NC 000024.9
type: Entry
definition: Homo sapiens chromosome Y, GRCh37.p13 Primary Assembly.
comment: Homo sapiens chromosome Y, GRCh37.p13 Primary Assembly.
sequence version: NC_000024.9
sequence date: 2013-08-13
sequence: sequence
division: CON
dblink: PRJNA168
keyword: RefSeq
source: Homo sapiens (human)
organism: Homo sapiens
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
reference: reference.1
reference: reference.2
reference: reference.3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000686.1.\nOn Jun 10, 2009 this sequence version replaced gi:89161220.\nAssembly Name: GRCh37.p13 Primary Assembly\nThe DNA sequence is composed of genomic sequence, primarily\nfinished clones that were sequenced as part of the Human Genome\nProject. PCR products and WGS shotgun sequence have been added\nwhere necessary to fill gaps or correct errors. All such additions\nare manually curated by GRC staff. For more information see:\nhttp://genomereference.org.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Homo sapiens Annotation Release 105\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 5.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000001
sequence length: 59373566
topology: linear
so has quality: SO_0000987
location: 1..59373566
location: region:1-59373566:1
RO_0002162: 9606

GI:224589823
type: GI
SIO_000068: ncbigi

PRJNA168
type: BioProject
SIO_000068: bioproject

reference.1
SIO_000300: 1
title: Finishing the euchromatic sequence of the human genome
journal: Nature
volume: 431
issue: 7011
pages: 931-945
year: 2004
pubmed: 15496913

15496913
type: PubMed
SIO_000068: pubmed

reference.2
SIO_000300: 2
title: The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes
author: Skaletsky, H.
author: Kuroda-Kawaguchi, T.
author: Minx, P.J.
author: Cordum, H.S.
author: Hillier, L.
author: Brown, L.G.
author: Repping, S.
author: Pyntikova, T.
author: Ali, J.
author: Bieri, T.
author: Chinwalla, A.
author: Delehaunty, A.
author: Delehaunty, K.
author: Du, H.
author: Fewell, G.
author: Fulton, L.
author: Fulton, R.
author: Graves, T.
author: Hou, S.F.
author: Latrielle, P.
author: Leonard, S.
author: Mardis, E.
author: Maupin, R.
author: McPherson, J.
author: Miner, T.
author: Nash, W.
author: Nguyen, C.
author: Ozersky, P.
author: Pepin, K.
author: Rock, S.
author: Rohlfing, T.
author: Scott, K.
author: Schultz, B.
author: Strong, C.
author: Tin-Wollam, A.
author: Yang, S.P.
author: Waterston, R.H.
author: Wilson, R.K.
author: Rozen, S.
author: Page, D.C.
journal: Nature
volume: 423
issue: 6942
pages: 825-837
year: 2003
pubmed: 12815422

12815422
type: PubMed
SIO_000068: pubmed

reference.3
SIO_000300: 3
title: Initial sequencing and analysis of the human genome
author: Lander, E.S.
author: Linton, L.M.
author: Birren, B.
author: Nusbaum, C.
author: Zody, M.C.
author: Baldwin, J.
author: Devon, K.
author: Dewar, K.
author: Doyle, M.
author: FitzHugh, W.
author: Funke, R.
author: Gage, D.
author: Harris, K.
author: Heaford, A.
author: Howland, J.
author: Kann, L.
author: Lehoczky, J.
author: LeVine, R.
author: McEwan, P.
author: McKernan, K.
author: Meldrim, J.
author: Mesirov, J.P.
author: Miranda, C.
author: Morris, W.
author: Naylor, J.
author: Raymond, C.
author: Rosetti, M.
author: Santos, R.
author: Sheridan, A.
author: Sougnez, C.
author: Stange-Thomann, N.
author: Stojanovic, N.
author: Subramanian, A.
author: Wyman, D.
author: Rogers, J.
author: Sulston, J.
author: Ainscough, R.
author: Beck, S.
author: Bentley, D.
author: Burton, J.
author: Clee, C.
author: Carter, N.
author: Coulson, A.
author: Deadman, R.
author: Deloukas, P.
author: Dunham, A.
author: Dunham, I.
author: Durbin, R.
author: French, L.
author: Grafham, D.
author: Gregory, S.
author: Hubbard, T.
author: Humphray, S.
author: Hunt, A.
author: Jones, M.
author: Lloyd, C.
author: McMurray, A.
author: Matthews, L.
author: Mercer, S.
author: Milne, S.
author: Mullikin, J.C.
author: Mungall, A.
author: Plumb, R.
author: Ross, M.
author: Shownkeen, R.
author: Sims, S.
author: Waterston, R.H.
author: Wilson, R.K.
author: Hillier, L.W.
author: McPherson, J.D.
author: Marra, M.A.
author: Mardis, E.R.
author: Fulton, L.A.
author: Chinwalla, A.T.
author: Pepin, K.H.
author: Gish, W.R.
author: Chissoe, S.L.
author: Wendl, M.C.

11237011
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59373566:1
position: 59373566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-59373566:1:source
so part of: sequence
organism: Homo sapiens
mol type: genomic DNA
chromosome: Y

9606
type: Taxonomy
SIO_000068: taxonomy

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 10000
gap type: telomere
so part of: sequence
location: 1..10000
location: region:1-10000:1
so has part: feature:1-10000:1:region

position:10000:1
position: 10000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-10000:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 44822..94821
location: region:44822-94821:1
so has part: feature:44822-94821:1:region

position:44822:1
position: 44822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94821:1
position: 94821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44822-94821:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 181385..231384
location: region:181385-231384:1
so has part: feature:181385-231384:1:region

position:181385:1
position: 181385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231384:1
position: 231384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181385-231384:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 997558..1047557
location: region:997558-1047557:1
so has part: feature:997558-1047557:1:region

position:997558:1
position: 997558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047557:1
position: 1047557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997558-1047557:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 1084114..1134113
location: region:1084114-1134113:1
so has part: feature:1084114-1134113:1:region

position:1084114:1
position: 1084114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134113:1
position: 1134113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1084114-1134113:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 1214235..1264234
location: region:1214235-1264234:1
so has part: feature:1214235-1264234:1:region

position:1214235:1
position: 1214235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1264234:1
position: 1264234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1214235-1264234:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 2018239..2068238
location: region:2018239-2068238:1
so has part: feature:2018239-2068238:1:region

position:2018239:1
position: 2018239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068238:1
position: 2068238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2018239-2068238:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 8914956..8964955
location: region:8914956-8964955:1
so has part: feature:8914956-8964955:1:region

position:8914956:1
position: 8914956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8964955:1
position: 8964955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8914956-8964955:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 9241323..9291322
location: region:9241323-9291322:1
so has part: feature:9241323-9291322:1:region

position:9241323:1
position: 9241323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9291322:1
position: 9291322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9241323-9291322:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 3000000
gap type: centromere
so part of: sequence
location: 10104554..13104553
location: region:10104554-13104553:1
so has part: feature:10104554-13104553:1:region

position:10104554:1
position: 10104554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13104553:1
position: 13104553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10104554-13104553:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 13143955..13193954
location: region:13143955-13193954:1
so has part: feature:13143955-13193954:1:region

position:13143955:1
position: 13143955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13193954:1
position: 13193954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13143955-13193954:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 13748579..13798578
location: region:13748579-13798578:1
so has part: feature:13748579-13798578:1:region

position:13748579:1
position: 13748579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13798578:1
position: 13798578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13748579-13798578:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 23901429..23951428
location: region:23901429-23951428:1
so has part: feature:23901429-23951428:1:region

position:23901429:1
position: 23901429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23951428:1
position: 23951428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23901429-23951428:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 30000000
gap type: heterochromatin
so part of: sequence
location: 28819362..58819361
location: region:28819362-58819361:1
so has part: feature:28819362-58819361:1:region

position:28819362:1
position: 28819362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58819361:1
position: 58819361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28819362-58819361:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 58917657..58967656
location: region:58917657-58967656:1
so has part: feature:58917657-58967656:1:region

position:58917657:1
position: 58917657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58967656:1
position: 58967656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58917657-58967656:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9606
estimated length: 10000
gap type: telomere
so part of: sequence
location: 59363567..59373566
location: region:59363567-59373566:1
so has part: feature:59363567-59373566:1:region

position:59363567:1
position: 59363567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59363567-59373566:1:region

PLCXD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
note: phosphatidylinositol-specific phospholipase C, X domain containing 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 142991..>170023
location: region:142991-170023:1
so has part: feature:142991-170023:1:exon
subclass of: SO_0000010

55344
type: Gene
SIO_000068: ncbigene

23148
type: HGNC
SIO_000068: hgnc

06516
type: HPRD
SIO_000068: hprd

position:142991:1
position: 142991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170023:1
position: 170023
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142991-170023:1:exon

PLCXD1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
product: phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_028057.1
SIO_010081: PLCXD1
so part of: PLCXD1
location: join(142991..143061,148149..148351,150834..150981,155400..155536,157315..157443,158166..158321,159702..159885,165764..166059,169260..>170023)
location: region:142991-170023:1
so has part: feature:142991-143061:1:exon
so has part: feature:148149-148351:1:exon
so has part: feature:150834-150981:1:exon
so has part: feature:155400-155536:1:exon
so has part: feature:157315-157443:1:exon
so has part: feature:158166-158321:1:exon
so has part: feature:159702-159885:1:exon
so has part: feature:165764-166059:1:exon
so has part: feature:169260-170023:1:exon

GI:254039598
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:142991-143061:1:exon

position:143061:1
position: 143061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:148149-148351:1:exon

position:148149:1
position: 148149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148351:1
position: 148351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:150834-150981:1:exon

position:150834:1
position: 150834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150981:1
position: 150981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:155400-155536:1:exon

position:155400:1
position: 155400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155536:1
position: 155536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:157315-157443:1:exon

position:157315:1
position: 157315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157443:1
position: 157443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:158166-158321:1:exon

position:158166:1
position: 158166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158321:1
position: 158321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:159702-159885:1:exon

position:159702:1
position: 159702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159885:1
position: 159885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:165764-166059:1:exon

position:165764:1
position: 165764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166059:1
position: 166059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:169260-170023:1:exon

position:169260:1
position: 169260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLCXD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
product: phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_018390.3
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(148061..148351,150834..150981,155400..155536,157315..157443,158166..158321,159702..159885,165764..170023)
location: region:148061-170023:1
so has part: feature:148061-148351:1:exon
so has part: feature:150834-150981:1:exon
so has part: feature:155400-155536:1:exon
so has part: feature:157315-157443:1:exon
so has part: feature:158166-158321:1:exon
so has part: feature:159702-159885:1:exon
so has part: feature:165764-170023:1:exon

GI:254039597
type: GI
SIO_000068: ncbigi

position:148061:1
position: 148061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148061-148351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150834-150981:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155400-155536:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157315-157443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158166-158321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:159702-159885:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165764-170023:1:exon

PLCXD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: PI-PLC X domain-containing protein 1
translation: MGGQVSASNSFSRLHCRNANEDWMSALCPRLWDVPLHHLSIPGSHDTMTYCLNKKSPISHEESRLLQLLNKALPCITRPVVLKWSVTQALDVTEQLDAGVRYLDLRIAHMLEGSEKNLHFVHMVYTTALVEDTLTEISEWLERHPREVVILACRNFEGLSEDLHEYLVACIKNIFGDMLCPRGEVPTLRQLWSRGQQVIVSYEDESSLRRHHELWPGVPYWWGNRVKTEALIRYLETMKSCGRPGGLFVAGINLTENLQYVLAHPSESLEKMTLPNLPRLSAWVREQCPGPGSRCTNIIAGDFIGADGFVSDVIALNQKLLWC
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(150855..150981,155400..155536,157315..157443,158166..158321,159702..159885,165764..166002)
location: region:150855-166002:1
so has part: feature:150855-150981:1:exon
so has part: feature:155400-155536:1:exon
so has part: feature:157315-157443:1:exon
so has part: feature:158166-158321:1:exon
so has part: feature:159702-159885:1:exon
so has part: feature:165764-166002:1:exon

NP_060860.1
type: Protein
SIO_000068: ncbiprotein

GI:8922995
type: GI
SIO_000068: ncbigi

CCDS14103.1
type: CCDS
SIO_000068: ccds

position:150855:1
position: 150855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166002:1
position: 166002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150855-150981:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155400-155536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157315-157443:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158166-158321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159702-159885:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165764-166002:1:exon

GTPBP6
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: PGPL
gene: GTPBP6
gene synonym: PGPL
note: GTP binding protein 6 (putative); Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(171426..>180887)
location: region:171426-180887:-1
so has part: feature:171426-180887:-1:exon
subclass of: SO_0000010

8225
type: Gene
SIO_000068: ncbigene

30189
type: HGNC
SIO_000068: hgnc

300124
type: OMIM
SIO_000068: omim

position:171426:-1
position: 171426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180887:-1
position: 180887
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171426-180887:-1:exon

GTPBP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: PGPL
gene: GTPBP6
gene synonym: PGPL
product: GTP binding protein 6 (putative)
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_012227.2
exception: annotated by transcript or proteomic data
note: The RefSeq transcript aligns at 63% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_012227.2
SIO_010081: GTPBP6
subclass of: SO_0000673
so part of: GTPBP6
location: complement(join(171426..171864,174027..174179,174399..174547,178086..178294,179433..179591,180817..>180887))
location: region:171426-180887:-1
so has part: feature:180817-180887:-1:exon
so has part: feature:179433-179591:-1:exon
so has part: feature:178086-178294:-1:exon
so has part: feature:174399-174547:-1:exon
so has part: feature:174027-174179:-1:exon
so has part: feature:171426-171864:-1:exon

GI:304435904
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:180817-180887:-1:exon

position:180817:-1
position: 180817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179433-179591:-1:exon

position:179433:-1
position: 179433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179591:-1
position: 179591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:178086-178294:-1:exon

position:178086:-1
position: 178086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178294:-1
position: 178294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:174399-174547:-1:exon

position:174399:-1
position: 174399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174547:-1
position: 174547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:174027-174179:-1:exon

position:174027:-1
position: 174027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174179:-1
position: 174179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:171426-171864:-1:exon

position:171864:-1
position: 171864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTPBP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: PGPL
gene: GTPBP6
gene synonym: PGPL
inference: similar to AA sequence (same species):RefSeq:NP_036359.2
exception: annotated by transcript or proteomic data
note: The RefSeq protein aligns at 55% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 2
product: putative GTP-binding protein 6
translation: MWALRAAVRPGLRLSRVGRGRSAPRAAAPSCPARALAAVGRRSPGNLEGPWGGGRGLRADGGRSRTGDDEEEPEDADENAEEELLRGEPLLPAGTQRVCLVHPDVKWGPGKSQMTRAEWQVAEATALVHTLDGWSVVQTMVVSTKTPDRKLIFGKGNFEHLTEKIRGSPDVTCVFLNVERMAAPTKKELEAAWGVEVFDRFTVVLHIFRCNARTKEARLQVALAEMPLHRSNLKRDVAHLYRGVGSRYIMGSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVGYTNCGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKCSVLSTLRGLQLPAPLLDSMVEVHNKVDLVPGYSPTEPNVVPVSALRGHGLQELKAELDAAVLKATGRQILTLRVRLAGAQLSWLYKEATVQEVDVIPEDGAADVRVIISNSAYGKFRKLFPG
SIO_010081: GTPBP6
subclass of: SO_0000673
so part of: GTPBP6
location: complement(join(171741..171864,174027..174179,174399..174547,178086..178294,179433..179591,180817..>180887))
location: region:171741-180887:-1
so has part: feature:180817-180887:-1:exon
so has part: feature:179433-179591:-1:exon
so has part: feature:178086-178294:-1:exon
so has part: feature:174399-174547:-1:exon
so has part: feature:174027-174179:-1:exon
so has part: feature:171741-171864:-1:exon

NP_036359.2
type: Protein
SIO_000068: ncbiprotein

GI:304435905
type: GI
SIO_000068: ncbigi

position:171741:-1
position: 171741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180817-180887:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179433-179591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:178086-178294:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:174399-174547:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:174027-174179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171741-171864:-1:exon

LINC00685
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CXYorf10
alternative label: NCRNA00107
alternative label: PPP2R3B-AS1
gene: LINC00685
gene synonym: CXYorf10; NCRNA00107; PPP2R3B-AS1
note: long intergenic non-protein coding RNA 685; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: <231385..232067
location: region:231385-232067:1
so has part: feature:231385-232067:1:exon

283981
type: Gene
SIO_000068: ncbigene

27560
type: HGNC
SIO_000068: hgnc

position:231385:1
position: 231385
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:232067:1
position: 232067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231385-232067:1:exon

LINC00685
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: CXYorf10
alternative label: NCRNA00107
alternative label: PPP2R3B-AS1
gene: LINC00685
gene synonym: CXYorf10; NCRNA00107; PPP2R3B-AS1
product: long intergenic non-protein coding RNA 685, transcript variant 1
inference: similar to RNA sequence (same species):RefSeq:NR_027232.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript aligns at 31% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_027232.1
SIO_010081: LINC00685
so part of: LINC00685
location: <231385..232067
location: region:231385-232067:1
so has part: feature:231385-232067:1:exon

GI:224548996
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:231385-232067:1:exon

LINC00685
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: CXYorf10
alternative label: NCRNA00107
alternative label: PPP2R3B-AS1
gene: LINC00685
gene synonym: CXYorf10; NCRNA00107; PPP2R3B-AS1
product: long intergenic non-protein coding RNA 685, transcript variant 2
inference: similar to RNA sequence (same species):RefSeq:NR_027231.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript aligns at 44% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_027231.1
SIO_010081: LINC00685
so part of: LINC00685
location: <231385..232067
location: region:231385-232067:1
so has part: feature:231385-232067:1:exon

GI:224548995
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:231385-232067:1:exon

PPP2R3B
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48
note: protein phosphatase 2, regulatory subunit B'', beta; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(244668..297690)
location: region:244668-297690:-1
so has part: feature:244668-297690:-1:exon
subclass of: SO_0000010

28227
type: Gene
SIO_000068: ncbigene

13417
type: HGNC
SIO_000068: hgnc

02276
type: HPRD
SIO_000068: hprd

300339
type: OMIM
SIO_000068: omim

position:244668:-1
position: 244668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297690:-1
position: 297690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244668-297690:-1:exon

PPP2R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48
product: protein phosphatase 2, regulatory subunit B'', beta
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_013239.4
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(244668..245252,249339..249445,249513..249631,251500..251675,252042..252131,252618..252666,256251..256407,256909..256995,257436..257510,257969..258071,258325..258428,272140..272325,297103..297690))
location: region:244668-297690:-1
so has part: feature:297103-297690:-1:exon
so has part: feature:272140-272325:-1:exon
so has part: feature:258325-258428:-1:exon
so has part: feature:257969-258071:-1:exon
so has part: feature:257436-257510:-1:exon
so has part: feature:256909-256995:-1:exon
so has part: feature:256251-256407:-1:exon
so has part: feature:252618-252666:-1:exon
so has part: feature:252042-252131:-1:exon
so has part: feature:251500-251675:-1:exon
so has part: feature:249513-249631:-1:exon
so has part: feature:249339-249445:-1:exon
so has part: feature:244668-245252:-1:exon

GI:294489227
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:297103-297690:-1:exon

position:297103:-1
position: 297103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:272140-272325:-1:exon

position:272140:-1
position: 272140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272325:-1
position: 272325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:258325-258428:-1:exon

position:258325:-1
position: 258325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258428:-1
position: 258428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:257969-258071:-1:exon

position:257969:-1
position: 257969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258071:-1
position: 258071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:257436-257510:-1:exon

position:257436:-1
position: 257436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257510:-1
position: 257510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:256909-256995:-1:exon

position:256909:-1
position: 256909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256995:-1
position: 256995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:256251-256407:-1:exon

position:256251:-1
position: 256251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256407:-1
position: 256407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:252618-252666:-1:exon

position:252618:-1
position: 252618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252666:-1
position: 252666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:252042-252131:-1:exon

position:252042:-1
position: 252042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252131:-1
position: 252131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:251500-251675:-1:exon

position:251500:-1
position: 251500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251675:-1
position: 251675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:249513-249631:-1:exon

position:249513:-1
position: 249513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249631:-1
position: 249631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:249339-249445:-1:exon

position:249339:-1
position: 249339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249445:-1
position: 249445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:244668-245252:-1:exon

position:245252:-1
position: 245252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP2R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48
product: protein phosphatase 2, regulatory subunit B'', beta, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 35 ESTs, 8 Proteins, and 98% coverage by RNAseq alignments, including 1 sample with support for all introns
transcript id: XM_005274777.1
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(244687..245252,249339..249445,249513..249631,251500..251675,252042..252131,252618..252666,256251..256407,256909..256995,257436..257510,257969..258071,258325..258428,272140..272325,272990..273067,297103..297690))
location: region:244687-297690:-1
so has part: feature:297103-297690:-1:exon
so has part: feature:272990-273067:-1:exon
so has part: feature:272140-272325:-1:exon
so has part: feature:258325-258428:-1:exon
so has part: feature:257969-258071:-1:exon
so has part: feature:257436-257510:-1:exon
so has part: feature:256909-256995:-1:exon
so has part: feature:256251-256407:-1:exon
so has part: feature:252618-252666:-1:exon
so has part: feature:252042-252131:-1:exon
so has part: feature:251500-251675:-1:exon
so has part: feature:249513-249631:-1:exon
so has part: feature:249339-249445:-1:exon
so has part: feature:244687-245252:-1:exon

GI:530422999
type: GI
SIO_000068: ncbigi

position:244687:-1
position: 244687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297103-297690:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272990-273067:-1:exon

position:272990:-1
position: 272990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273067:-1
position: 273067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:272140-272325:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:258325-258428:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:257969-258071:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:257436-257510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:256909-256995:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:256251-256407:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:252618-252666:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:252042-252131:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251500-251675:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:249513-249631:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:249339-249445:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:244687-245252:-1:exon

PPP2R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48
product: protein phosphatase 2, regulatory subunit B'', beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 35 ESTs, 10 Proteins, and 100% coverage by RNAseq alignments, including 8 samples with support for all introns
transcript id: XM_005274776.1
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(244687..245252,249339..249445,249513..249631,251500..251675,252042..252131,252618..252666,256251..256407,256909..256995,257436..257510,257969..258071,258325..258428,272140..272325,284267..284444))
location: region:244687-284444:-1
so has part: feature:284267-284444:-1:exon
so has part: feature:272140-272325:-1:exon
so has part: feature:258325-258428:-1:exon
so has part: feature:257969-258071:-1:exon
so has part: feature:257436-257510:-1:exon
so has part: feature:256909-256995:-1:exon
so has part: feature:256251-256407:-1:exon
so has part: feature:252618-252666:-1:exon
so has part: feature:252042-252131:-1:exon
so has part: feature:251500-251675:-1:exon
so has part: feature:249513-249631:-1:exon
so has part: feature:249339-249445:-1:exon
so has part: feature:244687-245252:-1:exon

GI:530422997
type: GI
SIO_000068: ncbigi

position:284444:-1
position: 284444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284267-284444:-1:exon

position:284267:-1
position: 284267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:272140-272325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258325-258428:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257969-258071:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:257436-257510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:256909-256995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:256251-256407:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252618-252666:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:252042-252131:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251500-251675:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:249513-249631:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:249339-249445:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244687-245252:-1:exon

PPP2R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta
translation: MPPGKVLQPVLKMKVDELFLYWLSEASTQRMLQDCLRRIKAPGRDQPTPGDGEQPGAWPTAPLAAPRPSGLEPPGTPGPGPALPLGAASSPRNAPHVRGTRRSAGTRVVQTRKEEPLPPATSQSIPTFYFPRGRPQDSVNVDAVISKIESTFARFPHERATMDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(245102..245252,249339..249445,249513..249631,251500..251675,252042..252131,252618..252666,256251..256407,256909..256995,257436..257510,257969..258071,258325..258428,272140..272325,297103..297426))
location: region:245102-297426:-1
so has part: feature:297103-297426:-1:exon
so has part: feature:272140-272325:-1:exon
so has part: feature:258325-258428:-1:exon
so has part: feature:257969-258071:-1:exon
so has part: feature:257436-257510:-1:exon
so has part: feature:256909-256995:-1:exon
so has part: feature:256251-256407:-1:exon
so has part: feature:252618-252666:-1:exon
so has part: feature:252042-252131:-1:exon
so has part: feature:251500-251675:-1:exon
so has part: feature:249513-249631:-1:exon
so has part: feature:249339-249445:-1:exon
so has part: feature:245102-245252:-1:exon

NP_037371.2
type: Protein
SIO_000068: ncbiprotein

GI:33695078
type: GI
SIO_000068: ncbigi

CCDS14104.1
type: CCDS
SIO_000068: ccds

position:245102:-1
position: 245102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297426:-1
position: 297426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297103-297426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272140-272325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258325-258428:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257969-258071:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:257436-257510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:256909-256995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:256251-256407:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252618-252666:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:252042-252131:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251500-251675:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:249513-249631:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:249339-249445:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:245102-245252:-1:exon

PPP2R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3
translation: MRLRERSLRQDPDLRQELASLARGCDFVLPSRFKKRLKAFQQVQTRKEEPLPPATSQSIPTFYFPRGRPQDSVNVDAVISKIESTFARFPHERATMDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(245102..245252,249339..249445,249513..249631,251500..251675,252042..252131,252618..252666,256251..256407,256909..256995,257436..257510,257969..258071,258325..258428,272140..272325,284267..284392))
location: region:245102-284392:-1
so has part: feature:284267-284392:-1:exon
so has part: feature:272140-272325:-1:exon
so has part: feature:258325-258428:-1:exon
so has part: feature:257969-258071:-1:exon
so has part: feature:257436-257510:-1:exon
so has part: feature:256909-256995:-1:exon
so has part: feature:256251-256407:-1:exon
so has part: feature:252618-252666:-1:exon
so has part: feature:252042-252131:-1:exon
so has part: feature:251500-251675:-1:exon
so has part: feature:249513-249631:-1:exon
so has part: feature:249339-249445:-1:exon
so has part: feature:245102-245252:-1:exon

XP_005274833.1
type: Protein
SIO_000068: ncbiprotein

GI:530422998
type: GI
SIO_000068: ncbigi

position:284392:-1
position: 284392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284267-284392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272140-272325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258325-258428:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257969-258071:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:257436-257510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:256909-256995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:256251-256407:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252618-252666:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:252042-252131:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251500-251675:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:249513-249631:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:249339-249445:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:245102-245252:-1:exon

PPP2R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X4
translation: MDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(245102..245252,249339..249445,249513..249631,251500..251675,252042..252131,252618..252666,256251..256407,256909..256995,257436..257510,257969..258071,258325..258428,272140..272166))
location: region:245102-272166:-1
so has part: feature:272140-272166:-1:exon
so has part: feature:258325-258428:-1:exon
so has part: feature:257969-258071:-1:exon
so has part: feature:257436-257510:-1:exon
so has part: feature:256909-256995:-1:exon
so has part: feature:256251-256407:-1:exon
so has part: feature:252618-252666:-1:exon
so has part: feature:252042-252131:-1:exon
so has part: feature:251500-251675:-1:exon
so has part: feature:249513-249631:-1:exon
so has part: feature:249339-249445:-1:exon
so has part: feature:245102-245252:-1:exon

XP_005274834.1
type: Protein
SIO_000068: ncbiprotein

GI:530423000
type: GI
SIO_000068: ncbigi

position:272166:-1
position: 272166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272140-272166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:258325-258428:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:257969-258071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257436-257510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256909-256995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:256251-256407:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:252618-252666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252042-252131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:251500-251675:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:249513-249631:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:249339-249445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245102-245252:-1:exon

SHOX
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
note: short stature homeobox; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 535079..570146
location: region:535079-570146:1
so has part: feature:535079-570146:1:exon
subclass of: SO_0000010

6473
type: Gene
SIO_000068: ncbigene

10853
type: HGNC
SIO_000068: hgnc

02430
type: HPRD
SIO_000068: hprd

312865
type: OMIM
SIO_000068: omim

position:535079:1
position: 535079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570146:1
position: 570146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535079-570146:1:exon

SHOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
product: short stature homeobox, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_006883.2
SIO_010081: SHOX
subclass of: SO_0000673
so part of: SHOX
location: join(535079..535337,541201..541909,545353..545561,551556..551613,551734..551822,569520..570146)
location: region:535079-570146:1
so has part: feature:535079-535337:1:exon
so has part: feature:541201-541909:1:exon
so has part: feature:545353-545561:1:exon
so has part: feature:551556-551613:1:exon
so has part: feature:551734-551822:1:exon
so has part: feature:569520-570146:1:exon

GI:89257356
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:535079-535337:1:exon

position:535337:1
position: 535337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541201-541909:1:exon

position:541201:1
position: 541201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541909:1
position: 541909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:545353-545561:1:exon

position:545353:1
position: 545353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545561:1
position: 545561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:551556-551613:1:exon

position:551556:1
position: 551556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551613:1
position: 551613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:551734-551822:1:exon

position:551734:1
position: 551734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551822:1
position: 551822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:569520-570146:1:exon

position:569520:1
position: 569520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SHOX
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
product: short stature homeobox, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 73% coverage by RNAseq alignments
transcript id: XR_247322.1
SIO_010081: SHOX
so part of: SHOX
location: join(535079..535337,541201..541909,545353..545561,551556..551613,551734..551822,555126..557542,561493..562318)
location: region:535079-562318:1
so has part: feature:535079-535337:1:exon
so has part: feature:541201-541909:1:exon
so has part: feature:545353-545561:1:exon
so has part: feature:551556-551613:1:exon
so has part: feature:551734-551822:1:exon
so has part: feature:555126-557542:1:exon
so has part: feature:561493-562318:1:exon

GI:530423001
type: GI
SIO_000068: ncbigi

position:562318:1
position: 562318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535079-535337:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541201-541909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:545353-545561:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551556-551613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551734-551822:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555126-557542:1:exon

position:555126:1
position: 555126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557542:1
position: 557542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:561493-562318:1:exon

position:561493:1
position: 561493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SHOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
product: short stature homeobox, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_000451.3
SIO_010081: SHOX
subclass of: SO_0000673
so part of: SHOX
location: join(535079..535337,541201..541909,545353..545561,551556..551613,551734..551822,555126..557558)
location: region:535079-557558:1
so has part: feature:535079-535337:1:exon
so has part: feature:541201-541909:1:exon
so has part: feature:545353-545561:1:exon
so has part: feature:551556-551613:1:exon
so has part: feature:551734-551822:1:exon
so has part: feature:555126-557558:1:exon

GI:89257355
type: GI
SIO_000068: ncbigi

position:557558:1
position: 557558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535079-535337:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541201-541909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:545353-545561:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551556-551613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551734-551822:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555126-557558:1:exon

SHOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
note: isoform SHOXb is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: short stature homeobox protein isoform SHOXb
translation: MEELTAFVSKSFDQKSKDGNGGGGGGGGKKDSITYREVLESGLARSRELGTSDSSLQDITEGGGHCPVHLFKDHVDNDKEKLKEFGTARVAEGIYECKEKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTANHLDACRVAPYVNMGALRMPFQQMEFCSCRPGWSIMA
SIO_010081: SHOX
subclass of: SO_0000673
so part of: SHOX
location: join(541633..541909,545353..545561,551556..551613,551734..551822,569520..569564)
location: region:541633-569564:1
so has part: feature:541633-541909:1:exon
so has part: feature:545353-545561:1:exon
so has part: feature:551556-551613:1:exon
so has part: feature:551734-551822:1:exon
so has part: feature:569520-569564:1:exon

NP_006874.1
type: Protein
SIO_000068: ncbiprotein

GI:6031203
type: GI
SIO_000068: ncbigi

CCDS14106.1
type: CCDS
SIO_000068: ccds

position:541633:1
position: 541633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569564:1
position: 569564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541633-541909:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545353-545561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551556-551613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551734-551822:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:569520-569564:1:exon

SHOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
note: isoform SHOXa is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: short stature homeobox protein isoform SHOXa
translation: MEELTAFVSKSFDQKSKDGNGGGGGGGGKKDSITYREVLESGLARSRELGTSDSSLQDITEGGGHCPVHLFKDHVDNDKEKLKEFGTARVAEGIYECKEKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTANHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL
SIO_010081: SHOX
subclass of: SO_0000673
so part of: SHOX
location: join(541633..541909,545353..545561,551556..551613,551734..551822,555126..555371)
location: region:541633-555371:1
so has part: feature:541633-541909:1:exon
so has part: feature:545353-545561:1:exon
so has part: feature:551556-551613:1:exon
so has part: feature:551734-551822:1:exon
so has part: feature:555126-555371:1:exon

NP_000442.1
type: Protein
SIO_000068: ncbiprotein

GI:4506943
type: GI
SIO_000068: ncbigi

CCDS14107.1
type: CCDS
SIO_000068: ccds

position:555371:1
position: 555371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541633-541909:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545353-545561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551556-551613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551734-551822:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:555126-555371:1:exon

LOC101927130
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC101927130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(555708..562829)
location: region:555708-562829:-1
so has part: feature:555708-562829:-1:exon

101927130
type: Gene
SIO_000068: ncbigene

position:555708:-1
position: 555708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562829:-1
position: 562829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555708-562829:-1:exon

LOC101927130
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC101927130
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
number: 6
pseudo: true
SIO_010081: LOC101927130
subclass of: SO_0000673
so part of: LOC101927130
location: complement(555708..555987)
location: region:555708-555987:-1
so has part: feature:555708-555987:-1:exon

position:555987:-1
position: 555987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555708-555987:-1:exon

LOC101927130
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC101927130
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
number: 5
pseudo: true
SIO_010081: LOC101927130
subclass of: SO_0000673
so part of: LOC101927130
location: complement(556350..556447)
location: region:556350-556447:-1
so has part: feature:556350-556447:-1:exon

position:556350:-1
position: 556350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556447:-1
position: 556447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556350-556447:-1:exon

LOC101927130
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC101927130
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
number: 4
pseudo: true
SIO_010081: LOC101927130
subclass of: SO_0000673
so part of: LOC101927130
location: complement(559362..559473)
location: region:559362-559473:-1
so has part: feature:559362-559473:-1:exon

position:559362:-1
position: 559362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559473:-1
position: 559473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559362-559473:-1:exon

LOC101927130
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC101927130
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
number: 3
pseudo: true
SIO_010081: LOC101927130
subclass of: SO_0000673
so part of: LOC101927130
location: complement(560945..561174)
location: region:560945-561174:-1
so has part: feature:560945-561174:-1:exon

position:560945:-1
position: 560945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561174:-1
position: 561174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560945-561174:-1:exon

LOC101927130
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC101927130
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
number: 2
pseudo: true
SIO_010081: LOC101927130
subclass of: SO_0000673
so part of: LOC101927130
location: complement(562726..562745)
location: region:562726-562745:-1
so has part: feature:562726-562745:-1:exon

position:562726:-1
position: 562726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562745:-1
position: 562745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562726-562745:-1:exon

LOC101927130
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC101927130
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
number: 1
pseudo: true
SIO_010081: LOC101927130
subclass of: SO_0000673
so part of: LOC101927130
location: complement(562814..562829)
location: region:562814-562829:-1
so has part: feature:562814-562829:-1:exon

position:562814:-1
position: 562814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562814-562829:-1:exon

LOC100652773
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC100652773
note: ribosomal protein L14 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(920464..920836)
location: region:920464-920836:-1
so has part: feature:920464-920836:-1:exon

100652773
type: Gene
SIO_000068: ncbigene

position:920464:-1
position: 920464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920836:-1
position: 920836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920464-920836:-1:exon

LOC100418703
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC100418703
note: repetin pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 1177562..1178938
location: region:1177562-1178938:1
so has part: feature:1177562-1178938:1:exon

100418703
type: Gene
SIO_000068: ncbigene

position:1177562:1
position: 1177562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178938:1
position: 1178938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177562-1178938:1:exon

CRLF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
note: cytokine receptor-like factor 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(<1264869..>1281529)
location: region:1264869-1281529:-1
so has part: feature:1264869-1281529:-1:exon
subclass of: SO_0000010

64109
type: Gene
SIO_000068: ncbigene

14281
type: HGNC
SIO_000068: hgnc

02288
type: HPRD
SIO_000068: hprd

300357
type: OMIM
SIO_000068: omim

position:1264869:-1
position: 1264869
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:1281529:-1
position: 1281529
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1264869-1281529:-1:exon

CRLF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
product: cytokine receptor-like factor 2, transcript variant 1
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_022148.2
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 9 substitutions and 2 indels and aligns at 50% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_022148.2
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(join(<1264869..1265014,1267419..1267581,1271272..1271405,1275326..1275492,1277699..1277801,1281449..>1281529))
location: region:1264869-1281529:-1
so has part: feature:1281449-1281529:-1:exon
so has part: feature:1277699-1277801:-1:exon
so has part: feature:1275326-1275492:-1:exon
so has part: feature:1271272-1271405:-1:exon
so has part: feature:1267419-1267581:-1:exon
so has part: feature:1264869-1265014:-1:exon

GI:19923095
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1281449-1281529:-1:exon

position:1281449:-1
position: 1281449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1277699-1277801:-1:exon

position:1277699:-1
position: 1277699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277801:-1
position: 1277801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1275326-1275492:-1:exon

position:1275326:-1
position: 1275326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275492:-1
position: 1275492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1271272-1271405:-1:exon

position:1271272:-1
position: 1271272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271405:-1
position: 1271405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1267419-1267581:-1:exon

position:1267419:-1
position: 1267419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267581:-1
position: 1267581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1264869-1265014:-1:exon

position:1265014:-1
position: 1265014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRLF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
product: cytokine receptor-like factor 2, transcript variant 2
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001012288.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 8 substitutions and 2 indels and aligns at 68% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001012288.1
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(join(<1264869..1265014,1267419..1267581,1271272..1271405,1275326..1275492,1281449..1281527))
location: region:1264869-1281527:-1
so has part: feature:1281449-1281527:-1:exon
so has part: feature:1275326-1275492:-1:exon
so has part: feature:1271272-1271405:-1:exon
so has part: feature:1267419-1267581:-1:exon
so has part: feature:1264869-1265014:-1:exon

GI:59958358
type: GI
SIO_000068: ncbigi

position:1281527:-1
position: 1281527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1281449-1281527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1275326-1275492:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1271272-1271405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1267419-1267581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1264869-1265014:-1:exon

CRLF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
inference: similar to AA sequence (same species):RefSeq:NP_071431.2
exception: annotated by transcript or proteomic data
note: isoform 1 precursor is encoded by transcript variant 1; The RefSeq protein has 4 substitutions and 2 indels and aligns at 70% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: cytokine receptor-like factor 2 isoform 1 precursor
translation: MGRLVLLWGAAVFLLGGWMALGQGGAAEGVQIQIIYFNLETVQVTWNASKYSRTNLTFHYRFNGDEAYDQCTNYLLQEGHTSGCLLDAEQRDDILYFSIRNGTHPVFTASRWMVYYLKPSSPKHVRFSWHQDAVTVTCSDLSYGDLLYEVQYRSPFDTEWQSKQENTCNVTIEGLDAEKCYSFWVRVKAMEDVYGPDTYPSDWSEVTCWQRGEIRDACAETPTPPKPKLSKFILISSLAILLMVSLLLLSLWKLWRVKKFLIPSVPDPKSIFPGLFEIHQGNFQEWITDTQNVAHLHKMAGAEQESGPEEPLVVQLAKTEAESPRMLDPQTEEKEASGGSLQLPHQPLQGGDVVTIGGFTFVMNDRSYVAL
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(join(<1264869..1265014,1267419..1267581,1271272..1271405,1275326..1275492,1277699..1277801,1281449..1281527))
location: region:1264869-1281527:-1
so has part: feature:1281449-1281527:-1:exon
so has part: feature:1277699-1277801:-1:exon
so has part: feature:1275326-1275492:-1:exon
so has part: feature:1271272-1271405:-1:exon
so has part: feature:1267419-1267581:-1:exon
so has part: feature:1264869-1265014:-1:exon

NP_071431.2
type: Protein
SIO_000068: ncbiprotein

GI:19923096
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1281449-1281527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1277699-1277801:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1275326-1275492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1271272-1271405:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1267419-1267581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264869-1265014:-1:exon

CRLF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
inference: similar to AA sequence (same species):RefSeq:NP_001012288.1
exception: annotated by transcript or proteomic data
note: isoform 2 is encoded by transcript variant 2; The RefSeq protein has 3 substitutions and 2 indels and aligns at 58% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: cytokine receptor-like factor 2 isoform 2
translation: MVYYLKPSSPKHVRFSWHQDAVTVTCSDLSYGDLLYEVQYRSPFDTEWQSKQENTCNVTIEGLDAEKCYSFWVRVKAMEDVYGPDTYPSDWSEVTCWQRGEIRDACAETPTPPKPKLSKFILISSLAILLMVSLLLLSLWKLWRVRKFLIPSVPDPKSIFPGLFEIHQGNFQEWITDTQNVAHLHKMAGAEQGSGPEEPLVVQLAKTEAESPRMLDPQTEEKEASGGSLQLPHQPLQGGDVVTIGDFTFVMNDRSYVAL
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(join(<1264869..1265014,1267419..1267581,1271272..1271405,1275326..1275338))
location: region:1264869-1275338:-1
so has part: feature:1275326-1275338:-1:exon
so has part: feature:1271272-1271405:-1:exon
so has part: feature:1267419-1267581:-1:exon
so has part: feature:1264869-1265014:-1:exon

NP_001012288.1
type: Protein
SIO_000068: ncbiprotein

GI:59958359
type: GI
SIO_000068: ncbigi

position:1275338:-1
position: 1275338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1275326-1275338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1271272-1271405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267419-1267581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1264869-1265014:-1:exon

CSF2RA
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
note: colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage); Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 1337693..>1378828
location: region:1337693-1378828:1
so has part: feature:1337693-1378828:1:exon
subclass of: SO_0000010

1438
type: Gene
SIO_000068: ncbigene

2435
type: HGNC
SIO_000068: hgnc

02381
type: HPRD
SIO_000068: hprd

306250
type: OMIM
SIO_000068: omim

position:1337693:1
position: 1337693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378828:1
position: 1378828
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337693-1378828:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
product: colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage), transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_006140.4
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1337693..1337772,1343648..1343735,1351571..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1369384..1369519,1372816..1372912,1374339..1374420,1378295..1378828)
location: region:1337693-1378828:1
so has part: feature:1337693-1337772:1:exon
so has part: feature:1343648-1343735:1:exon
so has part: feature:1351571-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1369384-1369519:1:exon
so has part: feature:1372816-1372912:1:exon
so has part: feature:1374339-1374420:1:exon
so has part: feature:1378295-1378828:1:exon

GI:238908509
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1337693-1337772:1:exon

position:1337772:1
position: 1337772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1343648-1343735:1:exon

position:1343648:1
position: 1343648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343735:1
position: 1343735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1351571-1351672:1:exon

position:1351571:1
position: 1351571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1351672:1
position: 1351672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1354671-1354813:1:exon

position:1354671:1
position: 1354671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1354813:1
position: 1354813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1357412-1357535:1:exon

position:1357412:1
position: 1357412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357535:1
position: 1357535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1357652-1357781:1:exon

position:1357652:1
position: 1357652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357781:1
position: 1357781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1359230-1359402:1:exon

position:1359230:1
position: 1359230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359402:1
position: 1359402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1363221-1363354:1:exon

position:1363221:1
position: 1363221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1363354:1
position: 1363354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1364320-1364349:1:exon

position:1364320:1
position: 1364320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1364349:1
position: 1364349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1369384-1369519:1:exon

position:1369384:1
position: 1369384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1369519:1
position: 1369519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1372816-1372912:1:exon

position:1372816:1
position: 1372816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1372912:1
position: 1372912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1374339-1374420:1:exon

position:1374339:1
position: 1374339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1374420:1
position: 1374420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1378295-1378828:1:exon

position:1378295:1
position: 1378295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
product: colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage), transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_172246.2
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1337693..1337772,1343648..1343735,1351571..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1369384..1369519,1378295..1378828)
location: region:1337693-1378828:1
so has part: feature:1337693-1337772:1:exon
so has part: feature:1343648-1343735:1:exon
so has part: feature:1351571-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1369384-1369519:1:exon
so has part: feature:1378295-1378828:1:exon

GI:238908511
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1337693-1337772:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1343648-1343735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1351571-1351672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1354671-1354813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1363221-1363354:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1364320-1364349:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1369384-1369519:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1378295-1378828:1:exon

CSF2RA
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
product: colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage), transcript variant 11
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_027760.1
SIO_010081: CSF2RA
so part of: CSF2RA
location: join(1337693..1337772,1343648..1343735,1351571..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1372816..1372912,1374339..1374420,1378295..>1378828)
location: region:1337693-1378828:1
so has part: feature:1337693-1337772:1:exon
so has part: feature:1343648-1343735:1:exon
so has part: feature:1351571-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1372816-1372912:1:exon
so has part: feature:1374339-1374420:1:exon
so has part: feature:1378295-1378828:1:exon

GI:238908522
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1337693-1337772:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1343648-1343735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1351571-1351672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1354671-1354813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1363221-1363354:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1364320-1364349:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1372816-1372912:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1374339-1374420:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1378295-1378828:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
product: colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage), transcript variant 6
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_172249.2
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1337693..1337772,1343648..1343735,1351571..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1374339..1374420,1378295..1378828)
location: region:1337693-1378828:1
so has part: feature:1337693-1337772:1:exon
so has part: feature:1343648-1343735:1:exon
so has part: feature:1351571-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1374339-1374420:1:exon
so has part: feature:1378295-1378828:1:exon

GI:238908513
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1337693-1337772:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1343648-1343735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1351571-1351672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1354671-1354813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1374339-1374420:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1378295-1378828:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
product: colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage), transcript variant 7
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001161529.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1337693..1337772,1343648..1343711,1351302..1351453,1351571..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1369384..1369519,1372816..1372912,1374339..1374420,1378295..1378828)
location: region:1337693-1378828:1
so has part: feature:1337693-1337772:1:exon
so has part: feature:1343648-1343711:1:exon
so has part: feature:1351302-1351453:1:exon
so has part: feature:1351571-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1369384-1369519:1:exon
so has part: feature:1372816-1372912:1:exon
so has part: feature:1374339-1374420:1:exon
so has part: feature:1378295-1378828:1:exon

GI:238908514
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1337693-1337772:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1343648-1343711:1:exon

position:1343711:1
position: 1343711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1351302-1351453:1:exon

position:1351302:1
position: 1351302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1351453:1
position: 1351453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1351571-1351672:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1354671-1354813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1363221-1363354:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1364320-1364349:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1369384-1369519:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1372816-1372912:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1374339-1374420:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1378295-1378828:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
product: colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage), transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_172245.2
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1337693..1337772,1343648..1343711,1351571..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1369384..1369519,1372816..1372912,1374339..1374420,1378295..1378828)
location: region:1337693-1378828:1
so has part: feature:1337693-1337772:1:exon
so has part: feature:1343648-1343711:1:exon
so has part: feature:1351571-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1369384-1369519:1:exon
so has part: feature:1372816-1372912:1:exon
so has part: feature:1374339-1374420:1:exon
so has part: feature:1378295-1378828:1:exon

GI:238908510
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1337693-1337772:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1343648-1343711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1351571-1351672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1354671-1354813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1363221-1363354:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1364320-1364349:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1369384-1369519:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1372816-1372912:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1374339-1374420:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1378295-1378828:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
product: colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage), transcript variant 10
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001161532.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1337693..1337772,1351571..1351672,1357412..1357535,1357652..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1369384..1369519,1372816..1372912,1374339..1374420,1378295..1378828)
location: region:1337693-1378828:1
so has part: feature:1337693-1337772:1:exon
so has part: feature:1351571-1351672:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1369384-1369519:1:exon
so has part: feature:1372816-1372912:1:exon
so has part: feature:1374339-1374420:1:exon
so has part: feature:1378295-1378828:1:exon

GI:238908520
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1337693-1337772:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1351571-1351672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363221-1363354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1364320-1364349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369384-1369519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1372816-1372912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1374339-1374420:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1378295-1378828:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
product: colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage), transcript variant 9
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001161531.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1337693..1337772,1343648..1343735,1351571..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1369384..1369519,1372816..1372912,1374339..1374420,1374521..1374711)
location: region:1337693-1374711:1
so has part: feature:1337693-1337772:1:exon
so has part: feature:1343648-1343735:1:exon
so has part: feature:1351571-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1369384-1369519:1:exon
so has part: feature:1372816-1372912:1:exon
so has part: feature:1374339-1374420:1:exon
so has part: feature:1374521-1374711:1:exon

GI:238908518
type: GI
SIO_000068: ncbigi

position:1374711:1
position: 1374711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337693-1337772:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1343648-1343735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1351571-1351672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1354671-1354813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1363221-1363354:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1364320-1364349:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1369384-1369519:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1372816-1372912:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1374339-1374420:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1374521-1374711:1:exon

position:1374521:1
position: 1374521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
product: colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage), transcript variant 8
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001161530.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1351571..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1369384..1369519,1372154..1372255,1372816..1372912,1374339..1374420,1378295..1378828)
location: region:1351571-1378828:1
so has part: feature:1351571-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1369384-1369519:1:exon
so has part: feature:1372154-1372255:1:exon
so has part: feature:1372816-1372912:1:exon
so has part: feature:1374339-1374420:1:exon
so has part: feature:1378295-1378828:1:exon

GI:238908516
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1351571-1351672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1354671-1354813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363221-1363354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1364320-1364349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369384-1369519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1372154-1372255:1:exon

position:1372154:1
position: 1372154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1372255:1
position: 1372255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1372816-1372912:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1374339-1374420:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1378295-1378828:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
product: colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage), transcript variant 4
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_172247.2
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1351571..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1369384..1369519,1374339..1374420,1378295..1378828)
location: region:1351571-1378828:1
so has part: feature:1351571-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1369384-1369519:1:exon
so has part: feature:1374339-1374420:1:exon
so has part: feature:1378295-1378828:1:exon

GI:238908512
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1351571-1351672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1354671-1354813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363221-1363354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1364320-1364349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369384-1369519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1374339-1374420:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1378295-1378828:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
note: isoform b precursor is encoded by transcript variant 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform b precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFDHLGGIHPRGRERLPRRGLDREGNYLRPRGCRNGMDISASATRGNCFLDDAVNLYIIFYVFI
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1351597..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1369384..1369519,1378295..1378482)
location: region:1351597-1378482:1
so has part: feature:1351597-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1369384-1369519:1:exon
so has part: feature:1378295-1378482:1:exon

NP_758449.1
type: Protein
SIO_000068: ncbiprotein

GI:27437034
type: GI
SIO_000068: ncbigi

CCDS35190.1
type: CCDS
SIO_000068: ccds

position:1351597:1
position: 1351597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378482:1
position: 1378482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1351597-1351672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1354671-1354813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363221-1363354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1364320-1364349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369384-1369519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1378295-1378482:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
note: isoform f precursor is encoded by transcript variant 8; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform f precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSHSVTQAGVQWHNLGSLQPPSPRLKRFSCLRLPGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1351597..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1369384..1369519,1372154..1372255,1372816..1372912,1374339..1374420,1378295..1378372)
location: region:1351597-1378372:1
so has part: feature:1351597-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1369384-1369519:1:exon
so has part: feature:1372154-1372255:1:exon
so has part: feature:1372816-1372912:1:exon
so has part: feature:1374339-1374420:1:exon
so has part: feature:1378295-1378372:1:exon

NP_001155002.1
type: Protein
SIO_000068: ncbiprotein

GI:238908517
type: GI
SIO_000068: ncbigi

CCDS55359.1
type: CCDS
SIO_000068: ccds

position:1378372:1
position: 1378372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1351597-1351672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1354671-1354813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363221-1363354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1364320-1364349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369384-1369519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1372154-1372255:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1372816-1372912:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1374339-1374420:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1378295-1378372:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
note: isoform a precursor is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform a precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1351597..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1369384..1369519,1372816..1372912,1374339..1374420,1378295..1378372)
location: region:1351597-1378372:1
so has part: feature:1351597-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1369384-1369519:1:exon
so has part: feature:1372816-1372912:1:exon
so has part: feature:1374339-1374420:1:exon
so has part: feature:1378295-1378372:1:exon

NP_006131.2
type: Protein
SIO_000068: ncbiprotein

GI:20070195
type: GI
SIO_000068: ncbigi

CCDS35191.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:1351597-1351672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1354671-1354813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363221-1363354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1364320-1364349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369384-1369519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1372816-1372912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1374339-1374420:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1378295-1378372:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
note: isoform a precursor is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform a precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1351597..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1369384..1369519,1372816..1372912,1374339..1374420,1378295..1378372)
location: region:1351597-1378372:1
so has part: feature:1351597-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1369384-1369519:1:exon
so has part: feature:1372816-1372912:1:exon
so has part: feature:1374339-1374420:1:exon
so has part: feature:1378295-1378372:1:exon

NP_758448.1
type: Protein
SIO_000068: ncbiprotein

GI:27437032
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1351597-1351672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1354671-1354813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363221-1363354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1364320-1364349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369384-1369519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1372816-1372912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1374339-1374420:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1378295-1378372:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
note: isoform a precursor is encoded by transcript variant 7; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform a precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1351597..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1369384..1369519,1372816..1372912,1374339..1374420,1378295..1378372)
location: region:1351597-1378372:1
so has part: feature:1351597-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1369384-1369519:1:exon
so has part: feature:1372816-1372912:1:exon
so has part: feature:1374339-1374420:1:exon
so has part: feature:1378295-1378372:1:exon

NP_001155001.1
type: Protein
SIO_000068: ncbiprotein

GI:238908515
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1351597-1351672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1354671-1354813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363221-1363354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1364320-1364349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369384-1369519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1372816-1372912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1374339-1374420:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1378295-1378372:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
note: isoform g precursor is encoded by transcript variant 9; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform g precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEMGPQRHHRCGWNLYPTPGPSPGSGSSPRLGSESSL
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1351597..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1369384..1369519,1372816..1372912,1374339..1374420,1374521..1374628)
location: region:1351597-1374628:1
so has part: feature:1351597-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1369384-1369519:1:exon
so has part: feature:1372816-1372912:1:exon
so has part: feature:1374339-1374420:1:exon
so has part: feature:1374521-1374628:1:exon

NP_001155003.1
type: Protein
SIO_000068: ncbiprotein

GI:238908519
type: GI
SIO_000068: ncbigi

CCDS55360.1
type: CCDS
SIO_000068: ccds

position:1374628:1
position: 1374628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1351597-1351672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1354671-1354813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363221-1363354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1364320-1364349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369384-1369519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1372816-1372912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1374339-1374420:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1374521-1374628:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
note: isoform c precursor is encoded by transcript variant 4; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform c precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSLGYSGCSRQFHRSKTN
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1351597..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1369384..1369519,1374339..1374394)
location: region:1351597-1374394:1
so has part: feature:1351597-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1369384-1369519:1:exon
so has part: feature:1374339-1374394:1:exon

NP_758450.1
type: Protein
SIO_000068: ncbiprotein

GI:27437036
type: GI
SIO_000068: ncbigi

CCDS35192.1
type: CCDS
SIO_000068: ccds

position:1374394:1
position: 1374394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1351597-1351672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1354671-1354813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363221-1363354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1364320-1364349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369384-1369519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1374339-1374394:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
note: isoform e precursor is encoded by transcript variant 6; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform e precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIGSLGYSGCSRQFHRSKTN
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1351597..1351672,1354671..1354813,1357412..1357535,1357652..1357781,1359230..1359402,1374339..1374394)
location: region:1351597-1374394:1
so has part: feature:1351597-1351672:1:exon
so has part: feature:1354671-1354813:1:exon
so has part: feature:1357412-1357535:1:exon
so has part: feature:1357652-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1374339-1374394:1:exon

NP_758452.1
type: Protein
SIO_000068: ncbiprotein

GI:27437040
type: GI
SIO_000068: ncbigi

CCDS35193.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:1351597-1351672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1354671-1354813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357412-1357535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357652-1357781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1374339-1374394:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMR
alternative label: SMDP4
gene: CSF2RA
gene synonym: CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMR; SMDP4
note: isoform h is encoded by transcript variant 10; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform h
translation: MNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1357708..1357781,1359230..1359402,1363221..1363354,1364320..1364349,1369384..1369519,1372816..1372912,1374339..1374420,1378295..1378372)
location: region:1357708-1378372:1
so has part: feature:1357708-1357781:1:exon
so has part: feature:1359230-1359402:1:exon
so has part: feature:1363221-1363354:1:exon
so has part: feature:1364320-1364349:1:exon
so has part: feature:1369384-1369519:1:exon
so has part: feature:1372816-1372912:1:exon
so has part: feature:1374339-1374420:1:exon
so has part: feature:1378295-1378372:1:exon

NP_001155004.1
type: Protein
SIO_000068: ncbiprotein

GI:238908521
type: GI
SIO_000068: ncbigi

CCDS55361.1
type: CCDS
SIO_000068: ccds

position:1357708:1
position: 1357708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1357708-1357781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1359230-1359402:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1363221-1363354:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1364320-1364349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1369384-1369519:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1372816-1372912:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1374339-1374420:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1378295-1378372:1:exon

MIR3690
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: MIR3690
note: microRNA 3690; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 1362811..1362885
location: region:1362811-1362885:1
so has part: feature:1362811-1362885:1:exon
subclass of: SO_0000571

100500894
type: Gene
SIO_000068: ncbigene

38967
type: HGNC
SIO_000068: hgnc

MI0016091
type: miRBase
SIO_000068: mirbase

position:1362811:1
position: 1362811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362885:1
position: 1362885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1362811-1362885:1:exon

MIR3690
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 9606
gene: MIR3690
product: microRNA 3690
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_037461.1
SIO_010081: MIR3690
subclass of: SO_0000673
so part of: MIR3690
location: 1362811..1362885
location: region:1362811-1362885:1
so has part: feature:1362811-1362885:1:exon

GI:312147059
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1362811-1362885:1:exon

MIR3690
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
gene: MIR3690
nc RNA class: miRNA
product: hsa-miR-3690
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR3690
subclass of: SO_0000673
so part of: MIR3690
location: 1362820..1362842
location: region:1362820-1362842:1
so has part: feature:1362820-1362842:1:exon

MIMAT0018119
type: miRBase
SIO_000068: mirbase

position:1362820:1
position: 1362820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362842:1
position: 1362842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1362820-1362842:1:exon

IL3RA
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: interleukin 3 receptor, alpha (low affinity); Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 1405488..1451582
location: region:1405488-1451582:1
so has part: feature:1405488-1451582:1:exon
subclass of: SO_0000010

3563
type: Gene
SIO_000068: ncbigene

6012
type: HGNC
SIO_000068: hgnc

02392
type: HPRD
SIO_000068: hprd

08951
type: HPRD
SIO_000068: hprd

308385
type: OMIM
SIO_000068: omim

position:1405488:1
position: 1405488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451582:1
position: 1451582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1405488-1451582:1:exon

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
product: interleukin 3 receptor, alpha (low affinity), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 2 Proteins, and 100% coverage by RNAseq alignments, including 5 samples with support for all introns
transcript id: XM_005274780.1
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1405488..1405819,1410624..1410722,1414209..1414327,1417324..1417438,1420993..1421125,1421215..1421399,1425114..1425229,1427754..1427780,1434031..1434145,1447552..1447657,1449916..1449997,1451284..1451582)
location: region:1405488-1451582:1
so has part: feature:1405488-1405819:1:exon
so has part: feature:1410624-1410722:1:exon
so has part: feature:1414209-1414327:1:exon
so has part: feature:1417324-1417438:1:exon
so has part: feature:1420993-1421125:1:exon
so has part: feature:1421215-1421399:1:exon
so has part: feature:1425114-1425229:1:exon
so has part: feature:1427754-1427780:1:exon
so has part: feature:1434031-1434145:1:exon
so has part: feature:1447552-1447657:1:exon
so has part: feature:1449916-1449997:1:exon
so has part: feature:1451284-1451582:1:exon

GI:530423006
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1405488-1405819:1:exon

position:1405819:1
position: 1405819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1410624-1410722:1:exon

position:1410624:1
position: 1410624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1410722:1
position: 1410722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1414209-1414327:1:exon

position:1414209:1
position: 1414209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414327:1
position: 1414327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1417324-1417438:1:exon

position:1417324:1
position: 1417324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1417438:1
position: 1417438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1420993-1421125:1:exon

position:1420993:1
position: 1420993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1421125:1
position: 1421125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1421215-1421399:1:exon

position:1421215:1
position: 1421215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1421399:1
position: 1421399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1425114-1425229:1:exon

position:1425114:1
position: 1425114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425229:1
position: 1425229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1427754-1427780:1:exon

position:1427754:1
position: 1427754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427780:1
position: 1427780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1434031-1434145:1:exon

position:1434031:1
position: 1434031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434145:1
position: 1434145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1447552-1447657:1:exon

position:1447552:1
position: 1447552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447657:1
position: 1447657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1449916-1449997:1:exon

position:1449916:1
position: 1449916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1449997:1
position: 1449997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1451284-1451582:1:exon

position:1451284:1
position: 1451284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
product: interleukin 3 receptor, alpha (low affinity), transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_002183.3
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1405509..1405819,1410621..1410722,1414209..1414327,1417324..1417438,1420993..1421125,1421215..1421399,1425114..1425229,1427754..1427780,1434031..1434145,1447552..1447657,1449916..1449997,1451284..1451582)
location: region:1405509-1451582:1
so has part: feature:1405509-1405819:1:exon
so has part: feature:1410621-1410722:1:exon
so has part: feature:1414209-1414327:1:exon
so has part: feature:1417324-1417438:1:exon
so has part: feature:1420993-1421125:1:exon
so has part: feature:1421215-1421399:1:exon
so has part: feature:1425114-1425229:1:exon
so has part: feature:1427754-1427780:1:exon
so has part: feature:1434031-1434145:1:exon
so has part: feature:1447552-1447657:1:exon
so has part: feature:1449916-1449997:1:exon
so has part: feature:1451284-1451582:1:exon

GI:391224438
type: GI
SIO_000068: ncbigi

position:1405509:1
position: 1405509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1405509-1405819:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1410621-1410722:1:exon

position:1410621:1
position: 1410621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1414209-1414327:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1417324-1417438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1420993-1421125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1421215-1421399:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1425114-1425229:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1427754-1427780:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1434031-1434145:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1447552-1447657:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1449916-1449997:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1451284-1451582:1:exon

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
product: interleukin 3 receptor, alpha (low affinity), transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001267713.1
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1405509..1405819,1410621..1410722,1420993..1421125,1421215..1421399,1425114..1425229,1427754..1427780,1434031..1434145,1447552..1447657,1449916..1449997,1451284..1451582)
location: region:1405509-1451582:1
so has part: feature:1405509-1405819:1:exon
so has part: feature:1410621-1410722:1:exon
so has part: feature:1420993-1421125:1:exon
so has part: feature:1421215-1421399:1:exon
so has part: feature:1425114-1425229:1:exon
so has part: feature:1427754-1427780:1:exon
so has part: feature:1434031-1434145:1:exon
so has part: feature:1447552-1447657:1:exon
so has part: feature:1449916-1449997:1:exon
so has part: feature:1451284-1451582:1:exon

GI:391224439
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1405509-1405819:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1410621-1410722:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1420993-1421125:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1421215-1421399:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1425114-1425229:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1427754-1427780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1434031-1434145:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1447552-1447657:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1449916-1449997:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1451284-1451582:1:exon

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
product: interleukin 3 receptor, alpha (low affinity), transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, and 100% coverage by RNAseq alignments, including 4 samples with support for all introns
transcript id: XM_005274781.1
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1405679..1405819,1410621..1410722,1414209..1414327,1417324..1417438,1420993..1421125,1421218..1421399,1425114..1425229,1427754..1427780,1434031..1434145,1447552..1447657,1449916..1449997,1451284..1451582)
location: region:1405679-1451582:1
so has part: feature:1405679-1405819:1:exon
so has part: feature:1410621-1410722:1:exon
so has part: feature:1414209-1414327:1:exon
so has part: feature:1417324-1417438:1:exon
so has part: feature:1420993-1421125:1:exon
so has part: feature:1421218-1421399:1:exon
so has part: feature:1425114-1425229:1:exon
so has part: feature:1427754-1427780:1:exon
so has part: feature:1434031-1434145:1:exon
so has part: feature:1447552-1447657:1:exon
so has part: feature:1449916-1449997:1:exon
so has part: feature:1451284-1451582:1:exon

GI:530423008
type: GI
SIO_000068: ncbigi

position:1405679:1
position: 1405679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1405679-1405819:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1410621-1410722:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1414209-1414327:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1417324-1417438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1420993-1421125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1421218-1421399:1:exon

position:1421218:1
position: 1421218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1425114-1425229:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1427754-1427780:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1434031-1434145:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1447552-1447657:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1449916-1449997:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1451284-1451582:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: isoform 1 precursor is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform 1 precursor
translation: MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSMPAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFLSCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSSHILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYELQIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGANTRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAGKAGLEECLVTEVQVVQKT
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1410659..1410722,1414209..1414327,1417324..1417438,1420993..1421125,1421215..1421399,1425114..1425229,1427754..1427780,1434031..1434145,1447552..1447657,1449916..1449997,1451284..1451358)
location: region:1410659-1451358:1
so has part: feature:1410659-1410722:1:exon
so has part: feature:1414209-1414327:1:exon
so has part: feature:1417324-1417438:1:exon
so has part: feature:1420993-1421125:1:exon
so has part: feature:1421215-1421399:1:exon
so has part: feature:1425114-1425229:1:exon
so has part: feature:1427754-1427780:1:exon
so has part: feature:1434031-1434145:1:exon
so has part: feature:1447552-1447657:1:exon
so has part: feature:1449916-1449997:1:exon
so has part: feature:1451284-1451358:1:exon

NP_002174.1
type: Protein
SIO_000068: ncbiprotein

GI:13324710
type: GI
SIO_000068: ncbigi

CCDS14113.1
type: CCDS
SIO_000068: ccds

position:1410659:1
position: 1410659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451358:1
position: 1451358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1410659-1410722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1414209-1414327:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1417324-1417438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1420993-1421125:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1421215-1421399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1425114-1425229:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427754-1427780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1434031-1434145:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1447552-1447657:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1449916-1449997:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1451284-1451358:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform X3
translation: MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSMPAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFLSCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSSHILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYELQIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGANTRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAGKAGLEECLVTEVQVVQKT
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1410659..1410722,1414209..1414327,1417324..1417438,1420993..1421125,1421215..1421399,1425114..1425229,1427754..1427780,1434031..1434145,1447552..1447657,1449916..1449997,1451284..1451358)
location: region:1410659-1451358:1
so has part: feature:1410659-1410722:1:exon
so has part: feature:1414209-1414327:1:exon
so has part: feature:1417324-1417438:1:exon
so has part: feature:1420993-1421125:1:exon
so has part: feature:1421215-1421399:1:exon
so has part: feature:1425114-1425229:1:exon
so has part: feature:1427754-1427780:1:exon
so has part: feature:1434031-1434145:1:exon
so has part: feature:1447552-1447657:1:exon
so has part: feature:1449916-1449997:1:exon
so has part: feature:1451284-1451358:1:exon

XP_005274837.1
type: Protein
SIO_000068: ncbiprotein

GI:530423007
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1410659-1410722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1414209-1414327:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1417324-1417438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1420993-1421125:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1421215-1421399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1425114-1425229:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427754-1427780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1434031-1434145:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1447552-1447657:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1449916-1449997:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1451284-1451358:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform X4
translation: MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSMPAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFLSCSWAVGPGAPADVQYDLYLNVAKRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSSHILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYELQIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGANTRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAGKAGLEECLVTEVQVVQKT
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1410659..1410722,1414209..1414327,1417324..1417438,1420993..1421125,1421218..1421399,1425114..1425229,1427754..1427780,1434031..1434145,1447552..1447657,1449916..1449997,1451284..1451358)
location: region:1410659-1451358:1
so has part: feature:1410659-1410722:1:exon
so has part: feature:1414209-1414327:1:exon
so has part: feature:1417324-1417438:1:exon
so has part: feature:1420993-1421125:1:exon
so has part: feature:1421218-1421399:1:exon
so has part: feature:1425114-1425229:1:exon
so has part: feature:1427754-1427780:1:exon
so has part: feature:1434031-1434145:1:exon
so has part: feature:1447552-1447657:1:exon
so has part: feature:1449916-1449997:1:exon
so has part: feature:1451284-1451358:1:exon

XP_005274838.1
type: Protein
SIO_000068: ncbiprotein

GI:530423009
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1410659-1410722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1414209-1414327:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1417324-1417438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1420993-1421125:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1421218-1421399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1425114-1425229:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427754-1427780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1434031-1434145:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1447552-1447657:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1449916-1449997:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1451284-1451358:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: isoform 2 precursor is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform 2 precursor
translation: MVLLWLTLLLIALPCLLQTKEGGKPWAGAENLTCWIHDVDFLSCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSSHILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYELQIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGANTRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAGKAGLEECLVTEVQVVQKT
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1410659..1410722,1420993..1421125,1421215..1421399,1425114..1425229,1427754..1427780,1434031..1434145,1447552..1447657,1449916..1449997,1451284..1451358)
location: region:1410659-1451358:1
so has part: feature:1410659-1410722:1:exon
so has part: feature:1420993-1421125:1:exon
so has part: feature:1421215-1421399:1:exon
so has part: feature:1425114-1425229:1:exon
so has part: feature:1427754-1427780:1:exon
so has part: feature:1434031-1434145:1:exon
so has part: feature:1447552-1447657:1:exon
so has part: feature:1449916-1449997:1:exon
so has part: feature:1451284-1451358:1:exon

NP_001254642.1
type: Protein
SIO_000068: ncbiprotein

GI:391224440
type: GI
SIO_000068: ncbigi

CCDS59158.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:1410659-1410722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1420993-1421125:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1421215-1421399:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1425114-1425229:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1427754-1427780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1434031-1434145:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1447552-1447657:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1449916-1449997:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1451284-1451358:1:exon

LOC101928055
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC101928055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1421594..1451343)
location: region:1421594-1451343:-1
so has part: feature:1421594-1451343:-1:exon

101928055
type: Gene
SIO_000068: ncbigene

position:1421594:-1
position: 1421594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1451343:-1
position: 1451343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1421594-1451343:-1:exon

LOC101928055
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC101928055
product: uncharacterized LOC101928055, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage by RNAseq alignments, including 1 sample with support for all introns
transcript id: XR_247323.1
SIO_010081: LOC101928055
so part of: LOC101928055
location: complement(join(1421594..1421611,1424465..1425033,1447215..1447369,1447586..1447705,1451261..1451343))
location: region:1421594-1451343:-1
so has part: feature:1451261-1451343:-1:exon
so has part: feature:1447586-1447705:-1:exon
so has part: feature:1447215-1447369:-1:exon
so has part: feature:1424465-1425033:-1:exon
so has part: feature:1421594-1421611:-1:exon

GI:530423016
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1451261-1451343:-1:exon

position:1451261:-1
position: 1451261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1447586-1447705:-1:exon

position:1447586:-1
position: 1447586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1447705:-1
position: 1447705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1447215-1447369:-1:exon

position:1447215:-1
position: 1447215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1447369:-1
position: 1447369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1424465-1425033:-1:exon

position:1424465:-1
position: 1424465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1425033:-1
position: 1425033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1421594-1421611:-1:exon

position:1421611:-1
position: 1421611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101928055
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC101928055
product: uncharacterized LOC101928055, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage by RNAseq alignments, including 1 sample with support for all introns
transcript id: XR_247324.1
SIO_010081: LOC101928055
so part of: LOC101928055
location: complement(join(1421594..1421611,1424465..1425033,1447215..1447537))
location: region:1421594-1447537:-1
so has part: feature:1447215-1447537:-1:exon
so has part: feature:1424465-1425033:-1:exon
so has part: feature:1421594-1421611:-1:exon

GI:530423017
type: GI
SIO_000068: ncbigi

position:1447537:-1
position: 1447537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1447215-1447537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1424465-1425033:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1421594-1421611:-1:exon

LOC101928055
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC101928055
product: uncharacterized LOC101928055, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage by RNAseq alignments, including 2 samples with support for all introns
transcript id: XR_247326.1
SIO_010081: LOC101928055
so part of: LOC101928055
location: complement(join(1421594..1421611,1424465..1425033,1436849..1436911))
location: region:1421594-1436911:-1
so has part: feature:1436849-1436911:-1:exon
so has part: feature:1424465-1425033:-1:exon
so has part: feature:1421594-1421611:-1:exon

GI:530423019
type: GI
SIO_000068: ncbigi

position:1436911:-1
position: 1436911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1436849-1436911:-1:exon

position:1436849:-1
position: 1436849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1424465-1425033:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1421594-1421611:-1:exon

LOC101928055
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC101928055
product: uncharacterized LOC101928055, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage by RNAseq alignments, including 2 samples with support for all introns
transcript id: XR_247325.1
SIO_010081: LOC101928055
so part of: LOC101928055
location: complement(join(1421594..1421611,1424465..1425033,1433996..1434064))
location: region:1421594-1434064:-1
so has part: feature:1433996-1434064:-1:exon
so has part: feature:1424465-1425033:-1:exon
so has part: feature:1421594-1421611:-1:exon

GI:530423018
type: GI
SIO_000068: ncbigi

position:1434064:-1
position: 1434064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433996-1434064:-1:exon

position:1433996:-1
position: 1433996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1424465-1425033:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1421594-1421611:-1:exon

LOC101928055
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC101928055
product: uncharacterized LOC101928055, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage by RNAseq alignments, including 3 samples with support for all introns
transcript id: XR_247327.1
SIO_010081: LOC101928055
so part of: LOC101928055
location: complement(join(1421594..1421611,1424465..1425033,1430264..1430282))
location: region:1421594-1430282:-1
so has part: feature:1430264-1430282:-1:exon
so has part: feature:1424465-1425033:-1:exon
so has part: feature:1421594-1421611:-1:exon

GI:530423020
type: GI
SIO_000068: ncbigi

position:1430282:-1
position: 1430282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1430264-1430282:-1:exon

position:1430264:-1
position: 1430264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1424465-1425033:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1421594-1421611:-1:exon

SLC25A6
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: 2
alternative label: 3
alternative label: AAC3
alternative label: ANT
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: 2; 3; AAC3; ANT; ANT3; ANT3Y
note: solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(1455045..1461039)
location: region:1455045-1461039:-1
so has part: feature:1455045-1461039:-1:exon
subclass of: SO_0000010

293
type: Gene
SIO_000068: ncbigene

10992
type: HGNC
SIO_000068: hgnc

300151
type: OMIM
SIO_000068: omim

position:1455045:-1
position: 1455045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1461039:-1
position: 1461039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1455045-1461039:-1:exon

SLC25A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: 2
alternative label: 3
alternative label: AAC3
alternative label: ANT
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: 2; 3; AAC3; ANT; ANT3; ANT3Y
product: solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001636.3
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(join(1455045..1455652,1456172..1456312,1458134..1458620,1460792..1461039))
location: region:1455045-1461039:-1
so has part: feature:1460792-1461039:-1:exon
so has part: feature:1458134-1458620:-1:exon
so has part: feature:1456172-1456312:-1:exon
so has part: feature:1455045-1455652:-1:exon

GI:258547138
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1460792-1461039:-1:exon

position:1460792:-1
position: 1460792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1458134-1458620:-1:exon

position:1458134:-1
position: 1458134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1458620:-1
position: 1458620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1456172-1456312:-1:exon

position:1456172:-1
position: 1456172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1456312:-1
position: 1456312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1455045-1455652:-1:exon

position:1455652:-1
position: 1455652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC25A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: 2
alternative label: 3
alternative label: AAC3
alternative label: ANT
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: 2; 3; AAC3; ANT; ANT3; ANT3Y
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ADP/ATP translocase 3
translation: MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGTEREFRGLGDCLVKITKSDGIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(join(1455495..1455652,1456172..1456312,1458134..1458620,1460792..1460902))
location: region:1455495-1460902:-1
so has part: feature:1460792-1460902:-1:exon
so has part: feature:1458134-1458620:-1:exon
so has part: feature:1456172-1456312:-1:exon
so has part: feature:1455495-1455652:-1:exon

NP_001627.2
type: Protein
SIO_000068: ncbiprotein

GI:156071462
type: GI
SIO_000068: ncbigi

CCDS14114.1
type: CCDS
SIO_000068: ccds

position:1455495:-1
position: 1455495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1460902:-1
position: 1460902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1460792-1460902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1458134-1458620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1456172-1456312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1455495-1455652:-1:exon

ASMTL-AS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: ASMTL-AS
alternative label: ASMTLAS
alternative label: CXYorf2
alternative label: NCRNA00105
gene: ASMTL-AS1
gene synonym: ASMTL-AS; ASMTLAS; CXYorf2; NCRNA00105
note: ASMTL antisense RNA 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 1469424..1484314
location: region:1469424-1484314:1
so has part: feature:1469424-1484314:1:exon

80161
type: Gene
SIO_000068: ncbigene

25811
type: HGNC
SIO_000068: hgnc

position:1469424:1
position: 1469424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484314:1
position: 1484314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1469424-1484314:1:exon

ASMTL-AS1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: ASMTL-AS
alternative label: ASMTLAS
alternative label: CXYorf2
alternative label: NCRNA00105
gene: ASMTL-AS1
gene synonym: ASMTL-AS; ASMTLAS; CXYorf2; NCRNA00105
product: ASMTL antisense RNA 1, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_026711.1
SIO_010081: ASMTL-AS1
so part of: ASMTL-AS1
location: join(1469424..1469479,1470355..1471118,1472354..1472478,1481636..1481781,1482655..1483203,1483636..1484314)
location: region:1469424-1484314:1
so has part: feature:1469424-1469479:1:exon
so has part: feature:1470355-1471118:1:exon
so has part: feature:1472354-1472478:1:exon
so has part: feature:1481636-1481781:1:exon
so has part: feature:1482655-1483203:1:exon
so has part: feature:1483636-1484314:1:exon

GI:222418596
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1469424-1469479:1:exon

position:1469479:1
position: 1469479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1470355-1471118:1:exon

position:1470355:1
position: 1470355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471118:1
position: 1471118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1472354-1472478:1:exon

position:1472354:1
position: 1472354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472478:1
position: 1472478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1481636-1481781:1:exon

position:1481636:1
position: 1481636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1481781:1
position: 1481781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1482655-1483203:1:exon

position:1482655:1
position: 1482655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1483203:1
position: 1483203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1483636-1484314:1:exon

position:1483636:1
position: 1483636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ASMTL-AS1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: ASMTL-AS
alternative label: ASMTLAS
alternative label: CXYorf2
alternative label: NCRNA00105
gene: ASMTL-AS1
gene synonym: ASMTL-AS; ASMTLAS; CXYorf2; NCRNA00105
product: ASMTL antisense RNA 1, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_026710.1
SIO_010081: ASMTL-AS1
so part of: ASMTL-AS1
location: join(1469424..1469479,1470355..1471118,1472354..1472478,1481636..1482479)
location: region:1469424-1482479:1
so has part: feature:1469424-1469479:1:exon
so has part: feature:1470355-1471118:1:exon
so has part: feature:1472354-1472478:1:exon
so has part: feature:1481636-1482479:1:exon

GI:222418595
type: GI
SIO_000068: ncbigi

position:1482479:1
position: 1482479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1469424-1469479:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1470355-1471118:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1472354-1472478:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1481636-1482479:1:exon

ASMTL
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: acetylserotonin O-methyltransferase-like; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(1472032..1522687)
location: region:1472032-1522687:-1
so has part: feature:1472032-1522687:-1:exon
subclass of: SO_0000010

8623
type: Gene
SIO_000068: ncbigene

751
type: HGNC
SIO_000068: hgnc

300162
type: OMIM
SIO_000068: omim

position:1472032:-1
position: 1472032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1522687:-1
position: 1522687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1472032-1522687:-1:exon

ASMTL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
product: acetylserotonin O-methyltransferase-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 73 ESTs, 8 Proteins, and 97% coverage by RNAseq alignments, including 3 samples with support for all introns
transcript id: XM_005274783.1
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1472032..1472382,1481625..1481747,1486866..1487009,1487875..1488007,1490551..1490735,1494418..1494580,1496627..1497014,1501162..1501270,1503915..1503976,1504587..1504651,1507990..1508037,1511079..1511210,1521641..1521799,1522511..1522687))
location: region:1472032-1522687:-1
so has part: feature:1522511-1522687:-1:exon
so has part: feature:1521641-1521799:-1:exon
so has part: feature:1511079-1511210:-1:exon
so has part: feature:1507990-1508037:-1:exon
so has part: feature:1504587-1504651:-1:exon
so has part: feature:1503915-1503976:-1:exon
so has part: feature:1501162-1501270:-1:exon
so has part: feature:1496627-1497014:-1:exon
so has part: feature:1494418-1494580:-1:exon
so has part: feature:1490551-1490735:-1:exon
so has part: feature:1487875-1488007:-1:exon
so has part: feature:1486866-1487009:-1:exon
so has part: feature:1481625-1481747:-1:exon
so has part: feature:1472032-1472382:-1:exon

GI:530423012
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1522511-1522687:-1:exon

position:1522511:-1
position: 1522511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1521641-1521799:-1:exon

position:1521641:-1
position: 1521641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1521799:-1
position: 1521799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1511079-1511210:-1:exon

position:1511079:-1
position: 1511079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511210:-1
position: 1511210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1507990-1508037:-1:exon

position:1507990:-1
position: 1507990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1508037:-1
position: 1508037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1504587-1504651:-1:exon

position:1504587:-1
position: 1504587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1504651:-1
position: 1504651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1503915-1503976:-1:exon

position:1503915:-1
position: 1503915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1503976:-1
position: 1503976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1501162-1501270:-1:exon

position:1501162:-1
position: 1501162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1501270:-1
position: 1501270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1496627-1497014:-1:exon

position:1496627:-1
position: 1496627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497014:-1
position: 1497014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1494418-1494580:-1:exon

position:1494418:-1
position: 1494418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494580:-1
position: 1494580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1490551-1490735:-1:exon

position:1490551:-1
position: 1490551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1490735:-1
position: 1490735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1487875-1488007:-1:exon

position:1487875:-1
position: 1487875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1488007:-1
position: 1488007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1486866-1487009:-1:exon

position:1486866:-1
position: 1486866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1487009:-1
position: 1487009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1481625-1481747:-1:exon

position:1481625:-1
position: 1481625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1481747:-1
position: 1481747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1472032-1472382:-1:exon

position:1472382:-1
position: 1472382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASMTL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
product: acetylserotonin O-methyltransferase-like, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001173473.1
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1472032..1472382,1481625..1481747,1486866..1487009,1487875..1488007,1490551..1490735,1494418..1494580,1496627..1497014,1501162..1501270,1503915..1503976,1504587..1504651,1507990..1508037,1511079..1511210,1522511..1522655))
location: region:1472032-1522655:-1
so has part: feature:1522511-1522655:-1:exon
so has part: feature:1511079-1511210:-1:exon
so has part: feature:1507990-1508037:-1:exon
so has part: feature:1504587-1504651:-1:exon
so has part: feature:1503915-1503976:-1:exon
so has part: feature:1501162-1501270:-1:exon
so has part: feature:1496627-1497014:-1:exon
so has part: feature:1494418-1494580:-1:exon
so has part: feature:1490551-1490735:-1:exon
so has part: feature:1487875-1488007:-1:exon
so has part: feature:1486866-1487009:-1:exon
so has part: feature:1481625-1481747:-1:exon
so has part: feature:1472032-1472382:-1:exon

GI:291045180
type: GI
SIO_000068: ncbigi

position:1522655:-1
position: 1522655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1522511-1522655:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1511079-1511210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1507990-1508037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1504587-1504651:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1503915-1503976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1501162-1501270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1496627-1497014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1494418-1494580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1490551-1490735:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1487875-1488007:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1486866-1487009:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1481625-1481747:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1472032-1472382:-1:exon

ASMTL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
product: acetylserotonin O-methyltransferase-like, transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001173474.1
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1472032..1472382,1481625..1481747,1486866..1487009,1487875..1488007,1490551..1490735,1494418..1494580,1496627..1497014,1501162..1501270,1503915..1503976,1504587..1504651,1511079..1511210,1521641..1521870))
location: region:1472032-1521870:-1
so has part: feature:1521641-1521870:-1:exon
so has part: feature:1511079-1511210:-1:exon
so has part: feature:1504587-1504651:-1:exon
so has part: feature:1503915-1503976:-1:exon
so has part: feature:1501162-1501270:-1:exon
so has part: feature:1496627-1497014:-1:exon
so has part: feature:1494418-1494580:-1:exon
so has part: feature:1490551-1490735:-1:exon
so has part: feature:1487875-1488007:-1:exon
so has part: feature:1486866-1487009:-1:exon
so has part: feature:1481625-1481747:-1:exon
so has part: feature:1472032-1472382:-1:exon

GI:291045182
type: GI
SIO_000068: ncbigi

position:1521870:-1
position: 1521870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1521641-1521870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1511079-1511210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1504587-1504651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1503915-1503976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1501162-1501270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1496627-1497014:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1494418-1494580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1490551-1490735:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1487875-1488007:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1486866-1487009:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1481625-1481747:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1472032-1472382:-1:exon

ASMTL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
product: acetylserotonin O-methyltransferase-like, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_004192.3
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1472032..1472382,1481625..1481747,1486866..1487009,1487875..1488007,1490551..1490735,1494418..1494580,1496627..1497014,1501162..1501270,1503915..1503976,1504587..1504651,1507990..1508037,1511079..1511210,1521641..1521870))
location: region:1472032-1521870:-1
so has part: feature:1521641-1521870:-1:exon
so has part: feature:1511079-1511210:-1:exon
so has part: feature:1507990-1508037:-1:exon
so has part: feature:1504587-1504651:-1:exon
so has part: feature:1503915-1503976:-1:exon
so has part: feature:1501162-1501270:-1:exon
so has part: feature:1496627-1497014:-1:exon
so has part: feature:1494418-1494580:-1:exon
so has part: feature:1490551-1490735:-1:exon
so has part: feature:1487875-1488007:-1:exon
so has part: feature:1486866-1487009:-1:exon
so has part: feature:1481625-1481747:-1:exon
so has part: feature:1472032-1472382:-1:exon

GI:291045179
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1521641-1521870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1511079-1511210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1507990-1508037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1504587-1504651:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1503915-1503976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1501162-1501270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1496627-1497014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1494418-1494580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1490551-1490735:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1487875-1488007:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1486866-1487009:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1481625-1481747:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1472032-1472382:-1:exon

ASMTL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
product: acetylserotonin O-methyltransferase-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 53 ESTs, 1 Protein, and 97% coverage by RNAseq alignments
transcript id: XM_005274784.1
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1472032..1472382,1481625..1481747,1486866..1487009,1487875..1488007,1490551..1490735,1494418..1494580,1496627..1497014,1501162..1501270,1503915..1503976,1507990..1508037,1511079..1511210,1521641..1521837))
location: region:1472032-1521837:-1
so has part: feature:1521641-1521837:-1:exon
so has part: feature:1511079-1511210:-1:exon
so has part: feature:1507990-1508037:-1:exon
so has part: feature:1503915-1503976:-1:exon
so has part: feature:1501162-1501270:-1:exon
so has part: feature:1496627-1497014:-1:exon
so has part: feature:1494418-1494580:-1:exon
so has part: feature:1490551-1490735:-1:exon
so has part: feature:1487875-1488007:-1:exon
so has part: feature:1486866-1487009:-1:exon
so has part: feature:1481625-1481747:-1:exon
so has part: feature:1472032-1472382:-1:exon

GI:530423014
type: GI
SIO_000068: ncbigi

position:1521837:-1
position: 1521837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1521641-1521837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1511079-1511210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1507990-1508037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1503915-1503976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1501162-1501270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1496627-1497014:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1494418-1494580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1490551-1490735:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1487875-1488007:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1486866-1487009:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1481625-1481747:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1472032-1472382:-1:exon

ASMTL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: isoform 3 is encoded by transcript variant 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: N-acetylserotonin O-methyltransferase-like protein isoform 3
translation: MVLCPVIGKLLHKRVVLASASPRRQEILSNAGLRFEVVPSKFKEKLDKASFATPYGYAMETAKQKALEVANRLYQTVGGLILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHCSSKDHQLDTRVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHGDFLNVVGFPLNHFCKQLVKLYYPPRPEDLRRSVKHDSIPAADTFEDLSDVEGGGSEPTQRDAGSRDEKAEAGEAGQATAEAECHRTRETLPPFPTRLLELIEGFMLSKGLLTACKLKVFDLLKDEAPQKAADIASKVDASACGMERLLDICAAMGLLEKTEQGYSNTETANVYLASDGEYSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQDAYYQSPETRLRFMRAMHGMTKLTACQVATAFNLSRFSSACDVGGCTGALARELAREYPRMQVTVFDLPDIIELAAHFQPPGPQAVQIHFAAGDFFRDPLPSAELYVLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVAQRALMQSLNMLVQTEGKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILATKVAP
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1472162..1472382,1481625..1481747,1486866..1487009,1487875..1488007,1490551..1490735,1494418..1494580,1496627..1497014,1501162..1501270,1503915..1503976,1504587..1504651,1511079..1511210,1521641..1521733))
location: region:1472162-1521733:-1
so has part: feature:1521641-1521733:-1:exon
so has part: feature:1511079-1511210:-1:exon
so has part: feature:1504587-1504651:-1:exon
so has part: feature:1503915-1503976:-1:exon
so has part: feature:1501162-1501270:-1:exon
so has part: feature:1496627-1497014:-1:exon
so has part: feature:1494418-1494580:-1:exon
so has part: feature:1490551-1490735:-1:exon
so has part: feature:1487875-1488007:-1:exon
so has part: feature:1486866-1487009:-1:exon
so has part: feature:1481625-1481747:-1:exon
so has part: feature:1472162-1472382:-1:exon

NP_001166945.1
type: Protein
SIO_000068: ncbiprotein

GI:291045183
type: GI
SIO_000068: ncbigi

CCDS55363.1
type: CCDS
SIO_000068: ccds

position:1472162:-1
position: 1472162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1521733:-1
position: 1521733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1521641-1521733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1511079-1511210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1504587-1504651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1503915-1503976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1501162-1501270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1496627-1497014:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1494418-1494580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1490551-1490735:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1487875-1488007:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1486866-1487009:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1481625-1481747:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1472162-1472382:-1:exon

ASMTL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: isoform 1 is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: N-acetylserotonin O-methyltransferase-like protein isoform 1
translation: MVLCPVIGKLLHKRVVLASASPRRQEILSNAGLRFEVVPSKFKEKLDKASFATPYGYAMETAKQKALEVANRLYQKDLRAPDVVIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHCSSKDHQLDTRVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHGDFLNVVGFPLNHFCKQLVKLYYPPRPEDLRRSVKHDSIPAADTFEDLSDVEGGGSEPTQRDAGSRDEKAEAGEAGQATAEAECHRTRETLPPFPTRLLELIEGFMLSKGLLTACKLKVFDLLKDEAPQKAADIASKVDASACGMERLLDICAAMGLLEKTEQGYSNTETANVYLASDGEYSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQDAYYQSPETRLRFMRAMHGMTKLTACQVATAFNLSRFSSACDVGGCTGALARELAREYPRMQVTVFDLPDIIELAAHFQPPGPQAVQIHFAAGDFFRDPLPSAELYVLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVAQRALMQSLNMLVQTEGKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILATKVAP
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1472162..1472382,1481625..1481747,1486866..1487009,1487875..1488007,1490551..1490735,1494418..1494580,1496627..1497014,1501162..1501270,1503915..1503976,1504587..1504651,1507990..1508037,1511079..1511210,1521641..1521733))
location: region:1472162-1521733:-1
so has part: feature:1521641-1521733:-1:exon
so has part: feature:1511079-1511210:-1:exon
so has part: feature:1507990-1508037:-1:exon
so has part: feature:1504587-1504651:-1:exon
so has part: feature:1503915-1503976:-1:exon
so has part: feature:1501162-1501270:-1:exon
so has part: feature:1496627-1497014:-1:exon
so has part: feature:1494418-1494580:-1:exon
so has part: feature:1490551-1490735:-1:exon
so has part: feature:1487875-1488007:-1:exon
so has part: feature:1486866-1487009:-1:exon
so has part: feature:1481625-1481747:-1:exon
so has part: feature:1472162-1472382:-1:exon

NP_004183.2
type: Protein
SIO_000068: ncbiprotein

GI:117553627
type: GI
SIO_000068: ncbigi

CCDS43917.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:1521641-1521733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1511079-1511210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1507990-1508037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1504587-1504651:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1503915-1503976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1501162-1501270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1496627-1497014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1494418-1494580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1490551-1490735:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1487875-1488007:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1486866-1487009:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1481625-1481747:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1472162-1472382:-1:exon

ASMTL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetylserotonin O-methyltransferase-like isoform X3
translation: MVLCPVIGKLLHKRVVLASASPRRQEILSNAGLRFEVVPSKFKEKLDKASFATPYGYAMETAKQKALEVANRLYQKDLRAPDVVIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHCSSKDHQLDTRVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHGDFLNVVGFPLNHFCKQLVKLYYPPRPEDLRRSVKHDSIPAADTFEDLSDVEGGGSEPTQRDAGSRDEKAEAGEAGQATAEAECHRTRETLPPFPTRLLELIEGFMLSKGLLTACKLKVFDLLKDEAPQKAADIASKVDASACGMERLLDICAAMGLLEKTEQGYSNTETANVYLASDGEYSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQDAYYQSPETRLRFMRAMHGMTKLTACQVATAFNLSRFSSACDVGGCTGALARELAREYPRMQVTVFDLPDIIELAAHFQPPGPQAVQIHFAAGDFFRDPLPSAELYVLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVAQRALMQSLNMLVQTEGKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILATKVAP
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1472162..1472382,1481625..1481747,1486866..1487009,1487875..1488007,1490551..1490735,1494418..1494580,1496627..1497014,1501162..1501270,1503915..1503976,1504587..1504651,1507990..1508037,1511079..1511210,1521641..1521733))
location: region:1472162-1521733:-1
so has part: feature:1521641-1521733:-1:exon
so has part: feature:1511079-1511210:-1:exon
so has part: feature:1507990-1508037:-1:exon
so has part: feature:1504587-1504651:-1:exon
so has part: feature:1503915-1503976:-1:exon
so has part: feature:1501162-1501270:-1:exon
so has part: feature:1496627-1497014:-1:exon
so has part: feature:1494418-1494580:-1:exon
so has part: feature:1490551-1490735:-1:exon
so has part: feature:1487875-1488007:-1:exon
so has part: feature:1486866-1487009:-1:exon
so has part: feature:1481625-1481747:-1:exon
so has part: feature:1472162-1472382:-1:exon

XP_005274840.1
type: Protein
SIO_000068: ncbiprotein

GI:530423013
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1521641-1521733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1511079-1511210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1507990-1508037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1504587-1504651:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1503915-1503976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1501162-1501270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1496627-1497014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1494418-1494580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1490551-1490735:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1487875-1488007:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1486866-1487009:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1481625-1481747:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1472162-1472382:-1:exon

ASMTL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetylserotonin O-methyltransferase-like isoform X4
translation: MGTPWRPPSRRPWRWPTGCTRKTCGPPTWSLERTRSWLSGREHSVFTGVAIVHCSSKDHQLDTRVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHGDFLNVVGFPLNHFCKQLVKLYYPPRPEDLRRSVKHDSIPAADTFEDLSDVEGGGSEPTQRDAGSRDEKAEAGEAGQATAEAECHRTRETLPPFPTRLLELIEGFMLSKGLLTACKLKVFDLLKDEAPQKAADIASKVDASACGMERLLDICAAMGLLEKTEQGYSNTETANVYLASDGEYSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQDAYYQSPETRLRFMRAMHGMTKLTACQVATAFNLSRFSSACDVGGCTGALARELAREYPRMQVTVFDLPDIIELAAHFQPPGPQAVQIHFAAGDFFRDPLPSAELYVLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVAQRALMQSLNMLVQTEGKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILATKVAP
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1472162..1472382,1481625..1481747,1486866..1487009,1487875..1488007,1490551..1490735,1494418..1494580,1496627..1497014,1501162..1501270,1503915..1503976,1507990..1508037,1511079..1511140))
location: region:1472162-1511140:-1
so has part: feature:1511079-1511140:-1:exon
so has part: feature:1507990-1508037:-1:exon
so has part: feature:1503915-1503976:-1:exon
so has part: feature:1501162-1501270:-1:exon
so has part: feature:1496627-1497014:-1:exon
so has part: feature:1494418-1494580:-1:exon
so has part: feature:1490551-1490735:-1:exon
so has part: feature:1487875-1488007:-1:exon
so has part: feature:1486866-1487009:-1:exon
so has part: feature:1481625-1481747:-1:exon
so has part: feature:1472162-1472382:-1:exon

XP_005274841.1
type: Protein
SIO_000068: ncbiprotein

GI:530423015
type: GI
SIO_000068: ncbigi

position:1511140:-1
position: 1511140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1511079-1511140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1507990-1508037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1503915-1503976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1501162-1501270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1496627-1497014:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1494418-1494580:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1490551-1490735:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1487875-1488007:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1486866-1487009:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1481625-1481747:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1472162-1472382:-1:exon

ASMTL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: isoform 2 is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: N-acetylserotonin O-methyltransferase-like protein isoform 2
translation: METAKQKALEVANRLYQKDLRAPDVVIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHCSSKDHQLDTRVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHGDFLNVVGFPLNHFCKQLVKLYYPPRPEDLRRSVKHDSIPAADTFEDLSDVEGGGSEPTQRDAGSRDEKAEAGEAGQATAEAECHRTRETLPPFPTRLLELIEGFMLSKGLLTACKLKVFDLLKDEAPQKAADIASKVDASACGMERLLDICAAMGLLEKTEQGYSNTETANVYLASDGEYSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQDAYYQSPETRLRFMRAMHGMTKLTACQVATAFNLSRFSSACDVGGCTGALARELAREYPRMQVTVFDLPDIIELAAHFQPPGPQAVQIHFAAGDFFRDPLPSAELYVLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVAQRALMQSLNMLVQTEGKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILATKVAP
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1472162..1472382,1481625..1481747,1486866..1487009,1487875..1488007,1490551..1490735,1494418..1494580,1496627..1497014,1501162..1501270,1503915..1503976,1504587..1504651,1507990..1508037,1511079..1511129))
location: region:1472162-1511129:-1
so has part: feature:1511079-1511129:-1:exon
so has part: feature:1507990-1508037:-1:exon
so has part: feature:1504587-1504651:-1:exon
so has part: feature:1503915-1503976:-1:exon
so has part: feature:1501162-1501270:-1:exon
so has part: feature:1496627-1497014:-1:exon
so has part: feature:1494418-1494580:-1:exon
so has part: feature:1490551-1490735:-1:exon
so has part: feature:1487875-1488007:-1:exon
so has part: feature:1486866-1487009:-1:exon
so has part: feature:1481625-1481747:-1:exon
so has part: feature:1472162-1472382:-1:exon

NP_001166944.1
type: Protein
SIO_000068: ncbiprotein

GI:291045181
type: GI
SIO_000068: ncbigi

CCDS55362.1
type: CCDS
SIO_000068: ccds

position:1511129:-1
position: 1511129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1511079-1511129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1507990-1508037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1504587-1504651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1503915-1503976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1501162-1501270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1496627-1497014:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1494418-1494580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1490551-1490735:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1487875-1488007:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1486866-1487009:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1481625-1481747:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1472162-1472382:-1:exon

P2RY8
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: P2Y8
gene: P2RY8
gene synonym: P2Y8
note: purinergic receptor P2Y, G-protein coupled, 8; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(1531465..1606037)
location: region:1531465-1606037:-1
so has part: feature:1531465-1606037:-1:exon
subclass of: SO_0000010

286530
type: Gene
SIO_000068: ncbigene

15524
type: HGNC
SIO_000068: hgnc

06671
type: HPRD
SIO_000068: hprd

300525
type: OMIM
SIO_000068: omim

position:1531465:-1
position: 1531465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1606037:-1
position: 1606037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1531465-1606037:-1:exon

P2RY8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: P2Y8
gene: P2RY8
gene synonym: P2Y8
product: purinergic receptor P2Y, G-protein coupled, 8
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_178129.4
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: complement(join(1531465..1535475,1605814..1606037))
location: region:1531465-1606037:-1
so has part: feature:1605814-1606037:-1:exon
so has part: feature:1531465-1535475:-1:exon

GI:224589133
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1605814-1606037:-1:exon

position:1605814:-1
position: 1605814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1531465-1535475:-1:exon

position:1535475:-1
position: 1535475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

P2RY8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: P2Y8
gene: P2RY8
gene synonym: P2Y8
product: purinergic receptor P2Y, G-protein coupled, 8, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 13 ESTs, 7 Proteins, and 92% coverage by RNAseq alignments, including 1 sample with support for all introns
transcript id: XM_005274779.1
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: complement(join(1531469..1535475,1603349..1603367))
location: region:1531469-1603367:-1
so has part: feature:1603349-1603367:-1:exon
so has part: feature:1531469-1535475:-1:exon

GI:530423004
type: GI
SIO_000068: ncbigi

position:1531469:-1
position: 1531469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1603367:-1
position: 1603367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1603349-1603367:-1:exon

position:1603349:-1
position: 1603349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1531469-1535475:-1:exon

P2RY8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: P2Y8
gene: P2RY8
gene synonym: P2Y8
product: purinergic receptor P2Y, G-protein coupled, 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 13 ESTs, 7 Proteins, and 93% coverage by RNAseq alignments, including 2 samples with support for all introns
transcript id: XM_005274778.1
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: complement(join(1531469..1535475,1535924..1536201))
location: region:1531469-1536201:-1
so has part: feature:1535924-1536201:-1:exon
so has part: feature:1531469-1535475:-1:exon

GI:530423002
type: GI
SIO_000068: ncbigi

position:1536201:-1
position: 1536201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1535924-1536201:-1:exon

position:1535924:-1
position: 1535924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1531469-1535475:-1:exon

P2RY8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: P2Y8
gene: P2RY8
gene synonym: P2Y8
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: P2Y purinoceptor 8
translation: MQVPNSTGPDNATLQMLRNPAIAVALPVVYSLVAAVSIPGNLFSLWVLCRRMGPRSPSVIFMINLSVTDLMLASVLPFQIYYHCNRHHWVFGVLLCNVVTVAFYANMYSSILTMTCISVERFLGVLYPLSSKRWRRRRYAVAACAGTWLLLLTALSPLARTDLTYPVHALGIITCFDVLKWTMLPSVAMWAVFLFTIFILLFLIPFVITVACYTATILKLLRTEEAHGREQRRRAVGLAAVVLLAFVTCFAPNNFVLLAHIVSRLFYGKSYYHVYKLTLCLSCLNNCLDPFVYYFASREFQLRLREYLGCRRVPRDTLDTRRESLFSARTTSVRSEAGAHPEGMEGATRPGLQRQESVF
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: complement(1534372..1535451)
location: region:1534372-1535451:-1
so has part: feature:1534372-1535451:-1:exon

NP_835230.1
type: Protein
SIO_000068: ncbiprotein

GI:30023826
type: GI
SIO_000068: ncbigi

CCDS14115.1
type: CCDS
SIO_000068: ccds

position:1534372:-1
position: 1534372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1535451:-1
position: 1535451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1534372-1535451:-1:exon

P2RY8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: P2Y8
gene: P2RY8
gene synonym: P2Y8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 8 isoform X3
translation: MQVPNSTGPDNATLQMLRNPAIAVALPVVYSLVAAVSIPGNLFSLWVLCRRMGPRSPSVIFMINLSVTDLMLASVLPFQIYYHCNRHHWVFGVLLCNVVTVAFYANMYSSILTMTCISVERFLGVLYPLSSKRWRRRRYAVAACAGTWLLLLTALSPLARTDLTYPVHALGIITCFDVLKWTMLPSVAMWAVFLFTIFILLFLIPFVITVACYTATILKLLRTEEAHGREQRRRAVGLAAVVLLAFVTCFAPNNFVLLAHIVSRLFYGKSYYHVYKLTLCLSCLNNCLDPFVYYFASREFQLRLREYLGCRRVPRDTLDTRRESLFSARTTSVRSEAGAHPEGMEGATRPGLQRQESVF
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: complement(1534372..1535451)
location: region:1534372-1535451:-1
so has part: feature:1534372-1535451:-1:exon

XP_005274835.1
type: Protein
SIO_000068: ncbiprotein

GI:530423003
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1534372-1535451:-1:exon

P2RY8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: P2Y8
gene: P2RY8
gene synonym: P2Y8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 8 isoform X4
translation: MQVPNSTGPDNATLQMLRNPAIAVALPVVYSLVAAVSIPGNLFSLWVLCRRMGPRSPSVIFMINLSVTDLMLASVLPFQIYYHCNRHHWVFGVLLCNVVTVAFYANMYSSILTMTCISVERFLGVLYPLSSKRWRRRRYAVAACAGTWLLLLTALSPLARTDLTYPVHALGIITCFDVLKWTMLPSVAMWAVFLFTIFILLFLIPFVITVACYTATILKLLRTEEAHGREQRRRAVGLAAVVLLAFVTCFAPNNFVLLAHIVSRLFYGKSYYHVYKLTLCLSCLNNCLDPFVYYFASREFQLRLREYLGCRRVPRDTLDTRRESLFSARTTSVRSEAGAHPEGMEGATRPGLQRQESVF
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: complement(1534372..1535451)
location: region:1534372-1535451:-1
so has part: feature:1534372-1535451:-1:exon

XP_005274836.1
type: Protein
SIO_000068: ncbiprotein

GI:530423005
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1534372-1535451:-1:exon

AKAP17A
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: 721P
alternative label: AKAP-17A
alternative label: CCDC133
alternative label: CXYorf3
alternative label: DXYS155E
alternative label: PRKA17A
alternative label: SFRS17A
alternative label: XE7
alternative label: XE7Y
gene: AKAP17A
gene synonym: 721P; AKAP-17A; CCDC133; CXYorf3; DXYS155E; PRKA17A; SFRS17A; XE7; XE7Y
note: A kinase (PRKA) anchor protein 17A; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 1660486..>1671413
location: region:1660486-1671413:1
so has part: feature:1660486-1671413:1:exon
subclass of: SO_0000010

8227
type: Gene
SIO_000068: ncbigene

18783
type: HGNC
SIO_000068: hgnc

312095
type: OMIM
SIO_000068: omim

position:1660486:1
position: 1660486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1671413:1
position: 1671413
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1660486-1671413:1:exon

AKAP17A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: 721P
alternative label: AKAP-17A
alternative label: CCDC133
alternative label: CXYorf3
alternative label: DXYS155E
alternative label: PRKA17A
alternative label: SFRS17A
alternative label: XE7
alternative label: XE7Y
gene: AKAP17A
gene synonym: 721P; AKAP-17A; CCDC133; CXYorf3; DXYS155E; PRKA17A; SFRS17A; XE7; XE7Y
product: A kinase (PRKA) anchor protein 17A, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_005088.2
SIO_010081: AKAP17A
subclass of: SO_0000673
so part of: AKAP17A
location: join(1660486..1660662,1662337..1663117,1664277..1664425,1668085..1668325,1669552..1671413)
location: region:1660486-1671413:1
so has part: feature:1660486-1660662:1:exon
so has part: feature:1662337-1663117:1:exon
so has part: feature:1664277-1664425:1:exon
so has part: feature:1668085-1668325:1:exon
so has part: feature:1669552-1671413:1:exon

GI:41152096
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1660486-1660662:1:exon

position:1660662:1
position: 1660662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1662337-1663117:1:exon

position:1662337:1
position: 1662337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1663117:1
position: 1663117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1664277-1664425:1:exon

position:1664277:1
position: 1664277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1664425:1
position: 1664425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1668085-1668325:1:exon

position:1668085:1
position: 1668085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668325:1
position: 1668325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1669552-1671413:1:exon

position:1669552:1
position: 1669552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AKAP17A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: 721P
alternative label: AKAP-17A
alternative label: CCDC133
alternative label: CXYorf3
alternative label: DXYS155E
alternative label: PRKA17A
alternative label: SFRS17A
alternative label: XE7
alternative label: XE7Y
gene: AKAP17A
gene synonym: 721P; AKAP-17A; CCDC133; CXYorf3; DXYS155E; PRKA17A; SFRS17A; XE7; XE7Y
product: A kinase (PRKA) anchor protein 17A, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_027383.1
SIO_010081: AKAP17A
so part of: AKAP17A
location: join(1660486..1660662,1662337..1663117,1664277..1664425,1668085..1668325,1669031..1669100,1669552..>1671407)
location: region:1660486-1671407:1
so has part: feature:1660486-1660662:1:exon
so has part: feature:1662337-1663117:1:exon
so has part: feature:1664277-1664425:1:exon
so has part: feature:1668085-1668325:1:exon
so has part: feature:1669031-1669100:1:exon
so has part: feature:1669552-1671407:1:exon

GI:225543350
type: GI
SIO_000068: ncbigi

position:1671407:1
position: 1671407
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1660486-1660662:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1662337-1663117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1664277-1664425:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1668085-1668325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1669031-1669100:1:exon

position:1669031:1
position: 1669031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1669100:1
position: 1669100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1669552-1671407:1:exon

AKAP17A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: 721P
alternative label: AKAP-17A
alternative label: CCDC133
alternative label: CXYorf3
alternative label: DXYS155E
alternative label: PRKA17A
alternative label: SFRS17A
alternative label: XE7
alternative label: XE7Y
gene: AKAP17A
gene synonym: 721P; AKAP-17A; CCDC133; CXYorf3; DXYS155E; PRKA17A; SFRS17A; XE7; XE7Y
note: isoform 1 is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: A-kinase anchor protein 17A isoform 1
translation: MAAATIVHDTSEAVELCPAYGLYLKPITKMTISVALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLRISKSTMDFIRFEGEVENKSLVKSFLACLDGKTIKLSGFSDILKVRAAEFKIDFPTRHDWDSFFRDAKDMNETLPGERPDTIHLEGLPCKWFALKESGSEKPSEDVLVKVFEKFGEIRNVDIPMLDPYREEMTGRNFHTFSFGGHLNFEAYVQYREYMGFIQAMSALRGMKLMYKGEDGKAVACNIKVSFDSTKHLSDASIKKRQLERQKLQELEQQREEQKRREKEAEERQRAEERKQKELEELERERKREEKLRKREQKQRDRELRRNQKKLEKLQAEEQKQLQEKIKLEERKLLLAQRNLQSIRLIAELLSRAKAVKLREQEQKEEKLRLQQQEERRRLQEAELRRVEEEKERALGLQRKERELRERLLSILLSKKPDDSHTHDELGVAHADLLQPVLDILQTVSSGCVSATTLHPLGGQPPAGAPKESPAHPEADGAPKSVNGSVAEEAPCKEVQSSCRVVPEDGSPEKRCPGGVLSCIPDNNQQPKGIPACEQNVSRKDTRSEQDKCNREPSKGRGRATGDGLADRHKRERSRARRASSREDGRPRKERRPHKKHAYKDDSPRRRSTSPDHTRSRRSHSKDRHRRERSRERRGSASRKHSRHRRRSERSRSRSPSRHRSTWNR
SIO_010081: AKAP17A
subclass of: SO_0000673
so part of: AKAP17A
location: join(1662356..1663117,1664277..1664425,1668085..1668325,1669552..1670487)
location: region:1662356-1670487:1
so has part: feature:1662356-1663117:1:exon
so has part: feature:1664277-1664425:1:exon
so has part: feature:1668085-1668325:1:exon
so has part: feature:1669552-1670487:1:exon

NP_005079.2
type: Protein
SIO_000068: ncbiprotein

GI:41152097
type: GI
SIO_000068: ncbigi

CCDS14116.1
type: CCDS
SIO_000068: ccds

position:1662356:1
position: 1662356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1670487:1
position: 1670487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1662356-1663117:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1664277-1664425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1668085-1668325:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1669552-1670487:1:exon

ASMT
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: ASMTY
alternative label: HIOMT
alternative label: HIOMTY
gene: ASMT
gene synonym: ASMTY; HIOMT; HIOMTY
note: acetylserotonin O-methyltransferase; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 1664348..1711974
location: region:1664348-1711974:1
so has part: feature:1664348-1711974:1:exon
subclass of: SO_0000010

438
type: Gene
SIO_000068: ncbigene

750
type: HGNC
SIO_000068: hgnc

300015
type: OMIM
SIO_000068: omim

position:1664348:1
position: 1664348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1711974:1
position: 1711974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1664348-1711974:1:exon

ASMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTY
alternative label: HIOMT
alternative label: HIOMTY
gene: ASMT
gene synonym: ASMTY; HIOMT; HIOMTY
product: acetylserotonin O-methyltransferase, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_004043.2
SIO_010081: ASMT
subclass of: SO_0000673
so part of: ASMT
location: join(1664348..1664425,1684026..1684161,1692032..1692206,1693162..1693291,1696596..1696664,1698714..1698832,1701597..1701680,1702043..1702183,1705331..1705453,1711696..1711974)
location: region:1664348-1711974:1
so has part: feature:1664348-1664425:1:exon
so has part: feature:1684026-1684161:1:exon
so has part: feature:1692032-1692206:1:exon
so has part: feature:1693162-1693291:1:exon
so has part: feature:1696596-1696664:1:exon
so has part: feature:1698714-1698832:1:exon
so has part: feature:1701597-1701680:1:exon
so has part: feature:1702043-1702183:1:exon
so has part: feature:1705331-1705453:1:exon
so has part: feature:1711696-1711974:1:exon

GI:157168359
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1664348-1664425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1684026-1684161:1:exon

position:1684026:1
position: 1684026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684161:1
position: 1684161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1692032-1692206:1:exon

position:1692032:1
position: 1692032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692206:1
position: 1692206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1693162-1693291:1:exon

position:1693162:1
position: 1693162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693291:1
position: 1693291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1696596-1696664:1:exon

position:1696596:1
position: 1696596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696664:1
position: 1696664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1698714-1698832:1:exon

position:1698714:1
position: 1698714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698832:1
position: 1698832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1701597-1701680:1:exon

position:1701597:1
position: 1701597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1701680:1
position: 1701680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1702043-1702183:1:exon

position:1702043:1
position: 1702043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1702183:1
position: 1702183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1705331-1705453:1:exon

position:1705331:1
position: 1705331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1705453:1
position: 1705453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1711696-1711974:1:exon

position:1711696:1
position: 1711696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ASMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTY
alternative label: HIOMT
alternative label: HIOMTY
gene: ASMT
gene synonym: ASMTY; HIOMT; HIOMTY
product: acetylserotonin O-methyltransferase, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001171038.1
SIO_010081: ASMT
subclass of: SO_0000673
so part of: ASMT
location: join(1683941..1684161,1692032..1692206,1693162..1693291,1696596..1696664,1698714..1698832,1701597..1701680,1702043..1702183,1705331..1705453,1711696..1711974)
location: region:1683941-1711974:1
so has part: feature:1683941-1684161:1:exon
so has part: feature:1692032-1692206:1:exon
so has part: feature:1693162-1693291:1:exon
so has part: feature:1696596-1696664:1:exon
so has part: feature:1698714-1698832:1:exon
so has part: feature:1701597-1701680:1:exon
so has part: feature:1702043-1702183:1:exon
so has part: feature:1705331-1705453:1:exon
so has part: feature:1711696-1711974:1:exon

GI:283549143
type: GI
SIO_000068: ncbigi

position:1683941:1
position: 1683941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1683941-1684161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1692032-1692206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1693162-1693291:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1696596-1696664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1698714-1698832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1701597-1701680:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1702043-1702183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1705331-1705453:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1711696-1711974:1:exon

ASMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTY
alternative label: HIOMT
alternative label: HIOMTY
gene: ASMT
gene synonym: ASMTY; HIOMT; HIOMTY
product: acetylserotonin O-methyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 83% coverage by RNAseq alignments
transcript id: XM_005274782.1
SIO_010081: ASMT
subclass of: SO_0000673
so part of: ASMT
location: join(1683941..1684161,1692032..1692206,1693162..1693291,1696596..1696664,1698714..1698832,1702043..1702183,1705331..1705453,1711696..1711974)
location: region:1683941-1711974:1
so has part: feature:1683941-1684161:1:exon
so has part: feature:1692032-1692206:1:exon
so has part: feature:1693162-1693291:1:exon
so has part: feature:1696596-1696664:1:exon
so has part: feature:1698714-1698832:1:exon
so has part: feature:1702043-1702183:1:exon
so has part: feature:1705331-1705453:1:exon
so has part: feature:1711696-1711974:1:exon

GI:530423010
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1683941-1684161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1692032-1692206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1693162-1693291:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1696596-1696664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1698714-1698832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1702043-1702183:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1705331-1705453:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1711696-1711974:1:exon

ASMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTY
alternative label: HIOMT
alternative label: HIOMTY
gene: ASMT
gene synonym: ASMTY; HIOMT; HIOMTY
product: acetylserotonin O-methyltransferase, transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001171039.1
SIO_010081: ASMT
subclass of: SO_0000673
so part of: ASMT
location: join(1684026..1684161,1692032..1692206,1693162..1693291,1696596..1696664,1698714..1698832,1705331..1705453,1711696..1711974)
location: region:1684026-1711974:1
so has part: feature:1684026-1684161:1:exon
so has part: feature:1692032-1692206:1:exon
so has part: feature:1693162-1693291:1:exon
so has part: feature:1696596-1696664:1:exon
so has part: feature:1698714-1698832:1:exon
so has part: feature:1705331-1705453:1:exon
so has part: feature:1711696-1711974:1:exon

GI:283549145
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1684026-1684161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1692032-1692206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1693162-1693291:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1696596-1696664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1698714-1698832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1705331-1705453:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1711696-1711974:1:exon

ASMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ASMTY
alternative label: HIOMT
alternative label: HIOMTY
gene: ASMT
gene synonym: ASMTY; HIOMT; HIOMTY
note: isoform 1 is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: acetylserotonin O-methyltransferase isoform 1
translation: MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSPTSQCSMLKYMGRTSYRCWGHLADAVREGRNQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFDLSVFPLMCDLGGTWIKLETIILSKLSQGQKTKHRVFSLIGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK
SIO_010081: ASMT
subclass of: SO_0000673
so part of: ASMT
location: join(1684093..1684161,1692032..1692206,1693162..1693291,1696596..1696664,1698714..1698832,1701597..1701680,1702043..1702183,1705331..1705453,1711696..1711907)
location: region:1684093-1711907:1
so has part: feature:1684093-1684161:1:exon
so has part: feature:1692032-1692206:1:exon
so has part: feature:1693162-1693291:1:exon
so has part: feature:1696596-1696664:1:exon
so has part: feature:1698714-1698832:1:exon
so has part: feature:1701597-1701680:1:exon
so has part: feature:1702043-1702183:1:exon
so has part: feature:1705331-1705453:1:exon
so has part: feature:1711696-1711907:1:exon

NP_004034.2
type: Protein
SIO_000068: ncbiprotein

GI:157168360
type: GI
SIO_000068: ncbigi

CCDS14117.1
type: CCDS
SIO_000068: ccds

position:1684093:1
position: 1684093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1711907:1
position: 1711907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1684093-1684161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1692032-1692206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1693162-1693291:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1696596-1696664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1698714-1698832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1701597-1701680:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1702043-1702183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1705331-1705453:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1711696-1711907:1:exon

ASMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ASMTY
alternative label: HIOMT
alternative label: HIOMTY
gene: ASMT
gene synonym: ASMTY; HIOMT; HIOMTY
note: isoform 1 is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: acetylserotonin O-methyltransferase isoform 1
translation: MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSPTSQCSMLKYMGRTSYRCWGHLADAVREGRNQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFDLSVFPLMCDLGGTWIKLETIILSKLSQGQKTKHRVFSLIGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK
SIO_010081: ASMT
subclass of: SO_0000673
so part of: ASMT
location: join(1684093..1684161,1692032..1692206,1693162..1693291,1696596..1696664,1698714..1698832,1701597..1701680,1702043..1702183,1705331..1705453,1711696..1711907)
location: region:1684093-1711907:1
so has part: feature:1684093-1684161:1:exon
so has part: feature:1692032-1692206:1:exon
so has part: feature:1693162-1693291:1:exon
so has part: feature:1696596-1696664:1:exon
so has part: feature:1698714-1698832:1:exon
so has part: feature:1701597-1701680:1:exon
so has part: feature:1702043-1702183:1:exon
so has part: feature:1705331-1705453:1:exon
so has part: feature:1711696-1711907:1:exon

NP_001164509.1
type: Protein
SIO_000068: ncbiprotein

GI:283549144
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1684093-1684161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1692032-1692206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1693162-1693291:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1696596-1696664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1698714-1698832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1701597-1701680:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1702043-1702183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1705331-1705453:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1711696-1711907:1:exon

ASMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ASMTY
alternative label: HIOMT
alternative label: HIOMTY
gene: ASMT
gene synonym: ASMTY; HIOMT; HIOMTY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetylserotonin O-methyltransferase isoform X2
translation: MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSPTSQCSMLKYMGRTSYRCWGHLADAVREGRNQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK
SIO_010081: ASMT
subclass of: SO_0000673
so part of: ASMT
location: join(1684093..1684161,1692032..1692206,1693162..1693291,1696596..1696664,1698714..1698832,1702043..1702183,1705331..1705453,1711696..1711907)
location: region:1684093-1711907:1
so has part: feature:1684093-1684161:1:exon
so has part: feature:1692032-1692206:1:exon
so has part: feature:1693162-1693291:1:exon
so has part: feature:1696596-1696664:1:exon
so has part: feature:1698714-1698832:1:exon
so has part: feature:1702043-1702183:1:exon
so has part: feature:1705331-1705453:1:exon
so has part: feature:1711696-1711907:1:exon

XP_005274839.1
type: Protein
SIO_000068: ncbiprotein

GI:530423011
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:1684093-1684161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1692032-1692206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1693162-1693291:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1696596-1696664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1698714-1698832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1702043-1702183:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1705331-1705453:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1711696-1711907:1:exon

ASMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ASMTY
alternative label: HIOMT
alternative label: HIOMTY
gene: ASMT
gene synonym: ASMTY; HIOMT; HIOMTY
note: isoform 2 is encoded by transcript variant 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: acetylserotonin O-methyltransferase isoform 2
translation: MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSPTSQCSMLKYMGRTSYRCWGHLADAVREGRNQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFDLSVFPLMCDLGGDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK
SIO_010081: ASMT
subclass of: SO_0000673
so part of: ASMT
location: join(1684093..1684161,1692032..1692206,1693162..1693291,1696596..1696664,1698714..1698832,1705331..1705453,1711696..1711907)
location: region:1684093-1711907:1
so has part: feature:1684093-1684161:1:exon
so has part: feature:1692032-1692206:1:exon
so has part: feature:1693162-1693291:1:exon
so has part: feature:1696596-1696664:1:exon
so has part: feature:1698714-1698832:1:exon
so has part: feature:1705331-1705453:1:exon
so has part: feature:1711696-1711907:1:exon

NP_001164510.1
type: Protein
SIO_000068: ncbiprotein

GI:283549146
type: GI
SIO_000068: ncbigi

CCDS55364.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:1684093-1684161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1692032-1692206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1693162-1693291:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1696596-1696664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1698714-1698832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1705331-1705453:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1711696-1711907:1:exon

DHRSX
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CXorf11
alternative label: DHRS5X
alternative label: DHRS5Y
alternative label: DHRSXY
alternative label: DHRSY
alternative label: SDR46C1
gene: DHRSX
gene synonym: CXorf11; DHRS5X; DHRS5Y; DHRSXY; DHRSY; SDR46C1
note: dehydrogenase/reductase (SDR family) X-linked; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(2087547..2370836)
location: region:2087547-2370836:-1
so has part: feature:2087547-2370836:-1:exon
subclass of: SO_0000010

207063
type: Gene
SIO_000068: ncbigene

18399
type: HGNC
SIO_000068: hgnc

position:2087547:-1
position: 2087547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2370836:-1
position: 2370836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2087547-2370836:-1:exon

DHRSX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CXorf11
alternative label: DHRS5X
alternative label: DHRS5Y
alternative label: DHRSXY
alternative label: DHRSY
alternative label: SDR46C1
gene: DHRSX
gene synonym: CXorf11; DHRS5X; DHRS5Y; DHRSXY; DHRSY; SDR46C1
product: dehydrogenase/reductase (SDR family) X-linked
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_145177.2
SIO_010081: DHRSX
subclass of: SO_0000673
so part of: DHRSX
location: complement(join(2087547..2089270,2111064..2111271,2134781..2134988,2159543..2159644,2276786..2276854,2293238..2293345,2368858..2369015))
location: region:2087547-2369015:-1
so has part: feature:2368858-2369015:-1:exon
so has part: feature:2293238-2293345:-1:exon
so has part: feature:2276786-2276854:-1:exon
so has part: feature:2159543-2159644:-1:exon
so has part: feature:2134781-2134988:-1:exon
so has part: feature:2111064-2111271:-1:exon
so has part: feature:2087547-2089270:-1:exon

GI:193804849
type: GI
SIO_000068: ncbigi

position:2369015:-1
position: 2369015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2368858-2369015:-1:exon

position:2368858:-1
position: 2368858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2293238-2293345:-1:exon

position:2293238:-1
position: 2293238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2293345:-1
position: 2293345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2276786-2276854:-1:exon

position:2276786:-1
position: 2276786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2276854:-1
position: 2276854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2159543-2159644:-1:exon

position:2159543:-1
position: 2159543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2159644:-1
position: 2159644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2134781-2134988:-1:exon

position:2134781:-1
position: 2134781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2134988:-1
position: 2134988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2111064-2111271:-1:exon

position:2111064:-1
position: 2111064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2111271:-1
position: 2111271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2087547-2089270:-1:exon

position:2089270:-1
position: 2089270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHRSX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CXorf11
alternative label: DHRS5X
alternative label: DHRS5Y
alternative label: DHRSXY
alternative label: DHRSY
alternative label: SDR46C1
gene: DHRSX
gene synonym: CXorf11; DHRS5X; DHRS5Y; DHRSXY; DHRSY; SDR46C1
product: dehydrogenase/reductase (SDR family) X-linked, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 27 ESTs, 1 Protein, and 97% coverage by RNAseq alignments, including 1 sample with support for all introns
transcript id: XM_005274787.1
SIO_010081: DHRSX
subclass of: SO_0000673
so part of: DHRSX
location: complement(join(2088801..2089270,2111064..2111271,2134781..2134988,2159543..2159644,2260395..2260515,2276786..2276854,2293238..2293345,2370802..2370836))
location: region:2088801-2370836:-1
so has part: feature:2370802-2370836:-1:exon
so has part: feature:2293238-2293345:-1:exon
so has part: feature:2276786-2276854:-1:exon
so has part: feature:2260395-2260515:-1:exon
so has part: feature:2159543-2159644:-1:exon
so has part: feature:2134781-2134988:-1:exon
so has part: feature:2111064-2111271:-1:exon
so has part: feature:2088801-2089270:-1:exon

GI:530423025
type: GI
SIO_000068: ncbigi

position:2088801:-1
position: 2088801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2370802-2370836:-1:exon

position:2370802:-1
position: 2370802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2293238-2293345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2276786-2276854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2260395-2260515:-1:exon

position:2260395:-1
position: 2260395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2260515:-1
position: 2260515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2159543-2159644:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2134781-2134988:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2111064-2111271:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2088801-2089270:-1:exon

DHRSX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CXorf11
alternative label: DHRS5X
alternative label: DHRS5Y
alternative label: DHRSXY
alternative label: DHRSY
alternative label: SDR46C1
gene: DHRSX
gene synonym: CXorf11; DHRS5X; DHRS5Y; DHRSXY; DHRSY; SDR46C1
product: dehydrogenase/reductase (SDR family) X-linked, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 1 Protein, and 99% coverage by RNAseq alignments, including 3 samples with support for all introns
transcript id: XM_005274785.1
SIO_010081: DHRSX
subclass of: SO_0000673
so part of: DHRSX
location: complement(join(2088801..2089270,2111064..2111271,2134781..2134988,2276786..2276854,2293238..2293345,2368858..2368992))
location: region:2088801-2368992:-1
so has part: feature:2368858-2368992:-1:exon
so has part: feature:2293238-2293345:-1:exon
so has part: feature:2276786-2276854:-1:exon
so has part: feature:2134781-2134988:-1:exon
so has part: feature:2111064-2111271:-1:exon
so has part: feature:2088801-2089270:-1:exon

GI:530423021
type: GI
SIO_000068: ncbigi

position:2368992:-1
position: 2368992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2368858-2368992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2293238-2293345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2276786-2276854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2134781-2134988:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2111064-2111271:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2088801-2089270:-1:exon

DHRSX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CXorf11
alternative label: DHRS5X
alternative label: DHRS5Y
alternative label: DHRSXY
alternative label: DHRSY
alternative label: SDR46C1
gene: DHRSX
gene synonym: CXorf11; DHRS5X; DHRS5Y; DHRSXY; DHRSY; SDR46C1
product: dehydrogenase/reductase (SDR family) X-linked, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 1 Protein, and 97% coverage by RNAseq alignments, including 1 sample with support for all introns
transcript id: XM_005274786.1
SIO_010081: DHRSX
subclass of: SO_0000673
so part of: DHRSX
location: complement(join(2088801..2089270,2111064..2111271,2134781..2134988,2159543..2159644,2260395..2260515,2276786..2276854,2293238..2293345,2368858..2368966))
location: region:2088801-2368966:-1
so has part: feature:2368858-2368966:-1:exon
so has part: feature:2293238-2293345:-1:exon
so has part: feature:2276786-2276854:-1:exon
so has part: feature:2260395-2260515:-1:exon
so has part: feature:2159543-2159644:-1:exon
so has part: feature:2134781-2134988:-1:exon
so has part: feature:2111064-2111271:-1:exon
so has part: feature:2088801-2089270:-1:exon

GI:530423023
type: GI
SIO_000068: ncbigi

position:2368966:-1
position: 2368966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2368858-2368966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2293238-2293345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2276786-2276854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2260395-2260515:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2159543-2159644:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2134781-2134988:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2111064-2111271:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2088801-2089270:-1:exon

DHRSX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CXorf11
alternative label: DHRS5X
alternative label: DHRS5Y
alternative label: DHRSXY
alternative label: DHRSY
alternative label: SDR46C1
gene: DHRSX
gene synonym: CXorf11; DHRS5X; DHRS5Y; DHRSXY; DHRSY; SDR46C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrogenase/reductase SDR family member on chromosome X isoform X4
translation: MSPLSAARAALRVYAVGAAVILAQLLRRCRGGFLEPVFPPRPDRVAIVTGGTDGIGYSTAKHLARLGMHVIIAGNNDSKAKQVVSKIKEETLNDKAGVMMVPQRKTRDGFEEHFGLNYLGHFLLTNLLLDTLKESGSPGHSARVVTVSSATHYVAELNMDDLQSSACYSPHAAYAQSKLALVLFTYHLQRLLAAEGSHVTANVVDPGVVNTDVYKHVFWATRLAKKLLGWLLFKTPDEGAWTSIYAAVTPELEGVGGHYLYNEKETKSLHVTYNQKLQQQLWSKSCEMTGVLDVTL
SIO_010081: DHRSX
subclass of: SO_0000673
so part of: DHRSX
location: complement(join(2089082..2089270,2111064..2111271,2134781..2134988,2276786..2276854,2293238..2293345,2368858..2368966))
location: region:2089082-2368966:-1
so has part: feature:2368858-2368966:-1:exon
so has part: feature:2293238-2293345:-1:exon
so has part: feature:2276786-2276854:-1:exon
so has part: feature:2134781-2134988:-1:exon
so has part: feature:2111064-2111271:-1:exon
so has part: feature:2089082-2089270:-1:exon

XP_005274842.1
type: Protein
SIO_000068: ncbiprotein

GI:530423022
type: GI
SIO_000068: ncbigi

position:2089082:-1
position: 2089082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2368858-2368966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2293238-2293345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2276786-2276854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2134781-2134988:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2111064-2111271:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2089082-2089270:-1:exon

DHRSX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CXorf11
alternative label: DHRS5X
alternative label: DHRS5Y
alternative label: DHRSXY
alternative label: DHRSY
alternative label: SDR46C1
gene: DHRSX
gene synonym: CXorf11; DHRS5X; DHRS5Y; DHRSXY; DHRSY; SDR46C1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: dehydrogenase/reductase SDR family member on chromosome X precursor
translation: MSPLSAARAALRVYAVGAAVILAQLLRRCRGGFLEPVFPPRPDRVAIVTGGTDGIGYSTAKHLARLGMHVIIAGNNDSKAKQVVSKIKEETLNDKVEFLYCDLASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQRKTRDGFEEHFGLNYLGHFLLTNLLLDTLKESGSPGHSARVVTVSSATHYVAELNMDDLQSSACYSPHAAYAQSKLALVLFTYHLQRLLAAEGSHVTANVVDPGVVNTDVYKHVFWATRLAKKLLGWLLFKTPDEGAWTSIYAAVTPELEGVGGHYLYNEKETKSLHVTYNQKLQQQLWSKSCEMTGVLDVTL
SIO_010081: DHRSX
subclass of: SO_0000673
so part of: DHRSX
location: complement(join(2089082..2089270,2111064..2111271,2134781..2134988,2159543..2159644,2276786..2276854,2293238..2293345,2368858..2368966))
location: region:2089082-2368966:-1
so has part: feature:2368858-2368966:-1:exon
so has part: feature:2293238-2293345:-1:exon
so has part: feature:2276786-2276854:-1:exon
so has part: feature:2159543-2159644:-1:exon
so has part: feature:2134781-2134988:-1:exon
so has part: feature:2111064-2111271:-1:exon
so has part: feature:2089082-2089270:-1:exon

NP_660160.2
type: Protein
SIO_000068: ncbiprotein

GI:193804850
type: GI
SIO_000068: ncbigi

CCDS35195.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:2368858-2368966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2293238-2293345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2276786-2276854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2159543-2159644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2134781-2134988:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2111064-2111271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2089082-2089270:-1:exon

DHRSX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CXorf11
alternative label: DHRS5X
alternative label: DHRS5Y
alternative label: DHRSXY
alternative label: DHRSY
alternative label: SDR46C1
gene: DHRSX
gene synonym: CXorf11; DHRS5X; DHRS5Y; DHRSXY; DHRSY; SDR46C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrogenase/reductase SDR family member on chromosome X isoform X5
translation: MTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQRKTRDGFEEHFGLNYLGHFLLTNLLLDTLKESGSPGHSARVVTVSSATHYVAELNMDDLQSSACYSPHAAYAQSKLALVLFTYHLQRLLAAEGSHVTANVVDPGVVNTDVYKHVFWATRLAKKLLGWLLFKTPDEGAWTSIYAAVTPELEGVGGHYLYNEKETKSLHVTYNQKLQQQLWSKSCEMTGVLDVTL
SIO_010081: DHRSX
subclass of: SO_0000673
so part of: DHRSX
location: complement(join(2089082..2089270,2111064..2111271,2134781..2134988,2159543..2159615))
location: region:2089082-2159615:-1
so has part: feature:2159543-2159615:-1:exon
so has part: feature:2134781-2134988:-1:exon
so has part: feature:2111064-2111271:-1:exon
so has part: feature:2089082-2089270:-1:exon

XP_005274843.1
type: Protein
SIO_000068: ncbiprotein

GI:530423024
type: GI
SIO_000068: ncbigi

position:2159615:-1
position: 2159615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2159543-2159615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2134781-2134988:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2111064-2111271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2089082-2089270:-1:exon

DHRSX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CXorf11
alternative label: DHRS5X
alternative label: DHRS5Y
alternative label: DHRSXY
alternative label: DHRSY
alternative label: SDR46C1
gene: DHRSX
gene synonym: CXorf11; DHRS5X; DHRS5Y; DHRSXY; DHRSY; SDR46C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrogenase/reductase SDR family member on chromosome X isoform X6
translation: MTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQRKTRDGFEEHFGLNYLGHFLLTNLLLDTLKESGSPGHSARVVTVSSATHYVAELNMDDLQSSACYSPHAAYAQSKLALVLFTYHLQRLLAAEGSHVTANVVDPGVVNTDVYKHVFWATRLAKKLLGWLLFKTPDEGAWTSIYAAVTPELEGVGGHYLYNEKETKSLHVTYNQKLQQQLWSKSCEMTGVLDVTL
SIO_010081: DHRSX
subclass of: SO_0000673
so part of: DHRSX
location: complement(join(2089082..2089270,2111064..2111271,2134781..2134988,2159543..2159615))
location: region:2089082-2159615:-1
so has part: feature:2159543-2159615:-1:exon
so has part: feature:2134781-2134988:-1:exon
so has part: feature:2111064-2111271:-1:exon
so has part: feature:2089082-2089270:-1:exon

XP_005274844.1
type: Protein
SIO_000068: ncbiprotein

GI:530423026
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2159543-2159615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2134781-2134988:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2111064-2111271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2089082-2089270:-1:exon

LOC101926981
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC101926981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2195129..2206039
location: region:2195129-2206039:1
so has part: feature:2195129-2206039:1:exon

101926981
type: Gene
SIO_000068: ncbigene

position:2195129:1
position: 2195129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2206039:1
position: 2206039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2195129-2206039:1:exon

LOC101926981
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC101926981
product: uncharacterized LOC101926981
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage by RNAseq alignments, including 3 samples with support for all introns
transcript id: XR_247328.1
SIO_010081: LOC101926981
so part of: LOC101926981
location: join(2195129..2195496,2197440..2197566,2205546..2206039)
location: region:2195129-2206039:1
so has part: feature:2195129-2195496:1:exon
so has part: feature:2197440-2197566:1:exon
so has part: feature:2205546-2206039:1:exon

GI:530423051
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2195129-2195496:1:exon

position:2195496:1
position: 2195496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2197440-2197566:1:exon

position:2197440:1
position: 2197440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2197566:1
position: 2197566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2205546-2206039:1:exon

position:2205546:1
position: 2205546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZBED1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: ALTE
alternative label: DREF
alternative label: hDREF
alternative label: TRAMP
gene: ZBED1
gene synonym: ALTE; DREF; hDREF; TRAMP
note: zinc finger, BED-type containing 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(2354455..2369008)
location: region:2354455-2369008:-1
so has part: feature:2354455-2369008:-1:exon
subclass of: SO_0000010

9189
type: Gene
SIO_000068: ncbigene

447
type: HGNC
SIO_000068: hgnc

300178
type: OMIM
SIO_000068: omim

position:2354455:-1
position: 2354455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2369008:-1
position: 2369008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2354455-2369008:-1:exon

ZBED1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ALTE
alternative label: DREF
alternative label: hDREF
alternative label: TRAMP
gene: ZBED1
gene synonym: ALTE; DREF; hDREF; TRAMP
product: zinc finger, BED-type containing 1, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_004729.3
SIO_010081: ZBED1
subclass of: SO_0000673
so part of: ZBED1
location: complement(join(2354455..2358810,2368858..2369008))
location: region:2354455-2369008:-1
so has part: feature:2368858-2369008:-1:exon
so has part: feature:2354455-2358810:-1:exon

GI:57165426
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2368858-2369008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2354455-2358810:-1:exon

position:2358810:-1
position: 2358810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBED1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ALTE
alternative label: DREF
alternative label: hDREF
alternative label: TRAMP
gene: ZBED1
gene synonym: ALTE; DREF; hDREF; TRAMP
product: zinc finger, BED-type containing 1, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001171136.1
SIO_010081: ZBED1
subclass of: SO_0000673
so part of: ZBED1
location: complement(join(2354455..2358813,2368858..2369008))
location: region:2354455-2369008:-1
so has part: feature:2368858-2369008:-1:exon
so has part: feature:2354455-2358813:-1:exon

GI:283806700
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2368858-2369008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2354455-2358813:-1:exon

position:2358813:-1
position: 2358813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBED1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ALTE
alternative label: DREF
alternative label: hDREF
alternative label: TRAMP
gene: ZBED1
gene synonym: ALTE; DREF; hDREF; TRAMP
product: zinc finger, BED-type containing 1, transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001171135.1
SIO_010081: ZBED1
subclass of: SO_0000673
so part of: ZBED1
location: complement(join(2354455..2358813,2368352..2368580))
location: region:2354455-2368580:-1
so has part: feature:2368352-2368580:-1:exon
so has part: feature:2354455-2358813:-1:exon

GI:283806698
type: GI
SIO_000068: ncbigi

position:2368580:-1
position: 2368580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2368352-2368580:-1:exon

position:2368352:-1
position: 2368352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2354455-2358813:-1:exon

ZBED1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ALTE
alternative label: DREF
alternative label: hDREF
alternative label: TRAMP
gene: ZBED1
gene synonym: ALTE; DREF; hDREF; TRAMP
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: zinc finger BED domain-containing protein 1
translation: MENKSLESSQTDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNTSNLSYHLEKNHPEEFCEFVKSNTEQMREAFATAFSKLKPESSQQPGQDALAVKAGHGYDSKKQQELTAAVLGLICEGLYPASIVDEPTFKVLLKTADPRYELPSRKYISTKAIPEKYGAVREVILKELAEATWCGISTDMWRSENQNRAYVTLAAHFLGLGAPNCLSMGSRCLKTFEVPEENTAETITRVLYEVFIEWGISAKVFGATTNYGKDIVKACSLLDVAVHMPCLGHTFNAGIQQAFQLPKLGALLSRCRKLVEYFQQSAVAMYMLYEKQKQQNVAHCMLVSNRVSWWGSTLAMLQRLKEQQFVIAGVLVEDSNNHHLMLEASEWATIEGLVELLQPFKQVAEMLSASRYPTISMVKPLLHMLLNTTLNIKETDSKELSMAKEVIAKELSKTYQETPEIDMFLNVATFLDPRYKRLPFLSAFERQQVENRVVEEAKGLLDKVKDGGYRPAEDKIFPVPEEPPVKKLMRTSTPPPASVINNMLAEIFCQTGGVEDQEEWHAQVVEELSNFKSQKVLGLNEDPLKWWSDRLALFPLLPKVLQKYWCVTATRVAPERLFGSAANVVSAKRNRLAPAHVDEQVFLYENARSGAEAEPEDQDEGEWGLDQEQVFSLGDGVSGGFFGIRDSSFL
SIO_010081: ZBED1
subclass of: SO_0000673
so part of: ZBED1
location: complement(2356676..2358760)
location: region:2356676-2358760:-1
so has part: feature:2356676-2358760:-1:exon

NP_001164606.1
type: Protein
SIO_000068: ncbiprotein

GI:283806699
type: GI
SIO_000068: ncbigi

CCDS14118.1
type: CCDS
SIO_000068: ccds

position:2356676:-1
position: 2356676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2358760:-1
position: 2358760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2356676-2358760:-1:exon

ZBED1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ALTE
alternative label: DREF
alternative label: hDREF
alternative label: TRAMP
gene: ZBED1
gene synonym: ALTE; DREF; hDREF; TRAMP
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: zinc finger BED domain-containing protein 1
translation: MENKSLESSQTDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNTSNLSYHLEKNHPEEFCEFVKSNTEQMREAFATAFSKLKPESSQQPGQDALAVKAGHGYDSKKQQELTAAVLGLICEGLYPASIVDEPTFKVLLKTADPRYELPSRKYISTKAIPEKYGAVREVILKELAEATWCGISTDMWRSENQNRAYVTLAAHFLGLGAPNCLSMGSRCLKTFEVPEENTAETITRVLYEVFIEWGISAKVFGATTNYGKDIVKACSLLDVAVHMPCLGHTFNAGIQQAFQLPKLGALLSRCRKLVEYFQQSAVAMYMLYEKQKQQNVAHCMLVSNRVSWWGSTLAMLQRLKEQQFVIAGVLVEDSNNHHLMLEASEWATIEGLVELLQPFKQVAEMLSASRYPTISMVKPLLHMLLNTTLNIKETDSKELSMAKEVIAKELSKTYQETPEIDMFLNVATFLDPRYKRLPFLSAFERQQVENRVVEEAKGLLDKVKDGGYRPAEDKIFPVPEEPPVKKLMRTSTPPPASVINNMLAEIFCQTGGVEDQEEWHAQVVEELSNFKSQKVLGLNEDPLKWWSDRLALFPLLPKVLQKYWCVTATRVAPERLFGSAANVVSAKRNRLAPAHVDEQVFLYENARSGAEAEPEDQDEGEWGLDQEQVFSLGDGVSGGFFGIRDSSFL
SIO_010081: ZBED1
subclass of: SO_0000673
so part of: ZBED1
location: complement(2356676..2358760)
location: region:2356676-2358760:-1
so has part: feature:2356676-2358760:-1:exon

NP_001164607.1
type: Protein
SIO_000068: ncbiprotein

GI:283806701
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2356676-2358760:-1:exon

ZBED1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ALTE
alternative label: DREF
alternative label: hDREF
alternative label: TRAMP
gene: ZBED1
gene synonym: ALTE; DREF; hDREF; TRAMP
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: zinc finger BED domain-containing protein 1
translation: MENKSLESSQTDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNTSNLSYHLEKNHPEEFCEFVKSNTEQMREAFATAFSKLKPESSQQPGQDALAVKAGHGYDSKKQQELTAAVLGLICEGLYPASIVDEPTFKVLLKTADPRYELPSRKYISTKAIPEKYGAVREVILKELAEATWCGISTDMWRSENQNRAYVTLAAHFLGLGAPNCLSMGSRCLKTFEVPEENTAETITRVLYEVFIEWGISAKVFGATTNYGKDIVKACSLLDVAVHMPCLGHTFNAGIQQAFQLPKLGALLSRCRKLVEYFQQSAVAMYMLYEKQKQQNVAHCMLVSNRVSWWGSTLAMLQRLKEQQFVIAGVLVEDSNNHHLMLEASEWATIEGLVELLQPFKQVAEMLSASRYPTISMVKPLLHMLLNTTLNIKETDSKELSMAKEVIAKELSKTYQETPEIDMFLNVATFLDPRYKRLPFLSAFERQQVENRVVEEAKGLLDKVKDGGYRPAEDKIFPVPEEPPVKKLMRTSTPPPASVINNMLAEIFCQTGGVEDQEEWHAQVVEELSNFKSQKVLGLNEDPLKWWSDRLALFPLLPKVLQKYWCVTATRVAPERLFGSAANVVSAKRNRLAPAHVDEQVFLYENARSGAEAEPEDQDEGEWGLDQEQVFSLGDGVSGGFFGIRDSSFL
SIO_010081: ZBED1
subclass of: SO_0000673
so part of: ZBED1
location: complement(2356676..2358760)
location: region:2356676-2358760:-1
so has part: feature:2356676-2358760:-1:exon

NP_004720.1
type: Protein
SIO_000068: ncbiprotein

GI:4759258
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2356676-2358760:-1:exon

LOC101927008
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC101927008
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2434068..2477205)
location: region:2434068-2477205:-1
so has part: feature:2434068-2477205:-1:exon

101927008
type: Gene
SIO_000068: ncbigene

position:2434068:-1
position: 2434068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2477205:-1
position: 2477205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2434068-2477205:-1:exon

LOC101927008
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC101927008
product: uncharacterized LOC101927008
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, and 100% coverage by RNAseq alignments, including 3 samples with support for all introns
transcript id: XR_247329.1
SIO_010081: LOC101927008
so part of: LOC101927008
location: complement(join(2434068..2435333,2477147..2477205))
location: region:2434068-2477205:-1
so has part: feature:2477147-2477205:-1:exon
so has part: feature:2434068-2435333:-1:exon

GI:530423052
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2477147-2477205:-1:exon

position:2477147:-1
position: 2477147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2434068-2435333:-1:exon

position:2435333:-1
position: 2435333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CD99P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CD99L1
alternative label: CXYorf12
alternative label: MIC2R
alternative label: NCRNA00103
gene: CD99P1
gene synonym: CD99L1; CXYorf12; MIC2R; NCRNA00103
note: CD99 molecule pseudogene 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
pseudo: true
so part of: sequence
location: 2477306..2525270
location: region:2477306-2525270:1
so has part: feature:2477306-2525270:1:exon

401577
type: Gene
SIO_000068: ncbigene

7083
type: HGNC
SIO_000068: hgnc

position:2477306:1
position: 2477306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2525270:1
position: 2525270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2477306-2525270:1:exon

CD99P1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: CD99L1
alternative label: CXYorf12
alternative label: MIC2R
alternative label: NCRNA00103
gene: CD99P1
gene synonym: CD99L1; CXYorf12; MIC2R; NCRNA00103
product: CD99 molecule pseudogene 1, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
pseudo: true
transcript id: NR_033380.1
SIO_010081: CD99P1
so part of: CD99P1
location: join(2477306..2477522,2479037..2479079,2480191..2480259,2483857..2484010,2486781..2486825,2487470..2487538,2491426..2491494,2494638..2494683,2523068..2525270)
location: region:2477306-2525270:1
so has part: feature:2477306-2477522:1:exon
so has part: feature:2479037-2479079:1:exon
so has part: feature:2480191-2480259:1:exon
so has part: feature:2483857-2484010:1:exon
so has part: feature:2486781-2486825:1:exon
so has part: feature:2487470-2487538:1:exon
so has part: feature:2491426-2491494:1:exon
so has part: feature:2494638-2494683:1:exon
so has part: feature:2523068-2525270:1:exon

GI:291045139
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2477306-2477522:1:exon

position:2477522:1
position: 2477522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2479037-2479079:1:exon

position:2479037:1
position: 2479037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2479079:1
position: 2479079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2480191-2480259:1:exon

position:2480191:1
position: 2480191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2480259:1
position: 2480259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2483857-2484010:1:exon

position:2483857:1
position: 2483857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2484010:1
position: 2484010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2486781-2486825:1:exon

position:2486781:1
position: 2486781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2486825:1
position: 2486825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2487470-2487538:1:exon

position:2487470:1
position: 2487470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2487538:1
position: 2487538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2491426-2491494:1:exon

position:2491426:1
position: 2491426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2491494:1
position: 2491494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2494638-2494683:1:exon

position:2494638:1
position: 2494638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2494683:1
position: 2494683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2523068-2525270:1:exon

position:2523068:1
position: 2523068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD99P1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: CD99L1
alternative label: CXYorf12
alternative label: MIC2R
alternative label: NCRNA00103
gene: CD99P1
gene synonym: CD99L1; CXYorf12; MIC2R; NCRNA00103
product: CD99 molecule pseudogene 1, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
pseudo: true
transcript id: NR_033381.1
SIO_010081: CD99P1
so part of: CD99P1
location: join(2477306..2477522,2479037..2479079,2480191..2480259,2483857..2484010,2486781..2486825,2487470..2487538,2490731..2490775,2491426..2491494,2494638..2494683,2506015..2506370)
location: region:2477306-2506370:1
so has part: feature:2477306-2477522:1:exon
so has part: feature:2479037-2479079:1:exon
so has part: feature:2480191-2480259:1:exon
so has part: feature:2483857-2484010:1:exon
so has part: feature:2486781-2486825:1:exon
so has part: feature:2487470-2487538:1:exon
so has part: feature:2490731-2490775:1:exon
so has part: feature:2491426-2491494:1:exon
so has part: feature:2494638-2494683:1:exon
so has part: feature:2506015-2506370:1:exon

GI:291045140
type: GI
SIO_000068: ncbigi

position:2506370:1
position: 2506370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2477306-2477522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2479037-2479079:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2480191-2480259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2483857-2484010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2486781-2486825:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2487470-2487538:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2490731-2490775:1:exon

position:2490731:1
position: 2490731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2490775:1
position: 2490775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2491426-2491494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2494638-2494683:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2506015-2506370:1:exon

position:2506015:1
position: 2506015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LINC00102
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: NCRNA00102
gene: LINC00102
gene synonym: NCRNA00102
note: long intergenic non-protein coding RNA 102; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(<2481032..2483388)
location: region:2481032-2483388:-1
so has part: feature:2481032-2483388:-1:exon

100359394
type: Gene
SIO_000068: ncbigene

30470
type: HGNC
SIO_000068: hgnc

position:2481032:-1
position: 2481032
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:2483388:-1
position: 2483388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2481032-2483388:-1:exon

LINC00102
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: NCRNA00102
gene: LINC00102
gene synonym: NCRNA00102
product: long intergenic non-protein coding RNA 102
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_037842.1
SIO_010081: LINC00102
so part of: LINC00102
location: complement(join(<2481032..2481737,2482758..2483388))
location: region:2481032-2483388:-1
so has part: feature:2482758-2483388:-1:exon
so has part: feature:2481032-2481737:-1:exon

GI:323276600
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2482758-2483388:-1:exon

position:2482758:-1
position: 2482758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2481032-2481737:-1:exon

position:2481737:-1
position: 2481737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CD99
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
note: CD99 molecule; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 2559228..2609350
location: region:2559228-2609350:1
so has part: feature:2559228-2609350:1:exon
subclass of: SO_0000010

4267
type: Gene
SIO_000068: ncbigene

7082
type: HGNC
SIO_000068: hgnc

313470
type: OMIM
SIO_000068: omim

position:2559228:1
position: 2559228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2609350:1
position: 2609350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2559228-2609350:1:exon

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
product: CD99 molecule, transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001277710.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559228..2559468,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2601398..2601415,2606244..2606297,2608820..2609350)
location: region:2559228-2609350:1
so has part: feature:2559228-2559468:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2601398-2601415:1:exon
so has part: feature:2606244-2606297:1:exon
so has part: feature:2608820-2609350:1:exon

GI:478733019
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559228-2559468:1:exon

position:2559468:1
position: 2559468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

position:2582463:1
position: 2582463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2582495:1
position: 2582495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

position:2585646:1
position: 2585646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2585693:1
position: 2585693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

position:2587702:1
position: 2587702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2587746:1
position: 2587746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

position:2588397:1
position: 2588397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2588465:1
position: 2588465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

position:2590668:1
position: 2590668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2590715:1
position: 2590715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

position:2591355:1
position: 2591355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2591405:1
position: 2591405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

position:2594301:1
position: 2594301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2594414:1
position: 2594414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2601398-2601415:1:exon

position:2601398:1
position: 2601398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2601415:1
position: 2601415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2606244-2606297:1:exon

position:2606244:1
position: 2606244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2606297:1
position: 2606297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2608820-2609350:1:exon

position:2608820:1
position: 2608820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
product: CD99 molecule, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_002414.3
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559228..2559468,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2606241..2606297,2608820..2609350)
location: region:2559228-2609350:1
so has part: feature:2559228-2559468:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2606241-2606297:1:exon
so has part: feature:2608820-2609350:1:exon

GI:34147599
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559228-2559468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2606241-2606297:1:exon

position:2606241:1
position: 2606241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2608820-2609350:1:exon

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
product: CD99 molecule, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001122898.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559228..2559468,2582463..2582495,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2606241..2606297,2608820..2609350)
location: region:2559228-2609350:1
so has part: feature:2559228-2559468:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2606241-2606297:1:exon
so has part: feature:2608820-2609350:1:exon

GI:171543878
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559228-2559468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2606241-2606297:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2608820-2609350:1:exon

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
product: CD99 molecule, transcript variant X23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, and 100% coverage by RNAseq alignments, including 1 sample with support for all introns
transcript id: XM_005274798.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559237..2559468,2582463..2582495,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2606244..2606297,2608820..2609350)
location: region:2559237-2609350:1
so has part: feature:2559237-2559468:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2606244-2606297:1:exon
so has part: feature:2608820-2609350:1:exon

GI:530423047
type: GI
SIO_000068: ncbigi

position:2559237:1
position: 2559237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2559237-2559468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2606244-2606297:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2608820-2609350:1:exon

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
product: CD99 molecule, transcript variant X21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, and 100% coverage by RNAseq alignments, including 12 samples with support for all introns
transcript id: XM_005274796.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559238..2559468,2582463..2582495,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2595334..2595388,2606241..2606297,2608820..2609350)
location: region:2559238-2609350:1
so has part: feature:2559238-2559468:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2595334-2595388:1:exon
so has part: feature:2606241-2606297:1:exon
so has part: feature:2608820-2609350:1:exon

GI:530423043
type: GI
SIO_000068: ncbigi

position:2559238:1
position: 2559238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2559238-2559468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2595334-2595388:1:exon

position:2595334:1
position: 2595334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2595388:1
position: 2595388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2606241-2606297:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2608820-2609350:1:exon

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
product: CD99 molecule, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 ESTs, and 100% coverage by RNAseq alignments, including 12 samples with support for all introns
transcript id: XM_005274794.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559333..2559468,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2595334..2595388,2606241..2606297,2608820..2609350)
location: region:2559333-2609350:1
so has part: feature:2559333-2559468:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2595334-2595388:1:exon
so has part: feature:2606241-2606297:1:exon
so has part: feature:2608820-2609350:1:exon

GI:530423039
type: GI
SIO_000068: ncbigi

position:2559333:1
position: 2559333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2559333-2559468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2595334-2595388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2606241-2606297:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2608820-2609350:1:exon

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
product: CD99 molecule, transcript variant X22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 ESTs, and 100% coverage by RNAseq alignments
transcript id: XM_005274797.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559333..2559468,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2606244..2606297,2608820..2609350)
location: region:2559333-2609350:1
so has part: feature:2559333-2559468:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2606244-2606297:1:exon
so has part: feature:2608820-2609350:1:exon

GI:530423045
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559333-2559468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2606244-2606297:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2608820-2609350:1:exon

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
product: CD99 molecule, transcript variant X24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, and 100% coverage by RNAseq alignments, including 14 samples with support for all introns
transcript id: XM_005274799.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559333..2559468,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2601398..2602019)
location: region:2559333-2602019:1
so has part: feature:2559333-2559468:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2601398-2602019:1:exon

GI:530423049
type: GI
SIO_000068: ncbigi

position:2602019:1
position: 2602019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2559333-2559468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2601398-2602019:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD99 antigen isoform X19
translation: MARGAALALLLFGLLGVLVAAPDGGFDLSDALPDNENKKPTAIPKKPSAGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENGQLAGSLGPCIGIRREAGNRTRGGGHGEPPECQRRASCSAYSFREIEDCRQKQPRRWQQG
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559402..2559468,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2595334..2595388,2606241..2606297,2608820..2608889)
location: region:2559402-2608889:1
so has part: feature:2559402-2559468:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2595334-2595388:1:exon
so has part: feature:2606241-2606297:1:exon
so has part: feature:2608820-2608889:1:exon

XP_005274851.1
type: Protein
SIO_000068: ncbiprotein

GI:530423040
type: GI
SIO_000068: ncbigi

position:2559402:1
position: 2559402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2608889:1
position: 2608889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2559402-2559468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2595334-2595388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2606241-2606297:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2608820-2608889:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD99 antigen isoform X21
translation: MARGAALALLLFGLLGVLVAAPDGGFDLSDALPGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENGQLAGSLGPCIGIRREAGNRTRGGGHGEPPECQRRASCSAYSFREIEDCRQKQPRRWQQG
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559402..2559468,2582463..2582495,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2595334..2595388,2606241..2606297,2608820..2608889)
location: region:2559402-2608889:1
so has part: feature:2559402-2559468:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2595334-2595388:1:exon
so has part: feature:2606241-2606297:1:exon
so has part: feature:2608820-2608889:1:exon

XP_005274853.1
type: Protein
SIO_000068: ncbiprotein

GI:530423044
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559402-2559468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2595334-2595388:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2606241-2606297:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2608820-2608889:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
note: isoform a precursor is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: CD99 antigen isoform a precursor
translation: MARGAALALLLFGLLGVLVAAPDGGFDLSDALPDNENKKPTAIPKKPSAGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENAEQGEVDMESHRNANAEPAVQRTLLEK
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559402..2559468,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2606241..2606297,2608820..2608845)
location: region:2559402-2608845:1
so has part: feature:2559402-2559468:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2606241-2606297:1:exon
so has part: feature:2608820-2608845:1:exon

NP_002405.1
type: Protein
SIO_000068: ncbiprotein

GI:4505183
type: GI
SIO_000068: ncbigi

CCDS14119.1
type: CCDS
SIO_000068: ccds

position:2608845:1
position: 2608845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2559402-2559468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2606241-2606297:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2608820-2608845:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD99 antigen isoform X22
translation: MARGAALALLLFGLLGVLVAAPDGGFDLSDALPDNENKKPTAIPKKPSAGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENEQGEVDMESHRNANAEPAVQRTLLEK
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559402..2559468,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2606244..2606297,2608820..2608845)
location: region:2559402-2608845:1
so has part: feature:2559402-2559468:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2606244-2606297:1:exon
so has part: feature:2608820-2608845:1:exon

XP_005274854.1
type: Protein
SIO_000068: ncbiprotein

GI:530423046
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559402-2559468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2606244-2606297:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2608820-2608845:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
note: isoform b precursor is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: CD99 antigen isoform b precursor
translation: MARGAALALLLFGLLGVLVAAPDGGFDLSDALPGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENAEQGEVDMESHRNANAEPAVQRTLLEK
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559402..2559468,2582463..2582495,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2606241..2606297,2608820..2608845)
location: region:2559402-2608845:1
so has part: feature:2559402-2559468:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2606241-2606297:1:exon
so has part: feature:2608820-2608845:1:exon

NP_001116370.1
type: Protein
SIO_000068: ncbiprotein

GI:171543879
type: GI
SIO_000068: ncbigi

CCDS48071.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:2559402-2559468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2606241-2606297:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2608820-2608845:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD99 antigen isoform X23
translation: MARGAALALLLFGLLGVLVAAPDGGFDLSDALPGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENEQGEVDMESHRNANAEPAVQRTLLEK
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559402..2559468,2582463..2582495,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2606244..2606297,2608820..2608845)
location: region:2559402-2608845:1
so has part: feature:2559402-2559468:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2606244-2606297:1:exon
so has part: feature:2608820-2608845:1:exon

XP_005274855.1
type: Protein
SIO_000068: ncbiprotein

GI:530423048
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559402-2559468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2606244-2606297:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2608820-2608845:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD99 antigen isoform X24
translation: MARGAALALLLFGLLGVLVAAPDGGFDLSDALPDNENKKPTAIPKKPSAGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENDG
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559402..2559468,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2601398..2601405)
location: region:2559402-2601405:1
so has part: feature:2559402-2559468:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2601398-2601405:1:exon

XP_005274856.1
type: Protein
SIO_000068: ncbiprotein

GI:530423050
type: GI
SIO_000068: ncbigi

position:2601405:1
position: 2601405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2559402-2559468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2601398-2601405:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
note: isoform c precursor is encoded by transcript variant 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: CD99 antigen isoform c precursor
translation: MARGAALALLLFGLLGVLVAAPDGGFDLSDALPDNENKKPTAIPKKPSAGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENDG
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559402..2559468,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2601398..2601405)
location: region:2559402-2601405:1
so has part: feature:2559402-2559468:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2601398-2601405:1:exon

NP_001264639.1
type: Protein
SIO_000068: ncbiprotein

GI:478733020
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559402-2559468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2601398-2601405:1:exon

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
product: CD99 molecule, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, and 100% coverage by RNAseq alignments, including 10 samples with support for all introns
transcript id: XM_005274788.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559538..2559736,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2595334..2595388,2606241..2606297,2608820..2609350)
location: region:2559538-2609350:1
so has part: feature:2559538-2559736:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2595334-2595388:1:exon
so has part: feature:2606241-2606297:1:exon
so has part: feature:2608820-2609350:1:exon

GI:530423027
type: GI
SIO_000068: ncbigi

position:2559538:1
position: 2559538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2559538-2559736:1:exon

position:2559736:1
position: 2559736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2595334-2595388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2606241-2606297:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2608820-2609350:1:exon

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
product: CD99 molecule, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, and 100% coverage by RNAseq alignments, including 7 samples with support for all introns
transcript id: XM_005274789.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559538..2559736,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2595334..2595388,2606244..2606297,2608820..2609350)
location: region:2559538-2609350:1
so has part: feature:2559538-2559736:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2595334-2595388:1:exon
so has part: feature:2606244-2606297:1:exon
so has part: feature:2608820-2609350:1:exon

GI:530423029
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559538-2559736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2595334-2595388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2606244-2606297:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2608820-2609350:1:exon

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
product: CD99 molecule, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 ESTs, and 100% coverage by RNAseq alignments, including 12 samples with support for all introns
transcript id: XM_005274791.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559538..2559736,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2606241..2606297,2608820..2609350)
location: region:2559538-2609350:1
so has part: feature:2559538-2559736:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2606241-2606297:1:exon
so has part: feature:2608820-2609350:1:exon

GI:530423033
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559538-2559736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2606241-2606297:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2608820-2609350:1:exon

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
product: CD99 molecule, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, and 100% coverage by RNAseq alignments, including 7 samples with support for all introns
transcript id: XM_005274792.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559538..2559736,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2606244..2606297,2608820..2609350)
location: region:2559538-2609350:1
so has part: feature:2559538-2559736:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2606244-2606297:1:exon
so has part: feature:2608820-2609350:1:exon

GI:530423035
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559538-2559736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2606244-2606297:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2608820-2609350:1:exon

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
product: CD99 molecule, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, and 100% coverage by RNAseq alignments, including 10 samples with support for all introns
transcript id: XM_005274790.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559538..2559736,2582463..2582495,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2595334..2595388,2606241..2606297,2608820..2609350)
location: region:2559538-2609350:1
so has part: feature:2559538-2559736:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2595334-2595388:1:exon
so has part: feature:2606241-2606297:1:exon
so has part: feature:2608820-2609350:1:exon

GI:530423031
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559538-2559736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2595334-2595388:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2606241-2606297:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2608820-2609350:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD99 antigen isoform X13
translation: MRRWGRPAGTPGASSLPGRTRCAHGGPGPEEAPTFSPTLFLEPFQREKSAFVVGVANSYMWGGLGRDGGFDLSDALPDNENKKPTAIPKKPSAGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENGQLAGSLGPCIGIRREAGNRTRGGGHGEPPECQRRASCSAYSFREIEDCRQKQPRRWQQG
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559538..2559736,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2595334..2595388,2606241..2606297,2608820..2608889)
location: region:2559538-2608889:1
so has part: feature:2559538-2559736:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2595334-2595388:1:exon
so has part: feature:2606241-2606297:1:exon
so has part: feature:2608820-2608889:1:exon

XP_005274845.1
type: Protein
SIO_000068: ncbiprotein

GI:530423028
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559538-2559736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2595334-2595388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2606241-2606297:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2608820-2608889:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD99 antigen isoform X14
translation: MRRWGRPAGTPGASSLPGRTRCAHGGPGPEEAPTFSPTLFLEPFQREKSAFVVGVANSYMWGGLGRDGGFDLSDALPDNENKKPTAIPKKPSAGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENGQLAGSLGPCIGIRREAGKTRGGGHGEPPECQRRASCSAYSFREIEDCRQKQPRRWQQG
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559538..2559736,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2595334..2595388,2606244..2606297,2608820..2608889)
location: region:2559538-2608889:1
so has part: feature:2559538-2559736:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2595334-2595388:1:exon
so has part: feature:2606244-2606297:1:exon
so has part: feature:2608820-2608889:1:exon

XP_005274846.1
type: Protein
SIO_000068: ncbiprotein

GI:530423030
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559538-2559736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2595334-2595388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2606244-2606297:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2608820-2608889:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD99 antigen isoform X15
translation: MRRWGRPAGTPGASSLPGRTRCAHGGPGPEEAPTFSPTLFLEPFQREKSAFVVGVANSYMWGGLGRDGGFDLSDALPGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENGQLAGSLGPCIGIRREAGNRTRGGGHGEPPECQRRASCSAYSFREIEDCRQKQPRRWQQG
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559538..2559736,2582463..2582495,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2595334..2595388,2606241..2606297,2608820..2608889)
location: region:2559538-2608889:1
so has part: feature:2559538-2559736:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2595334-2595388:1:exon
so has part: feature:2606241-2606297:1:exon
so has part: feature:2608820-2608889:1:exon

XP_005274847.1
type: Protein
SIO_000068: ncbiprotein

GI:530423032
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559538-2559736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2595334-2595388:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2606241-2606297:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2608820-2608889:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD99 antigen isoform X16
translation: MRRWGRPAGTPGASSLPGRTRCAHGGPGPEEAPTFSPTLFLEPFQREKSAFVVGVANSYMWGGLGRDGGFDLSDALPDNENKKPTAIPKKPSAGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENAEQGEVDMESHRNANAEPAVQRTLLEK
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559538..2559736,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2606241..2606297,2608820..2608845)
location: region:2559538-2608845:1
so has part: feature:2559538-2559736:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2606241-2606297:1:exon
so has part: feature:2608820-2608845:1:exon

XP_005274848.1
type: Protein
SIO_000068: ncbiprotein

GI:530423034
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559538-2559736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2606241-2606297:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2608820-2608845:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD99 antigen isoform X17
translation: MRRWGRPAGTPGASSLPGRTRCAHGGPGPEEAPTFSPTLFLEPFQREKSAFVVGVANSYMWGGLGRDGGFDLSDALPDNENKKPTAIPKKPSAGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENEQGEVDMESHRNANAEPAVQRTLLEK
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559538..2559736,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2606244..2606297,2608820..2608845)
location: region:2559538-2608845:1
so has part: feature:2559538-2559736:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2606244-2606297:1:exon
so has part: feature:2608820-2608845:1:exon

XP_005274849.1
type: Protein
SIO_000068: ncbiprotein

GI:530423036
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559538-2559736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2606244-2606297:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2608820-2608845:1:exon

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
product: CD99 molecule, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 100% coverage by RNAseq alignments, including 7 samples with support for all introns
transcript id: XM_005274793.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559538..2559736,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2595334..2595388,2601398..2602019)
location: region:2559538-2602019:1
so has part: feature:2559538-2559736:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2595334-2595388:1:exon
so has part: feature:2601398-2602019:1:exon

GI:530423037
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559538-2559736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2595334-2595388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2601398-2602019:1:exon

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
product: CD99 molecule, transcript variant X20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 100% coverage by RNAseq alignments, including 8 samples with support for all introns
transcript id: XM_005274795.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559538..2559736,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2601398..2602019)
location: region:2559538-2602019:1
so has part: feature:2559538-2559736:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2601398-2602019:1:exon

GI:530423041
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559538-2559736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2601398-2602019:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD99 antigen isoform X18
translation: MRRWGRPAGTPGASSLPGRTRCAHGGPGPEEAPTFSPTLFLEPFQREKSAFVVGVANSYMWGGLGRDGGFDLSDALPDNENKKPTAIPKKPSAGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENGQLAGSLGPCIGIRREAGKWLKT
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559538..2559736,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2595334..2595388,2601398..2601413)
location: region:2559538-2601413:1
so has part: feature:2559538-2559736:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2595334-2595388:1:exon
so has part: feature:2601398-2601413:1:exon

XP_005274850.1
type: Protein
SIO_000068: ncbiprotein

GI:530423038
type: GI
SIO_000068: ncbigi

position:2601413:1
position: 2601413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2559538-2559736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2595334-2595388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2601398-2601413:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: HBA71
alternative label: MIC2
alternative label: MIC2X
alternative label: MIC2Y
alternative label: MSK5X
gene: CD99
gene synonym: HBA71; MIC2; MIC2X; MIC2Y; MSK5X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD99 antigen isoform X20
translation: MRRWGRPAGTPGASSLPGRTRCAHGGPGPEEAPTFSPTLFLEPFQREKSAFVVGVANSYMWGGLGRDGGFDLSDALPDNENKKPTAIPKKPSAGDDFDLGDAVVDGENDDPRPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENDG
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(2559538..2559736,2582463..2582495,2585646..2585693,2587702..2587746,2588397..2588465,2590668..2590715,2591355..2591405,2594301..2594414,2601398..2601405)
location: region:2559538-2601405:1
so has part: feature:2559538-2559736:1:exon
so has part: feature:2582463-2582495:1:exon
so has part: feature:2585646-2585693:1:exon
so has part: feature:2587702-2587746:1:exon
so has part: feature:2588397-2588465:1:exon
so has part: feature:2590668-2590715:1:exon
so has part: feature:2591355-2591405:1:exon
so has part: feature:2594301-2594414:1:exon
so has part: feature:2601398-2601405:1:exon

XP_005274852.1
type: Protein
SIO_000068: ncbiprotein

GI:530423042
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2559538-2559736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582463-2582495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585646-2585693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587702-2587746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588397-2588465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590668-2590715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591355-2591405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594301-2594414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2601398-2601405:1:exon

XGPY2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: XG
alternative label: XGPY
gene: XGPY2
gene synonym: XG; XGPY
note: Xg pseudogene, Y-linked 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
pseudo: true
so part of: sequence
location: 2620337..2643037
location: region:2620337-2643037:1
so has part: feature:2620337-2643037:1:exon

100132596
type: Gene
SIO_000068: ncbigene

34022
type: HGNC
SIO_000068: hgnc

position:2620337:1
position: 2620337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2643037:1
position: 2643037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2620337-2643037:1:exon

XGPY2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: XG
alternative label: XGPY
gene: XGPY2
gene synonym: XG; XGPY
product: Xg pseudogene, Y-linked 2
inference: similar to RNA sequence (same species):RefSeq:NR_003254.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
pseudo: true
transcript id: NR_003254.1
SIO_010081: XGPY2
so part of: XGPY2
location: join(2620337..2620376,2638591..2638632,2642757..2643037)
location: region:2620337-2643037:1
so has part: feature:2620337-2620376:1:exon
so has part: feature:2638591-2638632:1:exon
so has part: feature:2642757-2643037:1:exon

GI:116875816
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2620337-2620376:1:exon

position:2620376:1
position: 2620376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2638591-2638632:1:exon

position:2638591:1
position: 2638591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2638632:1
position: 2638632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2642757-2643037:1:exon

position:2642757:1
position: 2642757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRY
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: SRXX1
alternative label: SRXY1
alternative label: TDF
alternative label: TDY
gene: SRY
gene synonym: SRXX1; SRXY1; TDF; TDY
note: sex determining region Y; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(2654896..2655782)
location: region:2654896-2655782:-1
so has part: feature:2654896-2655782:-1:exon
subclass of: SO_0000010

6736
type: Gene
SIO_000068: ncbigene

11311
type: HGNC
SIO_000068: hgnc

08364
type: HPRD
SIO_000068: hprd

480000
type: OMIM
SIO_000068: omim

position:2654896:-1
position: 2654896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2655782:-1
position: 2655782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2654896-2655782:-1:exon

SRY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: SRXX1
alternative label: SRXY1
alternative label: TDF
alternative label: TDY
gene: SRY
gene synonym: SRXX1; SRXY1; TDF; TDY
product: sex determining region Y
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_003140.2
SIO_010081: SRY
subclass of: SO_0000673
so part of: SRY
location: complement(2654896..2655782)
location: region:2654896-2655782:-1
so has part: feature:2654896-2655782:-1:exon

GI:519666780
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2654896-2655782:-1:exon

SRY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: SRXX1
alternative label: SRXY1
alternative label: TDF
alternative label: TDY
gene: SRY
gene synonym: SRXX1; SRXY1; TDF; TDY
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: sex-determining region Y protein
translation: MQSYASAMLSVFNSDDYSPAVQENIPALRRSSSFLCTESCNSKYQCETGENSKGNVQDRVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYRPRRKAKMLPKNCSLLPADPASVLCSEVQLDNRLYRDDCTKATHSRMEHQLGHLPPINAASSPQQRDRYSHWTKL
SIO_010081: SRY
subclass of: SO_0000673
so part of: SRY
location: complement(2655030..2655644)
location: region:2655030-2655644:-1
so has part: feature:2655030-2655644:-1:exon

NP_003131.1
type: Protein
SIO_000068: ncbiprotein

GI:4507225
type: GI
SIO_000068: ncbigi

CCDS14772.1
type: CCDS
SIO_000068: ccds

position:2655030:-1
position: 2655030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2655644:-1
position: 2655644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2655030-2655644:-1:exon

RNASEH2CP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: AYP1p1
gene: RNASEH2CP1
gene synonym: AYP1p1
note: ribonuclease H2, subunit C pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 2657867..2658437
location: region:2657867-2658437:1
so has part: feature:2657867-2658437:1:exon

386608
type: Gene
SIO_000068: ncbigene

24117
type: HGNC
SIO_000068: hgnc

position:2657867:1
position: 2657867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2658437:1
position: 2658437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2657867-2658437:1:exon

TOMM22P2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: TOMM22P2
note: translocase of outer mitochondrial membrane 22 homolog (yeast) pseudogene 2; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 2696023..2696259
location: region:2696023-2696259:1
so has part: feature:2696023-2696259:1:exon

100499417
type: Gene
SIO_000068: ncbigene

38737
type: HGNC
SIO_000068: hgnc

position:2696023:1
position: 2696023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2696259:1
position: 2696259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2696023-2696259:1:exon

RPS4Y1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: RPS4Y
alternative label: S4
gene: RPS4Y1
gene synonym: RPS4Y; S4
note: ribosomal protein S4, Y-linked 1; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 2709623..2734997
location: region:2709623-2734997:1
so has part: feature:2709623-2734997:1:exon
subclass of: SO_0000010

6192
type: Gene
SIO_000068: ncbigene

10425
type: HGNC
SIO_000068: hgnc

15963
type: HPRD
SIO_000068: hprd

470000
type: OMIM
SIO_000068: omim

position:2709623:1
position: 2709623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2734997:1
position: 2734997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2709623-2734997:1:exon

RPS4Y1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: RPS4Y
alternative label: S4
gene: RPS4Y1
gene synonym: RPS4Y; S4
product: ribosomal protein S4, Y-linked 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001008.3
SIO_010081: RPS4Y1
subclass of: SO_0000673
so part of: RPS4Y1
location: join(2709623..2709668,2710206..2710283,2712118..2712298,2713687..2713784,2722641..2722812,2733129..2733286,2734834..2734997)
location: region:2709623-2734997:1
so has part: feature:2709623-2709668:1:exon
so has part: feature:2710206-2710283:1:exon
so has part: feature:2712118-2712298:1:exon
so has part: feature:2713687-2713784:1:exon
so has part: feature:2722641-2722812:1:exon
so has part: feature:2733129-2733286:1:exon
so has part: feature:2734834-2734997:1:exon

GI:71164879
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2709623-2709668:1:exon

position:2709668:1
position: 2709668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2710206-2710283:1:exon

position:2710206:1
position: 2710206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2710283:1
position: 2710283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2712118-2712298:1:exon

position:2712118:1
position: 2712118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2712298:1
position: 2712298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2713687-2713784:1:exon

position:2713687:1
position: 2713687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2713784:1
position: 2713784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2722641-2722812:1:exon

position:2722641:1
position: 2722641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2722812:1
position: 2722812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2733129-2733286:1:exon

position:2733129:1
position: 2733129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2733286:1
position: 2733286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2734834-2734997:1:exon

position:2734834:1
position: 2734834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPS4Y1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: RPS4Y
alternative label: S4
gene: RPS4Y1
gene synonym: RPS4Y; S4
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: 40S ribosomal protein S4, Y isoform 1
translation: MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLATKQSSG
SIO_010081: RPS4Y1
subclass of: SO_0000673
so part of: RPS4Y1
location: join(2709666..2709668,2710206..2710283,2712118..2712298,2713687..2713784,2722641..2722812,2733129..2733286,2734834..2734935)
location: region:2709666-2734935:1
so has part: feature:2709666-2709668:1:exon
so has part: feature:2710206-2710283:1:exon
so has part: feature:2712118-2712298:1:exon
so has part: feature:2713687-2713784:1:exon
so has part: feature:2722641-2722812:1:exon
so has part: feature:2733129-2733286:1:exon
so has part: feature:2734834-2734935:1:exon

NP_000999.1
type: Protein
SIO_000068: ncbiprotein

GI:4506727
type: GI
SIO_000068: ncbigi

CCDS14773.1
type: CCDS
SIO_000068: ccds

position:2709666:1
position: 2709666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2734935:1
position: 2734935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2709666-2709668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2710206-2710283:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2712118-2712298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2713687-2713784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2722641-2722812:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2733129-2733286:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2734834-2734935:1:exon

RPS4Y1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: RPS4Y
alternative label: S4
gene: RPS4Y1
gene synonym: RPS4Y; S4
product: ribosomal protein S4, Y-linked 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 58 ESTs, 21 Proteins, and 96% coverage by RNAseq alignments
transcript id: XM_005262568.1
SIO_010081: RPS4Y1
subclass of: SO_0000673
so part of: RPS4Y1
location: join(2709937..2710014,2710206..2710283,2712118..2712298,2713687..2713784,2722641..2722812,2733129..2733286,2734834..2734997)
location: region:2709937-2734997:1
so has part: feature:2709937-2710014:1:exon
so has part: feature:2710206-2710283:1:exon
so has part: feature:2712118-2712298:1:exon
so has part: feature:2713687-2713784:1:exon
so has part: feature:2722641-2722812:1:exon
so has part: feature:2733129-2733286:1:exon
so has part: feature:2734834-2734997:1:exon

GI:530426511
type: GI
SIO_000068: ncbigi

position:2709937:1
position: 2709937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2709937-2710014:1:exon

position:2710014:1
position: 2710014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2710206-2710283:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2712118-2712298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2713687-2713784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2722641-2722812:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2733129-2733286:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2734834-2734997:1:exon

RPS4Y1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: RPS4Y
alternative label: S4
gene: RPS4Y1
gene synonym: RPS4Y; S4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S4, Y isoform 1 isoform X1
translation: MLGRPAKFSKARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLATKQSSG
SIO_010081: RPS4Y1
subclass of: SO_0000673
so part of: RPS4Y1
location: join(2709985..2710014,2710206..2710283,2712118..2712298,2713687..2713784,2722641..2722812,2733129..2733286,2734834..2734935)
location: region:2709985-2734935:1
so has part: feature:2709985-2710014:1:exon
so has part: feature:2710206-2710283:1:exon
so has part: feature:2712118-2712298:1:exon
so has part: feature:2713687-2713784:1:exon
so has part: feature:2722641-2722812:1:exon
so has part: feature:2733129-2733286:1:exon
so has part: feature:2734834-2734935:1:exon

XP_005262625.1
type: Protein
SIO_000068: ncbiprotein

GI:530426512
type: GI
SIO_000068: ncbigi

position:2709985:1
position: 2709985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2709985-2710014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2710206-2710283:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2712118-2712298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2713687-2713784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2722641-2722812:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2733129-2733286:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2734834-2734935:1:exon

HSFY3P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: HSFYP2
gene: HSFY3P
gene synonym: HSFYP2
note: heat shock transcription factor, Y-linked 3, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(2749606..2751780)
location: region:2749606-2751780:-1
so has part: feature:2749606-2751780:-1:exon

442479
type: Gene
SIO_000068: ncbigene

37119
type: HGNC
SIO_000068: hgnc

position:2749606:-1
position: 2749606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2751780:-1
position: 2751780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2749606-2751780:-1:exon

HSFY3P
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
alternative label: HSFYP2
gene: HSFY3P
gene synonym: HSFYP2
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: HSFY3P
subclass of: SO_0000673
so part of: HSFY3P
location: complement(2751182..2751780)
location: region:2751182-2751780:-1
so has part: feature:2751182-2751780:-1:exon

position:2751182:-1
position: 2751182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2751182-2751780:-1:exon

NAP1L1P2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: NAP1L1P2
note: nucleosome assembly protein 1-like 1 pseudogene 2; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(2797411..2798404)
location: region:2797411-2798404:-1
so has part: feature:2797411-2798404:-1:exon

100128894
type: Gene
SIO_000068: ncbigene

38005
type: HGNC
SIO_000068: hgnc

position:2797411:-1
position: 2797411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2798404:-1
position: 2798404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2797411-2798404:-1:exon

ZFY
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: ZNF911
gene: ZFY
gene synonym: ZNF911
note: zinc finger protein, Y-linked; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 2803112..2850547
location: region:2803112-2850547:1
so has part: feature:2803112-2850547:1:exon
subclass of: SO_0000010

7544
type: Gene
SIO_000068: ncbigene

12870
type: HGNC
SIO_000068: hgnc

490000
type: OMIM
SIO_000068: omim

position:2803112:1
position: 2803112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2850547:1
position: 2850547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2803112-2850547:1:exon

ZFY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ZNF911
gene: ZFY
gene synonym: ZNF911
product: zinc finger protein, Y-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 8 ESTs, 12 Proteins, and 100% coverage by RNAseq alignments, including 4 samples with support for all introns
transcript id: XM_005262570.1
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(2803112..2803487,2821950..2822038,2829115..2829687,2843136..2843285,2843552..2843695,2844711..2844863,2845981..2846121,2846851..2850547)
location: region:2803112-2850547:1
so has part: feature:2803112-2803487:1:exon
so has part: feature:2821950-2822038:1:exon
so has part: feature:2829115-2829687:1:exon
so has part: feature:2843136-2843285:1:exon
so has part: feature:2843552-2843695:1:exon
so has part: feature:2844711-2844863:1:exon
so has part: feature:2845981-2846121:1:exon
so has part: feature:2846851-2850547:1:exon

GI:530426515
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2803112-2803487:1:exon

position:2803487:1
position: 2803487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2821950-2822038:1:exon

position:2821950:1
position: 2821950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2822038:1
position: 2822038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2829115-2829687:1:exon

position:2829115:1
position: 2829115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2829687:1
position: 2829687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2843136-2843285:1:exon

position:2843136:1
position: 2843136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2843285:1
position: 2843285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2843552-2843695:1:exon

position:2843552:1
position: 2843552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2843695:1
position: 2843695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2844711-2844863:1:exon

position:2844711:1
position: 2844711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2844863:1
position: 2844863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2845981-2846121:1:exon

position:2845981:1
position: 2845981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2846121:1
position: 2846121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2846851-2850547:1:exon

position:2846851:1
position: 2846851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZFY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ZNF911
gene: ZFY
gene synonym: ZNF911
product: zinc finger protein, Y-linked, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 ESTs, 2 Proteins, and 100% coverage by RNAseq alignments, including 3 samples with support for all introns
transcript id: XM_005262571.1
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(2803112..2803487,2821950..2822038,2829115..2829687,2843136..2843285,2843552..2843695,2845981..2846121,2846851..2850547)
location: region:2803112-2850547:1
so has part: feature:2803112-2803487:1:exon
so has part: feature:2821950-2822038:1:exon
so has part: feature:2829115-2829687:1:exon
so has part: feature:2843136-2843285:1:exon
so has part: feature:2843552-2843695:1:exon
so has part: feature:2845981-2846121:1:exon
so has part: feature:2846851-2850547:1:exon

GI:530426517
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2803112-2803487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2821950-2822038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2829115-2829687:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2843136-2843285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2843552-2843695:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2845981-2846121:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2846851-2850547:1:exon

ZFY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ZNF911
gene: ZFY
gene synonym: ZNF911
product: zinc finger protein, Y-linked, transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001145276.1
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(2803112..2803487,2821950..2822038,2843136..2843285,2843552..2843695,2844711..2844863,2845981..2846121,2846851..2850547)
location: region:2803112-2850547:1
so has part: feature:2803112-2803487:1:exon
so has part: feature:2821950-2822038:1:exon
so has part: feature:2843136-2843285:1:exon
so has part: feature:2843552-2843695:1:exon
so has part: feature:2844711-2844863:1:exon
so has part: feature:2845981-2846121:1:exon
so has part: feature:2846851-2850547:1:exon

GI:223717972
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2803112-2803487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2821950-2822038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2843136-2843285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2843552-2843695:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2844711-2844863:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2845981-2846121:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2846851-2850547:1:exon

ZFY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ZNF911
gene: ZFY
gene synonym: ZNF911
product: zinc finger protein, Y-linked, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_003411.3
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(2803518..2803810,2821950..2822038,2829115..2829687,2843136..2843285,2843552..2843695,2844711..2844863,2845981..2846121,2846851..2850547)
location: region:2803518-2850547:1
so has part: feature:2803518-2803810:1:exon
so has part: feature:2821950-2822038:1:exon
so has part: feature:2829115-2829687:1:exon
so has part: feature:2843136-2843285:1:exon
so has part: feature:2843552-2843695:1:exon
so has part: feature:2844711-2844863:1:exon
so has part: feature:2845981-2846121:1:exon
so has part: feature:2846851-2850547:1:exon

GI:223890138
type: GI
SIO_000068: ncbigi

position:2803518:1
position: 2803518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2803518-2803810:1:exon

position:2803810:1
position: 2803810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2821950-2822038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2829115-2829687:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2843136-2843285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2843552-2843695:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2844711-2844863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2845981-2846121:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2846851-2850547:1:exon

ZFY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ZNF911
gene: ZFY
gene synonym: ZNF911
product: zinc finger protein, Y-linked, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001145275.1
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(2803518..2803810,2829115..2829687,2843136..2843285,2843552..2843695,2845981..2846121,2846851..2850547)
location: region:2803518-2850547:1
so has part: feature:2803518-2803810:1:exon
so has part: feature:2829115-2829687:1:exon
so has part: feature:2843136-2843285:1:exon
so has part: feature:2843552-2843695:1:exon
so has part: feature:2845981-2846121:1:exon
so has part: feature:2846851-2850547:1:exon

GI:223717964
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2803518-2803810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2829115-2829687:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2843136-2843285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2843552-2843695:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2845981-2846121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2846851-2850547:1:exon

ZFY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ZNF911
gene: ZFY
gene synonym: ZNF911
note: isoform 1 is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: zinc finger Y-chromosomal protein isoform 1
translation: MDEDEFELQPQEPNSFFDGIGADATHMDGDQIVVEIQEAVFVSNIVDSDITVHNFVPDDPDSVVIQDVVEDVVIEEDVQCSDILEEADVSENVIIPEQVLDSDVTEEVSLPHCTVPDDVLASDITSTSMSMPEHVLTSESMHVCDIGHVEHMVHDSVVEAEIITDPLTSDIVSEEVLVADCAPEAVIDASGISVDQQDNDKASCEDYLMISLDDAGKIEHDGSTGVTIDAESEMDPCKVDSTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSIRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAVHEQQIDEDEMKTFVPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKKRRPDSRQYQTAIIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHLAKKKYHCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELRKHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDTKEVQQHTLVHQESKTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(2821978..2822038,2829115..2829687,2843136..2843285,2843552..2843695,2844711..2844863,2845981..2846121,2846851..2848034)
location: region:2821978-2848034:1
so has part: feature:2821978-2822038:1:exon
so has part: feature:2829115-2829687:1:exon
so has part: feature:2843136-2843285:1:exon
so has part: feature:2843552-2843695:1:exon
so has part: feature:2844711-2844863:1:exon
so has part: feature:2845981-2846121:1:exon
so has part: feature:2846851-2848034:1:exon

NP_003402.2
type: Protein
SIO_000068: ncbiprotein

GI:33239440
type: GI
SIO_000068: ncbigi

CCDS14774.1
type: CCDS
SIO_000068: ccds

position:2821978:1
position: 2821978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2848034:1
position: 2848034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2821978-2822038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2829115-2829687:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2843136-2843285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2843552-2843695:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2844711-2844863:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2845981-2846121:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2846851-2848034:1:exon

ZFY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ZNF911
gene: ZFY
gene synonym: ZNF911
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger Y-chromosomal protein isoform X1
translation: MDEDEFELQPQEPNSFFDGIGADATHMDGDQIVVEIQEAVFVSNIVDSDITVHNFVPDDPDSVVIQDVVEDVVIEEDVQCSDILEEADVSENVIIPEQVLDSDVTEEVSLPHCTVPDDVLASDITSTSMSMPEHVLTSESMHVCDIGHVEHMVHDSVVEAEIITDPLTSDIVSEEVLVADCAPEAVIDASGISVDQQDNDKASCEDYLMISLDDAGKIEHDGSTGVTIDAESEMDPCKVDSTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSIRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAVHEQQIDEDEMKTFVPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKKRRPDSRQYQTAIIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHLAKKKYHCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELRKHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDTKEVQQHTLVHQESKTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(2821978..2822038,2829115..2829687,2843136..2843285,2843552..2843695,2844711..2844863,2845981..2846121,2846851..2848034)
location: region:2821978-2848034:1
so has part: feature:2821978-2822038:1:exon
so has part: feature:2829115-2829687:1:exon
so has part: feature:2843136-2843285:1:exon
so has part: feature:2843552-2843695:1:exon
so has part: feature:2844711-2844863:1:exon
so has part: feature:2845981-2846121:1:exon
so has part: feature:2846851-2848034:1:exon

XP_005262627.1
type: Protein
SIO_000068: ncbiprotein

GI:530426516
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2821978-2822038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2829115-2829687:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2843136-2843285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2843552-2843695:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2844711-2844863:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2845981-2846121:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2846851-2848034:1:exon

ZFY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ZNF911
gene: ZFY
gene synonym: ZNF911
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger Y-chromosomal protein isoform X2
translation: MDEDEFELQPQEPNSFFDGIGADATHMDGDQIVVEIQEAVFVSNIVDSDITVHNFVPDDPDSVVIQDVVEDVVIEEDVQCSDILEEADVSENVIIPEQVLDSDVTEEVSLPHCTVPDDVLASDITSTSMSMPEHVLTSESMHVCDIGHVEHMVHDSVVEAEIITDPLTSDIVSEEVLVADCAPEAVIDASGISVDQQDNDKASCEDYLMISLDDAGKIEHDGSTGVTIDAESEMDPCKVDSTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSIRVPREKMVYMTVNDSQQEDEDLSNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKKRRPDSRQYQTAIIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHLAKKKYHCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELRKHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDTKEVQQHTLVHQESKTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(2821978..2822038,2829115..2829687,2843136..2843285,2843552..2843695,2845981..2846121,2846851..2848034)
location: region:2821978-2848034:1
so has part: feature:2821978-2822038:1:exon
so has part: feature:2829115-2829687:1:exon
so has part: feature:2843136-2843285:1:exon
so has part: feature:2843552-2843695:1:exon
so has part: feature:2845981-2846121:1:exon
so has part: feature:2846851-2848034:1:exon

XP_005262628.1
type: Protein
SIO_000068: ncbiprotein

GI:530426518
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2821978-2822038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2829115-2829687:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2843136-2843285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2843552-2843695:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2845981-2846121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2846851-2848034:1:exon

ZFY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ZNF911
gene: ZFY
gene synonym: ZNF911
note: isoform 3 is encoded by transcript variant 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: zinc finger Y-chromosomal protein isoform 3
translation: MDEDEFELQPQEPNSFFDGIVDDAGKIEHDGSTGVTIDAESEMDPCKVDSTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSIRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAVHEQQIDEDEMKTFVPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKKRRPDSRQYQTAIIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHLAKKKYHCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELRKHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDTKEVQQHTLVHQESKTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(2821978..2822038,2843136..2843285,2843552..2843695,2844711..2844863,2845981..2846121,2846851..2848034)
location: region:2821978-2848034:1
so has part: feature:2821978-2822038:1:exon
so has part: feature:2843136-2843285:1:exon
so has part: feature:2843552-2843695:1:exon
so has part: feature:2844711-2844863:1:exon
so has part: feature:2845981-2846121:1:exon
so has part: feature:2846851-2848034:1:exon

NP_001138748.1
type: Protein
SIO_000068: ncbiprotein

GI:223717973
type: GI
SIO_000068: ncbigi

CCDS48200.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:2821978-2822038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2843136-2843285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2843552-2843695:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2844711-2844863:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2845981-2846121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2846851-2848034:1:exon

ZFY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ZNF911
gene: ZFY
gene synonym: ZNF911
note: isoform 2 is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: zinc finger Y-chromosomal protein isoform 2
translation: MDGDQIVVEIQEAVFVSNIVDSDITVHNFVPDDPDSVVIQDVVEDVVIEEDVQCSDILEEADVSENVIIPEQVLDSDVTEEVSLPHCTVPDDVLASDITSTSMSMPEHVLTSESMHVCDIGHVEHMVHDSVVEAEIITDPLTSDIVSEEVLVADCAPEAVIDASGISVDQQDNDKASCEDYLMISLDDAGKIEHDGSTGVTIDAESEMDPCKVDSTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSIRVPREKMVYMTVNDSQQEDEDLSNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKKRRPDSRQYQTAIIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHLAKKKYHCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELRKHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDTKEVQQHTLVHQESKTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(2829132..2829687,2843136..2843285,2843552..2843695,2845981..2846121,2846851..2848034)
location: region:2829132-2848034:1
so has part: feature:2829132-2829687:1:exon
so has part: feature:2843136-2843285:1:exon
so has part: feature:2843552-2843695:1:exon
so has part: feature:2845981-2846121:1:exon
so has part: feature:2846851-2848034:1:exon

NP_001138747.1
type: Protein
SIO_000068: ncbiprotein

GI:223717965
type: GI
SIO_000068: ncbigi

CCDS48201.1
type: CCDS
SIO_000068: ccds

position:2829132:1
position: 2829132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2829132-2829687:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2843136-2843285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2843552-2843695:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2845981-2846121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2846851-2848034:1:exon

EEF1A1P41
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: EEF1A1P41
note: eukaryotic translation elongation factor 1 alpha 1 pseudogene 41; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(2863108..2863314)
location: region:2863108-2863314:-1
so has part: feature:2863108-2863314:-1:exon

100874491
type: Gene
SIO_000068: ncbigene

38799
type: HGNC
SIO_000068: hgnc

position:2863108:-1
position: 2863108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2863314:-1
position: 2863314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2863108-2863314:-1:exon

LINC00278
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: NCRNA00278
gene: LINC00278
gene synonym: NCRNA00278
note: long intergenic non-protein coding RNA 278; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 2871037..>2970313
location: region:2871037-2970313:1
so has part: feature:2871037-2970313:1:exon

100873962
type: Gene
SIO_000068: ncbigene

38712
type: HGNC
SIO_000068: hgnc

position:2871037:1
position: 2871037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2970313:1
position: 2970313
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2871037-2970313:1:exon

LINC00278
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: NCRNA00278
gene: LINC00278
gene synonym: NCRNA00278
product: long intergenic non-protein coding RNA 278
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_046502.1
SIO_010081: LINC00278
so part of: LINC00278
location: join(2871037..2871258,2947325..2947382,2965036..2965097,2970126..>2970313)
location: region:2871037-2970313:1
so has part: feature:2871037-2871258:1:exon
so has part: feature:2947325-2947382:1:exon
so has part: feature:2965036-2965097:1:exon
so has part: feature:2970126-2970313:1:exon

GI:387527995
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:2871037-2871258:1:exon

position:2871258:1
position: 2871258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2947325-2947382:1:exon

position:2947325:1
position: 2947325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2947382:1
position: 2947382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2965036-2965097:1:exon

position:2965036:1
position: 2965036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2965097:1
position: 2965097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2970126-2970313:1:exon

position:2970126:1
position: 2970126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AGPAT5P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: AGPAT5P1
note: 1-acylglycerol-3-phosphate O-acyltransferase 5 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 3161849..3162850
location: region:3161849-3162850:1
so has part: feature:3161849-3162850:1:exon

646231
type: Gene
SIO_000068: ncbigene

37709
type: HGNC
SIO_000068: hgnc

position:3161849:1
position: 3161849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3162850:1
position: 3162850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3161849-3162850:1:exon

PRRC2CP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: BAT2D1P1
alternative label: BAT2L2P1
gene: PRRC2CP1
gene synonym: BAT2D1P1; BAT2L2P1
note: proline-rich coiled-coil 2C pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 3417854..3418626
location: region:3417854-3418626:1
so has part: feature:3417854-3418626:1:exon

360018
type: Gene
SIO_000068: ncbigene

23949
type: HGNC
SIO_000068: hgnc

position:3417854:1
position: 3417854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3418626:1
position: 3418626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3417854-3418626:1:exon

TGIF2LY
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: TGIFLY
gene: TGIF2LY
gene synonym: TGIFLY
note: TGFB-induced factor homeobox 2-like, Y-linked; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 3447126..3448082
location: region:3447126-3448082:1
so has part: feature:3447126-3448082:1:exon
subclass of: SO_0000010

90655
type: Gene
SIO_000068: ncbigene

18569
type: HGNC
SIO_000068: hgnc

18512
type: HPRD
SIO_000068: hprd

400025
type: OMIM
SIO_000068: omim

position:3447126:1
position: 3447126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3448082:1
position: 3448082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3447126-3448082:1:exon

TGIF2LY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: TGIFLY
gene: TGIF2LY
gene synonym: TGIFLY
product: TGFB-induced factor homeobox 2-like, Y-linked
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_139214.2
SIO_010081: TGIF2LY
subclass of: SO_0000673
so part of: TGIF2LY
location: join(3447126..3447168,3447265..3448082)
location: region:3447126-3448082:1
so has part: feature:3447126-3447168:1:exon
so has part: feature:3447265-3448082:1:exon

GI:34328942
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:3447126-3447168:1:exon

position:3447168:1
position: 3447168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3447265-3448082:1:exon

position:3447265:1
position: 3447265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TGIF2LY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: TGIFLY
gene: TGIF2LY
gene synonym: TGIFLY
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: homeobox protein TGIF2LY
translation: MEAAADGPAETQSPVEKDSPAKTQSPAQDTSIMSRNNADTGRVLALPEHKKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLRISNWFINARRRILPDMLQQRRNDPIIGHKTGKDAHATHLQSTEASVPAKSGPVVQTMYKACPCGPCQRARCQERSNQIRSRPLARSSPE
SIO_010081: TGIF2LY
subclass of: SO_0000673
so part of: TGIF2LY
location: 3447286..3447843
location: region:3447286-3447843:1
so has part: feature:3447286-3447843:1:exon

NP_631960.1
type: Protein
SIO_000068: ncbiprotein

GI:21245108
type: GI
SIO_000068: ncbigi

CCDS14775.1
type: CCDS
SIO_000068: ccds

position:3447286:1
position: 3447286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3447843:1
position: 3447843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3447286-3447843:1:exon

USP12PY
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: USP12P3
gene: USP12PY
gene synonym: USP12P3
note: ubiquitin specific peptidase 12 pseudogene, Y-linked; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 3550599..3552883
location: region:3550599-3552883:1
so has part: feature:3550599-3552883:1:exon

359799
type: Gene
SIO_000068: ncbigene

23195
type: HGNC
SIO_000068: hgnc

position:3550599:1
position: 3550599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3552883:1
position: 3552883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3550599-3552883:1:exon

RNF19BPY
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: RNF19BPY
note: ring finger protein 19B pseudogene, Y-linked; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(3646038..3647587)
location: region:3646038-3647587:-1
so has part: feature:3646038-3647587:-1:exon

100419722
type: Gene
SIO_000068: ncbigene

38398
type: HGNC
SIO_000068: hgnc

position:3646038:-1
position: 3646038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3647587:-1
position: 3647587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3646038-3647587:-1:exon

LOC100533723
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC100533723
note: HERV-FRD provirus ancestral Env polyprotein pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(3719265..3720910)
location: region:3719265-3720910:-1
so has part: feature:3719265-3720910:-1:exon

100533723
type: Gene
SIO_000068: ncbigene

position:3719265:-1
position: 3719265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3720910:-1
position: 3720910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3719265-3720910:-1:exon

UBE2V1P3
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: UBE2V1P3
note: ubiquitin-conjugating enzyme E2 variant 1 pseudogene 3; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(3732650..3734820)
location: region:3732650-3734820:-1
so has part: feature:3732650-3734820:-1:exon

359798
type: Gene
SIO_000068: ncbigene

23983
type: HGNC
SIO_000068: hgnc

position:3732650:-1
position: 3732650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3734820:-1
position: 3734820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3732650-3734820:-1:exon

UBE2V1P3
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: UBE2V1P3
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: UBE2V1P3
subclass of: SO_0000673
so part of: UBE2V1P3
location: complement(3733250..3734820)
location: region:3733250-3734820:-1
so has part: feature:3733250-3734820:-1:exon

position:3733250:-1
position: 3733250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3733250-3734820:-1:exon

SERBP1P2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: SERBP1P2
note: SERPINE1 mRNA binding protein 1 pseudogene 2; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(4669051..4670970)
location: region:4669051-4670970:-1
so has part: feature:4669051-4670970:-1:exon

359996
type: Gene
SIO_000068: ncbigene

23967
type: HGNC
SIO_000068: hgnc

position:4669051:-1
position: 4669051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4670970:-1
position: 4670970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4669051-4670970:-1:exon

PCDH11Y
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: PCDH-PC
alternative label: PCDH22
alternative label: PCDHY
gene: PCDH11Y
gene synonym: PCDH-PC; PCDH22; PCDHY
note: protocadherin 11 Y-linked; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 4868267..5610269
location: region:4868267-5610269:1
so has part: feature:4868267-5610269:1:exon
subclass of: SO_0000010

83259
type: Gene
SIO_000068: ncbigene

15813
type: HGNC
SIO_000068: hgnc

400022
type: OMIM
SIO_000068: omim

position:4868267:1
position: 4868267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5610269:1
position: 5610269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4868267-5610269:1:exon

PCDH11Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: PCDH-PC
alternative label: PCDH22
alternative label: PCDHY
gene: PCDH11Y
gene synonym: PCDH-PC; PCDH22; PCDHY
product: protocadherin 11 Y-linked, transcript variant d
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001278619.1
SIO_010081: PCDH11Y
subclass of: SO_0000673
so part of: PCDH11Y
location: join(4868267..4868646,4898940..4899108,4899947..4900052,4900711..4900769,4924930..4925500,4966256..4968748,4972385..4973639)
location: region:4868267-4973639:1
so has part: feature:4868267-4868646:1:exon
so has part: feature:4898940-4899108:1:exon
so has part: feature:4899947-4900052:1:exon
so has part: feature:4900711-4900769:1:exon
so has part: feature:4924930-4925500:1:exon
so has part: feature:4966256-4968748:1:exon
so has part: feature:4972385-4973639:1:exon

GI:519666810
type: GI
SIO_000068: ncbigi

position:4973639:1
position: 4973639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4868267-4868646:1:exon

position:4868646:1
position: 4868646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4898940-4899108:1:exon

position:4898940:1
position: 4898940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4899108:1
position: 4899108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4899947-4900052:1:exon

position:4899947:1
position: 4899947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4900052:1
position: 4900052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4900711-4900769:1:exon

position:4900711:1
position: 4900711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4900769:1
position: 4900769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4924930-4925500:1:exon

position:4924930:1
position: 4924930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4925500:1
position: 4925500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4966256-4968748:1:exon

position:4966256:1
position: 4966256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4968748:1
position: 4968748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4972385-4973639:1:exon

position:4972385:1
position: 4972385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH11Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: PCDH-PC
alternative label: PCDH22
alternative label: PCDHY
gene: PCDH11Y
gene synonym: PCDH-PC; PCDH22; PCDHY
product: protocadherin 11 Y-linked, transcript variant a
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_032971.2
SIO_010081: PCDH11Y
subclass of: SO_0000673
so part of: PCDH11Y
location: join(4868267..4868646,4899947..4900052,4900711..4900769,4924930..4925500,4966256..4968748,4972385..4973639)
location: region:4868267-4973639:1
so has part: feature:4868267-4868646:1:exon
so has part: feature:4899947-4900052:1:exon
so has part: feature:4900711-4900769:1:exon
so has part: feature:4924930-4925500:1:exon
so has part: feature:4966256-4968748:1:exon
so has part: feature:4972385-4973639:1:exon

GI:519666807
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:4868267-4868646:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4899947-4900052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4900711-4900769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4924930-4925500:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4966256-4968748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4972385-4973639:1:exon

PCDH11Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: PCDH-PC
alternative label: PCDH22
alternative label: PCDHY
gene: PCDH11Y
gene synonym: PCDH-PC; PCDH22; PCDHY
note: isoform a is encoded by transcript variant a; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: protocadherin-11 Y-linked isoform a
translation: MTVGFNSDISSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNYTIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMKKKKKKKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDSPDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDPYSVSDCGYPVTTFEVPVSVHTRPTDSRT
SIO_010081: PCDH11Y
subclass of: SO_0000673
so part of: PCDH11Y
location: join(4900738..4900769,4924930..4925500,4966256..4968748,4972385..4972402)
location: region:4900738-4972402:1
so has part: feature:4900738-4900769:1:exon
so has part: feature:4924930-4925500:1:exon
so has part: feature:4966256-4968748:1:exon
so has part: feature:4972385-4972402:1:exon

NP_116753.1
type: Protein
SIO_000068: ncbiprotein

GI:14589942
type: GI
SIO_000068: ncbigi

CCDS14776.1
type: CCDS
SIO_000068: ccds

position:4900738:1
position: 4900738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4972402:1
position: 4972402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4900738-4900769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4924930-4925500:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4966256-4968748:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4972385-4972402:1:exon

PCDH11Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: PCDH-PC
alternative label: PCDH22
alternative label: PCDHY
gene: PCDH11Y
gene synonym: PCDH-PC; PCDH22; PCDHY
note: isoform a is encoded by transcript variant d; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: protocadherin-11 Y-linked isoform a
translation: MTVGFNSDISSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNYTIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMKKKKKKKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDSPDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDPYSVSDCGYPVTTFEVPVSVHTRPTDSRT
SIO_010081: PCDH11Y
subclass of: SO_0000673
so part of: PCDH11Y
location: join(4900738..4900769,4924930..4925500,4966256..4968748,4972385..4972402)
location: region:4900738-4972402:1
so has part: feature:4900738-4900769:1:exon
so has part: feature:4924930-4925500:1:exon
so has part: feature:4966256-4968748:1:exon
so has part: feature:4972385-4972402:1:exon

NP_001265548.1
type: Protein
SIO_000068: ncbiprotein

GI:519666811
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:4900738-4900769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4924930-4925500:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4966256-4968748:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4972385-4972402:1:exon

PCDH11Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: PCDH-PC
alternative label: PCDH22
alternative label: PCDHY
gene: PCDH11Y
gene synonym: PCDH-PC; PCDH22; PCDHY
product: protocadherin 11 Y-linked, transcript variant c
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_032973.2
SIO_010081: PCDH11Y
subclass of: SO_0000673
so part of: PCDH11Y
location: join(4924131..4925500,4966256..4968748,5369098..5369296,5449816..5449839,5605313..5610269)
location: region:4924131-5610269:1
so has part: feature:4924131-4925500:1:exon
so has part: feature:4966256-4968748:1:exon
so has part: feature:5369098-5369296:1:exon
so has part: feature:5449816-5449839:1:exon
so has part: feature:5605313-5610269:1:exon

GI:519666809
type: GI
SIO_000068: ncbigi

position:4924131:1
position: 4924131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4924131-4925500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4966256-4968748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5369098-5369296:1:exon

position:5369098:1
position: 5369098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5369296:1
position: 5369296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5449816-5449839:1:exon

position:5449816:1
position: 5449816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5449839:1
position: 5449839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5605313-5610269:1:exon

position:5605313:1
position: 5605313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH11Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: PCDH-PC
alternative label: PCDH22
alternative label: PCDHY
gene: PCDH11Y
gene synonym: PCDH-PC; PCDH22; PCDHY
product: protocadherin 11 Y-linked, transcript variant b
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_032972.2
SIO_010081: PCDH11Y
subclass of: SO_0000673
so part of: PCDH11Y
location: join(4924131..4925500,4966256..4968748,4972385..4973639)
location: region:4924131-4973639:1
so has part: feature:4924131-4925500:1:exon
so has part: feature:4966256-4968748:1:exon
so has part: feature:4972385-4973639:1:exon

GI:519666808
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:4924131-4925500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4966256-4968748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4972385-4973639:1:exon

PCDH11Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: PCDH-PC
alternative label: PCDH22
alternative label: PCDHY
gene: PCDH11Y
gene synonym: PCDH-PC; PCDH22; PCDHY
note: isoform c precursor is encoded by transcript variant c; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: protocadherin-11 Y-linked isoform c precursor
translation: MFRVGFLIISSSSSLSPLLLVSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNYTIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMKKKKKKKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDSPDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDPYSVSDCGYPVTTFEVPVSVHTRPSQRRVTFHLPEGSQESSSDGGLGDHDAGSLTSTSHGLPLGYPQEEYFDRATPSNRTEGDGNSDPESTFIPGLKKEITVQPTVEEASDNCTQECLIYGHSDACWMPASLDHSSSSQAQASALCHSPPLSQASTQHHSPPVTQTIVLCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQGTALHHSPPSAQASALCYSPPLAQAAAISHSSSLPQVIALHRSQAQSSVSLQQGWVQGANGLCSVDQGVQGSATSQFYTMSERLHPSDDSIKVIPLTTFAPRQQARPSRGDSPIMETHPL
SIO_010081: PCDH11Y
subclass of: SO_0000673
so part of: PCDH11Y
location: join(4924865..4925500,4966256..4968748,5369098..5369296,5449816..5449839,5605313..5605983)
location: region:4924865-5605983:1
so has part: feature:4924865-4925500:1:exon
so has part: feature:4966256-4968748:1:exon
so has part: feature:5369098-5369296:1:exon
so has part: feature:5449816-5449839:1:exon
so has part: feature:5605313-5605983:1:exon

NP_116755.1
type: Protein
SIO_000068: ncbiprotein

GI:14589946
type: GI
SIO_000068: ncbigi

position:4924865:1
position: 4924865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5605983:1
position: 5605983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4924865-4925500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4966256-4968748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5369098-5369296:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5449816-5449839:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5605313-5605983:1:exon

PCDH11Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: PCDH-PC
alternative label: PCDH22
alternative label: PCDHY
gene: PCDH11Y
gene synonym: PCDH-PC; PCDH22; PCDHY
note: isoform b precursor is encoded by transcript variant b; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: protocadherin-11 Y-linked isoform b precursor
translation: MFRVGFLIISSSSSLSPLLLVSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNYTIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMKKKKKKKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDSPDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDPYSVSDCGYPVTTFEVPVSVHTRPTDSRT
SIO_010081: PCDH11Y
subclass of: SO_0000673
so part of: PCDH11Y
location: join(4924865..4925500,4966256..4968748,4972385..4972402)
location: region:4924865-4972402:1
so has part: feature:4924865-4925500:1:exon
so has part: feature:4966256-4968748:1:exon
so has part: feature:4972385-4972402:1:exon

NP_116754.1
type: Protein
SIO_000068: ncbiprotein

GI:14589944
type: GI
SIO_000068: ncbigi

CCDS14777.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:4924865-4925500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4966256-4968748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4972385-4972402:1:exon

VDAC1P6
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: VDAC1P6
note: voltage-dependent anion channel 1 pseudogene 6; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(5074408..5076119)
location: region:5074408-5076119:-1
so has part: feature:5074408-5076119:-1:exon

359800
type: Gene
SIO_000068: ncbigene

37481
type: HGNC
SIO_000068: hgnc

position:5074408:-1
position: 5074408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5076119:-1
position: 5076119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5074408-5076119:-1:exon

VDAC1P6
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: VDAC1P6
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: VDAC1P6
subclass of: SO_0000673
so part of: VDAC1P6
location: complement(5074408..5076119)
location: region:5074408-5076119:-1
so has part: feature:5074408-5076119:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5074408-5076119:-1:exon

EIF4A1P2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: EIF4A1P2
note: eukaryotic translation initiation factor 4A1 pseudogene 2; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(5205644..5207021)
location: region:5205644-5207021:-1
so has part: feature:5205644-5207021:-1:exon

359792
type: Gene
SIO_000068: ncbigene

23946
type: HGNC
SIO_000068: hgnc

position:5205644:-1
position: 5205644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5207021:-1
position: 5207021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5205644-5207021:-1:exon

EIF4A1P2
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: EIF4A1P2
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: EIF4A1P2
subclass of: SO_0000673
so part of: EIF4A1P2
location: complement(5205644..5207021)
location: region:5205644-5207021:-1
so has part: feature:5205644-5207021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5205644-5207021:-1:exon

LOC101928634
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC101928634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5205655..5224283
location: region:5205655-5224283:1
so has part: feature:5205655-5224283:1:exon

101928634
type: Gene
SIO_000068: ncbigene

position:5205655:1
position: 5205655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5224283:1
position: 5224283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5205655-5224283:1:exon

LOC101928634
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC101928634
product: uncharacterized LOC101928634
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage by RNAseq alignments, including 4 samples with support for all introns
transcript id: XR_244579.1
SIO_010081: LOC101928634
so part of: LOC101928634
location: join(5205655..5205691,5209790..5209791,5224273..5224283)
location: region:5205655-5224283:1
so has part: feature:5205655-5205691:1:exon
so has part: feature:5209790-5209791:1:exon
so has part: feature:5224273-5224283:1:exon

GI:530426523
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:5205655-5205691:1:exon

position:5205691:1
position: 5205691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5209790-5209791:1:exon

position:5209790:1
position: 5209790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5209791:1
position: 5209791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5224273-5224283:1:exon

position:5224273:1
position: 5224273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KRT18P10
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: KRT18P10
note: keratin 18 pseudogene 10; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 5441130..5442529
location: region:5441130-5442529:1
so has part: feature:5441130-5442529:1:exon

360019
type: Gene
SIO_000068: ncbigene

23962
type: HGNC
SIO_000068: hgnc

position:5441130:1
position: 5441130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5442529:1
position: 5442529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5441130-5442529:1:exon

KRT18P10
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: KRT18P10
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: KRT18P10
subclass of: SO_0000673
so part of: KRT18P10
location: 5441130..5442529
location: region:5441130-5442529:1
so has part: feature:5441130-5442529:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5441130-5442529:1:exon

SNX3P1Y
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: SNX3P1Y
note: sorting nexin 3 pseudogene 1, Y-linked; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(5502525..5502696)
location: region:5502525-5502696:-1
so has part: feature:5502525-5502696:-1:exon

100873885
type: Gene
SIO_000068: ncbigene

41517
type: HGNC
SIO_000068: hgnc

position:5502525:-1
position: 5502525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5502696:-1
position: 5502696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5502525-5502696:-1:exon

RPL26P37
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: RPL26_17_1822
gene: RPL26P37
gene synonym: RPL26_17_1822
note: ribosomal protein L26 pseudogene 37; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(5661298..5661876)
location: region:5661298-5661876:-1
so has part: feature:5661298-5661876:-1:exon

441533
type: Gene
SIO_000068: ncbigene

36004
type: HGNC
SIO_000068: hgnc

position:5661298:-1
position: 5661298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5661876:-1
position: 5661876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5661298-5661876:-1:exon

RPL26P37
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
alternative label: RPL26_17_1822
gene: RPL26P37
gene synonym: RPL26_17_1822
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: RPL26P37
subclass of: SO_0000673
so part of: RPL26P37
location: complement(5661298..5661876)
location: region:5661298-5661876:-1
so has part: feature:5661298-5661876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5661298-5661876:-1:exon

TUSC2P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: TUSC2P
gene: TUSC2P1
gene synonym: TUSC2P
note: tumor suppressor candidate 2 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 5755552..5756782
location: region:5755552-5756782:1
so has part: feature:5755552-5756782:1:exon

359794
type: Gene
SIO_000068: ncbigene

23963
type: HGNC
SIO_000068: hgnc

position:5755552:1
position: 5755552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5756782:1
position: 5756782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5755552-5756782:1:exon

DLGAP5P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: DLGAP5P1
note: discs, large (Drosophila) homolog-associated protein 5 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 6026839..6027874
location: region:6026839-6027874:1
so has part: feature:6026839-6027874:1:exon

360014
type: Gene
SIO_000068: ncbigene

23945
type: HGNC
SIO_000068: hgnc

position:6026839:1
position: 6026839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6027874:1
position: 6027874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6026839-6027874:1:exon

TTTY23B
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: TTTY23B
note: testis-specific transcript, Y-linked 23B (non-protein coding); Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(6110465..6111651)
location: region:6110465-6111651:-1
so has part: feature:6110465-6111651:-1:exon

100101121
type: Gene
SIO_000068: ncbigene

37983
type: HGNC
SIO_000068: hgnc

position:6110465:-1
position: 6110465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6111651:-1
position: 6111651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6110465-6111651:-1:exon

TTTY23B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: TTTY23B
product: testis-specific transcript, Y-linked 23B (non-protein coding), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage by RNAseq alignments, including 2 samples with support for all introns
transcript id: XR_244578.1
SIO_010081: TTTY23B
so part of: TTTY23B
location: complement(join(6110465..6110562,6110743..6110795,6111336..6111353))
location: region:6110465-6111353:-1
so has part: feature:6111336-6111353:-1:exon
so has part: feature:6110743-6110795:-1:exon
so has part: feature:6110465-6110562:-1:exon

GI:530426510
type: GI
SIO_000068: ncbigi

position:6111353:-1
position: 6111353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6111336-6111353:-1:exon

position:6111336:-1
position: 6111336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6110743-6110795:-1:exon

position:6110743:-1
position: 6110743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6110795:-1
position: 6110795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6110465-6110562:-1:exon

position:6110562:-1
position: 6110562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TTTY23B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: TTTY23B
product: testis-specific transcript, Y-linked 23B (non-protein coding)
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_003593.1
SIO_010081: TTTY23B
so part of: TTTY23B
location: complement(join(6110487..6110795,6111336..6111481,6111595..6111651))
location: region:6110487-6111651:-1
so has part: feature:6111595-6111651:-1:exon
so has part: feature:6111336-6111481:-1:exon
so has part: feature:6110487-6110795:-1:exon

GI:149944751
type: GI
SIO_000068: ncbigi

position:6110487:-1
position: 6110487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6111595-6111651:-1:exon

position:6111595:-1
position: 6111595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6111336-6111481:-1:exon

position:6111481:-1
position: 6111481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6110487-6110795:-1:exon

TSPY2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: TSPYQ1
gene: TSPY2
gene synonym: TSPYQ1
note: testis specific protein, Y-linked 2; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 6114264..6117055
location: region:6114264-6117055:1
so has part: feature:6114264-6117055:1:exon
subclass of: SO_0000010

64591
type: Gene
SIO_000068: ncbigene

23924
type: HGNC
SIO_000068: hgnc

position:6114264:1
position: 6114264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6117055:1
position: 6117055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6114264-6117055:1:exon

TSPY2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: TSPYQ1
gene: TSPY2
gene synonym: TSPYQ1
product: testis specific protein, Y-linked 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_022573.2
SIO_010081: TSPY2
subclass of: SO_0000673
so part of: TSPY2
location: join(6114264..6114795,6115397..6115474,6115603..6115714,6115816..6115961,6116068..6116149,6116844..6117053)
location: region:6114264-6117053:1
so has part: feature:6114264-6114795:1:exon
so has part: feature:6115397-6115474:1:exon
so has part: feature:6115603-6115714:1:exon
so has part: feature:6115816-6115961:1:exon
so has part: feature:6116068-6116149:1:exon
so has part: feature:6116844-6117053:1:exon

GI:118918416
type: GI
SIO_000068: ncbigi

position:6117053:1
position: 6117053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6114264-6114795:1:exon

position:6114795:1
position: 6114795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6115397-6115474:1:exon

position:6115397:1
position: 6115397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6115474:1
position: 6115474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6115603-6115714:1:exon

position:6115603:1
position: 6115603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6115714:1
position: 6115714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6115816-6115961:1:exon

position:6115816:1
position: 6115816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6115961:1
position: 6115961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6116068-6116149:1:exon

position:6116068:1
position: 6116068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6116149:1
position: 6116149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6116844-6117053:1:exon

position:6116844:1
position: 6116844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPY2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: TSPYQ1
gene: TSPY2
gene synonym: TSPYQ1
product: testis specific protein, Y-linked 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage by RNAseq alignments, including 3 samples with support for all introns
transcript id: XM_005262569.1
SIO_010081: TSPY2
subclass of: SO_0000673
so part of: TSPY2
location: join(6114302..6114795,6115397..6115474,6115603..6115714,6115816..6115961,6116057..6116149,6116844..6117055)
location: region:6114302-6117055:1
so has part: feature:6114302-6114795:1:exon
so has part: feature:6115397-6115474:1:exon
so has part: feature:6115603-6115714:1:exon
so has part: feature:6115816-6115961:1:exon
so has part: feature:6116057-6116149:1:exon
so has part: feature:6116844-6117055:1:exon

GI:530426513
type: GI
SIO_000068: ncbigi

position:6114302:1
position: 6114302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6114302-6114795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6115397-6115474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6115603-6115714:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6115816-6115961:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6116057-6116149:1:exon

position:6116057:1
position: 6116057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6116844-6117055:1:exon

TSPY2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: TSPYQ1
gene: TSPY2
gene synonym: TSPYQ1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: testis-specific Y-encoded protein 2
translation: MRPEGSLTYRVPERLRQGSCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHRVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS
SIO_010081: TSPY2
subclass of: SO_0000673
so part of: TSPY2
location: join(6114310..6114795,6115397..6115474,6115603..6115714,6115816..6115961,6116068..6116149,6116844..6116866)
location: region:6114310-6116866:1
so has part: feature:6114310-6114795:1:exon
so has part: feature:6115397-6115474:1:exon
so has part: feature:6115603-6115714:1:exon
so has part: feature:6115816-6115961:1:exon
so has part: feature:6116068-6116149:1:exon
so has part: feature:6116844-6116866:1:exon

NP_072095.2
type: Protein
SIO_000068: ncbiprotein

GI:118918417
type: GI
SIO_000068: ncbigi

CCDS35465.1
type: CCDS
SIO_000068: ccds

position:6114310:1
position: 6114310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6116866:1
position: 6116866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6114310-6114795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6115397-6115474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6115603-6115714:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6115816-6115961:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6116068-6116149:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6116844-6116866:1:exon

TSPY2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: TSPYQ1
gene: TSPY2
gene synonym: TSPYQ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 2 isoform X1
translation: MRPEGSLTYRVPERLRQGSCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHRVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAESPDRSYVRTCGAIPCNTTRG
SIO_010081: TSPY2
subclass of: SO_0000673
so part of: TSPY2
location: join(6114310..6114795,6115397..6115474,6115603..6115714,6115816..6115961,6116057..6116119)
location: region:6114310-6116119:1
so has part: feature:6114310-6114795:1:exon
so has part: feature:6115397-6115474:1:exon
so has part: feature:6115603-6115714:1:exon
so has part: feature:6115816-6115961:1:exon
so has part: feature:6116057-6116119:1:exon

XP_005262626.1
type: Protein
SIO_000068: ncbiprotein

GI:530426514
type: GI
SIO_000068: ncbigi

position:6116119:1
position: 6116119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6114310-6114795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6115397-6115474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6115603-6115714:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6115816-6115961:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6116057-6116119:1:exon

TSPY11P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: TSPYP1
gene: TSPY11P
gene synonym: TSPYP1
note: testis specific protein, Y-linked 11, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 6134588..6137316
location: region:6134588-6137316:1
so has part: feature:6134588-6137316:1:exon

347584
type: Gene
SIO_000068: ncbigene

23903
type: HGNC
SIO_000068: hgnc

position:6134588:1
position: 6134588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6137316:1
position: 6137316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6134588-6137316:1:exon

TSPY11P
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
alternative label: TSPYP1
gene: TSPY11P
gene synonym: TSPYP1
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: TSPY11P
subclass of: SO_0000673
so part of: TSPY11P
location: 6134588..6135110
location: region:6134588-6135110:1
so has part: feature:6134588-6135110:1:exon

position:6135110:1
position: 6135110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6134588-6135110:1:exon

TSPY19P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: TSPY19P
note: testis specific protein, Y-linked 19, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(6172343..6173390)
location: region:6172343-6173390:-1
so has part: feature:6172343-6173390:-1:exon

100132504
type: Gene
SIO_000068: ncbigene

37998
type: HGNC
SIO_000068: hgnc

position:6172343:-1
position: 6172343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6173390:-1
position: 6173390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6172343-6173390:-1:exon

RBMY2GP
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: RBMY2GP
note: RNA binding motif protein, Y-linked, family 2, member G pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 6196230..6211625
location: region:6196230-6211625:1
so has part: feature:6196230-6211625:1:exon

378952
type: Gene
SIO_000068: ncbigene

23892
type: HGNC
SIO_000068: hgnc

position:6196230:1
position: 6196230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6211625:1
position: 6211625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6196230-6211625:1:exon

TTTY1B
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: TTTY1B
note: testis-specific transcript, Y-linked 1B (non-protein coding); Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 6258442..6279605
location: region:6258442-6279605:1
so has part: feature:6258442-6279605:1:exon

100101116
type: Gene
SIO_000068: ncbigene

37981
type: HGNC
SIO_000068: hgnc

position:6258442:1
position: 6258442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6279605:1
position: 6279605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6258442-6279605:1:exon

TTTY1B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: TTTY1B
product: testis-specific transcript, Y-linked 1B (non-protein coding)
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_003589.1
SIO_010081: TTTY1B
so part of: TTTY1B
location: join(6258442..6258716,6262141..6262300,6269164..6269272,6271629..6271766,6279348..6279605)
location: region:6258442-6279605:1
so has part: feature:6258442-6258716:1:exon
so has part: feature:6262141-6262300:1:exon
so has part: feature:6269164-6269272:1:exon
so has part: feature:6271629-6271766:1:exon
so has part: feature:6279348-6279605:1:exon

GI:149944677
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:6258442-6258716:1:exon

position:6258716:1
position: 6258716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6262141-6262300:1:exon

position:6262141:1
position: 6262141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6262300:1
position: 6262300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6269164-6269272:1:exon

position:6269164:1
position: 6269164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6269272:1
position: 6269272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6271629-6271766:1:exon

position:6271629:1
position: 6271629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6271766:1
position: 6271766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6279348-6279605:1:exon

position:6279348:1
position: 6279348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTTY2B
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: TTTY2B
note: testis-specific transcript, Y-linked 2B (non-protein coding); Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(6274285..6296485)
location: region:6274285-6296485:-1
so has part: feature:6274285-6296485:-1:exon

100101117
type: Gene
SIO_000068: ncbigene

37982
type: HGNC
SIO_000068: hgnc

position:6274285:-1
position: 6274285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6296485:-1
position: 6296485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6274285-6296485:-1:exon

TTTY2B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: TTTY2B
product: testis-specific transcript, Y-linked 2B (non-protein coding)
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_003590.1
SIO_010081: TTTY2B
so part of: TTTY2B
location: complement(join(6274285..6274964,6276188..6276385,6276506..6276584,6279415..6279571,6280264..6280412,6287806..6287892,6290369..6290446,6296281..6296485))
location: region:6274285-6296485:-1
so has part: feature:6296281-6296485:-1:exon
so has part: feature:6290369-6290446:-1:exon
so has part: feature:6287806-6287892:-1:exon
so has part: feature:6280264-6280412:-1:exon
so has part: feature:6279415-6279571:-1:exon
so has part: feature:6276506-6276584:-1:exon
so has part: feature:6276188-6276385:-1:exon
so has part: feature:6274285-6274964:-1:exon

GI:149944416
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:6296281-6296485:-1:exon

position:6296281:-1
position: 6296281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6290369-6290446:-1:exon

position:6290369:-1
position: 6290369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6290446:-1
position: 6290446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6287806-6287892:-1:exon

position:6287806:-1
position: 6287806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6287892:-1
position: 6287892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6280264-6280412:-1:exon

position:6280264:-1
position: 6280264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6280412:-1
position: 6280412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6279415-6279571:-1:exon

position:6279415:-1
position: 6279415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6279571:-1
position: 6279571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6276506-6276584:-1:exon

position:6276506:-1
position: 6276506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6276584:-1
position: 6276584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6276188-6276385:-1:exon

position:6276188:-1
position: 6276188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6276385:-1
position: 6276385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6274285-6274964:-1:exon

position:6274964:-1
position: 6274964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TTTY2B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: TTTY2B
product: testis-specific transcript, Y-linked 2B (non-protein coding), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage by RNAseq alignments, including 1 sample with support for all introns
transcript id: XR_244577.1
SIO_010081: TTTY2B
so part of: TTTY2B
location: complement(join(6280241..6280412,6290369..6290446,6296281..6296463))
location: region:6280241-6296463:-1
so has part: feature:6296281-6296463:-1:exon
so has part: feature:6290369-6290446:-1:exon
so has part: feature:6280241-6280412:-1:exon

GI:530426509
type: GI
SIO_000068: ncbigi

position:6280241:-1
position: 6280241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6296463:-1
position: 6296463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6296281-6296463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6290369-6290446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6280241-6280412:-1:exon

TTTY21B
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: TTTY21B
note: testis-specific transcript, Y-linked 21B (non-protein coding); Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 6311475..6315118
location: region:6311475-6315118:1
so has part: feature:6311475-6315118:1:exon

100101115
type: Gene
SIO_000068: ncbigene

37980
type: HGNC
SIO_000068: hgnc

position:6311475:1
position: 6311475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6315118:1
position: 6315118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6311475-6315118:1:exon

TTTY21B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: TTTY21B
product: testis-specific transcript, Y-linked 21B (non-protein coding)
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_003588.1
SIO_010081: TTTY21B
so part of: TTTY21B
location: join(6311475..6311676,6315014..6315118)
location: region:6311475-6315118:1
so has part: feature:6311475-6311676:1:exon
so has part: feature:6315014-6315118:1:exon

GI:149944479
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:6311475-6311676:1:exon

position:6311676:1
position: 6311676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6315014-6315118:1:exon

position:6315014:1
position: 6315014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTTY7
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CLONE795723
alternative label: LINC00129
alternative label: NCRNA00129
alternative label: TTTY7A
alternative label: TTTY7B
alternative label: TTY7
gene: TTTY7
gene synonym: CLONE795723; LINC00129; NCRNA00129; TTTY7A; TTTY7B; TTY7
note: testis-specific transcript, Y-linked 7 (non-protein coding); Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 6317509..>6325947
location: region:6317509-6325947:1
so has part: feature:6317509-6325947:1:exon

246122
type: Gene
SIO_000068: ncbigene

18488
type: HGNC
SIO_000068: hgnc

position:6317509:1
position: 6317509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6325947:1
position: 6325947
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6317509-6325947:1:exon

TTTY7
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: CLONE795723
alternative label: LINC00129
alternative label: NCRNA00129
alternative label: TTTY7A
alternative label: TTTY7B
alternative label: TTY7
gene: TTTY7
gene synonym: CLONE795723; LINC00129; NCRNA00129; TTTY7A; TTTY7B; TTY7
product: testis-specific transcript, Y-linked 7 (non-protein coding)
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_001534.2
SIO_010081: TTTY7
so part of: TTTY7
location: join(6317509..6317545,6318487..6318648,6320956..6321030,6321719..6322195,6324113..6324226,6325200..6325455,6325702..>6325947)
location: region:6317509-6325947:1
so has part: feature:6317509-6317545:1:exon
so has part: feature:6318487-6318648:1:exon
so has part: feature:6320956-6321030:1:exon
so has part: feature:6321719-6322195:1:exon
so has part: feature:6324113-6324226:1:exon
so has part: feature:6325200-6325455:1:exon
so has part: feature:6325702-6325947:1:exon

GI:149944646
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:6317509-6317545:1:exon

position:6317545:1
position: 6317545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6318487-6318648:1:exon

position:6318487:1
position: 6318487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6318648:1
position: 6318648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6320956-6321030:1:exon

position:6320956:1
position: 6320956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6321030:1
position: 6321030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6321719-6322195:1:exon

position:6321719:1
position: 6321719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6322195:1
position: 6322195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6324113-6324226:1:exon

position:6324113:1
position: 6324113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6324226:1
position: 6324226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6325200-6325455:1:exon

position:6325200:1
position: 6325200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6325455:1
position: 6325455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6325702-6325947:1:exon

position:6325702:1
position: 6325702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTTY8B
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: NCRNA00217
gene: TTTY8B
gene synonym: NCRNA00217
note: testis-specific transcript, Y-linked 8B (non-protein coding); Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(<6339072..6341671)
location: region:6339072-6341671:-1
so has part: feature:6339072-6341671:-1:exon

100101118
type: Gene
SIO_000068: ncbigene

37622
type: HGNC
SIO_000068: hgnc

position:6339072:-1
position: 6339072
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:6341671:-1
position: 6341671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6339072-6341671:-1:exon

TTTY8B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: NCRNA00217
gene: TTTY8B
gene synonym: NCRNA00217
product: testis-specific transcript, Y-linked 8B (non-protein coding)
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_003591.1
SIO_010081: TTTY8B
so part of: TTTY8B
location: complement(join(<6339072..6339261,6340854..6341058,6341536..6341671))
location: region:6339072-6341671:-1
so has part: feature:6341536-6341671:-1:exon
so has part: feature:6340854-6341058:-1:exon
so has part: feature:6339072-6339261:-1:exon

GI:149944533
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:6341536-6341671:-1:exon

position:6341536:-1
position: 6341536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6340854-6341058:-1:exon

position:6340854:-1
position: 6340854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6341058:-1
position: 6341058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6339072-6339261:-1:exon

position:6339261:-1
position: 6339261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSPY17P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: TSPY17P
note: testis specific protein, Y-linked 17, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 6388459..6388970
location: region:6388459-6388970:1
so has part: feature:6388459-6388970:1:exon

100132124
type: Gene
SIO_000068: ncbigene

37713
type: HGNC
SIO_000068: hgnc

position:6388459:1
position: 6388459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6388970:1
position: 6388970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6388459-6388970:1:exon

SRIP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: SRIP3
note: sorcin pseudogene 3; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(6586991..6587221)
location: region:6586991-6587221:-1
so has part: feature:6586991-6587221:-1:exon

100861435
type: Gene
SIO_000068: ncbigene

38735
type: HGNC
SIO_000068: hgnc

position:6586991:-1
position: 6586991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6587221:-1
position: 6587221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6586991-6587221:-1:exon

GOT2P5
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: GOT2Y
gene: GOT2P5
gene synonym: GOT2Y
note: glutamic-oxaloacetic transaminase 2 pseudogene 5; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 6705740..6706293
location: region:6705740-6706293:1
so has part: feature:6705740-6706293:1:exon

100422625
type: Gene
SIO_000068: ncbigene

38439
type: HGNC
SIO_000068: hgnc

position:6705740:1
position: 6705740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6706293:1
position: 6706293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6705740-6706293:1:exon

AMELY
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: AMGL
alternative label: AMGY
gene: AMELY
gene synonym: AMGL; AMGY
note: amelogenin, Y-linked; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(6733959..6742068)
location: region:6733959-6742068:-1
so has part: feature:6733959-6742068:-1:exon
subclass of: SO_0000010

266
type: Gene
SIO_000068: ncbigene

462
type: HGNC
SIO_000068: hgnc

02462
type: HPRD
SIO_000068: hprd

410000
type: OMIM
SIO_000068: omim

position:6733959:-1
position: 6733959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6742068:-1
position: 6742068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6733959-6742068:-1:exon

AMELY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: AMGL
alternative label: AMGY
gene: AMELY
gene synonym: AMGL; AMGY
product: amelogenin, Y-linked
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001143.1
SIO_010081: AMELY
subclass of: SO_0000673
so part of: AMELY
location: complement(join(6733959..6734119,6736078..6736503,6736773..6736817,6738047..6738094,6740596..6740661,6742013..6742068))
location: region:6733959-6742068:-1
so has part: feature:6742013-6742068:-1:exon
so has part: feature:6740596-6740661:-1:exon
so has part: feature:6738047-6738094:-1:exon
so has part: feature:6736773-6736817:-1:exon
so has part: feature:6736078-6736503:-1:exon
so has part: feature:6733959-6734119:-1:exon

GI:4502072
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:6742013-6742068:-1:exon

position:6742013:-1
position: 6742013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6740596-6740661:-1:exon

position:6740596:-1
position: 6740596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6740661:-1
position: 6740661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6738047-6738094:-1:exon

position:6738047:-1
position: 6738047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6738094:-1
position: 6738094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6736773-6736817:-1:exon

position:6736773:-1
position: 6736773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6736817:-1
position: 6736817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6736078-6736503:-1:exon

position:6736078:-1
position: 6736078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6736503:-1
position: 6736503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6733959-6734119:-1:exon

position:6734119:-1
position: 6734119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AMELY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: AMGL
alternative label: AMGY
gene: AMELY
gene synonym: AMGL; AMGY
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: amelogenin, Y isoform precursor
translation: MGTWILFACLVGAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQSMIRPPYSSYGYEPMGGWLHHQIIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDLHLEAWPATDKTKQEEVD
SIO_010081: AMELY
subclass of: SO_0000673
so part of: AMELY
location: complement(join(6734114..6734119,6736078..6736503,6736773..6736817,6738047..6738094,6740596..6740649))
location: region:6734114-6740649:-1
so has part: feature:6740596-6740649:-1:exon
so has part: feature:6738047-6738094:-1:exon
so has part: feature:6736773-6736817:-1:exon
so has part: feature:6736078-6736503:-1:exon
so has part: feature:6734114-6734119:-1:exon

NP_001134.1
type: Protein
SIO_000068: ncbiprotein

GI:4502073
type: GI
SIO_000068: ncbigi

CCDS14778.1
type: CCDS
SIO_000068: ccds

position:6734114:-1
position: 6734114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6740649:-1
position: 6740649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6740596-6740649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6738047-6738094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6736773-6736817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6736078-6736503:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6734114-6734119:-1:exon

ATP5JP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: ATP5JP1
note: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 6769175..6769509
location: region:6769175-6769509:1
so has part: feature:6769175-6769509:1:exon

359997
type: Gene
SIO_000068: ncbigene

23933
type: HGNC
SIO_000068: hgnc

position:6769175:1
position: 6769175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6769509:1
position: 6769509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6769175-6769509:1:exon

TBL1Y
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: TBL1
gene: TBL1Y
gene synonym: TBL1
note: transducin (beta)-like 1, Y-linked; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 6778727..6959977
location: region:6778727-6959977:1
so has part: feature:6778727-6959977:1:exon
subclass of: SO_0000010

90665
type: Gene
SIO_000068: ncbigene

18502
type: HGNC
SIO_000068: hgnc

15962
type: HPRD
SIO_000068: hprd

400033
type: OMIM
SIO_000068: omim

position:6778727:1
position: 6778727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6959977:1
position: 6959977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6778727-6959977:1:exon

TBL1Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: TBL1
gene: TBL1Y
gene synonym: TBL1
product: transducin (beta)-like 1, Y-linked, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_033284.1
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(6778727..6779023,6780129..6780213,6846254..6846284,6863845..6863939,6889490..6889578,6893076..6893183,6911021..6911166,6931938..6932190,6938237..6938369,6938761..6938902,6939601..6939664,6939774..6939871,6942601..6942661,6948773..6948894,6953939..6954013,6954331..6954458,6955308..6955473,6958130..6958231,6959513..6959724)
location: region:6778727-6959724:1
so has part: feature:6778727-6779023:1:exon
so has part: feature:6780129-6780213:1:exon
so has part: feature:6846254-6846284:1:exon
so has part: feature:6863845-6863939:1:exon
so has part: feature:6889490-6889578:1:exon
so has part: feature:6893076-6893183:1:exon
so has part: feature:6911021-6911166:1:exon
so has part: feature:6931938-6932190:1:exon
so has part: feature:6938237-6938369:1:exon
so has part: feature:6938761-6938902:1:exon
so has part: feature:6939601-6939664:1:exon
so has part: feature:6939774-6939871:1:exon
so has part: feature:6942601-6942661:1:exon
so has part: feature:6948773-6948894:1:exon
so has part: feature:6953939-6954013:1:exon
so has part: feature:6954331-6954458:1:exon
so has part: feature:6955308-6955473:1:exon
so has part: feature:6958130-6958231:1:exon
so has part: feature:6959513-6959724:1:exon

GI:15150804
type: GI
SIO_000068: ncbigi

position:6959724:1
position: 6959724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6778727-6779023:1:exon

position:6779023:1
position: 6779023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6780129-6780213:1:exon

position:6780129:1
position: 6780129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6780213:1
position: 6780213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6846254-6846284:1:exon

position:6846254:1
position: 6846254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6846284:1
position: 6846284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6863845-6863939:1:exon

position:6863845:1
position: 6863845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6863939:1
position: 6863939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6889490-6889578:1:exon

position:6889490:1
position: 6889490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6889578:1
position: 6889578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6893076-6893183:1:exon

position:6893076:1
position: 6893076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6893183:1
position: 6893183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6911021-6911166:1:exon

position:6911021:1
position: 6911021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6911166:1
position: 6911166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6931938-6932190:1:exon

position:6931938:1
position: 6931938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6932190:1
position: 6932190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6938237-6938369:1:exon

position:6938237:1
position: 6938237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6938369:1
position: 6938369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6938761-6938902:1:exon

position:6938761:1
position: 6938761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6938902:1
position: 6938902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6939601-6939664:1:exon

position:6939601:1
position: 6939601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6939664:1
position: 6939664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6939774-6939871:1:exon

position:6939774:1
position: 6939774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6939871:1
position: 6939871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6942601-6942661:1:exon

position:6942601:1
position: 6942601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6942661:1
position: 6942661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6948773-6948894:1:exon

position:6948773:1
position: 6948773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6948894:1
position: 6948894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6953939-6954013:1:exon

position:6953939:1
position: 6953939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6954013:1
position: 6954013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6954331-6954458:1:exon

position:6954331:1
position: 6954331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6954458:1
position: 6954458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6955308-6955473:1:exon

position:6955308:1
position: 6955308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6955473:1
position: 6955473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6958130-6958231:1:exon

position:6958130:1
position: 6958130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6958231:1
position: 6958231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6959513-6959724:1:exon

position:6959513:1
position: 6959513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TBL1Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: TBL1
gene: TBL1Y
gene synonym: TBL1
product: transducin (beta)-like 1, Y-linked, transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_134259.1
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(6778727..6779023,6780129..6780213,6846254..6846284,6889490..6889578,6893076..6893183,6911021..6911166,6931938..6932190,6938237..6938369,6938761..6938902,6939601..6939664,6939774..6939871,6942601..6942661,6948773..6948894,6953939..6954013,6954331..6954458,6955308..6955473,6958130..6958231,6959513..6959724)
location: region:6778727-6959724:1
so has part: feature:6778727-6779023:1:exon
so has part: feature:6780129-6780213:1:exon
so has part: feature:6846254-6846284:1:exon
so has part: feature:6889490-6889578:1:exon
so has part: feature:6893076-6893183:1:exon
so has part: feature:6911021-6911166:1:exon
so has part: feature:6931938-6932190:1:exon
so has part: feature:6938237-6938369:1:exon
so has part: feature:6938761-6938902:1:exon
so has part: feature:6939601-6939664:1:exon
so has part: feature:6939774-6939871:1:exon
so has part: feature:6942601-6942661:1:exon
so has part: feature:6948773-6948894:1:exon
so has part: feature:6953939-6954013:1:exon
so has part: feature:6954331-6954458:1:exon
so has part: feature:6955308-6955473:1:exon
so has part: feature:6958130-6958231:1:exon
so has part: feature:6959513-6959724:1:exon

GI:19913366
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:6778727-6779023:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6780129-6780213:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6846254-6846284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6889490-6889578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6893076-6893183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6911021-6911166:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6931938-6932190:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6938237-6938369:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6938761-6938902:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6939601-6939664:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6939774-6939871:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6942601-6942661:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6948773-6948894:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6953939-6954013:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6954331-6954458:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6955308-6955473:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6958130-6958231:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6959513-6959724:1:exon

TBL1Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: TBL1
gene: TBL1Y
gene synonym: TBL1
product: transducin (beta)-like 1, Y-linked, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_134258.1
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(6778727..6779023,6780129..6780213,6863845..6863939,6889490..6889578,6893076..6893183,6911021..6911166,6931938..6932190,6938237..6938369,6938761..6938902,6939601..6939664,6939774..6939871,6942601..6942661,6948773..6948894,6953939..6954013,6954331..6954458,6955308..6955473,6958130..6958231,6959513..6959724)
location: region:6778727-6959724:1
so has part: feature:6778727-6779023:1:exon
so has part: feature:6780129-6780213:1:exon
so has part: feature:6863845-6863939:1:exon
so has part: feature:6889490-6889578:1:exon
so has part: feature:6893076-6893183:1:exon
so has part: feature:6911021-6911166:1:exon
so has part: feature:6931938-6932190:1:exon
so has part: feature:6938237-6938369:1:exon
so has part: feature:6938761-6938902:1:exon
so has part: feature:6939601-6939664:1:exon
so has part: feature:6939774-6939871:1:exon
so has part: feature:6942601-6942661:1:exon
so has part: feature:6948773-6948894:1:exon
so has part: feature:6953939-6954013:1:exon
so has part: feature:6954331-6954458:1:exon
so has part: feature:6955308-6955473:1:exon
so has part: feature:6958130-6958231:1:exon
so has part: feature:6959513-6959724:1:exon

GI:19913364
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:6778727-6779023:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6780129-6780213:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6863845-6863939:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6889490-6889578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6893076-6893183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6911021-6911166:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6931938-6932190:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6938237-6938369:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6938761-6938902:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6939601-6939664:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6939774-6939871:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6942601-6942661:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6948773-6948894:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6953939-6954013:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6954331-6954458:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6955308-6955473:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6958130-6958231:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6959513-6959724:1:exon

TBL1Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: TBL1
gene: TBL1Y
gene synonym: TBL1
product: transducin (beta)-like 1, Y-linked, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein, and 60% coverage by RNAseq alignments
transcript id: XM_005262573.1
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(6778738..6779023,6780129..6780213,6846254..6846284,6863845..6863939,6889490..6889578,6911021..6911166,6931938..6932190,6934736..6934869,6938237..6938369,6938761..6938902,6939601..6939664,6939774..6939871,6942601..6942661,6948773..6948894,6953939..6954013,6954331..6954458,6955308..6955473,6958130..6958231,6959513..6959977)
location: region:6778738-6959977:1
so has part: feature:6778738-6779023:1:exon
so has part: feature:6780129-6780213:1:exon
so has part: feature:6846254-6846284:1:exon
so has part: feature:6863845-6863939:1:exon
so has part: feature:6889490-6889578:1:exon
so has part: feature:6911021-6911166:1:exon
so has part: feature:6931938-6932190:1:exon
so has part: feature:6934736-6934869:1:exon
so has part: feature:6938237-6938369:1:exon
so has part: feature:6938761-6938902:1:exon
so has part: feature:6939601-6939664:1:exon
so has part: feature:6939774-6939871:1:exon
so has part: feature:6942601-6942661:1:exon
so has part: feature:6948773-6948894:1:exon
so has part: feature:6953939-6954013:1:exon
so has part: feature:6954331-6954458:1:exon
so has part: feature:6955308-6955473:1:exon
so has part: feature:6958130-6958231:1:exon
so has part: feature:6959513-6959977:1:exon

GI:530426521
type: GI
SIO_000068: ncbigi

position:6778738:1
position: 6778738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6778738-6779023:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6780129-6780213:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6846254-6846284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6863845-6863939:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6889490-6889578:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6911021-6911166:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6931938-6932190:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6934736-6934869:1:exon

position:6934736:1
position: 6934736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6934869:1
position: 6934869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6938237-6938369:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6938761-6938902:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6939601-6939664:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6939774-6939871:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6942601-6942661:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6948773-6948894:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6953939-6954013:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6954331-6954458:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6955308-6955473:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6958130-6958231:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6959513-6959977:1:exon

FAM199YP
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: FAM199Y
gene: FAM199YP
gene synonym: FAM199Y
note: family with sequence similarity 199, Y-linked, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 6818467..6818657
location: region:6818467-6818657:1
so has part: feature:6818467-6818657:1:exon

360029
type: Gene
SIO_000068: ncbigene

23951
type: HGNC
SIO_000068: hgnc

position:6818467:1
position: 6818467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6818657:1
position: 6818657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6818467-6818657:1:exon

TBL1Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: TBL1
gene: TBL1Y
gene synonym: TBL1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1Y
translation: MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPSALISILQKGLQYVEAEISINKDGTVFDSRPIESLSLIVAVIPDVVQMRQQAFGEKLTQQQASAAATEASAMAKAATMTPAAISQQNPPKNREATVNGEENGAHEINNHSKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQGTGGIFEVCWNARGDKVGASASDGSVCVLDL
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(6893126..6893183,6911021..6911166,6931938..6932190,6938237..6938369,6938761..6938902,6939601..6939664,6939774..6939871,6942601..6942661,6948773..6948894,6953939..6954013,6954331..6954458,6955308..6955473,6958130..6958231,6959513..6959533)
location: region:6893126-6959533:1
so has part: feature:6893126-6893183:1:exon
so has part: feature:6911021-6911166:1:exon
so has part: feature:6931938-6932190:1:exon
so has part: feature:6938237-6938369:1:exon
so has part: feature:6938761-6938902:1:exon
so has part: feature:6939601-6939664:1:exon
so has part: feature:6939774-6939871:1:exon
so has part: feature:6942601-6942661:1:exon
so has part: feature:6948773-6948894:1:exon
so has part: feature:6953939-6954013:1:exon
so has part: feature:6954331-6954458:1:exon
so has part: feature:6955308-6955473:1:exon
so has part: feature:6958130-6958231:1:exon
so has part: feature:6959513-6959533:1:exon

NP_150600.1
type: Protein
SIO_000068: ncbiprotein

GI:15150805
type: GI
SIO_000068: ncbigi

CCDS14779.1
type: CCDS
SIO_000068: ccds

position:6893126:1
position: 6893126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6959533:1
position: 6959533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6893126-6893183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6911021-6911166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6931938-6932190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6938237-6938369:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6938761-6938902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6939601-6939664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6939774-6939871:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6942601-6942661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6948773-6948894:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6953939-6954013:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6954331-6954458:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6955308-6955473:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6958130-6958231:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6959513-6959533:1:exon

TBL1Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: TBL1
gene: TBL1Y
gene synonym: TBL1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1Y
translation: MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPSALISILQKGLQYVEAEISINKDGTVFDSRPIESLSLIVAVIPDVVQMRQQAFGEKLTQQQASAAATEASAMAKAATMTPAAISQQNPPKNREATVNGEENGAHEINNHSKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQGTGGIFEVCWNARGDKVGASASDGSVCVLDL
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(6893126..6893183,6911021..6911166,6931938..6932190,6938237..6938369,6938761..6938902,6939601..6939664,6939774..6939871,6942601..6942661,6948773..6948894,6953939..6954013,6954331..6954458,6955308..6955473,6958130..6958231,6959513..6959533)
location: region:6893126-6959533:1
so has part: feature:6893126-6893183:1:exon
so has part: feature:6911021-6911166:1:exon
so has part: feature:6931938-6932190:1:exon
so has part: feature:6938237-6938369:1:exon
so has part: feature:6938761-6938902:1:exon
so has part: feature:6939601-6939664:1:exon
so has part: feature:6939774-6939871:1:exon
so has part: feature:6942601-6942661:1:exon
so has part: feature:6948773-6948894:1:exon
so has part: feature:6953939-6954013:1:exon
so has part: feature:6954331-6954458:1:exon
so has part: feature:6955308-6955473:1:exon
so has part: feature:6958130-6958231:1:exon
so has part: feature:6959513-6959533:1:exon

NP_599020.1
type: Protein
SIO_000068: ncbiprotein

GI:19913365
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:6893126-6893183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6911021-6911166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6931938-6932190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6938237-6938369:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6938761-6938902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6939601-6939664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6939774-6939871:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6942601-6942661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6948773-6948894:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6953939-6954013:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6954331-6954458:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6955308-6955473:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6958130-6958231:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6959513-6959533:1:exon

TBL1Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: TBL1
gene: TBL1Y
gene synonym: TBL1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1Y
translation: MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPSALISILQKGLQYVEAEISINKDGTVFDSRPIESLSLIVAVIPDVVQMRQQAFGEKLTQQQASAAATEASAMAKAATMTPAAISQQNPPKNREATVNGEENGAHEINNHSKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQGTGGIFEVCWNARGDKVGASASDGSVCVLDL
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(6893126..6893183,6911021..6911166,6931938..6932190,6938237..6938369,6938761..6938902,6939601..6939664,6939774..6939871,6942601..6942661,6948773..6948894,6953939..6954013,6954331..6954458,6955308..6955473,6958130..6958231,6959513..6959533)
location: region:6893126-6959533:1
so has part: feature:6893126-6893183:1:exon
so has part: feature:6911021-6911166:1:exon
so has part: feature:6931938-6932190:1:exon
so has part: feature:6938237-6938369:1:exon
so has part: feature:6938761-6938902:1:exon
so has part: feature:6939601-6939664:1:exon
so has part: feature:6939774-6939871:1:exon
so has part: feature:6942601-6942661:1:exon
so has part: feature:6948773-6948894:1:exon
so has part: feature:6953939-6954013:1:exon
so has part: feature:6954331-6954458:1:exon
so has part: feature:6955308-6955473:1:exon
so has part: feature:6958130-6958231:1:exon
so has part: feature:6959513-6959533:1:exon

NP_599021.1
type: Protein
SIO_000068: ncbiprotein

GI:19913367
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:6893126-6893183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6911021-6911166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6931938-6932190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6938237-6938369:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6938761-6938902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6939601-6939664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6939774-6939871:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6942601-6942661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6948773-6948894:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6953939-6954013:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6954331-6954458:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6955308-6955473:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6958130-6958231:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6959513-6959533:1:exon

TBL1Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: TBL1
gene: TBL1Y
gene synonym: TBL1
product: transducin (beta)-like 1, Y-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 83% coverage by RNAseq alignments
transcript id: XM_005262572.1
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(6910921..6911166,6931938..6932190,6938237..6938369,6938761..6938902,6939601..6939664,6939774..6939871,6942601..6942661,6948773..6948894,6953939..6954013,6954331..6954458,6955308..6955473,6958130..6958231,6959513..6959614)
location: region:6910921-6959614:1
so has part: feature:6910921-6911166:1:exon
so has part: feature:6931938-6932190:1:exon
so has part: feature:6938237-6938369:1:exon
so has part: feature:6938761-6938902:1:exon
so has part: feature:6939601-6939664:1:exon
so has part: feature:6939774-6939871:1:exon
so has part: feature:6942601-6942661:1:exon
so has part: feature:6948773-6948894:1:exon
so has part: feature:6953939-6954013:1:exon
so has part: feature:6954331-6954458:1:exon
so has part: feature:6955308-6955473:1:exon
so has part: feature:6958130-6958231:1:exon
so has part: feature:6959513-6959614:1:exon

GI:530426519
type: GI
SIO_000068: ncbigi

position:6910921:1
position: 6910921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6959614:1
position: 6959614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6910921-6911166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6931938-6932190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6938237-6938369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6938761-6938902:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6939601-6939664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6939774-6939871:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6942601-6942661:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6948773-6948894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6953939-6954013:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6954331-6954458:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6955308-6955473:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6958130-6958231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6959513-6959614:1:exon

TBL1Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: TBL1
gene: TBL1Y
gene synonym: TBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin (beta)-like 1, Y-linked isoform X1
translation: MCLKSAGHFQISMAARPSFNLGLTQRQLSSLAAGFSHSAFTFGIESHISQSNINGTLVPPSALISILQKGLQYVEAEISINKDGTVFDSRPIESLSLIVAVIPDVVQMRQQAFGEKLTQQQASAAATEASAMAKAATMTPAAISQQNPPKNREATVNGEENGAHEINNHSKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQGTGGIFEVCWNARGDKVGASASDGSVCVLDL
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(6910921..6911166,6931938..6932190,6938237..6938369,6938761..6938902,6939601..6939664,6939774..6939871,6942601..6942661,6948773..6948894,6953939..6954013,6954331..6954458,6955308..6955473,6958130..6958231,6959513..6959533)
location: region:6910921-6959533:1
so has part: feature:6910921-6911166:1:exon
so has part: feature:6931938-6932190:1:exon
so has part: feature:6938237-6938369:1:exon
so has part: feature:6938761-6938902:1:exon
so has part: feature:6939601-6939664:1:exon
so has part: feature:6939774-6939871:1:exon
so has part: feature:6942601-6942661:1:exon
so has part: feature:6948773-6948894:1:exon
so has part: feature:6953939-6954013:1:exon
so has part: feature:6954331-6954458:1:exon
so has part: feature:6955308-6955473:1:exon
so has part: feature:6958130-6958231:1:exon
so has part: feature:6959513-6959533:1:exon

XP_005262629.1
type: Protein
SIO_000068: ncbiprotein

GI:530426520
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:6910921-6911166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6931938-6932190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6938237-6938369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6938761-6938902:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6939601-6939664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6939774-6939871:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6942601-6942661:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6948773-6948894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6953939-6954013:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6954331-6954458:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6955308-6955473:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6958130-6958231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6959513-6959533:1:exon

TBL1Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: TBL1
gene: TBL1Y
gene synonym: TBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin (beta)-like 1, Y-linked isoform X2
translation: MEIDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQGTGGIFEVCWNARGDKVGASASDGSVCVLDL
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(6938254..6938369,6938761..6938902,6939601..6939664,6939774..6939871,6942601..6942661,6948773..6948894,6953939..6954013,6954331..6954458,6955308..6955473,6958130..6958231,6959513..6959533)
location: region:6938254-6959533:1
so has part: feature:6938254-6938369:1:exon
so has part: feature:6938761-6938902:1:exon
so has part: feature:6939601-6939664:1:exon
so has part: feature:6939774-6939871:1:exon
so has part: feature:6942601-6942661:1:exon
so has part: feature:6948773-6948894:1:exon
so has part: feature:6953939-6954013:1:exon
so has part: feature:6954331-6954458:1:exon
so has part: feature:6955308-6955473:1:exon
so has part: feature:6958130-6958231:1:exon
so has part: feature:6959513-6959533:1:exon

XP_005262630.1
type: Protein
SIO_000068: ncbiprotein

GI:530426522
type: GI
SIO_000068: ncbigi

position:6938254:1
position: 6938254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6938254-6938369:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6938761-6938902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6939601-6939664:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6939774-6939871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6942601-6942661:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6948773-6948894:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6953939-6954013:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6954331-6954458:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6955308-6955473:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6958130-6958231:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6959513-6959533:1:exon

GPR143P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: OA1P
gene: GPR143P
gene synonym: OA1P
note: G protein-coupled receptor 143 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(6968439..6974546)
location: region:6968439-6974546:-1
so has part: feature:6968439-6974546:-1:exon

352896
type: Gene
SIO_000068: ncbigene

18499
type: HGNC
SIO_000068: hgnc

position:6968439:-1
position: 6968439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6974546:-1
position: 6974546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6968439-6974546:-1:exon

PRKY
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: PRKXP3
alternative label: PRKYP
gene: PRKY
gene synonym: PRKXP3; PRKYP
note: protein kinase, Y-linked, pseudogene; Derived by automated computational analysis using gene prediction method: BestRefSeq.
pseudo: true
so part of: sequence
location: 7142013..>7249588
location: region:7142013-7249588:1
so has part: feature:7142013-7249588:1:exon

5616
type: Gene
SIO_000068: ncbigene

9444
type: HGNC
SIO_000068: hgnc

400008
type: OMIM
SIO_000068: omim

position:7142013:1
position: 7142013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7249588:1
position: 7249588
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7142013-7249588:1:exon

PRKY
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: PRKXP3
alternative label: PRKYP
gene: PRKY
gene synonym: PRKXP3; PRKYP
product: protein kinase, Y-linked, pseudogene
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
pseudo: true
transcript id: NR_028062.1
SIO_010081: PRKY
so part of: PRKY
location: join(7142013..7142519,7171978..7172146,7193947..7194210,7209156..7209275,7224176..7224271,7235397..7235474,7239784..7239930,7243753..>7249588)
location: region:7142013-7249588:1
so has part: feature:7142013-7142519:1:exon
so has part: feature:7171978-7172146:1:exon
so has part: feature:7193947-7194210:1:exon
so has part: feature:7209156-7209275:1:exon
so has part: feature:7224176-7224271:1:exon
so has part: feature:7235397-7235474:1:exon
so has part: feature:7239784-7239930:1:exon
so has part: feature:7243753-7249588:1:exon

GI:254039635
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:7142013-7142519:1:exon

position:7142519:1
position: 7142519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7171978-7172146:1:exon

position:7171978:1
position: 7171978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7172146:1
position: 7172146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7193947-7194210:1:exon

position:7193947:1
position: 7193947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7194210:1
position: 7194210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7209156-7209275:1:exon

position:7209156:1
position: 7209156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7209275:1
position: 7209275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7224176-7224271:1:exon

position:7224176:1
position: 7224176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7224271:1
position: 7224271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7235397-7235474:1:exon

position:7235397:1
position: 7235397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7235474:1
position: 7235474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7239784-7239930:1:exon

position:7239784:1
position: 7239784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7239930:1
position: 7239930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7243753-7249588:1:exon

position:7243753:1
position: 7243753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBMY2HP
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: RBMY2HP
note: RNA binding motif protein, Y-linked, family 2, member H pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(7539509..7546019)
location: region:7539509-7546019:-1
so has part: feature:7539509-7546019:-1:exon

378953
type: Gene
SIO_000068: ncbigene

23893
type: HGNC
SIO_000068: hgnc

position:7539509:-1
position: 7539509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7546019:-1
position: 7546019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7539509-7546019:-1:exon

TSPY12P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: TSPYP2
gene: TSPY12P
gene synonym: TSPYP2
note: testis specific protein, Y-linked 12, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(7554842..7557634)
location: region:7554842-7557634:-1
so has part: feature:7554842-7557634:-1:exon

377997
type: Gene
SIO_000068: ncbigene

23904
type: HGNC
SIO_000068: hgnc

position:7554842:-1
position: 7554842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7557634:-1
position: 7557634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7554842-7557634:-1:exon

TSPY12P
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
alternative label: TSPYP2
gene: TSPY12P
gene synonym: TSPYP2
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: TSPY12P
subclass of: SO_0000673
so part of: TSPY12P
location: complement(7557113..7557634)
location: region:7557113-7557634:-1
so has part: feature:7557113-7557634:-1:exon

position:7557113:-1
position: 7557113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7557113-7557634:-1:exon

TTTY16
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: NCRNA00139
gene: TTTY16
gene synonym: NCRNA00139
note: testis-specific transcript, Y-linked 16 (non-protein coding); Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(7567398..7569288)
location: region:7567398-7569288:-1
so has part: feature:7567398-7569288:-1:exon

252948
type: Gene
SIO_000068: ncbigene

18840
type: HGNC
SIO_000068: hgnc

position:7567398:-1
position: 7567398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7569288:-1
position: 7569288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7567398-7569288:-1:exon

TTTY16
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: NCRNA00139
gene: TTTY16
gene synonym: NCRNA00139
product: testis-specific transcript, Y-linked 16 (non-protein coding)
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_001552.1
SIO_010081: TTTY16
so part of: TTTY16
location: complement(join(7567398..7567528,7569228..7569288))
location: region:7567398-7569288:-1
so has part: feature:7569228-7569288:-1:exon
so has part: feature:7567398-7567528:-1:exon

GI:32563554
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:7569228-7569288:-1:exon

position:7569228:-1
position: 7569228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7567398-7567528:-1:exon

position:7567528:-1
position: 7567528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RFTN1P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: RFTN1P1
note: raftlin, lipid raft linker 1 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(7581026..7644746)
location: region:7581026-7644746:-1
so has part: feature:7581026-7644746:-1:exon

360015
type: Gene
SIO_000068: ncbigene

23971
type: HGNC
SIO_000068: hgnc

position:7581026:-1
position: 7581026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7644746:-1
position: 7644746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7581026-7644746:-1:exon

TTTY12
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: NCRNA00135
alternative label: TTY11
alternative label: TTY12
gene: TTTY12
gene synonym: NCRNA00135; TTY11; TTY12
note: testis-specific transcript, Y-linked 12 (non-protein coding); Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 7672965..>7678724
location: region:7672965-7678724:1
so has part: feature:7672965-7678724:1:exon

83867
type: Gene
SIO_000068: ncbigene

18493
type: HGNC
SIO_000068: hgnc

position:7672965:1
position: 7672965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7678724:1
position: 7678724
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7672965-7678724:1:exon

TTTY12
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: NCRNA00135
alternative label: TTY11
alternative label: TTY12
gene: TTTY12
gene synonym: NCRNA00135; TTY11; TTY12
product: testis-specific transcript, Y-linked 12 (non-protein coding)
inference: similar to RNA sequence (same species):RefSeq:NR_001551.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_001551.1
SIO_010081: TTTY12
so part of: TTTY12
location: join(7672965..7673120,7677902..>7678724)
location: region:7672965-7678724:1
so has part: feature:7672965-7673120:1:exon
so has part: feature:7677902-7678724:1:exon

GI:32563553
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:7672965-7673120:1:exon

position:7673120:1
position: 7673120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7677902-7678724:1:exon

position:7677902:1
position: 7677902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIM60P1Y
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: TRIM60P1
alternative label: TRIM60PY1
gene: TRIM60P1Y
gene synonym: TRIM60P1; TRIM60PY1
note: tripartite motif containing 60 pseudogene 1, Y-linked; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(7713524..7714504)
location: region:7713524-7714504:-1
so has part: feature:7713524-7714504:-1:exon

100420362
type: Gene
SIO_000068: ncbigene

38403
type: HGNC
SIO_000068: hgnc

position:7713524:-1
position: 7713524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7714504:-1
position: 7714504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7713524-7714504:-1:exon

ZNF92P1Y
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: ZNF92P1Y
note: zinc finger protein 92 pseudogene 1, Y-linked; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(7721751..7722884)
location: region:7721751-7722884:-1
so has part: feature:7721751-7722884:-1:exon

100419554
type: Gene
SIO_000068: ncbigene

39553
type: HGNC
SIO_000068: hgnc

position:7721751:-1
position: 7721751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7722884:-1
position: 7722884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7721751-7722884:-1:exon

TRIM60P2Y
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: TRIM60P2
alternative label: TRIM60PY2
gene: TRIM60P2Y
gene synonym: TRIM60P2; TRIM60PY2
note: tripartite motif containing 60 pseudogene 2, Y-linked; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(7773577..7775358)
location: region:7773577-7775358:-1
so has part: feature:7773577-7775358:-1:exon

100420363
type: Gene
SIO_000068: ncbigene

38405
type: HGNC
SIO_000068: hgnc

position:7773577:-1
position: 7773577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7775358:-1
position: 7775358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7773577-7775358:-1:exon

ZNF736P8Y
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: ZNF736P8Y
note: zinc finger protein 736 pseudogene 8, Y-linked; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(7781475..7782176)
location: region:7781475-7782176:-1
so has part: feature:7781475-7782176:-1:exon

100419724
type: Gene
SIO_000068: ncbigene

38406
type: HGNC
SIO_000068: hgnc

position:7781475:-1
position: 7781475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7782176:-1
position: 7782176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7781475-7782176:-1:exon

BPY2DP
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: BPY2DP
note: basic charge, Y-linked, 2D, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(7794130..7817040)
location: region:7794130-7817040:-1
so has part: feature:7794130-7817040:-1:exon

100885797
type: Gene
SIO_000068: ncbigene

38794
type: HGNC
SIO_000068: hgnc

position:7794130:-1
position: 7794130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7817040:-1
position: 7817040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7794130-7817040:-1:exon

BPY2DP
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: BPY2DP
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: BPY2DP
subclass of: SO_0000673
so part of: BPY2DP
location: complement(7817010..7817040)
location: region:7817010-7817040:-1
so has part: feature:7817010-7817040:-1:exon

position:7817010:-1
position: 7817010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7817010-7817040:-1:exon

ZNF736P7Y
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: ZNF736P7Y
note: zinc finger protein 736 pseudogene 7, Y-linked; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(7858984..7859889)
location: region:7858984-7859889:-1
so has part: feature:7858984-7859889:-1:exon

100419725
type: Gene
SIO_000068: ncbigene

38404
type: HGNC
SIO_000068: hgnc

position:7858984:-1
position: 7858984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7859889:-1
position: 7859889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7858984-7859889:-1:exon

ZNF736P9Y
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: ZNF736P9Y
note: zinc finger protein 736 pseudogene 9, Y-linked; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(7937035..7938159)
location: region:7937035-7938159:-1
so has part: feature:7937035-7938159:-1:exon

100419726
type: Gene
SIO_000068: ncbigene

38408
type: HGNC
SIO_000068: hgnc

position:7937035:-1
position: 7937035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7938159:-1
position: 7938159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7937035-7938159:-1:exon

RBMY2JP
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: RBMY2JP
note: RNA binding motif protein, Y-linked, family 2, member J pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 7995165..8012671
location: region:7995165-8012671:1
so has part: feature:7995165-8012671:1:exon

378955
type: Gene
SIO_000068: ncbigene

23918
type: HGNC
SIO_000068: hgnc

position:7995165:1
position: 7995165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8012671:1
position: 8012671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7995165-8012671:1:exon

FAM8A7P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: FAM8A7P
note: family with sequence similarity 8, member A7 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(8045867..8047208)
location: region:8045867-8047208:-1
so has part: feature:8045867-8047208:-1:exon

386725
type: Gene
SIO_000068: ncbigene

23868
type: HGNC
SIO_000068: hgnc

position:8045867:-1
position: 8045867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8047208:-1
position: 8047208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8045867-8047208:-1:exon

TTTY30P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: TTTY30P
note: testis-specific transcript, Y-linked 30, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(8121813..8122307)
location: region:8121813-8122307:-1
so has part: feature:8121813-8122307:-1:exon

100287844
type: Gene
SIO_000068: ncbigene

38604
type: HGNC
SIO_000068: hgnc

position:8121813:-1
position: 8121813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8122307:-1
position: 8122307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8121813-8122307:-1:exon

RBMY2KP
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: RBMY2KP
note: RNA binding motif protein, Y-linked, family 2, member K pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(8132217..8147187)
location: region:8132217-8147187:-1
so has part: feature:8132217-8147187:-1:exon

140100
type: Gene
SIO_000068: ncbigene

23888
type: HGNC
SIO_000068: hgnc

position:8132217:-1
position: 8132217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8147187:-1
position: 8147187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8132217-8147187:-1:exon

TSPY24P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: TSPY24P
note: testis specific protein, Y-linked 24, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 8148239..8150250
location: region:8148239-8150250:1
so has part: feature:8148239-8150250:1:exon

100874287
type: Gene
SIO_000068: ncbigene

38725
type: HGNC
SIO_000068: hgnc

position:8148239:1
position: 8148239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8150250:1
position: 8150250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8148239-8150250:1:exon

ZNF736P6Y
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: ZNF736P6Y
note: zinc finger protein 736 pseudogene 6, Y-linked; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 8218960..8220061
location: region:8218960-8220061:1
so has part: feature:8218960-8220061:1:exon

100419732
type: Gene
SIO_000068: ncbigene

38440
type: HGNC
SIO_000068: hgnc

position:8218960:1
position: 8218960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8220061:1
position: 8220061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8218960-8220061:1:exon

MTND6P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: MTND6P1
note: MT-ND6 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(8231577..8232000)
location: region:8231577-8232000:-1
so has part: feature:8231577-8232000:-1:exon

100499469
type: Gene
SIO_000068: ncbigene

38730
type: HGNC
SIO_000068: hgnc

position:8231577:-1
position: 8231577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8232000:-1
position: 8232000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8231577-8232000:-1:exon

MTCYBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: MTCYBP1
note: MT-CYB pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 8232073..8233191
location: region:8232073-8233191:1
so has part: feature:8232073-8233191:1:exon

100499418
type: Gene
SIO_000068: ncbigene

38729
type: HGNC
SIO_000068: hgnc

position:8232073:1
position: 8232073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8233191:1
position: 8233191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8232073-8233191:1:exon

MTND1P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: MTND1P1
note: MT-ND1 pseudogene 1; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 8239704..8240071
location: region:8239704-8240071:1
so has part: feature:8239704-8240071:1:exon

100499468
type: Gene
SIO_000068: ncbigene

38728
type: HGNC
SIO_000068: hgnc

position:8239704:1
position: 8239704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8240071:1
position: 8240071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8239704-8240071:1:exon

TRNAQ35P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: TRNAQ35P
note: transfer RNA glutamine 35 (anticodon UUG) pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(8240140..8240214)
location: region:8240140-8240214:-1
so has part: feature:8240140-8240214:-1:exon

100189448
type: Gene
SIO_000068: ncbigene

35018
type: HGNC
SIO_000068: hgnc

position:8240140:-1
position: 8240140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8240214:-1
position: 8240214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8240140-8240214:-1:exon

MTND2P3
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: MTND2P3
note: MT-ND2 pseudogene 3; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 8240282..8240751
location: region:8240282-8240751:1
so has part: feature:8240282-8240751:1:exon

100499457
type: Gene
SIO_000068: ncbigene

38727
type: HGNC
SIO_000068: hgnc

position:8240282:1
position: 8240282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8240751:1
position: 8240751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8240282-8240751:1:exon

TRIM60P3Y
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: TRIM60P3
alternative label: TRIM60PY3
gene: TRIM60P3Y
gene synonym: TRIM60P3; TRIM60PY3
note: tripartite motif containing 60 pseudogene 3, Y-linked; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(8281087..8282095)
location: region:8281087-8282095:-1
so has part: feature:8281087-8282095:-1:exon

100420364
type: Gene
SIO_000068: ncbigene

38409
type: HGNC
SIO_000068: hgnc

position:8281087:-1
position: 8281087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8282095:-1
position: 8282095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8281087-8282095:-1:exon

ZNF736P10Y
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: ZNF736P10Y
note: zinc finger protein 736 pseudogene 10, Y-linked; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(8286892..8287964)
location: region:8286892-8287964:-1
so has part: feature:8286892-8287964:-1:exon

100419727
type: Gene
SIO_000068: ncbigene

38410
type: HGNC
SIO_000068: hgnc

position:8286892:-1
position: 8286892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8287964:-1
position: 8287964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8286892-8287964:-1:exon

TTTY18
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: NCRNA00143
gene: TTTY18
gene synonym: NCRNA00143
note: testis-specific transcript, Y-linked 18 (non-protein coding); Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(8551411..8551919)
location: region:8551411-8551919:-1
so has part: feature:8551411-8551919:-1:exon

252950
type: Gene
SIO_000068: ncbigene

18842
type: HGNC
SIO_000068: hgnc

position:8551411:-1
position: 8551411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8551919:-1
position: 8551919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8551411-8551919:-1:exon

TTTY18
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: NCRNA00143
gene: TTTY18
gene synonym: NCRNA00143
product: testis-specific transcript, Y-linked 18 (non-protein coding)
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_001550.1
SIO_010081: TTTY18
so part of: TTTY18
location: complement(join(8551411..8551473,8551762..8551919))
location: region:8551411-8551919:-1
so has part: feature:8551762-8551919:-1:exon
so has part: feature:8551411-8551473:-1:exon

GI:32563552
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:8551762-8551919:-1:exon

position:8551762:-1
position: 8551762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8551411-8551473:-1:exon

position:8551473:-1
position: 8551473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TTTY19
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: NCRNA00144
gene: TTTY19
gene synonym: NCRNA00144
note: testis-specific transcript, Y-linked 19 (non-protein coding); Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 8572513..8573324
location: region:8572513-8573324:1
so has part: feature:8572513-8573324:1:exon

252952
type: Gene
SIO_000068: ncbigene

18843
type: HGNC
SIO_000068: hgnc

position:8572513:1
position: 8572513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8573324:1
position: 8573324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8572513-8573324:1:exon

TTTY19
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: NCRNA00144
gene: TTTY19
gene synonym: NCRNA00144
product: testis-specific transcript, Y-linked 19 (non-protein coding)
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_001549.1
SIO_010081: TTTY19
so part of: TTTY19
location: join(8572513..8572600,8573144..8573324)
location: region:8572513-8573324:1
so has part: feature:8572513-8572600:1:exon
so has part: feature:8573144-8573324:1:exon

GI:32563551
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:8572513-8572600:1:exon

position:8572600:1
position: 8572600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8573144-8573324:1:exon

position:8573144:1
position: 8573144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTTY11
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: NCRNA00134
alternative label: TTY11
gene: TTTY11
gene synonym: NCRNA00134; TTY11
note: testis-specific transcript, Y-linked 11 (non-protein coding); Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(8651354..8685423)
location: region:8651354-8685423:-1
so has part: feature:8651354-8685423:-1:exon

83866
type: Gene
SIO_000068: ncbigene

18492
type: HGNC
SIO_000068: hgnc

position:8651354:-1
position: 8651354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8685423:-1
position: 8685423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8651354-8685423:-1:exon

TTTY11
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: NCRNA00134
alternative label: TTY11
gene: TTTY11
gene synonym: NCRNA00134; TTY11
product: testis-specific transcript, Y-linked 11 (non-protein coding)
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_001548.2
SIO_010081: TTTY11
so part of: TTTY11
location: complement(join(8651354..8651447,8651929..8652244,8657041..8657343,8662902..8662985,8685387..8685423))
location: region:8651354-8685423:-1
so has part: feature:8685387-8685423:-1:exon
so has part: feature:8662902-8662985:-1:exon
so has part: feature:8657041-8657343:-1:exon
so has part: feature:8651929-8652244:-1:exon
so has part: feature:8651354-8651447:-1:exon

GI:205277473
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:8685387-8685423:-1:exon

position:8685387:-1
position: 8685387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8662902-8662985:-1:exon

position:8662902:-1
position: 8662902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8662985:-1
position: 8662985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8657041-8657343:-1:exon

position:8657041:-1
position: 8657041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8657343:-1
position: 8657343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8651929-8652244:-1:exon

position:8651929:-1
position: 8651929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8652244:-1
position: 8652244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8651354-8651447:-1:exon

position:8651447:-1
position: 8651447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBMY2MP
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: RBMY2MP
note: RNA binding motif protein, Y-linked, family 2, member M pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 8772259..8784385
location: region:8772259-8784385:1
so has part: feature:8772259-8784385:1:exon

140101
type: Gene
SIO_000068: ncbigene

23889
type: HGNC
SIO_000068: hgnc

position:8772259:1
position: 8772259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8784385:1
position: 8784385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8772259-8784385:1:exon

TTTY24P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: TTTY24P
note: testis-specific transcript, Y-linked 24, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 8838096..8838485
location: region:8838096-8838485:1
so has part: feature:8838096-8838485:1:exon

100287941
type: Gene
SIO_000068: ncbigene

38521
type: HGNC
SIO_000068: hgnc

position:8838096:1
position: 8838096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8838485:1
position: 8838485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8838096-8838485:1:exon

OFD1P3Y
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: OFD1P19
alternative label: OFD1P19Y
alternative label: OFD1P3
alternative label: OFD1PY19
alternative label: OFD1PY3
alternative label: OFDYP3
gene: OFD1P3Y
gene synonym: OFD1P19; OFD1P19Y; OFD1P3; OFD1PY19; OFD1PY3; OFDYP3
note: OFD1 pseudogene 3, Y-linked; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 8902151..8908229
location: region:8902151-8908229:1
so has part: feature:8902151-8908229:1:exon

386687
type: Gene
SIO_000068: ncbigene

23875
type: HGNC
SIO_000068: hgnc

position:8902151:1
position: 8902151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8908229:1
position: 8908229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8902151-8908229:1:exon

CDY3P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: CDY3P
note: chromodomain protein, Y-linked 3 pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(9002837..9005636)
location: region:9002837-9005636:-1
so has part: feature:9002837-9005636:-1:exon

286556
type: Gene
SIO_000068: ncbigene

23849
type: HGNC
SIO_000068: hgnc

position:9002837:-1
position: 9002837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9005636:-1
position: 9005636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9002837-9005636:-1:exon

CDY3P
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: CDY3P
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: CDY3P
subclass of: SO_0000673
so part of: CDY3P
location: complement(9003727..9005636)
location: region:9003727-9005636:-1
so has part: feature:9003727-9005636:-1:exon

position:9003727:-1
position: 9003727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9003727-9005636:-1:exon

USP9YP22
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: USP9YP22
note: ubiquitin specific peptidase 9, Y-linked pseudogene 22; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 9023208..9023421
location: region:9023208-9023421:1
so has part: feature:9023208-9023421:1:exon

100874383
type: Gene
SIO_000068: ncbigene

38758
type: HGNC
SIO_000068: hgnc

position:9023208:1
position: 9023208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9023421:1
position: 9023421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9023208-9023421:1:exon

USP9YP4
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: USP9YP4
note: ubiquitin specific peptidase 9, Y-linked pseudogene 4; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(9027248..9042222)
location: region:9027248-9042222:-1
so has part: feature:9027248-9042222:-1:exon

387359
type: Gene
SIO_000068: ncbigene

37740
type: HGNC
SIO_000068: hgnc

position:9027248:-1
position: 9027248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9042222:-1
position: 9042222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9027248-9042222:-1:exon

TCEB1P4
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: TCEB1P4
note: transcription elongation factor B (SIII), polypeptide 1 pseudogene 4; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 9068535..9068856
location: region:9068535-9068856:1
so has part: feature:9068535-9068856:1:exon

100462873
type: Gene
SIO_000068: ncbigene

38141
type: HGNC
SIO_000068: hgnc

position:9068535:1
position: 9068535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9068856:1
position: 9068856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9068535-9068856:1:exon

RBMY1A3P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: RBMY1A3P
note: RNA binding motif protein, Y-linked, family 1, member A3 pseudogene; Derived by automated computational analysis using gene prediction method: BestRefSeq.
pseudo: true
so part of: sequence
location: complement(9154670..9160483)
location: region:9154670-9160483:-1
so has part: feature:9154670-9160483:-1:exon

286557
type: Gene
SIO_000068: ncbigene

18849
type: HGNC
SIO_000068: hgnc

position:9154670:-1
position: 9154670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9160483:-1
position: 9160483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9154670-9160483:-1:exon

RBMY1A3P
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: RBMY1A3P
product: RNA binding motif protein, Y-linked, family 1, member A3 pseudogene
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
pseudo: true
transcript id: NR_001547.1
SIO_010081: RBMY1A3P
so part of: RBMY1A3P
location: complement(join(9154670..9154700,9156601..9156778,9159794..9159897,9160370..9160483))
location: region:9154670-9160483:-1
so has part: feature:9160370-9160483:-1:exon
so has part: feature:9159794-9159897:-1:exon
so has part: feature:9156601-9156778:-1:exon
so has part: feature:9154670-9154700:-1:exon

GI:32563549
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:9160370-9160483:-1:exon

position:9160370:-1
position: 9160370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9159794-9159897:-1:exon

position:9159794:-1
position: 9159794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9159897:-1
position: 9159897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9156601-9156778:-1:exon

position:9156601:-1
position: 9156601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9156778:-1
position: 9156778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9154670-9154700:-1:exon

position:9154700:-1
position: 9154700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBMY1GP
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: RBMY1G
gene: RBMY1GP
gene synonym: RBMY1G
note: RNA binding motif protein, Y-linked, family 1, member G, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 9163099..9168196
location: region:9163099-9168196:1
so has part: feature:9163099-9168196:1:exon

100287769
type: Gene
SIO_000068: ncbigene

9915
type: HGNC
SIO_000068: hgnc

position:9163099:1
position: 9163099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9168196:1
position: 9168196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9163099-9168196:1:exon

TTTY20
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: NCRNA00145
gene: TTTY20
gene synonym: NCRNA00145
note: testis-specific transcript, Y-linked 20 (non-protein coding); Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(9167489..9172441)
location: region:9167489-9172441:-1
so has part: feature:9167489-9172441:-1:exon

252951
type: Gene
SIO_000068: ncbigene

18844
type: HGNC
SIO_000068: hgnc

position:9167489:-1
position: 9167489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9172441:-1
position: 9172441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9167489-9172441:-1:exon

TTTY20
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: NCRNA00145
gene: TTTY20
gene synonym: NCRNA00145
product: testis-specific transcript, Y-linked 20 (non-protein coding)
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_001546.1
SIO_010081: TTTY20
so part of: TTTY20
location: complement(join(9167489..9167665,9172360..9172441))
location: region:9167489-9172441:-1
so has part: feature:9172360-9172441:-1:exon
so has part: feature:9167489-9167665:-1:exon

GI:32563548
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:9172360-9172441:-1:exon

position:9172360:-1
position: 9172360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9167489-9167665:-1:exon

position:9167665:-1
position: 9167665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSPY4
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: TSPY10
alternative label: TSPY8
gene: TSPY4
gene synonym: TSPY10; TSPY8
note: testis specific protein, Y-linked 4; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 9175098..9177888
location: region:9175098-9177888:1
so has part: feature:9175098-9177888:1:exon
subclass of: SO_0000010

728395
type: Gene
SIO_000068: ncbigene

37287
type: HGNC
SIO_000068: hgnc

position:9175098:1
position: 9175098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9177888:1
position: 9177888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9175098-9177888:1:exon

TSPY4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: TSPY10
alternative label: TSPY8
gene: TSPY4
gene synonym: TSPY10; TSPY8
product: testis specific protein, Y-linked 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 30 Proteins, and 100% coverage by RNAseq alignments, including 3 samples with support for all introns
transcript id: XM_005272743.1
SIO_010081: TSPY4
subclass of: SO_0000673
so part of: TSPY4
location: join(9175098..9175622,9176230..9176307,9176436..9176547,9176649..9176794,9176890..9176982,9177677..9177888)
location: region:9175098-9177888:1
so has part: feature:9175098-9175622:1:exon
so has part: feature:9176230-9176307:1:exon
so has part: feature:9176436-9176547:1:exon
so has part: feature:9176649-9176794:1:exon
so has part: feature:9176890-9176982:1:exon
so has part: feature:9177677-9177888:1:exon

GI:530427644
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:9175098-9175622:1:exon

position:9175622:1
position: 9175622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9176230-9176307:1:exon

position:9176230:1
position: 9176230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9176307:1
position: 9176307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9176436-9176547:1:exon

position:9176436:1
position: 9176436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9176547:1
position: 9176547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9176649-9176794:1:exon

position:9176649:1
position: 9176649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9176794:1
position: 9176794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9176890-9176982:1:exon

position:9176890:1
position: 9176890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9176982:1
position: 9176982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9177677-9177888:1:exon

position:9177677:1
position: 9177677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPY4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: TSPY10
alternative label: TSPY8
gene: TSPY4
gene synonym: TSPY10; TSPY8
product: testis specific protein, Y-linked 4
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001164471.1
SIO_010081: TSPY4
subclass of: SO_0000673
so part of: TSPY4
location: join(9175119..9175622,9176230..9176307,9176436..9176547,9176649..9176794,9176901..9176982,9177677..9177887)
location: region:9175119-9177887:1
so has part: feature:9175119-9175622:1:exon
so has part: feature:9176230-9176307:1:exon
so has part: feature:9176436-9176547:1:exon
so has part: feature:9176649-9176794:1:exon
so has part: feature:9176901-9176982:1:exon
so has part: feature:9177677-9177887:1:exon

GI:256600225
type: GI
SIO_000068: ncbigi

position:9175119:1
position: 9175119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9177887:1
position: 9177887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9175119-9175622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9176230-9176307:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9176436-9176547:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9176649-9176794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9176901-9176982:1:exon

position:9176901:1
position: 9176901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9177677-9177887:1:exon

TSPY4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: TSPY10
alternative label: TSPY8
gene: TSPY4
gene synonym: TSPY10; TSPY8
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: testis-specific Y-encoded protein 4
translation: MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS
SIO_010081: TSPY4
subclass of: SO_0000673
so part of: TSPY4
location: join(9175119..9175622,9176230..9176307,9176436..9176547,9176649..9176794,9176901..9176982,9177677..9177699)
location: region:9175119-9177699:1
so has part: feature:9175119-9175622:1:exon
so has part: feature:9176230-9176307:1:exon
so has part: feature:9176436-9176547:1:exon
so has part: feature:9176649-9176794:1:exon
so has part: feature:9176901-9176982:1:exon
so has part: feature:9177677-9177699:1:exon

NP_001157943.1
type: Protein
SIO_000068: ncbiprotein

GI:256600226
type: GI
SIO_000068: ncbigi

CCDS48202.1
type: CCDS
SIO_000068: ccds

position:9177699:1
position: 9177699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9175119-9175622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9176230-9176307:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9176436-9176547:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9176649-9176794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9176901-9176982:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9177677-9177699:1:exon

TSPY4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: TSPY10
alternative label: TSPY8
gene: TSPY4
gene synonym: TSPY10; TSPY8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 4 isoform X1
translation: MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAESPDRSYVRTCGAIPCNTTRG
SIO_010081: TSPY4
subclass of: SO_0000673
so part of: TSPY4
location: join(9175119..9175622,9176230..9176307,9176436..9176547,9176649..9176794,9176890..9176952)
location: region:9175119-9176952:1
so has part: feature:9175119-9175622:1:exon
so has part: feature:9176230-9176307:1:exon
so has part: feature:9176436-9176547:1:exon
so has part: feature:9176649-9176794:1:exon
so has part: feature:9176890-9176952:1:exon

XP_005272800.1
type: Protein
SIO_000068: ncbiprotein

GI:530427645
type: GI
SIO_000068: ncbigi

position:9176952:1
position: 9176952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9175119-9175622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9176230-9176307:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9176436-9176547:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9176649-9176794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9176890-9176952:1:exon

TSPY8
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: TSPY8
note: testis specific protein, Y-linked 8; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 9195442..9198203
location: region:9195442-9198203:1
so has part: feature:9195442-9198203:1:exon
subclass of: SO_0000010

728403
type: Gene
SIO_000068: ncbigene

37471
type: HGNC
SIO_000068: hgnc

position:9195442:1
position: 9195442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9198203:1
position: 9198203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9195442-9198203:1:exon

TSPY8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
gene: TSPY8
product: testis specific protein, Y-linked 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 30 Proteins, and 100% coverage by RNAseq alignments, including 3 samples with support for all introns
transcript id: XM_005272744.1
SIO_010081: TSPY8
subclass of: SO_0000673
so part of: TSPY8
location: join(9195442..9195937,9196545..9196622,9196751..9196862,9196964..9197109,9197205..9197297,9197992..9198203)
location: region:9195442-9198203:1
so has part: feature:9195442-9195937:1:exon
so has part: feature:9196545-9196622:1:exon
so has part: feature:9196751-9196862:1:exon
so has part: feature:9196964-9197109:1:exon
so has part: feature:9197205-9197297:1:exon
so has part: feature:9197992-9198203:1:exon

GI:530427646
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:9195442-9195937:1:exon

position:9195937:1
position: 9195937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9196545-9196622:1:exon

position:9196545:1
position: 9196545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9196622:1
position: 9196622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9196751-9196862:1:exon

position:9196751:1
position: 9196751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9196862:1
position: 9196862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9196964-9197109:1:exon

position:9196964:1
position: 9196964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9197109:1
position: 9197109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9197205-9197297:1:exon

position:9197205:1
position: 9197205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9197297:1
position: 9197297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9197992-9198203:1:exon

position:9197992:1
position: 9197992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPY8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
gene: TSPY8
product: testis specific protein, Y-linked 8
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001243721.1
SIO_010081: TSPY8
subclass of: SO_0000673
so part of: TSPY8
location: join(9195452..9195937,9196545..9196622,9196751..9196862,9196964..9197109,9197216..9197297,9197992..9198202)
location: region:9195452-9198202:1
so has part: feature:9195452-9195937:1:exon
so has part: feature:9196545-9196622:1:exon
so has part: feature:9196751-9196862:1:exon
so has part: feature:9196964-9197109:1:exon
so has part: feature:9197216-9197297:1:exon
so has part: feature:9197992-9198202:1:exon

GI:343962647
type: GI
SIO_000068: ncbigi

position:9195452:1
position: 9195452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9198202:1
position: 9198202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9195452-9195937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9196545-9196622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9196751-9196862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9196964-9197109:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9197216-9197297:1:exon

position:9197216:1
position: 9197216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9197992-9198202:1:exon

TSPY8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
gene: TSPY8
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: testis-specific Y-encoded protein 8
translation: MRPEGSLTYWVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYLDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS
SIO_010081: TSPY8
subclass of: SO_0000673
so part of: TSPY8
location: join(9195452..9195937,9196545..9196622,9196751..9196862,9196964..9197109,9197216..9197297,9197992..9198014)
location: region:9195452-9198014:1
so has part: feature:9195452-9195937:1:exon
so has part: feature:9196545-9196622:1:exon
so has part: feature:9196751-9196862:1:exon
so has part: feature:9196964-9197109:1:exon
so has part: feature:9197216-9197297:1:exon
so has part: feature:9197992-9198014:1:exon

NP_001230650.1
type: Protein
SIO_000068: ncbiprotein

GI:343962648
type: GI
SIO_000068: ncbigi

CCDS59533.1
type: CCDS
SIO_000068: ccds

position:9198014:1
position: 9198014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9195452-9195937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9196545-9196622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9196751-9196862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9196964-9197109:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9197216-9197297:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9197992-9198014:1:exon

TSPY8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
gene: TSPY8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 8 isoform X1
translation: MRPEGSLTYWVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYLDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAESPDRSYVRTCGAIPCNTTRG
SIO_010081: TSPY8
subclass of: SO_0000673
so part of: TSPY8
location: join(9195452..9195937,9196545..9196622,9196751..9196862,9196964..9197109,9197205..9197267)
location: region:9195452-9197267:1
so has part: feature:9195452-9195937:1:exon
so has part: feature:9196545-9196622:1:exon
so has part: feature:9196751-9196862:1:exon
so has part: feature:9196964-9197109:1:exon
so has part: feature:9197205-9197267:1:exon

XP_005272801.1
type: Protein
SIO_000068: ncbiprotein

GI:530427647
type: GI
SIO_000068: ncbigi

position:9197267:1
position: 9197267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9195452-9195937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9196545-9196622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9196751-9196862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9196964-9197109:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9197205-9197267:1:exon

FAM197Y7
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: FAM197Y7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9207466..9213071)
location: region:9207466-9213071:-1
so has part: feature:9207466-9213071:-1:exon

100287826
type: Gene
SIO_000068: ncbigene

37469
type: HGNC
SIO_000068: hgnc

position:9207466:-1
position: 9207466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9213071:-1
position: 9213071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9207466-9213071:-1:exon

FAM197Y7
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: FAM197Y7
product: family with sequence similarity 197, Y-linked, member 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 13% coverage by RNAseq alignments
transcript id: XR_246945.1
SIO_010081: FAM197Y7
so part of: FAM197Y7
location: complement(join(9207466..9207525,9211075..9211233,9212738..9212883,9212970..9213071))
location: region:9207466-9213071:-1
so has part: feature:9212970-9213071:-1:exon
so has part: feature:9212738-9212883:-1:exon
so has part: feature:9211075-9211233:-1:exon
so has part: feature:9207466-9207525:-1:exon

GI:530427648
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:9212970-9213071:-1:exon

position:9212970:-1
position: 9212970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9212738-9212883:-1:exon

position:9212738:-1
position: 9212738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9212883:-1
position: 9212883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9211075-9211233:-1:exon

position:9211075:-1
position: 9211075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9211233:-1
position: 9211233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9207466-9207525:-1:exon

position:9207525:-1
position: 9207525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSPY7P
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: TSPYP7
gene: TSPY7P
gene synonym: TSPYP7
note: testis specific protein, Y-linked 7, pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 9215685..9218480
location: region:9215685-9218480:1
so has part: feature:9215685-9218480:1:exon

653288
type: Gene
SIO_000068: ncbigene

34040
type: HGNC
SIO_000068: hgnc

position:9215685:1
position: 9215685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9218480:1
position: 9218480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9215685-9218480:1:exon

TSPY7P
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
alternative label: TSPYP7
gene: TSPY7P
gene synonym: TSPYP7
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: TSPY7P
subclass of: SO_0000673
so part of: TSPY7P
location: 9215685..9216215
location: region:9215685-9216215:1
so has part: feature:9215685-9216215:1:exon

position:9216215:1
position: 9216215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9215685-9216215:1:exon

TSPY3
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: TSPY3
note: testis specific protein, Y-linked 3; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 9236030..9238827
location: region:9236030-9238827:1
so has part: feature:9236030-9238827:1:exon
subclass of: SO_0000010

728137
type: Gene
SIO_000068: ncbigene

33876
type: HGNC
SIO_000068: hgnc

position:9236030:1
position: 9236030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9238827:1
position: 9238827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9236030-9238827:1:exon

TSPY3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
gene: TSPY3
product: testis specific protein, Y-linked 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001077697.2
SIO_010081: TSPY3
subclass of: SO_0000673
so part of: TSPY3
location: join(9236030..9236561,9237169..9237246,9237375..9237486,9237588..9237733,9237840..9237921,9238616..9238826)
location: region:9236030-9238826:1
so has part: feature:9236030-9236561:1:exon
so has part: feature:9237169-9237246:1:exon
so has part: feature:9237375-9237486:1:exon
so has part: feature:9237588-9237733:1:exon
so has part: feature:9237840-9237921:1:exon
so has part: feature:9238616-9238826:1:exon

GI:303228329
type: GI
SIO_000068: ncbigi

position:9238826:1
position: 9238826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9236030-9236561:1:exon

position:9236561:1
position: 9236561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9237169-9237246:1:exon

position:9237169:1
position: 9237169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9237246:1
position: 9237246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9237375-9237486:1:exon

position:9237375:1
position: 9237375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9237486:1
position: 9237486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9237588-9237733:1:exon

position:9237588:1
position: 9237588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9237733:1
position: 9237733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9237840-9237921:1:exon

position:9237840:1
position: 9237840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9237921:1
position: 9237921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9238616-9238826:1:exon

position:9238616:1
position: 9238616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPY3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
gene: TSPY3
product: testis specific protein, Y-linked 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 30 Proteins, and 100% coverage by RNAseq alignments, including 3 samples with support for all introns
transcript id: XM_005272742.1
SIO_010081: TSPY3
subclass of: SO_0000673
so part of: TSPY3
location: join(9236055..9236561,9237169..9237246,9237375..9237486,9237588..9237733,9237829..9237921,9238616..9238827)
location: region:9236055-9238827:1
so has part: feature:9236055-9236561:1:exon
so has part: feature:9237169-9237246:1:exon
so has part: feature:9237375-9237486:1:exon
so has part: feature:9237588-9237733:1:exon
so has part: feature:9237829-9237921:1:exon
so has part: feature:9238616-9238827:1:exon

GI:530427642
type: GI
SIO_000068: ncbigi

position:9236055:1
position: 9236055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9236055-9236561:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9237169-9237246:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9237375-9237486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9237588-9237733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9237829-9237921:1:exon

position:9237829:1
position: 9237829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9238616-9238827:1:exon

TSPY3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
gene: TSPY3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: testis-specific Y-encoded protein 3
translation: MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS
SIO_010081: TSPY3
subclass of: SO_0000673
so part of: TSPY3
location: join(9236076..9236561,9237169..9237246,9237375..9237486,9237588..9237733,9237840..9237921,9238616..9238638)
location: region:9236076-9238638:1
so has part: feature:9236076-9236561:1:exon
so has part: feature:9237169-9237246:1:exon
so has part: feature:9237375-9237486:1:exon
so has part: feature:9237588-9237733:1:exon
so has part: feature:9237840-9237921:1:exon
so has part: feature:9238616-9238638:1:exon

NP_001071165.2
type: Protein
SIO_000068: ncbiprotein

GI:303228330
type: GI
SIO_000068: ncbigi

CCDS48204.1
type: CCDS
SIO_000068: ccds

position:9236076:1
position: 9236076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9238638:1
position: 9238638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9236076-9236561:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9237169-9237246:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9237375-9237486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9237588-9237733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9237840-9237921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9238616-9238638:1:exon

TSPY3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
gene: TSPY3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 3 isoform X1
translation: MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAESPDRSYVRTCGAIPCNTTRG
SIO_010081: TSPY3
subclass of: SO_0000673
so part of: TSPY3
location: join(9236076..9236561,9237169..9237246,9237375..9237486,9237588..9237733,9237829..9237891)
location: region:9236076-9237891:1
so has part: feature:9236076-9236561:1:exon
so has part: feature:9237169-9237246:1:exon
so has part: feature:9237375-9237486:1:exon
so has part: feature:9237588-9237733:1:exon
so has part: feature:9237829-9237891:1:exon

XP_005272799.1
type: Protein
SIO_000068: ncbiprotein

GI:530427643
type: GI
SIO_000068: ncbigi

position:9237891:1
position: 9237891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9236076-9236561:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9237169-9237246:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9237375-9237486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9237588-9237733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9237829-9237891:1:exon

FAM197Y5
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: FAM197Y5
note: family with sequence similarity 197, Y-linked, member 5; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(9296352..9301954)
location: region:9296352-9301954:-1
so has part: feature:9296352-9301954:-1:exon

100289150
type: Gene
SIO_000068: ncbigene

37467
type: HGNC
SIO_000068: hgnc

position:9296352:-1
position: 9296352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9301954:-1
position: 9301954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9296352-9301954:-1:exon

FAM197Y5
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: FAM197Y5
product: family with sequence similarity 197, Y-linked, member 5
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_046300.1
SIO_010081: FAM197Y5
so part of: FAM197Y5
location: complement(join(9296352..9296411,9299967..9300125,9301621..9301766,9301853..9301954))
location: region:9296352-9301954:-1
so has part: feature:9301853-9301954:-1:exon
so has part: feature:9301621-9301766:-1:exon
so has part: feature:9299967-9300125:-1:exon
so has part: feature:9296352-9296411:-1:exon

GI:374858037
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:9301853-9301954:-1:exon

position:9301853:-1
position: 9301853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9301621-9301766:-1:exon

position:9301621:-1
position: 9301621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9301766:-1
position: 9301766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9299967-9300125:-1:exon

position:9299967:-1
position: 9299967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9300125:-1
position: 9300125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9296352-9296411:-1:exon

position:9296411:-1
position: 9296411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSPY1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CT78
alternative label: DYS14
alternative label: pJA923
alternative label: TSPY
gene: TSPY1
gene synonym: CT78; DYS14; pJA923; TSPY
note: testis specific protein, Y-linked 1; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 9304564..9307359
location: region:9304564-9307359:1
so has part: feature:9304564-9307359:1:exon
subclass of: SO_0000010

7258
type: Gene
SIO_000068: ncbigene

12381
type: HGNC
SIO_000068: hgnc

480100
type: OMIM
SIO_000068: omim

position:9304564:1
position: 9304564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9307359:1
position: 9307359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9304564-9307359:1:exon

TSPY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CT78
alternative label: DYS14
alternative label: pJA923
alternative label: TSPY
gene: TSPY1
gene synonym: CT78; DYS14; pJA923; TSPY
product: testis specific protein, Y-linked 1, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001197242.1
SIO_010081: TSPY1
subclass of: SO_0000673
so part of: TSPY1
location: join(9304564..9305095,9305703..9305780,9305909..9306020,9306122..9306267,9306363..9306455,9307148..9307358)
location: region:9304564-9307358:1
so has part: feature:9304564-9305095:1:exon
so has part: feature:9305703-9305780:1:exon
so has part: feature:9305909-9306020:1:exon
so has part: feature:9306122-9306267:1:exon
so has part: feature:9306363-9306455:1:exon
so has part: feature:9307148-9307358:1:exon

GI:308522757
type: GI
SIO_000068: ncbigi

position:9307358:1
position: 9307358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9304564-9305095:1:exon

position:9305095:1
position: 9305095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9305703-9305780:1:exon

position:9305703:1
position: 9305703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9305780:1
position: 9305780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9305909-9306020:1:exon

position:9305909:1
position: 9305909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9306020:1
position: 9306020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9306122-9306267:1:exon

position:9306122:1
position: 9306122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9306267:1
position: 9306267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9306363-9306455:1:exon

position:9306363:1
position: 9306363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9306455:1
position: 9306455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9307148-9307358:1:exon

position:9307148:1
position: 9307148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CT78
alternative label: DYS14
alternative label: pJA923
alternative label: TSPY
gene: TSPY1
gene synonym: CT78; DYS14; pJA923; TSPY
product: testis specific protein, Y-linked 1, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_003308.3
SIO_010081: TSPY1
subclass of: SO_0000673
so part of: TSPY1
location: join(9304564..9305095,9305703..9305780,9305909..9306020,9306122..9306267,9306374..9306455,9307148..9307358)
location: region:9304564-9307358:1
so has part: feature:9304564-9305095:1:exon
so has part: feature:9305703-9305780:1:exon
so has part: feature:9305909-9306020:1:exon
so has part: feature:9306122-9306267:1:exon
so has part: feature:9306374-9306455:1:exon
so has part: feature:9307148-9307358:1:exon

GI:139948459
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:9304564-9305095:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9305703-9305780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9305909-9306020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9306122-9306267:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9306374-9306455:1:exon

position:9306374:1
position: 9306374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9307148-9307358:1:exon

TSPY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CT78
alternative label: DYS14
alternative label: pJA923
alternative label: TSPY
gene: TSPY1
gene synonym: CT78; DYS14; pJA923; TSPY
product: testis specific protein, Y-linked 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein, and 95% coverage by RNAseq alignments
transcript id: XM_005262567.1
SIO_010081: TSPY1
subclass of: SO_0000673
so part of: TSPY1
location: join(9304570..9304696,9304958..9305095,9305703..9305780,9305909..9306020,9306122..9306267,9306374..9306455,9307148..9307359)
location: region:9304570-9307359:1
so has part: feature:9304570-9304696:1:exon
so has part: feature:9304958-9305095:1:exon
so has part: feature:9305703-9305780:1:exon
so has part: feature:9305909-9306020:1:exon
so has part: feature:9306122-9306267:1:exon
so has part: feature:9306374-9306455:1:exon
so has part: feature:9307148-9307359:1:exon

GI:530426505
type: GI
SIO_000068: ncbigi

position:9304570:1
position: 9304570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9304570-9304696:1:exon

position:9304696:1
position: 9304696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9304958-9305095:1:exon

position:9304958:1
position: 9304958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9305703-9305780:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9305909-9306020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9306122-9306267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9306374-9306455:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9307148-9307359:1:exon

TSPY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CT78
alternative label: DYS14
alternative label: pJA923
alternative label: TSPY
gene: TSPY1
gene synonym: CT78; DYS14; pJA923; TSPY
note: isoform TSPY-L is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: testis-specific Y-encoded protein 1 isoform TSPY-L
translation: MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS
SIO_010081: TSPY1
subclass of: SO_0000673
so part of: TSPY1
location: join(9304610..9305095,9305703..9305780,9305909..9306020,9306122..9306267,9306374..9306455,9307148..9307170)
location: region:9304610-9307170:1
so has part: feature:9304610-9305095:1:exon
so has part: feature:9305703-9305780:1:exon
so has part: feature:9305909-9306020:1:exon
so has part: feature:9306122-9306267:1:exon
so has part: feature:9306374-9306455:1:exon
so has part: feature:9307148-9307170:1:exon

NP_003299.2
type: Protein
SIO_000068: ncbiprotein

GI:139948460
type: GI
SIO_000068: ncbigi

CCDS48205.1
type: CCDS
SIO_000068: ccds

position:9304610:1
position: 9304610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9307170:1
position: 9307170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9304610-9305095:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9305703-9305780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9305909-9306020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9306122-9306267:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9306374-9306455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9307148-9307170:1:exon

TSPY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CT78
alternative label: DYS14
alternative label: pJA923
alternative label: TSPY
gene: TSPY1
gene synonym: CT78; DYS14; pJA923; TSPY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1 isoform X1
translation: MRPEGSLTYRVPERLRQGFCGVGRAAQALVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS
SIO_010081: TSPY1
subclass of: SO_0000673
so part of: TSPY1
location: join(9304610..9304696,9304958..9305095,9305703..9305780,9305909..9306020,9306122..9306267,9306374..9306455,9307148..9307170)
location: region:9304610-9307170:1
so has part: feature:9304610-9304696:1:exon
so has part: feature:9304958-9305095:1:exon
so has part: feature:9305703-9305780:1:exon
so has part: feature:9305909-9306020:1:exon
so has part: feature:9306122-9306267:1:exon
so has part: feature:9306374-9306455:1:exon
so has part: feature:9307148-9307170:1:exon

XP_005262624.1
type: Protein
SIO_000068: ncbiprotein

GI:530426506
type: GI
SIO_000068: ncbigi

urn:…
SIO_000300: 1
SIO_000628: feature:9304610-9304696:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9304958-9305095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9305703-9305780:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9305909-9306020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9306122-9306267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9306374-9306455:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9307148-9307170:1:exon

TSPY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CT78
alternative label: DYS14
alternative label: pJA923
alternative label: TSPY
gene: TSPY1
gene synonym: CT78; DYS14; pJA923; TSPY
note: isoform TSPY-S is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: testis-specific Y-encoded protein 1 isoform TSPY-S
translation: MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAESPDRSYVRTCGAIPCNTTRG
SIO_010081: TSPY1
subclass of: SO_0000673
so part of: TSPY1
location: join(9304610..9305095,9305703..9305780,9305909..9306020,9306122..9306267,9306363..9306425)
location: region:9304610-9306425:1
so has part: feature:9304610-9305095:1:exon
so has part: feature:9305703-9305780:1:exon
so has part: feature:9305909-9306020:1:exon
so has part: feature:9306122-9306267:1:exon
so has part: feature:9306363-9306425:1:exon

NP_001184171.1
type: Protein
SIO_000068: ncbiprotein

GI:308522758
type: GI
SIO_000068: ncbigi

position:9306425:1
position: 9306425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9304610-9305095:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9305703-9305780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9305909-9306020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9306122-9306267:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9306363-9306425:1:exon

FAM197Y4
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: FAM197Y4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9314594..9322482)
location: region:9314594-9322482:-1
so has part: feature:9314594-9322482:-1:exon

100289188
type: Gene
SIO_000068: ncbigene

37466
type: HGNC
SIO_000068: hgnc

position:9314594:-1
position: 9314594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9322482:-1
position: 9322482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9314594-9322482:-1:exon

FAM197Y4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: FAM197Y4
product: family with sequence similarity 197, Y-linked, member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 52% coverage by RNAseq alignments
transcript id: XR_244576.1
SIO_010081: FAM197Y4
so part of: FAM197Y4
location: complement(join(9314594..9316721,9320273..9320358,9322162..9322271,9322468..9322482))
location: region:9314594-9322482:-1
so has part: feature:9322468-9322482:-1:exon
so has part: feature:9322162-9322271:-1:exon
so has part: feature:9320273-9320358:-1:exon
so has part: feature:9314594-9316721:-1:exon

GI:530426507
type: GI
SIO_000068: ncbigi