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27112318-27112343:1:exon

position:27112343:1
position: 27112343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27113884-27113986:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27117521-27117665:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27121347-27121431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27124300-27124545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27130321-27130515:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27134623-27134676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27136521-27136661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27136906-27137098:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27141315-27144771:1:exon

GABPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: E4TF1-60
alternative label: E4TF1A
alternative label: NFT2
alternative label: NRF2
alternative label: NRF2A
alternative label: RCH04A07
gene: GABPA
gene synonym: E4TF1-60; E4TF1A; NFT2; NRF2; NRF2A; RCH04A07
product: GA binding protein transcription factor, alpha subunit 60kDa, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 32 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005260940.1
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(27112732..27112798,27113884..27113986,27117521..27117665,27121347..27121431,27124300..27124545,27130321..27130515,27134623..27134676,27136521..27136661,27136906..27137098,27141315..27144771)
location: region:27112732-27144771:1
so has part: feature:27112732-27112798:1:exon
so has part: feature:27113884-27113986:1:exon
so has part: feature:27117521-27117665:1:exon
so has part: feature:27121347-27121431:1:exon
so has part: feature:27124300-27124545:1:exon
so has part: feature:27130321-27130515:1:exon
so has part: feature:27134623-27134676:1:exon
so has part: feature:27136521-27136661:1:exon
so has part: feature:27136906-27137098:1:exon
so has part: feature:27141315-27144771:1:exon

position:27112732:1
position: 27112732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27112732-27112798:1:exon

position:27112798:1
position: 27112798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27113884-27113986:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27117521-27117665:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27121347-27121431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27124300-27124545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27130321-27130515:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27134623-27134676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27136521-27136661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27136906-27137098:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27141315-27144771:1:exon

GABPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: E4TF1-60
alternative label: E4TF1A
alternative label: NFT2
alternative label: NRF2
alternative label: NRF2A
alternative label: RCH04A07
gene: GABPA
gene synonym: E4TF1-60; E4TF1A; NFT2; NRF2; NRF2A; RCH04A07
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: GA-binding protein alpha chain
translation: MTKREAEELIEIEIDGTEKAECTEESIVEQTYAPAECVSQAIDINEPIGNLKKLLEPRLQCSLDAHEICLQDIQLDPERSLFDQGVKTDGTVQLSVQVISYQGIEPKLNILEIVKPADTVEVVIDPDAHHAESEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERLGIPYDPIQWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPRGEILWSHLELLRKYVLASQEQQMNEIVTIDQPVQIIPASVQSATPTTIKVINSSAKAAKVQRAPRISGEDRSSPGNRTGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVTECEQKKLAKMQLHGIAQPVTAVALATASLQTEKDN
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(27113910..27113986,27117521..27117665,27121347..27121431,27124300..27124545,27130321..27130515,27134623..27134676,27136521..27136661,27136906..27137098,27141315..27141543)
location: region:27113910-27141543:1
so has part: feature:27113910-27113986:1:exon
so has part: feature:27117521-27117665:1:exon
so has part: feature:27121347-27121431:1:exon
so has part: feature:27124300-27124545:1:exon
so has part: feature:27130321-27130515:1:exon
so has part: feature:27134623-27134676:1:exon
so has part: feature:27136521-27136661:1:exon
so has part: feature:27136906-27137098:1:exon
so has part: feature:27141315-27141543:1:exon

NP_001184226.1
type: Protein
SIO_000068: ncbiprotein

CCDS13575.1
type: CCDS
SIO_000068: ccds

position:27113910:1
position: 27113910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27141543:1
position: 27141543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27113910-27113986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27117521-27117665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27121347-27121431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27124300-27124545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27130321-27130515:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27134623-27134676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27136521-27136661:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27136906-27137098:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27141315-27141543:1:exon

GABPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: E4TF1-60
alternative label: E4TF1A
alternative label: NFT2
alternative label: NRF2
alternative label: NRF2A
alternative label: RCH04A07
gene: GABPA
gene synonym: E4TF1-60; E4TF1A; NFT2; NRF2; NRF2A; RCH04A07
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: GA-binding protein alpha chain
translation: MTKREAEELIEIEIDGTEKAECTEESIVEQTYAPAECVSQAIDINEPIGNLKKLLEPRLQCSLDAHEICLQDIQLDPERSLFDQGVKTDGTVQLSVQVISYQGIEPKLNILEIVKPADTVEVVIDPDAHHAESEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERLGIPYDPIQWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPRGEILWSHLELLRKYVLASQEQQMNEIVTIDQPVQIIPASVQSATPTTIKVINSSAKAAKVQRAPRISGEDRSSPGNRTGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVTECEQKKLAKMQLHGIAQPVTAVALATASLQTEKDN
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(27113910..27113986,27117521..27117665,27121347..27121431,27124300..27124545,27130321..27130515,27134623..27134676,27136521..27136661,27136906..27137098,27141315..27141543)
location: region:27113910-27141543:1
so has part: feature:27113910-27113986:1:exon
so has part: feature:27117521-27117665:1:exon
so has part: feature:27121347-27121431:1:exon
so has part: feature:27124300-27124545:1:exon
so has part: feature:27130321-27130515:1:exon
so has part: feature:27134623-27134676:1:exon
so has part: feature:27136521-27136661:1:exon
so has part: feature:27136906-27137098:1:exon
so has part: feature:27141315-27141543:1:exon

NP_002031.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27113910-27113986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27117521-27117665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27121347-27121431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27124300-27124545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27130321-27130515:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27134623-27134676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27136521-27136661:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27136906-27137098:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27141315-27141543:1:exon

GABPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: E4TF1-60
alternative label: E4TF1A
alternative label: NFT2
alternative label: NRF2
alternative label: NRF2A
alternative label: RCH04A07
gene: GABPA
gene synonym: E4TF1-60; E4TF1A; NFT2; NRF2; NRF2A; RCH04A07
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein alpha chain isoform X1
translation: MTKREAEELIEIEIDGTEKAECTEESIVEQTYAPAECVSQAIDINEPIGNLKKLLEPRLQCSLDAHEICLQDIQLDPERSLFDQGVKTDGTVQLSVQVISYQGIEPKLNILEIVKPADTVEVVIDPDAHHAESEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERLGIPYDPIQWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPRGEILWSHLELLRKYVLASQEQQMNEIVTIDQPVQIIPASVQSATPTTIKVINSSAKAAKVQRAPRISGEDRSSPGNRTGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVTECEQKKLAKMQLHGIAQPVTAVALATASLQTEKDN
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(27113910..27113986,27117521..27117665,27121347..27121431,27124300..27124545,27130321..27130515,27134623..27134676,27136521..27136661,27136906..27137098,27141315..27141543)
location: region:27113910-27141543:1
so has part: feature:27113910-27113986:1:exon
so has part: feature:27117521-27117665:1:exon
so has part: feature:27121347-27121431:1:exon
so has part: feature:27124300-27124545:1:exon
so has part: feature:27130321-27130515:1:exon
so has part: feature:27134623-27134676:1:exon
so has part: feature:27136521-27136661:1:exon
so has part: feature:27136906-27137098:1:exon
so has part: feature:27141315-27141543:1:exon

XP_005260995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27113910-27113986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27117521-27117665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27121347-27121431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27124300-27124545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27130321-27130515:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27134623-27134676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27136521-27136661:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27136906-27137098:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27141315-27141543:1:exon

GABPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: E4TF1-60
alternative label: E4TF1A
alternative label: NFT2
alternative label: NRF2
alternative label: NRF2A
alternative label: RCH04A07
gene: GABPA
gene synonym: E4TF1-60; E4TF1A; NFT2; NRF2; NRF2A; RCH04A07
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein alpha chain isoform X2
translation: MTKREAEELIEIEIDGTEKAECTEESIVEQTYAPAECVSQAIDINEPIGNLKKLLEPRLQCSLDAHEICLQDIQLDPERSLFDQGVKTDGTVQLSVQVISYQGIEPKLNILEIVKPADTVEVVIDPDAHHAESEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERLGIPYDPIQWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPRGEILWSHLELLRKYVLASQEQQMNEIVTIDQPVQIIPASVQSATPTTIKVINSSAKAAKVQRAPRISGEDRSSPGNRTGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVTECEQKKLAKMQLHGIAQPVTAVALATASLQTEKDN
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(27113910..27113986,27117521..27117665,27121347..27121431,27124300..27124545,27130321..27130515,27134623..27134676,27136521..27136661,27136906..27137098,27141315..27141543)
location: region:27113910-27141543:1
so has part: feature:27113910-27113986:1:exon
so has part: feature:27117521-27117665:1:exon
so has part: feature:27121347-27121431:1:exon
so has part: feature:27124300-27124545:1:exon
so has part: feature:27130321-27130515:1:exon
so has part: feature:27134623-27134676:1:exon
so has part: feature:27136521-27136661:1:exon
so has part: feature:27136906-27137098:1:exon
so has part: feature:27141315-27141543:1:exon

XP_005260996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27113910-27113986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27117521-27117665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27121347-27121431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27124300-27124545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27130321-27130515:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27134623-27134676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27136521-27136661:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27136906-27137098:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27141315-27141543:1:exon

GABPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: E4TF1-60
alternative label: E4TF1A
alternative label: NFT2
alternative label: NRF2
alternative label: NRF2A
alternative label: RCH04A07
gene: GABPA
gene synonym: E4TF1-60; E4TF1A; NFT2; NRF2; NRF2A; RCH04A07
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein alpha chain isoform X3
translation: MTKREAEELIEIEIDGTEKAECTEESIVEQTYAPAECVSQAIDINEPIGNLKKLLEPRLQCSLDAHEICLQDIQLDPERSLFDQGVKTDGTVQLSVQVISYQGIEPKLNILEIVKPADTVEVVIDPDAHHAESEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERLGIPYDPIQWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPRGEILWSHLELLRKYVLASQEQQMNEIVTIDQPVQIIPASVQSATPTTIKVINSSAKAAKVQRAPRISGEDRSSPGNRTGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVTECEQKKLAKMQLHGIAQPVTAVALATASLQTEKDN
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(27113910..27113986,27117521..27117665,27121347..27121431,27124300..27124545,27130321..27130515,27134623..27134676,27136521..27136661,27136906..27137098,27141315..27141543)
location: region:27113910-27141543:1
so has part: feature:27113910-27113986:1:exon
so has part: feature:27117521-27117665:1:exon
so has part: feature:27121347-27121431:1:exon
so has part: feature:27124300-27124545:1:exon
so has part: feature:27130321-27130515:1:exon
so has part: feature:27134623-27134676:1:exon
so has part: feature:27136521-27136661:1:exon
so has part: feature:27136906-27137098:1:exon
so has part: feature:27141315-27141543:1:exon

XP_005260997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27113910-27113986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27117521-27117665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27121347-27121431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27124300-27124545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27130321-27130515:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27134623-27134676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27136521-27136661:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27136906-27137098:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27141315-27141543:1:exon

APP
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: AAA
alternative label: ABETA
alternative label: ABPP
alternative label: AD1
alternative label: APPI
alternative label: CTFgamma
alternative label: CVAP
alternative label: PN-II
alternative label: PN2
gene: APP
gene synonym: AAA; ABETA; ABPP; AD1; APPI; CTFgamma; CVAP; PN-II; PN2
note: amyloid beta (A4) precursor protein; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(27252861..27543446)
location: region:27252861-27543446:-1
so has part: feature:27252861-27543446:-1:exon
subclass of: SO_0000010

351
type: Gene
SIO_000068: ncbigene

HGNC:620
type: HGNC
SIO_000068: hgnc

104760
type: OMIM
SIO_000068: omim

position:27252861:-1
position: 27252861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27543446:-1
position: 27543446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27252861-27543446:-1:exon

APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: AAA
alternative label: ABETA
alternative label: ABPP
alternative label: AD1
alternative label: APPI
alternative label: CTFgamma
alternative label: CVAP
alternative label: PN-II
alternative label: PN2
gene: APP
gene synonym: AAA; ABETA; ABPP; AD1; APPI; CTFgamma; CVAP; PN-II; PN2
product: amyloid beta (A4) precursor protein, transcript variant 7
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001136131.2
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
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urn:…
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SIO_000628: feature:27543303-27543446:-1:exon

position:27543303:-1
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:27277336-27277389:-1:exon

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urn:…
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urn:…
SIO_000300: 16
SIO_000628: feature:27252861-27254082:-1:exon

position:27254082:-1
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type: ReverseStrandPosition
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APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: AAA
alternative label: ABETA
alternative label: ABPP
alternative label: AD1
alternative label: APPI
alternative label: CTFgamma
alternative label: CVAP
alternative label: PN-II
alternative label: PN2
gene: APP
gene synonym: AAA; ABETA; ABPP; AD1; APPI; CTFgamma; CVAP; PN-II; PN2
product: amyloid beta (A4) precursor protein, transcript variant 5
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001136129.2
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(27252861..27254082,27264034..27264180,27269885..27269985,27277336..27277389,27284053..27284274,27326904..27327003,27327941..27328069,27347383..27347541,27348267..27348341,27354657..27354790,27394156..27394358,27423316..27423509,27425552..27425664,27462259..27462388,27542882..27543138))
location: region:27252861-27543138:-1
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position:27543138:-1
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urn:…
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SIO_000628: feature:27542882-27543138:-1:exon

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urn:…
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SIO_000628: feature:27423316-27423509:-1:exon

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SIO_000628: feature:27394156-27394358:-1:exon

urn:…
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SIO_000628: feature:27354657-27354790:-1:exon

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SIO_000628: feature:27348267-27348341:-1:exon

urn:…
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SIO_000628: feature:27347383-27347541:-1:exon

urn:…
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SIO_000628: feature:27327941-27328069:-1:exon

urn:…
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SIO_000628: feature:27326904-27327003:-1:exon

urn:…
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SIO_000628: feature:27284053-27284274:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27277336-27277389:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27269885-27269985:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27264034-27264180:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27252861-27254082:-1:exon

APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: AAA
alternative label: ABETA
alternative label: ABPP
alternative label: AD1
alternative label: APPI
alternative label: CTFgamma
alternative label: CVAP
alternative label: PN-II
alternative label: PN2
gene: APP
gene synonym: AAA; ABETA; ABPP; AD1; APPI; CTFgamma; CVAP; PN-II; PN2
product: amyloid beta (A4) precursor protein, transcript variant 6
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001136130.2
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(27252861..27254082,27264034..27264180,27269885..27269985,27277336..27277389,27284053..27284274,27326904..27327003,27327941..27328069,27347383..27347541,27348267..27348341,27354657..27354790,27369675..27369731,27372330..27372497,27394156..27394358,27423316..27423509,27425552..27425664,27462259..27462388,27542882..27543138))
location: region:27252861-27543138:-1
so has part: feature:27542882-27543138:-1:exon
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urn:…
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urn:…
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SIO_000628: feature:27394156-27394358:-1:exon

urn:…
SIO_000300: 6
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urn:…
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SIO_000628: feature:27369675-27369731:-1:exon

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reference: sequence
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urn:…
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SIO_000628: feature:27354657-27354790:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27348267-27348341:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27347383-27347541:-1:exon

urn:…
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SIO_000628: feature:27327941-27328069:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27326904-27327003:-1:exon

urn:…
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SIO_000628: feature:27284053-27284274:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27277336-27277389:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27269885-27269985:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27264034-27264180:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:27252861-27254082:-1:exon

APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: AAA
alternative label: ABETA
alternative label: ABPP
alternative label: AD1
alternative label: APPI
alternative label: CTFgamma
alternative label: CVAP
alternative label: PN-II
alternative label: PN2
gene: APP
gene synonym: AAA; ABETA; ABPP; AD1; APPI; CTFgamma; CVAP; PN-II; PN2
product: amyloid beta (A4) precursor protein, transcript variant 10
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001204303.1
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(27252861..27254082,27264034..27264180,27269885..27269985,27284053..27284274,27326904..27327003,27327941..27328069,27347383..27347541,27348267..27348341,27354657..27354790,27394156..27394358,27423316..27423509,27425552..27425664,27462259..27462388,27484296..27484463,27542882..27543138))
location: region:27252861-27543138:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:27542882-27543138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27484296-27484463:-1:exon

urn:…
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SIO_000628: feature:27462259-27462388:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27425552-27425664:-1:exon

urn:…
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SIO_000628: feature:27423316-27423509:-1:exon

urn:…
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SIO_000628: feature:27394156-27394358:-1:exon

urn:…
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SIO_000628: feature:27354657-27354790:-1:exon

urn:…
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SIO_000628: feature:27348267-27348341:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27347383-27347541:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27327941-27328069:-1:exon

urn:…
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SIO_000628: feature:27326904-27327003:-1:exon

urn:…
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SIO_000628: feature:27284053-27284274:-1:exon

urn:…
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SIO_000628: feature:27269885-27269985:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27264034-27264180:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27252861-27254082:-1:exon

APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: AAA
alternative label: ABETA
alternative label: ABPP
alternative label: AD1
alternative label: APPI
alternative label: CTFgamma
alternative label: CVAP
alternative label: PN-II
alternative label: PN2
gene: APP
gene synonym: AAA; ABETA; ABPP; AD1; APPI; CTFgamma; CVAP; PN-II; PN2
product: amyloid beta (A4) precursor protein, transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_201414.2
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(27252861..27254082,27264034..27264180,27269885..27269985,27277336..27277389,27284053..27284274,27326904..27327003,27327941..27328069,27347383..27347541,27348267..27348341,27354657..27354790,27394156..27394358,27423316..27423509,27425552..27425664,27462259..27462388,27484296..27484463,27542882..27543138))
location: region:27252861-27543138:-1
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urn:…
SIO_000300: 1
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urn:…
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SIO_000628: feature:27484296-27484463:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:27347383-27347541:-1:exon

urn:…
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SIO_000628: feature:27327941-27328069:-1:exon

urn:…
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SIO_000628: feature:27326904-27327003:-1:exon

urn:…
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urn:…
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SIO_000628: feature:27277336-27277389:-1:exon

urn:…
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SIO_000628: feature:27269885-27269985:-1:exon

urn:…
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SIO_000628: feature:27264034-27264180:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27252861-27254082:-1:exon

APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: AAA
alternative label: ABETA
alternative label: ABPP
alternative label: AD1
alternative label: APPI
alternative label: CTFgamma
alternative label: CVAP
alternative label: PN-II
alternative label: PN2
gene: APP
gene synonym: AAA; ABETA; ABPP; AD1; APPI; CTFgamma; CVAP; PN-II; PN2
product: amyloid beta (A4) precursor protein, transcript variant 9
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001204302.1
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
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APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: AAA
alternative label: ABETA
alternative label: ABPP
alternative label: AD1
alternative label: APPI
alternative label: CTFgamma
alternative label: CVAP
alternative label: PN-II
alternative label: PN2
gene: APP
gene synonym: AAA; ABETA; ABPP; AD1; APPI; CTFgamma; CVAP; PN-II; PN2
product: amyloid beta (A4) precursor protein, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_201413.2
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
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urn:…
SIO_000300: 17
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APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: AAA
alternative label: ABETA
alternative label: ABPP
alternative label: AD1
alternative label: APPI
alternative label: CTFgamma
alternative label: CVAP
alternative label: PN-II
alternative label: PN2
gene: APP
gene synonym: AAA; ABETA; ABPP; AD1; APPI; CTFgamma; CVAP; PN-II; PN2
product: amyloid beta (A4) precursor protein, transcript variant 8
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001204301.1
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
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urn:…
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APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: AAA
alternative label: ABETA
alternative label: ABPP
alternative label: AD1
alternative label: APPI
alternative label: CTFgamma
alternative label: CVAP
alternative label: PN-II
alternative label: PN2
gene: APP
gene synonym: AAA; ABETA; ABPP; AD1; APPI; CTFgamma; CVAP; PN-II; PN2
product: amyloid beta (A4) precursor protein, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_000484.3
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
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