An ontology for describing microbial phenotypes
Microbial phenotype
A structured controlled vocabrary for describing microbial phenotypes
Morphology
The form and structure of microbes and their specific structural features
Cell shape
Bean shape
Bean
Bean-shaped
Sphere-shaped (MPO_01016) was merged to this class (MPO_01003) and the label and prefferred label were changed from Coccus to Sphere
球菌
Sphere shape
Coccoid
Sphere
Coccus-shaped
Sphere-shaped
Coccus
Crescent shape
Crescent-shaped
Crescent
Curved shape
Curved-shaped
Curved
Disc shape
Disc
Disc-shaped
Filament shape
Filament
Filament-shaped
Flask shape
Flask
Flask-shaped
Fusiform shape
Fusiform-shaped
Fusiform
Helical shape
Helical
Helical-shaped
Open-ring shape
Open-ring
Open-ring-shaped
Oval shape
Oval
Oval-shaped
Ovoid shape
Ovoid
Ovoid-shaped
Pleomorphic shape
Pleomorphic
Pleomorphic-shaped
Rod shape
桿菌
Rod-shaped
Bacillus
Rod
Spindle shape
Spindle
Spiral shape
Spiral
Spiral-shaped
Spore shape
Spore-shaped
Spore
Square shape
Square
Square-shaped
Star shape
Star
Star-shaped
Vibrio shape
Vibrio-shaped
Vibrio
Spirochete shape
Spirochete
Spirochete-shaped
Spirillum shape
Spirillum
Cell arrangement
Single arrangement
Singles
Single
Pair arrangement
Pair
Pairs
Tetrad arrangement
Tetrad
Tetrads
Chain arrangement
Chains
Chain
Filament arrangement
Filaments
Cluster arrangement
Clusters
Cluster
Irregular colony
V-shaped form arrangement
V-shaped forms
V-shaped form
Filamentous arrangement
Filamentous
Diplococcus arrangement
Diplococcus
Diplobacillus arrangement
Diplobacillus
Diplococcus encapsulated arrangement
Diplococcus encapsulated
Streptococcus arrangement
Streptococcus
Streptobacillus arrangement
Streptobacillus
Sarcina arrangement
Sarcina
Staphylococcus arrangement
Staphylococcus
Sheathed arrangement
Sheathed
Motility
Motile
Nonmotile
走性
Taxis
動性
Kinesis
走気性
Aerotaxis
走圧性
Barotaxis
走化性
Chemotaxis
Energy taxis
電気走性
Galvanotaxis
Electrotaxis
走磁性
Magnetotaxis
走地性
Gravitaxis
Geotaxis
走水質
Hydrotaxis
走光性
Phototaxis
Scotophobotaxis
走流性
Rheotaxis
Thermotaxis
接触走性
Thigmotaxis
Orthokinesis
Kinokinesis
Chemokinesis
Photokinesis
Gliding motility
Twitching motility
Swarming motility
Swimming motility
Darting motility
Tumbling motility
Sliding motility
Floating motility
Environmental growth condition
好熱性
Thermophilic
Thermophile
A microbial organism that thrives at relatively high temperatures, between 45 and 122 C (113 and 252 F).
超好熱性
Hyperthermophilic
Hyperthermophile
A subset of obligate thermophiles for which optimal growth temperatures are above 80C.
好冷性
Psychrophilic
Psychrophile
Cryophile
Microbial organisms that are capable of growth and reproduction in cold temperatures, ranging from −15 C to +10 C
偏性好熱性
Obligate thermophilic
Extreme thermophile
Obligate thermophile
通性好熱性
Facultative thermophilic
Facultative thermophile
耐塩性
Classification of growth salinity
好塩性微生物
Halophile
Halophilic
Halotolerant
耐塩性微生物
Classification of growth pH
好酸性微生物
Acidophilic
Acidophile
好アルカリ性微生物
Alkaliphilic
Alkaliphile
Alkalophile
Alkalinophile
Basophile
Neutrophilic
Neutrophile
温度許容度
Classification of growth temperature
Temperature tolerance
Classification of growth pressure
Peizophilic
好高圧性
Peizophile
偏性好高圧微生物
Obligate piezophilic
Obligate piezophile
通性好高圧微生物
Facultative piezophilic
Facultative piezophile
放射線耐性
Radioresistant
Psychrotrophic
Psychrotrophile
耐熱性
Thermotolerant
耐寒性
Psychrotolerant
中等温度好性
Mesophilic
Mesophile
A mibrobial organism that thrives at moderate temperature, typically between 20 and 45 C (68 and 113 F).
Alkalitolerant
Euryhaline
広塩性の
Stenohaline
狭塩性の
Metabolism related phenotype
Oxygen requirement
Aerobe
好気性微生物
Anaerobe
嫌気性微生物
偏性好気性微生物
Obligate aerobe
通性好気性微生物
Facultative aerobe
偏性嫌気微生物
Obligate anaerobe
通性嫌気微生物
Facultative anaerobe
Aerotolerant organism
Microaerophile
微好気性生物
Energy source
独立栄養
Autotrophic
Autotroph
従属栄養性
Heterotrophic
Heterotroph
無機栄養性
Lithotrophic
無機栄養細菌
Lithotroph
Methanotrophic
Methanotroph
Methylotrophic
Methylotroph
Oligotrophic
Oligotroph
Organotrophic
Organotroph
ジアゾ栄養生物
Diazotrophic
Diazotroph
光栄養
Phototrophic
Phototroph
Photosynthetic
Photosynthetic microbe
Mixotrophic
Mixotroph
化学合成生物
Chemotrophic
Chemotroph
Microanaerobe
Copiotrophic
Copiotroph
Photoorganotrophic
Photoorganotroph
Photolithotrophic
Photolithotroph
光従属栄養
Photoheterotrophic
Photoheterotroph
光独立栄養
Photoautotrophic
Photoautotroph
Photoorganoheterotrophic
Photoorganoheterotroph
Photoorganoautotrophic
Photoorganoautotroph
Photolithoheterotrophic
Photolithoheterotroph
Photolithoautotrophic
Photolithoautotroph
Chemoorganotrophic
Chemoorganotroph
Chemolithotrophic
Chemolithotroph
Chemoheterotrophic
Chemoheterotroph
Chemoautotrophic
Chemoautotroph
Chemoorganoheterotrophic
Chemoorganoheterotroph
Chemoorganoautotrophic
Chemoorganoautotroph
Chemolithoheterotrophic
Chemolithoheterotroph
独立栄養化学合成性
Chemolithoautotrophic
Chemolithoautotroph
独立栄養化学合成細菌
Lithoautotrophic
Lithoautotroph
Lithoheterotrophic
Lithoheterotroph
Carboxydotrophic
Carboxydotroph
Any organism that can tolerate a high concentration of carbon monoxide
栄養要求株
Auxotrophic
Capnophilic
Capnophile
Fermentation
Alcohol fermentation
Acetate fermentation
Lactate fermentation
Aceton-butanol fermentation
Phagotrophic
摂食栄養
Assimilation
Catabolism
Dissimilatory process
Nitrogen fixation
Biosynthesis
Lipid
Quinone
Benzoquinone
Naphthoquinone
MK-4
Menaquinone-4
MK-5
Menaquinone-5
MK-6
Menaquinone-6
MK-7
Menaquinone-7
MK-8
Menaquinone-8
MK-9
Menaquinone-9
MK-10
Menaquinone-10
MK-11
Menaquinone-11
MK-12
Menaquinone-12
MK-13
Menaquinone-13
MK-14
Menaquinone-14
MK-n
Menaquinone-n
Menaquinone
DMK
Demethylmenaquinone
DMK-5
Demethylmenaquinone-5
DMK-6
Demethylmenaquinone-6
DMK-7
Demethylmenaquinone-7
DMK-8
Demethylmenaquinone-8
MTK
Methionaquinone-7
MTK-7
Q-3
Ubiquinone-3
Q-4
Ubiquinone-4
Q-5
Ubiquinone-5
Q-6
Ubiquinone-6
Q-7
Ubiquinone-7
Q-8
Ubiquinone-8
Q-9
Ubiquinone-9
Ubiquinone-10
Ubiquinone-11
Ubiquinone-12
Ubiquinone-13
Ubiquinone-14
Ubiquinone
MQ-8
MDMQ
MDMQ-6
11-methylene-18-dimethyl-ubiquinone-6
TPQ
Thermoplasma quinone
TPQ-6
Thermoplasma quinone-6
TPQ-7
Thermoplasma quinone-7
MK-5(H2)
Menaquinone-5(H2)
MK-6(H2)
Menaquinone-6(H2)
MK-8(H2)
Menaquinone-8(H2)
MK-8(H4)
Menaquinone-8(H4)
MK-9(H0)
Menaquinone-9(H0)
MK-9(H2)
Menaquinone-9(H2)
MK-9(H4)
Menaquinone-9(H4)
MK-9(H6)
Menaquinone-9(H6)
MK-9(H8)
Menaquinone-9(H8)
MK-10(H4)
Menaquinone-10(H4)
MK-10(H6)
Menaquinone-10(H6)
MK-10(H8)
Menaquinone-10(H8)
MK-11(H6)
Menaquinone-11(H6)
MTK-7(H2)
Methionaquinone-7(H2)
MTK-7(H4)
Methionaquinone-7(H4)
TMK
TMK-6
RQ-8
Rhodoquinone-8
RQ-10
Rhodoquinone-10
MK-10(H2)
Menaquinone-10(H2)
MK-10(H0)
Menaquinone-10(H0)
MK-11(H4)
Menaquinone-11(H4)
MK-11(H2)
Menaquinone-11(H2)
MK-4(H6)
Menaquinone-4(H6)
MK-4(H8)
MK-5(H8)
Menaquinone-5(H8)
MK-5(H10)
Menaquinone-5(H10)
MK-6(H4)
Menaquinone-6(H4)
MK-6(H8)
Menaquinone-6(H8)
MK-6(H10)
Menaquinone-6(H10)
MK-7(H0)
Menaquinone-7(H0)
MK-7(H2)
Menaquinone-7(H2)
MK-7(H4)
Menaquinone-7(H4)
MK-7(H14)
Menaquinone-7(H14)
MK-8(H6)
Menaquinone-8(H6)
MK-9(H10)
MMK
Methylmenaquinone
MMK-5
Methylmenaquinone-5
MMK-6
Methylmenaquinone-6
MMK-7
Methylmenaquinone-7
MMK-8
Methylmenaquinone-8
MMK-5(H10)
Methylmenaquinone-5(H10)
MMK-6(H12)
Methylmenaquinone-6(H12)
MTK-6
Ubiquinone-10(H2)
Ubiquinone-10(H4)
Smaragdiquinone
SQA-8
Smaragdiquinone A-8
SQB-8
Smaragdiquinone B-8
Organoheterotrophic
Organoheterotroph
Obligate chemolithoautotrophic
偏性独立栄養化学合成性
Obligate chemoautolithotroph
Obligate chemolithoautotroph
偏性独立栄養化学合成細菌
Development
Resting spore forming
休眠胞子形成
Akinete forming
アキネート形成
Hetelocyst forming
Serotype
Staining
Cell staining
細胞染色
Gram stain
グラム染色
Gram positive
グラム陽性
Gram+
グラム陰性
Gram negative
Gram-
Gram variable
Ziehl–Neelsen stain
抗酸染色
acid-fast stain
Cell accumulation
Algae bloom
水の華
Red tide
赤潮
Cyanobacterial water bloom
アオコ
Way of life
Planktonic
Benthic
Epilithic
Lithophyte
Aerial
show phenotypes
show cell shape
oxygen requirement
temperature range
growth pH
optimal growth pH
minimum growth pH
maximum growth pH
growth temperature
optimal growth temperature
minimum growth temperature
maximum growth temperature
pH preference
show motility
salinity preference
show cell arrangement
produce quinones
produce antibiotics
representative morphology
minimum optimal growth temperature
maximum optimal growth temperature
minimum optimal growth ph
maximum optimal growth ph
staining
evergy source
energy source
show morphology
primary nutritional groups
growth salinity
maximal growth salinity
minimum growth salinity
optimal growth salinity
maximum optimal growth salinity
minimum optimal growth salinity
Sexual reproduction
Heterothallic
自家不和合性
Homothallic
自家和合性
Isogamy
Anisogamy
Heterogamy
Dioecious
Monoecious