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reaction: 288879
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species: 248043
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reaction: 296858
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product: 808982
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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product: 897340
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kinetic law: 897352

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251382
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name: M_H_H

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species: 233794

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name: M_1_Acyl_sn_glycero_3_phosphoglycerol__n_C140__C20H40O9P1

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292958
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product: 855644
reactant: 855632
notes: GENE_ASSOCIATION: b0756 PROTEIN_ASSOCIATION: GalM SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 5.1.3.3
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reversible: false
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species: 248703

248703
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name: M_D_Galactose_C6H12O6

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name: M_beta_D_Galactose_C6H12O6

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name: M_Aminoacetone_C3H8NO

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initial concentration: NaN
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251102
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boundary condition: false
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initial concentration: NaN
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name: M_H2_H2

302877
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reversible: false
reactant: 922495
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product: 922532

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255982
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278140
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product: 764722
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notes: GENE_ASSOCIATION: ( b1732 or b3942 ) PROTEIN_ASSOCIATION: ( KatE ) or ( KatG ) SUBSYSTEM: S_Unassigned PROTEIN_CLASS: 1.11.1.6
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277100
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notes: GENE_ASSOCIATION: b3433 PROTEIN_ASSOCIATION: Asd SUBSYSTEM: S_Threonine_and_Lysine_Metabolism PROTEIN_CLASS: 1.2.1.11
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product: 758047
reactant: 757999
reactant: 758023
product: 758035

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name: M_Phosphate_HO4P

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species: 237904

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name: M_4_Phospho_L_aspartate_C4H6NO7P

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initial concentration: NaN
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name: M_N_Acetylneuraminate_C11H18NO9

308457
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product: 962258
reactant: 962245
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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name: R_3_phenylpropionate_transport_via_diffusion__extracellular_to_periplasm_

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species: 259202

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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Phenylpropanoate_C9H9O2

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species: 259182

259182
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initial concentration: NaN
initial amount: NaN
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name: M_Phenylpropanoate_C9H9O2

294858
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reactant: 868034
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product: 868070
reversible: false
product: 868058
reactant: 868046
kinetic law: 868082
notes: GENE_ASSOCIATION: ( b2979 and b4467 and b4468 ) PROTEIN_ASSOCIATION: GlcDEF SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:

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species: 250462

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initial concentration: NaN
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name: M_Glycolate_C2H3O3

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initial concentration: NaN
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name: M_Menaquinol_8_C51H74O2

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species: 250062

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name: M_Glyoxylate_C2H1O3

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initial concentration: NaN
initial amount: NaN
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initial concentration: NaN
initial amount: NaN
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name: M_D_Allose_C6H12O6

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initial concentration: NaN
initial amount: NaN
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name: M__2_3_Dihydroxybenzoyl_adenylate_C17H17N5O10P

309197
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product: 966893
reversible: false
notes: GENE_ASSOCIATION: b2585 PROTEIN_ASSOCIATION: PssA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 2.7.8.8
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reactant: 966869
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reactant: 966881
product: 966917

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299658
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product: 897991
reactant: 897967
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reactant: 897955
kinetic law: 898015
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notes: GENE_ASSOCIATION: b0494 PROTEIN_ASSOCIATION: TesA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.5

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species: 251382

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species: 233894

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name: M_1_Acyl_sn_glycero_3_phosphoglycerol__n_C181__C24H46O9P1

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species: 256882

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294918
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kinetic law: 868397
product: 868385
reactant: 868373
notes: GENE_ASSOCIATION: ( s0001 or b3927 ) PROTEIN_ASSOCIATION: ( SPONTANEOUS ) or ( GlpF ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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name: R_glycerol_transport_via_channel__periplasm_

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value: 0.0

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species: 250442

250442
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Glycerol_C3H8O3

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species: 250422

250422
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name: M_Sulfur_S

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298958
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product: 893383
reactant: 893371
kinetic law: 893407
notes: GENE_ASSOCIATION: b0343 PROTEIN_ASSOCIATION: LacY SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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fast: false

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species: 253282

253282
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Lactose_C12H22O11

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species: 253322

253322
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initial concentration: NaN
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name: M_Lactose_C12H22O11

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species: 251382

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initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Formaldehyde_CH2O

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initial amount: NaN
in compartment: 233014
name: M_Thymidine_C10H14N2O5

243663
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_coprogen_unloaded__no_Fe_III___C35H52N6O13

248563
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Glucose_6_phosphate_C6H11O9P

235594
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Dehydropantoate_C6H9O4

243383
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Co2_Co

285179
type: Reaction
kinetic law: 809577
product: 809565
reactant: 809553
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Citrate_exchange

809637
type: LocalParameter
value: -0.072222

809625
type: LocalParameter
units: 716537
value: 0.0

809613
type: LocalParameter
value: 0.0

809601
type: LocalParameter
units: 716537
value: 999999.0

809589
type: LocalParameter
units: 716537
value: 0.0

809565
type: SpeciesReference
stoichiometry: 1.0
species: 266161

266161
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Citrate_C6H5O7

809553
type: SpeciesReference
stoichiometry: 1.0
species: 242943

242943
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Citrate_C6H5O7

275040
type: Reaction
kinetic law: 745189
product: 745177
reactant: 745165
notes: GENE_ASSOCIATION: b3619 PROTEIN_ASSOCIATION: RfaD SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS: 5.1.3.20
fast: false
reversible: false
name: R_ADP_D_glycero_D_manno_heptose_epimerase

745250
type: LocalParameter
value: -0.283871

745238
type: LocalParameter
units: 716537
value: 0.0

745225
type: LocalParameter
value: 0.0

745213
type: LocalParameter
units: 716537
value: 999999.0

745201
type: LocalParameter
units: 716537
value: 0.0

745177
type: SpeciesReference
stoichiometry: 1.0
species: 239863

239863
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

745165
type: SpeciesReference
stoichiometry: 1.0
species: 239843

239843
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

234354
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_2__3__Cyclic_UMP_C9H10N2O8P

261381
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Thiocyanate_CNS

248063
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Farnesyl_diphosphate_C15H25O7P2

250222
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Glycine_betaine_C5H11NO2

284179
type: Reaction
kinetic law: 804729
product: 804717
reactant: 804705
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_3_hydroxycinnamic_acid_exchange

804790
type: LocalParameter
value: -0.115354

804778
type: LocalParameter
units: 716537
value: 0.0

804766
type: LocalParameter
value: 0.0

804754
type: LocalParameter
units: 716537
value: 999999.0

804742
type: LocalParameter
units: 716537
value: 0.0

804717
type: SpeciesReference
stoichiometry: 1.0
species: 265101

265101
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_3_hydroxycinnamic_acid_C9H7O3

804705
type: SpeciesReference
stoichiometry: 1.0
species: 236714

236714
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_3_hydroxycinnamic_acid_C9H7O3

259661
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Pyridoxamine_C8H13N2O2

303597
type: Reaction
notes: GENE_ASSOCIATION: ( b4374 or b2744 ) PROTEIN_ASSOCIATION: ( YjjG ) or ( SurE ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.3.5
kinetic law: 929063
name: R_5__nucleotidase__UMP_
product: 929051
reversible: false
reactant: 929015
product: 929039
reactant: 929027
fast: false

929123
type: LocalParameter
value: -0.004012

929111
type: LocalParameter
units: 716537
value: 0.0

929099
type: LocalParameter
value: 0.0

929087
type: LocalParameter
units: 716537
value: 999999.0

929075
type: LocalParameter
units: 716537
value: 0.0

929051
type: SpeciesReference
stoichiometry: 1.0
species: 264181

264181
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Uridine_C9H12N2O6

929015
type: SpeciesReference
stoichiometry: 1.0
species: 251222

929039
type: SpeciesReference
stoichiometry: 1.0
species: 258902

929027
type: SpeciesReference
stoichiometry: 1.0
species: 263861

263861
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_UMP_C9H11N2O9P

234994
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_2_Acyl_sn_glycero_3_phosphoethanolamine__n_C181__C23H46NO7P1

236834
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

285899
type: Reaction
kinetic law: 813063
product: 813051
reactant: 813039
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Enterochelin_exchange

813123
type: LocalParameter
value: 0.0

813111
type: LocalParameter
units: 716537
value: 0.0

813099
type: LocalParameter
value: 0.0

813087
type: LocalParameter
units: 716537
value: 999999.0

813075
type: LocalParameter
units: 716537
value: 0.0

813051
type: SpeciesReference
stoichiometry: 1.0
species: 266881

266881
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Enterochelin_C30H27N3O15

813039
type: SpeciesReference
stoichiometry: 1.0
species: 246743

246743
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Enterochelin_C30H27N3O15

270700
type: Reaction
notes: GENE_ASSOCIATION: b4213 PROTEIN_ASSOCIATION: CpdB SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.4.16
name: R_2__3__cyclic_nucleotide_phosphodiesterase__AMP___periplasm_
product: 718786
product: 718799
reversible: false
kinetic law: 718812
reactant: 718774
reactant: 718761
fast: false

718786
type: SpeciesReference
stoichiometry: 1.0
species: 236394

236394
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_3__AMP_C10H12N5O7P

718799
type: SpeciesReference
stoichiometry: 1.0
species: 251382

718872
type: LocalParameter
value: 0.0

718860
type: LocalParameter
units: 716537
value: 0.0

718848
type: LocalParameter
value: 0.0

718836
type: LocalParameter
units: 716537
value: 999999.0

718824
type: LocalParameter
units: 716537
value: 0.0

718774
type: SpeciesReference
stoichiometry: 1.0
species: 251262

718761
type: SpeciesReference
stoichiometry: 1.0
species: 234234

234234
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_2__3__Cyclic_AMP_C10H11N5O6P

305857
type: Reaction
reactant: 945301
notes: GENE_ASSOCIATION: b2320 PROTEIN_ASSOCIATION: PdxB SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
reversible: true
fast: false
product: 945337
kinetic law: 945361
product: 945349
name: R_Erythronate_4_phosphate__4per__dehydrogenase
reactant: 945313
product: 945325

945301
type: SpeciesReference
stoichiometry: 1.0
species: 237923

237923
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_4_Phospho_D_erythronate_C4H6O8P

945337
type: SpeciesReference
stoichiometry: 1.0
species: 255962

945422
type: LocalParameter
value: 0.0

945410
type: LocalParameter
units: 716537
value: 1.64E-4

945398
type: LocalParameter
value: 0.0

945386
type: LocalParameter
units: 716537
value: 999999.0

945373
type: LocalParameter
units: 716537
value: -999999.0

945349
type: SpeciesReference
stoichiometry: 1.0
species: 257042

257042
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Oxo_3_hydroxy_4_phosphobutanoate_C4H4O8P

945313
type: SpeciesReference
stoichiometry: 1.0
species: 255942

945325
type: SpeciesReference
stoichiometry: 1.0
species: 251342

293178
type: Reaction
product: 856946
reversible: false
reactant: 856934
reactant: 856922
name: R_D_Glucosamine_6_phosphate_transport_via_phosphate_antiport__periplasm_
kinetic law: 856970
notes: GENE_ASSOCIATION: b3666 PROTEIN_ASSOCIATION: UhpT SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
product: 856958
fast: false

856946
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stoichiometry: 1.0
species: 249042

249042
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Glucosamine_6_phosphate_C6H13NO8P

856934
type: SpeciesReference
stoichiometry: 1.0
species: 249082

249082
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_D_Glucosamine_6_phosphate_C6H13NO8P

856922
type: SpeciesReference
stoichiometry: 2.0
species: 258902

857030
type: LocalParameter
value: 0.0

857018
type: LocalParameter
units: 716537
value: 0.0

857006
type: LocalParameter
value: 0.0

856994
type: LocalParameter
units: 716537
value: 999999.0

856982
type: LocalParameter
units: 716537
value: 0.0

856958
type: SpeciesReference
stoichiometry: 2.0
species: 258942

258942
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Phosphate_HO4P

269281
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Ammonium_H4N

281139
type: Reaction
reversible: false
kinetic law: 786463
product: 786438
fast: false
product: 786451
notes: GENE_ASSOCIATION: ( b2601 or b0754 or b1704 ) PROTEIN_ASSOCIATION: ( AroF ) or ( AroGec ) or ( AroH ) SUBSYSTEM: S_Tyrosine__Tryptophan__and_Phenylalanine_Metabolism PROTEIN_CLASS: 4.1.2.15
name: R_3_deoxy_D_arabino_heptulosonate_7_phosphate_synthetase
reactant: 786402
reactant: 786414
reactant: 786426

786525
type: LocalParameter
value: 0.0

786513
type: LocalParameter
units: 716537
value: 0.273872

786500
type: LocalParameter
value: 0.0

786488
type: LocalParameter
units: 716537
value: 999999.0

786475
type: LocalParameter
units: 716537
value: 0.0

786438
type: SpeciesReference
stoichiometry: 1.0
species: 235374

235374
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Dehydro_3_deoxy_D_arabino_heptonate_7_phosphate_C7H10O10P

786451
type: SpeciesReference
stoichiometry: 1.0
species: 258902

786402
type: SpeciesReference
stoichiometry: 1.0
species: 246543

246543
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Erythrose_4_phosphate_C4H7O7P

786414
type: SpeciesReference
stoichiometry: 1.0
species: 251222

786426
type: SpeciesReference
stoichiometry: 1.0
species: 258062

258062
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Phosphoenolpyruvate_C3H2O6P

259161
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Protoporphyrinogen_IX_C34H38N4O4

303837
type: Reaction
kinetic law: 931003
product: 930979
fast: false
notes: GENE_ASSOCIATION: ( b0650 or b4161 ) PROTEIN_ASSOCIATION: ( HscC ) or ( YjeQ ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.6.1.15
product: 930967
product: 930991
reversible: false
reactant: 930955
reactant: 930943
name: R_nucleoside_triphosphatase__ATP_

931063
type: LocalParameter
value: -0.004012

931051
type: LocalParameter
units: 716537
value: 0.0

931039
type: LocalParameter
value: 0.0

931027
type: LocalParameter
units: 716537
value: 999999.0

931015
type: LocalParameter
units: 716537
value: 0.0

930979
type: SpeciesReference
stoichiometry: 1.0
species: 251342

930967
type: SpeciesReference
stoichiometry: 1.0
species: 239803

239803
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_ADP_C10H12N5O10P2

930991
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stoichiometry: 1.0
species: 258902

930955
type: SpeciesReference
stoichiometry: 1.0
species: 251222

930943
type: SpeciesReference
stoichiometry: 1.0
species: 241883

241883
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_ATP_C10H12N5O13P3

294898
type: Reaction
kinetic law: 868301
product: 868289
reactant: 868277
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_glycerol_transport_via_diffusion__extracellular_to_periplasm_

868361
type: LocalParameter
value: 0.0

868349
type: LocalParameter
units: 716537
value: 0.0

868337
type: LocalParameter
value: 0.0

868325
type: LocalParameter
units: 716537
value: 999999.0

868313
type: LocalParameter
units: 716537
value: -999999.0

868289
type: SpeciesReference
stoichiometry: 1.0
species: 250442

868277
type: SpeciesReference
stoichiometry: 1.0
species: 250423

250423
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Glycerol_C3H8O3

276560
type: Reaction
product: 754572
reactant: 754560
notes: GENE_ASSOCIATION: b0776 PROTEIN_ASSOCIATION: BioF SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.3.1.47
product: 754597
name: R_8_amino_7_oxononanoate_synthase
reversible: true
reactant: 754548
product: 754585
kinetic law: 754609
reactant: 754536
fast: false

754572
type: SpeciesReference
stoichiometry: 1.0
species: 238283

238283
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_8_Amino_7_oxononanoate_C9H17NO3

754560
type: SpeciesReference
stoichiometry: 1.0
species: 258962

258962
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Pimeloyl_CoA_C28H41N7O19P3S

754597
type: SpeciesReference
stoichiometry: 1.0
species: 243343

243343
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Coenzyme_A_C21H32N7O16P3S

754548
type: SpeciesReference
stoichiometry: 1.0
species: 251342

754585
type: SpeciesReference
stoichiometry: 1.0
species: 243283

243283
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_CO2_CO2

754669
type: LocalParameter
value: 0.0

754657
type: LocalParameter
units: 716537
value: 0.0

754645
type: LocalParameter
value: 0.0

754633
type: LocalParameter
units: 716537
value: 999999.0

754621
type: LocalParameter
units: 716537
value: -999999.0

754536
type: SpeciesReference
stoichiometry: 1.0
species: 240283

240283
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Alanine_C3H7NO2

282199
type: Reaction
product: 793056
name: R_Dihydroneopterin_triphosphate_pyrophosphatase
product: 793032
reversible: false
notes: GENE_ASSOCIATION: ( b1865 or b0099 ) PROTEIN_ASSOCIATION: ( NtpA ) or ( MutT ) SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
reactant: 793007
reactant: 793019
fast: false
kinetic law: 793068
product: 793044

793056
type: SpeciesReference
stoichiometry: 1.0
species: 259141

259141
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Diphosphate_HO7P2

793032
type: SpeciesReference
stoichiometry: 1.0
species: 245403

245403
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Dihydroneopterin_monophosphate_C9H12N5O7P

793007
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stoichiometry: 1.0
species: 240043

240043
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Amino_4_hydroxy_6__erythro_1_2_3_trihydroxypropyl_dihydropteridine_triphosphate_C9H12N5O13P3

793019
type: SpeciesReference
stoichiometry: 1.0
species: 251222

793128
type: LocalParameter
value: 0.0

793116
type: LocalParameter
units: 716537
value: 4.93E-4

793104
type: LocalParameter
value: 0.0

793092
type: LocalParameter
units: 716537
value: 999999.0

793080
type: LocalParameter
units: 716537
value: 0.0

793044
type: SpeciesReference
stoichiometry: 1.0
species: 251342

260541
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_N_Succinyl_2_L_amino_6_oxoheptanedioate_C11H12NO8

266961
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Fructose_6_phosphate_C6H11O9P

267301
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Fucose_C6H12O5

291659
type: Reaction
reactant: 846600
name: R_flavin_reductase__NAD_
product: 846648
reactant: 846624
product: 846636
notes: GENE_ASSOCIATION: b3844 PROTEIN_ASSOCIATION: Fre SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 1.5.1.30
reactant: 846612
reversible: false
kinetic law: 846660
fast: false

846600
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stoichiometry: 1.0
species: 251342

846648
type: SpeciesReference
stoichiometry: 1.0
species: 259901

259901
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Reduced_riboflavin_C17H22N4O6

846624
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stoichiometry: 1.0
species: 260001

260001
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Riboflavin_C17H20N4O6

846636
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stoichiometry: 1.0
species: 255942

846612
type: SpeciesReference
stoichiometry: 1.0
species: 255962

846720
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846672
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units: 716537
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288879
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kinetic law: 827491
product: 827479
reactant: 827467
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_alpha_D_Ribose_5_phosphate_exchange

827551
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827539
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units: 716537
value: 0.0

827527
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827515
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units: 716537
value: 999999.0

827503
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units: 716537
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827479
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species: 269821

269821
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_alpha_D_Ribose_5_phosphate_C5H9O8P

827467
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species: 259861

259861
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_alpha_D_Ribose_5_phosphate_C5H9O8P

242023
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Biotin_C10H15N2O3S

284599
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kinetic law: 806769
product: 806757
reactant: 806745
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Adenosine_exchange

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806817
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value: 0.0

806805
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806793
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806781
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units: 716537
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806757
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species: 265581

265581
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Adenosine_C10H13N5O4

806745
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species: 239663

239663
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Adenosine_C10H13N5O4

256762
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

275660
type: Reaction
reactant: 748953
notes: GENE_ASSOCIATION: b4208 PROTEIN_ASSOCIATION: CycAec SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
reactant: 748940
reversible: false
fast: false
name: R_L_alanine_transport_in_via_proton_symport__periplasm_
product: 748977
product: 748965
kinetic law: 748989

748953
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species: 251382

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species: 240323

240323
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_L_Alanine_C3H7NO2

748977
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species: 251342

748965
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species: 240283

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749037
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749025
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749013
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units: 716537
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749001
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units: 716537
value: 0.0

294938
type: Reaction
kinetic law: 868530
product: 868506
notes: GENE_ASSOCIATION: b3926 PROTEIN_ASSOCIATION: GlpK SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 2.7.1.30
fast: false
name: R_glycerol_kinase
product: 868518
reactant: 868470
product: 868494
reactant: 868482
reversible: false

868591
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value: 0.0

868578
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units: 716537
value: 0.0

868566
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868554
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units: 716537
value: 999999.0

868542
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units: 716537
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868506
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species: 250302

250302
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Glycerol_3_phosphate_C3H7O6P

868518
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stoichiometry: 1.0
species: 251342

868470
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species: 241883

868494
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species: 239803

868482
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species: 250422

281339
type: Reaction
name: R_2_3_dihydro_2_3_dihydroxybenzoate_dehydrogenase
kinetic law: 787669
reversible: true
product: 787657
product: 787633
reactant: 787621
product: 787645
reactant: 787608
notes: GENE_ASSOCIATION: b0596 PROTEIN_ASSOCIATION: EntA SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 1.3.1.28
fast: false

787730
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787718
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units: 716537
value: 0.0

787705
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787693
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units: 716537
value: 999999.0

787681
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units: 716537
value: -999999.0

787657
type: SpeciesReference
stoichiometry: 1.0
species: 255962

787633
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species: 234454

234454
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_3_Dihydroxybenzoate_C7H5O4

787621
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stoichiometry: 1.0
species: 255942

787645
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stoichiometry: 1.0
species: 251342

787608
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stoichiometry: 1.0
species: 234434

234434
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_3_Dihydro_2_3_dihydroxybenzoate_C7H7O4

285219
type: Reaction
kinetic law: 809775
product: 809762
reactant: 809749
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_CMP_exchange

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value: -0.147453

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units: 716537
value: 0.0

809814
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809801
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units: 716537
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809788
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units: 716537
value: 0.0

809762
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stoichiometry: 1.0
species: 266201

266201
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_CMP_C9H12N3O8P

809749
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stoichiometry: 1.0
species: 243243

243243
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_CMP_C9H12N3O8P

264081
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Urate_C5H4N4O3

311537
type: Reaction
name: R_succinate_transport_out_via_proton_antiport__periplasm_
product: 981489
kinetic law: 981513
reversible: false
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
reactant: 981465
reactant: 981477
product: 981501
fast: false

981489
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stoichiometry: 1.0
species: 251342

981573
type: LocalParameter
value: -0.003009

981561
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units: 716537
value: 0.0

981549
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value: 0.0

981537
type: LocalParameter
units: 716537
value: 999999.0

981525
type: LocalParameter
units: 716537
value: 0.0

981465
type: SpeciesReference
stoichiometry: 1.0
species: 260841

260841
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Succinate_C4H4O4

981477
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stoichiometry: 1.0
species: 251382

981501
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stoichiometry: 1.0
species: 260881

260881
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Succinate_C4H4O4

261361
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Thiocyanate_CNS

248043
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_5_Formamido_1__5_phospho_D_ribosyl_imidazole_4_carboxamide_C10H13N4O9P

303118
type: Reaction
product: 925343
kinetic law: 925367
product: 925355
name: R_nicotinamide_nucleotide_amidase
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 3.5.1.42
reactant: 925331
reactant: 925319
fast: false
reversible: false

925343
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stoichiometry: 1.0
species: 256042

256042
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Ammonium_H4N

925427
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value: -0.008025

925415
type: LocalParameter
units: 716537
value: 0.0

925403
type: LocalParameter
value: 0.0

925391
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units: 716537
value: 999999.0

925379
type: LocalParameter
units: 716537
value: 0.0

925355
type: SpeciesReference
stoichiometry: 1.0
species: 256162

256162
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Nicotinate_D_ribonucleotide_C11H12NO9P

925331
type: SpeciesReference
stoichiometry: 1.0
species: 256182

256182
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_NMN_C11H14N2O8P

925319
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stoichiometry: 1.0
species: 251222

252202
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Hypoxanthine_C5H4N4O

291758
type: Reaction
reactant: 847592
kinetic law: 847628
fast: false
reactant: 847579
name: R_fumarate_reductase
notes: GENE_ASSOCIATION: ( b4151 and b4152 and b4153 and b4154 ) PROTEIN_ASSOCIATION: Frd SUBSYSTEM: S_Citric_Acid_Cycle PROTEIN_CLASS: 1.3.99.1
product: 847616
product: 847604
reversible: false

847592
type: SpeciesReference
stoichiometry: 1.0
species: 255302

847688
type: LocalParameter
value: 0.0

847676
type: LocalParameter
units: 716537
value: 0.243693

847664
type: LocalParameter
value: 0.0

847652
type: LocalParameter
units: 716537
value: 999999.0

847640
type: LocalParameter
units: 716537
value: 0.0

847579
type: SpeciesReference
stoichiometry: 1.0
species: 248302

248302
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Fumarate_C4H2O4

847616
type: SpeciesReference
stoichiometry: 1.0
species: 260841

847604
type: SpeciesReference
stoichiometry: 1.0
species: 255322

237364
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

305137
type: Reaction
name: R_phenylacetaldehyde_reversible_transport_via_proton_symport__periplasm_
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
fast: false
product: 940532
reactant: 940496
reversible: true
reactant: 940508
product: 940520
kinetic law: 940544

940532
type: SpeciesReference
stoichiometry: 1.0
species: 257562

257562
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Phenylacetaldehyde_C8H8O

940496
type: SpeciesReference
stoichiometry: 1.0
species: 251382

940508
type: SpeciesReference
stoichiometry: 1.0
species: 257602

940520
type: SpeciesReference
stoichiometry: 1.0
species: 251342

940604
type: LocalParameter
value: 0.0

940592
type: LocalParameter
units: 716537
value: 0.0

940580
type: LocalParameter
value: 0.0

940568
type: LocalParameter
units: 716537
value: 999999.0

940556
type: LocalParameter
units: 716537
value: -999999.0

296858
type: Reaction
name: R_histidinol_dehydrogenase
notes: GENE_ASSOCIATION: b2020 PROTEIN_ASSOCIATION: HisD SUBSYSTEM: S_Histidine_Metabolism PROTEIN_CLASS: 1.1.1.23
kinetic law: 880472
product: 880436
product: 880448
reactant: 880412
product: 880460
reactant: 880424
reversible: false
fast: false
reactant: 880400

880533
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880520
type: LocalParameter
units: 716537
value: 0.069795

880508
type: LocalParameter
value: 0.0

880496
type: LocalParameter
units: 716537
value: 999999.0

880484
type: LocalParameter
units: 716537
value: 0.0

880436
type: SpeciesReference
stoichiometry: 3.0
species: 251342

880448
type: SpeciesReference
stoichiometry: 1.0
species: 251762

251762
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Histidine_C6H9N3O2

880412
type: SpeciesReference
stoichiometry: 1.0
species: 251842

251842
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Histidinol_C6H12N3O

880460
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stoichiometry: 2.0
species: 255962

880424
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stoichiometry: 2.0
species: 255942

880400
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species: 251222

262162
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Trehalose_C12H22O11

258702
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_L_Phenylalanine_C9H11NO2

296198
type: Reaction
kinetic law: 876298
product: 876286
reactant: 876274
notes: GENE_ASSOCIATION: s0001 PROTEIN_ASSOCIATION: SPONTANEOUS SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
fast: false
reversible: true
name: R_hydrogen_transport_diffusion__periplasm_

876359
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value: 0.0

876347
type: LocalParameter
units: 716537
value: 0.0

876335
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value: 0.0

876323
type: LocalParameter
units: 716537
value: 999999.0

876311
type: LocalParameter
units: 716537
value: -999999.0

876286
type: SpeciesReference
stoichiometry: 1.0
species: 251082

251082
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_H2_H2

876274
type: SpeciesReference
stoichiometry: 1.0
species: 251122

251122
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_H2_H2

253942
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Maltose_6__phosphate_C12H21O14P

241563
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Ascorbate_C6H8O6

260121
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Sedoheptulose_7_phosphate_C7H13O10P

305197
type: Reaction
product: 940937
reactant: 940864
product: 940913
reversible: false
fast: false
kinetic law: 940949
product: 940925
product: 940901
notes: GENE_ASSOCIATION: b0133 PROTEIN_ASSOCIATION: PanCec SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 6.3.2.1
name: R_pantothenate_synthase
reactant: 940876
reactant: 940888

940937
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stoichiometry: 1.0
species: 259141

940864
type: SpeciesReference
stoichiometry: 1.0
species: 240163

240163
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_beta_Alanine_C3H7NO2

940913
type: SpeciesReference
stoichiometry: 1.0
species: 251342

941010
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value: 0.0

940998
type: LocalParameter
units: 716537
value: 4.24E-4

940986
type: LocalParameter
value: 0.0

940974
type: LocalParameter
units: 716537
value: 999999.0

940962
type: LocalParameter
units: 716537
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940925
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species: 258982

258982
type: Species
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M__R__Pantothenate_C9H16NO5

940901
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species: 240703

240703
type: Species
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_AMP_C10H12N5O7P

940876
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stoichiometry: 1.0
species: 241883

940888
type: SpeciesReference
stoichiometry: 1.0
species: 257662

257662
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M__R__Pantoate_C6H11O4

270860
type: Reaction
kinetic law: 719618
product: 719606
reactant: 719594
notes: GENE_ASSOCIATION: b2835 PROTEIN_ASSOCIATION: LplT SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
fast: false
reversible: false
name: R_2_Acyl_sn_glycero_3_phosphatidate__n_C180__transporter_via_facilitated_diffusion__periplasm_

719678
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719666
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units: 716537
value: 0.0

719654
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719642
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units: 716537
value: 999999.0

719630
type: LocalParameter
units: 716537
value: 0.0

719606
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stoichiometry: 1.0
species: 235974

235974
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_octadecanoyl_sn_glycerol_3_phosphate_C21H42O7P1

719594
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species: 235994

235994
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_2_octadecanoyl_sn_glycerol_3_phosphate_C21H42O7P1

245623
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dITP_C10H11N4O13P3

296438
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product: 877814
name: R_HCO3_equilibration_reaction
reactant: 877778
notes: GENE_ASSOCIATION: ( b0339 or b0126 ) PROTEIN_ASSOCIATION: ( CynT ) or ( YadF ) SUBSYSTEM: S_Unassigned PROTEIN_CLASS: 4.2.1.1
kinetic law: 877826
fast: false
reversible: true
reactant: 877790
product: 877802

877814
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stoichiometry: 1.0
species: 251423

251423
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Bicarbonate_CHO3

877778
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stoichiometry: 1.0
species: 243283

877886
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value: 0.0

877874
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units: 716537
value: 2.106806

877862
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877850
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value: 999999.0

877838
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877790
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species: 251222

877802
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species: 251342

298098
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fast: false
reactant: 888037
notes: GENE_ASSOCIATION: b2406 PROTEIN_ASSOCIATION: XapB SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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product: 888061
kinetic law: 888073
name: R_inosine_transport_in_via_proton_symport__reversible__periplasm_
product: 888049
reactant: 888025

888037
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species: 252762

252762
type: Species
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Inosine_C10H12N4O5

888061
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species: 252722

252722
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Inosine_C10H12N4O5

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value: 0.0

888122
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units: 716537
value: 0.0

888110
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value: 0.0

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units: 716537
value: 999999.0

888085
type: LocalParameter
units: 716537
value: -999999.0

888049
type: SpeciesReference
stoichiometry: 1.0
species: 251342

888025
type: SpeciesReference
stoichiometry: 1.0
species: 251382

303538
type: Reaction
product: 928678
fast: false
kinetic law: 928702
notes: GENE_ASSOCIATION: ( b2291 or b2744 ) PROTEIN_ASSOCIATION: ( YfbR ) or ( SurE ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.3.5
reactant: 928654
reversible: false
name: R_5__nucleotidase__dIMP_
product: 928690
reactant: 928666

928678
type: SpeciesReference
stoichiometry: 1.0
species: 245563

245563
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Deoxyinosine_C10H12N4O4

928762
type: LocalParameter
value: 0.0

928750
type: LocalParameter
units: 716537
value: 0.0

928738
type: LocalParameter
value: 0.0

928726
type: LocalParameter
units: 716537
value: 999999.0

928714
type: LocalParameter
units: 716537
value: 0.0

928654
type: SpeciesReference
stoichiometry: 1.0
species: 245503

245503
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dIMP_C10H11N4O7P

928690
type: SpeciesReference
stoichiometry: 1.0
species: 258902

928666
type: SpeciesReference
stoichiometry: 1.0
species: 251222

273780
type: Reaction
kinetic law: 737637
product: 737625
reactant: 737613
notes: GENE_ASSOCIATION: ( b4311 or b0929 or b2215 ) PROTEIN_ASSOCIATION: ( NanC ) or ( OmpF ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
fast: false
reversible: true
name: R_N_acetylneuraminate_transport_via_diffusion__extracellular_to_periplasm_

737698
type: LocalParameter
value: 0.0

737686
type: LocalParameter
units: 716537
value: 0.0

737674
type: LocalParameter
value: 0.0

737662
type: LocalParameter
units: 716537
value: 999999.0

737649
type: LocalParameter
units: 716537
value: -999999.0

737625
type: SpeciesReference
stoichiometry: 1.0
species: 239363

239363
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_N_Acetylneuraminate_C11H18NO9

737613
type: SpeciesReference
stoichiometry: 1.0
species: 239343

239343
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_N_Acetylneuraminate_C11H18NO9

276600
type: Reaction
kinetic law: 754861
reactant: 754801
product: 754837
reversible: false
fast: false
name: R_Ap5A_hydrolase
reactant: 754813
product: 754825
notes: GENE_ASSOCIATION: b0049 PROTEIN_ASSOCIATION: ApaH SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS:
product: 754849

754922
type: LocalParameter
value: 0.0

754910
type: LocalParameter
units: 716537
value: 0.0

754897
type: LocalParameter
value: 0.0

754885
type: LocalParameter
units: 716537
value: 999999.0

754873
type: LocalParameter
units: 716537
value: 0.0

754801
type: SpeciesReference
stoichiometry: 1.0
species: 241003

241003
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

754837
type: SpeciesReference
stoichiometry: 1.0
species: 241883

754813
type: SpeciesReference
stoichiometry: 1.0
species: 251222

754825
type: SpeciesReference
stoichiometry: 1.0
species: 239803

754849
type: SpeciesReference
stoichiometry: 2.0
species: 251342

305557
type: Reaction
reversible: false
reactant: 943133
product: 943171
name: R_3__5__cyclic_nucleotide_phosphodiesterase
kinetic law: 943183
reactant: 943146
product: 943158
fast: false
notes: GENE_ASSOCIATION: b1489 PROTEIN_ASSOCIATION: Dos SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.4.17

943133
type: SpeciesReference
stoichiometry: 1.0
species: 242283

242283
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_cAMP_C10H11N5O6P

943171
type: SpeciesReference
stoichiometry: 1.0
species: 251342

943243
type: LocalParameter
value: -0.004012

943231
type: LocalParameter
units: 716537
value: 0.0

943219
type: LocalParameter
value: 0.0

943207
type: LocalParameter
units: 716537
value: 999999.0

943195
type: LocalParameter
units: 716537
value: 0.0

943146
type: SpeciesReference
stoichiometry: 1.0
species: 251222

943158
type: SpeciesReference
stoichiometry: 1.0
species: 240703

256742
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

313097
type: Reaction
kinetic law: 992517
product: 992505
reactant: 992493
notes: GENE_ASSOCIATION: b2344 PROTEIN_ASSOCIATION: FadL SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
fast: false
reversible: false
name: R_Tetradecenoate_transport_via_facilitated_irreversible_diffusion__extracellular_to_periplasm_

992578
type: LocalParameter
value: 0.0

992566
type: LocalParameter
units: 716537
value: 0.0

992554
type: LocalParameter
value: 0.0

992542
type: LocalParameter
units: 716537
value: 999999.0

992529
type: LocalParameter
units: 716537
value: 0.0

992505
type: SpeciesReference
stoichiometry: 1.0
species: 262841

262841
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_tetradecenoate__n_C141__C14H25O2

992493
type: SpeciesReference
stoichiometry: 1.0
species: 262821

262821
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_tetradecenoate__n_C141__C14H25O2

256462
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014

298158
type: Reaction
reactant: 888339
product: 888401
product: 888377
reactant: 888351
notes: GENE_ASSOCIATION: b0029 PROTEIN_ASSOCIATION: LytB SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
kinetic law: 888413
reversible: false
fast: false
name: R_1_hydroxy_2_methyl_2__E__butenyl_4_diphosphate_reductase__ipdp_
reactant: 888364
product: 888389

888339
type: SpeciesReference
stoichiometry: 1.0
species: 251342

888401
type: SpeciesReference
stoichiometry: 1.0
species: 255942

888377
type: SpeciesReference
stoichiometry: 1.0
species: 251222

888351
type: SpeciesReference
stoichiometry: 1.0
species: 251142

251142
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_hydroxy_2_methyl_2__E__butenyl_4_diphosphate_C5H9O8P2

888477
type: LocalParameter
value: 0.0

888464
type: LocalParameter
units: 716537
value: 0.00176

888451
type: LocalParameter
value: 0.0

888438
type: LocalParameter
units: 716537
value: 999999.0

888425
type: LocalParameter
units: 716537
value: 0.0

888364
type: SpeciesReference
stoichiometry: 1.0
species: 255962

888389
type: SpeciesReference
stoichiometry: 1.0
species: 252782

252782
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Isopentenyl_diphosphate_C5H9O7P2

251982
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_hydroxymethylglutathione_C11H18N3O7S

244483
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dADP_C10H12N5O9P2

248922
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Galactitol_C6H14O6

302538
type: Reaction
product: 918349
reactant: 918325
product: 918361
product: 918337
reactant: 918301
product: 918374
reactant: 918313
notes: GENE_ASSOCIATION: ( ( b2422 and b2425 and b2424 and b2423 ) or ( b0763 and b0764 and b0765 ) or ( b2422 and b2424 and b2423 and b3917 ) ) PROTEIN_ASSOCIATION: ( CysA and CysP and CysU and CysW ) or ( ModA and ModB and ModC ) or ( CysA and CysU and CysW and Sbp ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
reversible: false
name: R_molybdate_transport_via_ABC_system__periplasm_
kinetic law: 918386
fast: false

918349
type: SpeciesReference
stoichiometry: 1.0
species: 251342

918325
type: SpeciesReference
stoichiometry: 1.0
species: 255282

255282
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Molybdate_MoO4

918361
type: SpeciesReference
stoichiometry: 1.0
species: 255242

255242
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Molybdate_MoO4

918337
type: SpeciesReference
stoichiometry: 1.0
species: 239803

918301
type: SpeciesReference
stoichiometry: 1.0
species: 241883

918374
type: SpeciesReference
stoichiometry: 1.0
species: 258902

918313
type: SpeciesReference
stoichiometry: 1.0
species: 251222

918446
type: LocalParameter
value: 0.0

918434
type: LocalParameter
units: 716537
value: 0.002327

918422
type: LocalParameter
value: 0.0

918410
type: LocalParameter
units: 716537
value: 999999.0

918398
type: LocalParameter
units: 716537
value: 0.0

252162
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Hexanoate__n_C60__C6H11O2

309117
type: Reaction
reversible: false
product: 966397
product: 966385
kinetic law: 966410
reactant: 966361
name: R_phosphoserine_phosphatase__L_serine_
fast: false
notes: GENE_ASSOCIATION: b4388 PROTEIN_ASSOCIATION: SerB SUBSYSTEM: S_Glycine_and_Serine_Metabolism PROTEIN_CLASS: 3.1.3.3
reactant: 966373

966397
type: SpeciesReference
stoichiometry: 1.0
species: 260321

966385
type: SpeciesReference
stoichiometry: 1.0
species: 258902

966470
type: LocalParameter
value: 0.0

966458
type: LocalParameter
units: 716537
value: 1.263167

966446
type: LocalParameter
value: 0.0

966434
type: LocalParameter
units: 716537
value: 999999.0

966422
type: LocalParameter
units: 716537
value: 0.0

966361
type: SpeciesReference
stoichiometry: 1.0
species: 251222

966373
type: SpeciesReference
stoichiometry: 1.0
species: 259561

259561
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_O_Phospho_L_serine_C3H6NO6P

293758
type: Reaction
kinetic law: 860734
product: 860721
reactant: 860709
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_D_glucarate_transport_via_diffusion__extracellular_to_periplasm_

860794
type: LocalParameter
value: 0.0

860782
type: LocalParameter
units: 716537
value: 0.0

860770
type: LocalParameter
value: 0.0

860758
type: LocalParameter
units: 716537
value: 999999.0

860746
type: LocalParameter
units: 716537
value: -999999.0

860721
type: SpeciesReference
stoichiometry: 1.0
species: 249682

249682
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_D_Glucarate_C6H8O8

860709
type: SpeciesReference
stoichiometry: 1.0
species: 249662

249662
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Glucarate_C6H8O8

291699
type: Reaction
product: 847178
reactant: 847142
reversible: false
kinetic law: 847190
name: R_FMN_reductase
reactant: 847154
product: 847166
notes: GENE_ASSOCIATION: ( b0937 or ( b2763 and b2764 ) or b3844 ) PROTEIN_ASSOCIATION: ( SsuE ) or ( CysIJ ) or ( Fre ) SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
reactant: 847130
fast: false

847178
type: SpeciesReference
stoichiometry: 1.0
species: 255982

847142
type: SpeciesReference
stoichiometry: 1.0
species: 251342

847251
type: LocalParameter
value: -0.001003

847239
type: LocalParameter
units: 716537
value: 0.0

847227
type: LocalParameter
value: 0.0

847214
type: LocalParameter
units: 716537
value: 999999.0

847202
type: LocalParameter
units: 716537
value: 0.0

847154
type: SpeciesReference
stoichiometry: 1.0
species: 256002

847166
type: SpeciesReference
stoichiometry: 1.0
species: 247943

247943
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Reduced_FMN_C17H21N4O9P

847130
type: SpeciesReference
stoichiometry: 1.0
species: 247923

247923
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_FMN_C17H19N4O9P

241443
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Arginine_C6H15N4O2

265181
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_4_Hydroxy_benzyl_alcohol_C7H8O2

248423
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_sn_Glycero_3_phosphoethanolamine_C5H14NO6P

270001
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Threonine_C4H9NO3

288899
type: Reaction
kinetic law: 827587
product: 827575
reactant: 827563
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_D_Ribose_exchange

827647
type: LocalParameter
value: -0.076234

827635
type: LocalParameter
units: 716537
value: 0.0

827623
type: LocalParameter
value: 0.0

827611
type: LocalParameter
units: 716537
value: 999999.0

827599
type: LocalParameter
units: 716537
value: 0.0

827575
type: SpeciesReference
stoichiometry: 1.0
species: 269840

269840
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Ribose_C5H10O5

827563
type: SpeciesReference
stoichiometry: 1.0
species: 259981

259981
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Ribose_C5H10O5

313536
type: Reaction
name: R_UDP_glucuronate_C_4___decarboxylase
notes: GENE_ASSOCIATION: b2255 PROTEIN_ASSOCIATION: ArnA SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
kinetic law: 996854
product: 996841
reversible: false
reactant: 996805
fast: false
product: 996829
reactant: 996792
product: 996817

996914
type: LocalParameter
value: 0.0

996902
type: LocalParameter
units: 716537
value: 0.0

996890
type: LocalParameter
value: 0.0

996878
type: LocalParameter
units: 716537
value: 999999.0

996866
type: LocalParameter
units: 716537
value: 0.0

996841
type: SpeciesReference
stoichiometry: 1.0
species: 263521

263521
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_UDP_4_keto_pyranose_C14H18N2O16P2

996805
type: SpeciesReference
stoichiometry: 1.0
species: 263741

263741
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_UDP_D_glucuronate_C15H19N2O18P2

996829
type: SpeciesReference
stoichiometry: 1.0
species: 255962

996792
type: SpeciesReference
stoichiometry: 1.0
species: 255942

996817
type: SpeciesReference
stoichiometry: 1.0
species: 243283

253922
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Malonyl_CoA_C24H33N7O19P3S

285919
type: Reaction
kinetic law: 813159
product: 813147
reactant: 813135
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Ethanolamine_exchange

813220
type: LocalParameter
value: -0.036111

813208
type: LocalParameter
units: 716537
value: 0.0

813196
type: LocalParameter
value: 0.0

813184
type: LocalParameter
units: 716537
value: 999999.0

813171
type: LocalParameter
units: 716537
value: 0.0

813147
type: SpeciesReference
stoichiometry: 1.0
species: 266901

266901
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Ethanolamine_C2H8NO

813135
type: SpeciesReference
stoichiometry: 1.0
species: 246803

246803
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Ethanolamine_C2H8NO

275740
type: Reaction
reversible: true
product: 749435
fast: false
product: 749459
name: R_alcohol_dehydrogenase__ethanol_
reactant: 749411
notes: GENE_ASSOCIATION: ( b0356 or b1478 or b1241 ) PROTEIN_ASSOCIATION: ( FrmA ) or ( AdhP ) or ( AdhE ) SUBSYSTEM: S_Pyruvate_Metabolism PROTEIN_CLASS: 1.1.1.1
kinetic law: 749471
product: 749447
reactant: 749423

749435
type: SpeciesReference
stoichiometry: 1.0
species: 238743

238743
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Acetaldehyde_C2H4O

749459
type: SpeciesReference
stoichiometry: 1.0
species: 255962

749411
type: SpeciesReference
stoichiometry: 1.0
species: 246903

246903
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Ethanol_C2H6O

749531
type: LocalParameter
value: 0.0

749519
type: LocalParameter
units: 716537
value: 0.0

749507
type: LocalParameter
value: 0.0

749495
type: LocalParameter
units: 716537
value: 999999.0

749483
type: LocalParameter
units: 716537
value: -999999.0

749447
type: SpeciesReference
stoichiometry: 1.0
species: 251342

749423
type: SpeciesReference
stoichiometry: 1.0
species: 255942

265601
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Adenosylcobalamin_C72H100CoN18O17P

266181
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Chloride_Cl

288019
type: Reaction
kinetic law: 823326
product: 823314
reactant: 823302
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Methionine_exchange

823387
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value: -0.14996

823375
type: LocalParameter
units: 716537
value: 0.0

823362
type: LocalParameter
value: 0.0

823350
type: LocalParameter
units: 716537
value: 999999.0

823338
type: LocalParameter
units: 716537
value: 0.0

823314
type: SpeciesReference
stoichiometry: 1.0
species: 269021

269021
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Methionine_C5H11NO2S

823302
type: SpeciesReference
stoichiometry: 1.0
species: 254662

254662
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Methionine_C5H11NO2S

262141
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Reduced_thioredoxin_XH2

311357
type: Reaction
reversible: false
notes: GENE_ASSOCIATION: b0121 PROTEIN_ASSOCIATION: SpeE SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 2.5.1.16
product: 980325
product: 980351
fast: false
product: 980338
reactant: 980299
kinetic law: 980364
reactant: 980312
name: R_spermidine_synthase

980325
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stoichiometry: 1.0
species: 238143

238143
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_5_Methylthioadenosine_C11H15N5O3S

980351
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stoichiometry: 1.0
species: 260701

260701
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Spermidine_C7H22N3

980338
type: SpeciesReference
stoichiometry: 1.0
species: 251342

980299
type: SpeciesReference
stoichiometry: 1.0
species: 240663

240663
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_S_Adenosylmethioninamine_C14H24N6O3S

980424
type: LocalParameter
value: 0.0

980412
type: LocalParameter
units: 716537
value: 0.0

980400
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value: 0.0

980388
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units: 716537
value: 999999.0

980376
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units: 716537
value: 0.0

980312
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stoichiometry: 1.0
species: 259601

259601
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Putrescine_C4H14N2

313697
type: Reaction
reactant: 998939
name: R_2_keto_4_methylthiobutyrate_transamination
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS:
kinetic law: 998988
fast: false
reversible: false
reactant: 998951
product: 998976
product: 998963

998939
type: SpeciesReference
stoichiometry: 1.0
species: 235794

235794
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_keto_4_methylthiobutyrate_C5H7O3S

999049
type: LocalParameter
value: 0.0

999037
type: LocalParameter
units: 716537
value: 0.0

999025
type: LocalParameter
value: 0.0

999012
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units: 716537
value: 999999.0

999000
type: LocalParameter
units: 716537
value: 0.0

998951
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stoichiometry: 1.0
species: 249962

249962
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Glutamate_C5H8NO4

998976
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stoichiometry: 1.0
species: 254642

254642
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Methionine_C5H11NO2S

998963
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stoichiometry: 1.0
species: 240103

240103
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Oxoglutarate_C5H4O5

291778
type: Reaction
product: 847870
fast: false
kinetic law: 847882
reactant: 847822
name: R_fructose_1_phosphate_kinase
reactant: 847834
notes: GENE_ASSOCIATION: b2168 PROTEIN_ASSOCIATION: FruK SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 2.7.1.56
product: 847858
reversible: false
product: 847846

847870
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stoichiometry: 1.0
species: 251342

847942
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value: 0.0

847930
type: LocalParameter
units: 716537
value: 0.0

847918
type: LocalParameter
value: 0.0

847906
type: LocalParameter
units: 716537
value: 999999.0

847894
type: LocalParameter
units: 716537
value: 0.0

847822
type: SpeciesReference
stoichiometry: 1.0
species: 241883

847834
type: SpeciesReference
stoichiometry: 1.0
species: 246963

246963
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Fructose_1_phosphate_C6H11O9P

847858
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stoichiometry: 1.0
species: 247183

247183
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Fructose_1_6_bisphosphate_C6H10O12P2

847846
type: SpeciesReference
stoichiometry: 1.0
species: 239803

259521
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_psicoselysine_C12H25N2O7

302958
type: Reaction
notes: GENE_ASSOCIATION: ( b2518 or b0474 ) PROTEIN_ASSOCIATION: ( Ndk ) or ( Adk ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 2.7.4.6
kinetic law: 923658
fast: false
product: 923634
product: 923646
reversible: true
reactant: 923610
name: R_nucleoside_diphosphate_kinase__ATPdTDP_
reactant: 923622

923719
type: LocalParameter
value: 0.0

923707
type: LocalParameter
units: 716537
value: 0.019279

923695
type: LocalParameter
value: 0.0

923683
type: LocalParameter
units: 716537
value: 999999.0

923670
type: LocalParameter
units: 716537
value: -999999.0

923634
type: SpeciesReference
stoichiometry: 1.0
species: 239803

923646
type: SpeciesReference
stoichiometry: 1.0
species: 246323

246323
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dTTP_C10H13N2O14P3

923610
type: SpeciesReference
stoichiometry: 1.0
species: 241883

923622
type: SpeciesReference
stoichiometry: 1.0
species: 246203

246203
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dTDP_C10H13N2O11P2

281160
type: Reaction
product: 786682
kinetic law: 786694
fast: false
reactant: 786646
reversible: true
notes: GENE_ASSOCIATION: b3648 PROTEIN_ASSOCIATION: Gmkec SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 2.7.4.8
product: 786670
name: R_deoxyguanylate_kinase__dGMPATP_
reactant: 786658

786682
type: SpeciesReference
stoichiometry: 1.0
species: 245043

245043
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dGDP_C10H12N5O10P2

786754
type: LocalParameter
value: 0.0

786742
type: LocalParameter
units: 716537
value: 0.0

786730
type: LocalParameter
value: 0.0

786718
type: LocalParameter
units: 716537
value: 999999.0

786706
type: LocalParameter
units: 716537
value: -999999.0

786646
type: SpeciesReference
stoichiometry: 1.0
species: 241883

786670
type: SpeciesReference
stoichiometry: 1.0
species: 239803

786658
type: SpeciesReference
stoichiometry: 1.0
species: 245063

245063
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dGMP_C10H12N5O7P

279320
type: Reaction
product: 772051
reversible: false
name: R_Cobalt__Co2__ABC_transporter__periplasm_
reactant: 772003
kinetic law: 772075
product: 772027
notes: GENE_ASSOCIATION: b3469 PROTEIN_ASSOCIATION: ZntA SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
reactant: 771991
reactant: 772015
product: 772039
product: 772063
fast: false

772051
type: SpeciesReference
stoichiometry: 1.0
species: 258902

772003
type: SpeciesReference
stoichiometry: 1.0
species: 243363

243363
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Co2_Co

772135
type: LocalParameter
value: -0.004012

772123
type: LocalParameter
units: 716537
value: 0.0

772111
type: LocalParameter
value: 0.0

772099
type: LocalParameter
units: 716537
value: 999999.0

772087
type: LocalParameter
units: 716537
value: 0.0

772027
type: SpeciesReference
stoichiometry: 1.0
species: 239803

771991
type: SpeciesReference
stoichiometry: 1.0
species: 241883

772015
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stoichiometry: 1.0
species: 251222

772039
type: SpeciesReference
stoichiometry: 1.0
species: 251342

772063
type: SpeciesReference
stoichiometry: 1.0
species: 243403

243403
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Co2_Co

280859
type: Reaction
kinetic law: 783624
reversible: false
reactant: 783564
product: 783588
product: 783576
reactant: 783540
name: R_M_diaminopimelic_acid_ABC_transport__periplasm_
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
product: 783600
product: 783612
reactant: 783552
fast: false

783684
type: LocalParameter
value: 0.0

783672
type: LocalParameter
units: 716537
value: 0.0

783660
type: LocalParameter
value: 0.0

783648
type: LocalParameter
units: 716537
value: 999999.0

783636
type: LocalParameter
units: 716537
value: 0.0

783564
type: SpeciesReference
stoichiometry: 1.0
species: 234714

234714
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_meso_2_6_Diaminoheptanedioate_C7H14N2O4

783588
type: SpeciesReference
stoichiometry: 1.0
species: 239803

783576
type: SpeciesReference
stoichiometry: 1.0
species: 234674

234674
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_meso_2_6_Diaminoheptanedioate_C7H14N2O4

783540
type: SpeciesReference
stoichiometry: 1.0
species: 241883

783600
type: SpeciesReference
stoichiometry: 1.0
species: 251342

783612
type: SpeciesReference
stoichiometry: 1.0
species: 258902

783552
type: SpeciesReference
stoichiometry: 1.0
species: 251222

261341
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Thiocyanate_CNS

254382
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Mannose_C6H12O6

307077
type: Reaction
kinetic law: 953532
reactant: 953496
product: 953508
reversible: false
name: R_Phospholipase_A1__phosphatidate__n_C161___periplasm_
reactant: 953484
notes: GENE_ASSOCIATION: b3821 PROTEIN_ASSOCIATION: PldA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.32
fast: false
product: 953520

953592
type: LocalParameter
value: 0.0

953580
type: LocalParameter
units: 716537
value: 0.0

953568
type: LocalParameter
value: 0.0

953556
type: LocalParameter
units: 716537
value: 999999.0

953544
type: LocalParameter
units: 716537
value: 0.0

953496
type: SpeciesReference
stoichiometry: 1.0
species: 257442

257442
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_1_2_dihexadec_9_enoyl_sn_glycerol_3_phosphate_C35H63O8P1

953508
type: SpeciesReference
stoichiometry: 1.0
species: 235714

235714
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_2_hexadec_9_enoyl_sn_glycerol_3_phosphate_C19H36O7P1

953484
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stoichiometry: 1.0
species: 251262

953520
type: SpeciesReference
stoichiometry: 1.0
species: 251562

251562
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Hexadecenoate__n_C161__C16H29O2

250082
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Glycine_C2H5NO2

313637
type: Reaction
kinetic law: 998214
product: 998202
reactant: 998189
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
fast: false
reversible: false
name: R_transport__cytoplasm_to_periplasm_

998274
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value: 0.0

998262
type: LocalParameter
units: 716537
value: 0.0

998250
type: LocalParameter
value: 0.0

998238
type: LocalParameter
units: 716537
value: 999999.0

998226
type: LocalParameter
units: 716537
value: 0.0

998202
type: SpeciesReference
stoichiometry: 1.0
species: 263181

263181
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034

998189
type: SpeciesReference
stoichiometry: 1.0
species: 263161

263161
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

300038
type: Reaction
notes: GENE_ASSOCIATION: b3825 PROTEIN_ASSOCIATION: PldB SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS:
product: 900387
kinetic law: 900399
fast: false
reactant: 900351
product: 900375
name: R_Lysophospholipase_L2__acyltransferase__2_acyl_glycerophosphoglycerol__n_C161_
reactant: 900363
reversible: false

900387
type: SpeciesReference
stoichiometry: 1.0
species: 248443

248443
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Glycerophosphoglycerol_C6H14O8P

900460
type: LocalParameter
value: -1.221248

900447
type: LocalParameter
units: 716537
value: 0.0

900435
type: LocalParameter
value: 0.0

900423
type: LocalParameter
units: 716537
value: 999999.0

900411
type: LocalParameter
units: 716537
value: 0.0

900351
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stoichiometry: 1.0
species: 235174

235174
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Acyl_sn_glycero_3_phosphoglycerol__n_C161__C22H42O9P1

900375
type: SpeciesReference
stoichiometry: 1.0
species: 241103

241103
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_acyl_phosphatidylglycerol__n_C161__C54H98O11P

900363
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stoichiometry: 1.0
species: 258242

258242
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Phosphatidylglycerol__dihexadec_9_enoyl__n_C161__C38H70O10P1

268521
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_myo_Inositol_C6H12O6

248403
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_sn_Glycero_3_phosphoethanolamine_C5H14NO6P

306877
type: Reaction
reactant: 952314
kinetic law: 952350
product: 952338
product: 952326
notes: GENE_ASSOCIATION: ( b0576 or b0112 ) PROTEIN_ASSOCIATION: ( PheP ) or ( AroP ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
fast: false
reversible: true
reactant: 952302
name: R_L_phenylalanine_reversible_transport_via_proton_symport__periplasm_

952314
type: SpeciesReference
stoichiometry: 1.0
species: 258702

952410
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value: 0.0

952398
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units: 716537
value: 0.0

952386
type: LocalParameter
value: 0.0

952374
type: LocalParameter
units: 716537
value: 999999.0

952362
type: LocalParameter
units: 716537
value: -999999.0

952338
type: SpeciesReference
stoichiometry: 1.0
species: 258662

258662
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Phenylalanine_C9H11NO2

952326
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stoichiometry: 1.0
species: 251342

952302
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stoichiometry: 1.0
species: 251382

253142
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Lactate_C3H5O3

293698
type: Reaction
kinetic law: 860408
product: 860396
product: 860384
reactant: 860372
notes: GENE_ASSOCIATION: b3126 PROTEIN_ASSOCIATION: GarL SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 4.1.2.20
fast: false
reversible: false
name: R_5_dehydro_4_deoxyglucarate_aldolase

860468
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value: 0.0

860456
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units: 716537
value: 0.0

860444
type: LocalParameter
value: 0.0

860432
type: LocalParameter
units: 716537
value: 999999.0

860420
type: LocalParameter
units: 716537
value: 0.0

860396
type: SpeciesReference
stoichiometry: 1.0
species: 259721

259721
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Pyruvate_C3H3O3

860384
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stoichiometry: 1.0
species: 235674

235674
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Hydroxy_3_oxopropanoate_C3H3O4

860372
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stoichiometry: 1.0
species: 238063

238063
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_5_Dehydro_4_deoxy_D_glucarate_C6H6O7

279740
type: Reaction
product: 774698
reactant: 774662
notes: GENE_ASSOCIATION: b0037 PROTEIN_ASSOCIATION: CaiC SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS:
reactant: 774674
product: 774722
product: 774710
kinetic law: 774734
reversible: false
name: R_D_Carnitine_CoA_Ligase
reactant: 774686
fast: false

774698
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stoichiometry: 1.0
species: 239803

774662
type: SpeciesReference
stoichiometry: 1.0
species: 241883

774674
type: SpeciesReference
stoichiometry: 1.0
species: 243343

774722
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stoichiometry: 1.0
species: 258902

774710
type: SpeciesReference
stoichiometry: 1.0
species: 243703

243703
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_carnitinyl_CoA_C28H46N8O18P3S

774795
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value: -0.44637

774782
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units: 716537
value: 0.0

774770
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value: 0.0

774758
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units: 716537
value: 999999.0

774746
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units: 716537
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774686
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species: 243723

243723
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_D_Carnitine_C7H15NO3

280860
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kinetic law: 783720
product: 783708
reactant: 783696
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_1_5_Diaminopentane_transport_via_diffusion__extracellular_to_periplasm_

783782
type: LocalParameter
value: 0.0

783770
type: LocalParameter
units: 716537
value: 0.0

783758
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value: 0.0

783746
type: LocalParameter
units: 716537
value: 999999.0

783733
type: LocalParameter
units: 716537
value: -999999.0

783708
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stoichiometry: 1.0
species: 233614

233614
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_1_5_Diaminopentane_C5H16N2

783696
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stoichiometry: 1.0
species: 233594

233594
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_1_5_Diaminopentane_C5H16N2

313997
type: Reaction
kinetic law: 002589
product: 002577
reactant: 002565
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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310777
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product: 976801
reactant: 976765
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reactant: 976789
notes: GENE_ASSOCIATION: b0586 PROTEIN_ASSOCIATION: EntF SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
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reactant: 976777
product: 976813

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260381
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293798
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product: 860963
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kinetic law: 860987
notes: GENE_ASSOCIATION: b3631 PROTEIN_ASSOCIATION: WaaG SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
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860951
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860963
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263601
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initial amount: NaN
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284039
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kinetic law: 804052
product: 804040
reactant: 804028
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_2_3_diaminopropionate_exchange

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804101
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804089
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species: 264961

264961
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name: M_2_3_diaminopropionate_C3H9N2O2

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234394
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282819
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kinetic law: 796854
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reactant: 796805
product: 796841
reactant: 796793
product: 796829
reactant: 796817
name: R_enoyl_acyl_carrier_protein_reductase__NADPH___n_C120_
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796902
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796866
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796805
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244943
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796817
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261441
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239683
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initial amount: NaN
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name: M_Adenosine_C10H13N5O4

309637
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reactant: 969664
product: 969676
reactant: 969652
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notes: GENE_ASSOCIATION: b2418 PROTEIN_ASSOCIATION: PdxK SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.7.1.35
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kinetic law: 969712
product: 969700
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259641
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initial amount: NaN
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name: M_Pyridoxamine_5__phosphate_C8H12N2O5P

307497
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kinetic law: 956295
name: R_Phospholipase_A2__phosphatidate__n_C161___periplasm_
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notes: GENE_ASSOCIATION: b3821 PROTEIN_ASSOCIATION: PldA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.4
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product: 956259
product: 956283
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956333
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956259
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species: 233974

233974
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956283
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species: 251562

294118
type: Reaction
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kinetic law: 863082
product: 863045
product: 863058
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863070
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species: 261201

261201
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initial amount: NaN
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name: M_D_Tagatose_6_phosphate_C6H11O9P

863021
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species: 248902

248902
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initial amount: NaN
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name: M_Galactitol_1_phosphate_C6H13O9P

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species: 255942

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863118
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863058
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281439
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product: 788300
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fast: false
product: 788288
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notes: GENE_ASSOCIATION: b0031 PROTEIN_ASSOCIATION: DapB SUBSYSTEM: S_Threonine_and_Lysine_Metabolism PROTEIN_CLASS: 1.3.1.26
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234514
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name: M_2_3_Dihydrodipicolinate_C7H5NO4

788300
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species: 261521

261521
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initial amount: NaN
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species: 255982

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value: 0.273301

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237224
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287259
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product: 819632
reactant: 819620
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
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819692
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value: 0.0

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819620
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251402
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240843
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262761
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275760
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notes: GENE_ASSOCIATION: b1385 PROTEIN_ASSOCIATION: FeaB SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 1.2.1.39
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reversible: false
product: 749580
product: 749604
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reactant: 749567
product: 749592

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257542
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749567
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749592
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species: 255962

295658
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product: 873121
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reactant: 873085
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species: 250822

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306497
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kinetic law: 949801
reactant: 949765
product: 949789
notes: GENE_ASSOCIATION: ( b0418 or b1278 ) PROTEIN_ASSOCIATION: ( PgpA ) or ( PgpB ) SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.3.27
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reactant: 949753

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258182
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name: M_Phosphatidylglycerol__ditetradec_7_enoyl__n_C141__C34H62O10P1

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initial amount: NaN
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species: 251262

304298
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kinetic law: 934783
product: 934771
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notes: GENE_ASSOCIATION: b2037 PROTEIN_ASSOCIATION: WzxB SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
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934843
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934819
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256522
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282059
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product: 792317
reactant: 792305
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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792342
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245763
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245743
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276700
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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755465
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247203
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241323
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241363
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units: 716537
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313116
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kinetic law: 992674
product: 992638
product: 992650
product: 992662
fast: false
notes: GENE_ASSOCIATION: ( b0763 and b0764 and b0765 ) PROTEIN_ASSOCIATION: ( ModA and ModB and ModC ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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reversible: false
product: 992626
reactant: 992602
name: R_tungstate_transport_via_ABC_system__periplasm_
reactant: 992614

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units: 716537
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units: 716537
value: 0.0

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species: 251342

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992662
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species: 262861

262861
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_tungstate_O4W1

992590
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species: 241883

992626
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992602
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262901
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_tungstate_O4W1

272940
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reversible: false
name: R_acyl_acyl_carrier_protein_synthetase___n_C80_
reactant: 732605
product: 732653
reactant: 732617
product: 732641
kinetic law: 732678
notes: GENE_ASSOCIATION: ( b2836 and b1094 ) PROTEIN_ASSOCIATION: ( Aas and AcpP ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 6.2.1.20
fast: false
product: 732666
reactant: 732629

732605
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species: 238303

238303
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_acyl_carrier_protein_C11H21N2O7PRS

732653
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species: 256722

256722
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Octanoyl_ACP__n_C80ACP__C19H35N2O8PRS

732617
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species: 241883

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species: 240703

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value: 0.0

732714
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species: 256902

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_octanoate__n_C80__C8H15O2

279360
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kinetic law: 772291
product: 772279
reactant: 772267
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_cobalt__Co2__transport_via_diffusion__extracellular_to_periplasm_

772352
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772339
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units: 716537
value: 0.002327

772327
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772315
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units: 716537
value: 999999.0

772303
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units: 716537
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772279
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species: 243403

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species: 243383

249782
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_D_Glucuronate_C6H9O7

314096
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reactant: 003531
fast: false
kinetic law: 003580
product: 003544
reversible: false
name: R_xylulokinase
product: 003556
notes: GENE_ASSOCIATION: ( b3564 or b0063 ) PROTEIN_ASSOCIATION: ( XylB ) or ( AraB ) SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 2.7.1.17
reactant: 003519
product: 003568

003531
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stoichiometry: 1.0
species: 264661

264661
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Xylulose_C5H10O5

003640
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value: 0.0

003628
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units: 716537
value: 0.0

003616
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value: 0.0

003604
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units: 716537
value: 999999.0

003592
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units: 716537
value: 0.0

003544
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stoichiometry: 1.0
species: 239803

003556
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stoichiometry: 1.0
species: 251342

003519
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stoichiometry: 1.0
species: 241883

003568
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stoichiometry: 1.0
species: 264561

264561
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Xylulose_5_phosphate_C5H9O8P

291419
type: Reaction
name: R_Fe_enterobactin_reduction__Fe_III__unloading_
product: 843854
product: 843879
reactant: 843830
fast: false
product: 843842
reversible: false
product: 843867
reactant: 843818
kinetic law: 843891
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:

843854
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stoichiometry: 1.0
species: 247043

247043
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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843879
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species: 251342

843830
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stoichiometry: 2.0
species: 247663

247663
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Fe_enterobactin_C30H27FeN3O15

843842
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stoichiometry: 2.0
species: 246723

246723
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Enterochelin_C30H27N3O15

843867
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stoichiometry: 2.0
species: 247203

843818
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stoichiometry: 1.0
species: 247063

247063
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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843952
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843940
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value: 0.0

843927
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843915
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value: 999999.0

843903
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units: 716537
value: 0.0

253262
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Lactaldehyde_C3H6O2

285839
type: Reaction
kinetic law: 812775
product: 812763
reactant: 812751
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Deoxyuridine_exchange

812835
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value: -0.142437

812823
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units: 716537
value: 0.0

812811
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value: 0.0

812799
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units: 716537
value: 999999.0

812787
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units: 716537
value: 0.0

812763
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stoichiometry: 1.0
species: 266821

266821
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Deoxyuridine_C9H12N2O5

812751
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stoichiometry: 1.0
species: 246443

246443
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Deoxyuridine_C9H12N2O5

237844
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_4_Methyl_5__2_hydroxyethyl__thiazole_C6H9NOS

281059
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product: 785506
reactant: 785482
product: 785494
kinetic law: 785518
reactant: 785470
reversible: false
fast: false
reactant: 785457
notes: GENE_ASSOCIATION: b2143 PROTEIN_ASSOCIATION: Cdd SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.5.4.14
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785506
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species: 256042

785482
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species: 251222

785494
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stoichiometry: 1.0
species: 246423

246423
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Deoxyuridine_C9H12N2O5

785578
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value: 0.0

785554
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units: 716537
value: 999999.0

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units: 716537
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species: 251342

785457
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species: 244863

244863
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Deoxycytidine_C9H13N3O4

298538
type: Reaction
kinetic law: 890809
name: R_3_ketoacyl_CoA_thiolase
notes: GENE_ASSOCIATION: ( b3845 or b2342 ) PROTEIN_ASSOCIATION: ( FadA ) or ( FadI ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.16
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product: 890785
product: 890797
reactant: 890773
reversible: false
reactant: 890761

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890857
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value: 0.0

890845
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890821
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units: 716537
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stoichiometry: 1.0
species: 238823

238823
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Acetyl_CoA_C23H34N7O17P3S

890797
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species: 261421

261421
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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890773
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species: 243343

890761
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species: 237404

237404
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_3_Oxohexadecanoyl_CoA_C37H60N7O18P3S

261761
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_L_Threonine_O_3_phosphate_C4H8NO6P

303357
type: Reaction
notes: GENE_ASSOCIATION: ( ( b1465 and b1466 and b1467 and b1468 ) or ( b1224 and b1225 and b1226 and b1227 ) ) PROTEIN_ASSOCIATION: ( NarZYWV ) or ( NarGHIJ ) SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS:
kinetic law: 927168
reversible: false
product: 927143
reactant: 927106
name: R_Nitrate_reductase__Menaquinol_8___periplasm_
product: 927130
fast: false
reactant: 927082
reactant: 927094
product: 927118
product: 927156

927228
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value: -0.001003

927216
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units: 716537
value: 0.0

927204
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927192
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units: 716537
value: 999999.0

927180
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units: 716537
value: 0.0

927143
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stoichiometry: 1.0
species: 256242

256242
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Nitrite_NO2

927106
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species: 256302

256302
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Nitrate_NO3

927130
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species: 255322

927082
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species: 251342

927094
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species: 255302

927118
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species: 251222

927156
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species: 251382

304757
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reactant: 937757
fast: false
notes: GENE_ASSOCIATION: ( b3843 or b2311 ) PROTEIN_ASSOCIATION: ( UbiD ) or ( UbiX ) SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
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reversible: false
kinetic law: 937794
product: 937770
product: 937782
reactant: 937745

937757
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stoichiometry: 1.0
species: 251342

937855
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value: 0.0

937843
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units: 716537
value: 1.64E-4

937831
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value: 0.0

937818
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units: 716537
value: 999999.0

937806
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units: 716537
value: 0.0

937770
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stoichiometry: 1.0
species: 236115

236115
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Octaprenylphenol_C46H70O

937782
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stoichiometry: 1.0
species: 243283

937745
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species: 237564

237564
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_3_Octaprenyl_4_hydroxybenzoate_C47H69O3

238443
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_L_alanine_D_glutamate_C8H13N2O5

250862
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Oxidized_glutathione_C20H30N6O12S2

272680
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reactant: 730876
notes: GENE_ASSOCIATION: b4266 PROTEIN_ASSOCIATION: IdnO SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 1.1.1.69
reactant: 730901
kinetic law: 730937
reversible: true
reactant: 730888
name: R_5_dehydro_D_gluconate_reductase
product: 730913
product: 730925
fast: false

730876
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stoichiometry: 1.0
species: 238023

238023
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_5_Dehydro_D_gluconate_C6H9O7

730901
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species: 256002

730998
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value: 0.0

730986
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units: 716537
value: 0.0

730974
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730961
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730949
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730888
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species: 251342

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species: 249582

249582
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Gluconate_C6H11O7

730925
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species: 255982

258542
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Phosphatidylglycerophosphate__dihexadec_9_enoyl__n_C161__C38H69O13P2

263241
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

301178
type: Reaction
notes: GENE_ASSOCIATION: ( b0731 and b2415 and b2416 ) PROTEIN_ASSOCIATION: ( MngA and PtsH and PtsI ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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kinetic law: 907485
reactant: 907449
fast: false
product: 907461
reactant: 907437
product: 907473
name: R_2_O_alpha_mannosyl_D_glycerate_transport_via_PEPPyr_PTS__periplasm_

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value: 0.0

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value: 0.0

907522
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907510
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value: 999999.0

907497
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species: 254482

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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_2_alpha_D_Mannosyl__D_glycerate_C9H15O9

907461
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species: 254362

254362
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_2_alpha_D_Mannosyl_6_phosphate__D_glycerate_C9H14O12P

907437
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species: 258062

907473
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species: 259721

240803
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tetrapeptide_C37H57N7O20

268921
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boundary condition: true
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initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Mannose_6_phosphate_C6H11O9P

237943
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_N___R__4_Phosphopantothenoyl__L_cysteine_C12H20N2O9PS

313916
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reactant: 001454
name: R_valine_transaminase
kinetic law: 001490
notes: GENE_ASSOCIATION: b3770 PROTEIN_ASSOCIATION: IlvE SUBSYSTEM: S_Valine__Leucine__and_Isoleucine_Metabolism PROTEIN_CLASS: 2.6.1.42
reversible: true
product: 001466
product: 001478
reactant: 001442
fast: false

001454
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stoichiometry: 1.0
species: 264261

264261
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_L_Valine_C5H11NO2

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001538
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units: 716537
value: -0.311772

001526
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001514
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001502
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stoichiometry: 1.0
species: 237174

237174
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_3_Methyl_2_oxobutanoate_C5H7O3

001478
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species: 249962

001442
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species: 240103

277020
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product: 757540
notes: GENE_ASSOCIATION: b1876 PROTEIN_ASSOCIATION: ArgS SUBSYSTEM: S_tRNA_Charging PROTEIN_CLASS: 6.1.1.19
name: R_Arginyl_tRNA_synthetase
reversible: false
reactant: 757480
product: 757528
reactant: 757492
fast: false
kinetic law: 757552
reactant: 757504
product: 757516

757540
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species: 259141

757480
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757528
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species: 241523

241523
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_L_Arginyl_tRNA_Arg__C6H14N4OR

757492
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species: 241883

757613
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value: 0.0

757576
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units: 716537
value: 999999.0

757564
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units: 716537
value: 0.0

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stoichiometry: 1.0
species: 262241

262241
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_tRNA_Arg__R

757516
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stoichiometry: 1.0
species: 240703

273260
type: Reaction
kinetic law: 734544
product: 734532
reactant: 734520
notes: GENE_ASSOCIATION: s0001 PROTEIN_ASSOCIATION: SPONTANEOUS SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
fast: false
reversible: true
name: R_acetaldehyde_reversible_transport__periplasm_

734604
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value: 0.0

734592
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units: 716537
value: 0.0

734580
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value: 0.0

734568
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units: 716537
value: 999999.0

734556
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units: 716537
value: -999999.0

734532
type: SpeciesReference
stoichiometry: 1.0
species: 238743

734520
type: SpeciesReference
stoichiometry: 1.0
species: 238783

238783
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Acetaldehyde_C2H4O

279420
type: Reaction
kinetic law: 772641
product: 772629
reactant: 772617
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
fast: false
reversible: false
name: R_core_oligosaccharide_lipid_A_transport_via_vector__periplasm_to_extracellular_

772702
type: LocalParameter
value: 0.0

772689
type: LocalParameter
units: 716537
value: 0.0

772677
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value: 0.0

772665
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units: 716537
value: 999999.0

772653
type: LocalParameter
units: 716537
value: 0.0

772629
type: SpeciesReference
stoichiometry: 1.0
species: 243443

243443
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014

772617
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stoichiometry: 1.0
species: 243463

243463
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034

239163
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Acetyl_maltose_C14H24O12

281479
type: Reaction
reversible: true
reactant: 788529
notes: GENE_ASSOCIATION: ( b1606 or b0048 ) PROTEIN_ASSOCIATION: ( FolM ) or ( FolA ) SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 1.5.1.3
product: 788553
name: R_dihydrofolate_reductase
reactant: 788541
reactant: 788517
fast: false
product: 788565
kinetic law: 788577

788529
type: SpeciesReference
stoichiometry: 1.0
species: 251342

788553
type: SpeciesReference
stoichiometry: 1.0
species: 255982

788541
type: SpeciesReference
stoichiometry: 1.0
species: 256002

788517
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stoichiometry: 1.0
species: 245303

245303
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_7_8_Dihydrofolate_C19H19N7O6

788565
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stoichiometry: 1.0
species: 261561

261561
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_5_6_7_8_Tetrahydrofolate_C19H21N7O6

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value: 0.0

788625
type: LocalParameter
units: 716537
value: 0.019772

788613
type: LocalParameter
value: 0.0

788601
type: LocalParameter
units: 716537
value: 999999.0

788589
type: LocalParameter
units: 716537
value: -999999.0

284059
type: Reaction
kinetic law: 804150
product: 804138
reactant: 804126
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_meso_2_6_Diaminoheptanedioate_exchange

804210
type: LocalParameter
value: -0.116357

804198
type: LocalParameter
units: 716537
value: 0.0

804186
type: LocalParameter
value: 0.0

804174
type: LocalParameter
units: 716537
value: 999999.0

804162
type: LocalParameter
units: 716537
value: 0.0

804138
type: SpeciesReference
stoichiometry: 1.0
species: 264981

264981
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_meso_2_6_Diaminoheptanedioate_C7H14N2O4

804126
type: SpeciesReference
stoichiometry: 1.0
species: 234694

234694
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_meso_2_6_Diaminoheptanedioate_C7H14N2O4

310337
type: Reaction
product: 973981
reactant: 973969
name: R_ribonucleoside_diphosphate_reductase__CDP_
kinetic law: 974017
reactant: 973957
reversible: false
fast: false
product: 974005
product: 973993
notes: GENE_ASSOCIATION: ( ( ( b2234 and b2235 ) and b2582 ) or ( ( b2234 and b2235 ) and b3781 ) ) PROTEIN_ASSOCIATION: ( NrdA and TrxC ) or ( NrdA and TrxA ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 1.17.4.1

973981
type: SpeciesReference
stoichiometry: 1.0
species: 244763

244763
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dCDP_C9H12N3O10P2

973969
type: SpeciesReference
stoichiometry: 1.0
species: 262141

974077
type: LocalParameter
value: 0.0

974065
type: LocalParameter
units: 716537
value: 0.0

974053
type: LocalParameter
value: 0.0

974041
type: LocalParameter
units: 716537
value: 999999.0

974029
type: LocalParameter
units: 716537
value: 0.0

973957
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stoichiometry: 1.0
species: 242563

242563
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_CDP_C9H12N3O11P2

974005
type: SpeciesReference
stoichiometry: 1.0
species: 262121

973993
type: SpeciesReference
stoichiometry: 1.0
species: 251222

302777
type: Reaction
reversible: false
kinetic law: 921206
fast: false
reactant: 921134
reactant: 921158
name: R_NADH_dehydrogenase__demethylmenaquinone_8__3_protons___periplasm_
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reactant: 921146
product: 921182
product: 921170
product: 921194

921266
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value: 0.0

921254
type: LocalParameter
units: 716537
value: 0.0

921242
type: LocalParameter
value: 0.0

921230
type: LocalParameter
units: 716537
value: 999999.0

921218
type: LocalParameter
units: 716537
value: 0.0

921134
type: SpeciesReference
stoichiometry: 1.0
species: 235614

235614
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Demethylmenaquinone_8_C50H70O2

921158
type: SpeciesReference
stoichiometry: 1.0
species: 255962

921146
type: SpeciesReference
stoichiometry: 4.0
species: 251342

921182
type: SpeciesReference
stoichiometry: 1.0
species: 255942

921170
type: SpeciesReference
stoichiometry: 1.0
species: 235634

235634
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Demethylmenaquinol_8_C50H72O2

921194
type: SpeciesReference
stoichiometry: 3.0
species: 251382

313896
type: Reaction
kinetic law: 001237
product: 001225
reactant: 001213
notes: GENE_ASSOCIATION: b0411 PROTEIN_ASSOCIATION: Tsx SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
fast: false
reversible: true
name: R_uridine_transport_via_diffusion__extracellular_to_periplasm_

001298
type: LocalParameter
value: 0.0

001286
type: LocalParameter
units: 716537
value: 0.0

001273
type: LocalParameter
value: 0.0

001261
type: LocalParameter
units: 716537
value: 999999.0

001249
type: LocalParameter
units: 716537
value: -999999.0

001225
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stoichiometry: 1.0
species: 264221

264221
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Uridine_C9H12N2O6

001213
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stoichiometry: 1.0
species: 264201

264201
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Uridine_C9H12N2O6

283359
type: Reaction
kinetic law: 800332
product: 800320
product: 800308
reactant: 800296
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) PROTEIN_ASSOCIATION: ( FadB ) or ( FadJ ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 4.2.1.17
fast: false
reversible: true
name: R_3_hydroxyacyl_CoA_dehydratase__3_hydroxybutanoyl_CoA_

800393
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value: 0.0

800380
type: LocalParameter
units: 716537
value: 0.0

800368
type: LocalParameter
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800356
type: LocalParameter
units: 716537
value: 999999.0

800344
type: LocalParameter
units: 716537
value: -999999.0

800320
type: SpeciesReference
stoichiometry: 1.0
species: 251222

800308
type: SpeciesReference
stoichiometry: 1.0
species: 241903

241903
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Crotonoyl_CoA_C25H36N7O17P3S

800296
type: SpeciesReference
stoichiometry: 1.0
species: 236654

236654
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

308777
type: Reaction
product: 964387
reversible: false
notes: GENE_ASSOCIATION: ( b2677 and b2678 and b2679 ) PROTEIN_ASSOCIATION: ( ProVec and ProW and ProX ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
kinetic law: 964411
fast: false
name: R_L_proline_transport_via_ABC_system__periplasm_
product: 964363
reactant: 964339
reactant: 964351
product: 964399
reactant: 964327
product: 964375

964387
type: SpeciesReference
stoichiometry: 1.0
species: 258902

964472
type: LocalParameter
value: -0.003009

964460
type: LocalParameter
units: 716537
value: 0.0

964447
type: LocalParameter
value: 0.0

964435
type: LocalParameter
units: 716537
value: 999999.0

964423
type: LocalParameter
units: 716537
value: 0.0

964363
type: SpeciesReference
stoichiometry: 1.0
species: 239803

964339
type: SpeciesReference
stoichiometry: 1.0
species: 251222

964351
type: SpeciesReference
stoichiometry: 1.0
species: 259342

259342
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_L_Proline_C5H9NO2

964399
type: SpeciesReference
stoichiometry: 1.0
species: 259322

259322
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Proline_C5H9NO2

964327
type: SpeciesReference
stoichiometry: 1.0
species: 241883

964375
type: SpeciesReference
stoichiometry: 1.0
species: 251342

305657
type: Reaction
reversible: false
reactant: 943847
product: 943859
fast: false
reactant: 943835
name: R_Pyridoxine_5_phosphate_phosphatase
kinetic law: 943883
product: 943871
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:

943847
type: SpeciesReference
stoichiometry: 1.0
species: 257722

257722
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Pyridoxine_5__phosphate_C8H10NO6P

943859
type: SpeciesReference
stoichiometry: 1.0
species: 258902

943835
type: SpeciesReference
stoichiometry: 1.0
species: 251222

943944
type: LocalParameter
value: 0.0

943932
type: LocalParameter
units: 716537
value: 0.0

943920
type: LocalParameter
value: 0.0

943908
type: LocalParameter
units: 716537
value: 999999.0

943896
type: LocalParameter
units: 716537
value: 0.0

943871
type: SpeciesReference
stoichiometry: 1.0
species: 259701

259701
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Pyridoxine_C8H11NO3

291359
type: Reaction
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
product: 843224
reactant: 843188
fast: false
product: 843212
reversible: false
name: R_ferrichrome__minus_Fe__secretion__to_extracellular_
kinetic law: 843236
reactant: 843200

843224
type: SpeciesReference
stoichiometry: 1.0
species: 247623

247623
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Ferrichrome_minus_Fe_III__C27H42N9O12

843188
type: SpeciesReference
stoichiometry: 1.0
species: 247643

247643
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Ferrichrome_minus_Fe_III__C27H42N9O12

843212
type: SpeciesReference
stoichiometry: 1.0
species: 251342

843296
type: LocalParameter
value: 0.0

843284
type: LocalParameter
units: 716537
value: 0.0

843272
type: LocalParameter
value: 0.0

843260
type: LocalParameter
units: 716537
value: 999999.0

843248
type: LocalParameter
units: 716537
value: 0.0

843200
type: SpeciesReference
stoichiometry: 1.0
species: 251382

265461
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_N_Acetyl_D_mannosamine_C8H15NO6

301598
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kinetic law: 909895
product: 909882
reactant: 909870
reactant: 909858
notes: GENE_ASSOCIATION: ( b3182 or b2328 or b2134 ) PROTEIN_ASSOCIATION: ( DacB ) or ( MepA ) or ( PbpG ) SUBSYSTEM: S_Murein_Recycling PROTEIN_CLASS:
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reversible: false

909955
type: LocalParameter
value: 0.0

909943
type: LocalParameter
units: 716537
value: 0.0

909931
type: LocalParameter
value: 0.0

909919
type: LocalParameter
units: 716537
value: 999999.0

909907
type: LocalParameter
units: 716537
value: 0.0

909882
type: SpeciesReference
stoichiometry: 1.0
species: 255522

255522
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034

909870
type: SpeciesReference
stoichiometry: 1.0
species: 255562

255562
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034

909858
type: SpeciesReference
stoichiometry: 1.0
species: 251262

307777
type: Reaction
product: 958135
reactant: 958096
reversible: false
product: 958122
product: 958148
notes: GENE_ASSOCIATION: b3821 PROTEIN_ASSOCIATION: PldA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.4
kinetic law: 958161
name: R_Phospholipase_A2__phosphatidylglycerol__n_C161___periplasm_
fast: false
reactant: 958109

958135
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stoichiometry: 1.0
species: 251382

958096
type: SpeciesReference
stoichiometry: 1.0
species: 251262

958122
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stoichiometry: 1.0
species: 233854

233854
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_1_Acyl_sn_glycero_3_phosphoglycerol__n_C161__C22H42O9P1

958148
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stoichiometry: 1.0
species: 251562

958222
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958210
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units: 716537
value: 0.0

958198
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958186
type: LocalParameter
units: 716537
value: 999999.0

958174
type: LocalParameter
units: 716537
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958109
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stoichiometry: 1.0
species: 258262

258262
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Phosphatidylglycerol__dihexadec_9_enoyl__n_C161__C38H70O10P1

254242
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Maltotetraose_C24H42O21

279840
type: Reaction
reversible: false
kinetic law: 775408
product: 775384
name: R_Carnitinebutyrobetaine_antiporter__periplasm_
reactant: 775360
notes: GENE_ASSOCIATION: b0040 PROTEIN_ASSOCIATION: CaiT SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
fast: false
reactant: 775372
product: 775396

775469
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value: 0.0

775457
type: LocalParameter
units: 716537
value: 0.0

775445
type: LocalParameter
value: 0.0

775433
type: LocalParameter
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775420
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units: 716537
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775384
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stoichiometry: 1.0
species: 243763

243763
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Carnitine_C7H15NO3

775360
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species: 249182

249182
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_gamma_butyrobetaine_C7H15NO2

775372
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species: 243803

243803
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_L_Carnitine_C7H15NO3

775396
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species: 249223

249223
type: Species
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_gamma_butyrobetaine_C7H15NO2

300578
type: Reaction
name: R_L_Lactate_dehydrogenase__ubiquinone_
product: 903818
fast: false
reversible: false
reactant: 903782
kinetic law: 903830
reactant: 903794
notes: GENE_ASSOCIATION: b3605 PROTEIN_ASSOCIATION: LldD SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS: 1.1.2.3
product: 903806

903818
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stoichiometry: 1.0
species: 259781

259781
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Ubiquinol_8_C49H76O4

903782
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stoichiometry: 1.0
species: 253182

253182
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Lactate_C3H5O3

903890
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903878
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value: 0.0

903866
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903854
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903842
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903794
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species: 259761

259761
type: Species
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Ubiquinone_8_C49H74O4

903806
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species: 259721

237823
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_4_Hydroxyphenylacetaldehyde_C8H8O2

263221
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boundary condition: false
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initial amount: NaN
in compartment: 233054

280060
type: Reaction
fast: false
product: 776840
notes: GENE_ASSOCIATION: b0123 PROTEIN_ASSOCIATION: CueO SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
reactant: 776828
kinetic law: 776864
reactant: 776816
reversible: false
product: 776852
reactant: 776804
name: R_Cuprous_Oxidase__Cu1_

776840
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stoichiometry: 4.0
species: 243993

243993
type: Species
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initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Cu2_Cu

776828
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species: 256602

256602
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_O2_O2

776924
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value: 0.0

776912
type: LocalParameter
units: 716537
value: 0.0

776900
type: LocalParameter
value: 0.0

776888
type: LocalParameter
units: 716537
value: 999999.0

776876
type: LocalParameter
units: 716537
value: 0.0

776816
type: SpeciesReference
stoichiometry: 4.0
species: 251382

776852
type: SpeciesReference
stoichiometry: 2.0
species: 251262

776804
type: SpeciesReference
stoichiometry: 4.0
species: 244043

244043
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Cu_Cu

257962
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_phosphatidylethanolamine__dioctadecanoyl__n_C180__C41H82N1O8P1

265961
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_arsenite_AsO3

233514
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_4_alpha_D_glucan_C36H62O31

303397
type: Reaction
reactant: 927480
reactant: 927456
product: 927505
kinetic law: 927529
reactant: 927468
fast: false
name: R_nitric_oxide_dioxygenase
product: 927493
notes: GENE_ASSOCIATION: b2552 PROTEIN_ASSOCIATION: HmpA SUBSYSTEM: S_Nitrogen_Metabolism PROTEIN_CLASS: 1.14.12.17
product: 927517
reversible: false

927480
type: SpeciesReference
stoichiometry: 2.0
species: 256562

927456
type: SpeciesReference
stoichiometry: 1.0
species: 255962

927505
type: SpeciesReference
stoichiometry: 1.0
species: 255942

927590
type: LocalParameter
value: -0.009028

927578
type: LocalParameter
units: 716537
value: 0.0

927566
type: LocalParameter
value: 0.0

927553
type: LocalParameter
units: 716537
value: 999999.0

927541
type: LocalParameter
units: 716537
value: 0.0

927468
type: SpeciesReference
stoichiometry: 2.0
species: 256362

256362
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Nitric_oxide_NO

927493
type: SpeciesReference
stoichiometry: 1.0
species: 251342

927517
type: SpeciesReference
stoichiometry: 2.0
species: 256302

266021
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_butanesulfonate_C4H9O3S

269101
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_myo_Inositol_hexakisphosphate_C6H6O24P6

270481
type: Reaction
kinetic law: 717584
product: 717572
reactant: 717560
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
fast: false
reversible: true
name: R__S__Propane_1_2_diol_facilitated_transport__periplasm_

717644
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value: 0.0

717632
type: LocalParameter
units: 716537
value: 0.0

717620
type: LocalParameter
value: 0.0

717608
type: LocalParameter
units: 716537
value: 999999.0

717596
type: LocalParameter
units: 716537
value: -999999.0

717572
type: SpeciesReference
stoichiometry: 1.0
species: 233434

233434
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M__S__Propane_1_2_diol_C3H8O2

717560
type: SpeciesReference
stoichiometry: 1.0
species: 233474

233474
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M__S__Propane_1_2_diol_C3H8O2

286059
type: Reaction
kinetic law: 813835
product: 813823
reactant: 813811
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Fe_III_dicitrate_exchange

813896
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value: -0.147453

813884
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units: 716537
value: 0.0

813872
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value: 0.0

813860
type: LocalParameter
units: 716537
value: 999999.0

813847
type: LocalParameter
units: 716537
value: 0.0

813823
type: SpeciesReference
stoichiometry: 1.0
species: 267041

267041
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Fe_III_dicitrate_C12H10FeO14

813811
type: SpeciesReference
stoichiometry: 1.0
species: 247323

247323
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Fe_III_dicitrate_C12H10FeO14

241203
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Arabinose_5_phosphate_C5H9O8P

252042
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_L_Homoserine_C4H9NO3

297958
type: Reaction
name: R_Indole_transport_via_proton_symport__reversible__periplasm_
reactant: 887216
reversible: true
kinetic law: 887264
product: 887240
reactant: 887228
product: 887252
fast: false
notes: GENE_ASSOCIATION: b3161 PROTEIN_ASSOCIATION: Mtr SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:

887216
type: SpeciesReference
stoichiometry: 1.0
species: 251382

887325
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887313
type: LocalParameter
units: 716537
value: 0.0

887301
type: LocalParameter
value: 0.0

887289
type: LocalParameter
units: 716537
value: 999999.0

887277
type: LocalParameter
units: 716537
value: -999999.0

887240
type: SpeciesReference
stoichiometry: 1.0
species: 251342

887228
type: SpeciesReference
stoichiometry: 1.0
species: 252642

252642
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Indole_C8H7N

887252
type: SpeciesReference
stoichiometry: 1.0
species: 252602

252602
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Indole_C8H7N

293838
type: Reaction
product: 861217
notes: GENE_ASSOCIATION: b3626 PROTEIN_ASSOCIATION: WaaR SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
kinetic law: 861253
name: R_glucosyltransferase_III__LPS_core_synthesis_
product: 861241
fast: false
reactant: 861192
product: 861229
reactant: 861204
reversible: false

861217
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stoichiometry: 1.0
species: 249482

249482
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

861313
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value: 0.0

861301
type: LocalParameter
units: 716537
value: 0.0

861289
type: LocalParameter
value: 0.0

861277
type: LocalParameter
units: 716537
value: 999999.0

861265
type: LocalParameter
units: 716537
value: 0.0

861241
type: SpeciesReference
stoichiometry: 1.0
species: 263541

861192
type: SpeciesReference
stoichiometry: 1.0
species: 249442

249442
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

861229
type: SpeciesReference
stoichiometry: 1.0
species: 251342

861204
type: SpeciesReference
stoichiometry: 1.0
species: 263601

249762
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Glucuronate_C6H9O7

234854
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Acyl_sn_glycero_3_phosphoethanolamine__n_C160__C21H44NO7P1

236674
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

304317
type: Reaction
reactant: 934867
product: 934903
fast: false
notes: GENE_ASSOCIATION: b2034 PROTEIN_ASSOCIATION: WbbI SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
reactant: 934855
name: R_galactofuranosyltransferase__LPS_O16_antigen_biosynthesis_
kinetic law: 934915
product: 934891
product: 934879
reversible: false

934867
type: SpeciesReference
stoichiometry: 1.0
species: 263721

263721
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

934903
type: SpeciesReference
stoichiometry: 1.0
species: 263541

934855
type: SpeciesReference
stoichiometry: 1.0
species: 249162

249162
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

934975
type: LocalParameter
value: 0.0

934963
type: LocalParameter
units: 716537
value: 0.0

934951
type: LocalParameter
value: 0.0

934939
type: LocalParameter
units: 716537
value: 999999.0

934927
type: LocalParameter
units: 716537
value: 0.0

934891
type: SpeciesReference
stoichiometry: 1.0
species: 251342

934879
type: SpeciesReference
stoichiometry: 1.0
species: 249422

249422
type: Species
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

234314
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_2__3__Cyclic_GMP_C10H11N5O7P

295378
type: Reaction
reversible: false
fast: false
product: 871353
product: 871341
notes: GENE_ASSOCIATION: b3449 PROTEIN_ASSOCIATION: UgpQ SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.4.46
product: 871365
name: R_Glycerophosphodiester_phosphodiesterase__Glycerophosphoserine_
reactant: 871329
kinetic law: 871377
reactant: 871317

871353
type: SpeciesReference
stoichiometry: 1.0
species: 251342

871341
type: SpeciesReference
stoichiometry: 1.0
species: 250302

871365
type: SpeciesReference
stoichiometry: 1.0
species: 260321

871329
type: SpeciesReference
stoichiometry: 1.0
species: 251222

871437
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value: 0.0

871425
type: LocalParameter
units: 716537
value: 0.0

871413
type: LocalParameter
value: 0.0

871401
type: LocalParameter
units: 716537
value: 999999.0

871389
type: LocalParameter
units: 716537
value: 0.0

871317
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stoichiometry: 1.0
species: 248523

248523
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Glycerophosphoserine_C6H13NO8P

241283
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

308517
type: Reaction
kinetic law: 962651
product: 962639
reactant: 962627
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_Phosphonate_transport_via_diffusion__extracellular_to_periplasm_

962711
type: LocalParameter
value: 0.0

962699
type: LocalParameter
units: 716537
value: 0.0

962687
type: LocalParameter
value: 0.0

962675
type: LocalParameter
units: 716537
value: 999999.0

962663
type: LocalParameter
units: 716537
value: -999999.0

962639
type: SpeciesReference
stoichiometry: 1.0
species: 259241

259241
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Phosphonate_HO3P

962627
type: SpeciesReference
stoichiometry: 1.0
species: 259222

259222
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Phosphonate_HO3P

308017
type: Reaction
reactant: 959583
reversible: true
reactant: 959595
product: 959619
kinetic law: 959631
fast: false
notes: GENE_ASSOCIATION: b3115 PROTEIN_ASSOCIATION: TdcD SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 2.7.2.1
product: 959607
name: R_Propionate_kinase

959583
type: SpeciesReference
stoichiometry: 1.0
species: 239803

959595
type: SpeciesReference
stoichiometry: 1.0
species: 259082

259082
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Propanoyl_phosphate_C3H5O5P

959619
type: SpeciesReference
stoichiometry: 1.0
species: 259022

259022
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Propionate__n_C30__C3H5O2

959692
type: LocalParameter
value: 0.0

959680
type: LocalParameter
units: 716537
value: 0.0

959668
type: LocalParameter
value: 0.0

959655
type: LocalParameter
units: 716537
value: 999999.0

959643
type: LocalParameter
units: 716537
value: -999999.0

959607
type: SpeciesReference
stoichiometry: 1.0
species: 241883

294418
type: Reaction
fast: false
notes: GENE_ASSOCIATION: b0507 PROTEIN_ASSOCIATION: Gcl SUBSYSTEM: S_Glyoxylate_Metabolism PROTEIN_CLASS: 4.1.1.47
product: 865295
product: 865283
reactant: 865271
reactant: 865259
kinetic law: 865307
name: R_glyoxalate_carboligase
reversible: false

865295
type: SpeciesReference
stoichiometry: 1.0
species: 243283

865283
type: SpeciesReference
stoichiometry: 1.0
species: 235674

865271
type: SpeciesReference
stoichiometry: 1.0
species: 251342

865259
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stoichiometry: 2.0
species: 250062

865367
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865355
type: LocalParameter
units: 716537
value: 0.0

865343
type: LocalParameter
value: 0.0

865331
type: LocalParameter
units: 716537
value: 999999.0

865319
type: LocalParameter
units: 716537
value: 0.0

279460
type: Reaction
product: 772924
name: R_coprogen_Fe_III___reductase
reactant: 772875
product: 772887
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
kinetic law: 772936
reactant: 772863
product: 772899
fast: false
product: 772912
reversible: false

772924
type: SpeciesReference
stoichiometry: 2.0
species: 251342

772875
type: SpeciesReference
stoichiometry: 1.0
species: 247943

772887
type: SpeciesReference
stoichiometry: 2.0
species: 243623

243623
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_coprogen_unloaded__no_Fe_III___C35H52N6O13

772996
type: LocalParameter
value: -0.023071

772984
type: LocalParameter
units: 716537
value: 0.0

772972
type: LocalParameter
value: 0.0

772960
type: LocalParameter
units: 716537
value: 999999.0

772948
type: LocalParameter
units: 716537
value: 0.0

772863
type: SpeciesReference
stoichiometry: 2.0
species: 243563

243563
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_coprogen_C35H52N6O13Fe

772899
type: SpeciesReference
stoichiometry: 2.0
species: 247203

772912
type: SpeciesReference
stoichiometry: 1.0
species: 247923

268121
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Guanine_C5H5N5O

289359
type: Reaction
kinetic law: 829808
product: 829795
reactant: 829784
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Trehalose_exchange

829867
type: LocalParameter
value: -0.196603

829855
type: LocalParameter
units: 716537
value: 0.0

829843
type: LocalParameter
value: 0.0

829831
type: LocalParameter
units: 716537
value: 999999.0

829819
type: LocalParameter
units: 716537
value: 0.0

829795
type: SpeciesReference
stoichiometry: 1.0
species: 270061

270061
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Trehalose_C12H22O11

829784
type: SpeciesReference
stoichiometry: 1.0
species: 262181

262181
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Trehalose_C12H22O11

294478
type: Reaction
kinetic law: 865778
reversible: false
reactant: 865706
product: 865754
name: R_Glycine_betaine_transport_via_ABC_system__periplasm_
fast: false
reactant: 865718
reactant: 865694
product: 865743
product: 865730
notes: GENE_ASSOCIATION: ( b2128 and b2129 and b2130 and b2131 ) PROTEIN_ASSOCIATION: ( YehW and YehX and YehY and YehZ ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
product: 865766

865839
type: LocalParameter
value: -0.011034

865827
type: LocalParameter
units: 716537
value: 0.0

865815
type: LocalParameter
value: 0.0

865803
type: LocalParameter
units: 716537
value: 999999.0

865791
type: LocalParameter
units: 716537
value: 0.0

865706
type: SpeciesReference
stoichiometry: 1.0
species: 251222

865754
type: SpeciesReference
stoichiometry: 1.0
species: 251342

865718
type: SpeciesReference
stoichiometry: 1.0
species: 250242

250242
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Glycine_betaine_C5H11NO2

865694
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stoichiometry: 1.0
species: 241883

865743
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stoichiometry: 1.0
species: 250202

250202
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Glycine_betaine_C5H11NO2

865730
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stoichiometry: 1.0
species: 239803

865766
type: SpeciesReference
stoichiometry: 1.0
species: 258902

281999
type: Reaction
name: R_Dimethyl_sulfoxide_reductase__Demethylmenaquinol_8_
fast: false
kinetic law: 792003
reversible: false
reactant: 791954
reactant: 791942
product: 791966
notes: GENE_ASSOCIATION: ( b0894 and b0895 and b0896 ) PROTEIN_ASSOCIATION: DmsABC SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS:
product: 791978
product: 791990

792063
type: LocalParameter
value: -0.004012

792051
type: LocalParameter
units: 716537
value: 0.0

792039
type: LocalParameter
value: 0.0

792027
type: LocalParameter
units: 716537
value: 999999.0

792015
type: LocalParameter
units: 716537
value: 0.0

791954
type: SpeciesReference
stoichiometry: 1.0
species: 245783

245783
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Dimethyl_sulfoxide_C2H6OS

791942
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stoichiometry: 1.0
species: 235634

791966
type: SpeciesReference
stoichiometry: 1.0
species: 235614

791978
type: SpeciesReference
stoichiometry: 1.0
species: 245723

245723
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Dimethyl_sulfide_C2H6S

791990
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stoichiometry: 1.0
species: 251222

305697
type: Reaction
product: 944160
product: 944172
product: 944185
reactant: 944136
product: 944148
reactant: 944112
notes: GENE_ASSOCIATION: b0914 PROTEIN_ASSOCIATION: MsbA SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
reversible: false
name: R_phosphatidylethanolamine_transport_via_ABC_system__n_C140__periplasm_
kinetic law: 944197
reactant: 944124
fast: false

944160
type: SpeciesReference
stoichiometry: 1.0
species: 251342

944172
type: SpeciesReference
stoichiometry: 1.0
species: 258902

944185
type: SpeciesReference
stoichiometry: 1.0
species: 257802

257802
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_phosphatidylethanolamine__ditetradecanoyl__n_C140__C33H66N1O8P1

944136
type: SpeciesReference
stoichiometry: 1.0
species: 257782

257782
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_phosphatidylethanolamine__ditetradecanoyl__n_C140__C33H66N1O8P1

944148
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stoichiometry: 1.0
species: 239803

944112
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stoichiometry: 1.0
species: 241883

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units: 716537
value: 0.0

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value: 0.0

944221
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units: 716537
value: 999999.0

944209
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units: 716537
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stoichiometry: 1.0
species: 251222

245583
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Deoxyinosine_C10H12N4O4

250802
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Guanosine_C10H13N5O5

304737
type: Reaction
kinetic law: 937673
product: 937661
reactant: 937649
reactant: 937637
notes: GENE_ASSOCIATION: b0350 PROTEIN_ASSOCIATION: MhpD SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 4.2.1.80
fast: false
reversible: false
name: R_2_oxopent_4_enoate_hydratase

937733
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value: 0.0

937721
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units: 716537
value: 0.0

937709
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value: 0.0

937697
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units: 716537
value: 999999.0

937685
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units: 716537
value: 0.0

937661
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stoichiometry: 1.0
species: 237764

237764
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_4_Hydroxy_2_oxopentanoate_C5H7O4

937649
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species: 257062

257062
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_2_Oxopent_4_enoate_C5H5O3

937637
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stoichiometry: 1.0
species: 251222

238803
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_N_Acetylanthranilate_C9H8NO3

297338
type: Reaction
notes: GENE_ASSOCIATION: ( b2866 and b2867 and b2868 ) PROTEIN_ASSOCIATION: XdhABC SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS:
reversible: false
product: 883426
product: 883414
reactant: 883378
fast: false
reactant: 883402
reactant: 883390
kinetic law: 883450
name: R_hypoxanthine_dehydrogenase
product: 883438

883426
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stoichiometry: 1.0
species: 255962

883414
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stoichiometry: 1.0
species: 251342

883378
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stoichiometry: 1.0
species: 251222

883402
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stoichiometry: 1.0
species: 255942

883390
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stoichiometry: 1.0
species: 252202

883510
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value: 0.0

883498
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units: 716537
value: 0.0

883486
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value: 0.0

883474
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units: 716537
value: 999999.0

883462
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units: 716537
value: 0.0

883438
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stoichiometry: 1.0
species: 264341

264341
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Xanthine_C5H4N4O2

272780
type: Reaction
reactant: 731468
reactant: 731456
notes: GENE_ASSOCIATION: ( b2836 and b1094 ) PROTEIN_ASSOCIATION: ( Aas and AcpP ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 6.2.1.20
name: R_acyl_acyl_carrier_protein_synthetase__n_C140_
kinetic law: 731517
product: 731480
product: 731492
reactant: 731444
fast: false
reversible: false
product: 731505

731468
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stoichiometry: 1.0
species: 262741

262741
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_tetradecanoate__n_C140__C14H27O2

731456
type: SpeciesReference
stoichiometry: 1.0
species: 241883

731578
type: LocalParameter
value: 0.0

731566
type: LocalParameter
units: 716537
value: 0.0

731554
type: LocalParameter
value: 0.0

731541
type: LocalParameter
units: 716537
value: 999999.0

731529
type: LocalParameter
units: 716537
value: 0.0

731480
type: SpeciesReference
stoichiometry: 1.0
species: 240703

731492
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stoichiometry: 1.0
species: 255722

255722
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

731444
type: SpeciesReference
stoichiometry: 1.0
species: 238303

731505
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stoichiometry: 1.0
species: 259141

276480
type: Reaction
reversible: false
reactant: 754017
product: 754041
product: 754053
fast: false
reactant: 754005
notes: GENE_ASSOCIATION: b1640 PROTEIN_ASSOCIATION: AnmK SUBSYSTEM: S_Murein_Recycling PROTEIN_CLASS:
kinetic law: 754077
product: 754065
name: R_1_6_anhydrous_N_Acetylmuramate_kinase
reactant: 754029

754017
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stoichiometry: 1.0
species: 241883

754041
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stoichiometry: 1.0
species: 239263

239263
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_N_acetylmuramate_6_phosphate_C11H17NO11P

754053
type: SpeciesReference
stoichiometry: 1.0
species: 239803

754005
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stoichiometry: 1.0
species: 240943

240943
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_6_anhydrous_N_Acetylmuramate_C11H16NO7

754137
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value: 0.0

754125
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units: 716537
value: 0.0

754113
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value: 0.0

754101
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units: 716537
value: 999999.0

754089
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units: 716537
value: 0.0

754065
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stoichiometry: 1.0
species: 251342

754029
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stoichiometry: 1.0
species: 251222

291299
type: Reaction
product: 842813
product: 842789
reactant: 842765
reactant: 842753
product: 842801
product: 842777
kinetic law: 842825
reversible: false
fast: false
name: R_Ferrichrome_reductase
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:

842813
type: SpeciesReference
stoichiometry: 2.0
species: 251342

842789
type: SpeciesReference
stoichiometry: 2.0
species: 247203

842765
type: SpeciesReference
stoichiometry: 2.0
species: 247543

247543
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Ferrichrome_C27H42FeN9O12

842753
type: SpeciesReference
stoichiometry: 1.0
species: 247063

842801
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stoichiometry: 2.0
species: 247603

247603
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Ferrichrome_minus_Fe_III__C27H42N9O12

842777
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stoichiometry: 1.0
species: 247043

842886
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value: -0.012538

842873
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units: 716537
value: 0.0

842861
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value: 0.0

842849
type: LocalParameter
units: 716537
value: 999999.0

842837
type: LocalParameter
units: 716537
value: 0.0

311117
type: Reaction
reactant: 978916
name: R_O_succinylhomoserine_lyase__L_cysteine_
kinetic law: 978976
product: 978964
notes: GENE_ASSOCIATION: b3939 PROTEIN_ASSOCIATION: MetB SUBSYSTEM: S_Methionine_Metabolism PROTEIN_CLASS: 4.2.99.9
fast: false
reversible: false
reactant: 978928
product: 978952
product: 978940

978916
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stoichiometry: 1.0
species: 244243

244243
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Cysteine_C3H7NO2S

979038
type: LocalParameter
value: 0.0

979025
type: LocalParameter
units: 716537
value: 0.113395

979013
type: LocalParameter
value: 0.0

979001
type: LocalParameter
units: 716537
value: 999999.0

978989
type: LocalParameter
units: 716537
value: 0.0

978964
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stoichiometry: 1.0
species: 260841

978928
type: SpeciesReference
stoichiometry: 1.0
species: 260961

260961
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_O_Succinyl_L_homoserine_C8H12NO6

978952
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stoichiometry: 1.0
species: 251342

978940
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stoichiometry: 1.0
species: 244303

244303
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Cystathionine_C7H14N2O4S

287439
type: Reaction
kinetic law: 820518
product: 820506
reactant: 820494
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Idonate_exchange

820579
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value: -0.09128

820567
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units: 716537
value: 0.0

820555
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value: 0.0

820542
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units: 716537
value: 999999.0

820530
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units: 716537
value: 0.0

820506
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stoichiometry: 1.0
species: 268441

268441
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Idonate_C6H11O7

820494
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stoichiometry: 1.0
species: 252382

252382
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Idonate_C6H11O7

289099
type: Reaction
kinetic law: 828552
product: 828540
reactant: 828528
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Succinate_exchange

828612
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value: -0.05216

828600
type: LocalParameter
units: 716537
value: 0.0

828588
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value: 0.0

828576
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units: 716537
value: 999999.0

828564
type: LocalParameter
units: 716537
value: 0.0

828540
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stoichiometry: 1.0
species: 269940

269940
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Succinate_C4H4O4

828528
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stoichiometry: 1.0
species: 260861

260861
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Succinate_C4H4O4

252022
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Homoserine_C4H9NO3

255462
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034

270600
type: Reaction
kinetic law: 718225
product: 718213
reactant: 718201
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_23cUMP_transport_via_diffusion__extracellular_to_periplasm_

718285
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value: 0.0

718273
type: LocalParameter
units: 716537
value: 0.0

718261
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value: 0.0

718249
type: LocalParameter
units: 716537
value: 999999.0

718237
type: LocalParameter
units: 716537
value: -999999.0

718213
type: SpeciesReference
stoichiometry: 1.0
species: 234354

718201
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stoichiometry: 1.0
species: 234334

234334
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_2__3__Cyclic_UMP_C9H10N2O8P

274220
type: Reaction
fast: false
reactant: 740171
reactant: 740159
reversible: true
kinetic law: 740208
product: 740195
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
name: R_acetate_reversible_transport_via_proton_symport__periplasm_
product: 740183

740171
type: SpeciesReference
stoichiometry: 1.0
species: 251382

740159
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stoichiometry: 1.0
species: 238663

238663
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Acetate_C2H3O2

740270
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value: 0.0

740256
type: LocalParameter
units: 716537
value: 0.0

740244
type: LocalParameter
value: 0.0

740232
type: LocalParameter
units: 716537
value: 999999.0

740220
type: LocalParameter
units: 716537
value: -999999.0

740195
type: SpeciesReference
stoichiometry: 1.0
species: 251342

740183
type: SpeciesReference
stoichiometry: 1.0
species: 238623

238623
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Acetate_C2H3O2

269741
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Phosphonate_HO3P

276580
type: Reaction
name: R_Ap4A_hydrolase
reactant: 754681
reactant: 754693
product: 754717
kinetic law: 754729
notes: GENE_ASSOCIATION: b0049 PROTEIN_ASSOCIATION: ApaH SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.6.1.41
fast: false
reversible: false
product: 754705

754681
type: SpeciesReference
stoichiometry: 1.0
species: 240983

240983
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

754693
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stoichiometry: 1.0
species: 251222

754717
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stoichiometry: 2.0
species: 251342

754789
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value: 0.0

754777
type: LocalParameter
units: 716537
value: 0.0

754765
type: LocalParameter
value: 0.0

754753
type: LocalParameter
units: 716537
value: 999999.0

754741
type: LocalParameter
units: 716537
value: 0.0

754705
type: SpeciesReference
stoichiometry: 2.0
species: 239803

303737
type: Reaction
kinetic law: 930270
fast: false
product: 930246
product: 930258
reversible: false
reactant: 930234
notes: GENE_ASSOCIATION: b2744 PROTEIN_ASSOCIATION: SurE SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.3.5
name: R_5__nucleotidase__AMP_
reactant: 930222

930330
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value: -0.004012

930318
type: LocalParameter
units: 716537
value: 0.0

930306
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value: 0.0

930294
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units: 716537
value: 999999.0

930282
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units: 716537
value: 0.0

930246
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stoichiometry: 1.0
species: 239643

239643
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Adenosine_C10H13N5O4

930258
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stoichiometry: 1.0
species: 258902

930234
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stoichiometry: 1.0
species: 251222

930222
type: SpeciesReference
stoichiometry: 1.0
species: 240703

298878
type: Reaction
reactant: 892876
reversible: true
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Methylglyoxal_Metabolism PROTEIN_CLASS: 1.1.1.77
fast: false
kinetic law: 892937
product: 892925
name: R_lacaldehyde_reductase__R_propane_1_2_diol_forming_
product: 892912
reactant: 892888
reactant: 892900

892876
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stoichiometry: 1.0
species: 251342

892997
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value: 0.0

892985
type: LocalParameter
units: 716537
value: 0.0

892973
type: LocalParameter
value: 0.0

892961
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units: 716537
value: 999999.0

892949
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units: 716537
value: -999999.0

892925
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stoichiometry: 1.0
species: 255942

892912
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stoichiometry: 1.0
species: 233374

233374
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M__R__Propane_1_2_diol_C3H8O2

892888
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stoichiometry: 1.0
species: 253242

253242
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Lactaldehyde_C3H6O2

892900
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stoichiometry: 1.0
species: 255962

253022
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

259402
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_5_Phospho_alpha_D_ribose_1_diphosphate_C5H8O14P3

246563
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233034

304477
type: Reaction
kinetic law: 936039
product: 936026
reactant: 936014
notes: GENE_ASSOCIATION: b2344 PROTEIN_ASSOCIATION: FadL SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
fast: false
reversible: false
name: R_Octadecenoate__n_C181__transport_via_facilitated_irreversible_diffusion__extracellular_to_periplasm_

936104
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value: 0.0

936091
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units: 716537
value: 0.0

936078
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936065
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units: 716537
value: 999999.0

936052
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units: 716537
value: 0.0

936026
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stoichiometry: 1.0
species: 256882

936014
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stoichiometry: 1.0
species: 256862

256862
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_octadecenoate__n_C181__C18H33O2

286199
type: Reaction
kinetic law: 814519
product: 814507
reactant: 814495
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_ferroxamine_exchange

814579
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value: 0.0

814567
type: LocalParameter
units: 716537
value: 0.0

814555
type: LocalParameter
value: 0.0

814543
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value: 999999.0

814531
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units: 716537
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814507
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stoichiometry: 1.0
species: 267181

267181
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_ferroxamine_C25H46FeN6O8

814495
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stoichiometry: 1.0
species: 247743

247743
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_ferroxamine_C25H46FeN6O8

267701
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boundary condition: true
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initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_GDP_C10H12N5O11P2

254882
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_magnesium_Mg

292598
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reversible: false
reactant: 853437
product: 853474
name: R_glutamate_5_semialdehyde_dehydrogenase
notes: GENE_ASSOCIATION: b0243 PROTEIN_ASSOCIATION: ProA SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 1.2.1.41
product: 853486
reactant: 853450
fast: false
product: 853498
kinetic law: 853510
reactant: 853462

853437
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species: 249902

249902
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Glutamate_5_phosphate_C5H8NO7P

853474
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species: 249922

249922
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initial amount: NaN
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boundary condition: false
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initial amount: NaN
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initial concentration: NaN
initial amount: NaN
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295198
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kinetic law: 870192
product: 870179
reactant: 870167
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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units: 716537
value: -999999.0

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species: 250662

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_GMP_C10H12N5O8P

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initial amount: NaN
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303018
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kinetic law: 924336
product: 924324
reactant: 924312
notes: GENE_ASSOCIATION: ( s0001 or b0451 ) PROTEIN_ASSOCIATION: ( SPONTANEOUS ) or ( AmtB ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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reversible: true
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value: 7.944612

924373
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value: 999999.0

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units: 716537
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species: 256042

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species: 256082

256082
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Ammonium_H4N

267781
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Glucuronate_1_phosphate_C6H8O10P

247683
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Fe_enterobactin_C30H27FeN3O15

256322
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Nitrate_NO3

301958
type: Reaction
notes: GENE_ASSOCIATION: ( b4019 or b3829 ) PROTEIN_ASSOCIATION: ( MetH ) or ( MetE ) SUBSYSTEM: S_Methionine_Metabolism PROTEIN_CLASS: 2.1.1.13
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product: 912122
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kinetic law: 912134
fast: false
product: 912098
reactant: 912086
reversible: false
reactant: 912074

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species: 254642

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species: 261561

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value: 0.113724

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value: 999999.0

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units: 716537
value: 0.0

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stoichiometry: 1.0
species: 251342

912086
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stoichiometry: 1.0
species: 251442

251442
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Homocysteine_C4H9NO2S

912074
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stoichiometry: 1.0
species: 238144

238144
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_5_Methyltetrahydrofolate_C20H24N7O6

244343
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Cytidine_C9H13N3O5

248762
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_D_Galactarate_C6H8O8

282779
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reactant: 796527
product: 796575
fast: false
reversible: false
name: R_enoyl_acyl_carrier_protein_reductase__NADPH___n_C100_
product: 796563
reactant: 796551
notes: GENE_ASSOCIATION: b1288 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.3.1.10
kinetic law: 796587
reactant: 796539

796527
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stoichiometry: 1.0
species: 251342

796575
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stoichiometry: 1.0
species: 255982

796563
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stoichiometry: 1.0
species: 244643

244643
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

796551
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stoichiometry: 1.0
species: 261481

261481
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

796648
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value: 0.0

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units: 716537
value: 999999.0

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units: 716537
value: 0.0

796539
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stoichiometry: 1.0
species: 256002

276220
type: Reaction
notes: GENE_ASSOCIATION: b3416 PROTEIN_ASSOCIATION: MalQ SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 2.4.1.25
reactant: 752459
product: 752483
name: R_Amylomaltase__maltotetraose_
kinetic law: 752495
product: 752471
reversible: false
reactant: 752446
fast: false

752459
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species: 254222

254222
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Maltotetraose_C24H42O21

752483
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stoichiometry: 1.0
species: 254102

254102
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Maltopentaose_C30H52O26

752555
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752543
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units: 716537
value: 0.0

752531
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752519
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752507
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units: 716537
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stoichiometry: 1.0
species: 249522

249522
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_D_Glucose_C6H12O6

752446
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species: 253962

253962
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Maltose_C12H22O11

306437
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product: 949415
reactant: 949391
reversible: false
fast: false
kinetic law: 949440
name: R_phosphatidylglycerol_phosphate_phosphatase__n_C140_
notes: GENE_ASSOCIATION: ( b0418 or b1278 ) PROTEIN_ASSOCIATION: ( PgpA ) or ( PgpB ) SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.3.27
product: 949427
reactant: 949403

949415
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stoichiometry: 1.0
species: 258122

258122
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Phosphatidylglycerol__ditetradecanoyl__n_C140__C34H66O10P1

949391
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stoichiometry: 1.0
species: 251222

949500
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value: -0.007022

949488
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units: 716537
value: 0.0

949476
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value: 0.0

949464
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units: 716537
value: 999999.0

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units: 716537
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species: 258902

949403
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stoichiometry: 1.0
species: 258402

258402
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Phosphatidylglycerophosphate__ditetradecanoyl__n_C140__C34H65O13P2

287019
type: Reaction
kinetic law: 818488
product: 818476
reactant: 818464
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Glycolate_exchange

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value: -0.022068

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units: 716537
value: 0.0

818524
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818512
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units: 716537
value: 999999.0

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units: 716537
value: 0.0

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stoichiometry: 1.0
species: 268001

268001
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Glycolate_C2H3O3

818464
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stoichiometry: 1.0
species: 250482

250482
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Glycolate_C2H3O3

265041
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_3__AMP_C10H12N5O7P

280420
type: Reaction
name: R_L_cysteine_sulfinic_acid_desulfurase
fast: false
notes: GENE_ASSOCIATION: b2810 PROTEIN_ASSOCIATION: CsdA SUBSYSTEM: S_Cysteine_Metabolism PROTEIN_CLASS: 4.1.1.12
product: 779058
reactant: 779046
kinetic law: 779082
product: 779070
reversible: false
reactant: 779034

779058
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stoichiometry: 1.0
species: 240283

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stoichiometry: 2.0
species: 251342

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779130
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units: 716537
value: 0.0

779118
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779106
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units: 716537
value: 999999.0

779094
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units: 716537
value: 0.0

779070
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stoichiometry: 1.0
species: 260561

260561
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_sulfur_dioxide_O2S

779034
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stoichiometry: 1.0
species: 237624

237624
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_3_Sulfino_L_alanine_C3H5NO4S

253002
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_KDO_2__lipid_IV_A__C84H148N2O37P2

252662
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_myo_Inositol_C6H12O6

242303
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_N_Carbamoyl_L_aspartate_C5H6N2O5

300958
type: Reaction
product: 906181
product: 906217
reactant: 906169
kinetic law: 906229
fast: false
name: R_maltose_transport_via_ABC_system__periplasm_
notes: GENE_ASSOCIATION: ( b4034 and b4033 and b4032 and b4035 ) PROTEIN_ASSOCIATION: ( MalE and MalF and MalG and MalK ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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product: 906205
reversible: false
reactant: 906157
product: 906193

906181
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stoichiometry: 1.0
species: 239803

906217
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stoichiometry: 1.0
species: 258902

906169
type: SpeciesReference
stoichiometry: 1.0
species: 254002

254002
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Maltose_C12H22O11

906289
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value: 0.0

906277
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units: 716537
value: 0.0

906265
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906253
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units: 716537
value: 999999.0

906241
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units: 716537
value: 0.0

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stoichiometry: 1.0
species: 241883

906205
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species: 253962

906157
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stoichiometry: 1.0
species: 251222

906193
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species: 251342

275600
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reversible: false
reactant: 748519
fast: false
product: 748556
reactant: 748532
notes: GENE_ASSOCIATION: ( b0870 or b2551 ) PROTEIN_ASSOCIATION: ( LtaE ) or ( GlyA ) SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
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product: 748544
kinetic law: 748568

748519
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stoichiometry: 1.0
species: 240283

748556
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stoichiometry: 1.0
species: 259721

748532
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stoichiometry: 1.0
species: 259681

259681
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Pyridoxal_5__phosphate_C8H8NO6P

748544
type: SpeciesReference
stoichiometry: 1.0
species: 259641

748628
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value: -0.016049

748616
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units: 716537
value: 0.0

748604
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748592
type: LocalParameter
units: 716537
value: 999999.0

748580
type: LocalParameter
units: 716537
value: 0.0

313557
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kinetic law: 997181
product: 997169
reactant: 997157
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_UDPglucose_transport_via_diffusion__extracellular_to_periplasm_

997241
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value: 0.0

997229
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units: 716537
value: 0.0

997217
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value: 0.0

997205
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units: 716537
value: 999999.0

997193
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units: 716537
value: -999999.0

997169
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stoichiometry: 1.0
species: 263641

263641
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_UDPglucose_C15H22N2O17P2

997157
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stoichiometry: 1.0
species: 263621

263621
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_UDPglucose_C15H22N2O17P2

235954
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_2_octadec_11_enoyl_sn_glycerol_3_phosphate_C21H40O7P1

312177
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product: 985395
notes: GENE_ASSOCIATION: ( b1602 and b1603 ) PROTEIN_ASSOCIATION: Pnt SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS: 1.6.1.1
product: 985407
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product: 985383
reactant: 985371
reversible: false
reactant: 985359
reactant: 985347
kinetic law: 985419
fast: false

985395
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species: 255942

985407
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species: 256002

985383
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species: 251342

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species: 251382

985359
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species: 255982

985347
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species: 255962

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985467
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units: 716537
value: 0.0

985455
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985443
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units: 716537
value: 999999.0

985431
type: LocalParameter
units: 716537
value: 0.0

245983
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_protein_disulfide_isomerase_II__reduced__XH2

286859
type: Reaction
kinetic law: 817708
product: 817696
reactant: 817684
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Glutamate_exchange

817768
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value: -0.072222

817756
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units: 716537
value: 0.0

817744
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817732
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value: 999999.0

817720
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units: 716537
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817696
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stoichiometry: 1.0
species: 267841

267841
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Glutamate_C5H8NO4

817684
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species: 249982

249982
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Glutamate_C5H8NO4

242383
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Cob_I_alamin_C62H88CoN13O14P

278740
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kinetic law: 768707
product: 768695
reactant: 768683
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_choline_transport_via_diffusion__extracellular_to_periplasm_

768767
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value: 0.0

768755
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units: 716537
value: 0.0

768743
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768731
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units: 716537
value: 999999.0

768719
type: LocalParameter
units: 716537
value: -999999.0

768695
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stoichiometry: 1.0
species: 242863

242863
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Choline_C5H14NO

768683
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stoichiometry: 1.0
species: 242843

242843
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Choline_C5H14NO

267381
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_sn_Glycero_3_phosphoethanolamine_C5H14NO6P

280580
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name: R_Cytidine_hydrolase
kinetic law: 780550
reversible: false
product: 780525
reactant: 780513
fast: false
product: 780538
reactant: 780501
notes: GENE_ASSOCIATION: ( b2162 or b0651 or b0030 ) PROTEIN_ASSOCIATION: ( RihB ) or ( RihA ) or ( RihC ) SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 3.2.2.8

780610
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780598
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value: 0.0

780586
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780574
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value: 999999.0

780562
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units: 716537
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780525
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stoichiometry: 1.0
species: 243843

243843
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Cytosine_C4H5N3O

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initial amount: NaN
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boundary condition: false
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initial amount: NaN
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name: M_D_Gluconate_C6H11O7

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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Sodium_Na

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_L_Tryptophan_C11H12N2O2

293118
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reactant: 856573
kinetic law: 856633
reactant: 856549
product: 856585
reversible: false
notes: GENE_ASSOCIATION: ( b2149 and b2150 and b2148 ) PROTEIN_ASSOCIATION: ( MglA and MglB and MglC ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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product: 856609
reactant: 856561
name: R_D_galactose_transport_via_ABC_system__periplasm_
product: 856597
fast: false

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species: 248703

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value: 999999.0

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units: 716537
value: 0.0

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species: 241883

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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Galactose_C6H12O6

289719
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kinetic law: 831547
product: 831535
reactant: 831523
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_L_Valine_exchange

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units: 716537
value: 0.0

831583
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831571
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units: 716537
value: 999999.0

831559
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units: 716537
value: 0.0

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species: 270241

270241
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Valine_C5H11NO2

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species: 264281

264281
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Valine_C5H11NO2

276160
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fast: false
reactant: 752083
name: R_anhydrous_N_Acetylmuramyl_tetrapeptide_amidase
product: 752119
notes: GENE_ASSOCIATION: b0110 PROTEIN_ASSOCIATION: AmpD SUBSYSTEM: S_Murein_Recycling PROTEIN_CLASS:
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product: 752107
reversible: false
kinetic law: 752131

752083
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stoichiometry: 1.0
species: 240923

240923
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_6_anhydrous_N_Acetylmuramyl_tetrapeptide_C29H44N6O15

752119
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species: 240943

752095
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species: 238323

238323
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_alanine_D_glutamate_meso_2_6_diaminoheptanedioate_D_alanine_C18H30N5O9

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units: 716537
value: 0.0

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752155
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units: 716537
value: 999999.0

752143
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units: 716537
value: 0.0

276500
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product: 754186
notes: GENE_ASSOCIATION: b1263 PROTEIN_ASSOCIATION: TrpDec SUBSYSTEM: S_Tyrosine__Tryptophan__and_Phenylalanine_Metabolism PROTEIN_CLASS: 2.4.2.18
fast: false
reversible: false
name: R_anthranilate_phosphoribosyltransferase
kinetic law: 754198
product: 754174
reactant: 754149
reactant: 754161

754186
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species: 259262

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_N__5_Phospho_D_ribosyl_anthranilate_C12H13NO9P

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value: 0.041874

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value: 0.0

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species: 240963

240963
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Anthranilate_C7H6NO2

754161
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stoichiometry: 1.0
species: 259402

314137
type: Reaction
reactant: 004172
product: 004184
fast: false
reactant: 004160
notes: GENE_ASSOCIATION: b4031 PROTEIN_ASSOCIATION: XylE SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
reversible: false
name: R_D_xylose_transport_in_via_proton_symport__periplasm_
product: 004196
kinetic law: 004208

004172
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species: 264641

264641
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_D_Xylose_C5H10O5

004184
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stoichiometry: 1.0
species: 251342

004160
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stoichiometry: 1.0
species: 251382

004196
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stoichiometry: 1.0
species: 264601

264601
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Xylose_C5H10O5

004269
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004257
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004245
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004233
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units: 716537
value: 999999.0

004220
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units: 716537
value: 0.0

307237
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name: R_Phospholipase_A1__phosphatidylethanolamine__n_C180___periplasm_
product: 954548
reactant: 954512
product: 954560
reactant: 954524
fast: false
product: 954536
kinetic law: 954572
reversible: false
notes: GENE_ASSOCIATION: b3821 PROTEIN_ASSOCIATION: PldA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.32

954548
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species: 251382

954512
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species: 251262

954560
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species: 256822

256822
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_octadecanoate__n_C180__C18H35O2

954524
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stoichiometry: 1.0
species: 257962

954536
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stoichiometry: 1.0
species: 234954

234954
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_2_Acyl_sn_glycero_3_phosphoethanolamine__n_C180__C23H48NO7P1

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954620
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units: 716537
value: 0.0

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954596
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units: 716537
value: 999999.0

954584
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units: 716537
value: 0.0

305497
type: Reaction
name: R_phospho_N_acetylmuramoyl_pentapeptide_transferase__meso_2_6_diaminopimelate_
kinetic law: 942766
reactant: 942717
fast: false
reactant: 942729
product: 942754
notes: GENE_ASSOCIATION: b0087 PROTEIN_ASSOCIATION: MraY SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 2.7.8.13
reversible: false
product: 942742

942829
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942816
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units: 716537
value: 0.020466

942803
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942791
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value: 999999.0

942779
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species: 263441

263441
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Undecaprenyl_phosphate_C55H89O4P

942729
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species: 263821

263821
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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942754
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species: 263861

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initial amount: NaN
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278360
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reactant: 766252
reversible: false
reactant: 766239
kinetic law: 766290
product: 766265
fast: false
name: R_cadmium__Cd2__transport_out_via_proton_antiport__periplasm_
product: 766278
notes: GENE_ASSOCIATION: ( b0752 or b3915 ) PROTEIN_ASSOCIATION: ( ZitB ) or ( FieF ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:

766252
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species: 251382

766239
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stoichiometry: 1.0
species: 242463

242463
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Cadmium_Cd

766350
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value: -0.001003

766338
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units: 716537
value: 0.0

766326
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value: 999999.0

766302
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units: 716537
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species: 251342

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species: 242503

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boundary condition: false
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initial amount: NaN
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name: M_Cadmium_Cd

250042
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Glutamyl_tRNA_Glu__C5H7NO3R

312977
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kinetic law: 991343
fast: false
name: R_tryptophan_synthase__indoleglycerol_phosphate_
notes: GENE_ASSOCIATION: ( b1260 and b1261 ) PROTEIN_ASSOCIATION: TrpA SUBSYSTEM: S_Tyrosine__Tryptophan__and_Phenylalanine_Metabolism PROTEIN_CLASS: 4.2.1.20
product: 991319
reactant: 991295
reactant: 991282
product: 991331
reversible: false
product: 991307

991403
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991391
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units: 716537
value: 0.0

991379
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991367
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units: 716537
value: 999999.0

991355
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units: 716537
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991319
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species: 251222

991295
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species: 260321

991282
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stoichiometry: 1.0
species: 237154

237154
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_C___3_Indolyl__glycerol_3_phosphate_C11H12NO6P

991331
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species: 262601

262601
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_L_Tryptophan_C11H12N2O2

991307
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species: 248363

248363
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Glyceraldehyde_3_phosphate_C3H5O6P

293318
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reactant: 857913
product: 857949
reversible: false
fast: false
name: R_Glycolaldehyde_dehydrogenase
reactant: 857901
product: 857937
notes: GENE_ASSOCIATION: b1415 PROTEIN_ASSOCIATION: AldA SUBSYSTEM: S_Folate_Metabolism PROTEIN_CLASS: 1.2.1.21
kinetic law: 857961
product: 857925
reactant: 857888

857913
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stoichiometry: 1.0
species: 255942

857949
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stoichiometry: 1.0
species: 255962

857901
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stoichiometry: 1.0
species: 251222

857937
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stoichiometry: 2.0
species: 251342

858021
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value: 0.0

858009
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units: 716537
value: 4.93E-4

857997
type: LocalParameter
value: 0.0

857985
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units: 716537
value: 999999.0

857973
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units: 716537
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species: 250462

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species: 249242

249242
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Glycolaldehyde_C2H4O2

297018
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reactant: 881450
reactant: 881462
notes: GENE_ASSOCIATION: b3805 PROTEIN_ASSOCIATION: HemCec SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 4.3.1.8
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name: R_hydroxymethylbilane_synthase
product: 881486
kinetic law: 881498
product: 881474
reversible: false

881450
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stoichiometry: 1.0
species: 251222

881462
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stoichiometry: 4.0
species: 259101

259101
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Porphobilinogen_C10H13N2O4

881486
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stoichiometry: 4.0
species: 256042

881558
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value: 0.0

881546
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units: 716537
value: 3.29E-4

881534
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value: 0.0

881522
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units: 716537
value: 999999.0

881510
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units: 716537
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species: 251942

251942
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Hydroxymethylbilane_C40H38N4O17

313096
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kinetic law: 992420
product: 992408
reactant: 992396
notes: GENE_ASSOCIATION: b2344 PROTEIN_ASSOCIATION: FadL SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
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reversible: false
name: R_Tetradecanoate_transport_via_facilitated_irreversible_diffusion__extracellular_to_periplasm_

992480
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992468
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value: 0.0

992456
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992444
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992432
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units: 716537
value: 0.0

992408
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species: 262781

992396
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species: 262761

273020
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kinetic law: 733148
product: 733136
reactant: 733124
notes: GENE_ASSOCIATION: b3571 PROTEIN_ASSOCIATION: MalS SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
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reversible: false
name: R_alpha_amylase__periplasm_

733209
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value: 0.0

733197
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units: 716537
value: 0.0

733185
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733173
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733160
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units: 716537
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species: 254082

254082
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Maltohexaose_C36H62O31

733124
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stoichiometry: 1.0
species: 233554

233554
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_1_4_alpha_D_glucan_C36H62O31

289459
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kinetic law: 830292
product: 830280
reactant: 830268
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_tungstate_exchange

830353
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value: 0.0

830341
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units: 716537
value: 0.0

830329
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830316
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units: 716537
value: 999999.0

830304
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units: 716537
value: -999999.0

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stoichiometry: 1.0
species: 270120

270120
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_tungstate_O4W1

830268
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species: 262881

262881
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initial concentration: NaN
initial amount: NaN
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name: M_tungstate_O4W1

239543
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Acetoacetyl_ACP_C15H25N2O9PRS

244743
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_N6__1_2_Dicarboxyethyl__AMP_C14H14N5O11P

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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_4_Aminobutanal_C4H10NO

296138
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kinetic law: 876005
product: 875993
reactant: 875981
notes: GENE_ASSOCIATION: s0001 PROTEIN_ASSOCIATION: SPONTANEOUS SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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reversible: false
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876041
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876029
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876017
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species: 251322

251322
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Hydrogen_sulfide_H2S

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species: 251282

251282
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Hydrogen_sulfide_H2S

249602
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boundary condition: false
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initial amount: NaN
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name: M_D_Gluconate_C6H11O7

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boundary condition: false
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initial concentration: NaN
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name: M_glutaredoxin__oxidized__X

271860
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kinetic law: 725458
product: 725446
product: 725434
reactant: 725422
notes: GENE_ASSOCIATION: ( b0954 or b0180 ) PROTEIN_ASSOCIATION: ( FabA ) or ( FabZ ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 4.2.1.58
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reversible: false
name: R_3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C80_

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725506
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value: 0.262148

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725482
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species: 262061

262061
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725434
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species: 251222

725422
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species: 236994

236994
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

264441
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Xanthosine_5__phosphate_C10H11N4O9P

284859
type: Reaction
kinetic law: 808026
product: 808014
reactant: 808002
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Arabinose_exchange

808087
type: LocalParameter
value: -0.079243

808075
type: LocalParameter
units: 716537
value: 0.0

808062
type: LocalParameter
value: 0.0

808050
type: LocalParameter
units: 716537
value: 999999.0

808038
type: LocalParameter
units: 716537
value: 0.0

808014
type: SpeciesReference
stoichiometry: 1.0
species: 265841

265841
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Arabinose_C5H10O5

808002
type: SpeciesReference
stoichiometry: 1.0
species: 241243

241243
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Arabinose_C5H10O5

268801
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Malate_C4H4O5

291119
type: Reaction
product: 841626
reactant: 841602
reactant: 841590
fast: false
name: R_Fe_III_hydroxamate_reductase
product: 841638
product: 841650
product: 841614
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
reversible: false
kinetic law: 841662

841626
type: SpeciesReference
stoichiometry: 2.0
species: 247483

247483
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Fe_III_hydoxamate__unloaded_C9H18O6N3

841602
type: SpeciesReference
stoichiometry: 1.0
species: 259901

841590
type: SpeciesReference
stoichiometry: 2.0
species: 247423

247423
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Fe_III_hydroxamate_C9H18O6N3Fe

841638
type: SpeciesReference
stoichiometry: 2.0
species: 251342

841650
type: SpeciesReference
stoichiometry: 1.0
species: 260001

841614
type: SpeciesReference
stoichiometry: 2.0
species: 247203

841722
type: LocalParameter
value: 0.0

841710
type: LocalParameter
units: 716537
value: 0.0

841698
type: LocalParameter
value: 0.0

841686
type: LocalParameter
units: 716537
value: 999999.0

841674
type: LocalParameter
units: 716537
value: 0.0

286279
type: Reaction
kinetic law: 814906
product: 814894
reactant: 814881
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_fructoselysine_exchange

814966
type: LocalParameter
value: -0.214659

814954
type: LocalParameter
units: 716537
value: 0.0

814942
type: LocalParameter
value: 0.0

814930
type: LocalParameter
units: 716537
value: 999999.0

814918
type: LocalParameter
units: 716537
value: 0.0

814894
type: SpeciesReference
stoichiometry: 1.0
species: 267261

267261
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_fructoselysine_C12H25N2O7

814881
type: SpeciesReference
stoichiometry: 1.0
species: 248163

248163
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_fructoselysine_C12H25N2O7

259001
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M__R__Pantothenate_C9H16NO5

306017
type: Reaction
product: 946451
fast: false
reactant: 946378
name: R_phosphatidylglycerol_transport_via_ABC_system__n_C141__periplasm_
notes: GENE_ASSOCIATION: b0914 PROTEIN_ASSOCIATION: MsbA SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
reactant: 946403
product: 946439
reactant: 946391
reversible: false
product: 946427
product: 946415
kinetic law: 946463

946451
type: SpeciesReference
stoichiometry: 1.0
species: 258182

946378
type: SpeciesReference
stoichiometry: 1.0
species: 241883

946403
type: SpeciesReference
stoichiometry: 1.0
species: 258162

258162
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Phosphatidylglycerol__ditetradec_7_enoyl__n_C141__C34H62O10P1

946439
type: SpeciesReference
stoichiometry: 1.0
species: 258902

946391
type: SpeciesReference
stoichiometry: 1.0
species: 251222

946427
type: SpeciesReference
stoichiometry: 1.0
species: 251342

946415
type: SpeciesReference
stoichiometry: 1.0
species: 239803

946525
type: LocalParameter
value: 0.0

946513
type: LocalParameter
units: 716537
value: 0.0

946500
type: LocalParameter
value: 0.0

946487
type: LocalParameter
units: 716537
value: 999999.0

946475
type: LocalParameter
units: 716537
value: 0.0

280000
type: Reaction
reactant: 776340
product: 776416
product: 776379
notes: GENE_ASSOCIATION: ( b2677 and b2678 and b2679 ) PROTEIN_ASSOCIATION: ( ProVec and ProW and ProX ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
name: R_crotonobetaine_transport_via_ABC_system__periplasm_
reversible: false
fast: false
product: 776392
product: 776404
kinetic law: 776428
reactant: 776366
reactant: 776353

776340
type: SpeciesReference
stoichiometry: 1.0
species: 241883

776416
type: SpeciesReference
stoichiometry: 1.0
species: 258902

776379
type: SpeciesReference
stoichiometry: 1.0
species: 239803

776392
type: SpeciesReference
stoichiometry: 1.0
species: 243903

243903
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_crotonobetaine_C7H13NO2

776404
type: SpeciesReference
stoichiometry: 1.0
species: 251342

776489
type: LocalParameter
value: -0.003009

776477
type: LocalParameter
units: 716537
value: 0.0

776465
type: LocalParameter
value: 0.0

776453
type: LocalParameter
units: 716537
value: 999999.0

776440
type: LocalParameter
units: 716537
value: 0.0

776366
type: SpeciesReference
stoichiometry: 1.0
species: 243923

243923
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_crotonobetaine_C7H13NO2

776353
type: SpeciesReference
stoichiometry: 1.0
species: 251222

297878
type: Reaction
kinetic law: 886672
product: 886660
reactant: 886648
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_isoleucine_transport_via_diffusion__extracellular_to_periplasm_

886732
type: LocalParameter
value: 0.0

886720
type: LocalParameter
units: 716537
value: 0.0

886708
type: LocalParameter
value: 0.0

886696
type: LocalParameter
units: 716537
value: 999999.0

886684
type: LocalParameter
units: 716537
value: -999999.0

886660
type: SpeciesReference
stoichiometry: 1.0
species: 252482

252482
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_L_Isoleucine_C6H13NO2

886648
type: SpeciesReference
stoichiometry: 1.0
species: 252462

252462
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Isoleucine_C6H13NO2

239023
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_N_Acetyl_D_glucosamine_1_phosphate_C8H14NO9P

281399
type: Reaction
reactant: 787998
product: 788034
product: 788022
product: 788046
reversible: false
notes: GENE_ASSOCIATION: b2541 PROTEIN_ASSOCIATION: HcaB SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
fast: false
kinetic law: 788058
reactant: 788010
name: R_2_3_dihydroxycinnamate_dehydrogenase

787998
type: SpeciesReference
stoichiometry: 1.0
species: 242743

242743
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_cis_3__3_carboxyethenyl__3_5_cyclohexadiene_1_2_diol_C9H9O4

788034
type: SpeciesReference
stoichiometry: 1.0
species: 251342

788022
type: SpeciesReference
stoichiometry: 1.0
species: 245283

245283
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_3_dihydroxicinnamic_acid_C9H7O4

788046
type: SpeciesReference
stoichiometry: 1.0
species: 255962

788118
type: LocalParameter
value: 0.0

788106
type: LocalParameter
units: 716537
value: 0.0

788094
type: LocalParameter
value: 0.0

788082
type: LocalParameter
units: 716537
value: 999999.0

788070
type: LocalParameter
units: 716537
value: 0.0

788010
type: SpeciesReference
stoichiometry: 1.0
species: 255942

268881
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Maltotriose_C18H32O16

257422
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_2_dihexadec_9_enoyl_sn_glycerol_3_phosphate_C35H63O8P1

252942
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

273720
type: Reaction
product: 737299
fast: false
name: R_N_acetylmuramate_transport_via_PEPPyr_PTS__periplasm_
kinetic law: 737323
reactant: 737287
reversible: false
reactant: 737275
product: 737311
notes: GENE_ASSOCIATION: ( b2417 and b2429 and b2415 and b2416 ) PROTEIN_ASSOCIATION: ( Crr and MurP and PtsH and PtsI ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:

737299
type: SpeciesReference
stoichiometry: 1.0
species: 239263

737383
type: LocalParameter
value: 0.0

737371
type: LocalParameter
units: 716537
value: 0.0

737359
type: LocalParameter
value: 0.0

737347
type: LocalParameter
units: 716537
value: 999999.0

737335
type: LocalParameter
units: 716537
value: 0.0

737287
type: SpeciesReference
stoichiometry: 1.0
species: 239303

239303
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_N_Acetylmuramate_C11H18NO8

737275
type: SpeciesReference
stoichiometry: 1.0
species: 258062

737311
type: SpeciesReference
stoichiometry: 1.0
species: 259721

235534
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Dehydro_3_deoxy_D_galactonate_C6H9O6

294178
type: Reaction
fast: false
product: 863732
kinetic law: 863756
product: 863720
product: 863708
reactant: 863684
reversible: true
notes: GENE_ASSOCIATION: b1761 PROTEIN_ASSOCIATION: GdhA SUBSYSTEM: S_Glutamate_Metabolism PROTEIN_CLASS: 1.4.1.4
reactant: 863696
product: 863744
reactant: 863672
name: R_glutamate_dehydrogenase__NADP_

863732
type: SpeciesReference
stoichiometry: 1.0
species: 256002

863817
type: LocalParameter
value: 0.0

863805
type: LocalParameter
units: 716537
value: -6.29032

863793
type: LocalParameter
value: 0.0

863781
type: LocalParameter
units: 716537
value: 999999.0

863768
type: LocalParameter
units: 716537
value: -999999.0

863720
type: SpeciesReference
stoichiometry: 1.0
species: 251342

863708
type: SpeciesReference
stoichiometry: 1.0
species: 240103

863684
type: SpeciesReference
stoichiometry: 1.0
species: 251222

863696
type: SpeciesReference
stoichiometry: 1.0
species: 255982

863744
type: SpeciesReference
stoichiometry: 1.0
species: 256042

863672
type: SpeciesReference
stoichiometry: 1.0
species: 249962

255062
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_S_Methyl_L_methionine_C6H14NO2S

273820
type: Reaction
name: R_acyl_CoA_dehydrogenase__butanoyl_CoA_
fast: false
reversible: true
reactant: 737830
notes: GENE_ASSOCIATION: b0221 PROTEIN_ASSOCIATION: FadE SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.3.99.2
product: 737843
kinetic law: 737867
reactant: 737818
product: 737855

737830
type: SpeciesReference
stoichiometry: 1.0
species: 247043

737843
type: SpeciesReference
stoichiometry: 1.0
species: 241903

737927
type: LocalParameter
value: 0.0

737915
type: LocalParameter
units: 716537
value: 0.0

737903
type: LocalParameter
value: 0.0

737891
type: LocalParameter
units: 716537
value: 999999.0

737879
type: LocalParameter
units: 716537
value: -999999.0

737818
type: SpeciesReference
stoichiometry: 1.0
species: 242003

242003
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Butanoyl_CoA_C25H38N7O17P3S

737855
type: SpeciesReference
stoichiometry: 1.0
species: 247063

305237
type: Reaction
notes: GENE_ASSOCIATION: b1278 PROTEIN_ASSOCIATION: PgpB SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.3.4
reactant: 941142
name: R_Phosphatidate_phosphatase__periplasmic__n_C120_
fast: false
kinetic law: 941190
product: 941166
reversible: false
reactant: 941154
product: 941178

941142
type: SpeciesReference
stoichiometry: 1.0
species: 251262

941250
type: LocalParameter
value: 0.0

941238
type: LocalParameter
units: 716537
value: 0.0

941226
type: LocalParameter
value: 0.0

941214
type: LocalParameter
units: 716537
value: 999999.0

941202
type: LocalParameter
units: 716537
value: 0.0

941166
type: SpeciesReference
stoichiometry: 1.0
species: 233114

233114
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_1_2_Diacyl_sn_glycerol__didodecanoyl__n_C120__C27H52O5

941154
type: SpeciesReference
stoichiometry: 1.0
species: 257282

257282
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_1_2_didodecanoyl_sn_glycerol_3_phosphate_C27H51O8P1

941178
type: SpeciesReference
stoichiometry: 1.0
species: 258942

286219
type: Reaction
kinetic law: 814615
product: 814603
reactant: 814591
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_ferroxamine_minus_Fe_3__exchange

814676
type: LocalParameter
value: 0.0

814664
type: LocalParameter
units: 716537
value: 0.0

814651
type: LocalParameter
value: 0.0

814639
type: LocalParameter
units: 716537
value: 999999.0

814627
type: LocalParameter
units: 716537
value: 0.0

814603
type: SpeciesReference
stoichiometry: 1.0
species: 267201

267201
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_ferroxamine_minus_Fe_3__C25H46N6O8

814591
type: SpeciesReference
stoichiometry: 1.0
species: 247803

247803
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_ferroxamine_minus_Fe_3__C25H46N6O8

314177
type: Reaction
kinetic law: 004679
product: 004667
reactant: 004655
notes: GENE_ASSOCIATION: b3040 PROTEIN_ASSOCIATION: ZupT SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_zinc_transport_in_via_permease__no_H_

004739
type: LocalParameter
value: 0.0

004727
type: LocalParameter
units: 716537
value: 0.002327

004715
type: LocalParameter
value: 0.0

004703
type: LocalParameter
units: 716537
value: 999999.0

004691
type: LocalParameter
units: 716537
value: 0.0

004667
type: SpeciesReference
stoichiometry: 1.0
species: 264741

264741
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Zinc_Zn

004655
type: SpeciesReference
stoichiometry: 1.0
species: 264781

264781
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Zinc_Zn

264721
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_L_Xylulose_C5H10O5

261621
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Thiamin_C12H17N4OS

238923
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_N_Acetyl_D_galactosamine_1_phosphate_C8H14NO9P

253762
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_L_Lyxose_C5H10O5

275280
type: Reaction
product: 746624
fast: false
reactant: 746600
name: R_silver_transport_out_via_proton_antiport
reactant: 746588
reversible: false
product: 746612
notes: GENE_ASSOCIATION: ( b0572 and b0573 and b0574 and b0575 ) PROTEIN_ASSOCIATION: CusCFBA SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
kinetic law: 746636

746624
type: SpeciesReference
stoichiometry: 1.0
species: 239923

239923
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_silver_Ag

746600
type: SpeciesReference
stoichiometry: 1.0
species: 251362

251362
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_H_H

746588
type: SpeciesReference
stoichiometry: 1.0
species: 239903

239903
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_silver_Ag

746612
type: SpeciesReference
stoichiometry: 1.0
species: 251342

746697
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value: -0.001003

746685
type: LocalParameter
units: 716537
value: 0.0

746672
type: LocalParameter
value: 0.0

746660
type: LocalParameter
units: 716537
value: 999999.0

746648
type: LocalParameter
units: 716537
value: 0.0

267801
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Glucuronate_C6H9O7

285479
type: Reaction
kinetic law: 811031
product: 811019
reactant: 811007
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Cysteine_exchange

811091
type: LocalParameter
value: -0.089274

811079
type: LocalParameter
units: 716537
value: 0.0

811067
type: LocalParameter
value: 0.0

811055
type: LocalParameter
units: 716537
value: 999999.0

811043
type: LocalParameter
units: 716537
value: 0.0

811019
type: SpeciesReference
stoichiometry: 1.0
species: 266461

266461
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Cysteine_C3H7NO2S

811007
type: SpeciesReference
stoichiometry: 1.0
species: 244263

244263
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Cysteine_C3H7NO2S

313636
type: Reaction
kinetic law: 998110
fast: false
product: 998086
product: 998073
product: 998098
reversible: false
reactant: 998049
name: R_UDP_L_Ara4N_formyltransferase
reactant: 998061
notes: GENE_ASSOCIATION: b2255 PROTEIN_ASSOCIATION: ArnA SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:

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302517
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kinetic law: 917963
name: R_3_deoxy_D_manno_octulosonic_acid_transferase
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notes: GENE_ASSOCIATION: b3633 PROTEIN_ASSOCIATION: WaaA SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
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reactant: 917903
product: 917951
reactant: 917915
product: 917939
reversible: false

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value: 0.014329

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species: 243003

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boundary condition: false
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initial amount: NaN
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boundary condition: false
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243103
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initial concentration: NaN
initial amount: NaN
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name: M_cardiolipin__tetratetradecanoyl__n_C140__C65H124O17P2

292078
type: Reaction
kinetic law: 850300
product: 850288
reactant: 850276
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_D_glucose_1_phosphate_transport_via_diffusion

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species: 248362

248362
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_D_Glucose_1_phosphate_C6H11O9P

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272260
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reactant: 728079
product: 728128
fast: false
reversible: false
kinetic law: 728140
notes: GENE_ASSOCIATION: ( b2323 or b1095 ) PROTEIN_ASSOCIATION: ( FabB ) or ( FabF ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 2.3.1.41
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reactant: 728091
reactant: 728067
product: 728115
product: 728103

728079
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species: 253782

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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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728128
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species: 243283

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value: 0.262148

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728115
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species: 238303

728103
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stoichiometry: 1.0
species: 237364

273060
type: Reaction
notes: GENE_ASSOCIATION: ( b2662 or b1302 ) PROTEIN_ASSOCIATION: ( GabT ) or ( PuuE ) SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 2.6.1.19
reactant: 733342
product: 733378
reversible: false
reactant: 733354
name: R_4_aminobutyrate_transaminase
fast: false
kinetic law: 733390
product: 733366

733342
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stoichiometry: 1.0
species: 237664

237664
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_4_Aminobutanoate_C4H9NO2

733378
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stoichiometry: 1.0
species: 261041

261041
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Succinic_semialdehyde_C4H5O3

733354
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stoichiometry: 1.0
species: 240103

733450
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value: 0.0

733438
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value: 0.0

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units: 716537
value: 0.0

733366
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stoichiometry: 1.0
species: 249962

303257
type: Reaction
name: R_nicotinate_nucleotide_diphosphorylase__carboxylating_
kinetic law: 926363
reactant: 926314
product: 926339
reactant: 926302
reactant: 926290
product: 926327
notes: GENE_ASSOCIATION: b0109 PROTEIN_ASSOCIATION: NadCec SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.4.2.19
reversible: false
product: 926351
fast: false

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units: 716537
value: 0.001678

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value: 999999.0

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units: 716537
value: 0.0

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stoichiometry: 1.0
species: 259801

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Quinolinate_C7H3NO4

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species: 256162

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stoichiometry: 1.0
species: 259402

926290
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species: 251342

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species: 243283

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species: 259141

268481
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boundary condition: true
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initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_IMP_C10H11N4O8P

309257
type: Reaction
notes: GENE_ASSOCIATION: b2585 PROTEIN_ASSOCIATION: PssA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 2.7.8.8
reversible: false
name: R_Phosphatidylserine_syntase__n_C180_
product: 967304
reactant: 967267
kinetic law: 967329
product: 967291
product: 967317
reactant: 967279
fast: false

967304
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species: 251342

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species: 242663

242663
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initial concentration: NaN
initial amount: NaN
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967395
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967382
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value: 0.0

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967355
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value: 999999.0

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species: 259481

259481
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initial amount: NaN
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species: 260321

236154
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Glycerate_2_phosphate_C3H4O7P

283499
type: Reaction
kinetic law: 801098
product: 801086
product: 801074
reactant: 801062
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) PROTEIN_ASSOCIATION: ( FadB ) or ( FadJ ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 4.2.1.17
fast: false
reversible: true
name: R_3_hydroxyacyl_CoA_dehydratase__3_hydroxyoctadecanoyl_CoA_

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units: 716537
value: 0.0

801134
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value: 0.0

801122
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units: 716537
value: 999999.0

801110
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units: 716537
value: -999999.0

801086
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stoichiometry: 1.0
species: 257002

257002
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

801074
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stoichiometry: 1.0
species: 251222

801062
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stoichiometry: 1.0
species: 237034

237034
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

234734
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Acyl_sn_glycero_3_phosphoethanolamine__n_C120__C17H36NO7P1

277720
type: Reaction
notes: GENE_ASSOCIATION: b1539 PROTEIN_ASSOCIATION: YdfG SUBSYSTEM: S_Threonine_and_Lysine_Metabolism PROTEIN_CLASS:
fast: false
product: 762024
name: R_L_allo_threonine_dehydrogenase
kinetic law: 762060
reversible: true
reactant: 762000
reactant: 762012
product: 762036
product: 762048

762024
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stoichiometry: 1.0
species: 235334

235334
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_2_Amino_3_oxobutanoate_C4H7NO3

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value: 0.0

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units: 716537
value: 0.0

762096
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value: 0.0

762084
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units: 716537
value: 999999.0

762072
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units: 716537
value: -999999.0

762000
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stoichiometry: 1.0
species: 241863

241863
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_L_Allo_threonine_C4H9NO3

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species: 255982

762036
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species: 251342

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species: 256002

252922
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_potassium_K

291159
type: Reaction
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
product: 841893
name: R_Fe_III_hydroxamate_unloaded_secretion__extracellular_
reactant: 841869
kinetic law: 841905
reversible: false
fast: false
product: 841881
reactant: 841857

841893
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stoichiometry: 1.0
species: 247503

247503
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Fe_III_hydoxamate__unloaded_C9H18O6N3

841869
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species: 251382

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value: 0.0

841941
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841929
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units: 716537
value: 999999.0

841917
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units: 716537
value: 0.0

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species: 251342

841857
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species: 247523

247523
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Fe_III_hydoxamate__unloaded_C9H18O6N3

251302
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Hydrogen_sulfide_H2S

271680
type: Reaction
kinetic law: 724480
product: 724468
product: 724456
reactant: 724443
notes: GENE_ASSOCIATION: ( b0180 or b0954 ) PROTEIN_ASSOCIATION: ( FabZ ) or ( FabA ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 4.2.1.61
fast: false
reversible: false
name: R_3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C121_

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value: 0.0

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units: 716537
value: 0.110815

724516
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value: 0.0

724504
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value: 999999.0

724492
type: LocalParameter
units: 716537
value: 0.0

724468
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stoichiometry: 1.0
species: 261141

261141
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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724456
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stoichiometry: 1.0
species: 251222

724443
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stoichiometry: 1.0
species: 236674

275380
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name: R_2_Oxogluterate_dehydrogenase
product: 747241
product: 747253
reactant: 747217
fast: false
reactant: 747229
reversible: false
reactant: 747204
product: 747265
notes: GENE_ASSOCIATION: ( b0116 and b0726 and b0727 ) PROTEIN_ASSOCIATION: ( LpdA and SucAec and SucBec ) SUBSYSTEM: S_Citric_Acid_Cycle PROTEIN_CLASS:
kinetic law: 747277

747241
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stoichiometry: 1.0
species: 243283

747253
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species: 255962

747217
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species: 243343

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species: 255942

747204
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species: 240103

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stoichiometry: 1.0
species: 260901

260901
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Succinyl_CoA_C25H35N7O19P3S

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value: 0.0

747329
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units: 716537
value: 3.728626

747316
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747303
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value: 999999.0

747290
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units: 716537
value: 0.0

241923
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constant: false
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302937
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product: 923283
fast: false
reversible: true
product: 923271
name: R_nucleoside_diphosphate_kinase__ATPGDP_
notes: GENE_ASSOCIATION: ( b0474 or b2518 ) PROTEIN_ASSOCIATION: ( Adk ) or ( Ndk ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 2.7.4.6
reactant: 923259
reactant: 923247
kinetic law: 923295

923283
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species: 250942

250942
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_GTP_C10H12N5O14P3

923271
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stoichiometry: 1.0
species: 239803

923259
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species: 249262

249262
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_GDP_C10H12N5O11P2

923247
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species: 241883

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923343
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value: 0.560428

923331
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value: 999999.0

923307
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value: -999999.0

241143
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boundary condition: false
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initial amount: NaN
in compartment: 233054
name: M_acyl_phosphatidylglycerol__n_C181__C60H110O11P

309317
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fast: false
product: 967700
kinetic law: 967712
product: 967688
name: R_phosphotransacetylase
reactant: 967675
reactant: 967663
notes: GENE_ASSOCIATION: ( b2297 or b2458 ) PROTEIN_ASSOCIATION: ( Pta ) or ( EutD ) SUBSYSTEM: S_Pyruvate_Metabolism PROTEIN_CLASS: 2.3.1.8
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967700
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species: 243343

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967760
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units: 716537
value: -0.428025

967748
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value: 999999.0

967724
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value: -999999.0

967688
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species: 239563

239563
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Acetyl_phosphate_C2H3O5P

967675
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species: 258902

967663
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species: 238823

279260
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kinetic law: 771714
product: 771701
reactant: 771689
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_CMP_transport_via_diffusion__extracellular_to_periplasm_

771778
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771765
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value: 0.0

771753
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771740
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771727
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value: -999999.0

771701
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species: 243263

243263
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771689
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species: 243243

311077
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reactant: 978647
reversible: true
reactant: 978671
product: 978696
product: 978683
notes: GENE_ASSOCIATION: ( b1692 or b3281 ) PROTEIN_ASSOCIATION: ( YdiB ) or ( AroEec ) SUBSYSTEM: S_Tyrosine__Tryptophan__and_Phenylalanine_Metabolism PROTEIN_CLASS: 1.1.1.25
kinetic law: 978709
reactant: 978659
fast: false

978647
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species: 236574

236574
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_3_Dehydroshikimate_C7H7O5

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species: 256002

978696
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species: 260461

260461
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Shikimate_C7H9O5

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species: 255982

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978758
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value: 0.273872

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units: 716537
value: -999999.0

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stoichiometry: 1.0
species: 251342

267281
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Fructuronate_C6H9O7

247163
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_fuculose_C6H12O5

234194
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_1_tetradecanoyl_sn_glycerol_3_phosphate_C17H33O7P1

300898
type: Reaction
kinetic law: 905819
product: 905807
reactant: 905795
notes: GENE_ASSOCIATION: b4036 PROTEIN_ASSOCIATION: LamB SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
fast: false
reversible: false
name: R_Maltotriose_transport_via_diffusion__extracellular_to_periplasm__irreversible

905879
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value: 0.0

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units: 716537
value: 0.0

905855
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value: 0.0

905843
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units: 716537
value: 999999.0

905831
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units: 716537
value: 0.0

905807
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stoichiometry: 1.0
species: 254202

254202
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Maltotriose_C18H32O16

905795
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stoichiometry: 1.0
species: 254182

254182
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Maltotriose_C18H32O16

273160
type: Reaction
kinetic law: 733988
product: 733976
product: 733964
reactant: 733952
notes: GENE_ASSOCIATION: b2224 PROTEIN_ASSOCIATION: AtoB SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.9
fast: false
reversible: true
name: R_acetyl_CoA_C_acetyltransferase

734048
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value: 0.0

734036
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units: 716537
value: 0.0

734024
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value: 0.0

734012
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units: 716537
value: 999999.0

734000
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units: 716537
value: -999999.0

733976
type: SpeciesReference
stoichiometry: 1.0
species: 243343

733964
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stoichiometry: 1.0
species: 238563

238563
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Acetoacetyl_CoA_C25H36N7O18P3S

733952
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stoichiometry: 2.0
species: 238823

269081
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_magnesium_Mg

242205
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_butanesulfonate_C4H9O3S

271500
type: Reaction
name: R_2_dehydro_L_gulonate_reductase__NADH_
fast: false
reactant: 723436
reactant: 723460
reversible: false
product: 723484
notes: GENE_ASSOCIATION: b3553 PROTEIN_ASSOCIATION: YiaE SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
reactant: 723448
kinetic law: 723496
product: 723472

723436
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stoichiometry: 1.0
species: 235574

235574
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Dehydro_L_gulonate_C6H9O7

723460
type: SpeciesReference
stoichiometry: 1.0
species: 255962

723484
type: SpeciesReference
stoichiometry: 1.0
species: 255942

723448
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stoichiometry: 1.0
species: 251342

723556
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value: 0.0

723544
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units: 716537
value: 0.0

723532
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value: 0.0

723520
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units: 716537
value: 999999.0

723508
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units: 716537
value: 0.0

723472
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stoichiometry: 1.0
species: 252362

252362
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Idonate_C6H11O7

257822
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_phosphatidylethanolamine__ditetradec_7_enoyl__n_C141__C33H62N1O8P1

313796
type: Reaction
kinetic law: 000051
product: 000039
reactant: 000027
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_uracil_transport_via_diffusion__extracellular_to_periplasm_

000111
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value: 0.0

000099
type: LocalParameter
units: 716537
value: 0.0

000087
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value: 0.0

000075
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units: 716537
value: 999999.0

000063
type: LocalParameter
units: 716537
value: -999999.0

000039
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stoichiometry: 1.0
species: 264061

264061
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Uracil_C4H4N2O2

000027
type: SpeciesReference
stoichiometry: 1.0
species: 264041

264041
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Uracil_C4H4N2O2

278400
type: Reaction
kinetic law: 766483
product: 766471
reactant: 766459
notes: GENE_ASSOCIATION: b3040 PROTEIN_ASSOCIATION: ZupT SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_cadmium__2__transport_in_via_permease__no_H_

766543
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value: 0.0

766531
type: LocalParameter
units: 716537
value: 0.0

766519
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value: 0.0

766507
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units: 716537
value: 999999.0

766495
type: LocalParameter
units: 716537
value: 0.0

766471
type: SpeciesReference
stoichiometry: 1.0
species: 242463

766459
type: SpeciesReference
stoichiometry: 1.0
species: 242503

272580
type: Reaction
notes: GENE_ASSOCIATION: b0004 PROTEIN_ASSOCIATION: ThrC SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
kinetic law: 730309
reactant: 730273
product: 730297
reversible: false
product: 730285
reactant: 730261
fast: false
name: R_4_Hydroxy_L_threonine_synthase

730369
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value: -0.063194

730357
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units: 716537
value: 0.0

730345
type: LocalParameter
value: 0.0

730333
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units: 716537
value: 999999.0

730321
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units: 716537
value: 0.0

730273
type: SpeciesReference
stoichiometry: 1.0
species: 258882

258882
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_O_Phospho_4_hydroxy_L_threonine_C4H8NO7P

730297
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stoichiometry: 1.0
species: 258902

730285
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stoichiometry: 1.0
species: 237843

237843
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_4_Hydroxy_L_threonine_C4H9NO4

730261
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stoichiometry: 1.0
species: 251222

261081
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_sulfoacetate_C2H2O5S

308677
type: Reaction
kinetic law: 963725
product: 963712
reactant: 963700
notes: GENE_ASSOCIATION: b2024 PROTEIN_ASSOCIATION: HisA SUBSYSTEM: S_Histidine_Metabolism PROTEIN_CLASS: 5.3.1.16
fast: false
reversible: true
name: R_1__5_phosphoribosyl__5__5_phosphoribosylamino_methylideneamino_imidazole_4_carboxamide_isomerase

963785
type: LocalParameter
value: 0.0

963773
type: LocalParameter
units: 716537
value: 0.069795

963761
type: LocalParameter
value: 0.0

963749
type: LocalParameter
units: 716537
value: 999999.0

963737
type: LocalParameter
units: 716537
value: -999999.0

963712
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stoichiometry: 1.0
species: 259302

259302
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

963700
type: SpeciesReference
stoichiometry: 1.0
species: 259301

259301
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

260402
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Seryl_tRNA_Sec__C3H6NO2R

269901
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Sulfite_O3S

287359
type: Reaction
kinetic law: 820130
product: 820118
reactant: 820106
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Histidine_exchange

820190
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value: -0.106828

820178
type: LocalParameter
units: 716537
value: 0.0

820166
type: LocalParameter
value: 0.0

820154
type: LocalParameter
units: 716537
value: 999999.0

820142
type: LocalParameter
units: 716537
value: 0.0

820118
type: SpeciesReference
stoichiometry: 1.0
species: 268341

268341
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Histidine_C6H9N3O2

820106
type: SpeciesReference
stoichiometry: 1.0
species: 251782

251782
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Histidine_C6H9N3O2

285499
type: Reaction
kinetic law: 811127
product: 811115
reactant: 811103
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Cytidine_exchange

811188
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value: -0.147453

811176
type: LocalParameter
units: 716537
value: 0.0

811164
type: LocalParameter
value: 0.0

811151
type: LocalParameter
units: 716537
value: 999999.0

811139
type: LocalParameter
units: 716537
value: 0.0

811115
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stoichiometry: 1.0
species: 266481

266481
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Cytidine_C9H13N3O5

811103
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stoichiometry: 1.0
species: 244363

244363
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Cytidine_C9H13N3O5

273400
type: Reaction
kinetic law: 735415
product: 735403
reactant: 735391
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_N_acetyl_D_galactosamine_transport_via_diffusion__extracellular_to_periplasm_

735475
type: LocalParameter
value: 0.0

735463
type: LocalParameter
units: 716537
value: 0.0

735451
type: LocalParameter
value: 0.0

735439
type: LocalParameter
units: 716537
value: 999999.0

735427
type: LocalParameter
units: 716537
value: -999999.0

735403
type: SpeciesReference
stoichiometry: 1.0
species: 238963

238963
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_N_Acetyl_D_galactosamine_C8H15NO6

735391
type: SpeciesReference
stoichiometry: 1.0
species: 238943

238943
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_N_Acetyl_D_galactosamine_C8H15NO6

269601
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Phenethylamine_C8H12N

237134
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

303778
type: Reaction
notes: GENE_ASSOCIATION: ( b0480 or b4055 ) PROTEIN_ASSOCIATION: ( UshA ) or ( AphA ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.3.5
reactant: 930595
reversible: false
product: 930619
fast: false
kinetic law: 930631
name: R_5__nucleotidase__dGMP_
reactant: 930583
product: 930607

930595
type: SpeciesReference
stoichiometry: 1.0
species: 251262

930619
type: SpeciesReference
stoichiometry: 1.0
species: 258942

930691
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value: 0.0

930679
type: LocalParameter
units: 716537
value: 0.0

930667
type: LocalParameter
value: 0.0

930655
type: LocalParameter
units: 716537
value: 999999.0

930643
type: LocalParameter
units: 716537
value: 0.0

930583
type: SpeciesReference
stoichiometry: 1.0
species: 245103

245103
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_dGMP_C10H12N5O7P

930607
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stoichiometry: 1.0
species: 245163

245163
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Deoxyguanosine_C10H13N5O4

299998
type: Reaction
product: 900145
reversible: false
reactant: 900109
name: R_Lysophospholipase_L2__acyltransferase__2_acyl_glycerophosphoglycerol__n_C141_
notes: GENE_ASSOCIATION: b3825 PROTEIN_ASSOCIATION: PldB SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS:
kinetic law: 900157
product: 900133
reactant: 900121
fast: false

900145
type: SpeciesReference
stoichiometry: 1.0
species: 248443

900109
type: SpeciesReference
stoichiometry: 1.0
species: 235094

235094
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Acyl_sn_glycero_3_phosphoglycerol__n_C141__C20H38O9P1

900218
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value: -1.073795

900206
type: LocalParameter
units: 716537
value: 0.0

900194
type: LocalParameter
value: 0.0

900182
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units: 716537
value: 999999.0

900169
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units: 716537
value: 0.0

900133
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stoichiometry: 1.0
species: 241063

241063
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_acyl_phosphatidylglycerol__n_C141__C48H86O11P

900121
type: SpeciesReference
stoichiometry: 1.0
species: 258162

293098
type: Reaction
fast: false
product: 856451
reactant: 856439
reactant: 856415
reactant: 856427
product: 856463
kinetic law: 856475
reversible: false
notes: GENE_ASSOCIATION: b1236 PROTEIN_ASSOCIATION: GalUec SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 2.7.7.9
name: R_UTP_glucose_1_phosphate_uridylyltransferase__irreversible_

856451
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stoichiometry: 1.0
species: 259141

856439
type: SpeciesReference
stoichiometry: 1.0
species: 264241

264241
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_UTP_C9H11N2O15P3

856415
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stoichiometry: 1.0
species: 248323

248323
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Glucose_1_phosphate_C6H11O9P

856427
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stoichiometry: 1.0
species: 251342

856463
type: SpeciesReference
stoichiometry: 1.0
species: 263601

856536
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value: 0.0

856524
type: LocalParameter
units: 716537
value: 0.0

856512
type: LocalParameter
value: 0.0

856499
type: LocalParameter
units: 716537
value: 999999.0

856487
type: LocalParameter
units: 716537
value: 0.0

256682
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Oxaloacetate_C4H2O5

283839
type: Reaction
product: 803076
reversible: true
reactant: 803051
fast: false
product: 803063
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
kinetic law: 803088
name: R_ethanol_reversible_transport_via_proton_symport__periplasm_
reactant: 803039

803076
type: SpeciesReference
stoichiometry: 1.0
species: 251342

803051
type: SpeciesReference
stoichiometry: 1.0
species: 251382

803063
type: SpeciesReference
stoichiometry: 1.0
species: 246903

803148
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803136
type: LocalParameter
units: 716537
value: 0.0

803124
type: LocalParameter
value: 0.0

803112
type: LocalParameter
units: 716537
value: 999999.0

803100
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units: 716537
value: -999999.0

803039
type: SpeciesReference
stoichiometry: 1.0
species: 246943

246943
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Ethanol_C2H6O

265301
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Aminoacetaldehyde_C2H6NO

275120
type: Reaction
kinetic law: 745647
reactant: 745599
reversible: false
name: R_1_tetradecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C120_
reactant: 745611
product: 745635
product: 745623
notes: GENE_ASSOCIATION: b3018 PROTEIN_ASSOCIATION: PlsC SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 2.3.1.51
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745707
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745695
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value: 0.0

745683
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745671
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745659
type: LocalParameter
units: 716537
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745599
type: SpeciesReference
stoichiometry: 1.0
species: 233914

233914
type: Species
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_dodecanoyl_sn_glycerol_3_phosphate_C15H29O7P1

745611
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species: 244943

745635
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stoichiometry: 1.0
species: 257262

257262
type: Species
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_2_didodecanoyl_sn_glycerol_3_phosphate_C27H51O8P1

745623
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species: 238303

298698
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name: R_potassium_transport_out_via_proton_antiport__periplasm_
reversible: false
product: 891811
reactant: 891774
notes: GENE_ASSOCIATION: ( b3350 or b0047 or b1216 or b0842 ) PROTEIN_ASSOCIATION: ( KefB ) or ( KefC ) or ( ChaA ) or ( MdfA ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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kinetic law: 891823
product: 891799
reactant: 891787

891811
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species: 252922

891774
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stoichiometry: 1.0
species: 252882

252882
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_potassium_K

891884
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value: -0.002006

891872
type: LocalParameter
units: 716537
value: 0.0

891860
type: LocalParameter
value: 0.0

891848
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units: 716537
value: 999999.0

891835
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units: 716537
value: 0.0

891799
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stoichiometry: 1.0
species: 251342

891787
type: SpeciesReference
stoichiometry: 1.0
species: 251382

280700
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kinetic law: 781888
product: 781876
reactant: 781864
notes: GENE_ASSOCIATION: b0411 PROTEIN_ASSOCIATION: Tsx SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
fast: false
reversible: true
name: R_deoxyadenosine_transport_via_diffusion__extracellular_to_periplasm_

781948
type: LocalParameter
value: 0.0

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species: 244443

244443
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Deoxyadenosine_C10H13N5O3

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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Deoxyadenosine_C10H13N5O3

272520
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kinetic law: 729948
product: 729936
reactant: 729924
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
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730008
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729996
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units: 716537
value: 0.0

729984
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729972
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729960
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units: 716537
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729936
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stoichiometry: 1.0
species: 237644

237644
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_3__UMP_C9H11N2O9P

729924
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species: 237643

237643
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_3__UMP_C9H11N2O9P

309357
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kinetic law: 967966
product: 967954
reversible: false
reactant: 967918
notes: GENE_ASSOCIATION: b3634 PROTEIN_ASSOCIATION: CoaD SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.7.7.3
fast: false
reactant: 967906
product: 967942
reactant: 967930
name: R_pantetheine_phosphate_adenylyltransferase

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units: 716537
value: 4.24E-4

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units: 716537
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245903
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Dephospho_CoA_C21H33N7O13P2S

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species: 257642

257642
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initial concentration: NaN
initial amount: NaN
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name: M_Pantetheine_4__phosphate_C11H21N2O7PS

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initial concentration: NaN
initial amount: NaN
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_magnesium_Mg

290279
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reactant: 835661
reversible: false
product: 835685
reactant: 835673
fast: false
notes: GENE_ASSOCIATION: b0452 PROTEIN_ASSOCIATION: TesB SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS:
kinetic law: 835722
product: 835710
product: 835698

835661
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species: 251222

835685
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stoichiometry: 1.0
species: 243343

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species: 256742

835782
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units: 716537
value: 0.0

835758
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units: 716537
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835734
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units: 716537
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835710
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835698
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293038
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kinetic law: 856126
product: 856114
reactant: 856102
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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856174
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value: 999999.0

856138
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species: 248942

248942
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Galactitol_C6H14O6

856102
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species: 248922

291818
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fast: false
product: 848340
reversible: false
kinetic law: 848352
name: R_Fructoselysine_transport_via_proton_symport__periplasm_
reactant: 848316
notes: GENE_ASSOCIATION: b3370 PROTEIN_ASSOCIATION: FrlA SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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reactant: 848304

848340
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species: 251342

848412
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848400
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value: 0.0

848388
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848376
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848364
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units: 716537
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848316
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848328
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species: 248143

248143
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initial concentration: NaN
initial amount: NaN
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name: M_fructoselysine_C12H25N2O7

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species: 248183

248183
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_fructoselysine_C12H25N2O7

300138
type: Reaction
notes: GENE_ASSOCIATION: b3825 PROTEIN_ASSOCIATION: PldB SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.5
reactant: 900992
reversible: false
name: R_Lysophospholipase_L2__2_acylglycerophosphoethanolamine__n_C141_
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product: 901004
product: 901016
kinetic law: 901040
reactant: 900980
product: 901028

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species: 251222

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species: 248403

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species: 251342

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species: 234814

234814
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initial concentration: NaN
initial amount: NaN
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name: M_2_Acyl_sn_glycero_3_phosphoethanolamine__n_C141__C19H38NO7P1

901028
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species: 262801

262801
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_tetradecenoate__n_C141__C14H25O2

251702
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Hg2_Hg

312017
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name: R_dTDP_4_amino_4_6_dideoxy_D_glucose_transaminase
notes: GENE_ASSOCIATION: b3791 PROTEIN_ASSOCIATION: WecE SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 2.6.1.33
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reactant: 984400
fast: false
kinetic law: 984449
product: 984437
product: 984424
reactant: 984412

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species: 246163

246163
type: Species
constant: false
boundary condition: false
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initial amount: NaN
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984498
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value: 999999.0

984461
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species: 246143

246143
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984424
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species: 240103

984412
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304217
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kinetic law: 934180
product: 934168
reactant: 934120
reactant: 934132
fast: false
product: 934144
name: R_O16_anitgen__x4__ligase__periplasm_
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notes: GENE_ASSOCIATION: b3622 PROTEIN_ASSOCIATION: WaaL SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
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934241
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934229
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934217
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934205
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934193
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934168
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species: 263422

263422
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Undecaprenyl_diphosphate_C55H89O7P2

934120
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species: 243463

934132
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stoichiometry: 1.0
species: 256502

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934144
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species: 251382

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stoichiometry: 1.0
species: 256482

256482
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233034

276420
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name: R_aminopeptidase__pro_gly_
kinetic law: 753740
product: 753716
fast: false
notes: GENE_ASSOCIATION: ( b2523 or b4260 or b0237 or b0932 ) PROTEIN_ASSOCIATION: ( PepB ) or ( PepA ) or ( PepD ) or ( PepN ) SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 3.4.11.2
reactant: 753692
reactant: 753704
reversible: false
product: 753728

753800
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753788
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value: 0.0

753776
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753764
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value: 999999.0

753752
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units: 716537
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stoichiometry: 1.0
species: 250082

753692
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species: 251222

753704
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species: 259361

259361
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Prolinylglycine_C7H12N2O3

753728
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stoichiometry: 1.0
species: 259322

287499
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kinetic law: 820812
product: 820799
reactant: 820786
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
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stoichiometry: 1.0
species: 268501

268501
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constant: false
boundary condition: true
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initial concentration: NaN
initial amount: NaN
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name: M_Indole_C8H7N

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species: 252622

252622
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Indole_C8H7N

299378
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product: 896145
product: 896121
reactant: 896109
name: R_Lysophospholipase_L1__2_acylglycerophosphotidate__n_C181___periplasm_
fast: false
product: 896133
reversible: false
reactant: 896097
notes: GENE_ASSOCIATION: b0494 PROTEIN_ASSOCIATION: TesA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.5
kinetic law: 896157

896145
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species: 256882

896121
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stoichiometry: 1.0
species: 250342

250342
type: Species
constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Glycerol_3_phosphate_C3H7O6P

896109
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species: 251262

896133
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896097
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species: 234054

234054
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_1_octadec_11_enoyl_sn_glycerol_3_phosphate_C21H39O7P1

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896205
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896193
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896181
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896169
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283519
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kinetic law: 801206
product: 801194
product: 801182
reactant: 801170
notes: GENE_ASSOCIATION: b1850 PROTEIN_ASSOCIATION: Eda SUBSYSTEM: S_Pentose_Phosphate_Pathway PROTEIN_CLASS: 4.1.2.14
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801254
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value: 0.0

801242
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801230
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801218
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units: 716537
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801194
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species: 259721

801182
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801170
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species: 235434

235434
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initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Dehydro_3_deoxy_D_gluconate_6_phosphate_C6H8O9P

272620
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reactant: 730502
fast: false
kinetic law: 730551
name: R_tetrapeptide_L_D_carboxypeptidase__periplasm_
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reversible: false
product: 730539
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Murein_Recycling PROTEIN_CLASS:

730502
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species: 238363

238363
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_L_alanine_D_glutamate_meso_2_6_diaminoheptanedioate_D_alanine_C18H30N5O9

730612
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730600
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value: 0.0

730588
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730576
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species: 240263

240263
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initial concentration: NaN
initial amount: NaN
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name: M_D_Alanine_C3H7NO2

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species: 238424

238424
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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initial amount: NaN
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name: M_3_Dehydro_L_gulonate_C6H9O7

270920
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product: 719895
reactant: 719883
notes: GENE_ASSOCIATION: b2835 PROTEIN_ASSOCIATION: LplT SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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719932
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719920
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719895
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stoichiometry: 1.0
species: 234774

234774
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_2_Acyl_sn_glycero_3_phosphoethanolamine__n_C140__C19H40NO7P1

719883
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species: 234794

234794
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name: M_2_Acyl_sn_glycero_3_phosphoethanolamine__n_C140__C19H40NO7P1

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initial concentration: NaN
initial amount: NaN
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305757
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reactant: 944608
product: 944620
product: 944632
kinetic law: 944668
fast: false
reactant: 944584
product: 944644
product: 944656
reversible: false
reactant: 944596
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species: 257902

257902
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_phosphatidylethanolamine__dihexadec_9enoyl__n_C161__C37H70N1O8P1

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species: 239803

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species: 251342

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944717
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value: 0.036017

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944584
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257922
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initial amount: NaN
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235834
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309957
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kinetic law: 971697
product: 971683
fast: false
product: 971670
reversible: false
reactant: 971631
notes: GENE_ASSOCIATION: b0025 PROTEIN_ASSOCIATION: RibFec SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.7.1.26
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value: 1.64E-4

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971657
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species: 239803

971644
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species: 260001

295858
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reactant: 874458
name: R_GTP_amine_hydrolysis__spontaneous_
notes: GENE_ASSOCIATION: s0001 PROTEIN_ASSOCIATION: SPONTANEOUS SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS:
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reversible: false
reactant: 874482
reactant: 874470
kinetic law: 874519
product: 874506
fast: false

874458
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874543
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_XTP_C10H11N4O15P3

282519
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kinetic law: 794941
product: 794929
reactant: 794917
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_dUMP_transport_via_diffusion__extracellular_to_periplasm_

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794989
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value: 0.0

794977
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246403
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_dUMP_C9H11N2O8P

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246383
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_dUMP_C9H11N2O8P

297398
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reactant: 883759
fast: false
name: R_hypoxanthine_phosphoribosyltransferase__Hypoxanthine_
product: 883772
kinetic law: 883796
reactant: 883747
reversible: false
notes: GENE_ASSOCIATION: ( b0238 or b0125 ) PROTEIN_ASSOCIATION: ( Gpt ) or ( Hpt ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 2.4.2.8
product: 883784

883759
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species: 259402

883772
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252542
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_IMP_C10H11N4O8P

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883844
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species: 252202

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269960
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_sulfoacetate_C2H2O5S

311177
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kinetic law: 979292
product: 979280
reactant: 979268
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_SO2_transport_via_diffusion__extracellular_to_periplasm_

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979340
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value: 0.0

979328
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979304
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species: 260582

260582
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_sulfur_dioxide_O2S

979268
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species: 260581

260581
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_sulfur_dioxide_O2S

244983
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Dodecanoate__n_C120__C12H23O2

270660
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reversible: false
product: 718553
reactant: 718528
product: 718541
reactant: 718516
kinetic law: 718565
notes: GENE_ASSOCIATION: b4213 PROTEIN_ASSOCIATION: CpdB SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.4.16
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718553
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species: 251382

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species: 237644

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species: 234354

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718603
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value: 0.0

261581
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Thiamin_C12H17N4OS

311237
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kinetic law: 979583
product: 979571
reactant: 979558
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_sulfate_transport_via_diffusion__extracellular_to_periplasm_

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979632
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value: 0.184359

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979607
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units: 716537
value: 999999.0

979595
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species: 260681

260681
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Sulfate_O4S

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species: 260661

260661
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Sulfate_O4S

298778
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reversible: false
kinetic law: 892282
reactant: 892234
name: R_b_galactosidase
product: 892258
fast: false
notes: GENE_ASSOCIATION: b2132 PROTEIN_ASSOCIATION: BglX SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 3.2.1.108
reactant: 892246
product: 892270

892342
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value: 0.0

892318
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892306
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892294
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892234
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species: 251262

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892270
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species: 249562

249562
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_D_Glucose_C6H12O6

284259
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kinetic law: 805118
product: 805106
reactant: 805094
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_4_Hydroxyphenylacetaldehyde_exchange

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value: 0.0

805155
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805143
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species: 265201

265201
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boundary condition: true
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initial amount: NaN
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805094
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species: 237823

244083
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initial amount: NaN
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258922
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initial amount: NaN
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name: M_Phosphate_HO4P

310857
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product: 977296
product: 977284
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reactant: 977260
notes: GENE_ASSOCIATION: b0893 PROTEIN_ASSOCIATION: SerS SUBSYSTEM: S_tRNA_Charging PROTEIN_CLASS: 6.1.1.11
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reactant: 977235
reactant: 977248
fast: false
reversible: false

977296
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species: 260401

260401
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_L_Seryl_tRNA_Ser__C3H6NO2R

977284
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species: 259141

977272
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977260
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species: 262501

262501
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initial concentration: NaN
initial amount: NaN
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value: 0.0

977344
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977320
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977248
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species: 260321

281659
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reactant: 789690
product: 789726
fast: false
notes: GENE_ASSOCIATION: b3177 PROTEIN_ASSOCIATION: FolP SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.15
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product: 789714
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kinetic law: 789738
reversible: false

789690
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species: 237704

237704
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constant: false
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initial concentration: NaN
initial amount: NaN
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name: M_4_Aminobenzoate_C7H6NO2

789726
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species: 259141

789702
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species: 238223

238223
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_6_hydroxymethyl_dihydropterin_pyrophosphate_C7H8N5O8P2

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species: 245443

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value: 4.93E-4

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789762
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value: 999999.0

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297818
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product: 886275
kinetic law: 886299
name: R_Isoleucyl_tRNA_synthetase
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notes: GENE_ASSOCIATION: b0026 PROTEIN_ASSOCIATION: IleS SUBSYSTEM: S_tRNA_Charging PROTEIN_CLASS: 6.1.1.5
product: 886263
reactant: 886227
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reactant: 886251
reactant: 886239
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886275
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species: 252502

252502
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_L_Isoleucyl_tRNA_Ile__C6H12NOR

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value: 0.0

886335
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886323
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262382
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species: 252442

252442
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boundary condition: false
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290619
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kinetic law: 838238
product: 838226
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reactant: 838202
notes: GENE_ASSOCIATION: ( b2097 or b1773 or b2925 ) PROTEIN_ASSOCIATION: ( FbaB ) or ( B1773 ) or ( FbaA ) SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 4.1.2.13
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name: R_fructose_bisphosphate_aldolase

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value: 5.164242

838274
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838262
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838214
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species: 245263

245263
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Dihydroxyacetone_phosphate_C3H5O6P

838202
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species: 247183

287339
type: Reaction
kinetic law: 820031
product: 820019
reactant: 820007
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
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820069
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820044
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268321
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initial concentration: NaN
initial amount: NaN
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name: M_Hg2_Hg

820007
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species: 251702

280739
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reactant: 782224
kinetic law: 782285
product: 782273
fast: false
name: R_diacylglycerol_kinase__n_C141_
reversible: false
reactant: 782237
product: 782261
notes: GENE_ASSOCIATION: b4042 PROTEIN_ASSOCIATION: DgkA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 2.7.1.107
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782224
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species: 233174

233174
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_2_Diacyl_sn_glycerol__ditetradec_7_enoyl__n_C141__C31H56O5

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782333
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782309
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782297
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782273
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species: 257342

257342
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boundary condition: false
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initial amount: NaN
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782237
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species: 241883

782261
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species: 239803

302018
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kinetic law: 912641
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notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_L_methionine_R_oxide_diffusion__extracellular_

912702
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912690
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912678
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912665
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912653
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species: 254762

254762
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_L_methionine_R_sulfoxide_C5H11NO3S

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species: 254742

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313137
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kinetic law: 992868
product: 992855
reactant: 992843
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_tyramine_transport_via_diffusion__extracellular_to_periplasm_

992929
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992916
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value: 0.0

992904
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992892
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992880
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992855
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species: 262941

262941
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initial amount: NaN
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992843
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species: 262921

262921
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initial amount: NaN
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name: M_Tyramine_C8H12NO

282279
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reactant: 793506
reactant: 793530
fast: false
product: 793542
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kinetic law: 793566
reversible: false
name: R_2_dehydropantoate_2_reductase
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793506
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793530
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793542
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793554
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793626
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793614
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value: 4.24E-4

793602
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initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Deamino_NAD_C21H24N6O15P2

313717
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kinetic law: 999229
product: 999217
notes: GENE_ASSOCIATION: b2254 PROTEIN_ASSOCIATION: ArnC SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
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name: R_undecaprenyl_phosphate_L_Ara4FN_transferase
product: 999205
fast: false
reactant: 999181
reversible: false

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units: 716537
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initial concentration: NaN
initial amount: NaN
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name: M_undecaprenyl_phosphate_4_amino_4_formyl_L_arabinose_C61H99N1O8P1

999181
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species: 263441

309017
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kinetic law: 965828
reactant: 965780
reversible: false
fast: false
reactant: 965792
product: 965816
notes: GENE_ASSOCIATION: b4160 PROTEIN_ASSOCIATION: Psd SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 4.1.1.65
product: 965804
name: R_Phosphatidylserine_decarboxylase__n_C161_

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value: 0.0

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units: 716537
value: 0.055407

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units: 716537
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units: 716537
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initial concentration: NaN
initial amount: NaN
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name: M_trans_Dec_2_enoyl_CoA_C31H48N7O17P3S

311977
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reactant: 984133
fast: false
kinetic law: 984195
notes: GENE_ASSOCIATION: b1134 PROTEIN_ASSOCIATION: YmfB SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 3.6.1.15
reactant: 984145
reversible: false
product: 984157
product: 984169
product: 984182
name: R_thiamin_pyrophosphatase

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species: 251222

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species: 261661

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Thiamine_diphosphate_C12H16N4O7P2S

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species: 251342

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species: 261641

261641
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Thiamin_monophosphate_C12H16N4O4PS

267241
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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310597
type: Reaction
notes: GENE_ASSOCIATION: ( b2751 and b2752 ) PROTEIN_ASSOCIATION: CysD SUBSYSTEM: S_Cysteine_Metabolism PROTEIN_CLASS:
product: 975636
name: R_Sulfate_adenyltransferase
reactant: 975599
product: 975648
reactant: 975611
reversible: false
reactant: 975587
kinetic law: 975672
reactant: 975575
product: 975660
product: 975624
fast: false

975636
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stoichiometry: 1.0
species: 249262

975599
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stoichiometry: 1.0
species: 251222

975648
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species: 258902

975611
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species: 260641

260641
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Sulfate_O4S

975587
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stoichiometry: 1.0
species: 250942

975732
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975720
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units: 716537
value: 0.181451

975708
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975696
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975684
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units: 716537
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species: 241183

241183
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constant: false
boundary condition: false
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295318
type: Reaction
notes: GENE_ASSOCIATION: b2239 PROTEIN_ASSOCIATION: GlpQ SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.4.46
product: 870956
name: R_Glycerophosphodiester_phosphodiesterase__Glycerophosphocholine_
kinetic law: 870980
product: 870968
product: 870944
reactant: 870932
reversible: false
reactant: 870920
fast: false

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species: 250342

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870932
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870920
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stoichiometry: 1.0
species: 248402

280800
type: Reaction
kinetic law: 783131
product: 783119
reactant: 783107
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
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783191
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783179
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783167
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783155
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783143
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783119
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stoichiometry: 1.0
species: 244543

244543
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_dAMP_C10H12N5O6P

783107
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species: 244523

244523
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_dAMP_C10H12N5O6P

242883
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_chorismate_C10H8O6

304097
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product: 932982
product: 932970
reversible: false
notes: GENE_ASSOCIATION: ( b2251 or b2781 ) PROTEIN_ASSOCIATION: ( YfaO ) or ( MazG ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS:
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reactant: 932958
name: R_Nucleoside_triphosphate_pyrophosphorylase__dttp_
kinetic law: 933006
fast: false
product: 932994

932982
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species: 251342

932970
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stoichiometry: 1.0
species: 246263

246263
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dTMP_C10H13N2O8P

932946
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stoichiometry: 1.0
species: 246323

932958
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species: 251222

933066
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933042
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933030
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933018
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units: 716537
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stoichiometry: 1.0
species: 259141

297438
type: Reaction
product: 884048
fast: false
product: 884036
reactant: 884000
reactant: 884012
name: R_Hydrogenase__menaquinone8_2_protons___periplasm_
kinetic law: 884060
reversible: false
reactant: 884024
notes: GENE_ASSOCIATION: ( ( b0972 and b0973 and b0974 ) or ( b2994 and b2997 ) ) PROTEIN_ASSOCIATION: ( HyaA ) or ( HybC ) SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS: 1.18.99.1

884048
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species: 251382

884036
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884000
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species: 251082

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884084
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884072
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units: 716537
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884024
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species: 255322

287079
type: Reaction
kinetic law: 818778
product: 818766
reactant: 818754
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Oxidized_glutathione_exchange

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818826
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818814
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818790
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species: 268061

268061
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boundary condition: true
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initial concentration: NaN
initial amount: NaN
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name: M_Oxidized_glutathione_C20H30N6O12S2

818754
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species: 250842

250842
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Oxidized_glutathione_C20H30N6O12S2

293978
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kinetic law: 862065
product: 862052
reactant: 862039
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_glucose_transport_via_diffusion__extracellular_to_periplasm_

862127
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862115
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value: 8.0

862102
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862090
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value: 999999.0

862077
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862052
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862039
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species: 249542

249542
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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261981
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Trimethylamine_N_oxide_C3H9NO

308157
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reactant: 960393
product: 960405
product: 960417
kinetic law: 960429
name: R_phosphopantothenoylcysteine_decarboxylase
notes: GENE_ASSOCIATION: b3639 PROTEIN_ASSOCIATION: Dfp SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 4.1.1.36
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reactant: 960381

960393
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960405
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species: 243283

960417
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species: 257642

960489
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960477
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value: 4.24E-4

960465
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960441
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species: 237943

263061
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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252802
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Isethionic_acid_C2H5O4S

248242
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initial concentration: NaN
initial amount: NaN
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name: M_D_Fructuronate_C6H9O7

252522
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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275960
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product: 750902
reactant: 750890
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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name: R_allantoin_transport_via_diffusion__extracellular_to_periplasm_

750975
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750962
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750938
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750926
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species: 240543

240543
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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750890
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species: 240523

240523
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initial amount: NaN
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name: M_Allantoin_C4H6N4O3

286759
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kinetic law: 817224
product: 817212
reactant: 817200
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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species: 267741

267741
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241803
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244183
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boundary condition: false
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279180
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kinetic law: 771279
product: 771267
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reactant: 771243
notes: GENE_ASSOCIATION: ( b1249 or b0789 ) PROTEIN_ASSOCIATION: ( Cls ) or ( YbhO ) SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS:
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reversible: true
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771339
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771327
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771315
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771303
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771291
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species: 243203

243203
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_cardiolipin__tetraoctadec_11_enoyl__n_C181__C81H148O17P2

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species: 258342

258342
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Phosphatidylglycerol__dioctadec_11_enoyl__n_C181__C42H78O10P1

314037
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product: 003023
product: 003010
reversible: false
kinetic law: 003035
reactant: 002997
fast: false
name: R_Xanthosine_hydrolase
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species: 264341

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species: 264501

264501
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initial concentration: NaN
initial amount: NaN
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name: M_Xanthosine_C10H12N4O6

002984
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species: 251222

312557
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kinetic law: 987698
product: 987686
reactant: 987674
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_L_threonine_transport_via_diffusion__extracellular_to_periplasm_

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987746
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species: 261721

261721
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261701
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303017
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notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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924300
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256062
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281699
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kinetic law: 789942
product: 789930
reactant: 789918
notes: GENE_ASSOCIATION: b2303 PROTEIN_ASSOCIATION: FolXec SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: true
name: R_dihydroneopterin_triphosphate_2__epimerase

790002
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value: 0.0

789990
type: LocalParameter
units: 716537
value: 0.0

789978
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value: 0.0

789966
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units: 716537
value: 999999.0

789954
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units: 716537
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stoichiometry: 1.0
species: 245323

245323
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dihydromonapterin_triphosphate_C9H12N5O13P3

789918
type: SpeciesReference
stoichiometry: 1.0
species: 240043

284279
type: Reaction
kinetic law: 805215
product: 805203
reactant: 805191
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_5_Dehydro_D_gluconate_exchange

805275
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value: -0.084259

805263
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units: 716537
value: 0.0

805251
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value: 0.0

805239
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units: 716537
value: 999999.0

805227
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units: 716537
value: 0.0

805203
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stoichiometry: 1.0
species: 265221

265221
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_5_Dehydro_D_gluconate_C6H9O7

805191
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stoichiometry: 1.0
species: 238024

238024
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_5_Dehydro_D_gluconate_C6H9O7

289039
type: Reaction
kinetic law: 828263
product: 828251
reactant: 828239
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Sulfite_exchange

828323
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value: 0.0

828311
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units: 716537
value: 0.0

828299
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value: 0.0

828287
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units: 716537
value: 999999.0

828275
type: LocalParameter
units: 716537
value: 0.0

828251
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stoichiometry: 1.0
species: 269901

828239
type: SpeciesReference
stoichiometry: 1.0
species: 260601

260601
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Sulfite_O3S

304198
type: Reaction
kinetic law: 934046
product: 934034
reactant: 934022
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
fast: false
reversible: false
name: R_O16_antigen__x4__core_oligosaccharide_lipid_A_transport__periplasm_to_extracellular_

934108
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value: 0.0

934096
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units: 716537
value: 0.0

934084
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value: 0.0

934071
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units: 716537
value: 999999.0

934059
type: LocalParameter
units: 716537
value: 0.0

934034
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stoichiometry: 1.0
species: 256462

934022
type: SpeciesReference
stoichiometry: 1.0
species: 256482

279540
type: Reaction
product: 773454
reactant: 773394
notes: GENE_ASSOCIATION: ( b0153 and b0151 and b0152 ) PROTEIN_ASSOCIATION: ( FhuB and FhuC and FhuD ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
name: R_coprogen_transport_via_ABC_system__periplasm_
product: 773430
fast: false
reactant: 773418
kinetic law: 773478
product: 773466
reactant: 773406
product: 773442
reversible: false

773454
type: SpeciesReference
stoichiometry: 1.0
species: 251342

773394
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stoichiometry: 1.0
species: 241883

773430
type: SpeciesReference
stoichiometry: 1.0
species: 239803

773418
type: SpeciesReference
stoichiometry: 1.0
species: 243603

243603
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_coprogen_C35H52N6O13Fe

773538
type: LocalParameter
value: 0.0

773526
type: LocalParameter
units: 716537
value: 0.0

773514
type: LocalParameter
value: 0.0

773502
type: LocalParameter
units: 716537
value: 999999.0

773490
type: LocalParameter
units: 716537
value: 0.0

773466
type: SpeciesReference
stoichiometry: 1.0
species: 258902

773406
type: SpeciesReference
stoichiometry: 1.0
species: 251222

773442
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species: 243563

262461
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_tRNA_Pro__R

295938
type: Reaction
reactant: 874941
product: 874965
reactant: 874953
reversible: false
name: R_guanine_transport_in_via_proton_symport__periplasm_
kinetic law: 874989
product: 874977
fast: false
notes: GENE_ASSOCIATION: b3654 PROTEIN_ASSOCIATION: YicE SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:

874941
type: SpeciesReference
stoichiometry: 1.0
species: 251062

251062
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Guanine_C5H5N5O

874965
type: SpeciesReference
stoichiometry: 1.0
species: 251022

251022
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Guanine_C5H5N5O

874953
type: SpeciesReference
stoichiometry: 1.0
species: 251382

875052
type: LocalParameter
value: -0.001003

875039
type: LocalParameter
units: 716537
value: 0.0

875027
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value: 0.0

875014
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units: 716537
value: 999999.0

875002
type: LocalParameter
units: 716537
value: 0.0

874977
type: SpeciesReference
stoichiometry: 1.0
species: 251342

302978
type: Reaction
name: R_nucleoside_diphosphate_kinase__ATPdUDP_
fast: false
product: 923888
kinetic law: 923900
reactant: 923864
notes: GENE_ASSOCIATION: ( b0474 or b2518 ) PROTEIN_ASSOCIATION: ( Adk ) or ( Ndk ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 2.7.4.6
reversible: true
reactant: 923852
product: 923876

923888
type: SpeciesReference
stoichiometry: 1.0
species: 246483

246483
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dUTP_C9H11N2O14P3

923960
type: LocalParameter
value: 0.0

923948
type: LocalParameter
units: 716537
value: 0.0

923936
type: LocalParameter
value: 0.0

923924
type: LocalParameter
units: 716537
value: 999999.0

923912
type: LocalParameter
units: 716537
value: -999999.0

923864
type: SpeciesReference
stoichiometry: 1.0
species: 246343

246343
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dUDP_C9H11N2O11P2

923852
type: SpeciesReference
stoichiometry: 1.0
species: 241883

923876
type: SpeciesReference
stoichiometry: 1.0
species: 239803

281060
type: Reaction
notes: GENE_ASSOCIATION: ( b2964 or b2393 ) PROTEIN_ASSOCIATION: ( NupG ) or ( NupCec ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
fast: false
reactant: 785590
product: 785614
reversible: false
kinetic law: 785638
name: R_deoxycytidine_transport_in_via_proton_symport__periplasm_
product: 785626
reactant: 785602

785590
type: SpeciesReference
stoichiometry: 1.0
species: 244903

244903
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Deoxycytidine_C9H13N3O4

785614
type: SpeciesReference
stoichiometry: 1.0
species: 244863

785703
type: LocalParameter
value: 0.0

785690
type: LocalParameter
units: 716537
value: 0.0

785677
type: LocalParameter
value: 0.0

785664
type: LocalParameter
units: 716537
value: 999999.0

785651
type: LocalParameter
units: 716537
value: 0.0

785626
type: SpeciesReference
stoichiometry: 1.0
species: 251342

785602
type: SpeciesReference
stoichiometry: 1.0
species: 251382

264301
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_L_Valine_C5H11NO2

313177
type: Reaction
kinetic law: 993361
reactant: 993322
name: R_tyrosine_transaminase
reversible: true
reactant: 993309
product: 993335
product: 993348
fast: false
notes: GENE_ASSOCIATION: ( b4054 or b0928 ) PROTEIN_ASSOCIATION: ( TyrB ) or ( AspC ) SUBSYSTEM: S_Tyrosine__Tryptophan__and_Phenylalanine_Metabolism PROTEIN_CLASS: 2.6.1.5

993421
type: LocalParameter
value: 0.0

993409
type: LocalParameter
units: 716537
value: -0.101755

993397
type: LocalParameter
value: 0.0

993385
type: LocalParameter
units: 716537
value: 999999.0

993373
type: LocalParameter
units: 716537
value: -999999.0

993322
type: SpeciesReference
stoichiometry: 1.0
species: 262961

262961
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Tyrosine_C9H11NO3

993309
type: SpeciesReference
stoichiometry: 1.0
species: 240103

993335
type: SpeciesReference
stoichiometry: 1.0
species: 236354

236354
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_3__4_Hydroxyphenyl_pyruvate_C9H7O4

993348
type: SpeciesReference
stoichiometry: 1.0
species: 249962

271440
type: Reaction
product: 723074
reactant: 723026
product: 723062
reactant: 723038
product: 723086
notes: GENE_ASSOCIATION: b2836 PROTEIN_ASSOCIATION: Aas SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 2.3.1.40
fast: false
reactant: 723050
name: R_2_acyl_glycerophospho_glycerol_acyltransferase__n_C181_
reversible: false
kinetic law: 723098

723074
type: SpeciesReference
stoichiometry: 1.0
species: 258322

258322
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Phosphatidylglycerol__dioctadec_11_enoyl__n_C181__C42H78O10P1

723026
type: SpeciesReference
stoichiometry: 1.0
species: 235254

235254
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Acyl_sn_glycero_3_phosphoglycerol__n_C181__C24H46O9P1

723062
type: SpeciesReference
stoichiometry: 1.0
species: 240703

723038
type: SpeciesReference
stoichiometry: 1.0
species: 241883

723086
type: SpeciesReference
stoichiometry: 1.0
species: 259141

723050
type: SpeciesReference
stoichiometry: 1.0
species: 256842

256842
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_octadecenoate__n_C181__C18H33O2

723158
type: LocalParameter
value: -0.001505

723146
type: LocalParameter
units: 716537
value: 0.0

723134
type: LocalParameter
value: 0.0

723122
type: LocalParameter
units: 716537
value: 999999.0

723110
type: LocalParameter
units: 716537
value: 0.0

298358
type: Reaction
name: R_ketol_acid_reductoisomerase__2_Acetolactate_
product: 889675
reactant: 889627
reactant: 889639
notes: GENE_ASSOCIATION: b3774 PROTEIN_ASSOCIATION: IlvCec SUBSYSTEM: S_Valine__Leucine__and_Isoleucine_Metabolism PROTEIN_CLASS: 1.1.1.86
reversible: true
fast: false
reactant: 889651
product: 889663
kinetic law: 889687

889675
type: SpeciesReference
stoichiometry: 1.0
species: 255982

889627
type: SpeciesReference
stoichiometry: 1.0
species: 235294

235294
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M__S__2_Aceto_2_hydroxybutanoate_C6H9O4

889639
type: SpeciesReference
stoichiometry: 1.0
species: 251342

889651
type: SpeciesReference
stoichiometry: 1.0
species: 256002

889663
type: SpeciesReference
stoichiometry: 1.0
species: 234554

234554
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M__R__2_3_Dihydroxy_3_methylpentanoate_C6H11O4

889748
type: LocalParameter
value: 0.0

889736
type: LocalParameter
units: 716537
value: 0.214012

889724
type: LocalParameter
value: 0.0

889712
type: LocalParameter
units: 716537
value: 999999.0

889699
type: LocalParameter
units: 716537
value: -999999.0

282619
type: Reaction
reversible: false
product: 795520
notes: GENE_ASSOCIATION: ( b2251 or b3640 ) PROTEIN_ASSOCIATION: ( YfaO ) or ( Dutec ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.6.1.23
product: 795508
product: 795532
name: R_dUTP_diphosphatase
reactant: 795496
fast: false
reactant: 795484
kinetic law: 795544

795520
type: SpeciesReference
stoichiometry: 1.0
species: 251342

795508
type: SpeciesReference
stoichiometry: 1.0
species: 246363

246363
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dUMP_C9H11N2O8P

795532
type: SpeciesReference
stoichiometry: 1.0
species: 259141

795496
type: SpeciesReference
stoichiometry: 1.0
species: 251222

795484
type: SpeciesReference
stoichiometry: 1.0
species: 246483

795606
type: LocalParameter
value: -0.004012

795594
type: LocalParameter
units: 716537
value: 0.0

795582
type: LocalParameter
value: 0.0

795569
type: LocalParameter
units: 716537
value: 999999.0

795556
type: LocalParameter
units: 716537
value: 0.0

244063
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Hydrogen_cyanide_CHN

240023
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_S_Adenosyl_L_homocysteine_C14H20N6O5S

238643
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Acetate_C2H3O2

258282
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Phosphatidylglycerol__dioctadecanoyl__n_C180__C42H82O10P1

287619
type: Reaction
kinetic law: 821391
product: 821379
reactant: 821367
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_D_lactate_exchange

821452
type: LocalParameter
value: -0.044135

821440
type: LocalParameter
units: 716537
value: 0.0

821428
type: LocalParameter
value: 0.0

821416
type: LocalParameter
units: 716537
value: 999999.0

821403
type: LocalParameter
units: 716537
value: 0.0

821379
type: SpeciesReference
stoichiometry: 1.0
species: 268621

268621
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Lactate_C3H5O3

821367
type: SpeciesReference
stoichiometry: 1.0
species: 253142

247003
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Fructose_6_phosphate_C6H11O9P

313736
type: Reaction
reactant: 999315
product: 999339
reactant: 999303
kinetic law: 999363
product: 999327
reversible: false
product: 999351
name: R_uroporphyrinogen_methyltransferase
notes: GENE_ASSOCIATION: ( b3803 or b3368 ) PROTEIN_ASSOCIATION: ( HemX ) or ( CysG ) SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.1.1.107
fast: false

999315
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stoichiometry: 1.0
species: 264001

264001
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Uroporphyrinogen_III_C40H36N4O16

999339
type: SpeciesReference
stoichiometry: 1.0
species: 246083

246083
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dihydrosirohydrochlorin_C42H41N4O16

999303
type: SpeciesReference
stoichiometry: 2.0
species: 240643

240643
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_S_Adenosyl_L_methionine_C15H23N6O5S

999423
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value: 0.0

999411
type: LocalParameter
units: 716537
value: 1.64E-4

999399
type: LocalParameter
value: 0.0

999387
type: LocalParameter
units: 716537
value: 999999.0

999375
type: LocalParameter
units: 716537
value: 0.0

999327
type: SpeciesReference
stoichiometry: 2.0
species: 240023

999351
type: SpeciesReference
stoichiometry: 1.0
species: 251342

277300
type: Reaction
name: R_L_asparagine_reversible_transport_via_proton_symport__periplasm_
reactant: 759360
notes: GENE_ASSOCIATION: b1453 PROTEIN_ASSOCIATION: AnsP SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
kinetic law: 759408
reactant: 759372
product: 759396
reversible: true
fast: false
product: 759384

759360
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stoichiometry: 1.0
species: 241643

241643
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_L_Asparagine_C4H8N2O3

759468
type: LocalParameter
value: 0.0

759456
type: LocalParameter
units: 716537
value: 0.0

759444
type: LocalParameter
value: 0.0

759432
type: LocalParameter
units: 716537
value: 999999.0

759420
type: LocalParameter
units: 716537
value: -999999.0

759372
type: SpeciesReference
stoichiometry: 1.0
species: 251382

759396
type: SpeciesReference
stoichiometry: 1.0
species: 251342

759384
type: SpeciesReference
stoichiometry: 1.0
species: 241603

241603
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Asparagine_C4H8N2O3

237683
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_4_Aminobutanoate_C4H9NO2

296618
type: Reaction
name: R_heptosyltransferase_I__LPS_core_synthesis_
product: 878868
notes: GENE_ASSOCIATION: b3621 PROTEIN_ASSOCIATION: WaaC SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
product: 878892
reactant: 878844
reversible: false
reactant: 878856
kinetic law: 878904
fast: false
product: 878880

878868
type: SpeciesReference
stoichiometry: 1.0
species: 239803

878892
type: SpeciesReference
stoichiometry: 1.0
species: 251922

251922
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_heptosyl_kdo2_lipidA_C117H208N2O45P2

878844
type: SpeciesReference
stoichiometry: 1.0
species: 239863

878856
type: SpeciesReference
stoichiometry: 1.0
species: 253442

253442
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_KDO_2__lipid__A__C110H196N2O39P2

878964
type: LocalParameter
value: 0.0

878952
type: LocalParameter
units: 716537
value: 0.0

878940
type: LocalParameter
value: 0.0

878928
type: LocalParameter
units: 716537
value: 999999.0

878916
type: LocalParameter
units: 716537
value: 0.0

878880
type: SpeciesReference
stoichiometry: 1.0
species: 251342

310057
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kinetic law: 972303
product: 972291
reactant: 972279
notes: GENE_ASSOCIATION: ( b0061 or b4198 or b3583 ) PROTEIN_ASSOCIATION: ( AraD ) or ( SgaE ) or ( SgbE ) SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 5.1.3.4
fast: false
reversible: true
name: R_L_ribulose_phosphate_4_epimerase

972363
type: LocalParameter
value: 0.0

972351
type: LocalParameter
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value: 0.0

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260102
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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313277
type: Reaction
notes: GENE_ASSOCIATION: b0480 PROTEIN_ASSOCIATION: UshA SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 3.6.1.45
name: R_UDP_N_acetyl_D_glucosamine_pyrophosphohydrolase__periplasm_
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product: 994269
product: 994245
reactant: 994233
reactant: 994220
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reversible: false
kinetic law: 994281

994257
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species: 251382

994269
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species: 263901

263901
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_UMP_C9H11N2O9P

994245
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species: 239023

994233
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species: 263281

263281
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has only substance units: false
initial concentration: NaN
initial amount: NaN
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994220
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species: 251262

994341
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994329
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994317
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994305
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994293
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units: 716537
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302657
type: Reaction
kinetic law: 919718
product: 919706
reactant: 919694
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 5.3.1.23
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919766
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919754
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919742
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species: 238123

238123
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_5_Methylthio_5_deoxy_D_ribulose_1_phosphate_C6H11O7PS

919694
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species: 238103

238103
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initial concentration: NaN
initial amount: NaN
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name: M_5_Methylthio_5_deoxy_D_ribose_1_phosphate_C6H11O7PS

284759
type: Reaction
kinetic law: 807543
product: 807531
reactant: 807519
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_D_Alanyl_D_alanine_exchange

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807591
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units: 716537
value: 0.0

807579
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807555
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units: 716537
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807531
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stoichiometry: 1.0
species: 265741

265741
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_D_Alanyl_D_alanine_C6H12N2O3

807519
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species: 240363

240363
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Alanyl_D_alanine_C6H12N2O3

274460
type: Reaction
notes: GENE_ASSOCIATION: b0120 PROTEIN_ASSOCIATION: SpeD SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 4.1.1.50
fast: false
kinetic law: 741625
reactant: 741576
product: 741613
reactant: 741588
reversible: false
name: R_adenosylmethionine_decarboxylase
product: 741600

741685
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741673
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units: 716537
value: 0.0

741661
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741649
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units: 716537
value: 999999.0

741637
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units: 716537
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741576
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stoichiometry: 1.0
species: 240643

741613
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stoichiometry: 1.0
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741588
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species: 251342

741600
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species: 240663

266541
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Decanoate__n_C100__C10H19O2

308177
type: Reaction
reactant: 960513
reversible: false
kinetic law: 960561
product: 960549
product: 960537
reactant: 960501
name: R_phosphoenolpyruvate_carboxykinase
product: 960525
notes: GENE_ASSOCIATION: b3403 PROTEIN_ASSOCIATION: Pck SUBSYSTEM: S_Anaplerotic_Reactions PROTEIN_CLASS: 4.1.1.49
fast: false

960513
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species: 256682

960621
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960609
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value: 0.0

960597
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960585
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960573
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units: 716537
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960549
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species: 258062

960537
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species: 243283

960501
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stoichiometry: 1.0
species: 241883

960525
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species: 239803

285639
type: Reaction
kinetic law: 811802
product: 811790
reactant: 811778
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_dGMP_exchange

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811852
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units: 716537
value: 0.0

811839
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811826
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units: 716537
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811814
type: LocalParameter
units: 716537
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811790
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stoichiometry: 1.0
species: 266621

266621
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_dGMP_C10H12N5O7P

811778
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species: 245083

245083
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_dGMP_C10H12N5O7P

296298
type: Reaction
reactant: 876907
reversible: false
fast: false
reactant: 876919
kinetic law: 876968
product: 876944
product: 876956
product: 876931
name: R_3_hydroxyacyl_CoA_dehydrogenase__3_oxododecanoyl_CoA_
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) PROTEIN_ASSOCIATION: ( FadB ) or ( FadJ ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.35

876907
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stoichiometry: 1.0
species: 236834

876919
type: SpeciesReference
stoichiometry: 1.0
species: 255942

877029
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877017
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units: 716537
value: 0.0

877004
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876992
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units: 716537
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876980
type: LocalParameter
units: 716537
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876944
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876956
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876931
type: SpeciesReference
stoichiometry: 1.0
species: 237324

237324
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_3_Oxododecanoyl_CoA_C33H52N7O18P3S

283239
type: Reaction
kinetic law: 799608
product: 799596
reactant: 799584
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
fast: false
reversible: false
name: R_enterobacterial_common_antigen__x4__core_oligosaccharide_lipid_A_transport__periplasm_to_extracellular_

799669
type: LocalParameter
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799657
type: LocalParameter
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799645
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799633
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799620
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799596
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species: 246603

246603
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initial amount: NaN
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799584
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species: 246623

246623
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286299
type: Reaction
kinetic law: 815003
product: 814991
reactant: 814978
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_D_Fructuronate_exchange

815063
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815051
type: LocalParameter
units: 716537
value: 0.0

815039
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815027
type: LocalParameter
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815015
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814991
type: SpeciesReference
stoichiometry: 1.0
species: 267281

814978
type: SpeciesReference
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species: 248242

257702
type: Species
constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233054

275980
type: Reaction
kinetic law: 751011
product: 750999
reactant: 750987
notes: GENE_ASSOCIATION: b4085 PROTEIN_ASSOCIATION: AlsE SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
fast: false
reversible: true
name: R_Allulose_6_phosphate_epimerase

751072
type: LocalParameter
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751060
type: LocalParameter
units: 716537
value: 0.0

751048
type: LocalParameter
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751035
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value: 999999.0

751023
type: LocalParameter
units: 716537
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750999
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stoichiometry: 1.0
species: 246983

246983
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Fructose_6_phosphate_C6H11O9P

750987
type: SpeciesReference
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species: 240583

240583
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Allulose_6_phosphate_C6H11O9P

303057
type: Reaction
kinetic law: 924760
name: R_nickle__Ni2__transport_out_via_proton_antiport__periplasm_
notes: GENE_ASSOCIATION: ( b3915 or b0752 ) PROTEIN_ASSOCIATION: ( FieF ) or ( ZitB ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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fast: false
reactant: 924723
product: 924748
reversible: false
reactant: 924711

924820
type: LocalParameter
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924808
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units: 716537
value: 0.0

924796
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924784
type: LocalParameter
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924772
type: LocalParameter
units: 716537
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924736
type: SpeciesReference
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species: 251342

924723
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species: 251382

924748
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species: 256142

256142
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_nickel_Ni

924711
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species: 256102

256102
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_nickel_Ni

308237
type: Reaction
reactant: 960886
product: 960899
name: R_polyphosphate_kinase
notes: GENE_ASSOCIATION: b2501 PROTEIN_ASSOCIATION: Ppk SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS: 2.7.4.1
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kinetic law: 960923
fast: false
product: 960911
reactant: 960874

960886
type: SpeciesReference
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species: 259141

960899
type: SpeciesReference
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species: 239803

960983
type: LocalParameter
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960971
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value: 0.0

960959
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960947
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960935
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960911
type: SpeciesReference
stoichiometry: 1.0
species: 259162

259162
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Inorganic_triphosphate_HO10P3

960874
type: SpeciesReference
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species: 241883

292238
type: Reaction
product: 851215
name: R_glycerol_3_phosphate_acyltransferase__C180_
reversible: false
product: 851227
reactant: 851191
fast: false
reactant: 851203
notes: GENE_ASSOCIATION: b4041 PROTEIN_ASSOCIATION: PlsB SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 2.3.1.15
kinetic law: 851239

851215
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species: 234074

234074
type: Species
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_octadecanoyl_sn_glycerol_3_phosphate_C21H41O7P1

851227
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species: 238303

851191
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species: 250302

851203
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species: 256762

851299
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851287
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851275
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851263
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851251
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value: 0.0

263581
type: Species
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in compartment: 233034

289579
type: Reaction
kinetic law: 830873
product: 830861
reactant: 830849
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_UDPglucose_exchange

830934
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830922
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830909
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830897
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830861
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species: 270180

270180
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initial concentration: NaN
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in compartment: 233014
name: M_UDPglucose_C15H22N2O17P2

830849
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species: 263621

290859
type: Reaction
product: 839897
product: 839909
name: R_FMNH2_dependent_monooxygenase__sulfoacetate_
fast: false
product: 839933
product: 839921
kinetic law: 839957
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reactant: 839873
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notes: GENE_ASSOCIATION: b0935 PROTEIN_ASSOCIATION: SsuD SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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839897
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species: 247923

839909
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839933
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species: 251222

839921
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840018
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840006
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839994
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839982
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839970
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839873
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species: 256562

839860
type: SpeciesReference
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839945
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species: 260583

260583
type: Species
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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839885
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species: 261061

261061
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name: M_sulfoacetate_C2H2O5S

272160
type: Reaction
notes: GENE_ASSOCIATION: b1093 PROTEIN_ASSOCIATION: FabG SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.1.1.100
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fast: false
kinetic law: 727459
name: R_3_oxoacyl_acyl_carrier_protein_reductase__n_C180_
product: 727447
reactant: 727399
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reactant: 727423

727435
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species: 237014

237014
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727411
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species: 251342

727521
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727509
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727497
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237504
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727423
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species: 256002

295978
type: Reaction
kinetic law: 875184
product: 875172
reactant: 875160
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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reversible: true
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875245
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875232
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875220
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875172
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875160
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273880
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product: 738206
product: 738218
name: R_acyl_CoA_dehydrogenase__decanoyl_CoA_
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reactant: 738182
notes: GENE_ASSOCIATION: b0221 PROTEIN_ASSOCIATION: FadE SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.3.99.3
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738206
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738218
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738182
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species: 244723

244723
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738290
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738278
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738266
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738194
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267101
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initial amount: NaN
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233314
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254502
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237094
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287659
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_Lactose_exchange

821644
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value: -0.191588

821632
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units: 716537
value: 0.0

821620
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value: 0.0

821608
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units: 716537
value: 999999.0

821596
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units: 716537
value: 0.0

821572
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stoichiometry: 1.0
species: 268661

268661
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Lactose_C12H22O11

821560
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253302
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Lactose_C12H22O11

253622
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_lipoprotein_XC16H30O1

245183
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dGTP_C10H12N5O13P3

304977
type: Reaction
reactant: 939288
notes: GENE_ASSOCIATION: b0386 PROTEIN_ASSOCIATION: ProC SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 1.5.1.2
reactant: 939264
reversible: false
product: 939301
product: 939314
fast: false
name: R_pyrroline_5_carboxylate_reductase
reactant: 939276
kinetic law: 939326

939288
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species: 256002

939264
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stoichiometry: 1.0
species: 234114

234114
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_Pyrroline_5_carboxylate_C5H6NO2

939301
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species: 255982

939314
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stoichiometry: 1.0
species: 259322

939276
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species: 251342

939388
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939375
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units: 716537
value: 0.162885

939363
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value: 0.0

939351
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units: 716537
value: 999999.0

939338
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units: 716537
value: 0.0

266521
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_dAMP_C10H12N5O6P

247023
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_D_Fructose_6_phosphate_C6H11O9P

262441
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_tRNA_Phe__R

301398
type: Reaction
kinetic law: 908751
product: 908739
product: 908727
reactant: 908715
notes: GENE_ASSOCIATION: ( b0149 or b3396 ) PROTEIN_ASSOCIATION: ( MrcB ) or ( MrcA ) SUBSYSTEM: S_Murein_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_murein_crosslinking_transpeptidase_1B_A2pm_A2pm___periplasm_

908811
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908799
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units: 716537
value: 0.0

908787
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value: 0.0

908775
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units: 716537
value: 999999.0

908763
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units: 716537
value: 0.0

908739
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species: 255662

255662
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034

908727
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species: 240383

240383
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_D_Alanyl_D_alanine_C6H12N2O3

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255642
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034

254582
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Methionine_C5H10NO2S

314116
type: Reaction
notes: GENE_ASSOCIATION: ( b3577 and b3578 and b3579 ) PROTEIN_ASSOCIATION: ( YiaM and YiaN and YiaO ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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product: 003810
reactant: 003798
kinetic law: 003834
product: 003822
reversible: false
name: R_L_xylulose_transport_in_via_proton_symport__periplasm_
fast: false

003786
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species: 251382

003810
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stoichiometry: 1.0
species: 251342

003798
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stoichiometry: 1.0
species: 264721

003896
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value: 0.0

003883
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units: 716537
value: 0.0

003870
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value: 0.0

003858
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units: 716537
value: 999999.0

003846
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units: 716537
value: 0.0

003822
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stoichiometry: 1.0
species: 264681

264681
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Xylulose_C5H10O5

294758
type: Reaction
product: 867478
notes: GENE_ASSOCIATION: ( b3553 or b1033 ) PROTEIN_ASSOCIATION: ( YiaE ) or ( YcdW ) SUBSYSTEM: S_Glyoxylate_Metabolism PROTEIN_CLASS: 1.1.1.26
reactant: 867466
product: 867490
reactant: 867442
reversible: false
fast: false
name: R_Glycolate_dehydrogenase__NADP_
reactant: 867454
kinetic law: 867502

867478
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species: 250462

867466
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stoichiometry: 1.0
species: 256002

867490
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stoichiometry: 1.0
species: 255982

867442
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stoichiometry: 1.0
species: 250062

867454
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stoichiometry: 1.0
species: 251342

867563
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867551
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units: 716537
value: 0.0

867539
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value: 0.0

867527
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units: 716537
value: 999999.0

867515
type: LocalParameter
units: 716537
value: 0.0

243863
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Cytosine_C4H5N3O

312917
type: Reaction
kinetic law: 990750
product: 990738
reactant: 990725
reactant: 990713
notes: GENE_ASSOCIATION: b3519 PROTEIN_ASSOCIATION: TreF SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 3.2.1.28
fast: false
reversible: false
name: R_alpha_alpha_trehalase

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990799
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units: 716537
value: 0.0

990786
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value: 0.0

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units: 716537
value: 999999.0

990762
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units: 716537
value: 0.0

990738
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species: 249522

990725
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stoichiometry: 1.0
species: 262162

990713
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species: 251222

279640
type: Reaction
product: 774106
fast: false
kinetic law: 774118
reversible: true
name: R_gamma_butyrobetainyl_CoA_carnitine_CoA_transferase
notes: GENE_ASSOCIATION: b0038 PROTEIN_ASSOCIATION: CaiB SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS:
reactant: 774082
product: 774094
reactant: 774069

774106
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stoichiometry: 1.0
species: 249182

774179
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774167
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units: 716537
value: 0.0

774155
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value: 0.0

774143
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units: 716537
value: 999999.0

774131
type: LocalParameter
units: 716537
value: -999999.0

774082
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stoichiometry: 1.0
species: 243763

774094
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stoichiometry: 1.0
species: 243823

243823
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Carnitinyl_CoA_C28H46N8O18P3S

774069
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stoichiometry: 1.0
species: 241923

277240
type: Reaction
name: R_asparagine_synthetase
reversible: false
product: 758951
product: 758939
product: 758963
kinetic law: 758988
reactant: 758903
notes: GENE_ASSOCIATION: b3744 PROTEIN_ASSOCIATION: AsnA SUBSYSTEM: S_Alanine_and_Aspartate_Metabolism PROTEIN_CLASS: 6.3.1.1
reactant: 758915
product: 758976
fast: false
reactant: 758927

758951
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stoichiometry: 1.0
species: 241603

758939
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stoichiometry: 1.0
species: 240703

758963
type: SpeciesReference
stoichiometry: 1.0
species: 251342

759048
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value: 0.0

759036
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units: 716537
value: 0.177619

759024
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value: 0.0

759012
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units: 716537
value: 999999.0

759000
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units: 716537
value: 0.0

758903
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stoichiometry: 1.0
species: 241763

241763
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Aspartate_C4H6NO4

758915
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species: 241883

758976
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stoichiometry: 1.0
species: 259141

758927
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stoichiometry: 1.0
species: 256042

306577
type: Reaction
notes: GENE_ASSOCIATION: ( b1278 or b0418 ) PROTEIN_ASSOCIATION: ( PgpB ) or ( PgpA ) SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.3.27
reversible: false
product: 950268
reactant: 950256
kinetic law: 950292
fast: false
name: R_phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C161_
product: 950280
reactant: 950244

950268
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stoichiometry: 1.0
species: 258262

950256
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stoichiometry: 1.0
species: 258542

950352
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value: 0.0

950340
type: LocalParameter
units: 716537
value: 0.0

950328
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value: 0.0

950316
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units: 716537
value: 999999.0

950304
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units: 716537
value: 0.0

950280
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stoichiometry: 1.0
species: 258942

950244
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stoichiometry: 1.0
species: 251262

263561
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014

285679
type: Reaction
kinetic law: 811996
product: 811984
reactant: 811972
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Dihydroxyacetone_exchange

812056
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value: -0.048148

812044
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units: 716537
value: 0.0

812032
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value: 0.0

812020
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units: 716537
value: 999999.0

812008
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units: 716537
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811984
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stoichiometry: 1.0
species: 266661

266661
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Dihydroxyacetone_C3H6O3

811972
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stoichiometry: 1.0
species: 245223

245223
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Dihydroxyacetone_C3H6O3

310077
type: Reaction
reversible: false
notes: GENE_ASSOCIATION: b3629 PROTEIN_ASSOCIATION: WaaS SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
product: 972399
product: 972423
reactant: 972387
reactant: 972375
product: 972411
name: R_rhamnosyltransferase_I__LPS_core_biosynthesis_
fast: false
kinetic law: 972435

972399
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stoichiometry: 1.0
species: 246203

972423
type: SpeciesReference
stoichiometry: 1.0
species: 252342

972387
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stoichiometry: 1.0
species: 253102

253102
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

972375
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stoichiometry: 1.0
species: 246243

246243
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dTDP_L_rhamnose_C16H24N2O15P2

972411
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species: 251342

972495
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value: 0.0

972483
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units: 716537
value: 0.0

972471
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value: 0.0

972459
type: LocalParameter
units: 716537
value: 999999.0

972447
type: LocalParameter
units: 716537
value: 0.0

271120
type: Reaction
notes: GENE_ASSOCIATION: b2836 PROTEIN_ASSOCIATION: Aas SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 2.3.1.40
reactant: 721068
kinetic law: 721116
product: 721092
reversible: false
reactant: 721056
reactant: 721044
product: 721104
name: R_2_acyl_glycerophospho_ethanolamine_acyltransferase__n_C161_
fast: false
product: 721080

721068
type: SpeciesReference
stoichiometry: 1.0
species: 251522

251522
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Hexadecenoate__n_C161__C16H29O2

721176
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value: -0.001505

721164
type: LocalParameter
units: 716537
value: 0.0

721152
type: LocalParameter
value: 0.0

721140
type: LocalParameter
units: 716537
value: 999999.0

721128
type: LocalParameter
units: 716537
value: 0.0

721092
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stoichiometry: 1.0
species: 257902

721056
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stoichiometry: 1.0
species: 241883

721044
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stoichiometry: 1.0
species: 234894

234894
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Acyl_sn_glycero_3_phosphoethanolamine__n_C161__C21H42NO7P1

721104
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stoichiometry: 1.0
species: 259141

721080
type: SpeciesReference
stoichiometry: 1.0
species: 240703

284319
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kinetic law: 805417
product: 805404
reactant: 805391
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_alanine_D_glutamate_meso_2_6_diaminoheptanedioate_exchange

805477
type: LocalParameter
value: -0.243748

805465
type: LocalParameter
units: 716537
value: 0.0

805453
type: LocalParameter
value: 0.0

805441
type: LocalParameter
units: 716537
value: 999999.0

805429
type: LocalParameter
units: 716537
value: 0.0

805404
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stoichiometry: 1.0
species: 265281

265281
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_alanine_D_glutamate_meso_2_6_diaminoheptanedioate_C15H25N4O8

805391
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species: 238403

238403
type: Species
constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_alanine_D_glutamate_meso_2_6_diaminoheptanedioate_C15H25N4O8

306937
type: Reaction
product: 952663
reactant: 952651
kinetic law: 952688
product: 952676
notes: GENE_ASSOCIATION: ( b2987 or b3493 ) PROTEIN_ASSOCIATION: ( PitBec ) or ( PitA ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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name: R_phosphate_reversible_transport_via_symport__periplasm_
reactant: 952639
fast: false

952663
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stoichiometry: 1.0
species: 251342

952651
type: SpeciesReference
stoichiometry: 1.0
species: 258942

952749
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952737
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units: 716537
value: 0.708202

952724
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value: 0.0

952712
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units: 716537
value: 999999.0

952700
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units: 716537
value: -999999.0

952676
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stoichiometry: 1.0
species: 258902

952639
type: SpeciesReference
stoichiometry: 1.0
species: 251382

289919
type: Reaction
name: R_Fructose_6_phosphate_transport_via_phosphate_antiport__periplasm_
reversible: false
product: 833340
fast: false
reactant: 833316
notes: GENE_ASSOCIATION: b3666 PROTEIN_ASSOCIATION: UhpT SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
kinetic law: 833364
reactant: 833328
product: 833352

833340
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stoichiometry: 1.0
species: 246983

833316
type: SpeciesReference
stoichiometry: 2.0
species: 258902

833425
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833413
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units: 716537
value: 0.0

833401
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833389
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units: 716537
value: 999999.0

833377
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units: 716537
value: 0.0

833328
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species: 247023

833352
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species: 258942

271800
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kinetic law: 725132
product: 725120
product: 725108
reactant: 725096
notes: GENE_ASSOCIATION: ( b0180 or b0954 ) PROTEIN_ASSOCIATION: ( FabZ ) or ( FabA ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 4.2.1.61
fast: false
reversible: false
name: R_3_hydroxyacyl_acyl_carrier_protein_dehydratase__n_C181_

725192
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value: 0.0

725180
type: LocalParameter
units: 716537
value: 0.0

725168
type: LocalParameter
value: 0.0

725156
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units: 716537
value: 999999.0

725144
type: LocalParameter
units: 716537
value: 0.0

725120
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stoichiometry: 1.0
species: 261121

261121
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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725108
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species: 251222

725096
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stoichiometry: 1.0
species: 236794

236794
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boundary condition: false
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249202
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_gamma_butyrobetaine_C7H15NO2

301498
type: Reaction
kinetic law: 909340
product: 909328
name: R_murein_D_D_carboxypeptidase__murein5p4p___periplasm_
reactant: 909292
reactant: 909304
product: 909316
notes: GENE_ASSOCIATION: ( b0632 or b3182 or b0839 or b2010 ) PROTEIN_ASSOCIATION: ( DacA ) or ( DacB ) or ( DacC ) or ( DacD ) SUBSYSTEM: S_Murein_Biosynthesis PROTEIN_CLASS: 3.4.16.4
reversible: false
fast: false

909400
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value: 0.0

909388
type: LocalParameter
units: 716537
value: 0.0

909376
type: LocalParameter
value: 0.0

909364
type: LocalParameter
units: 716537
value: 999999.0

909352
type: LocalParameter
units: 716537
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909328
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stoichiometry: 1.0
species: 255502

255502
type: Species
constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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909292
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stoichiometry: 1.0
species: 251262

909304
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stoichiometry: 1.0
species: 255602

255602
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034

909316
type: SpeciesReference
stoichiometry: 1.0
species: 240263

300798
type: Reaction
reactant: 905140
reactant: 905128
product: 905179
product: 905192
product: 905153
kinetic law: 905205
fast: false
reversible: false
notes: GENE_ASSOCIATION: ( b4034 and b4033 and b4032 and b4035 ) PROTEIN_ASSOCIATION: ( MalE and MalF and MalG and MalK ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
product: 905166
reactant: 905116
name: R_maltohexaose_transport_via_ABC_system__periplasm_

905140
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stoichiometry: 1.0
species: 254082

905128
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stoichiometry: 1.0
species: 251222

905179
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stoichiometry: 1.0
species: 254042

254042
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constant: false
boundary condition: false
has only substance units: false
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initial amount: NaN
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name: M_Maltohexaose_C36H62O31

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905116
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280599
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product: 780646
notes: GENE_ASSOCIATION: b2066 PROTEIN_ASSOCIATION: Udk SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS:
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kinetic law: 780683
name: R_cytidine_kinase__GTP_
reactant: 780634
reversible: false
reactant: 780622
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780695
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units: 716537
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780622
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780659
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254622
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initial amount: NaN
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237424
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269820
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initial amount: NaN
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276760
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reactant: 755864
fast: false
product: 755888
name: R_aerobactin_secretion__to_extracellular_
reactant: 755876
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
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product: 755900
reversible: false

755864
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species: 241424

241424
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_aerobactin_minus_Fe3_C22H33N4O13

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species: 251342

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species: 251382

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241343
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initial concentration: NaN
initial amount: NaN
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name: M_aerobactin_minus_Fe3_C22H33N4O13

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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_D_Methionine_C5H10NO2S

283799
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kinetic law: 802871
reactant: 802811
name: R_ethanesulfonate_transport_via_ABC_system__periplasm_
product: 802835
reactant: 802787
reactant: 802799
product: 802847
product: 802823
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fast: false
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802931
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802919
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802907
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802895
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units: 716537
value: 999999.0

802883
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units: 716537
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802811
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stoichiometry: 1.0
species: 246883

246883
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_ethanesulfonate_C2H5O3S

802835
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species: 246843

246843
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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802823
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802859
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species: 258902

306677
type: Reaction
kinetic law: 950910
reversible: false
fast: false
reactant: 950862
product: 950886
name: R_Phosphatidylglycerol_synthase__n_C120_
product: 950874
notes: GENE_ASSOCIATION: b1912 PROTEIN_ASSOCIATION: PgsA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 2.7.8.5
product: 950898
reactant: 950850

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950959
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units: 716537
value: 0.0

950946
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units: 716537
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950922
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units: 716537
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950862
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950886
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950874
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950898
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species: 258362

258362
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Phosphatidylglycerophosphate__didodecanoyl__n_C120__C30H57O13P2

950850
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species: 242583

242583
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259862
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boundary condition: false
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initial amount: NaN
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267501
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boundary condition: true
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initial amount: NaN
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name: M_beta_D_Galactose_C6H12O6

301438
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kinetic law: 908979
notes: GENE_ASSOCIATION: ( b0632 or b3182 or b0839 or b2010 ) PROTEIN_ASSOCIATION: ( DacA ) or ( DacB ) or ( DacC ) or ( DacD ) SUBSYSTEM: S_Murein_Biosynthesis PROTEIN_CLASS: 3.4.16.4
reactant: 908931
product: 908967
reactant: 908943
name: R_murein_D_D_carboxypeptidase__murein5px4p___periplasm_
fast: false
product: 908955

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909027
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units: 716537
value: 0.0

909015
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909003
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units: 716537
value: 999999.0

908991
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units: 716537
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908931
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stoichiometry: 1.0
species: 251262

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stoichiometry: 1.0
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255542
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initial amount: NaN
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908943
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species: 255682

255682
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initial amount: NaN
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908955
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310417
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reversible: false
reactant: 974499
name: R_ribonucleoside_triphosphate_reductase__ATP___flavodoxin_
product: 974511
notes: GENE_ASSOCIATION: ( ( b2895 and b3924 and b4238 and b4237 ) or ( b2895 and b4238 ) or ( b0684 and b4238 ) or ( b0684 and b3924 and b4238 and b4237 ) ) PROTEIN_ASSOCIATION: ( FldB and Fpr and NrdD and NrdG ) or ( FldB and NrdD ) or ( FldA and NrdD ) or ( FldA and Fpr and NrdD and NrdG ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS:
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fast: false
product: 974535
product: 974523
kinetic law: 974547

974499
type: SpeciesReference
stoichiometry: 1.0
species: 247883

247883
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_flavodoxin__reduced__XH2

974511
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stoichiometry: 1.0
species: 244583

244583
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dATP_C10H12N5O12P3

974487
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species: 241883

974535
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species: 251222

974523
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species: 247863

247863
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_flavodoxin__oxidized__X

974607
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974595
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units: 716537
value: 0.019279

974583
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974571
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974559
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259242
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_5_Phospho_beta_D_ribosylamine_C5H11NO7P

274840
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fast: false
reactant: 743968
notes: GENE_ASSOCIATION: ( b4169 or b2435 or b2817 ) PROTEIN_ASSOCIATION: ( AmiB ) or ( AmiA ) or ( AmiC ) SUBSYSTEM: S_Murein_Recycling PROTEIN_CLASS:
kinetic law: 744004
reversible: false
product: 743992
product: 743980
name: R_N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tripeptide_amidase__periplasm_
reactant: 743955

743968
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species: 251262

744064
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744052
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value: 0.0

744040
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744028
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744016
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743992
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stoichiometry: 1.0
species: 240883

240883
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramic_acid_C19H29N2O12

743980
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species: 238424

743955
type: SpeciesReference
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species: 240783

278980
type: Reaction
kinetic law: 770119
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS:
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name: R_cardiolipin_hydrolase__periplasm__n_C160_
product: 770107
reactant: 770071
fast: false
reversible: false
product: 770095
product: 770083

770179
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770167
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units: 716537
value: 0.0

770155
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770143
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value: 999999.0

770131
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770059
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stoichiometry: 1.0
species: 243143

243143
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_cardiolipin__tetrahexadecanoyl__n_C160__C73H140O17P2

770107
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species: 258222

258222
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Phosphatidylglycerol__dihexadecanoyl__n_C160__C38H74O10P1

770071
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stoichiometry: 1.0
species: 251262

770095
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species: 257402

257402
type: Species
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_1_2_dihexadecanoyl_sn_glycerol_3_phosphate_C35H67O8P1

770083
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species: 251382

300098
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product: 900763
reactant: 900715
notes: GENE_ASSOCIATION: b3825 PROTEIN_ASSOCIATION: PldB SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.5
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reactant: 900727
reversible: false
fast: false
product: 900751
product: 900739
kinetic law: 900775

900763
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species: 251342

900715
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species: 234734

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species: 251222

900751
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species: 248403

900739
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species: 244963

244963
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Dodecanoate__n_C120__C12H23O2

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900811
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900799
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900787
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278020
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kinetic law: 764047
product: 764035
reactant: 764023
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_butanesulfonate_transport_via_diffusion__extracellular_to_periplasm_

764107
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764095
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units: 716537
value: 0.0

764083
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764071
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764059
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764035
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764023
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species: 242183

242183
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_butanesulfonate_C4H9O3S

243063
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Chloride_Cl

296398
type: Reaction
reactant: 877561
name: R_3_hydroxycinnamic_acid_transport_via_proton_symport__reversible__periplasm_
fast: false
reversible: true
reactant: 877573
product: 877585
product: 877597
kinetic law: 877609
notes: GENE_ASSOCIATION: b0353 PROTEIN_ASSOCIATION: MhpT SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:

877561
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species: 236734

236734
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_3_hydroxycinnamic_acid_C9H7O3

877573
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species: 251382

877585
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stoichiometry: 1.0
species: 236694

236694
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initial concentration: NaN
initial amount: NaN
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name: M_3_hydroxycinnamic_acid_C9H7O3

877597
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species: 251342

877670
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877658
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877645
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877633
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value: 999999.0

877621
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276380
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kinetic law: 753499
reversible: false
reactant: 753451
product: 753475
fast: false
product: 753487
notes: GENE_ASSOCIATION: b1982 PROTEIN_ASSOCIATION: Amn SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.2.2.4
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reactant: 753463

753560
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753548
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753536
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753524
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753512
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753451
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species: 240703

753475
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species: 239583

239583
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Adenine_C5H5N5

753487
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species: 259841

259841
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_alpha_D_Ribose_5_phosphate_C5H9O8P

753463
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species: 251222

305917
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name: R_phosphofructokinase
notes: GENE_ASSOCIATION: ( b3916 or b1723 ) PROTEIN_ASSOCIATION: ( PfkA ) or ( PfkB ) SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 2.7.1.11
reactant: 945688
reactant: 945676
product: 945724
reversible: false
product: 945712
product: 945700
fast: false
kinetic law: 945736

945688
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species: 246983

945676
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945724
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945712
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species: 247183

945700
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species: 239803

945796
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945784
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value: 5.164242

945772
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945760
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945748
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284359
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kinetic law: 805609
product: 805597
reactant: 805585
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Acetoacetate_exchange

805670
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805658
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units: 716537
value: 0.0

805646
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805634
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805622
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805597
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stoichiometry: 1.0
species: 265341

265341
type: Species
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Acetoacetate_C4H5O3

805585
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stoichiometry: 1.0
species: 238703

238703
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Acetoacetate_C4H5O3

310157
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kinetic law: 972892
product: 972880
reactant: 972868
notes: GENE_ASSOCIATION: b3903 PROTEIN_ASSOCIATION: RhaA SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 5.3.1.14
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name: R_L_rhamnose_isomerase

972953
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972940
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value: 0.0

972928
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972916
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972904
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972880
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species: 260041

260041
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_L_Rhamnulose_C6H12O5

972868
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species: 260042

260042
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_L_Rhamnose_C6H12O5

237544
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275420
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kinetic law: 747500
product: 747488
reactant: 747476
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
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units: 716537
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units: 716537
value: 999999.0

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species: 240143

240143
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_2_Oxoglutarate_C5H4O5

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boundary condition: false
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initial amount: NaN
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name: M_2_Oxoglutarate_C5H4O5

271140
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reactant: 721200
fast: false
reactant: 721188
product: 721224
notes: GENE_ASSOCIATION: b2836 PROTEIN_ASSOCIATION: Aas SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 2.3.1.40
reversible: false
kinetic law: 721260
product: 721236
product: 721248
name: R_2_acyl_glycerophospho_ethanolamine_acyltransferase__n_C180_
reactant: 721212

721200
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stoichiometry: 1.0
species: 241883

721188
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stoichiometry: 1.0
species: 234934

234934
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Acyl_sn_glycero_3_phosphoethanolamine__n_C180__C23H48NO7P1

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stoichiometry: 1.0
species: 240703

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species: 257942

257942
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_phosphatidylethanolamine__dioctadecanoyl__n_C180__C41H82N1O8P1

721248
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species: 259141

721212
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_octadecanoate__n_C180__C18H35O2

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Butyrate__n_C40__C4H7O2

289959
type: Reaction
notes: GENE_ASSOCIATION: b0404 PROTEIN_ASSOCIATION: AcpH SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 3.1.2.14
fast: false
product: 833559
reactant: 833547
name: R_fatty_acyl_ACP_hydrolase
kinetic law: 833595
reversible: false
product: 833583
product: 833571
reactant: 833535

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species: 238303

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species: 251222

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units: 716537
value: 0.0

833631
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value: 999999.0

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units: 716537
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initial amount: NaN
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name: M_Decanoate__n_C100__C10H19O2

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species: 244643

235774
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Isopropylmaleate_C7H8O4

306157
type: Reaction
kinetic law: 947418
product: 947406
reactant: 947394
notes: GENE_ASSOCIATION: b4025 PROTEIN_ASSOCIATION: Pgi SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 5.3.1.9
fast: false
reversible: true
name: R_glucose_6_phosphate_isomerase

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value: 0.0

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units: 716537
value: 4.488215

947454
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value: 0.0

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units: 716537
value: 999999.0

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units: 716537
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947406
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stoichiometry: 1.0
species: 246983

947394
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stoichiometry: 1.0
species: 248562

302318
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kinetic law: 916046
product: 916033
product: 916021
reactant: 916009
notes: GENE_ASSOCIATION: ( b4392 or b2813 or b2701 or b1193 or b2963 ) PROTEIN_ASSOCIATION: ( Slt ) or ( MltA ) or ( MltB ) or ( MltE ) or ( MltC ) SUBSYSTEM: S_Murein_Recycling PROTEIN_CLASS:
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reversible: false

916107
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916094
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units: 716537
value: 0.0

916082
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value: 0.0

916070
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units: 716537
value: 999999.0

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units: 716537
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stoichiometry: 1.0
species: 255542

916021
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species: 240823

240823
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tetrapeptide_C37H57N7O20

916009
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species: 255522

254722
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_L_methionine_R_sulfoxide_C5H11NO3S

246283
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_dTMP_C10H13N2O8P

293538
type: Reaction
notes: GENE_ASSOCIATION: b3648 PROTEIN_ASSOCIATION: Gmkec SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 2.7.4.8
reversible: true
fast: false
name: R_guanylate_kinase__GMPATP_
product: 859476
reactant: 859464
reactant: 859452
kinetic law: 859500
product: 859488

859476
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stoichiometry: 1.0
species: 239803

859464
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species: 250622

250622
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_GMP_C10H12N5O8P

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stoichiometry: 1.0
species: 241883

859561
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859548
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units: 716537
value: 0.179191

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859524
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859512
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units: 716537
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859488
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stoichiometry: 1.0
species: 249262

258981
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constant: false
boundary condition: false
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initial amount: NaN
in compartment: 233054

264541
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Xanthosine_C10H12N4O6

311337
type: Reaction
kinetic law: 980224
product: 980212
reactant: 980200
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_spermidine_transport_via_diffusion__extracellular_to_periplasm_

980286
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value: 0.0

980273
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units: 716537
value: 0.0

980261
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value: 0.0

980249
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units: 716537
value: 999999.0

980237
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units: 716537
value: -999999.0

980212
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stoichiometry: 1.0
species: 260721

260721
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Spermidine_C7H22N3

980200
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stoichiometry: 1.0
species: 260702

260702
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Spermidine_C7H22N3

283539
type: Reaction
kinetic law: 801315
product: 801303
product: 801290
reactant: 801278
notes: GENE_ASSOCIATION: b1851 PROTEIN_ASSOCIATION: Edd SUBSYSTEM: S_Pentose_Phosphate_Pathway PROTEIN_CLASS: 4.2.1.12
fast: false
reversible: false
name: R_6_phosphogluconate_dehydratase

801376
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value: -0.003009

801364
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units: 716537
value: 0.0

801351
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value: 0.0

801339
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value: 999999.0

801327
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units: 716537
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801303
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stoichiometry: 1.0
species: 251222

801290
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stoichiometry: 1.0
species: 235434

801278
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species: 238243

238243
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_6_Phospho_D_gluconate_C6H10O10P

276800
type: Reaction
reversible: false
product: 756129
kinetic law: 756153
fast: false
product: 756141
reactant: 756117
name: R_aerobactin_secretion__to_periplasm_
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
reactant: 756105

756129
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species: 251342

756213
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756201
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units: 716537
value: 0.0

756189
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value: 0.0

756177
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units: 716537
value: 999999.0

756165
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units: 716537
value: 0.0

756141
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stoichiometry: 1.0
species: 241424

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species: 251382

756105
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species: 241323

256942
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_octanoate__n_C80__C8H15O2

313457
type: Reaction
kinetic law: 996056
product: 996044
reactant: 996032
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
fast: false
reversible: false
name: R_undecaprenyl_phosphate_transport__cytoplasm_to_periplasm_

996116
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996104
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units: 716537
value: 0.0

996092
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996080
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units: 716537
value: 999999.0

996068
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units: 716537
value: 0.0

996044
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stoichiometry: 1.0
species: 263441

996032
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stoichiometry: 1.0
species: 263461

263461
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Undecaprenyl_phosphate_C55H89O4P

308957
type: Reaction
product: 965442
reactant: 965418
reversible: false
notes: GENE_ASSOCIATION: b4160 PROTEIN_ASSOCIATION: Psd SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 4.1.1.65
reactant: 965430
kinetic law: 965466
name: R_Phosphatidylserine_decarboxylase__n_C140_
product: 965454
fast: false

965442
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stoichiometry: 1.0
species: 243283

965418
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species: 251342

965430
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stoichiometry: 1.0
species: 259422

259422
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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965526
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965514
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value: 0.0

965502
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965490
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units: 716537
value: 999999.0

965478
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units: 716537
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species: 257782

311717
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reactant: 982552
product: 982576
product: 982600
reactant: 982564
kinetic law: 982612
notes: GENE_ASSOCIATION: ( b2763 and b2764 ) PROTEIN_ASSOCIATION: CysIJ SUBSYSTEM: S_Cysteine_Metabolism PROTEIN_CLASS: 1.8.2.2
reversible: false
name: R_sulfite_reductase__NADPH2_
product: 982588
reactant: 982540
fast: false

982552
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stoichiometry: 3.0
species: 256002

982576
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species: 251222

982600
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stoichiometry: 3.0
species: 255982

982564
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stoichiometry: 1.0
species: 260583

982672
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982660
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units: 716537
value: 0.181451

982648
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982636
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982624
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982588
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species: 251282

982540
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species: 251342

297258
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product: 882908
product: 882920
reversible: true
kinetic law: 882932
reactant: 882884
fast: false
notes: GENE_ASSOCIATION: ( b3940 or b0002 ) PROTEIN_ASSOCIATION: ( MetL ) or ( ThrA ) SUBSYSTEM: S_Threonine_and_Lysine_Metabolism PROTEIN_CLASS: 1.1.1.3
product: 882896
name: R_homoserine_dehydrogenase__NADPH_
reactant: 882871

882908
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species: 251342

882920
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stoichiometry: 1.0
species: 256002

882992
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882980
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units: 716537
value: -0.514308

882968
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value: 0.0

882956
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value: 999999.0

882944
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units: 716537
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882884
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species: 255982

882896
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species: 241823

882871
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stoichiometry: 1.0
species: 252002

252002
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Homoserine_C4H9NO3

281519
type: Reaction
reactant: 788832
reactant: 788808
kinetic law: 788880
name: R_1_4_dihydroxy_2_naphthoate_octaprenyltransferase
reversible: false
notes: GENE_ASSOCIATION: b3930 PROTEIN_ASSOCIATION: MenA SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
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product: 788856
fast: false
product: 788844
product: 788868

788832
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stoichiometry: 1.0
species: 256962

256962
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_all_trans_Octaprenyl_diphosphate_C40H65O7P2

788808
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species: 245343

245343
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_4_Dihydroxy_2_naphthoate_C11H7O4

788941
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value: -1.232282

788929
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units: 716537
value: 0.0

788916
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value: 0.0

788904
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units: 716537
value: 999999.0

788892
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units: 716537
value: 0.0

788820
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stoichiometry: 1.0
species: 251342

788856
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species: 243283

788844
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species: 235634

788868
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species: 259141

244683
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Decanoate__n_C100__C10H19O2

301758
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kinetic law: 910891
product: 910879
product: 910867
reactant: 910855
notes: GENE_ASSOCIATION: b2746 PROTEIN_ASSOCIATION: IspF SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_2_C_methyl_D_erythritol_2_4_cyclodiphosphate_synthase

910951
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value: 0.0

910939
type: LocalParameter
units: 716537
value: 0.00176

910927
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value: 0.0

910915
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units: 716537
value: 999999.0

910903
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units: 716537
value: 0.0

910879
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stoichiometry: 1.0
species: 243223

910867
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stoichiometry: 1.0
species: 235894

235894
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_C_methyl_D_erythritol_2_4_cyclodiphosphate_C5H10O9P2

910855
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stoichiometry: 1.0
species: 236134

236134
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boundary condition: false
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in compartment: 233054

286319
type: Reaction
kinetic law: 815099
product: 815087
reactant: 815075
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Fucose_exchange

815159
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value: -0.095292

815147
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units: 716537
value: 0.0

815135
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815123
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units: 716537
value: 999999.0

815111
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units: 716537
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815087
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stoichiometry: 1.0
species: 267301

815075
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stoichiometry: 1.0
species: 248263

248263
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Fucose_C6H12O5

260801
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_N2_Succinyl_L_arginine_C10H17N4O5

273100
type: Reaction
kinetic law: 733664
reactant: 733628
product: 733652
notes: GENE_ASSOCIATION: b2663 PROTEIN_ASSOCIATION: GabP SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
fast: false
name: R_4_aminobutyrate_transport_in_via_proton_symport__periplasm_
reversible: false
product: 733640
reactant: 733616

733724
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733712
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value: 0.0

733700
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733688
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733676
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733628
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733640
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733616
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species: 237684

237684
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_4_Aminobutanoate_C4H9NO2

291938
type: Reaction
kinetic law: 849466
product: 849454
reactant: 849441
reactant: 849429
notes: GENE_ASSOCIATION: ( b1612 or b4122 or b1611 ) PROTEIN_ASSOCIATION: ( FumA ) or ( FumB ) or ( FumCec ) SUBSYSTEM: S_Citric_Acid_Cycle PROTEIN_CLASS: 4.2.1.2
fast: false
reversible: true
name: R_fumarase

849527
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849515
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units: 716537
value: 4.495321

849503
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849491
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value: 999999.0

849478
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849454
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species: 253862

253862
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_L_Malate_C4H4O5

849441
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species: 251222

849429
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stoichiometry: 1.0
species: 248302

306237
type: Reaction
kinetic law: 947878
product: 947866
reactant: 947854
notes: GENE_ASSOCIATION: ( b3612 or b4395 or b0755 ) PROTEIN_ASSOCIATION: ( YibO ) or ( GpmB ) or ( GpmA ) SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 5.4.2.1
fast: false
reversible: true
name: R_phosphoglycerate_mutase

947938
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value: 0.0

947926
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units: 716537
value: -11.804143

947914
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value: 0.0

947902
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units: 716537
value: 999999.0

947890
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units: 716537
value: -999999.0

947866
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stoichiometry: 1.0
species: 237584

237584
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_3_Phospho_D_glycerate_C3H4O7P

947854
type: SpeciesReference
stoichiometry: 1.0
species: 236154

284979
type: Reaction
kinetic law: 808607
product: 808595
reactant: 808583
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_arsenite_exchange

808669
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808656
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units: 716537
value: 0.0

808644
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value: 0.0

808631
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units: 716537
value: 999999.0

808619
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units: 716537
value: 0.0

808595
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stoichiometry: 1.0
species: 265961

808583
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stoichiometry: 1.0
species: 241703

241703
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_arsenite_AsO3

280220
type: Reaction
reversible: false
name: R_Cyanide_sulfurtransferase__periplasmic_
product: 777824
reactant: 777800
fast: false
notes: GENE_ASSOCIATION: b1308 PROTEIN_ASSOCIATION: PspE SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS: 2.8.1.1
reactant: 777812
kinetic law: 777861
product: 777848
product: 777836

777824
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stoichiometry: 1.0
species: 251382

777800
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stoichiometry: 1.0
species: 244103

244103
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Hydrogen_cyanide_CHN

777812
type: SpeciesReference
stoichiometry: 1.0
species: 262721

262721
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Thiosulfate_O3S2

777921
type: LocalParameter
value: 0.0

777909
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units: 716537
value: 0.0

777897
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value: 0.0

777885
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units: 716537
value: 999999.0

777873
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units: 716537
value: 0.0

777848
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stoichiometry: 1.0
species: 261381

777836
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stoichiometry: 1.0
species: 260621

260621
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Sulfite_O3S

253482
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014

274960
type: Reaction
product: 744717
reversible: false
kinetic law: 744729
reactant: 744680
name: R_N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tetrapeptide_L_D_carboxypeptidase__periplasmic_
fast: false
reactant: 744692
product: 744705
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Murein_Recycling PROTEIN_CLASS:

744717
type: SpeciesReference
stoichiometry: 1.0
species: 240783

744789
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value: -0.001003

744777
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units: 716537
value: 0.0

744765
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value: 0.0

744753
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units: 716537
value: 999999.0

744741
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units: 716537
value: 0.0

744680
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stoichiometry: 1.0
species: 240823

744692
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stoichiometry: 1.0
species: 251262

744705
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stoichiometry: 1.0
species: 240263

242643
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

279100
type: Reaction
kinetic law: 770844
product: 770832
product: 770820
reactant: 770808
notes: GENE_ASSOCIATION: ( b1249 or b0789 ) PROTEIN_ASSOCIATION: ( Cls ) or ( YbhO ) SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS:
fast: false
reversible: true
name: R_cardiolipin_synthase__periplasmic__n_C141_

770904
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value: 0.0

770892
type: LocalParameter
units: 716537
value: 0.0

770880
type: LocalParameter
value: 0.0

770868
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units: 716537
value: 999999.0

770856
type: LocalParameter
units: 716537
value: -999999.0

770832
type: SpeciesReference
stoichiometry: 1.0
species: 250442

770820
type: SpeciesReference
stoichiometry: 1.0
species: 243123

243123
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_cardiolipin__tetratetradec_7_enoyl__n_C141__C65H116O17P2

770808
type: SpeciesReference
stoichiometry: 2.0
species: 258182

265801
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_AMP_C10H12N5O7P

233294
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_2_Diacyl_sn_glycerol__dioctadecanoyl__n_C180__C39H76O5

237524
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_3_Oxooctadecanoyl_CoA_C39H64N7O18P3S

235754
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_2_hexadecanoyl_sn_glycerol_3_phosphate_C19H38O7P1

305377
type: Reaction
reactant: 941990
fast: false
notes: GENE_ASSOCIATION: b1278 PROTEIN_ASSOCIATION: PgpB SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.3.4
reactant: 942002
kinetic law: 942039
product: 942014
product: 942026
reversible: false
name: R_Phosphatidate_phosphatase__n_C161_

941990
type: SpeciesReference
stoichiometry: 1.0
species: 251222

942002
type: SpeciesReference
stoichiometry: 1.0
species: 257422

942100
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value: -0.004012

942088
type: LocalParameter
units: 716537
value: 0.0

942076
type: LocalParameter
value: 0.0

942063
type: LocalParameter
units: 716537
value: 999999.0

942051
type: LocalParameter
units: 716537
value: 0.0

942014
type: SpeciesReference
stoichiometry: 1.0
species: 233254

233254
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_2_Diacyl_sn_glycerol__dihexadec_9_enoyl__n_C161__C35H64O5

942026
type: SpeciesReference
stoichiometry: 1.0
species: 258902

280699
type: Reaction
reactant: 781755
name: R_deoxyadenosine_transport_in_via_proton_symport__periplasm_
notes: GENE_ASSOCIATION: ( b2393 or b2964 ) PROTEIN_ASSOCIATION: ( NupCec ) or ( NupG ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
kinetic law: 781791
reversible: false
product: 781767
reactant: 781743
fast: false
product: 781779

781755
type: SpeciesReference
stoichiometry: 1.0
species: 251382

781852
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781839
type: LocalParameter
units: 716537
value: 0.0

781827
type: LocalParameter
value: 0.0

781815
type: LocalParameter
units: 716537
value: 999999.0

781803
type: LocalParameter
units: 716537
value: 0.0

781767
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stoichiometry: 1.0
species: 244403

244403
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Deoxyadenosine_C10H13N5O3

781743
type: SpeciesReference
stoichiometry: 1.0
species: 244443

781779
type: SpeciesReference
stoichiometry: 1.0
species: 251342

303718
type: Reaction
reactant: 930113
notes: GENE_ASSOCIATION: ( b4055 or b0480 ) PROTEIN_ASSOCIATION: ( AphA ) or ( UshA ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.3.5
fast: false
reactant: 930101
product: 930137
kinetic law: 930150
reversible: false
name: R_5__nucleotidase__dAMP_
product: 930125

930113
type: SpeciesReference
stoichiometry: 1.0
species: 251262

930101
type: SpeciesReference
stoichiometry: 1.0
species: 244543

930137
type: SpeciesReference
stoichiometry: 1.0
species: 258942

930210
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930198
type: LocalParameter
units: 716537
value: 0.0

930186
type: LocalParameter
value: 0.0

930174
type: LocalParameter
units: 716537
value: 999999.0

930162
type: LocalParameter
units: 716537
value: 0.0

930125
type: SpeciesReference
stoichiometry: 1.0
species: 244443

278540
type: Reaction
reactant: 767355
fast: false
notes: GENE_ASSOCIATION: b3918 PROTEIN_ASSOCIATION: Cdh SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.6.1.26
product: 767379
reactant: 767367
reversible: false
product: 767391
kinetic law: 767416
name: R_CDP_Diacylglycerol_pyrophostatase__n_C181_
product: 767403

767355
type: SpeciesReference
stoichiometry: 1.0
species: 242643

767379
type: SpeciesReference
stoichiometry: 1.0
species: 243223

767367
type: SpeciesReference
stoichiometry: 1.0
species: 251222

767391
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stoichiometry: 2.0
species: 251342

767476
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767464
type: LocalParameter
units: 716537
value: 0.0

767452
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value: 0.0

767440
type: LocalParameter
units: 716537
value: 999999.0

767428
type: LocalParameter
units: 716537
value: 0.0

767403
type: SpeciesReference
stoichiometry: 1.0
species: 257502

257502
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_2_dioctadec_11_enoyl_sn_glycerol_3_phosphate_C39H71O8P1

273960
type: Reaction
fast: false
reactant: 738681
notes: GENE_ASSOCIATION: b0221 PROTEIN_ASSOCIATION: FadE SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.3.99.3
reversible: true
product: 738694
reactant: 738668
kinetic law: 738720
name: R_acyl_CoA_dehydrogenase__octadecanoyl_CoA_
product: 738707

738681
type: SpeciesReference
stoichiometry: 1.0
species: 260761

260761
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054

738694
type: SpeciesReference
stoichiometry: 1.0
species: 247063

738668
type: SpeciesReference
stoichiometry: 1.0
species: 247043

738781
type: LocalParameter
value: 0.0

738769
type: LocalParameter
units: 716537
value: 0.0

738757
type: LocalParameter
value: 0.0

738745
type: LocalParameter
units: 716537
value: 999999.0

738733
type: LocalParameter
units: 716537
value: -999999.0

738707
type: SpeciesReference
stoichiometry: 1.0
species: 257002

269561
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Oxamate_C2H2NO3

270260
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Xanthine_C5H4N4O2

313037
type: Reaction
kinetic law: 991936
product: 991924
reactant: 991912
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_tryptophan_transport_via_diffusion__extracellular_to_periplasm_

991996
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value: 0.0

991984
type: LocalParameter
units: 716537
value: 0.0

991972
type: LocalParameter
value: 0.0

991960
type: LocalParameter
units: 716537
value: 999999.0

991948
type: LocalParameter
units: 716537
value: -999999.0

991924
type: SpeciesReference
stoichiometry: 1.0
species: 262641

991912
type: SpeciesReference
stoichiometry: 1.0
species: 262621

262621
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Tryptophan_C11H12N2O2

306657
type: Reaction
reversible: false
product: 950766
notes: GENE_ASSOCIATION: ( b0418 or b1278 ) PROTEIN_ASSOCIATION: ( PgpA ) or ( PgpB ) SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.3.27
kinetic law: 950778
fast: false
name: R_phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C181_
reactant: 950742
reactant: 950730
product: 950754

950766
type: SpeciesReference
stoichiometry: 1.0
species: 258942

950838
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value: 0.0

950826
type: LocalParameter
units: 716537
value: 0.0

950814
type: LocalParameter
value: 0.0

950802
type: LocalParameter
units: 716537
value: 999999.0

950790
type: LocalParameter
units: 716537
value: 0.0

950742
type: SpeciesReference
stoichiometry: 1.0
species: 258622

258622
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Phosphatidylglycerophosphate__dioctadec_11_enoyl__n_C181__C42H77O13P2

950730
type: SpeciesReference
stoichiometry: 1.0
species: 251262

950754
type: SpeciesReference
stoichiometry: 1.0
species: 258342

303817
type: Reaction
reversible: false
name: R_5__nucleotidase__GMP_
product: 930859
reactant: 930835
reactant: 930823
kinetic law: 930871
notes: GENE_ASSOCIATION: ( b4055 or b0480 ) PROTEIN_ASSOCIATION: ( AphA ) or ( UshA ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.3.5
product: 930847
fast: false

930859
type: SpeciesReference
stoichiometry: 1.0
species: 258942

930835
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stoichiometry: 1.0
species: 251262

930823
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species: 250662