Index of /rdf/edgestore/update/EdgeStore/local/src/bioperl/BioPerl-1.6.1/t/data/


../
biodbgff/                                          29-Sep-2009 16:33                   -
codeml_lysozyme/                                   29-Sep-2009 16:33                   -
consed_project/                                    29-Sep-2009 16:33                   -
dbfa/                                              29-Sep-2009 16:33                   -
dbqual/                                            29-Sep-2009 16:33                   -
eutils/                                            29-Sep-2009 16:33                   -
fastq/                                             29-Sep-2009 16:33                   -
map_hem/                                           29-Sep-2009 16:33                   -
registry/                                          29-Sep-2009 16:33                   -
seqfeaturedb/                                      29-Sep-2009 16:33                   -
taxdump/                                           29-Sep-2009 16:33                   -
transfac_pro/                                      29-Sep-2009 16:33                   -
13-pilE-F.scf                                      29-Sep-2009 16:33              187046
1A11.pdb                                           29-Sep-2009 16:33              326268
1A3I.pdb                                           29-Sep-2009 16:33               36774
1BPT.pdb                                           29-Sep-2009 16:33               48762
1ZZ19XR301R-Alignment.tblastn                      29-Sep-2009 16:33             1980068
2008.blasttable                                    29-Sep-2009 16:33                 670
503384.MEGABLAST.0                                 29-Sep-2009 16:33                1002
503384.MEGABLAST.2                                 29-Sep-2009 16:33               33771
5X_1895.FASTXY                                     29-Sep-2009 16:33               76371
8HVP.pdb                                           29-Sep-2009 16:33              150984
AAC12660.fa                                        29-Sep-2009 16:33                 561
AB077698.gb                                        29-Sep-2009 16:33                7473
AE003528_ecoli.bls                                 29-Sep-2009 16:33                8068
AE003644_Adh-genomic.gb                            29-Sep-2009 16:33              363286
AF032047.gbk                                       29-Sep-2009 16:33                2542
AF165282.gb                                        29-Sep-2009 16:33                3088
AF305198.gb                                        29-Sep-2009 16:33                3753
AHCYL1.kegg                                        29-Sep-2009 16:33                3775
ATF14F8.gbk                                        29-Sep-2009 16:33              180554
AY095303S1.gbk                                     29-Sep-2009 16:33                7132
AY763288.gb                                        29-Sep-2009 16:33                3377
AnnIX-v003.gbk                                     29-Sep-2009 16:33               24552
BAB68554.gb                                        29-Sep-2009 16:33                1813
BC000007.gbk                                       29-Sep-2009 16:33                7068
BEL16-LTR_AG.embl                                  29-Sep-2009 16:33                1411
BK000016-tpa.gbk                                   29-Sep-2009 16:33                4001
BLOSUM50                                           29-Sep-2009 16:33                2122
BN000066-tpa.embl                                  29-Sep-2009 16:33               15572
BOSS_DROME.FASTP_v35_04                            29-Sep-2009 16:33                6087
Bird_Ovomucoids.nex                                29-Sep-2009 16:33               15145
CG11099.fasaln                                     29-Sep-2009 16:33                8063
CG2865.fasaln                                      29-Sep-2009 16:33                7991
D10483.gbk                                         29-Sep-2009 16:33              252800
D12555.gbk                                         29-Sep-2009 16:33                1918
DQ018368.gb                                        29-Sep-2009 16:33                3019
ECAPAH02.embl                                      29-Sep-2009 16:33              246524
ENr111.mfa.example.elems                           29-Sep-2009 16:33                 543
GO.defs.test                                       29-Sep-2009 16:33                1607
GO.defs.test2                                      29-Sep-2009 16:33                 944
Genscan.FastA                                      29-Sep-2009 16:33                1117
Glimmer2.out                                       29-Sep-2009 16:33               22470
Glimmer3.detail                                    29-Sep-2009 16:33               13427
Glimmer3.predict                                   29-Sep-2009 16:33                1088
GlimmerHMM.out                                     29-Sep-2009 16:33               11277
GlimmerM.out                                       29-Sep-2009 16:33                2075
HUMBETGLOA.FASTA                                   29-Sep-2009 16:33              144675
HUMBETGLOA.fa                                      29-Sep-2009 16:33                3117
HUMBETGLOA.gff                                     29-Sep-2009 16:33                 380
HUMBETGLOA.grail                                   29-Sep-2009 16:33                5000
HUMBETGLOA.grailexp                                29-Sep-2009 16:33                2080
HUMBETGLOA.mzef                                    29-Sep-2009 16:33                 429
HUMBETGLOA.tblastx                                 29-Sep-2009 16:33               11333
Kingdoms_DNA.nex                                   29-Sep-2009 16:33              102329
L77119.hmmer                                       29-Sep-2009 16:33                2471
LOAD_Ccd1.dnd                                      29-Sep-2009 16:33                 809
LittleChrY.dbsnp.xml                               29-Sep-2009 16:33               16748
M0.mlc                                             29-Sep-2009 16:33                6530
M12730.gb                                          29-Sep-2009 16:33                6614
MSGEFTUA.gb                                        29-Sep-2009 16:33                5291
Mcjanrna_rdbII.gbk                                 29-Sep-2009 16:33                3021
MmCT                                               29-Sep-2009 16:33                3940
NC_001284.gbk                                      29-Sep-2009 16:33              604326
NC_006346.gb                                       29-Sep-2009 16:33                2895
NC_006511-short.gbk                                29-Sep-2009 16:33                6339
NC_008536.gb                                       29-Sep-2009 16:33               11599
NM_002254.gb                                       29-Sep-2009 16:33               10385
NT_021877.gbk                                      29-Sep-2009 16:33               16510
O_sat.wgs                                          29-Sep-2009 16:33                6191
P33897                                             29-Sep-2009 16:33               28890
P35527.gb                                          29-Sep-2009 16:33               14348
P39765.gb                                          29-Sep-2009 16:33               19690
PAM250                                             29-Sep-2009 16:33                2068
Primate_mtDNA.nex                                  29-Sep-2009 16:33               31326
Q8GBD3.swiss                                       29-Sep-2009 16:33                2175
Rab1.chaos-xml                                     29-Sep-2009 16:33               20211
SPAN_Family4nl.nex                                 29-Sep-2009 16:33               31312
SPAN_Family7n.nex                                  29-Sep-2009 16:33              113964
SPAN_Family8a.nex                                  29-Sep-2009 16:33               10585
SwissProt.dat                                      29-Sep-2009 16:33                2063
T7.aln                                             29-Sep-2009 16:33               21454
Treebase-chlamy-dna.nex                            29-Sep-2009 16:33               14735
U58726.gb                                          29-Sep-2009 16:33               55455
U71225.gb                                          29-Sep-2009 16:33                3189
U83300.bsml                                        29-Sep-2009 16:33                4316
UnaSmithHIV-both.nex                               29-Sep-2009 16:33               95062
X98338_Adh-mRNA.gb                                 29-Sep-2009 16:33                5724
a_thaliana.blastn                                  29-Sep-2009 16:33               15630
aaml.mlc                                           29-Sep-2009 16:33                3670
aaml_pairwise.mlc                                  29-Sep-2009 16:33                3253
acefile.ace.1                                      29-Sep-2009 16:33              341980
acefile.singlets                                   29-Sep-2009 16:33               67580
adh.mb_tree.nexus                                  29-Sep-2009 16:33               17058
alleles.fas                                        29-Sep-2009 16:33                 174
alnfile.fasta                                      29-Sep-2009 16:33                 294
amino.fa                                           29-Sep-2009 16:33                 446
ar.embl                                            29-Sep-2009 16:33                7664
assembly_with_singlets.ace                         29-Sep-2009 16:33               28589
atp1.matrix                                        29-Sep-2009 16:33               82659
ay007676.gb                                        29-Sep-2009 16:33                3434
ay116458.gb                                        29-Sep-2009 16:33                2327
ay149291.gb                                        29-Sep-2009 16:33                2206
barns-combined.nex                                 29-Sep-2009 16:33               65011
baseml.pairwise                                    29-Sep-2009 16:33                 929
baseml.usertree                                    29-Sep-2009 16:33                1209
basic-bush.nex                                     29-Sep-2009 16:33                 448
basic-ladder.nex                                   29-Sep-2009 16:33                 438
biofpc.cor                                         29-Sep-2009 16:33               19544
biofpc.fpc                                         29-Sep-2009 16:33               78279
bl2seq.blastn                                      29-Sep-2009 16:33                1487
bl2seq.blastn.rev                                  29-Sep-2009 16:33                1270
bl2seq.blastx.out                                  29-Sep-2009 16:33                2899
bl2seq.bug940.out                                  29-Sep-2009 16:33                6327
bl2seq.out                                         29-Sep-2009 16:33                2219
bl2seq.tblastx.out                                 29-Sep-2009 16:33               13790
blast.report                                       29-Sep-2009 16:33               22211
blast_no_hit_desc.txt                              29-Sep-2009 16:33                1318
blastp2215.blast                                   29-Sep-2009 16:33                7042
blat.psLayout3                                     29-Sep-2009 16:33                 637
blosum62.bla                                       29-Sep-2009 16:33                2072
bootstrap.tre                                      29-Sep-2009 16:33                  32
branchSite.mlc                                     29-Sep-2009 16:33                5529
brassica_ATH.WUBLASTN                              29-Sep-2009 16:33                8893
bug1986.blast2                                     29-Sep-2009 16:33               47696
bug1986.blastp                                     29-Sep-2009 16:33                5059
bug2120.phd                                        29-Sep-2009 16:33               13984
bug2246.blast                                      29-Sep-2009 16:33                1793
bug2391.megablast                                  29-Sep-2009 16:33                1261
bug2399.tblastn                                    29-Sep-2009 16:33               41767
bug2453.maf                                        29-Sep-2009 16:33                1136
bug2473.fasta                                      29-Sep-2009 16:33                2206
bug2862.pmr                                        29-Sep-2009 16:33               11676
c200-vs-yeast.BLASTN                               29-Sep-2009 16:33               21507
c200-vs-yeast.BLASTN.m8                            29-Sep-2009 16:33                 732
calm.swiss                                         29-Sep-2009 16:33               12611
catalase-webblast.BLASTP                           29-Sep-2009 16:33               21968
cds-266.fas                                        29-Sep-2009 16:33               15377
cds_sample.embl                                    29-Sep-2009 16:33                1518
chad100.scf                                        29-Sep-2009 16:33               80606
char-interleave.nex                                29-Sep-2009 16:33                 548
char-matrix-spaces.nex                             29-Sep-2009 16:33                 496
codeml.mlc                                         29-Sep-2009 16:33               13018
codeml315.mlc                                      29-Sep-2009 16:33                6080
codeml4.mlc                                        29-Sep-2009 16:33               20202
codeml_nssites.mlc                                 29-Sep-2009 16:33               22148
compLD_missingtest.prettybase                      29-Sep-2009 16:33                 851
compLD_test.prettybase                             29-Sep-2009 16:33                 302
component.ontology.test                            29-Sep-2009 16:33                2591
component.ontology.test2                           29-Sep-2009 16:33                 442
contig-by-hand.wublastp                            29-Sep-2009 16:33                5487
contigspectrumtest.asm                             29-Sep-2009 16:33                3443
crab.dat.cn                                        29-Sep-2009 16:33                 959
crab.nj                                            29-Sep-2009 16:33                 908
crab.njb                                           29-Sep-2009 16:33                1146
crypto.sim4-0                                      29-Sep-2009 16:33                 117
crypto.sim4-3                                      29-Sep-2009 16:33                 930
crypto.sim4-4                                      29-Sep-2009 16:33                1152
ctgdemo.fpc                                        29-Sep-2009 16:33              185044
cys1_dicdi.water                                   29-Sep-2009 16:33                5973
cysprot.fa                                         29-Sep-2009 16:33                2516
cysprot.msf                                        29-Sep-2009 16:33                4476
cysprot.needle                                     29-Sep-2009 16:33                2183
cysprot.tblastn                                    29-Sep-2009 16:33               23066
cysprot.water                                      29-Sep-2009 16:33                2177
cysprot1.FASTA                                     29-Sep-2009 16:33               13870
cysprot1.fa                                        29-Sep-2009 16:33                 360
cysprot1a.fa                                       29-Sep-2009 16:33                1097
cysprot1a.msf                                      29-Sep-2009 16:33                1931
cysprot1b.fa                                       29-Sep-2009 16:33                1418
cysprot1b.hmmsearch                                29-Sep-2009 16:33                8627
cysprot1b.msf                                      29-Sep-2009 16:33                2469
cysprot1b.newick                                   29-Sep-2009 16:33                  93
cysprot_vs_gadfly.FASTA                            29-Sep-2009 16:33               42909
dcr1_sp.WUBLASTP                                   29-Sep-2009 16:33              124825
directives.gff3                                    29-Sep-2009 16:33                 126
dmel_2Lchunk.gb                                    29-Sep-2009 16:33               29270
dna1.fa                                            29-Sep-2009 16:33                 220
dna2.fa                                            29-Sep-2009 16:33                 581
dnaE-bsub-prot.fa                                  29-Sep-2009 16:33                 650
dnaE-bsub.fa                                       29-Sep-2009 16:33                2117
dnaEbsub_ecoli.wublastx                            29-Sep-2009 16:33                6127
dnaEbsub_ecoli.wutblastn                           29-Sep-2009 16:33                4428
dnaEbsub_ecoli.wutblastx                           29-Sep-2009 16:33                8487
dq519393.gb                                        29-Sep-2009 16:33                2364
echofilter.wublastn                                29-Sep-2009 16:33               14320
ecoli-trna-qrna.out                                29-Sep-2009 16:33               26165
ecoli_domains.rps.xml                              29-Sep-2009 16:33               35302
ecoli_domains.rpsblast                             29-Sep-2009 16:33                5840
ecolitst.bls                                       29-Sep-2009 16:33               11275
ecolitst.fa                                        29-Sep-2009 16:33                 932
ecolitst.noseqs.wublastp                           29-Sep-2009 16:33                3151
ecolitst.wublastp                                  29-Sep-2009 16:33               13047
empty.bl2seq                                       29-Sep-2009 16:33                 645
entrezgene.dat                                     29-Sep-2009 16:33              743010
example.hap                                        29-Sep-2009 16:33               16737
example.phase                                      29-Sep-2009 16:33                 111
exonerate.output.dontwork                          29-Sep-2009 16:33                3283
exonerate.output.works                             29-Sep-2009 16:33                6056
expected.blast.out                                 29-Sep-2009 16:33                1802
exsignalp.out                                      29-Sep-2009 16:33                6466
factor7.embl                                       29-Sep-2009 16:33               21446
fgenesh.out                                        29-Sep-2009 16:33                3640
footprinter.out                                    29-Sep-2009 16:33               14410
frac_problems.blast                                29-Sep-2009 16:33               21114
frac_problems2.blast                               29-Sep-2009 16:33               10923
frac_problems3.blast                               29-Sep-2009 16:33                6583
geneid_1.0.out                                     29-Sep-2009 16:33                1833
genemark-fragment.out                              29-Sep-2009 16:33                 518
genemark.out                                       29-Sep-2009 16:33                6774
genewise.out                                       29-Sep-2009 16:33               15953
genewise_output.paracel_btk                        29-Sep-2009 16:33                5193
genomewise.out                                     29-Sep-2009 16:33                 333
genomic-seq.epcr                                   29-Sep-2009 16:33                 571
genomic-seq.fasta                                  29-Sep-2009 16:33              171524
genomic-seq.genscan                                29-Sep-2009 16:33               12795
genomic-seq.mzef                                   29-Sep-2009 16:33                1772
gf-s71.needle                                      29-Sep-2009 16:33                2826
glimmer3-fragment.detail                           29-Sep-2009 16:33                4371
glimmer3-fragment.predict                          29-Sep-2009 16:33                 285
gmap_f9-multiple_results.txt                       29-Sep-2009 16:33             2848296
gmap_f9-reverse-strand.txt                         29-Sep-2009 16:33              180568
gmap_f9.txt                                        29-Sep-2009 16:33              177605
headerless.psl                                     29-Sep-2009 16:33                 435
hemoglobinA.meg                                    29-Sep-2009 16:33                1391
hg16_chroms.gff                                    29-Sep-2009 16:33                1553
hmmpfam.out                                        29-Sep-2009 16:33                1977
hmmpfam_cs.out                                     29-Sep-2009 16:33               29028
hmmpfam_fake.out                                   29-Sep-2009 16:33                2712
hmmsearch.out                                      29-Sep-2009 16:33              152396
hs_est.est2genome                                  29-Sep-2009 16:33                 970
hs_fugu.newick                                     29-Sep-2009 16:33                  58
hs_owlmonkey.aln                                   29-Sep-2009 16:33                 821
hs_owlmonkey.fas                                   29-Sep-2009 16:33                 387
hs_owlmonkey.fasta                                 29-Sep-2009 16:33                 416
hsinsulin.blastcl3.blastn                          29-Sep-2009 16:33               19197
humor.maf                                          29-Sep-2009 16:33               33913
humts1.pal                                         29-Sep-2009 16:33                2030
hybrid1.gff3                                       29-Sep-2009 16:33                 533
hybrid2.gff3                                       29-Sep-2009 16:33                 525
in.fasta                                           29-Sep-2009 16:33                2056
insulin.water                                      29-Sep-2009 16:33                1481
interpro_ebi.xml                                   29-Sep-2009 16:33                1683
interpro_short.xml                                 29-Sep-2009 16:33               33750
intrablock-comment.nex                             29-Sep-2009 16:33                 547
knownGene.gff3                                     29-Sep-2009 16:33                1470
little.largemultifasta                             29-Sep-2009 16:33                1086
long-names.nex                                     29-Sep-2009 16:33                 615
longnames.aln                                      29-Sep-2009 16:33                8483
longnames.dnd                                      29-Sep-2009 16:33                 405
lucy.info                                          29-Sep-2009 16:33                  65
lucy.qual                                          29-Sep-2009 16:33                2752
lucy.seq                                           29-Sep-2009 16:33                1109
lucy.stderr                                        29-Sep-2009 16:33                  64
lysozyme6.protml                                   29-Sep-2009 16:33                8937
lysozyme6.simple.protml                            29-Sep-2009 16:33                 296
mapmaker.out                                       29-Sep-2009 16:33                1490
mapmaker.txt                                       29-Sep-2009 16:33                 508
mast.dat                                           29-Sep-2009 16:33              167175
masta.dat                                          29-Sep-2009 16:33                2011
match.output                                       29-Sep-2009 16:33              986958
megablast_output.paracel_btk                       29-Sep-2009 16:33                4000
meme.dat                                           29-Sep-2009 16:33               22246
mini-AE001405.gb                                   29-Sep-2009 16:33                3038
mini-align.aln                                     29-Sep-2009 16:33                 355
mixedmast.dat                                      29-Sep-2009 16:33              112490
mpath.ontology.test                                29-Sep-2009 16:33                4550
multi.phd                                          29-Sep-2009 16:33               15255
multi_1.fa                                         29-Sep-2009 16:33                 911
multi_2.fa                                         29-Sep-2009 16:33                 911
multi_blast.bls                                    29-Sep-2009 16:33              107694
multifa.seq                                        29-Sep-2009 16:33                 703
multifa.seq.qual                                   29-Sep-2009 16:33                1739
multiline-intrablock-comment.nex                   29-Sep-2009 16:33                 590
multiseq.bls                                       29-Sep-2009 16:33               13868
mus.bls.xml                                        29-Sep-2009 16:33               27692
mutations.dat                                      29-Sep-2009 16:33               12924
mutations.old.dat                                  29-Sep-2009 16:33               12924
mutations.old.xml                                  29-Sep-2009 16:33               17209
mutations.xml                                      29-Sep-2009 16:33               17195
myco_sites.gff                                     29-Sep-2009 16:33               45164
nei_gojobori_test.aln                              29-Sep-2009 16:33                 537
neighbor.dist                                      29-Sep-2009 16:33                 129
new_blastn.txt                                     29-Sep-2009 16:33                5208
newblast.xml                                       29-Sep-2009 16:33              103266
no-genes.genscan                                   29-Sep-2009 16:33                 467
no_FH.embl                                         29-Sep-2009 16:33               14368
no_cds_example.gb                                  29-Sep-2009 16:33               18517
no_hsps.blastp                                     29-Sep-2009 16:33               35592
no_semicolon.newick                                29-Sep-2009 16:33                  57
noninterleaved.phy                                 29-Sep-2009 16:33                1602
nucmatrix.txt                                      29-Sep-2009 16:33                 234
omim_genemap_test                                  29-Sep-2009 16:33               15903
omim_genemap_test_nolinebreak                      29-Sep-2009 16:33               15902
omim_text_test                                     29-Sep-2009 16:33                3414
pep-266.aln                                        29-Sep-2009 16:33                8483
pfam_tests.stk                                     29-Sep-2009 16:33               15018
phi.out                                            29-Sep-2009 16:33               14234
phipsi.out                                         29-Sep-2009 16:33              184937
phylipdist-36.out                                  29-Sep-2009 16:33               12759
phylipdist.out                                     29-Sep-2009 16:33                 301
phyloxml_examples.xml                              29-Sep-2009 16:33               15268
pictogram.fa                                       29-Sep-2009 16:33                 224
plague_yeast.bls.xml                               29-Sep-2009 16:33               19914
polymorphism.dat                                   29-Sep-2009 16:33                2564
polymorphism.old.xml                               29-Sep-2009 16:33                3513
polymorphism.xml                                   29-Sep-2009 16:33                3512
popgen_saureus.dat                                 29-Sep-2009 16:33                 588
popgen_saureus.multidat                            29-Sep-2009 16:33                1299
popstats.prettybase                                29-Sep-2009 16:33                 274
pre_rel9.swiss                                     29-Sep-2009 16:33                9063
primedseq.fa                                       29-Sep-2009 16:33                 220
primer3_infile.txt                                 29-Sep-2009 16:33                2475
primer3_outfile.txt                                29-Sep-2009 16:33                4873
primer3_output.txt                                 29-Sep-2009 16:33               10777
prints.out                                         29-Sep-2009 16:33               27198
promoterwise.out                                   29-Sep-2009 16:33                 775
protpars.phy                                       29-Sep-2009 16:33               21357
protpars_longid.phy                                29-Sep-2009 16:33                 443
pseudowise.out                                     29-Sep-2009 16:33                 289
psi_xml.dat                                        29-Sep-2009 16:33                4100
psiblast.xml                                       29-Sep-2009 16:33               85970
psiblastreport.out                                 29-Sep-2009 16:33              347612
purine_v081.infernal                               29-Sep-2009 16:33                9942
puzzle.tre                                         29-Sep-2009 16:33                 331
qrna-relloc.out                                    29-Sep-2009 16:33                2961
qualfile.qual                                      29-Sep-2009 16:33               15726
quoted-strings1.nex                                29-Sep-2009 16:33                 469
quoted-strings2.nex                                29-Sep-2009 16:33                 469
radical-whitespace.nex                             29-Sep-2009 16:33                 841
radical-whitespace_02.nex                          29-Sep-2009 16:33                 863
rebase.itype2                                      29-Sep-2009 16:33                 990
rebase.withrefm                                    29-Sep-2009 16:33               10405
regulation_test.obo                                29-Sep-2009 16:33                7580
rel9.swiss                                         29-Sep-2009 16:33                9100
repeatmasker.fa.out                                29-Sep-2009 16:33                 414
revcomp_mrna.gb                                    29-Sep-2009 16:33               92443
rfam_tests.stk                                     29-Sep-2009 16:33               22534
roa1.dat                                           29-Sep-2009 16:33               22984
roa1.genbank                                       29-Sep-2009 16:33                4322
roa1.swiss                                         29-Sep-2009 16:33               12559
roa1_v2.dat                                        29-Sep-2009 16:33                4551
rpsblast.bls                                       29-Sep-2009 16:33                5675
sample_dataset.tasm                                29-Sep-2009 16:33               67331
sbay_c127.fas                                      29-Sep-2009 16:33                 752
sbay_c545-yeast.BLASTZ.PSL                         29-Sep-2009 16:33               11819
seg.out                                            29-Sep-2009 16:33                 198
semicolon.newick                                   29-Sep-2009 16:33                  58
seqdatabase.ini                                    29-Sep-2009 16:33                 300
seqfile.pir                                        29-Sep-2009 16:33                1114
seqs.fas                                           29-Sep-2009 16:33                 911
sequencefamily.dat                                 29-Sep-2009 16:33               37876
short.blx                                          29-Sep-2009 16:33               15558
signalp.hmm.short                                  29-Sep-2009 16:33                 466
signalp.hmm.summary                                29-Sep-2009 16:33                3302
signalp.negative.out                               29-Sep-2009 16:33                6648
signalp.nn.short                                   29-Sep-2009 16:33                 923
signalp.nn.summary                                 29-Sep-2009 16:33                4511
signalp.positive.out                               29-Sep-2009 16:33                6724
signalp.short                                      29-Sep-2009 16:33                1405
signalp.summary                                    29-Sep-2009 16:33                6486
sim4.for.for                                       29-Sep-2009 16:33                 362
sim4.for.rev                                       29-Sep-2009 16:33                 198
sim4.rev                                           29-Sep-2009 16:33                 423
singleNSsite.mlc                                   29-Sep-2009 16:33                6865
so.obo                                             29-Sep-2009 16:33              220907
sofa.ontology                                      29-Sep-2009 16:33                3978
spaces.nex                                         29-Sep-2009 16:33                 469
sparsealn.needle                                   29-Sep-2009 16:33                1614
spidey.noalignment                                 29-Sep-2009 16:33                 154
spidey.test1                                       29-Sep-2009 16:33                6187
sprintf.rnamotif                                   29-Sep-2009 16:33               44302
ssp160.embl.1                                      29-Sep-2009 16:33                8998
stress_test_medline.xml                            29-Sep-2009 16:33               37766
stress_test_pubmed.xml                             29-Sep-2009 16:33               15130
sv40_small.xml                                     29-Sep-2009 16:33               19728
swiss.dat                                          29-Sep-2009 16:33               37876
swisspfam.data                                     29-Sep-2009 16:33                1119
tab1part.mif                                       29-Sep-2009 16:33                6846
tab2part.mif                                       29-Sep-2009 16:33                 234
tab3part.mif                                       29-Sep-2009 16:33                1648
tandem_repeats_finder.dat                          29-Sep-2009 16:33                 629
tandem_repeats_finder.noresults                    29-Sep-2009 16:33                 200
targetp.out                                        29-Sep-2009 16:33                1933
tblastn.out                                        29-Sep-2009 16:33                2849
test 2.txt                                         29-Sep-2009 16:33                 573
test.abi                                           29-Sep-2009 16:33              159873
test.ace                                           29-Sep-2009 16:33                1141
test.ctf                                           29-Sep-2009 16:33               43985
test.embl                                          29-Sep-2009 16:33               13576
test.embl2sq                                       29-Sep-2009 16:33               13583
test.exp                                           29-Sep-2009 16:33                4584
test.fasta                                         29-Sep-2009 16:33                 804
test.game                                          29-Sep-2009 16:33               45268
test.gcg                                           29-Sep-2009 16:33                 593
test.gcgblast                                      29-Sep-2009 16:33                3801
test.gcgfasta                                      29-Sep-2009 16:33               11212
test.genbank                                       29-Sep-2009 16:33               15971
test.genbank.noseq                                 29-Sep-2009 16:33               10044
test.infernal                                      29-Sep-2009 16:33                8334
test.interpro                                      29-Sep-2009 16:33               11267
test.interpro-go.xml                               29-Sep-2009 16:33                6727
test.lasergene                                     29-Sep-2009 16:33                 888
test.locuslink                                     29-Sep-2009 16:33                8086
test.mase                                          29-Sep-2009 16:33               14118
test.meme                                          29-Sep-2009 16:33               22246
test.meme2                                         29-Sep-2009 16:33               19462
test.metafasta                                     29-Sep-2009 16:33                 217
test.nh                                            29-Sep-2009 16:33                 107
test.nhx                                           29-Sep-2009 16:33                 408
test.pfam                                          29-Sep-2009 16:33                4294
test.phd                                           29-Sep-2009 16:33                7803
test.pir                                           29-Sep-2009 16:33                 802
test.pln                                           29-Sep-2009 16:33                1125
test.ptt                                           29-Sep-2009 16:33               26162
test.raw                                           29-Sep-2009 16:33                 518
test.swiss                                         29-Sep-2009 16:33                2845
test.tab                                           29-Sep-2009 16:33                 740
test.tigrxml                                       29-Sep-2009 16:33                3226
test.tseq                                          29-Sep-2009 16:33                6363
test.tsv                                           29-Sep-2009 16:33               30240
test.txt                                           29-Sep-2009 16:33                 573
test.waba                                          29-Sep-2009 16:33               53875
test.xls                                           29-Sep-2009 16:33               47616
test.ztr                                           29-Sep-2009 16:33               30251
test1.blasttab3                                    29-Sep-2009 16:33                 896
test1.wublastp                                     29-Sep-2009 16:33                3255
test2.infernal                                     29-Sep-2009 16:33                3028
test2.raw                                          29-Sep-2009 16:33                 365
test_badlf.gcg                                     29-Sep-2009 16:33                 371
test_clear_range.fastq                             29-Sep-2009 16:33                  88
testaln.aln                                        29-Sep-2009 16:33                4296
testaln.arp                                        29-Sep-2009 16:33               25837
testaln.fasta                                      29-Sep-2009 16:33                4649
testaln.list                                       29-Sep-2009 16:33                  57
testaln.mase                                       29-Sep-2009 16:33                1003
testaln.metafasta                                  29-Sep-2009 16:33                 145
testaln.msf                                        29-Sep-2009 16:33                7252
testaln.nexus                                      29-Sep-2009 16:33                 555
testaln.pfam                                       29-Sep-2009 16:33                4208
testaln.phylip                                     29-Sep-2009 16:33                 259
testaln.po                                         29-Sep-2009 16:33               12505
testaln.prodom                                     29-Sep-2009 16:33                4653
testaln.psi                                        29-Sep-2009 16:33               66201
testaln.selex                                      29-Sep-2009 16:33                4580
testaln.stockholm                                  29-Sep-2009 16:33               19929
testaln.xmfa                                       29-Sep-2009 16:33                2163
testaln2.arp                                       29-Sep-2009 16:33                1155
testaln2.fasta                                     29-Sep-2009 16:33                6342
testdat.exonerate                                  29-Sep-2009 16:33                3167
testdata.crossmatch                                29-Sep-2009 16:33                4282
testdbaccnums.out                                  29-Sep-2009 16:33               14206
testfile.erpin                                     29-Sep-2009 16:33                 852
testfuzzy.genbank                                  29-Sep-2009 16:33                3379
tmhmm.out                                          29-Sep-2009 16:33                 549
tmp.fst                                            29-Sep-2009 16:33                 600
traits.tab                                         29-Sep-2009 16:33                 386
traittree.nexus                                    29-Sep-2009 16:33                 212
transfac.dat                                       29-Sep-2009 16:33                2403
tree_nonewline.nexus                               29-Sep-2009 16:33                 287
tricky.wublast                                     29-Sep-2009 16:33                3034
trna.strict.rnamotif                               29-Sep-2009 16:33               19953
unigene.data                                       29-Sep-2009 16:33                8562
urease.tre.nexus                                   29-Sep-2009 16:33                1067
vecscreen_simple.test_output                       29-Sep-2009 16:33                 941
version2.scf                                       29-Sep-2009 16:33              126453
version3.scf                                       29-Sep-2009 16:33              126454
withrefm.906                                       29-Sep-2009 16:33             2462145
worm_fam_2785.cdna                                 29-Sep-2009 16:33                4351
yeast.tRNAscanSE                                   29-Sep-2009 16:33               13554
yn00.mlc                                           29-Sep-2009 16:33                5901