MODEL1209060000
type: SBMLModel
reaction: 988275
species: 910700
species: 892833
species: 900657
reaction: 926999
species: 906356
reaction: 935508
species: 917466
species: 904304
species: 918992
species: 906752
species: 895677
species: 904280
species: 898773
species: 918547
species: 907412
species: 907028
reaction: 939107
species: 892083
species: 914767
reaction: 940679
species: 903356
species: 891142
reaction: 928799
species: 915019
species: 910556
species: 897717
reaction: 975281
reaction: 920052
reaction: 923338
species: 916026
species: 910748
species: 900165
species: 897129
species: 892917
species: 891275
species: 918282
species: 893504
species: 901701
reaction: 943462
species: 913723
species: 904700
species: 896721
species: 905252
reaction: 920288
species: 904892
species: 909416
reaction: 946764
species: 903308
species: 899421
species: 909860
reaction: 998877
reaction: 968690
species: 911600
species: 913027
species: 913663
reaction: 996046
reaction: 004649
reaction: 950992
reaction: 977560
species: 908468
species: 898665
species: 916143
species: 911012
reaction: 943546
species: 915115
species: 900561
species: 911696
species: 898857
species: 912727
species: 916702
reaction: 955983
species: 895269
reaction: 967190
species: 917370
reaction: 962775
reaction: 989211
species: 918451
reaction: 969674

988275
type: Reaction
is: SBO:0000176
modifier: meta s 2237 b r 0931
modifier: meta s 2239 b r 0931
reversible: true
product: 988335
product: 988311
fast: false
notes: GENE_ASSOCIATION:(YNL106C or YOR109W)
reactant: 988299
product: 988323
reactant: 988287
name: polyphosphatidylinositol phosphatase

912775
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: INP52 [cell envelope]

meta c 02
type: Compartment
is: GO:0030313
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: cell envelope

912799
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: INP53 [cell envelope]

988335
type: SpeciesReference
stoichiometry: 1.0
species: 904256

904256
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: phosphate [cytoplasm]

meta c 03
type: Compartment
is: GO:0005737
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: cytoplasm

988311
type: SpeciesReference
stoichiometry: 1.0
species: 891842

891842
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: 1-phosphatidyl-1D-myo-inositol 3-phosphate [cell envelope]

988299
type: SpeciesReference
stoichiometry: 1.0
species: 899145

899145
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: H2O [cytoplasm]

988323
type: SpeciesReference
stoichiometry: 2.0
species: 899025

899025
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: H+ [cell envelope]

988287
type: SpeciesReference
stoichiometry: 1.0
species: 891781

891781
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate [cell envelope]

910700
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: FAB1 [cell envelope]

892833
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3',5'-cyclic dAMP [cytoplasm]

900657
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: keto-phenylpyruvate [cytoplasm]

926999
type: Reaction
modifier: meta s 1840 b r 0112
reactant: 927011
is: SBO:0000176
product: 927047
modifier: meta s 1842 b r 0112
reactant: 927035
notes: GENE_ASSOCIATION:(YAL054C or YLR153C)
reversible: true
fast: false
reactant: 927023
product: 927059
name: acetyl-CoA synthetase
product: 927071

908012
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ACS1 [cytoplasm]

927011
type: SpeciesReference
stoichiometry: 1.0
species: 894488

894488
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: acetate [cytoplasm]

927047
type: SpeciesReference
stoichiometry: 1.0
species: 894597

894597
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: acetyl-CoA [cytoplasm]

908036
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ACS2 [cytoplasm]

927035
type: SpeciesReference
stoichiometry: 1.0
species: 896313

896313
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: coenzyme A [cytoplasm]

927023
type: SpeciesReference
stoichiometry: 1.0
species: 895269

895269
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ATP [cytoplasm]

927059
type: SpeciesReference
stoichiometry: 1.0
species: 895137

895137
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: AMP [cytoplasm]

927071
type: SpeciesReference
stoichiometry: 1.0
species: 897369

897369
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: diphosphate [cytoplasm]

906356
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: Trp-tRNA(Trp) [cytoplasm]

935508
type: Reaction
modifier: 935568
product: 935544
name: biotin synthase
is: SBO:0000176
fast: false
product: 935556
notes: GENE_ASSOCIATION:YGR286C
reversible: true
reactant: 935532
reactant: 935520

909200
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: BIO2 [cytoplasm]

935544
type: SpeciesReference
stoichiometry: 1.0
species: 895425

895425
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: biotin [cytoplasm]

935556
type: SpeciesReference
stoichiometry: 2.0
species: 899037

899037
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: H+ [cytoplasm]

935532
type: SpeciesReference
stoichiometry: 1.0
species: 904796

904796
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: polysulphur [cytoplasm]

935520
type: SpeciesReference
stoichiometry: 1.0
species: 897117

897117
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dethiobiotin [cytoplasm]

917466
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: YAT1 [cytoplasm]

904304
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: phosphate [mitochondrion]

meta c 11
type: Compartment
is: GO:0005739
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: mitochondrion

918992
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: RNR3:RNR4 [cytoplasm]

906752
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: Val-tRNA(Val) [mitochondrion]

895677
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CDP-ethanolamine [cytoplasm]

904280
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: phosphate [extracellular]

meta c 06
type: Compartment
is: GO:0005576
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: extracellular

898773
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: glycerol 3-phosphate [endoplasmic reticulum]

meta c 04
type: Compartment
is: GO:0005783
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: endoplasmic reticulum

918547
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GLR1:GRX3 [cytoplasm]

907412
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: YLR043C disulphide [cytoplasm]

907028
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: tRNA(Asp), mitchondrial [mitochondrion]

939107
type: Reaction
name: choline phosphate cytididyltransferase
reactant: 939131
fast: false
reversible: true
reactant: 939143
product: 939167
notes: GENE_ASSOCIATION:YGR202C
modifier: 939179
product: 939155
is: SBO:0000176
reactant: 939119

939131
type: SpeciesReference
stoichiometry: 1.0
species: 896397

896397
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CTP [cytoplasm]

939143
type: SpeciesReference
stoichiometry: 1.0
species: 899037

939167
type: SpeciesReference
stoichiometry: 1.0
species: 897369

914395
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PCT1 [cytoplasm]

939155
type: SpeciesReference
stoichiometry: 1.0
species: 895617

895617
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CDP-choline [cytoplasm]

939119
type: SpeciesReference
stoichiometry: 1.0
species: 896145

896145
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: choline phosphate [cytoplasm]

892083
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 10-formyl-THF [cytoplasm]

914767
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: PHO89 [cell envelope]

940679
type: Reaction
product: 940751
is: SBO:0000176
product: 940739
product: 940727
fast: false
name: citrate synthase
modifier: meta s 1983 b r 0300
reactant: 940703
reactant: 940691
reversible: true
modifier: meta s 1981 b r 0300
notes: GENE_ASSOCIATION:(YNR001C or YPR001W)
reactant: 940715

940751
type: SpeciesReference
stoichiometry: 1.0
species: 899097

899097
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: H+ [mitochondrion]

940739
type: SpeciesReference
stoichiometry: 1.0
species: 896349

896349
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: coenzyme A [mitochondrion]

940727
type: SpeciesReference
stoichiometry: 1.0
species: 896253

896253
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: citrate(3-) [mitochondrion]

909728
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: CIT3 [mitochondrion]

940703
type: SpeciesReference
stoichiometry: 1.0
species: 899193

899193
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: H2O [mitochondrion]

940691
type: SpeciesReference
stoichiometry: 1.0
species: 894609

894609
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: acetyl-CoA [mitochondrion]

909704
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: CIT1 [mitochondrion]

940715
type: SpeciesReference
stoichiometry: 1.0
species: 903824

903824
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: oxaloacetate(2-) [mitochondrion]

903356
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: nicotinic acid D-ribonucleotide [cytoplasm]

891142
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (R)-pantoate [cytoplasm]

928799
type: Reaction
fast: false
notes: GENE_ASSOCIATION:YML022W
reversible: true
product: 928835
reactant: 928811
reactant: 928823
modifier: meta s 1891 b r 0139
is: SBO:0000176
name: adenine phosphoribosyltransferase
product: 928847

928835
type: SpeciesReference
stoichiometry: 1.0
species: 895137

928811
type: SpeciesReference
stoichiometry: 1.0
species: 894693

894693
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: adenine [cytoplasm]

928823
type: SpeciesReference
stoichiometry: 1.0
species: 904952

904952
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PRPP [cytoplasm]

908624
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: APT1 [cytoplasm]

928847
type: SpeciesReference
stoichiometry: 1.0
species: 897369

915019
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PNP1 [cytoplasm]

910556
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ERG4 [endoplasmic reticulum]

897717
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ergosta-5,7,24(28)-trien-3beta-ol [cytoplasm]

975281
type: Reaction
fast: false
reactant: 975293
modifier: meta s 2223 b r 0741
is: SBO:0000176
product: 975329
notes: GENE_ASSOCIATION:YBR159W
reactant: 975305
reversible: true
product: 975341
name: microsomal beta-keto-reductase
reactant: 975317

975293
type: SpeciesReference
stoichiometry: 1.0
species: 893276

893276
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 3-oxodocosanoyl-CoA [endoplasmic reticulum]

912607
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: IFA38 [endoplasmic reticulum]

975329
type: SpeciesReference
stoichiometry: 1.0
species: 893144

893144
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 3-hydroxydocosanoyl-CoA [endoplasmic reticulum]

975305
type: SpeciesReference
stoichiometry: 1.0
species: 899049

899049
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: H+ [endoplasmic reticulum]

975341
type: SpeciesReference
stoichiometry: 1.0
species: 903200

903200
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: NADP(+) [endoplasmic reticulum]

975317
type: SpeciesReference
stoichiometry: 1.0
species: 903248

903248
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: NADPH [endoplasmic reticulum]

920052
type: Reaction
product: 920102
reversible: true
notes: GENE_ASSOCIATION:(YEL038W and YMR009W)
modifier: meta s 2650 b r 0013
product: 920089
reactant: 920077
product: 920127
is: SBO:0000176
fast: false
name: 2,3-diketo-5-methylthio-1-phosphopentane degradation reaction
reactant: 920065
product: 920115

920102
type: SpeciesReference
stoichiometry: 1.0
species: 898353

898353
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: formate [cytoplasm]

917826
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADI1:UTR4 [cytoplasm]

920089
type: SpeciesReference
stoichiometry: 1.0
species: 893768

893768
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 4-methylthio-2-oxobutanoate [cytoplasm]

920077
type: SpeciesReference
stoichiometry: 3.0
species: 899145

920127
type: SpeciesReference
stoichiometry: 1.0
species: 904256

920065
type: SpeciesReference
stoichiometry: 1.0
species: 893972

893972
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5-(methylsulfanyl)-2,3-dioxopentyl phosphate [cytoplasm]

920115
type: SpeciesReference
stoichiometry: 6.0
species: 899037

923338
type: Reaction
product: 923374
reactant: 923350
name: 3-isopropylmalate dehydratase
is: SBO:0000176
notes: GENE_ASSOCIATION:YGL009C
reversible: true
modifier: meta s 2271 b r 0060
fast: false
product: 923362

923374
type: SpeciesReference
stoichiometry: 1.0
species: 899145

923350
type: SpeciesReference
stoichiometry: 1.0
species: 890888

890888
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (2R,3S)-3-isopropylmalate [cytoplasm]

913183
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: LEU1 [cytoplasm]

923362
type: SpeciesReference
stoichiometry: 1.0
species: 892530

892530
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-isopropylmaleic acid [cytoplasm]

916026
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: SIR2 [nucleus]

meta c 13
type: Compartment
is: GO:0005634
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: nucleus

910748
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: FAT1 [peroxisome]

meta c 15
type: Compartment
is: GO:0005777
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: peroxisome

900165
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: inositol-P-ceramide B (C26) [mitochondrion]

897129
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dGDP [cytoplasm]

892917
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3-(4-hydroxyphenyl)pyruvate [cytoplasm]

891275
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: (S)-3-hydroxyhexacosanoyl-CoA [endoplasmic reticulum]

918282
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: DIT2:NCP1 [cytoplasm]

893504
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 4-amino-2-methyl-5-diphosphomethylpyrimidine [cytoplasm]

901701
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: L-threonine [extracellular]

943462
type: Reaction
product: 943510
reactant: 943474
product: 943498
modifier: 943534
product: 943522
name: dephospho-CoA kinase
notes: GENE_ASSOCIATION:YDR196C
is: SBO:0000176
reactant: 943486
fast: false
reversible: true

943510
type: SpeciesReference
stoichiometry: 1.0
species: 896349

943474
type: SpeciesReference
stoichiometry: 1.0
species: 892881

892881
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 3'-dephospho-CoA [mitochondrion]

943498
type: SpeciesReference
stoichiometry: 1.0
species: 894849

894849
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ADP [mitochondrion]

909440
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: CAB5 [mitochondrion]

943522
type: SpeciesReference
stoichiometry: 1.0
species: 899097

943486
type: SpeciesReference
stoichiometry: 1.0
species: 895305

895305
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ATP [mitochondrion]

913723
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MHT1 [cytoplasm]

904700
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: phosphoenolpyruvate [mitochondrion]

896721
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: D-glucose 6-phosphate [cytoplasm]

905252
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: S-adenosyl-4-methylthio-2-oxobutanoate [cytoplasm]

920288
type: Reaction
reactant: 920324
modifier: meta s 2716 b r 0016
reactant: 920300
fast: false
product: 920337
is: SBO:0000176
name: 2-aceto-2-hydroxybutanoate synthase
reversible: true
product: 920350
notes: GENE_ASSOCIATION:(YCL009C and YMR108W)
reactant: 920312

920324
type: SpeciesReference
stoichiometry: 1.0
species: 905132

905132
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: pyruvate [mitochondrion]

918619
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ILV2:ILV6 [mitochondrion]

920300
type: SpeciesReference
stoichiometry: 1.0
species: 892677

892677
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 2-oxobutanoate [mitochondrion]

920337
type: SpeciesReference
stoichiometry: 1.0
species: 891251

891251
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: (S)-2-acetyl-2-hydroxybutanoate [mitochondrion]

920350
type: SpeciesReference
stoichiometry: 1.0
species: 895521

895521
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: carbon dioxide [mitochondrion]

920312
type: SpeciesReference
stoichiometry: 1.0
species: 899097

904892
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: Pro-tRNA(Pro) [cytoplasm]

909416
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CAB3 [cytoplasm]

946764
type: Reaction
notes: GENE_ASSOCIATION:((YGL205W and YIL160C and YKR009C and YLR284C) or (YGL205W and YIL160C and YKR009C and YOR180C))
product: 946839
product: 946877
reversible: true
modifier: meta s 2686 b r 0378
fast: false
product: 946864
reactant: 946789
name: fatty acid oxidation
product: 946852
reactant: 946802
reactant: 946814
is: SBO:0000176
reactant: 946776
modifier: meta s 2691 b r 0378
reactant: 946827

946839
type: SpeciesReference
stoichiometry: 9.0
species: 894633

894633
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: acetyl-CoA [peroxisome]

946877
type: SpeciesReference
stoichiometry: 8.0
species: 903176

903176
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: NADH [peroxisome]

918258
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: DCI1:FOX2:POT1:POX1 [peroxisome]

946864
type: SpeciesReference
stoichiometry: 7.0
species: 899493

899493
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: hydrogen peroxide [peroxisome]

946789
type: SpeciesReference
stoichiometry: 8.0
species: 899217

899217
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: H2O [peroxisome]

946852
type: SpeciesReference
stoichiometry: 8.0
species: 899121

899121
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: H+ [peroxisome]

946802
type: SpeciesReference
stoichiometry: 8.0
species: 903128

903128
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: NAD [peroxisome]

946814
type: SpeciesReference
stoichiometry: 1.0
species: 903740

903740
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: oleoyl-CoA [peroxisome]

946776
type: SpeciesReference
stoichiometry: 8.0
species: 896373

896373
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: coenzyme A [peroxisome]

918318
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: ECI1:FOX2:POT1:POX1 [peroxisome]

946827
type: SpeciesReference
stoichiometry: 7.0
species: 903884

903884
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: oxygen [peroxisome]

903308
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: nicotinamide ribose [cytoplasm]

899421
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: homocitrate(3-) [mitochondrion]

909860
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CTT1 [cytoplasm]

998877
type: Reaction
is: SBO:0000176
fast: false
reversible: true
reactant: 998889
reactant: 998901
modifier: meta s 1913 b r 1063
notes: GENE_ASSOCIATION:(YGL202W or YHR137W)
product: 998925
name: tyrosine transaminase
modifier: meta s 1914 b r 1063
product: 998913

998889
type: SpeciesReference
stoichiometry: 1.0
species: 892917

998901
type: SpeciesReference
stoichiometry: 1.0
species: 901101

901101
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-glutamate [cytoplasm]

908888
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ARO8 [cytoplasm]

998925
type: SpeciesReference
stoichiometry: 1.0
species: 901761

901761
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-tyrosine [cytoplasm]

908900
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ARO9 [cytoplasm]

998913
type: SpeciesReference
stoichiometry: 1.0
species: 892689

892689
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-oxoglutarate [cytoplasm]

968690
type: Reaction
fast: false
notes: GENE_ASSOCIATION:YER019W
reactant: 968702
name: IPS phospholipase C
modifier: meta s 2245 b r 0650
product: 968738
product: 968726
reactant: 968714
is: SBO:0000176
reversible: true

968702
type: SpeciesReference
stoichiometry: 1.0
species: 899157

899157
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: H2O [endoplasmic reticulum]

912871
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ISC1 [endoplasmic reticulum]

968738
type: SpeciesReference
stoichiometry: 1.0
species: 895761

895761
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ceramide-2 (C24) [endoplasmic reticulum]

968726
type: SpeciesReference
stoichiometry: 1.0
species: 892168

892168
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 1D-myo-inositol 1-phosphate [endoplasmic reticulum]

968714
type: SpeciesReference
stoichiometry: 1.0
species: 900105

900105
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: inositol-P-ceramide B (C24) [endoplasmic reticulum]

911600
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: GPT2 [lipid particle]

meta c 09
type: Compartment
is: GO:0005811
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: lipid particle

913027
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: KRS1 [cytoplasm]

913663
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MET5 [cytoplasm]

996046
type: Reaction
reactant: 996058
name: sucrose hydrolyzing enxyme
is: SBO:0000176
modifier: 996106
reversible: true
reactant: 996070
product: 996082
product: 996094
notes: GENE_ASSOCIATION:YIL162W
fast: false

996058
type: SpeciesReference
stoichiometry: 1.0
species: 899169

899169
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: H2O [extracellular]

916338
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: SUC2 [extracellular]

996070
type: SpeciesReference
stoichiometry: 1.0
species: 905804

905804
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: sucrose [extracellular]

996082
type: SpeciesReference
stoichiometry: 1.0
species: 896565

896565
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: D-fructose [extracellular]

996094
type: SpeciesReference
stoichiometry: 1.0
species: 896685

896685
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: D-glucose [extracellular]

004649
type: Reaction
modifier: meta s 2020 b r 1145
product: 004673
reactant: 004661
notes: GENE_ASSOCIATION:YMR162C
is: SBO:0000185
fast: false
reversible: true
name: DNF3 flippase

910172
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 08
name: DNF3 [Golgi membrane]

meta c 08
type: Compartment
is: GO:0000139
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: Golgi membrane

004673
type: SpeciesReference
stoichiometry: 1.0
species: 904412

904412
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: phosphatidyl-L-serine [cytoplasm]

004661
type: SpeciesReference
stoichiometry: 1.0
species: 904436

904436
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: phosphatidyl-L-serine [Golgi]

meta c 07
type: Compartment
is: GO:0005794
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: Golgi

950992
type: Reaction
product: 951064
fast: false
reactant: 951004
is: SBO:0000176
modifier: 951076
reactant: 951016
product: 951052
modifier: 951088
name: fatty-acid--CoA ligase (tetradecenoate)
notes: GENE_ASSOCIATION:(YIL009W or YMR246W or YOR317W)
modifier: 951100
reactant: 951028
product: 951040
reversible: true

951064
type: SpeciesReference
stoichiometry: 1.0
species: 905996

905996
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: tetradecenoyl-CoA [cytoplasm]

951004
type: SpeciesReference
stoichiometry: 1.0
species: 895269

910652
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FAA1 [cytoplasm]

951016
type: SpeciesReference
stoichiometry: 1.0
species: 896313

951052
type: SpeciesReference
stoichiometry: 1.0
species: 897369

910676
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FAA3 [cytoplasm]

910688
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FAA4 [cytoplasm]

951028
type: SpeciesReference
stoichiometry: 1.0
species: 902793

902793
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: myristoleate [cytoplasm]

951040
type: SpeciesReference
stoichiometry: 1.0
species: 895137

977560
type: Reaction
reactant: 977572
fast: false
notes: GENE_ASSOCIATION:YML120C
is: SBO:0000176
product: 977632
reversible: true
reactant: 977584
reactant: 977596
product: 977620
product: 977608
modifier: 977644
name: NADH:ubiquinone oxidoreductase

977572
type: SpeciesReference
stoichiometry: 2.5
species: 899097

977632
type: SpeciesReference
stoichiometry: 1.0
species: 906440

906440
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ubiquinol-6 [mitochondrion]

977584
type: SpeciesReference
stoichiometry: 1.0
species: 903164

903164
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: NADH [mitochondrion]

977596
type: SpeciesReference
stoichiometry: 1.0
species: 906452

906452
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ubiquinone-6 [mitochondrion]

977620
type: SpeciesReference
stoichiometry: 1.0
species: 903104

903104
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: NAD [mitochondrion]

977608
type: SpeciesReference
stoichiometry: 1.5
species: 899037

914035
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: NDI1 [mitochondrial membrane]

meta c 10
type: Compartment
is: GO:0031966
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: mitochondrial membrane

908468
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ALD4 [mitochondrion]

898665
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: glycan G00008 [endoplasmic reticulum]

916143
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SOR1 [cytoplasm]

911012
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FOL3 [cytoplasm]

943546
type: Reaction
modifier: 943642
reactant: 943558
fast: false
reactant: 943582
reactant: 943570
product: 943606
notes: GENE_ASSOCIATION:YNR057C
product: 943618
is: SBO:0000176
name: dethiobiotin synthase
product: 943594
product: 943630
reversible: true

909224
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: BIO4 [cytoplasm]

943558
type: SpeciesReference
stoichiometry: 1.0
species: 894320

894320
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 7,8-diaminononanoate [cytoplasm]

943582
type: SpeciesReference
stoichiometry: 1.0
species: 895485

895485
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: carbon dioxide [cytoplasm]

943570
type: SpeciesReference
stoichiometry: 1.0
species: 895269

943606
type: SpeciesReference
stoichiometry: 1.0
species: 897117

943618
type: SpeciesReference
stoichiometry: 3.0
species: 899037

943594
type: SpeciesReference
stoichiometry: 1.0
species: 894813

894813
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADP [cytoplasm]

943630
type: SpeciesReference
stoichiometry: 1.0
species: 904256

915115
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PRO2 [cytoplasm]

900561
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: isocitrate(3-) [mitochondrion]

911696
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GRX2 [cytoplasm]

898857
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: glycolaldehyde [mitochondrion]

912727
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: INM2 [cytoplasm]

916702
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: THR1 [cytoplasm]

955983
type: Reaction
reactant: 956019
product: 956043
fast: false
reactant: 955995
modifier: meta s 2110 b r 0470
reactant: 956007
product: 956067
reversible: true
notes: GENE_ASSOCIATION:YDL215C
product: 956031
name: glutamate dehydrogenase (NAD)
is: SBO:0000176
product: 956055

956019
type: SpeciesReference
stoichiometry: 1.0
species: 903080

903080
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: NAD [cytoplasm]

956043
type: SpeciesReference
stoichiometry: 1.0
species: 895089

895089
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ammonium [cytoplasm]

955995
type: SpeciesReference
stoichiometry: 1.0
species: 899145

911252
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GDH2 [cytoplasm]

956007
type: SpeciesReference
stoichiometry: 1.0
species: 901101

956067
type: SpeciesReference
stoichiometry: 1.0
species: 903140

903140
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: NADH [cytoplasm]

956031
type: SpeciesReference
stoichiometry: 1.0
species: 892689

956055
type: SpeciesReference
stoichiometry: 1.0
species: 899037

967190
type: Reaction
modifier: meta s 2246 b r 0625
is: SBO:0000176
fast: false
reactant: 967202
reactant: 967214
product: 967238
name: IPS phospholipase C
reversible: true
product: 967226
notes: GENE_ASSOCIATION:YER019W

912883
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ISC1 [mitochondrion]

967202
type: SpeciesReference
stoichiometry: 1.0
species: 899193

967214
type: SpeciesReference
stoichiometry: 1.0
species: 900381

900381
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: inositol-P-ceramide D (C26) [mitochondrion]

967238
type: SpeciesReference
stoichiometry: 1.0
species: 896037

896037
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ceramide-4 (C26) [mitochondrion]

967226
type: SpeciesReference
stoichiometry: 1.0
species: 892180

892180
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 1D-myo-inositol 3-phosphate [mitochondrion]

917370
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: VHT1 [cell envelope]

962775
type: Reaction
notes: GENE_ASSOCIATION:YDL205C
product: 962811
is: SBO:0000176
reversible: true
modifier: 962835
reactant: 962787
name: hydroxymethylbilane synthase
product: 962823
fast: false
reactant: 962799

962811
type: SpeciesReference
stoichiometry: 4.0
species: 895089

911936
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HEM3 [cytoplasm]

962787
type: SpeciesReference
stoichiometry: 1.0
species: 899145

962823
type: SpeciesReference
stoichiometry: 1.0
species: 904880

904880
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: preuroporphyrinogen [cytoplasm]

962799
type: SpeciesReference
stoichiometry: 4.0
species: 904808

904808
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: porphobilinogen [cytoplasm]

989211
type: Reaction
reversible: true
is: SBO:0000176
product: 989247
reactant: 989223
modifier: meta s 2728 b r 0943
product: 989271
notes: GENE_ASSOCIATION:(YDR400W and YLR017W and YLR209C)
product: 989259
fast: false
name: purine-nucleoside phosphorylase
reactant: 989235

989247
type: SpeciesReference
stoichiometry: 1.0
species: 895041

895041
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: alpha-D-ribose 1-phosphate [cytoplasm]

989223
type: SpeciesReference
stoichiometry: 1.0
species: 903308

918763
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MEU1:PNP1:URH1 [cytoplasm]

989271
type: SpeciesReference
stoichiometry: 1.0
species: 903284

903284
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: nicotinamide [cytoplasm]

989259
type: SpeciesReference
stoichiometry: 1.0
species: 899037

989235
type: SpeciesReference
stoichiometry: 1.0
species: 904256

918451
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: GCV1:GCV2:GCV3:LPD1 [mitochondrion]

969674
type: Reaction
reactant: 969686
product: 969746
product: 969722
reversible: true
fast: false
modifier: meta s 2224 b r 0665
name: isoleucyl-tRNA synthetase
reactant: 969710
notes: GENE_ASSOCIATION:YBL076C
product: 969734
is: SBO:0000176
reactant: 969698

969686
type: SpeciesReference
stoichiometry: 1.0
species: 895269

969746
type: SpeciesReference
stoichiometry: 1.0
species: 899565

899565
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: Ile-tRNA(Ile) [cytoplasm]

969722
type: SpeciesReference
stoichiometry: 1.0
species: 895137

912619
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ILS1 [cytoplasm]

969710
type: SpeciesReference
stoichiometry: 1.0
species: 907124

907124
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: tRNA(Ile), cytoplasmic [cytoplasm]

969734
type: SpeciesReference
stoichiometry: 1.0
species: 897369

969698
type: SpeciesReference
stoichiometry: 1.0
species: 901353

901353
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-isoleucine [cytoplasm]

955288
type: Reaction
modifier: 955360
name: galactose-1-phosphate uridylyltransferase
reversible: true
notes: GENE_ASSOCIATION:YBR018C
reactant: 955312
reactant: 955324
product: 955348
product: 955336
fast: false
reactant: 955300
is: SBO:0000176

911168
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GAL7 [cytoplasm]

955312
type: SpeciesReference
stoichiometry: 1.0
species: 899037

955324
type: SpeciesReference
stoichiometry: 1.0
species: 906716

906716
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: UTP [cytoplasm]

955348
type: SpeciesReference
stoichiometry: 1.0
species: 906500

906500
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: UDP-D-galactose [cytoplasm]

955336
type: SpeciesReference
stoichiometry: 1.0
species: 897369

955300
type: SpeciesReference
stoichiometry: 1.0
species: 894993

894993
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: alpha-D-galactose 1-phosphate [cytoplasm]

902145
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: Lys-tRNA(Lys) [mitochondrion]

931534
type: Reaction
is: SBO:0000176
reactant: 931570
reactant: 931546
product: 931594
fast: false
notes: GENE_ASSOCIATION:YPL061W
reactant: 931558
name: aldehyde dehydrogenase (indole-3-acetaldehyde, NADP)
reversible: true
product: 931582
modifier: 931620
product: 931606

931570
type: SpeciesReference
stoichiometry: 1.0
species: 903188

903188
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: NADP(+) [cytoplasm]

931546
type: SpeciesReference
stoichiometry: 1.0
species: 899145

931594
type: SpeciesReference
stoichiometry: 1.0
species: 899625

899625
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: indole-3-acetate [cytoplasm]

931558
type: SpeciesReference
stoichiometry: 1.0
species: 899601

899601
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: indol-3-ylacetaldehyde [cytoplasm]

931582
type: SpeciesReference
stoichiometry: 2.0
species: 899037

908492
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ALD6 [cytoplasm]

931606
type: SpeciesReference
stoichiometry: 1.0
species: 903236

903236
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: NADPH [cytoplasm]

951112
type: Reaction
reactant: 951148
modifier: 951196
product: 951184
fast: false
reactant: 951136
notes: GENE_ASSOCIATION:YER015W
name: fatty-acid--CoA ligase (tetradecenoate)
reversible: true
is: SBO:0000176
product: 951160
reactant: 951124
product: 951172

951148
type: SpeciesReference
stoichiometry: 1.0
species: 902805

902805
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: myristoleate [peroxisome]

910664
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: FAA2 [peroxisome]

951184
type: SpeciesReference
stoichiometry: 1.0
species: 906008

906008
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: tetradecenoyl-CoA [peroxisome]

951136
type: SpeciesReference
stoichiometry: 1.0
species: 896373

951160
type: SpeciesReference
stoichiometry: 1.0
species: 895173

895173
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: AMP [peroxisome]

951124
type: SpeciesReference
stoichiometry: 1.0
species: 895329

895329
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: ATP [peroxisome]

951172
type: SpeciesReference
stoichiometry: 1.0
species: 897429

897429
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: diphosphate [peroxisome]

929099
type: Reaction
reversible: true
reactant: 929123
reactant: 929111
fast: false
is: SBO:0000176
reactant: 929135
product: 929159
modifier: 929171
name: adenosine monophosphate deaminase
product: 929147
notes: GENE_ASSOCIATION:YML035C

929123
type: SpeciesReference
stoichiometry: 1.0
species: 899037

929111
type: SpeciesReference
stoichiometry: 1.0
species: 895137

929135
type: SpeciesReference
stoichiometry: 1.0
species: 899145

929159
type: SpeciesReference
stoichiometry: 1.0
species: 899589

899589
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: IMP [cytoplasm]

908576
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: AMD1 [cytoplasm]

929147
type: SpeciesReference
stoichiometry: 1.0
species: 895089

918535
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GLR1:GRX2 [cytoplasm]

901725
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-tryptophan [cytoplasm]

902973
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: N-acetyl-alpha-D-glucosamine 1-phosphate [cytoplasm]

959967
type: Reaction
reactant: 959991
product: 960003
fast: false
reversible: true
notes: GENE_ASSOCIATION:(YCL052C and YJR013W)
product: 960015
is: SBO:0000176
modifier: meta s 2714 b r 0519
name: GPI-anchor assembly, step 5
reactant: 959979

959991
type: SpeciesReference
stoichiometry: 1.0
species: 897489

897489
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: dolichyl D-mannosyl phosphate [endoplasmic reticulum]

960003
type: SpeciesReference
stoichiometry: 1.0
species: 894248

894248
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 6-O-[alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl]-O-acyl-1-phosphatidyl-1D-myo-inositol [endoplasmic reticulum]

960015
type: SpeciesReference
stoichiometry: 1.0
species: 897513

897513
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: dolichyl phosphate [endoplasmic reticulum]

918595
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 05
name: GPI14:PBN1 [endoplasmic reticulum membrane]

meta c 05
type: Compartment
is: GO:0005789
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: endoplasmic reticulum membrane

959979
type: SpeciesReference
stoichiometry: 1.0
species: 894200

894200
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 6-(alpha-D-glucosaminyl)-O-acyl-1-phosphatidyl-1D-myo-inositol [endoplasmic reticulum]

969494
type: Reaction
notes: GENE_ASSOCIATION:YER065C
product: 969530
name: isocitrate lyase
is: SBO:0000176
fast: false
reactant: 969506
product: 969518
modifier: 969542
reversible: true

969530
type: SpeciesReference
stoichiometry: 1.0
species: 905756

905756
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: succinate [cytoplasm]

969506
type: SpeciesReference
stoichiometry: 1.0
species: 900549

900549
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: isocitrate(3-) [cytoplasm]

969518
type: SpeciesReference
stoichiometry: 1.0
species: 898881

898881
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: glyoxylate [cytoplasm]

912535
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ICL1 [cytoplasm]

910460
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ERG13 [mitochondrion]

897621
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dUTP [cytoplasm]

902205
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: mannan [endoplasmic reticulum]

meta r 1180
type: Reaction
product: 006932
reactant: 006920
notes: GENE_ASSOCIATION:
is described by: http://identifiers.org/pubmed/10653746
is: SBO:0000185
fast: false
reversible: true
name: isoamyl acetate transport

006932
type: SpeciesReference
stoichiometry: 1.0
species: 900441

900441
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: isoamyl acetate [extracellular]

006920
type: SpeciesReference
stoichiometry: 1.0
species: 900429

900429
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: isoamyl acetate [cytoplasm]

915701
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: RNR4 [nucleus]

914563
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PFK27 [cytoplasm]

903980
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: palmitoleate [cytoplasm]

935040
type: Reaction
product: 935100
is: SBO:0000176
reactant: 935064
product: 935088
reversible: true
fast: false
name: ATP adenylyltransferase
notes: GENE_ASSOCIATION:YCL050C
reactant: 935052
reactant: 935076
modifier: 935112

935100
type: SpeciesReference
stoichiometry: 1.0
species: 904256

935064
type: SpeciesReference
stoichiometry: 1.0
species: 898941

898941
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GTP [cytoplasm]

935088
type: SpeciesReference
stoichiometry: 1.0
species: 903944

903944
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: P1-(5'-adenosyl),P4-(5'-guanosyl) tetraphosphate [cytoplasm]

935052
type: SpeciesReference
stoichiometry: 1.0
species: 894813

935076
type: SpeciesReference
stoichiometry: 1.0
species: 899037

908600
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: APA1 [cytoplasm]

894404
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonic acid [cytoplasm]

898749
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: glycerol [extracellular]

954988
type: Reaction
reactant: 955012
fast: false
reactant: 955000
product: 955036
notes: GENE_ASSOCIATION:YEL047C
name: fumarate reductase FMN
modifier: 955048
is: SBO:0000176
reversible: true
product: 955024

955012
type: SpeciesReference
stoichiometry: 1.0
species: 898377

898377
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: fumarate [cytoplasm]

955000
type: SpeciesReference
stoichiometry: 1.0
species: 898293

898293
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FMNH2 [cytoplasm]

955036
type: SpeciesReference
stoichiometry: 1.0
species: 905756

917598
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: YEL047C [cytoplasm]

955024
type: SpeciesReference
stoichiometry: 1.0
species: 898257

898257
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FMN [cytoplasm]

011000
type: Reaction
product: 011036
reactant: 011024
name: orntithine transport
is: SBO:0000185
modifier: 011060
reactant: 011012
fast: false
reversible: true
modifier: 011072
notes: GENE_ASSOCIATION:(YEL063C or YKR039W)
product: 011048

011036
type: SpeciesReference
stoichiometry: 1.0
species: 899037

011024
type: SpeciesReference
stoichiometry: 1.0
species: 903764

903764
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: ornithine [extracellular]

909452
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: CAN1 [cell envelope]

011012
type: SpeciesReference
stoichiometry: 1.0
species: 899061

899061
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: H+ [extracellular]

911180
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: GAP1 [cell envelope]

011048
type: SpeciesReference
stoichiometry: 1.0
species: 903752

903752
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ornithine [cytoplasm]

meta r 1096
type: Reaction
product: 001421
reactant: 001409
notes: GENE_ASSOCIATION:
is described by: http://identifiers.org/pubmed/15215118
is: SBO:0000185
fast: false
reversible: true
name: (R)-mevalonate transport

001421
type: SpeciesReference
stoichiometry: 1.0
species: 891118

891118
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (R)-mevalonate [cytoplasm]

001409
type: SpeciesReference
stoichiometry: 1.0
species: 891130

891130
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: (R)-mevalonate [extracellular]

958527
type: Reaction
product: 958599
reactant: 958563
product: 958575
notes: GENE_ASSOCIATION:(YAL044C and YDR019C and YFL018C and YMR189W)
reversible: true
is: SBO:0000176
modifier: 958623
name: glycine cleavage system
product: 958611
reactant: 958551
product: 958587
reactant: 958539
fast: false

958599
type: SpeciesReference
stoichiometry: 1.0
species: 895521

958563
type: SpeciesReference
stoichiometry: 1.0
species: 906044

906044
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: THF [mitochondrion]

958575
type: SpeciesReference
stoichiometry: 1.0
species: 893924

893924
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 5,10-methylenetetrahydrofolate(2-) [mitochondrion]

958611
type: SpeciesReference
stoichiometry: 1.0
species: 903164

958551
type: SpeciesReference
stoichiometry: 1.0
species: 903104

958587
type: SpeciesReference
stoichiometry: 1.0
species: 895113

895113
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ammonium [mitochondrion]

958539
type: SpeciesReference
stoichiometry: 1.0
species: 901245

901245
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: L-glycine [mitochondrion]

901977
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: lauroyl-CoA [peroxisome]

916169
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SPE2 [cytoplasm]

956619
type: Reaction
product: 956667
is: SBO:0000176
name: glutamine-fructose-6-phosphate transaminase
reactant: 956643
fast: false
reversible: true
modifier: meta s 2113 b r 0477
notes: GENE_ASSOCIATION:YKL104C
reactant: 956631
product: 956655

956667
type: SpeciesReference
stoichiometry: 1.0
species: 901101

956643
type: SpeciesReference
stoichiometry: 1.0
species: 901185

901185
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-glutamine [cytoplasm]

911288
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GFA1 [cytoplasm]

956631
type: SpeciesReference
stoichiometry: 1.0
species: 896601

896601
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: D-fructose 6-phosphate [cytoplasm]

956655
type: SpeciesReference
stoichiometry: 1.0
species: 895017

895017
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: alpha-D-glucosamine 6-phosphate [cytoplasm]

929747
type: Reaction
product: 929831
is: SBO:0000176
modifier: 929843
reactant: 929759
name: adenylosuccinate synthase
reversible: true
product: 929795
product: 929819
product: 929807
fast: false
notes: GENE_ASSOCIATION:YNL220W
reactant: 929783
reactant: 929771

929831
type: SpeciesReference
stoichiometry: 1.0
species: 904256

908096
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADE12 [cytoplasm]

929759
type: SpeciesReference
stoichiometry: 1.0
species: 898941

929795
type: SpeciesReference
stoichiometry: 1.0
species: 894801

894801
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: adenylo-succinate [cytoplasm]

929819
type: SpeciesReference
stoichiometry: 2.0
species: 899037

929807
type: SpeciesReference
stoichiometry: 1.0
species: 898437

898437
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GDP [cytoplasm]

929783
type: SpeciesReference
stoichiometry: 1.0
species: 900897

900897
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-aspartate [cytoplasm]

929771
type: SpeciesReference
stoichiometry: 1.0
species: 899589

985047
type: Reaction
reactant: 985071
fast: false
modifier: meta s 1975 b r 0881
is: SBO:0000176
name: phosphatidylserine synthase
product: 985095
reversible: true
product: 985107
reactant: 985059
product: 985083
notes: GENE_ASSOCIATION:YER026C

985071
type: SpeciesReference
stoichiometry: 1.0
species: 901641

901641
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: L-serine [endoplasmic reticulum]

909632
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: CHO1 [endoplasmic reticulum]

985095
type: SpeciesReference
stoichiometry: 2.0
species: 899049

985107
type: SpeciesReference
stoichiometry: 1.0
species: 904424

904424
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: phosphatidyl-L-serine [endoplasmic reticulum]

985059
type: SpeciesReference
stoichiometry: 1.0
species: 895653

895653
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: CDP-diacylglycerol [endoplasmic reticulum]

985083
type: SpeciesReference
stoichiometry: 1.0
species: 896289

896289
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: CMP [endoplasmic reticulum]

913999
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: NAM2 [mitochondrion]

916728
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: THS1 [cytoplasm]

907364
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TRX1 [cytoplasm]

909392
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CAB1 [cytoplasm]

916650
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: THI6 [cytoplasm]

979048
type: Reaction
notes: GENE_ASSOCIATION:YER005W
product: 979108
product: 979084
product: 979096
is: SBO:0000176
fast: false
name: nucleoside diphosphatase
reactant: 979072
modifier: 979120
reactant: 979060
reversible: true

979108
type: SpeciesReference
stoichiometry: 1.0
species: 904256

979084
type: SpeciesReference
stoichiometry: 1.0
species: 899037

979096
type: SpeciesReference
stoichiometry: 1.0
species: 899589

979072
type: SpeciesReference
stoichiometry: 1.0
species: 899553

899553
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: IDP [cytoplasm]

917706
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: YND1 [cytoplasm]

979060
type: SpeciesReference
stoichiometry: 1.0
species: 899145

904976
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: pseudouridine 5'-phosphate [cytoplasm]

896997
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: decanoate [cytoplasm]

916117
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SOL3 [cytoplasm]

965330
type: Reaction
product: 965366
product: 965378
name: IPC synthase
reversible: true
reactant: 965342
fast: false
modifier: meta s 2656 b r 0594
is: SBO:0000176
notes: GENE_ASSOCIATION:(YDR367W and YKL004W)
reactant: 965354

965366
type: SpeciesReference
stoichiometry: 1.0
species: 897225

897225
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: diglyceride [Golgi]

965378
type: SpeciesReference
stoichiometry: 1.0
species: 900333

900333
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: inositol-P-ceramide D (C24) [Golgi]

965342
type: SpeciesReference
stoichiometry: 1.0
species: 891733

891733
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: 1-phosphatidyl-1D-myo-inositol [Golgi]

917898
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: AUR1:KEI1 [Golgi]

965354
type: SpeciesReference
stoichiometry: 1.0
species: 895989

895989
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: ceramide-4 (C24) [Golgi]

959895
type: Reaction
is: SBO:0000176
modifier: meta s 2134 b r 0518
product: 959943
product: 959931
notes: GENE_ASSOCIATION:YMR281W
fast: false
reversible: true
reactant: 959919
reactant: 959907
product: 959955
name: GPI-anchor assembly, step 2

911540
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 05
name: GPI12 [endoplasmic reticulum membrane]

959943
type: SpeciesReference
stoichiometry: 1.0
species: 894500

894500
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: acetate [endoplasmic reticulum]

959931
type: SpeciesReference
stoichiometry: 1.0
species: 894188

894188
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 6-(alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol [endoplasmic reticulum]

959919
type: SpeciesReference
stoichiometry: 1.0
species: 899157

959907
type: SpeciesReference
stoichiometry: 1.0
species: 894212

894212
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 6-(N-acetyl-alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol [endoplasmic reticulum]

959955
type: SpeciesReference
stoichiometry: 1.0
species: 899049

894068
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5-formyltetrahydrofolic acid [cytoplasm]

917982
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: CCP1:CYC7 [mitochondrion]

899013
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: guanosine [mitochondrion]

010196
type: Reaction
modifier: 010292
is: SBO:0000185
product: 010232
modifier: 010280
modifier: 010304
reactant: 010208
product: 010244
notes: GENE_ASSOCIATION:(YBR068C or YBR069C or YCL025C or YDR046C or YKR039W)
name: L-valine transport
reactant: 010220
fast: false
modifier: 010256
reversible: true
modifier: 010268

010232
type: SpeciesReference
stoichiometry: 1.0
species: 899037

909140
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: BAP3 [cell envelope]

916442
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: TAT1 [cell envelope]

010208
type: SpeciesReference
stoichiometry: 1.0
species: 899061

010244
type: SpeciesReference
stoichiometry: 1.0
species: 901821

901821
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-valine [cytoplasm]

010220
type: SpeciesReference
stoichiometry: 1.0
species: 901833

901833
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: L-valine [extracellular]

908360
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: AGP1 [cell envelope]

909128
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: BAP2 [cell envelope]

919100
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TRR1:TRX2 [cytoplasm]

996442
type: Reaction
reactant: 996466
fast: false
product: 996538
modifier: meta s 2253 b r 1029
product: 996514
product: 996490
reactant: 996478
name: taurine dioxygenase
product: 996526
reactant: 996454
product: 996502
reversible: true
is: SBO:0000176
notes: GENE_ASSOCIATION:YLL057C

996466
type: SpeciesReference
stoichiometry: 1.0
species: 903848

903848
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: oxygen [cytoplasm]

996538
type: SpeciesReference
stoichiometry: 1.0
species: 905840

905840
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: sulphite [cytoplasm]

912967
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: JLP1 [cytoplasm]

996514
type: SpeciesReference
stoichiometry: 1.0
species: 899037

996490
type: SpeciesReference
stoichiometry: 1.0
species: 895065

895065
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: aminoacetaldehyde [cytoplasm]

996478
type: SpeciesReference
stoichiometry: 1.0
species: 905864

905864
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: taurine [cytoplasm]

996526
type: SpeciesReference
stoichiometry: 1.0
species: 905756

996454
type: SpeciesReference
stoichiometry: 1.0
species: 892689

996502
type: SpeciesReference
stoichiometry: 1.0
species: 895485

meta r 0923
type: Reaction
name: PI3P formation by Vps34
reversible: true
product: 987927
notes: GENE_ASSOCIATION:YLR240W
modifier: meta s 2614 b r 0923
reactant: 987891
reactant: 987903
fast: false
is described by: S000004230
is: SBO:0000176
product: 987915

987927
type: SpeciesReference
stoichiometry: 1.0
species: 894885

894885
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: ADP [vacuole]

meta c 17
type: Compartment
is: GO:0005773
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: vacuole

917394
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 16
name: VPS34 [vacuolar membrane]

meta c 16
type: Compartment
is: GO:0005774
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: vacuolar membrane

987891
type: SpeciesReference
stoichiometry: 1.0
species: 895341

895341
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: ATP [vacuole]

987903
type: SpeciesReference
stoichiometry: 1.0
species: 904676

904676
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: phosphatidylinositol [vacuole]

987915
type: SpeciesReference
stoichiometry: 1.0
species: 891890

891890
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: 1-phosphatidyl-1D-myo-inositol 3-phosphate [vacuole]

940895
type: Reaction
name: citrate to cis-aconitate(3-), cytoplasmic
product: 940919
reactant: 940907
is: SBO:0000176
fast: false
reversible: true
product: 940931
modifier: meta s 1837 b r 0303
notes: GENE_ASSOCIATION:YLR304C

940919
type: SpeciesReference
stoichiometry: 1.0
species: 896169

896169
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: cis-aconitate(3-) [cytoplasm]

940907
type: SpeciesReference
stoichiometry: 1.0
species: 896241

896241
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: citrate(3-) [cytoplasm]

940931
type: SpeciesReference
stoichiometry: 1.0
species: 899145

907976
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ACO1 [cytoplasm]

964106
type: Reaction
fast: false
reversible: true
is: SBO:0000176
name: inositol-1,4,5-triphosphate 6-kinase, nucleus
product: 964154
reactant: 964142
reactant: 964130
modifier: meta s 1905 b r 0574
notes: GENE_ASSOCIATION:YDR173C
reactant: 964118
product: 964166

964154
type: SpeciesReference
stoichiometry: 1.0
species: 892132

892132
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: 1D-myo-inositol 1,4,5,6-tetrakisphosphate [nucleus]

964142
type: SpeciesReference
stoichiometry: 1.0
species: 899109

899109
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: H+ [nucleus]

964130
type: SpeciesReference
stoichiometry: 1.0
species: 895317

895317
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: ATP [nucleus]

908792
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: ARG82 [nucleus]

964118
type: SpeciesReference
stoichiometry: 1.0
species: 892144

892144
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: 1D-myo-inositol 1,4,5-trisphosphate [nucleus]

964166
type: SpeciesReference
stoichiometry: 1.0
species: 894861

894861
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: ADP [nucleus]

976373
type: Reaction
modifier: 976409
product: 976397
reactant: 976385
notes: GENE_ASSOCIATION:YJL153C
is: SBO:0000176
fast: false
reversible: true
name: myo-inositol-1-phosphate synthase

912739
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: INO1 [cytoplasm]

976397
type: SpeciesReference
stoichiometry: 1.0
species: 892156

892156
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 1D-myo-inositol 1-phosphate [cytoplasm]

976385
type: SpeciesReference
stoichiometry: 1.0
species: 896721

892410
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-deoxy-D-ribose [cytoplasm]

902241
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: mannose-1D-myo-inositol 1-phosphate [endoplasmic reticulum]

904316
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: phosphate [peroxisome]

ORG:
  orgname: University of California, San Diego
n:
  given: Markus
  family: Herrgard

913651
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MET3 [cytoplasm]

918559
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GLR1:GRX4 [cytoplasm]

944998
type: Reaction
notes: GENE_ASSOCIATION:YKL152C
product: 945034
fast: false
reactant: 945010
modifier: meta s 2137 b r 0356
reversible: true
is: SBO:0000176
name: diphosphoglyceromutase
product: 945022

945034
type: SpeciesReference
stoichiometry: 1.0
species: 899037

945010
type: SpeciesReference
stoichiometry: 1.0
species: 891540

891540
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 1,3-bisphospho-D-glycerate [cytoplasm]

911576
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GPM1 [cytoplasm]

945022
type: SpeciesReference
stoichiometry: 1.0
species: 892265

892265
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2,3-bisphospho-D-glyceric acid [cytoplasm]

912631
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ILV1 [mitochondrion]

896889
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: dAMP [mitochondrion]

906404
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TTP [cytoplasm]

897645
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: episterol [endoplasmic reticulum]

967970
type: Reaction
is: SBO:0000176
name: IPS phospholipase C
reversible: true
modifier: meta s 2246 b r 0638
fast: false
product: 968018
notes: GENE_ASSOCIATION:YER019W
reactant: 967982
reactant: 967994
product: 968006

968018
type: SpeciesReference
stoichiometry: 1.0
species: 902229

902229
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: mannose-(1D-myo-inositol 1-phosphate)2 [mitochondrion]

967982
type: SpeciesReference
stoichiometry: 1.0
species: 899193

967994
type: SpeciesReference
stoichiometry: 1.0
species: 899841

899841
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: inositol phosphomannosylinositol phosphoceramide B' (C24) [mitochondrion]

968006
type: SpeciesReference
stoichiometry: 1.0
species: 895857

895857
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ceramide-2' (C24) [mitochondrion]

893876
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5'-S-methyl-5'-thioadenosine [cytoplasm]

916130
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SOL4 [cytoplasm]

916852
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 16
name: TPO1 [vacuolar membrane]

982888
type: Reaction
reactant: 982900
modifier: meta s 1914 b r 0851
fast: false
reactant: 982912
product: 982924
modifier: meta s 1913 b r 0851
is: SBO:0000176
reversible: true
notes: GENE_ASSOCIATION:(YGL202W or YHR137W)
name: phenylalanine transaminase
product: 982936

982900
type: SpeciesReference
stoichiometry: 1.0
species: 892689

982912
type: SpeciesReference
stoichiometry: 1.0
species: 901545

901545
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-phenylalanine [cytoplasm]

982924
type: SpeciesReference
stoichiometry: 1.0
species: 900657

982936
type: SpeciesReference
stoichiometry: 1.0
species: 901101

894957
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: allantoin [cytoplasm]

914815
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 16
name: PIB1 [vacuolar membrane]

009908
type: Reaction
modifier: meta s 1924 b r 1220
product: 009932
reactant: 009920
notes: GENE_ASSOCIATION:YCL038C
is: SBO:0000185
fast: false
reversible: true
name: L-tyrosine transport

909020
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 16
name: ATG22 [vacuolar membrane]

009932
type: SpeciesReference
stoichiometry: 1.0
species: 901761

009920
type: SpeciesReference
stoichiometry: 1.0
species: 901809

901809
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: L-tyrosine [vacuole]

999585
type: Reaction
reactant: 999609
reactant: 999597
notes: GENE_ASSOCIATION:YKL024C
name: UMP kinase
modifier: 999645
product: 999621
fast: false
product: 999633
is: SBO:0000176
reversible: true

999609
type: SpeciesReference
stoichiometry: 1.0
species: 906584

906584
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: UMP [nucleus]

999597
type: SpeciesReference
stoichiometry: 1.0
species: 895317

917214
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: URA6 [nucleus]

999621
type: SpeciesReference
stoichiometry: 1.0
species: 894861

999633
type: SpeciesReference
stoichiometry: 1.0
species: 906488

906488
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: UDP [nucleus]

918294
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: DOT5:TRX1 [nucleus]

916985
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TRP4 [cytoplasm]

900237
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: inositol-P-ceramide B' (C26) [mitochondrion]

892301
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-(3-amino-3-carboxypropyl)-L-histidine [cytoplasm]

912188
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HOR2 [cytoplasm]

901881
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: lanosterol [extracellular]

940439
type: Reaction
is: SBO:0000176
reactant: 940463
fast: false
notes: GENE_ASSOCIATION:YMR101C
reversible: true
modifier: meta s 2521 b r 0296
product: 940487
product: 940475
reactant: 940451
name: cis-prenyltransferase step 16

940463
type: SpeciesReference
stoichiometry: 1.0
species: 903620

903620
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: octadecaprenyl diphosphate [lipid particle]

916234
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: SRT1 [lipid particle]

940487
type: SpeciesReference
stoichiometry: 1.0
species: 903416

903416
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: nonadecaprenyl diphosphate [lipid particle]

940475
type: SpeciesReference
stoichiometry: 1.0
species: 897393

897393
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: diphosphate [lipid particle]

940451
type: SpeciesReference
stoichiometry: 1.0
species: 900597

900597
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: isopentenyl diphosphate [lipid particle]

939419
type: Reaction
reactant: 939431
modifier: meta s 1908 b r 0279
product: 939455
notes: GENE_ASSOCIATION:YGL148W
reversible: true
name: chorismate synthase
is: SBO:0000176
fast: false
product: 939443

939431
type: SpeciesReference
stoichiometry: 1.0
species: 894128

894128
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5-O-(1-carboxyvinyl)-3-phosphoshikimic acid [cytoplasm]

908828
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ARO2 [cytoplasm]

939455
type: SpeciesReference
stoichiometry: 1.0
species: 904256

939443
type: SpeciesReference
stoichiometry: 1.0
species: 896157

896157
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: chorismate(2-) [cytoplasm]

905912
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TDP [cytoplasm]

921945
type: Reaction
name: 3-dehydroquinate dehydratase
modifier: 921993
is: SBO:0000176
product: 921981
reversible: true
notes: GENE_ASSOCIATION:YDR127W
fast: false
reactant: 921957
product: 921969

908804
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ARO1 [cytoplasm]

921981
type: SpeciesReference
stoichiometry: 1.0
species: 899145

921957
type: SpeciesReference
stoichiometry: 1.0
species: 892989

892989
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3-dehydroquinate [cytoplasm]

921969
type: SpeciesReference
stoichiometry: 1.0
species: 893001

893001
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3-dehydroshikimate [cytoplasm]

910076
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: DGA1 [lipid particle]

900957
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-aspartate 4-semialdehyde [cytoplasm]

891576
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 1-(5-phosphoribosyl)-5'-AMP [cytoplasm]

897681
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: episteryl palmitoleate [endoplasmic reticulum]

008564
type: Reaction
reactant: 008588
product: 008612
fast: false
reactant: 008576
reversible: true
notes: GENE_ASSOCIATION:(YKL146W or YNL101W)
is: SBO:0000185
modifier: meta s 1931 b r 1204
modifier: meta s 1930 b r 1204
product: 008600
name: L-isoleucine transport

008588
type: SpeciesReference
stoichiometry: 1.0
species: 901389

901389
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: L-isoleucine [vacuole]

008612
type: SpeciesReference
stoichiometry: 1.0
species: 901353

008576
type: SpeciesReference
stoichiometry: 1.0
species: 899133

899133
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: H+ [vacuole]

909104
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 16
name: AVT4 [vacuolar membrane]

909092
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 16
name: AVT3 [vacuolar membrane]

008600
type: SpeciesReference
stoichiometry: 1.0
species: 899037

902649
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: methanethiol [cytoplasm]

911612
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GPX1 [cytoplasm]

916156
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SPE1 [cytoplasm]

895953
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: ceramide-3 (C26) [Golgi]

906140
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: TMP [extracellular]

907304
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: tRNA(Trp), mitchondrial [mitochondrion]

910136
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: DIT1 [cytoplasm]

994246
type: Reaction
is: SBO:0000176
reversible: true
reactant: 994258
reactant: 994270
product: 994294
modifier: meta s 2314 b r 0998
product: 994282
product: 994306
notes: GENE_ASSOCIATION:YBR213W
fast: false
name: sirohydrochlorin dehydrogenase

994258
type: SpeciesReference
stoichiometry: 1.0
species: 903188

994270
type: SpeciesReference
stoichiometry: 1.0
species: 904844

904844
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: precorrin-2 [cytoplasm]

994294
type: SpeciesReference
stoichiometry: 1.0
species: 903236

913699
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MET8 [cytoplasm]

994282
type: SpeciesReference
stoichiometry: 1.0
species: 899037

994306
type: SpeciesReference
stoichiometry: 1.0
species: 905480

905480
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: sirohydrochlorin [cytoplasm]

951292
type: Reaction
reactant: 951304
product: 951340
product: 951352
name: fatty-acyl-ACP hydrolase
fast: false
product: 951328
is: SBO:0000176
modifier: 951364
notes: GENE_ASSOCIATION:(YKL182W and YPL231W)
reactant: 951316
reversible: true

951304
type: SpeciesReference
stoichiometry: 1.0
species: 899145

951340
type: SpeciesReference
stoichiometry: 1.0
species: 902769

902769
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: myristate [cytoplasm]

951352
type: SpeciesReference
stoichiometry: 1.0
species: 908060

908060
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: acyl-carrier protein [cytoplasm]

951328
type: SpeciesReference
stoichiometry: 1.0
species: 899037

918391
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FAS1:FAS2 [cytoplasm]

951316
type: SpeciesReference
stoichiometry: 1.0
species: 902817

902817
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: myristoyl-ACP [cytoplasm]

004613
type: Reaction
modifier: meta s 2020 b r 1144
product: 004637
reactant: 004625
notes: GENE_ASSOCIATION:YMR162C
is: SBO:0000185
fast: false
reversible: true
name: DNF3 flippase

004637
type: SpeciesReference
stoichiometry: 1.0
species: 904604

904604
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: phosphatidylethanolamine [Golgi]

004625
type: SpeciesReference
stoichiometry: 1.0
species: 904580

904580
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: phosphatidylethanolamine [cytoplasm]

935280
type: Reaction
name: ATP synthase
reactant: 935304
is: SBO:0000176
fast: false
notes: GENE_ASSOCIATION:((Q0080 and Q0085 and Q0130 and YBL099W and YBR039W and YDL004W and YDR298C and YDR322C-A and YDR377W and YJR121W and YKL016C and YLR295C and YML081C-A and YPL078C and YPL271W) or (Q0080 and Q0085 and Q0130 and YBL099W and YBR039W and YDL004W and YDR298C and YDR377W and YJR121W and YKL016C and YLR295C and YML081C-A and YPL078C and YPL271W and YPR020W))
reversible: true
modifier: meta s 2655 b r 0226
product: 935352
modifier: meta s 2654 b r 0226
reactant: 935316
product: 935340
reactant: 935292
product: 935328

935304
type: SpeciesReference
stoichiometry: 3.0
species: 899037

917886
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: ATP1:ATP14:ATP15:ATP16:ATP17:ATP18:ATP2:ATP3:ATP4:ATP5:ATP6:ATP7:ATP8:OLI1:TIM11 [mitochondrial membrane]

935352
type: SpeciesReference
stoichiometry: 1.0
species: 899193

917874
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: ATP1:ATP14:ATP15:ATP16:ATP17:ATP18:ATP2:ATP20:ATP3:ATP4:ATP5:ATP6:ATP7:ATP8:OLI1 [mitochondrial membrane]

935316
type: SpeciesReference
stoichiometry: 1.0
species: 904304

935340
type: SpeciesReference
stoichiometry: 2.0
species: 899097

935292
type: SpeciesReference
stoichiometry: 1.0
species: 894849

935328
type: SpeciesReference
stoichiometry: 1.0
species: 895305

902325
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: mannosylinositol phosphorylceramide A (C26) [mitochondrion]

895869
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ceramide-2' (C26) [endoplasmic reticulum]

998937
type: Reaction
is: SBO:0000176
reversible: true
fast: false
product: 998985
name: tyrosine transaminase
reactant: 998949
reactant: 998961
notes: GENE_ASSOCIATION:YKL106W
modifier: 998997
product: 998973

998985
type: SpeciesReference
stoichiometry: 1.0
species: 901785

901785
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: L-tyrosine [mitochondrion]

998949
type: SpeciesReference
stoichiometry: 1.0
species: 892929

892929
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 3-(4-hydroxyphenyl)pyruvate [mitochondrion]

998961
type: SpeciesReference
stoichiometry: 1.0
species: 901125

901125
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: L-glutamate [mitochondrion]

907880
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: AAT1 [mitochondrion]

998973
type: SpeciesReference
stoichiometry: 1.0
species: 892701

892701
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 2-oxoglutarate [mitochondrion]

989643
type: Reaction
is: SBO:0000176
reversible: true
fast: false
product: 989679
reactant: 989667
product: 989691
reactant: 989655
name: purine-nucleoside phosphorylase (Guanosine)
notes: GENE_ASSOCIATION:YLR209C
modifier: 989703

989679
type: SpeciesReference
stoichiometry: 1.0
species: 895041

989667
type: SpeciesReference
stoichiometry: 1.0
species: 904256

989691
type: SpeciesReference
stoichiometry: 1.0
species: 898965

898965
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: guanine [cytoplasm]

989655
type: SpeciesReference
stoichiometry: 1.0
species: 899001

899001
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: guanosine [cytoplasm]

905192
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: riboflavin [mitochondrion]

907280
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: tRNA(Thr), mitchondrial [mitochondrion]

917406
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 08
name: VRG4 [Golgi membrane]

916876
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 16
name: TPO2 [vacuolar membrane]

912223
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: HST2 [nucleus]

901209
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: L-glutamine [vacuole]

915295
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PUS1 [cytoplasm]

909068
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: AUS1 [cell envelope]

918463
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: GCV1:GCV2:GCV3:PDA1:PDB1 [mitochondrion]

900849
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-asparagine [cytoplasm]

916221
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: SPR1 [extracellular]

945118
type: Reaction
product: 945202
reactant: 945166
reversible: true
modifier: meta s 2254 b r 0358
name: diphosphoinositol-1,3,4,6-tetrakisphosphate synthase
is: SBO:0000176
fast: false
notes: GENE_ASSOCIATION:YDR017C
product: 945178
reactant: 945130
product: 945190
reactant: 945142
reactant: 945154

945202
type: SpeciesReference
stoichiometry: 2.0
species: 899145

945166
type: SpeciesReference
stoichiometry: 2.0
species: 904256

912979
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: KCS1 [cytoplasm]

945178
type: SpeciesReference
stoichiometry: 1.0
species: 893948

893948
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5,6-bis(diphospho)-1D-myo-inositol tetrakisphosphate [cytoplasm]

945130
type: SpeciesReference
stoichiometry: 1.0
species: 895269

945190
type: SpeciesReference
stoichiometry: 1.0
species: 894813

945142
type: SpeciesReference
stoichiometry: 5.0
species: 899037

945154
type: SpeciesReference
stoichiometry: 1.0
species: 902721

902721
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: myo-inositol 1,3,4,5,6-pentakisphosphate [cytoplasm]

921299
type: Reaction
notes: GENE_ASSOCIATION:YHR208W
is: SBO:0000176
name: 2-oxo-4-methyl-3-carboxypentanoate decarboxylation
reactant: 921325
reactant: 921312
fast: false
modifier: 921362
reversible: true
product: 921337
product: 921350

921325
type: SpeciesReference
stoichiometry: 1.0
species: 899097

921312
type: SpeciesReference
stoichiometry: 1.0
species: 890913

890913
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: (2S)-2-isopropyl-3-oxosuccinate(2-) [mitochondrion]

909152
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: BAT1 [mitochondrion]

921337
type: SpeciesReference
stoichiometry: 1.0
species: 893744

893744
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 4-methyl-2-oxopentanoate [mitochondrion]

921350
type: SpeciesReference
stoichiometry: 1.0
species: 895521

918379
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ERG5:NCP1 [cytoplasm]

901077
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-gamma-glutamyl-L-cysteine [cytoplasm]

893780
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 4-phospho-L-aspartate [cytoplasm]

920815
type: Reaction
fast: false
notes: GENE_ASSOCIATION:YGL009C
reactant: 920841
reactant: 920828
product: 920853
name: 2-isopropylmalate hydratase
modifier: meta s 2271 b r 0023
reversible: true
is: SBO:0000176

920841
type: SpeciesReference
stoichiometry: 1.0
species: 899145

920828
type: SpeciesReference
stoichiometry: 1.0
species: 892530

920853
type: SpeciesReference
stoichiometry: 1.0
species: 892506

892506
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-isopropylmalate [cytoplasm]

902217
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: mannose-(1D-myo-inositol 1-phosphate)2 [endoplasmic reticulum]

924983
type: Reaction
product: 925043
fast: false
modifier: meta s 2254 b r 0083
name: 5-diphosphoinositol-1,2,3,4,6-pentakisphosphate synthase
reactant: 925019
reversible: true
reactant: 924995
is: SBO:0000176
reactant: 925007
notes: GENE_ASSOCIATION:YDR017C
product: 925031

925043
type: SpeciesReference
stoichiometry: 1.0
species: 894813

925019
type: SpeciesReference
stoichiometry: 1.0
species: 902745

902745
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: myo-inositol hexakisphosphate [cytoplasm]

924995
type: SpeciesReference
stoichiometry: 1.0
species: 895269

925007
type: SpeciesReference
stoichiometry: 1.0
species: 899037

925031
type: SpeciesReference
stoichiometry: 1.0
species: 894056

894056
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5-diphospho-1D-myo-inositol pentakisphosphate [cytoplasm]

916913
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: TPO4 [cell envelope]

907172
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: tRNA(Lys), cytoplasmic [cytoplasm]

899721
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: inositol phosphomannosylinositol phosphoceramide A (C26) [Golgi]

894945
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: allantoate [extracellular]

984855
type: Reaction
reactant: 984867
name: phosphatidylserine decarboxylase
product: 984891
product: 984879
modifier: 984903
reversible: true
fast: false
is: SBO:0000176
notes: GENE_ASSOCIATION:YGR170W

984867
type: SpeciesReference
stoichiometry: 1.0
species: 904436

984891
type: SpeciesReference
stoichiometry: 1.0
species: 904604

984879
type: SpeciesReference
stoichiometry: 1.0
species: 895509

895509
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: carbon dioxide [Golgi]

915271
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: PSD2 [Golgi]

913327
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: LYS1 [cytoplasm]

003353
type: Reaction
is: SBO:0000185
reactant: 003365
reactant: 003377
reactant: 003389
modifier: meta s 2470 b r 1130
product: 003401
product: 003413
reversible: true
fast: false
notes: GENE_ASSOCIATION:YBR192W
name: CTP transport
product: 003425

003365
type: SpeciesReference
stoichiometry: 1.0
species: 896301

896301
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: CMP [mitochondrion]

003377
type: SpeciesReference
stoichiometry: 1.0
species: 896397

003389
type: SpeciesReference
stoichiometry: 1.0
species: 899037

915571
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: RIM2 [mitochondrial membrane]

003401
type: SpeciesReference
stoichiometry: 1.0
species: 896277

896277
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CMP [cytoplasm]

003413
type: SpeciesReference
stoichiometry: 1.0
species: 896421

896421
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: CTP [mitochondrion]

003425
type: SpeciesReference
stoichiometry: 1.0
species: 899097

949912
type: Reaction
fast: false
notes: GENE_ASSOCIATION:(YIL009W or YMR246W or YOR317W)
reactant: 949948
product: 949984
modifier: 950008
product: 949972
reversible: true
reactant: 949924
name: fatty-acid--CoA ligase (hexadecenoate)
is: SBO:0000176
modifier: 949996
reactant: 949936
modifier: 950020
product: 949960

949948
type: SpeciesReference
stoichiometry: 1.0
species: 903980

949984
type: SpeciesReference
stoichiometry: 1.0
species: 899325

899325
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: hexadec-2-enoyl-CoA [cytoplasm]

949972
type: SpeciesReference
stoichiometry: 1.0
species: 897369

949924
type: SpeciesReference
stoichiometry: 1.0
species: 895269

949936
type: SpeciesReference
stoichiometry: 1.0
species: 896313

949960
type: SpeciesReference
stoichiometry: 1.0
species: 895137

893084
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3-hydroxy-3-methylglutaryl-CoA [cytoplasm]

966590
type: Reaction
modifier: meta s 2245 b r 0615
reactant: 966614
product: 966626
name: IPS phospholipase C
is: SBO:0000176
product: 966638
reactant: 966602
fast: false
notes: GENE_ASSOCIATION:YER019W
reversible: true

966614
type: SpeciesReference
stoichiometry: 1.0
species: 899997

899997
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: inositol phosphomannosylinositol phosphoceramide D (C26) [endoplasmic reticulum]

966626
type: SpeciesReference
stoichiometry: 1.0
species: 896013

896013
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ceramide-4 (C26) [endoplasmic reticulum]

966638
type: SpeciesReference
stoichiometry: 1.0
species: 902217

966602
type: SpeciesReference
stoichiometry: 1.0
species: 899157

912092
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HMG1 [cytoplasm]

912307
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HXK2 [cytoplasm]

907376
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: TRX1 [mitochondrion]

896325
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: coenzyme A [endoplasmic reticulum]

914971
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: PMT3 [endoplasmic reticulum]

908744
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ARG4 [cytoplasm]

982456
type: Reaction
reactant: 982480
product: 982504
name: peroxisomal acyl-CoA thioesterase
is: SBO:0000176
notes: GENE_ASSOCIATION:YJR019C
product: 982516
product: 982492
reactant: 982468
modifier: meta s 2543 b r 0845
reversible: true
fast: false

982480
type: SpeciesReference
stoichiometry: 1.0
species: 901977

982504
type: SpeciesReference
stoichiometry: 1.0
species: 899121

982516
type: SpeciesReference
stoichiometry: 1.0
species: 901929

901929
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: laurate [peroxisome]

982492
type: SpeciesReference
stoichiometry: 1.0
species: 896373

982468
type: SpeciesReference
stoichiometry: 1.0
species: 899217

916520
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: TES1 [peroxisome]

916973
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TRP3 [cytoplasm]

904496
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: phosphatidyl-N-methylethanolamine [mitochondrion]

897273
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dihydrofolic acid [cytoplasm]

916247
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: SSU1 [cell envelope]

909464
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CAR1 [cytoplasm]

904688
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: phosphoenolpyruvate [cytoplasm]

meta r 1122
type: Reaction
product: 002969
reactant: 002957
notes: GENE_ASSOCIATION:
is described by: http://identifiers.org/pubmed/12484746
is: SBO:0000185
fast: false
reversible: true
name: ceramide-2' (sphinganine:n-C26:0OH) transport

002969
type: SpeciesReference
stoichiometry: 1.0
species: 895881

895881
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: ceramide-2' (C26) [Golgi]

002957
type: SpeciesReference
stoichiometry: 1.0
species: 895869

989859
type: Reaction
reactant: 989883
fast: false
product: 989907
name: purine-nucleoside phosphorylase (Xanthosine)
modifier: 989919
product: 989895
reactant: 989871
reversible: true
notes: GENE_ASSOCIATION:YLR209C
is: SBO:0000176

989883
type: SpeciesReference
stoichiometry: 1.0
species: 906764

906764
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: xanthosine [cytoplasm]

989907
type: SpeciesReference
stoichiometry: 1.0
species: 895041

989895
type: SpeciesReference
stoichiometry: 1.0
species: 894452

894452
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 9H-xanthine [cytoplasm]

989871
type: SpeciesReference
stoichiometry: 1.0
species: 904256

960639
type: Reaction
reactant: 960663
fast: false
notes: GENE_ASSOCIATION:YDR454C
name: guanylate kinase (GMP:dATP)
is: SBO:0000176
product: 960687
product: 960675
reactant: 960651
modifier: 960699
reversible: true

960663
type: SpeciesReference
stoichiometry: 1.0
species: 898905

898905
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GMP [cytoplasm]

960687
type: SpeciesReference
stoichiometry: 1.0
species: 898437

960675
type: SpeciesReference
stoichiometry: 1.0
species: 896853

896853
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dADP [cytoplasm]

960651
type: SpeciesReference
stoichiometry: 1.0
species: 896901

896901
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dATP [cytoplasm]

911780
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GUK1 [cytoplasm]

891480
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (Z)-tetradec-7-enoyl-ACP [cytoplasm]

900861
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: L-asparagine [extracellular]

897189
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dIDP [cytoplasm]

911888
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HEM13 [cytoplasm]

966530
type: Reaction
reversible: true
reactant: 966554
notes: GENE_ASSOCIATION:YER019W
name: IPS phospholipase C
fast: false
product: 966578
product: 966566
reactant: 966542
is: SBO:0000176
modifier: meta s 2245 b r 0614

966554
type: SpeciesReference
stoichiometry: 1.0
species: 899961

899961
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: inositol phosphomannosylinositol phosphoceramide D (C24) [endoplasmic reticulum]

966578
type: SpeciesReference
stoichiometry: 1.0
species: 902217

966566
type: SpeciesReference
stoichiometry: 1.0
species: 895977

895977
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ceramide-4 (C24) [endoplasmic reticulum]

966542
type: SpeciesReference
stoichiometry: 1.0
species: 899157

012956
type: Reaction
modifier: meta s 2196 b r 1271
product: 012980
reactant: 012968
notes: GENE_ASSOCIATION:YPL244C
is: SBO:0000185
fast: false
reversible: true
name: UDPgalactose transport

912283
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 08
name: HUT1 [Golgi membrane]

012980
type: SpeciesReference
stoichiometry: 1.0
species: 906512

906512
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: UDP-D-galactose [Golgi]

012968
type: SpeciesReference
stoichiometry: 1.0
species: 906500

meta r 0828
type: Reaction
reversible: true
name: OSH4 endoplasmic reticulum to cytoplasm
is: SBO:0000176
reactant: 981424
reactant: 981412
is described by: http://identifiers.org/pubmed/17434796
notes: GENE_ASSOCIATION:
product: 981436
fast: false

981424
type: SpeciesReference
stoichiometry: 1.0
species: 912991

912991
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: KES1 [cytoplasm]

981412
type: SpeciesReference
stoichiometry: 1.0
species: 903908

903908
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: oxysterol [endoplasmic reticulum]

981436
type: SpeciesReference
stoichiometry: 1.0
species: 907652

907652
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: KES1:oxysterol [cytoplasm]

985407
type: Reaction
reactant: 985431
fast: false
name: phosphofructokinase
is: SBO:0000176
product: 985455
product: 985443
reactant: 985419
notes: GENE_ASSOCIATION:(YGR240C and YMR205C)
product: 985467
modifier: meta s 2729 b r 0886
reversible: true

985431
type: SpeciesReference
stoichiometry: 1.0
species: 896601

985455
type: SpeciesReference
stoichiometry: 1.0
species: 896577

896577
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: D-fructose 1,6-bisphosphate [cytoplasm]

985443
type: SpeciesReference
stoichiometry: 1.0
species: 894813

985419
type: SpeciesReference
stoichiometry: 1.0
species: 895269

985467
type: SpeciesReference
stoichiometry: 1.0
species: 899037

918776
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PFK1:PFK2 [cytoplasm]

953536
type: Reaction
name: ferrochelatase
product: 953584
fast: false
reactant: 953560
modifier: 953596
reversible: true
is: SBO:0000176
reactant: 953548
notes: GENE_ASSOCIATION:YOR176W
product: 953572

953584
type: SpeciesReference
stoichiometry: 2.0
species: 899097

953560
type: SpeciesReference
stoichiometry: 1.0
species: 904916

904916
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: protoporphyrin [mitochondrion]

911912
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: HEM15 [mitochondrion]

953548
type: SpeciesReference
stoichiometry: 1.0
species: 900417

900417
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: iron(2+) [mitochondrion]

953572
type: SpeciesReference
stoichiometry: 1.0
species: 898233

898233
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ferroheme b [mitochondrion]

902637
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: Met-tRNA(Met) [mitochondrion]

995434
type: Reaction
reactant: 995458
reactant: 995446
product: 995482
is: SBO:0000176
product: 995470
notes: GENE_ASSOCIATION:(YKL140W or YLL012W)
name: steryl ester hydrolase
modifier: meta s 2629 b r 1015
fast: false
reversible: true
modifier: meta s 2544 b r 1015

995458
type: SpeciesReference
stoichiometry: 1.0
species: 898149

898149
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: fecosterol [lipid particle]

995446
type: SpeciesReference
stoichiometry: 1.0
species: 898077

898077
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: fatty acid [lipid particle]

995482
type: SpeciesReference
stoichiometry: 1.0
species: 899145

995470
type: SpeciesReference
stoichiometry: 1.0
species: 898173

898173
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: fecosterol ester [lipid particle]

917574
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: YEH1 [lipid particle]

916533
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: TGL1 [lipid particle]

895773
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: ceramide-2 (C24) [Golgi]

932232
type: Reaction
reactant: 932268
fast: false
modifier: meta s 2500 b r 0186
modifier: meta s 1857 b r 0186
modifier: meta s 1858 b r 0186
reversible: true
notes: GENE_ASSOCIATION:(YBR145W or YDL168W or YGL256W or YMR303C or YOL086C)
product: 932292
reactant: 932244
product: 932280
modifier: meta s 1860 b r 0186
reactant: 932256
is: SBO:0000176
name: aldehyde dehydrogenase (tryptophol, NAD)
modifier: meta s 1861 b r 0186

932268
type: SpeciesReference
stoichiometry: 1.0
species: 903140

915961
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SFA1 [cytoplasm]

908216
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADH1 [cytoplasm]

908228
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADH2 [cytoplasm]

932292
type: SpeciesReference
stoichiometry: 1.0
species: 906380

906380
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: tryptophol [cytoplasm]

932244
type: SpeciesReference
stoichiometry: 1.0
species: 899037

932280
type: SpeciesReference
stoichiometry: 1.0
species: 903080

908252
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADH4 [cytoplasm]

932256
type: SpeciesReference
stoichiometry: 1.0
species: 899601

908264
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADH5 [cytoplasm]

987363
type: Reaction
reactant: 987399
notes: GENE_ASSOCIATION:YMR300C
fast: false
reactant: 987387
is: SBO:0000176
product: 987423
name: phosphoribosylpyrophosphate amidotransferase
product: 987411
modifier: 987447
reactant: 987375
reversible: true
product: 987435

987399
type: SpeciesReference
stoichiometry: 1.0
species: 904952

987387
type: SpeciesReference
stoichiometry: 1.0
species: 901185

987423
type: SpeciesReference
stoichiometry: 1.0
species: 897369

987411
type: SpeciesReference
stoichiometry: 1.0
species: 894164

894164
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5-phosphoribosylamine [cytoplasm]

908168
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADE4 [cytoplasm]

987375
type: SpeciesReference
stoichiometry: 1.0
species: 899145

987435
type: SpeciesReference
stoichiometry: 1.0
species: 901101

903452
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: nonaprenyl diphosphate [lipid particle]

001769
type: Reaction
is: SBO:0000185
notes: GENE_ASSOCIATION:YNR056C
product: 001817
name: 8-Amino-7-oxononanoate transport
reactant: 001781
product: 001805
modifier: meta s 1942 b r 1104
fast: false
reversible: true
reactant: 001793

001817
type: SpeciesReference
stoichiometry: 1.0
species: 899037

001781
type: SpeciesReference
stoichiometry: 1.0
species: 894440

894440
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: 8-amino-7-oxononanoate [extracellular]

001805
type: SpeciesReference
stoichiometry: 1.0
species: 894428

894428
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 8-amino-7-oxononanoate [cytoplasm]

909236
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: BIO5 [cell envelope]

001793
type: SpeciesReference
stoichiometry: 1.0
species: 899061

891697
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: 1-phosphatidyl-1D-myo-inositol [cell envelope]

908420
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: AKR1 [cytoplasm]

913939
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: MSY1 [mitochondrion]

894969
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: allantoin [extracellular]

896937
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dCMP [cytoplasm]

916260
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: STE14 [endoplasmic reticulum]

909056
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: ATO3 [cell envelope]

906980
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: tRNA(Arg), mitchondrial [mitochondrion]

914167
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: NRK1 [cytoplasm]

891371
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: (S)-3-methyl-2-oxopentanoate [mitochondrion]

907256
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: tRNA(Ser), cytoplasmic [cytoplasm]

910256
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: DTR1 [cell envelope]

964610
type: Reaction
notes: GENE_ASSOCIATION:YDR072C
reactant: 964634
reactant: 964622
product: 964658
name: inositolphosphotransferase
reversible: true
fast: false
modifier: meta s 2244 b r 0582
is: SBO:0000176
product: 964646

964634
type: SpeciesReference
stoichiometry: 1.0
species: 902493

902493
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: mannosylinositol phosphorylceramide C (C24) [Golgi]

964622
type: SpeciesReference
stoichiometry: 1.0
species: 891733

964658
type: SpeciesReference
stoichiometry: 1.0
species: 899901

899901
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: inositol phosphomannosylinositol phosphoceramide C (C24) [Golgi]

912859
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: IPT1 [Golgi]

964646
type: SpeciesReference
stoichiometry: 1.0
species: 897225

955851
type: Reaction
reversible: true
product: 955887
notes: GENE_ASSOCIATION:YDR300C
modifier: 955911
is: SBO:0000176
fast: false
reactant: 955863
product: 955899
name: glutamate 5-kinase
reactant: 955875

955887
type: SpeciesReference
stoichiometry: 1.0
species: 894813

915103
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PRO1 [cytoplasm]

955863
type: SpeciesReference
stoichiometry: 1.0
species: 895269

955899
type: SpeciesReference
stoichiometry: 1.0
species: 901053

901053
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-gamma-glutamyl phosphate [cytoplasm]

955875
type: SpeciesReference
stoichiometry: 1.0
species: 901101

914359
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PAN6 [cytoplasm]

914995
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: PMT5 [endoplasmic reticulum]

908768
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ARG7 [mitochondrion]

943307
type: Reaction
product: 943342
modifier: 943378
reactant: 943318
product: 943366
product: 943354
name: deoxyribokinase
reactant: 943330
is: SBO:0000176
reversible: true
fast: false
notes: GENE_ASSOCIATION:YCR036W

943342
type: SpeciesReference
stoichiometry: 1.0
species: 892422

892422
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-deoxy-D-ribose 5-phosphate [cytoplasm]

915463
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: RBK1 [cytoplasm]

943318
type: SpeciesReference
stoichiometry: 1.0
species: 892410

943366
type: SpeciesReference
stoichiometry: 1.0
species: 899037

943354
type: SpeciesReference
stoichiometry: 1.0
species: 894813

943330
type: SpeciesReference
stoichiometry: 1.0
species: 895269

937103
type: Reaction
notes: GENE_ASSOCIATION:(YDL090C and YKL019W)
product: 937163
reactant: 937127
name: CAAX farnesyltransferase
product: 937139
reversible: true
reactant: 937115
product: 937151
fast: false
is: SBO:0000176
modifier: meta s 2739 b r 0249

937163
type: SpeciesReference
stoichiometry: 1.0
species: 903428

903428
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: nonaprenyl 4-hydroxybenzoate [cytoplasm]

937127
type: SpeciesReference
stoichiometry: 1.0
species: 903440

903440
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: nonaprenyl diphosphate [cytoplasm]

937139
type: SpeciesReference
stoichiometry: 1.0
species: 897369

937115
type: SpeciesReference
stoichiometry: 1.0
species: 893696

893696
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 4-hydroxybenzoate [cytoplasm]

937151
type: SpeciesReference
stoichiometry: 2.0
species: 899037

918896
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: RAM1:RAM2 [cytoplasm]

916997
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TRP5 [cytoplasm]

009128
type: Reaction
modifier: meta s 2609 b r 1212
notes: GENE_ASSOCIATION:(YBR293W or YCL069W or YMR088C)
product: 009176
reversible: true
modifier: meta s 2610 b r 1212
name: L-lysine transport
is: SBO:0000185
reactant: 009152
product: 009164
modifier: meta s 2611 b r 1212
fast: false
reactant: 009140

917334
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 16
name: VBA1 [vacuolar membrane]

009176
type: SpeciesReference
stoichiometry: 1.0
species: 901497

901497
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: L-lysine [vacuole]

917346
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 16
name: VBA2 [vacuolar membrane]

009152
type: SpeciesReference
stoichiometry: 1.0
species: 901461

901461
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-lysine [cytoplasm]

009164
type: SpeciesReference
stoichiometry: 1.0
species: 899037

917358
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 16
name: VBA3 [vacuolar membrane]

009140
type: SpeciesReference
stoichiometry: 1.0
species: 899133

927875
type: Reaction
reversible: true
modifier: 927935
is: SBO:0000176
reactant: 927887
fast: false
product: 927923
notes: GENE_ASSOCIATION:YGL205W
name: acyl-CoA oxidase (octadecanoyl-CoA)
reactant: 927899
product: 927911

915067
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: POX1 [peroxisome]

927887
type: SpeciesReference
stoichiometry: 1.0
species: 903884

927923
type: SpeciesReference
stoichiometry: 1.0
species: 906260

906260
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: trans-octadec-2-enoyl-CoA [peroxisome]

927899
type: SpeciesReference
stoichiometry: 1.0
species: 905744

905744
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: stearoyl-CoA [peroxisome]

927911
type: SpeciesReference
stoichiometry: 1.0
species: 899493

915753
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SAH1 [cytoplasm]

900057
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: inositol-P-ceramide A (C24) [mitochondrion]

892482
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-hydroxy-3-oxobutyl phosphate [cytoplasm]

918727
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MAK10:MAK3:MAK31 [cytoplasm]

995818
type: Reaction
name: succinate dehydrogenase (ubiquinone-6)
reversible: true
product: 995866
reactant: 995830
notes: GENE_ASSOCIATION:((YDR178W and YJL045W and YKL141W and YLL041C) or (YDR178W and YKL141W and YKL148C and YLL041C))
fast: false
modifier: meta s 2749 b r 1021
product: 995854
reactant: 995842
modifier: meta s 2750 b r 1021
is: SBO:0000176

995866
type: SpeciesReference
stoichiometry: 1.0
species: 906440

995830
type: SpeciesReference
stoichiometry: 1.0
species: 905768

905768
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: succinate [mitochondrion]

919016
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: SDH1:SDH2:SDH3:SDH4 [mitochondrion]

995854
type: SpeciesReference
stoichiometry: 1.0
species: 898389

898389
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: fumarate [mitochondrion]

995842
type: SpeciesReference
stoichiometry: 1.0
species: 906452

919028
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: SDH2:SDH3:SDH4:YJL045W [mitochondrion]

954016
type: Reaction
modifier: meta s 2277 b r 0441
reactant: 954028
is: SBO:0000176
name: FMN reductase
reversible: true
fast: false
notes: GENE_ASSOCIATION:YLR011W
reactant: 954040
reactant: 954052
product: 954064
product: 954076

913255
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: LOT6 [cytoplasm]

954028
type: SpeciesReference
stoichiometry: 1.0
species: 898257

954040
type: SpeciesReference
stoichiometry: 1.0
species: 899037

954052
type: SpeciesReference
stoichiometry: 1.0
species: 903140

954064
type: SpeciesReference
stoichiometry: 1.0
species: 898293

954076
type: SpeciesReference
stoichiometry: 1.0
species: 903080

950320
type: Reaction
product: 950380
modifier: 950428
modifier: 950404
reactant: 950332
product: 950368
name: fatty-acid--CoA ligase (octadecanoate)
product: 950392
modifier: 950416
reversible: true
reactant: 950344
reactant: 950356
is: SBO:0000176
fast: false
notes: GENE_ASSOCIATION:(YIL009W or YMR246W or YOR317W)

950380
type: SpeciesReference
stoichiometry: 1.0
species: 897369

950332
type: SpeciesReference
stoichiometry: 1.0
species: 895269

950368
type: SpeciesReference
stoichiometry: 1.0
species: 895137

950392
type: SpeciesReference
stoichiometry: 1.0
species: 905732

905732
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: stearoyl-CoA [cytoplasm]

950344
type: SpeciesReference
stoichiometry: 1.0
species: 896313

950356
type: SpeciesReference
stoichiometry: 1.0
species: 905684

905684
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: stearate [cytoplasm]

004973
type: Reaction
modifier: 005009
product: 004997
reactant: 004985
notes: GENE_ASSOCIATION:YBR041W
is: SBO:0000185
fast: false
reversible: true
name: fatty acid transport

910736
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 14
name: FAT1 [peroxisomal membrane]

meta c 14
type: Compartment
is: GO:0005778
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: peroxisomal membrane

004997
type: SpeciesReference
stoichiometry: 1.0
species: 896061

896061
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: cerotate [peroxisome]

004985
type: SpeciesReference
stoichiometry: 1.0
species: 896049

896049
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: cerotate [cytoplasm]

911984
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: HFA1 [mitochondrion]

980260
type: Reaction
product: 980308
reactant: 980272
reactant: 980284
notes: GENE_ASSOCIATION:YER005W
is: SBO:0000176
fast: false
modifier: meta s 2640 b r 0809
product: 980320
name: nucleoside triphosphatase
reversible: true
product: 980296

980308
type: SpeciesReference
stoichiometry: 1.0
species: 899037

980272
type: SpeciesReference
stoichiometry: 1.0
species: 895269

980284
type: SpeciesReference
stoichiometry: 1.0
species: 899145

980320
type: SpeciesReference
stoichiometry: 1.0
species: 904256

980296
type: SpeciesReference
stoichiometry: 1.0
species: 894813

910820
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: FCY2 [cell envelope]

995170
type: Reaction
product: 995218
name: squalene synthase
reversible: true
notes: GENE_ASSOCIATION:YHR190W
product: 995230
is: SBO:0000176
fast: false
reactant: 995182
modifier: 995254
product: 995242
reactant: 995206
reactant: 995194

995218
type: SpeciesReference
stoichiometry: 2.0
species: 897369

995230
type: SpeciesReference
stoichiometry: 1.0
species: 903188

995182
type: SpeciesReference
stoichiometry: 2.0
species: 892785

892785
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-trans,6-trans-farnesyl diphosphate [cytoplasm]

910604
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ERG9 [cytoplasm]

995242
type: SpeciesReference
stoichiometry: 1.0
species: 905660

905660
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: squalene [cytoplasm]

995206
type: SpeciesReference
stoichiometry: 1.0
species: 903236

995194
type: SpeciesReference
stoichiometry: 1.0
species: 899037

980176
type: Reaction
product: 980212
notes: GENE_ASSOCIATION:YER005W
name: nucleoside triphosphatase
product: 980236
reactant: 980188
reactant: 980200
is: SBO:0000176
reversible: true
fast: false
product: 980224
modifier: 980248

980212
type: SpeciesReference
stoichiometry: 1.0
species: 897525

897525
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dTDP [cytoplasm]

980236
type: SpeciesReference
stoichiometry: 1.0
species: 904256

980188
type: SpeciesReference
stoichiometry: 1.0
species: 897561

897561
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dTTP [cytoplasm]

980200
type: SpeciesReference
stoichiometry: 1.0
species: 899145

980224
type: SpeciesReference
stoichiometry: 1.0
species: 899037

898701
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: glycan G13045 [endoplasmic reticulum]

900969
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-citrulline [cytoplasm]

891588
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 1-(sn-glycero-3-phospho)-1D-myo-inositol [cytoplasm]

917586
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: YEH2 [cell envelope]

953824
type: Reaction
reactant: 953848
reversible: true
notes: GENE_ASSOCIATION:((Q0105 and YBL045C and YDR529C and YEL024W and YEL039C and YFR033C and YGR183C and YHR001W-A and YJL166W and YOR065W and YPR191W) or (Q0105 and YBL045C and YDR529C and YEL024W and YFR033C and YGR183C and YHR001W-A and YJL166W and YJR048W and YOR065W and YPR191W))
modifier: 953920
modifier: 953908
fast: false
product: 953896
is: SBO:0000176
name: ferrocytochrome-c:oxygen oxidoreductase
reactant: 953860
product: 953884
product: 953872
reactant: 953836

953848
type: SpeciesReference
stoichiometry: 1.5
species: 899097

918018
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: COB:COR1:CYC7:CYT1:QCR10:QCR2:QCR6:QCR7:QCR8:QCR9:RIP1 [mitochondrial membrane]

918006
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: COB:COR1:CYC1:CYT1:QCR10:QCR2:QCR6:QCR7:QCR8:QCR9:RIP1 [mitochondrial membrane]

953896
type: SpeciesReference
stoichiometry: 1.0
species: 906452

953860
type: SpeciesReference
stoichiometry: 1.0
species: 906440

953884
type: SpeciesReference
stoichiometry: 1.5
species: 899037

953872
type: SpeciesReference
stoichiometry: 2.0
species: 898221

898221
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ferrocytochrome c [mitochondrion]

953836
type: SpeciesReference
stoichiometry: 2.0
species: 898209

898209
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ferricytochrome c [mitochondrion]

913123
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: LAP2 [nucleus]

917778
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: YUR1 [Golgi]

910148
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: DNF1 [cell envelope]

897309
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: dihydrolipoylprotein [mitochondrion]

913951
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MTD1 [cytoplasm]

950128
type: Reaction
is: SBO:0000176
product: 950188
reactant: 950140
name: fatty-acid--CoA ligase (n-C24:0)
modifier: 950212
reversible: true
fast: false
notes: GENE_ASSOCIATION:YBR041W
reactant: 950152
product: 950200
reactant: 950164
product: 950176

950188
type: SpeciesReference
stoichiometry: 1.0
species: 897429

950140
type: SpeciesReference
stoichiometry: 1.0
species: 895329

950152
type: SpeciesReference
stoichiometry: 1.0
species: 896373

950200
type: SpeciesReference
stoichiometry: 1.0
species: 905972

905972
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: tetracosanoyl-CoA [peroxisome]

950164
type: SpeciesReference
stoichiometry: 1.0
species: 902085

902085
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: lignoceric acid [peroxisome]

950176
type: SpeciesReference
stoichiometry: 1.0
species: 895173

907724
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: palmitoylated Ras protein [endoplasmic reticulum]

915211
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: protein with N-terminal(Met-Leu) [cytoplasm]

911792
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: GUP1 [cell envelope]

916815
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TPI1 [cytoplasm]

897261
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: diglyceride [nucleus]

897093
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: Delta(6)-trans,Delta(8)-cis-leukotriene B4 [nucleus]

977884
type: Reaction
product: 977932
reversible: true
is: SBO:0000176
name: NatC acetylation
reactant: 977908
notes: GENE_ASSOCIATION:(YCR020C-A and YEL053C and YPR051W)
fast: false
reactant: 977896
modifier: meta s 2725 b r 0777
product: 977920

977932
type: SpeciesReference
stoichiometry: 1.0
species: 907520

907520
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: acetylated protein with terminal(Met-Ile) [cytoplasm]

977908
type: SpeciesReference
stoichiometry: 1.0
species: 915199

915199
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: protein with N-terminal(Met-Ile) [cytoplasm]

977896
type: SpeciesReference
stoichiometry: 1.0
species: 894597

977920
type: SpeciesReference
stoichiometry: 1.0
species: 896313

912823
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: INP54 [endoplasmic reticulum]

901257
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-histidine [cytoplasm]

907292
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: tRNA(Trp), cytoplasmic [cytoplasm]

894020
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5-aminolevulinate [cytoplasm]

910868
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: FEN1 [lipid particle]

011084
type: Reaction
name: oxaloacetate transport
product: 011132
modifier: 011144
reactant: 011096
product: 011120
notes: GENE_ASSOCIATION:YKL120W
reversible: true
fast: false
is: SBO:0000185
reactant: 011108

011132
type: SpeciesReference
stoichiometry: 1.0
species: 903824

914227
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: OAC1 [mitochondrial membrane]

011096
type: SpeciesReference
stoichiometry: 1.0
species: 899037

011120
type: SpeciesReference
stoichiometry: 1.0
species: 899097

011108
type: SpeciesReference
stoichiometry: 1.0
species: 903812

903812
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: oxaloacetate(2-) [cytoplasm]

912235
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: HST3 [nucleus]

964310
type: Reaction
is: SBO:0000176
product: 964358
name: inositolphosphotransferase
product: 964346
reactant: 964334
fast: false
modifier: meta s 2244 b r 0577
reactant: 964322
notes: GENE_ASSOCIATION:YDR072C
reversible: true

964358
type: SpeciesReference
stoichiometry: 1.0
species: 899721

964346
type: SpeciesReference
stoichiometry: 1.0
species: 897225

964334
type: SpeciesReference
stoichiometry: 1.0
species: 902313

902313
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: mannosylinositol phosphorylceramide A (C26) [Golgi]

964322
type: SpeciesReference
stoichiometry: 1.0
species: 891733

905624
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: spermine [vacuole]

890961
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (N(omega)-L-arginino)succinic acid [cytoplasm]

908696
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ARE2 [endoplasmic reticulum]

970918
type: Reaction
product: 970957
reactant: 970931
reversible: true
name: L-asparaginase
is: SBO:0000176
notes: GENE_ASSOCIATION:(YLR155C or YLR157C or YLR158C or YLR160C)
modifier: meta s 1921 b r 0680
reactant: 970944
fast: false
modifier: meta s 1919 b r 0680
product: 970970
modifier: meta s 1918 b r 0680
modifier: meta s 1920 b r 0680

970957
type: SpeciesReference
stoichiometry: 1.0
species: 895101

895101
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: ammonium [extracellular]

970931
type: SpeciesReference
stoichiometry: 1.0
species: 899169

908984
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: ASP3-4 [extracellular]

970944
type: SpeciesReference
stoichiometry: 1.0
species: 900861

908960
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: ASP3-2 [extracellular]

970970
type: SpeciesReference
stoichiometry: 1.0
species: 900909

900909
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: L-aspartate [extracellular]

908948
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: ASP3-1 [extracellular]

908972
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: ASP3-3 [extracellular]

968870
type: Reaction
is: SBO:0000176
reactant: 968882
reactant: 968894
product: 968906
product: 968918
fast: false
name: IPS phospholipase C
reversible: true
notes: GENE_ASSOCIATION:YER019W
modifier: meta s 2245 b r 0653

968882
type: SpeciesReference
stoichiometry: 1.0
species: 899157

968894
type: SpeciesReference
stoichiometry: 1.0
species: 900285

900285
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: inositol-P-ceramide C (C26) [endoplasmic reticulum]

968906
type: SpeciesReference
stoichiometry: 1.0
species: 892168

968918
type: SpeciesReference
stoichiometry: 1.0
species: 895941

895941
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ceramide-3 (C26) [endoplasmic reticulum]

008084
type: Reaction
notes: GENE_ASSOCIATION:YJR001W
is: SBO:0000185
reversible: true
name: L-glutamine transport
fast: false
product: 008120
reactant: 008096
reactant: 008108
product: 008132
modifier: meta s 1929 b r 1197

008120
type: SpeciesReference
stoichiometry: 1.0
species: 899037

008096
type: SpeciesReference
stoichiometry: 1.0
species: 899133

008108
type: SpeciesReference
stoichiometry: 1.0
species: 901185

008132
type: SpeciesReference
stoichiometry: 1.0
species: 901209

909080
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 16
name: AVT1 [vacuolar membrane]

002861
type: Reaction
is: SBO:0000185
fast: false
product: 002897
product: 002909
reactant: 002873
reversible: true
notes: GENE_ASSOCIATION:YOR100C
name: carnithine-acetylcarnithine carrier
reactant: 002885
modifier: 002921

002897
type: SpeciesReference
stoichiometry: 1.0
species: 891033

891033
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (R)-carnitine [cytoplasm]

002909
type: SpeciesReference
stoichiometry: 1.0
species: 903500

903500
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: O-acetylcarnitine [mitochondrion]

002873
type: SpeciesReference
stoichiometry: 1.0
species: 891057

891057
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: (R)-carnitine [mitochondrion]

002885
type: SpeciesReference
stoichiometry: 1.0
species: 903488

903488
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: O-acetylcarnitine [cytoplasm]

909812
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: CRC1 [mitochondrial membrane]

936995
type: Reaction
modifier: meta s 2523 b r 0246
product: 937019
reactant: 937007
notes: GENE_ASSOCIATION:YDR410C
is: SBO:0000176
fast: false
reversible: true
name: C-terminal processing of farnesylated proteins II

937019
type: SpeciesReference
stoichiometry: 1.0
species: 907592

907592
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: farnesylated protein with methylated C-terminal [endoplasmic reticulum]

937007
type: SpeciesReference
stoichiometry: 1.0
species: 907580

907580
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: farnesylated protein with hydroxyl C-terminal [endoplasmic reticulum]

928079
type: Reaction
modifier: meta s 1896 b r 0127
notes: GENE_ASSOCIATION:(YCR048W or YNR019W)
name: acyl-CoA:sterol acyltransferase
reactant: 928103
reversible: true
fast: false
is: SBO:0000176
product: 928127
modifier: meta s 1897 b r 0127
reactant: 928091
product: 928115

908684
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ARE1 [endoplasmic reticulum]

928103
type: SpeciesReference
stoichiometry: 1.0
species: 903728

903728
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: oleoyl-CoA [endoplasmic reticulum]

928127
type: SpeciesReference
stoichiometry: 1.0
species: 897825

897825
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ergosteryl oleate [endoplasmic reticulum]

928091
type: SpeciesReference
stoichiometry: 1.0
species: 897753

897753
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ergosterol [endoplasmic reticulum]

928115
type: SpeciesReference
stoichiometry: 1.0
species: 896325

913843
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: MSF1 [mitochondrion]

896841
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: D-xylulose 5-phosphate [cytoplasm]

922714
type: Reaction
notes: GENE_ASSOCIATION:YKR009C
product: 922774
product: 922762
reversible: true
is: SBO:0000176
reactant: 922726
name: 3-hydroxyacyl-CoA dehydrogenase (3-oxodecanoyl-CoA)
fast: false
reactant: 922750
reactant: 922738
modifier: 922786

922774
type: SpeciesReference
stoichiometry: 1.0
species: 903128

922762
type: SpeciesReference
stoichiometry: 1.0
species: 891263

891263
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: (S)-3-hydroxydecanoyl-CoA [peroxisome]

922726
type: SpeciesReference
stoichiometry: 1.0
species: 893264

893264
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: 3-oxodecanoyl-CoA [peroxisome]

922750
type: SpeciesReference
stoichiometry: 1.0
species: 903176

922738
type: SpeciesReference
stoichiometry: 1.0
species: 899121

911024
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: FOX2 [peroxisome]

981580
type: Reaction
notes: GENE_ASSOCIATION:(YDR148C and YFL018C and YIL125W)
reactant: 981592
reactant: 981616
product: 981640
reactant: 981604
modifier: meta s 2717 b r 0832
fast: false
product: 981628
name: oxoglutarate dehydrogenase (lipoamide)
reversible: true
is: SBO:0000176

981592
type: SpeciesReference
stoichiometry: 1.0
species: 892701

981616
type: SpeciesReference
stoichiometry: 1.0
species: 902109

902109
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: lipoamide [mitochondrion]

981640
type: SpeciesReference
stoichiometry: 1.0
species: 905240

905240
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: S(8)-succinyldihydrolipoamide [mitochondrion]

981604
type: SpeciesReference
stoichiometry: 1.0
species: 899097

918631
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: KGD1:KGD2:LPD1 [mitochondrion]

981628
type: SpeciesReference
stoichiometry: 1.0
species: 895521

972820
type: Reaction
notes: GENE_ASSOCIATION:YDR503C
product: 972880
modifier: meta s 2278 b r 0709
reactant: 972832
product: 972856
fast: false
product: 972868
reversible: true
reactant: 972844
name: lipid phosphate phosphatase
is: SBO:0000176

972880
type: SpeciesReference
stoichiometry: 1.0
species: 904340

904340
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: phosphatidate [cell envelope]

913267
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: LPP1 [cell envelope]

972832
type: SpeciesReference
stoichiometry: 1.0
species: 891504

891504
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: 1,2-diacylglycerol 3-diphosphate [cell envelope]

972856
type: SpeciesReference
stoichiometry: 2.0
species: 899025

972868
type: SpeciesReference
stoichiometry: 1.0
species: 904256

972844
type: SpeciesReference
stoichiometry: 1.0
species: 899145

901149
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: L-glutamate [vacuole]

969842
type: Reaction
modifier: 969878
product: 969866
reactant: 969854
notes: GENE_ASSOCIATION:YPL117C
is: SBO:0000176
fast: false
reversible: true
name: isopentenyl-diphosphate D-isomerase

912559
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: IDI1 [cytoplasm]

969866
type: SpeciesReference
stoichiometry: 1.0
species: 904856

904856
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: prenyl diphosphate [cytoplasm]

969854
type: SpeciesReference
stoichiometry: 1.0
species: 900585

900585
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: isopentenyl diphosphate [cytoplasm]

914071
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: NMA1 [nucleus]

896925
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: dCDP [nucleus]

895449
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: biotinyl-5'-AMP [cytoplasm]

969758
type: Reaction
reactant: 969770
fast: false
product: 969830
product: 969806
reactant: 969794
modifier: meta s 2247 b r 0666
reversible: true
notes: GENE_ASSOCIATION:YPL040C
product: 969818
name: isoleucyl-tRNA synthetase
reactant: 969782
is: SBO:0000176

969770
type: SpeciesReference
stoichiometry: 1.0
species: 895305

969830
type: SpeciesReference
stoichiometry: 1.0
species: 899577

899577
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: Ile-tRNA(Ile) [mitochondrion]

969806
type: SpeciesReference
stoichiometry: 1.0
species: 895149

895149
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: AMP [mitochondrion]

969794
type: SpeciesReference
stoichiometry: 1.0
species: 907136

907136
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: tRNA(Ile), mitchondrial [mitochondrion]

912895
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ISM1 [mitochondrion]

969818
type: SpeciesReference
stoichiometry: 1.0
species: 897405

897405
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: diphosphate [mitochondrion]

969782
type: SpeciesReference
stoichiometry: 1.0
species: 901377

901377
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: L-isoleucine [mitochondrion]

967370
type: Reaction
product: 967418
fast: false
product: 967406
is: SBO:0000176
reversible: true
reactant: 967382
modifier: meta s 2246 b r 0628
reactant: 967394
notes: GENE_ASSOCIATION:YER019W
name: IPS phospholipase C

967418
type: SpeciesReference
stoichiometry: 1.0
species: 902253

902253
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: mannose-1D-myo-inositol 1-phosphate [mitochondrion]

967406
type: SpeciesReference
stoichiometry: 1.0
species: 895857

967382
type: SpeciesReference
stoichiometry: 1.0
species: 899193

967394
type: SpeciesReference
stoichiometry: 1.0
species: 902433

902433
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: mannosylinositol phosphorylceramide B' (C24) [mitochondrion]

938495
type: Reaction
reactant: 938519
modifier: meta s 2489 b r 0267
reversible: true
product: 938555
reactant: 938531
is: SBO:0000176
name: ceramide-3 synthase (24C)
fast: false
reactant: 938507
product: 938579
notes: GENE_ASSOCIATION:YMR272C
product: 938567
reactant: 938543

938519
type: SpeciesReference
stoichiometry: 1.0
species: 899049

915818
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: SCS7 [endoplasmic reticulum]

938555
type: SpeciesReference
stoichiometry: 1.0
species: 895905

895905
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ceramide-3 (C24) [endoplasmic reticulum]

938531
type: SpeciesReference
stoichiometry: 1.0
species: 903248

938507
type: SpeciesReference
stoichiometry: 1.0
species: 895761

938579
type: SpeciesReference
stoichiometry: 1.0
species: 903200

938567
type: SpeciesReference
stoichiometry: 1.0
species: 899157

938543
type: SpeciesReference
stoichiometry: 1.0
species: 903860

903860
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: oxygen [endoplasmic reticulum]

928019
type: Reaction
reactant: 928031
modifier: meta s 1896 b r 0126
notes: GENE_ASSOCIATION:YCR048W
fast: false
reactant: 928043
name: acyl-CoA:sterol acyltransferase
product: 928067
product: 928055
reversible: true
is: SBO:0000176

928031
type: SpeciesReference
stoichiometry: 1.0
species: 897645

928043
type: SpeciesReference
stoichiometry: 1.0
species: 903728

928067
type: SpeciesReference
stoichiometry: 1.0
species: 897669

897669
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: episteryl oleate [endoplasmic reticulum]

928055
type: SpeciesReference
stoichiometry: 1.0
species: 896325

894104
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5-methyltetrahydrofolate(2-) [cytoplasm]

953140
type: Reaction
reactant: 953188
notes: GENE_ASSOCIATION:(YGR037C and YKL182W and YNR016C and YPL231W)
reversible: true
product: 953236
product: 953248
reactant: 953164
reactant: 953152
product: 953200
product: 953212
fast: false
is: SBO:0000176
product: 953224
reactant: 953176
modifier: 953260
name: fatty-acyl-CoA synthase (n-C14:0CoA)

953188
type: SpeciesReference
stoichiometry: 2.0
species: 903236

953236
type: SpeciesReference
stoichiometry: 1.0
species: 902841

902841
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: myristoyl-CoA [cytoplasm]

953248
type: SpeciesReference
stoichiometry: 2.0
species: 903188

953164
type: SpeciesReference
stoichiometry: 1.0
species: 901965

901965
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: lauroyl-CoA [cytoplasm]

953152
type: SpeciesReference
stoichiometry: 3.0
species: 899037

953200
type: SpeciesReference
stoichiometry: 1.0
species: 895485

953212
type: SpeciesReference
stoichiometry: 1.0
species: 896313

953224
type: SpeciesReference
stoichiometry: 1.0
species: 899145

953176
type: SpeciesReference
stoichiometry: 1.0
species: 902157

902157
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: malonyl-CoA [cytoplasm]

917802
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ACB1:ACC1:FAS1:FAS2 [cytoplasm]

913147
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: LCB4 [endoplasmic reticulum]

959223
type: Reaction
reversible: true
product: 959271
modifier: 959295
notes: GENE_ASSOCIATION:(YAL044C and YDR019C and YFL018C and YMR189W)
reactant: 959235
product: 959283
is: SBO:0000176
fast: false
product: 959259
name: glycine-cleavage system (lipoamide)
reactant: 959247

959271
type: SpeciesReference
stoichiometry: 1.0
species: 895113

959235
type: SpeciesReference
stoichiometry: 1.0
species: 905216

905216
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: S(8)-aminomethyldihydrolipoamide [mitochondrion]

959283
type: SpeciesReference
stoichiometry: 1.0
species: 897297

897297
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: dihydrolipoamide [mitochondrion]

959259
type: SpeciesReference
stoichiometry: 1.0
species: 893924

959247
type: SpeciesReference
stoichiometry: 1.0
species: 906044

894296
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 6-O-{alpha-D-mannosyl-(1->6)-2-O-[(2-aminoethyl)phosphoryl]-alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl}-O-acyl-1-phosphatidyl-1D-myo-inositol [endoplasmic reticulum]

905516
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: sn-glycero-3-phosphocholine [endoplasmic reticulum]

908588
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 14
name: ANT1 [peroxisomal membrane]

908756
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ARG5,6 [mitochondrion]

916351
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: SUL1 [cell envelope]

959139
type: Reaction
fast: false
name: glycine-cleavage complex (lipoylprotein)
notes: GENE_ASSOCIATION:(YAL044C and YDR019C and YFL018C and YMR189W)
modifier: 959211
reactant: 959151
reversible: true
product: 959187
product: 959175
is: SBO:0000176
reactant: 959163
product: 959199

959151
type: SpeciesReference
stoichiometry: 1.0
species: 897309

959187
type: SpeciesReference
stoichiometry: 1.0
species: 902121

902121
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: lipoylprotein [mitochondrion]

959175
type: SpeciesReference
stoichiometry: 1.0
species: 899097

959163
type: SpeciesReference
stoichiometry: 1.0
species: 903104

959199
type: SpeciesReference
stoichiometry: 1.0
species: 903164

905708
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: stearoyl-ACP [cytoplasm]

901905
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: lanosteryl palmitoleate [endoplasmic reticulum]

898977
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: guanine [extracellular]

957135
type: Reaction
product: 957183
fast: false
name: glutathione peridoxase
reactant: 957159
reactant: 957147
modifier: 957219
notes: GENE_ASSOCIATION:(YBR244W or YCL035C or YDR513W or YIR037W or YKL026C)
product: 957171
modifier: 957243
modifier: 957231
is: SBO:0000176
modifier: 957195
modifier: 957207
reversible: true

957183
type: SpeciesReference
stoichiometry: 2.0
species: 899145

957159
type: SpeciesReference
stoichiometry: 1.0
species: 899457

899457
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: hydrogen peroxide [cytoplasm]

957147
type: SpeciesReference
stoichiometry: 2.0
species: 898569

898569
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: glutathione [cytoplasm]

911684
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GRX1 [cytoplasm]

957171
type: SpeciesReference
stoichiometry: 1.0
species: 898617

898617
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: glutathione disulfide [cytoplasm]

912511
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HYR1 [cytoplasm]

911624
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GPX2 [cytoplasm]

900873
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: L-asparagine [mitochondrion]

891492
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: (Z)-tetradec-7-enoyl-ACP [mitochondrion]

917490
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 16
name: YBT1 [vacuolar membrane]

906656
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: urea-1-carboxylic acid [cytoplasm]

979288
type: Reaction
notes: GENE_ASSOCIATION:YKL067W
is: SBO:0000176
reactant: 979300
product: 979324
modifier: 979348
reversible: true
product: 979336
name: nucleoside diphosphate kinase
reactant: 979312
fast: false

979300
type: SpeciesReference
stoichiometry: 1.0
species: 895269

979324
type: SpeciesReference
stoichiometry: 1.0
species: 894813

917718
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: YNK1 [cytoplasm]

979336
type: SpeciesReference
stoichiometry: 1.0
species: 896901

979312
type: SpeciesReference
stoichiometry: 1.0
species: 896853

934380
type: Reaction
name: aspartate carbamoyltransferase
reversible: true
product: 934416
notes: GENE_ASSOCIATION:YJL130C
modifier: 934452
reactant: 934392
fast: false
product: 934440
product: 934428
is: SBO:0000176
reactant: 934404

934416
type: SpeciesReference
stoichiometry: 1.0
species: 899037

917153
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: URA2 [cytoplasm]

934392
type: SpeciesReference
stoichiometry: 1.0
species: 895473

895473
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: carbamoyl phosphate [cytoplasm]

934440
type: SpeciesReference
stoichiometry: 1.0
species: 904256

934428
type: SpeciesReference
stoichiometry: 1.0
species: 903033

903033
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: N-carbamoyl-L-aspartate [cytoplasm]

934404
type: SpeciesReference
stoichiometry: 1.0
species: 900897

917682
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: YMR1 [cytoplasm]

978880
type: Reaction
reactant: 978892
is: SBO:0000176
name: nucleoside diphosphatase
product: 978940
modifier: 978952
fast: false
notes: GENE_ASSOCIATION:YEL042W
product: 978916
product: 978928
reactant: 978904
reversible: true

978892
type: SpeciesReference
stoichiometry: 1.0
species: 899181

899181
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: H2O [Golgi]

978940
type: SpeciesReference
stoichiometry: 1.0
species: 906560

906560
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: UMP [Golgi]

911204
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: GDA1 [Golgi]

978916
type: SpeciesReference
stoichiometry: 1.0
species: 899073

899073
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: H+ [Golgi]

978928
type: SpeciesReference
stoichiometry: 1.0
species: 904292

904292
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: phosphate [Golgi]

978904
type: SpeciesReference
stoichiometry: 1.0
species: 906476

906476
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: UDP [Golgi]

918848
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PRS2:PRS5 [cytoplasm]

974513
type: Reaction
is: SBO:0000176
reversible: true
reactant: 974525
fast: false
name: methylenetetrahydrofolate dehydrogenase (NAD)
modifier: 974573
reactant: 974537
product: 974549
notes: GENE_ASSOCIATION:YKR080W
product: 974561

974525
type: SpeciesReference
stoichiometry: 1.0
species: 893912

893912
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5,10-methylenetetrahydrofolate(2-) [cytoplasm]

974537
type: SpeciesReference
stoichiometry: 1.0
species: 903080

974549
type: SpeciesReference
stoichiometry: 1.0
species: 893888

893888
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5,10-methenyl-THF [cytoplasm]

974561
type: SpeciesReference
stoichiometry: 1.0
species: 903140

918655
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: LAG1:LIP1 [endoplasmic reticulum]

919679
type: Reaction
modifier: meta s 1881 b r 0008
reversible: true
notes: GENE_ASSOCIATION:YOR175C
product: 919739
reactant: 919691
product: 919715
product: 919727
name: 1-acyl-sn-gylcerol-3-phosphate acyltransferase
reactant: 919703
is: SBO:0000176
fast: false

908504
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ALE1 [endoplasmic reticulum]

919739
type: SpeciesReference
stoichiometry: 1.0
species: 904364

904364
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: phosphatidate [endoplasmic reticulum]

919691
type: SpeciesReference
stoichiometry: 1.0
species: 891612

891612
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 1-acyl-sn-glycerol 3-phosphate [endoplasmic reticulum]

919715
type: SpeciesReference
stoichiometry: 1.0
species: 896325

919727
type: SpeciesReference
stoichiometry: 4.0
species: 899049

919703
type: SpeciesReference
stoichiometry: 1.0
species: 894645

894645
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: acyl-CoA [endoplasmic reticulum]

919907
type: Reaction
name: 1-phosphatidylinositol-3-phosphate 5-kinase
reactant: 919931
modifier: 919967
product: 919955
is: SBO:0000176
product: 919943
notes: GENE_ASSOCIATION:YFR019W
reversible: true
reactant: 919919
fast: false

919931
type: SpeciesReference
stoichiometry: 1.0
species: 895269

919955
type: SpeciesReference
stoichiometry: 1.0
species: 894813

919943
type: SpeciesReference
stoichiometry: 1.0
species: 891781

919919
type: SpeciesReference
stoichiometry: 1.0
species: 891842

942191
type: Reaction
is: SBO:0000176
reactant: 942227
modifier: 942263
product: 942251
name: cytosine deaminase
reactant: 942203
notes: GENE_ASSOCIATION:YPR062W
reversible: true
product: 942239
fast: false
reactant: 942215

942227
type: SpeciesReference
stoichiometry: 1.0
species: 899145

910808
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FCY1 [cytoplasm]

942251
type: SpeciesReference
stoichiometry: 1.0
species: 906608

906608
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: uracil [cytoplasm]

942203
type: SpeciesReference
stoichiometry: 1.0
species: 896469

896469
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: cytosine [cytoplasm]

942239
type: SpeciesReference
stoichiometry: 1.0
species: 895089

942215
type: SpeciesReference
stoichiometry: 1.0
species: 899037

936120
type: Reaction
product: 936168
reversible: true
product: 936179
reactant: 936132
modifier: 936191
reactant: 936156
name: C-3 sterol keto reductase (4-methylzymosterol)
is: SBO:0000176
fast: false
reactant: 936144
notes: GENE_ASSOCIATION:YLR100W

936168
type: SpeciesReference
stoichiometry: 1.0
species: 893792

893792
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 4alpha-methylzymosterol [cytoplasm]

936179
type: SpeciesReference
stoichiometry: 1.0
species: 903188

936132
type: SpeciesReference
stoichiometry: 1.0
species: 892977

892977
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3-dehydro-4-methylzymosterol [cytoplasm]

910532
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ERG27 [cytoplasm]

936156
type: SpeciesReference
stoichiometry: 1.0
species: 903236

936144
type: SpeciesReference
stoichiometry: 1.0
species: 899037

008372
type: Reaction
modifier: 008432
is: SBO:0000185
name: L-histidine transport
modifier: 008444
notes: GENE_ASSOCIATION:(YBR069C or YGR191W or YKR039W)
modifier: 008456
product: 008420
fast: false
reactant: 008384
reactant: 008396
product: 008408
reversible: true

911996
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HIP1 [cell envelope]

008420
type: SpeciesReference
stoichiometry: 1.0
species: 901257

008384
type: SpeciesReference
stoichiometry: 1.0
species: 899061

008396
type: SpeciesReference
stoichiometry: 1.0
species: 901269

901269
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: L-histidine [extracellular]

008408
type: SpeciesReference
stoichiometry: 1.0
species: 899037

974429
type: Reaction
is: SBO:0000176
reactant: 974453
name: methionyl-tRNA synthetase
notes: GENE_ASSOCIATION:YGR171C
fast: false
reactant: 974441
reversible: true
product: 974477
product: 974501
reactant: 974465
modifier: meta s 2328 b r 0730
product: 974489

974453
type: SpeciesReference
stoichiometry: 1.0
species: 901533

901533
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: L-methionine [mitochondrion]

974441
type: SpeciesReference
stoichiometry: 1.0
species: 895305

974477
type: SpeciesReference
stoichiometry: 1.0
species: 895149

974501
type: SpeciesReference
stoichiometry: 1.0
species: 902637

974465
type: SpeciesReference
stoichiometry: 1.0
species: 907208

907208
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: tRNA(Met), mitchondrial [mitochondrion]

913867
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: MSM1 [mitochondrion]

974489
type: SpeciesReference
stoichiometry: 1.0
species: 897405

965990
type: Reaction
name: IPS phospholipase C
reversible: true
notes: GENE_ASSOCIATION:YER019W
product: 966026
modifier: meta s 2245 b r 0605
is: SBO:0000176
product: 966038
fast: false
reactant: 966002
reactant: 966014

966026
type: SpeciesReference
stoichiometry: 1.0
species: 896013

966038
type: SpeciesReference
stoichiometry: 1.0
species: 902241

966002
type: SpeciesReference
stoichiometry: 1.0
species: 899157

966014
type: SpeciesReference
stoichiometry: 1.0
species: 902589

902589
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: mannosylinositol phosphorylceramide D (C26) [endoplasmic reticulum]

901569
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: L-phenylalanine [mitochondrion]

903464
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: O-acetyl-L-homoserine [cytoplasm]

919076
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TRP2:TRP3 [cytoplasm]

912032
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HIS3 [cytoplasm]

893408
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: 3-oxotetradecanoyl-CoA [peroxisome]

909800
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: CPT1 [endoplasmic reticulum]

914911
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: PLB2 [extracellular]

905552
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: sodium [extracellular]

892773
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-trans,6-trans,10-trans-geranylgeranyl diphosphate [cytoplasm]

939959
type: Reaction
modifier: meta s 2521 b r 0288
reversible: true
reactant: 939983
fast: false
name: cis-prenyltransferase step 08
is: SBO:0000176
notes: GENE_ASSOCIATION:(YBR002C or YMR101C)
product: 939995
reactant: 939971
modifier: meta s 2462 b r 0288
product: 940007

939983
type: SpeciesReference
stoichiometry: 1.0
species: 900597

939995
type: SpeciesReference
stoichiometry: 1.0
species: 897393

939971
type: SpeciesReference
stoichiometry: 1.0
species: 897057

897057
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: decaprenyl diphosphate [lipid particle]

915475
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: RER2 [lipid particle]

940007
type: SpeciesReference
stoichiometry: 1.0
species: 906596

906596
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: undecaprenyl diphosphate [lipid particle]

007208
type: Reaction
reversible: true
fast: false
reactant: 007220
product: 007256
modifier: meta s 2610 b r 1185
notes: GENE_ASSOCIATION:YBR293W
product: 007244
name: L-arganine transport
reactant: 007232
is: SBO:0000185

007220
type: SpeciesReference
stoichiometry: 1.0
species: 899133

007256
type: SpeciesReference
stoichiometry: 1.0
species: 900837

900837
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: L-arginine [vacuole]

007244
type: SpeciesReference
stoichiometry: 1.0
species: 899037

007232
type: SpeciesReference
stoichiometry: 1.0
species: 900801

900801
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-arginine [cytoplasm]

995734
type: Reaction
fast: false
modifier: 995794
modifier: 995806
reactant: 995746
notes: GENE_ASSOCIATION:((YDR178W and YJL045W and YKL141W and YLL041C) or (YDR178W and YKL141W and YKL148C and YLL041C))
reversible: true
is: SBO:0000176
name: succinate dehydrogenase (FADH2, ubiquinone-6)
product: 995782
product: 995770
reactant: 995758

995746
type: SpeciesReference
stoichiometry: 1.0
species: 897993

897993
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: FADH2 [mitochondrion]

995782
type: SpeciesReference
stoichiometry: 1.0
species: 906440

995770
type: SpeciesReference
stoichiometry: 1.0
species: 897969

897969
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: FAD [mitochondrion]

995758
type: SpeciesReference
stoichiometry: 1.0
species: 906452

898245
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: fMet-tRNA(fMet) [mitochondrion]

978808
type: Reaction
product: 978856
notes: GENE_ASSOCIATION:YER005W
reversible: true
product: 978844
product: 978868
modifier: meta s 2640 b r 0790
is: SBO:0000176
reactant: 978820
fast: false
reactant: 978832
name: nucleoside diphosphatase

978856
type: SpeciesReference
stoichiometry: 1.0
species: 904256

978844
type: SpeciesReference
stoichiometry: 1.0
species: 899037

978868
type: SpeciesReference
stoichiometry: 1.0
species: 906548

906548
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: UMP [cytoplasm]

978820
type: SpeciesReference
stoichiometry: 1.0
species: 899145

978832
type: SpeciesReference
stoichiometry: 1.0
species: 906464

906464
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: UDP [cytoplasm]

911468
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GPD1 [cytoplasm]

922966
type: Reaction
reactant: 922978
reactant: 923002
notes: GENE_ASSOCIATION:YKR009C
modifier: 923038
product: 923026
name: 3-hydroxyacyl-CoA dehydrogenase (3-oxohexadecanoyl-CoA)
is: SBO:0000176
product: 923014
reversible: true
fast: false
reactant: 922990

922978
type: SpeciesReference
stoichiometry: 1.0
species: 893372

893372
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: 3-oxopalmitoyl-CoA [peroxisome]

923002
type: SpeciesReference
stoichiometry: 1.0
species: 903176

923026
type: SpeciesReference
stoichiometry: 1.0
species: 903128

923014
type: SpeciesReference
stoichiometry: 1.0
species: 891323

891323
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: (S)-3-hydroxypalmitoyl-CoA [peroxisome]

922990
type: SpeciesReference
stoichiometry: 1.0
species: 899121

949600
type: Reaction
modifier: 949684
fast: false
product: 949672
product: 949648
product: 949660
reactant: 949636
reactant: 949624
is: SBO:0000176
notes: GENE_ASSOCIATION:YER015W
name: fatty-acid--CoA ligase (dodecanoate)
reactant: 949612
reversible: true

949672
type: SpeciesReference
stoichiometry: 1.0
species: 901977

949648
type: SpeciesReference
stoichiometry: 1.0
species: 895173

949660
type: SpeciesReference
stoichiometry: 1.0
species: 897429

949636
type: SpeciesReference
stoichiometry: 1.0
species: 901929

949624
type: SpeciesReference
stoichiometry: 1.0
species: 896373

949612
type: SpeciesReference
stoichiometry: 1.0
species: 895329

977237
type: Reaction
name: NAD synthase (nh3)
fast: false
reactant: 977249
product: 977297
product: 977321
is: SBO:0000176
reactant: 977273
product: 977285
modifier: 977333
reversible: true
product: 977309
notes: GENE_ASSOCIATION:YHR074W
reactant: 977261

977249
type: SpeciesReference
stoichiometry: 1.0
species: 895125

895125
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: ammonium [nucleus]

977297
type: SpeciesReference
stoichiometry: 1.0
species: 897417

897417
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: diphosphate [nucleus]

977321
type: SpeciesReference
stoichiometry: 1.0
species: 903116

903116
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: NAD [nucleus]

977273
type: SpeciesReference
stoichiometry: 1.0
species: 896985

896985
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: deamido-NAD(+) [nucleus]

977285
type: SpeciesReference
stoichiometry: 1.0
species: 895161

895161
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: AMP [nucleus]

915427
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: QNS1 [nucleus]

977309
type: SpeciesReference
stoichiometry: 1.0
species: 899109

977261
type: SpeciesReference
stoichiometry: 1.0
species: 895317

896517
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate [cytoplasm]

914239
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: ODC1 [mitochondrial membrane]

944038
type: Reaction
is: SBO:0000176
modifier: meta s 2624 b r 0342
name: dihydroceramidase
product: 944062
reactant: 944050
fast: false
reversible: true
notes: GENE_ASSOCIATION:YPL087W
product: 944074

917514
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: YDC1 [endoplasmic reticulum]

944062
type: SpeciesReference
stoichiometry: 1.0
species: 902073

902073
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: lignoceric acid [endoplasmic reticulum]

944050
type: SpeciesReference
stoichiometry: 1.0
species: 895761

944074
type: SpeciesReference
stoichiometry: 1.0
species: 904760

904760
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: phytosphingosine [endoplasmic reticulum]

918739
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MET16:TRX1 [cytoplasm]

933348
type: Reaction
fast: false
product: 933384
notes: GENE_ASSOCIATION:YDR354W
reactant: 933360
product: 933396
is: SBO:0000176
modifier: 933408
reactant: 933372
name: anthranilate phosphoribosyltransferase
reversible: true

933384
type: SpeciesReference
stoichiometry: 1.0
species: 897369

933360
type: SpeciesReference
stoichiometry: 1.0
species: 895185

895185
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: anthranilate [cytoplasm]

933396
type: SpeciesReference
stoichiometry: 1.0
species: 902949

902949
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: N-(5-phospho-beta-D-ribosyl)anthranilate [cytoplasm]

933372
type: SpeciesReference
stoichiometry: 1.0
species: 904952

969422
type: Reaction
reversible: true
name: isocitrate dehydrogenase (NADP+), peroxisomal
notes: GENE_ASSOCIATION:YNL009W
fast: false
modifier: meta s 2222 b r 0661
product: 969470
reactant: 969434
reactant: 969446
product: 969458
is: SBO:0000176
product: 969482

912595
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: IDP3 [peroxisome]

969470
type: SpeciesReference
stoichiometry: 1.0
species: 895533

895533
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: carbon dioxide [peroxisome]

969434
type: SpeciesReference
stoichiometry: 1.0
species: 900573

900573
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: isocitrate(3-) [peroxisome]

969446
type: SpeciesReference
stoichiometry: 1.0
species: 903224

903224
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: NADP(+) [peroxisome]

969458
type: SpeciesReference
stoichiometry: 1.0
species: 892725

892725
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: 2-oxoglutarate [peroxisome]

969482
type: SpeciesReference
stoichiometry: 1.0
species: 903272

903272
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: NADPH [peroxisome]

927083
type: Reaction
product: 927155
notes: GENE_ASSOCIATION:YAL054C
modifier: 927167
name: acetyl-CoA synthetase
product: 927131
reactant: 927107
fast: false
reactant: 927119
reversible: true
reactant: 927095
is: SBO:0000176
product: 927143

927155
type: SpeciesReference
stoichiometry: 1.0
species: 897405

908024
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ACS1 [mitochondrion]

927131
type: SpeciesReference
stoichiometry: 1.0
species: 894609

927107
type: SpeciesReference
stoichiometry: 1.0
species: 895305

927119
type: SpeciesReference
stoichiometry: 1.0
species: 896349

927095
type: SpeciesReference
stoichiometry: 1.0
species: 894524

894524
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: acetate [mitochondrion]

927143
type: SpeciesReference
stoichiometry: 1.0
species: 895149

986823
type: Reaction
notes: GENE_ASSOCIATION:YAR015W
product: 986883
product: 986895
fast: false
name: phosphoribosyl amino imidazolesuccinocarbozamide synthetase
is: SBO:0000176
reversible: true
reactant: 986859
reactant: 986835
product: 986871
modifier: 986919
reactant: 986847
product: 986907

986883
type: SpeciesReference
stoichiometry: 1.0
species: 894813

986895
type: SpeciesReference
stoichiometry: 1.0
species: 899037

986859
type: SpeciesReference
stoichiometry: 1.0
species: 904736

904736
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: phosphoribosyl-carboxy-aminoimidazole [cytoplasm]

986835
type: SpeciesReference
stoichiometry: 1.0
species: 895269

986871
type: SpeciesReference
stoichiometry: 1.0
species: 893828

893828
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole [cytoplasm]

908084
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADE1 [cytoplasm]

986847
type: SpeciesReference
stoichiometry: 1.0
species: 900897

986907
type: SpeciesReference
stoichiometry: 1.0
species: 904256

930526
type: Reaction
notes: GENE_ASSOCIATION:(YDR368W or YHR104W)
product: 930586
modifier: meta s 2644 b r 0164
name: alcohol dehydrogenase (glycerol, NADP)
reactant: 930550
is: SBO:0000176
product: 930574
fast: false
reactant: 930538
reactant: 930562
modifier: meta s 2143 b r 0164
reversible: true

930586
type: SpeciesReference
stoichiometry: 1.0
species: 903188

917754
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: YPR1 [cytoplasm]

930550
type: SpeciesReference
stoichiometry: 1.0
species: 899037

930574
type: SpeciesReference
stoichiometry: 1.0
species: 898737

898737
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: glycerol [cytoplasm]

930538
type: SpeciesReference
stoichiometry: 1.0
species: 896733

896733
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: D-glyceraldehyde [cytoplasm]

930562
type: SpeciesReference
stoichiometry: 1.0
species: 903236

911648
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GRE3 [cytoplasm]

969338
type: Reaction
reversible: true
product: 969398
product: 969410
product: 969386
notes: GENE_ASSOCIATION:YDL066W
name: isocitrate dehydrogenase (NADP+)
fast: false
reactant: 969350
product: 969374
modifier: meta s 2220 b r 0660
reactant: 969362
is: SBO:0000176

969398
type: SpeciesReference
stoichiometry: 1.0
species: 899097

969410
type: SpeciesReference
stoichiometry: 1.0
species: 903260

903260
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: NADPH [mitochondrion]

969386
type: SpeciesReference
stoichiometry: 1.0
species: 895521

969350
type: SpeciesReference
stoichiometry: 1.0
species: 900561

969374
type: SpeciesReference
stoichiometry: 1.0
species: 892701

912571
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: IDP1 [mitochondrion]

969362
type: SpeciesReference
stoichiometry: 1.0
species: 903212

903212
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: NADP(+) [mitochondrion]

012644
type: Reaction
modifier: meta s 2501 b r 1265
reversible: true
reactant: 012656
name: succinate-fumarate transport
notes: GENE_ASSOCIATION:YJR095W
product: 012692
reactant: 012668
is: SBO:0000185
product: 012680
fast: false

915974
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: SFC1 [mitochondrial membrane]

012656
type: SpeciesReference
stoichiometry: 1.0
species: 898389

012692
type: SpeciesReference
stoichiometry: 1.0
species: 905768

012668
type: SpeciesReference
stoichiometry: 1.0
species: 905756

012680
type: SpeciesReference
stoichiometry: 1.0
species: 898377

898053
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: fatty acid [endoplasmic reticulum]

900081
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: inositol-P-ceramide A (C26) [Golgi]

933504
type: Reaction
product: 933540
notes: GENE_ASSOCIATION:YDR305C
reactant: 933516
name: Ap4A hydrolase
fast: false
reversible: true
modifier: 933564
reactant: 933528
product: 933552
is: SBO:0000176

933540
type: SpeciesReference
stoichiometry: 2.0
species: 894813

933516
type: SpeciesReference
stoichiometry: 1.0
species: 899145

912140
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HNT2 [cytoplasm]

933528
type: SpeciesReference
stoichiometry: 1.0
species: 903920

903920
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: P(1),P(4)-bis(5'-adenosyl) tetraphosphate [cytoplasm]

933552
type: SpeciesReference
stoichiometry: 2.0
species: 899037

900465
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: isoamylol [mitochondrion]

975833
type: Reaction
notes: GENE_ASSOCIATION:((YBR036C and YPL057C) or (YBR036C and YBR161W))
product: 975869
reactant: 975857
fast: false
name: MIPC synthase
is: SBO:0000176
modifier: meta s 2673 b r 0749
modifier: meta s 2672 b r 0749
reactant: 975845
reversible: true
product: 975881

975869
type: SpeciesReference
stoichiometry: 1.0
species: 898449

898449
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: GDP [Golgi]

975857
type: SpeciesReference
stoichiometry: 1.0
species: 900189

900189
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: inositol-P-ceramide B' (C24) [Golgi]

918102
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: CSG2:SUR1 [Golgi]

918090
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: CSG2:CSH1 [Golgi]

975845
type: SpeciesReference
stoichiometry: 1.0
species: 898497

898497
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: GDP-alpha-D-mannose [Golgi]

975881
type: SpeciesReference
stoichiometry: 1.0
species: 902421

902421
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: mannosylinositol phosphorylceramide B' (C24) [Golgi]

892664
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-oxobutanoate [cytoplasm]

913963
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: MUP1 [cell envelope]

950440
type: Reaction
modifier: 950536
reactant: 950464
modifier: 950548
reversible: true
is: SBO:0000176
notes: GENE_ASSOCIATION:(YIL009W or YMR246W or YOR317W)
reactant: 950476
product: 950512
product: 950500
fast: false
name: fatty-acid--CoA ligase (octadecenoate)
modifier: 950524
product: 950488
reactant: 950452

950464
type: SpeciesReference
stoichiometry: 1.0
species: 896313

950476
type: SpeciesReference
stoichiometry: 1.0
species: 903704

903704
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: oleate [cytoplasm]

950512
type: SpeciesReference
stoichiometry: 1.0
species: 903716

903716
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: oleoyl-CoA [cytoplasm]

950500
type: SpeciesReference
stoichiometry: 1.0
species: 897369

950488
type: SpeciesReference
stoichiometry: 1.0
species: 895137

950452
type: SpeciesReference
stoichiometry: 1.0
species: 895269

911120
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GAD1 [cytoplasm]

893804
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 4beta-methylzymosterol-4alpha-carboxylic acid [cytoplasm]

907736
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: palmitoylated YAL014C [cytoplasm]

992571
type: Reaction
modifier: 992714
modifier: 992727
modifier: 992701
modifier: 992662
product: 992610
reactant: 992597
modifier: 992675
reversible: true
reactant: 992584
name: ribonucleotide reductase
is: SBO:0000176
fast: false
product: 992636
modifier: 992688
product: 992623
modifier: 992649
notes: GENE_ASSOCIATION:(YER070W or YJL026W or YIL066C or YGR180C or (YER070W and YJL026W) or (YER070W and YGR180C) or (YER070W and YJL026W) or (YGR180C and YIL066C))
modifier: 992740

918956
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: RNR1:RNR4 [nucleus]

918980
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: RNR2:RNR3 [nucleus]

918932
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: RNR1:RNR2 [nucleus]

915649
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: RNR2 [nucleus]

992610
type: SpeciesReference
stoichiometry: 1.0
species: 897141

897141
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: dGDP [nucleus]

992597
type: SpeciesReference
stoichiometry: 1.0
species: 907388

907388
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: TRX1 [nucleus]

915675
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: RNR3 [nucleus]

992584
type: SpeciesReference
stoichiometry: 1.0
species: 898473

898473
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: GDP [nucleus]

992636
type: SpeciesReference
stoichiometry: 1.0
species: 907436

907436
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: YLR043C disulphide [nucleus]

992623
type: SpeciesReference
stoichiometry: 1.0
species: 899205

899205
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: H2O [nucleus]

915623
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: RNR1 [nucleus]

919004
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: RNR3:RNR4 [nucleus]

915223
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: protein with N-terminal(Met-Phe) [cytoplasm]

893996
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5-amino-6-(5-phosphoribitylamino)uracil [cytoplasm]

895377
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: beta-D-mannosyldiacetylchitobiosyldiphosphodolichol [cytoplasm]

959607
type: Reaction
product: 959715
product: 959667
reactant: 959643
product: 959679
product: 959691
fast: false
reversible: true
product: 959703
notes: GENE_ASSOCIATION:YMR217W
reactant: 959655
is: SBO:0000176
reactant: 959631
reactant: 959619
modifier: 959727
name: GMP synthase

959715
type: SpeciesReference
stoichiometry: 1.0
species: 901101

959667
type: SpeciesReference
stoichiometry: 1.0
species: 895137

959643
type: SpeciesReference
stoichiometry: 1.0
species: 901185

959679
type: SpeciesReference
stoichiometry: 1.0
species: 897369

959691
type: SpeciesReference
stoichiometry: 1.0
species: 898905

959703
type: SpeciesReference
stoichiometry: 2.0
species: 899037

959655
type: SpeciesReference
stoichiometry: 1.0
species: 906776

906776
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: xanthosine-5-phosphate [cytoplasm]

959631
type: SpeciesReference
stoichiometry: 1.0
species: 899145

959619
type: SpeciesReference
stoichiometry: 1.0
species: 895269

911756
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GUA1 [cytoplasm]

893109
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3-hydroxy-L-kynurenine [cytoplasm]

906644
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: urea [extracellular]

909824
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: CRD1 [mitochondrion]

980896
type: Reaction
reversible: true
is: SBO:0000176
notes: GENE_ASSOCIATION:YMR062C
modifier: 980956
product: 980944
product: 980932
reactant: 980920
fast: false
name: ornithine transacetylase
reactant: 980908

980944
type: SpeciesReference
stoichiometry: 1.0
species: 903776

903776
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ornithine [mitochondrion]

980932
type: SpeciesReference
stoichiometry: 1.0
species: 903009

903009
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: N-acetyl-L-glutamate(2-) [mitochondrion]

980920
type: SpeciesReference
stoichiometry: 1.0
species: 902889

902889
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: N(2)-acetyl-L-ornithine [mitochondrion]

980908
type: SpeciesReference
stoichiometry: 1.0
species: 901125

925895
type: Reaction
product: 925931
notes: GENE_ASSOCIATION:(YCL009C and YMR108W)
product: 925943
modifier: meta s 2716 b r 0097
reversible: true
reactant: 925919
is: SBO:0000176
fast: false
reactant: 925907
name: acetolactate synthase

925931
type: SpeciesReference
stoichiometry: 1.0
species: 892338

892338
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 2-acetyllactic acid [mitochondrion]

925943
type: SpeciesReference
stoichiometry: 1.0
species: 895521

925919
type: SpeciesReference
stoichiometry: 2.0
species: 905132

925907
type: SpeciesReference
stoichiometry: 1.0
species: 899097

940619
type: Reaction
notes: GENE_ASSOCIATION:YMR101C
reactant: 940643
reversible: true
fast: false
is: SBO:0000176
name: cis-prenyltransferase step 19
modifier: meta s 2521 b r 0299
reactant: 940631
product: 940667
product: 940655

940643
type: SpeciesReference
stoichiometry: 1.0
species: 900597

940631
type: SpeciesReference
stoichiometry: 1.0
species: 899265

899265
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: henicosaprenyl diphosphate [lipid particle]

940667
type: SpeciesReference
stoichiometry: 1.0
species: 897453

897453
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: docosaprenyl diphosphate [lipid particle]

940655
type: SpeciesReference
stoichiometry: 1.0
species: 897393

903056
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: N-formyl-L-tyrosine [cytoplasm]

911840
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: GUT2 [mitochondrion]

914659
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: PGS1 [mitochondrion]

meta r 0926
type: Reaction
is described by: http://identifiers.org/pubmed/15689497
product: 988035
fast: false
notes: GENE_ASSOCIATION:
name: PI4,5P2:YIL105C binding to TORC2 at plasma membrane
is: SBO:0000176
reversible: true
reactant: 988011
reactant: 988023
is described by: S000004230

988035
type: SpeciesReference
stoichiometry: 1.0
species: 907460

907460
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: 1D-myo-inositol 4,5-bisphosphate:AVO1:AVO2:BIT61:LST8:SLM1:TOR2:TSC11 [cell envelope]

988011
type: SpeciesReference
stoichiometry: 1.0
species: 907484

907484
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 1D-myo-inositol 4,5-bisphosphate:SLM1 [cytoplasm]

988023
type: SpeciesReference
stoichiometry: 1.0
species: 917910

917910
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: AVO1:AVO2:BIT61:LST8:TOR2:TSC11 [cell envelope]

979504
type: Reaction
reactant: 979528
fast: false
reversible: true
name: nucleoside diphosphate kinase
product: 979540
is: SBO:0000176
notes: GENE_ASSOCIATION:YKL067W
product: 979552
modifier: 979564
reactant: 979516

979528
type: SpeciesReference
stoichiometry: 1.0
species: 897525

979540
type: SpeciesReference
stoichiometry: 1.0
species: 894813

979552
type: SpeciesReference
stoichiometry: 1.0
species: 897561

979516
type: SpeciesReference
stoichiometry: 1.0
species: 895269

969122
type: Reaction
name: isobutyl acetate-hydrolyzing esterase
product: 969170
product: 969182
is: SBO:0000176
reactant: 969134
modifier: meta s 2216 b r 0657
reversible: true
notes: GENE_ASSOCIATION:YOR126C
product: 969158
fast: false
reactant: 969146

969170
type: SpeciesReference
stoichiometry: 1.0
species: 899037

969182
type: SpeciesReference
stoichiometry: 1.0
species: 900477

900477
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: isobutanol [cytoplasm]

969134
type: SpeciesReference
stoichiometry: 1.0
species: 899145

912523
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: IAH1 [cytoplasm]

969158
type: SpeciesReference
stoichiometry: 1.0
species: 894488

969146
type: SpeciesReference
stoichiometry: 1.0
species: 900501

900501
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: isobutyl acetate [cytoplasm]

905636
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: sphinganine [endoplasmic reticulum]

900357
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: inositol-P-ceramide D (C26) [endoplasmic reticulum]

996346
type: Reaction
name: taurcholate via ABC system
is: SBO:0000176
product: 996418
fast: false
notes: GENE_ASSOCIATION:YLL048C
reactant: 996370
product: 996430
reversible: true
modifier: meta s 2622 b r 1028
product: 996394
reactant: 996382
product: 996406
reactant: 996358

996418
type: SpeciesReference
stoichiometry: 1.0
species: 904328

904328
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: phosphate [vacuole]

996370
type: SpeciesReference
stoichiometry: 1.0
species: 899229

899229
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: H2O [vacuole]

996430
type: SpeciesReference
stoichiometry: 1.0
species: 905900

905900
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: taurocholic acid [vacuole]

996394
type: SpeciesReference
stoichiometry: 1.0
species: 894885

996382
type: SpeciesReference
stoichiometry: 1.0
species: 905888

905888
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: taurocholic acid [cytoplasm]

996406
type: SpeciesReference
stoichiometry: 1.0
species: 899133

996358
type: SpeciesReference
stoichiometry: 1.0
species: 895341

974861
type: Reaction
reversible: true
fast: false
reactant: 974885
reactant: 974873
product: 974897
product: 974921
name: mevalonate kinase (ctp)
notes: GENE_ASSOCIATION:YMR208W
modifier: 974933
product: 974909
is: SBO:0000176

974885
type: SpeciesReference
stoichiometry: 1.0
species: 896397

974873
type: SpeciesReference
stoichiometry: 1.0
species: 891118

974897
type: SpeciesReference
stoichiometry: 1.0
species: 891009

891009
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (R)-5-phosphomevalonic acid [cytoplasm]

974921
type: SpeciesReference
stoichiometry: 1.0
species: 899037

910436
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ERG12 [cytoplasm]

974909
type: SpeciesReference
stoichiometry: 1.0
species: 895593

895593
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CDP [cytoplasm]

998518
type: Reaction
product: 998577
reactant: 998553
reactant: 998529
product: 998589
modifier: meta s 2333 b r 1058
is: SBO:0000176
reversible: true
fast: false
name: tryptophanyl-tRNA synthetase
reactant: 998541
notes: GENE_ASSOCIATION:YDR268W
product: 998565

998577
type: SpeciesReference
stoichiometry: 1.0
species: 897405

998553
type: SpeciesReference
stoichiometry: 1.0
species: 907304

998529
type: SpeciesReference
stoichiometry: 1.0
species: 895305

998589
type: SpeciesReference
stoichiometry: 1.0
species: 906368

906368
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: Trp-tRNA(Trp) [mitochondrion]

913927
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: MSW1 [mitochondrion]

998541
type: SpeciesReference
stoichiometry: 1.0
species: 901749

901749
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: L-tryptophan [mitochondrion]

998565
type: SpeciesReference
stoichiometry: 1.0
species: 895149

953404
type: Reaction
reactant: 953428
reversible: true
product: 953512
reactant: 953440
product: 953488
name: fatty-acyl-CoA synthase (n-C18:0CoA)
product: 953500
product: 953476
notes: GENE_ASSOCIATION:(YGR037C and YKL182W and YNR016C and YPL231W)
reactant: 953416
is: SBO:0000176
fast: false
reactant: 953452
modifier: 953524
product: 953464

953428
type: SpeciesReference
stoichiometry: 1.0
species: 902157

953512
type: SpeciesReference
stoichiometry: 1.0
species: 905732

953440
type: SpeciesReference
stoichiometry: 2.0
species: 903236

953488
type: SpeciesReference
stoichiometry: 1.0
species: 899145

953500
type: SpeciesReference
stoichiometry: 2.0
species: 903188

953476
type: SpeciesReference
stoichiometry: 1.0
species: 896313

953416
type: SpeciesReference
stoichiometry: 3.0
species: 899037

953452
type: SpeciesReference
stoichiometry: 1.0
species: 904040

904040
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: palmitoyl-CoA [cytoplasm]

953464
type: SpeciesReference
stoichiometry: 1.0
species: 895485

916585
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: TGL5 [lipid particle]

923050
type: Reaction
reversible: true
product: 923098
product: 923110
modifier: 923122
reactant: 923086
is: SBO:0000176
reactant: 923074
reactant: 923062
notes: GENE_ASSOCIATION:YKR009C
name: 3-hydroxyacyl-CoA dehydrogenase (3-oxooctadecanoyl-CoA)
fast: false

923098
type: SpeciesReference
stoichiometry: 1.0
species: 893180

893180
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: 3-hydroxyoctadecanoyl-CoA [peroxisome]

923110
type: SpeciesReference
stoichiometry: 1.0
species: 903128

923086
type: SpeciesReference
stoichiometry: 1.0
species: 903176

923074
type: SpeciesReference
stoichiometry: 1.0
species: 899121

923062
type: SpeciesReference
stoichiometry: 1.0
species: 893348

893348
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: 3-oxooctadecanoyl-CoA [peroxisome]

993230
type: Reaction
modifier: meta s 2481 b r 0984
product: 993256
reactant: 993243
notes: GENE_ASSOCIATION:YJL121C
is: SBO:0000176
fast: false
reversible: true
name: ribulose 5-phosphate 3-epimerase

915714
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: RPE1 [cytoplasm]

993256
type: SpeciesReference
stoichiometry: 1.0
species: 896841

993243
type: SpeciesReference
stoichiometry: 1.0
species: 896805

896805
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: D-ribulose 5-phosphate [cytoplasm]

917165
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: URA3 [cytoplasm]

951376
type: Reaction
reactant: 951400
product: 951424
name: fatty-acyl-ACP hydrolase
product: 951436
fast: false
product: 951412
notes: GENE_ASSOCIATION:(YKL182W and YPL231W)
is: SBO:0000176
reactant: 951388
reversible: true
modifier: 951448

951400
type: SpeciesReference
stoichiometry: 1.0
species: 899145

951424
type: SpeciesReference
stoichiometry: 1.0
species: 902793

951436
type: SpeciesReference
stoichiometry: 1.0
species: 908060

951412
type: SpeciesReference
stoichiometry: 1.0
species: 899037

951388
type: SpeciesReference
stoichiometry: 1.0
species: 891480

003437
type: Reaction
product: 003497
name: CTP/CMP antiport
product: 003485
reversible: true
reactant: 003461
fast: false
modifier: meta s 2470 b r 1131
reactant: 003449
reactant: 003473
product: 003509
is: SBO:0000185
notes: GENE_ASSOCIATION:YBR192W

003497
type: SpeciesReference
stoichiometry: 1.0
species: 896421

003485
type: SpeciesReference
stoichiometry: 1.0
species: 896277

003461
type: SpeciesReference
stoichiometry: 1.0
species: 896397

003449
type: SpeciesReference
stoichiometry: 1.0
species: 896301

003473
type: SpeciesReference
stoichiometry: 2.0
species: 899037

003509
type: SpeciesReference
stoichiometry: 2.0
species: 899097

912403
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HXT17 [cell envelope]

907472
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: 1D-myo-inositol 4,5-bisphosphate:AVO1:AVO2:BIT61:LST8:SLM2:TOR2:TSC11 [cell envelope]

959523
type: Reaction
product: 959583
reactant: 959535
reversible: true
fast: false
product: 959559
product: 959571
modifier: 959595
reactant: 959547
notes: GENE_ASSOCIATION:YLR195C
name: glycylpeptide N-tetradecanoyltransferase
is: SBO:0000176

959583
type: SpeciesReference
stoichiometry: 1.0
species: 903068

903068
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: N-tetradecanoylglycylpeptide [cytoplasm]

959535
type: SpeciesReference
stoichiometry: 1.0
species: 898869

898869
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: glycylpeptide [cytoplasm]

959559
type: SpeciesReference
stoichiometry: 1.0
species: 896313

959571
type: SpeciesReference
stoichiometry: 1.0
species: 899037

914107
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: NMT1 [cytoplasm]

959547
type: SpeciesReference
stoichiometry: 1.0
species: 902841

969050
type: Reaction
reversible: true
fast: false
reactant: 969074
product: 969086
notes: GENE_ASSOCIATION:YOR126C
product: 969098
name: isoamyl acetate-hydrolyzing esterase
modifier: meta s 2216 b r 0656
product: 969110
reactant: 969062
is: SBO:0000176

969074
type: SpeciesReference
stoichiometry: 1.0
species: 900429

969086
type: SpeciesReference
stoichiometry: 1.0
species: 894488

969098
type: SpeciesReference
stoichiometry: 1.0
species: 899037

969110
type: SpeciesReference
stoichiometry: 1.0
species: 900453

900453
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: isoamylol [cytoplasm]

969062
type: SpeciesReference
stoichiometry: 1.0
species: 899145

911924
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HEM2 [cytoplasm]

892059
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 1-pyrroline-5-carboxylate [cytoplasm]

902445
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: mannosylinositol phosphorylceramide B' (C26) [endoplasmic reticulum]

892749
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 2-phenylethanol [mitochondrion]

905144
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: quinolinate(2-) [cytoplasm]

985947
type: Reaction
is: SBO:0000176
product: 986007
notes: GENE_ASSOCIATION:(YMR006C or YOL011W)
modifier: meta s 2415 b r 0895
product: 985995
reversible: true
reactant: 985971
name: phospholipase B
modifier: meta s 2417 b r 0895
fast: false
reactant: 985983
reactant: 985959

986007
type: SpeciesReference
stoichiometry: 1.0
species: 899169

985995
type: SpeciesReference
stoichiometry: 1.0
species: 891649

891649
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: 1-acylglycerophosphocholine [extracellular]

985971
type: SpeciesReference
stoichiometry: 1.0
species: 899061

914935
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: PLB3 [extracellular]

985983
type: SpeciesReference
stoichiometry: 1.0
species: 905528

905528
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: sn-glycero-3-phosphocholine [extracellular]

985959
type: SpeciesReference
stoichiometry: 1.0
species: 898065

898065
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: fatty acid [extracellular]

898305
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: FMNH2 [mitochondrion]

957255
type: Reaction
reactant: 957279
notes: GENE_ASSOCIATION:YPL059W
modifier: meta s 2148 b r 0484
product: 957291
product: 957303
reactant: 957267
reversible: true
name: glutathione peroxidase, mitochondria
is: SBO:0000176
fast: false

957279
type: SpeciesReference
stoichiometry: 1.0
species: 899469

899469
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: hydrogen peroxide [mitochondrion]

911708
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: GRX5 [mitochondrion]

957291
type: SpeciesReference
stoichiometry: 1.0
species: 898629

898629
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: glutathione disulfide [mitochondrion]

957303
type: SpeciesReference
stoichiometry: 2.0
species: 899193

957267
type: SpeciesReference
stoichiometry: 2.0
species: 898593

898593
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: glutathione [mitochondrion]

ORG:
  orgname: University of California, San Diego
n:
  given: Markus
  family: Herrgard

904784
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: pimeloyl-CoA [cytoplasm]

909560
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CDC60 [cytoplasm]

004685
type: Reaction
name: episterol transport
modifier: meta s 1928 b r 1146
reactant: 004697
modifier: meta s 2379 b r 1146
fast: false
product: 004709
reversible: true
is: SBO:0000185
notes: GENE_ASSOCIATION:(YIL013C or YOR011W)

004697
type: SpeciesReference
stoichiometry: 1.0
species: 897657

897657
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: episterol [extracellular]

914479
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: PDR11 [cell envelope]

004709
type: SpeciesReference
stoichiometry: 1.0
species: 897633

897633
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: episterol [cytoplasm]

897945
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: ethyl acetate [extracellular]

963146
type: Reaction
product: 963206
modifier: 963218
modifier: 963242
name: hydroxymethylpyrimidine kinase (ATP)
notes: GENE_ASSOCIATION:(YOL055C or YPL258C or YPR121W)
reversible: true
reactant: 963158
reactant: 963170
product: 963182
fast: false
product: 963194
modifier: 963230
is: SBO:0000176

963206
type: SpeciesReference
stoichiometry: 1.0
species: 899037

916598
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: THI20 [cytoplasm]

916624
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: THI22 [cytoplasm]

963158
type: SpeciesReference
stoichiometry: 1.0
species: 893540

893540
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 4-amino-5-hydroxymethyl-2-methylpyrimidine [cytoplasm]

963170
type: SpeciesReference
stoichiometry: 1.0
species: 895269

963182
type: SpeciesReference
stoichiometry: 1.0
species: 893516

893516
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 4-amino-2-methyl-5-phosphomethylpyrimidine [cytoplasm]

963194
type: SpeciesReference
stoichiometry: 1.0
species: 894813

916611
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: THI21 [cytoplasm]

933900
type: Reaction
fast: false
reversible: true
reactant: 933936
modifier: 933984
reactant: 933924
is: SBO:0000176
product: 933972
notes: GENE_ASSOCIATION:YDR341C
product: 933948
reactant: 933912
name: arginyl-tRNA synthetase
product: 933960

933936
type: SpeciesReference
stoichiometry: 1.0
species: 906968

906968
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: tRNA(Arg), cytoplasmic [cytoplasm]

917526
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: YDR341C [cytoplasm]

933924
type: SpeciesReference
stoichiometry: 1.0
species: 900801

933972
type: SpeciesReference
stoichiometry: 1.0
species: 897369

933948
type: SpeciesReference
stoichiometry: 1.0
species: 895137

933912
type: SpeciesReference
stoichiometry: 1.0
species: 895269

933960
type: SpeciesReference
stoichiometry: 1.0
species: 895197

895197
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: Arg-tRNA(Arg) [cytoplasm]

916481
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TDH1 [cytoplasm]

926567
type: Reaction
reversible: true
notes: GENE_ASSOCIATION:YIL160C
modifier: 926627
fast: false
name: acetyl-CoA C-acyltransferase (decanoyl-CoA)
product: 926615
reactant: 926591
reactant: 926579
is: SBO:0000176
product: 926603

915055
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: POT1 [peroxisome]

926615
type: SpeciesReference
stoichiometry: 1.0
species: 897045

897045
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: decanoyl-CoA [peroxisome]

926591
type: SpeciesReference
stoichiometry: 1.0
species: 896373

926579
type: SpeciesReference
stoichiometry: 1.0
species: 893324

893324
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: 3-oxolauroyl-CoA [peroxisome]

926603
type: SpeciesReference
stoichiometry: 1.0
species: 894633

909752
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: COQ1 [mitochondrion]

932004
type: Reaction
product: 932052
name: aldehyde dehydrogenase (isobutyl alcohol, NAD)
is: SBO:0000176
product: 932064
reactant: 932016
reactant: 932040
reactant: 932028
notes: GENE_ASSOCIATION:YMR083W
reversible: true
modifier: meta s 1859 b r 0183
fast: false

932052
type: SpeciesReference
stoichiometry: 1.0
species: 900489

900489
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: isobutanol [mitochondrion]

932064
type: SpeciesReference
stoichiometry: 1.0
species: 903104

932016
type: SpeciesReference
stoichiometry: 1.0
species: 899097

932040
type: SpeciesReference
stoichiometry: 1.0
species: 903164

932028
type: SpeciesReference
stoichiometry: 1.0
species: 900537

900537
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: isobutyraldehyde [mitochondrion]

908240
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ADH3 [mitochondrion]

913171
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: LEM3 [cell envelope]

956859
type: Reaction
notes: GENE_ASSOCIATION:YOL033W
product: 956907
reactant: 956883
is: SBO:0000176
reactant: 956895
fast: false
product: 956919
reactant: 956871
product: 956931
reversible: true
name: glutamyl-tRNA synthetase
modifier: meta s 2325 b r 0480

956907
type: SpeciesReference
stoichiometry: 1.0
species: 895149

956883
type: SpeciesReference
stoichiometry: 1.0
species: 901125

956895
type: SpeciesReference
stoichiometry: 1.0
species: 907076

907076
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: tRNA(Glu), mitchondrial [mitochondrion]

956919
type: SpeciesReference
stoichiometry: 1.0
species: 897405

956871
type: SpeciesReference
stoichiometry: 1.0
species: 895305

956931
type: SpeciesReference
stoichiometry: 1.0
species: 898557

898557
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: Glu-tRNA(Glu) [mitochondrion]

913831
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: MSE1 [mitochondrion]

929303
type: Reaction
fast: false
notes: GENE_ASSOCIATION:YNR058W
name: adenosylmethionine-8-amino-7-oxononanoate transaminase
product: 929339
reactant: 929315
modifier: 929363
is: SBO:0000176
reactant: 929327
product: 929351
reversible: true

929339
type: SpeciesReference
stoichiometry: 1.0
species: 894320

929315
type: SpeciesReference
stoichiometry: 1.0
species: 894428

909212
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: BIO3 [cytoplasm]

929327
type: SpeciesReference
stoichiometry: 1.0
species: 905300

905300
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: S-adenosyl-L-methionine [cytoplasm]

929351
type: SpeciesReference
stoichiometry: 1.0
species: 905252

913555
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MET1 [cytoplasm]

906668
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ureidoglycolic acid [cytoplasm]

898689
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: glycan G10599 [endoplasmic reticulum]

904196
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: phenethyl acetate [cytoplasm]

900393
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: iron(2+) [cytoplasm]

911396
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GLT1 [cytoplasm]

915499
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: RIB1 [cytoplasm]

010796
type: Reaction
reversible: true
reactant: 010820
name: NAD transport
is: SBO:0000185
fast: false
notes: GENE_ASSOCIATION:YIL006W
product: 010844
modifier: meta s 2635 b r 1234
reactant: 010808
product: 010832

010820
type: SpeciesReference
stoichiometry: 1.0
species: 903080

010844
type: SpeciesReference
stoichiometry: 1.0
species: 903104

917646
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: YIA6 [mitochondrial membrane]

010808
type: SpeciesReference
stoichiometry: 1.0
species: 896961

896961
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: deamido-NAD(+) [cytoplasm]

010832
type: SpeciesReference
stoichiometry: 1.0
species: 896973

896973
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: deamido-NAD(+) [mitochondrion]

970736
type: Reaction
product: 970801
fast: false
product: 970814
reactant: 970749
modifier: meta s 2724 b r 0678
reactant: 970775
is: SBO:0000176
product: 970840
reactant: 970788
reactant: 970762
notes: GENE_ASSOCIATION:(YBR115C and YGL154C)
product: 970827
reversible: true
name: L-aminoadipate-semialdehyde dehydrogenase (NADPH)

970801
type: SpeciesReference
stoichiometry: 1.0
species: 895137

970814
type: SpeciesReference
stoichiometry: 1.0
species: 897369

970749
type: SpeciesReference
stoichiometry: 1.0
species: 895269

918715
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: LYS2:LYS5 [cytoplasm]

970775
type: SpeciesReference
stoichiometry: 1.0
species: 900681

900681
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-2-aminoadipate(2-) [cytoplasm]

970840
type: SpeciesReference
stoichiometry: 1.0
species: 903188

970788
type: SpeciesReference
stoichiometry: 1.0
species: 903236

970762
type: SpeciesReference
stoichiometry: 1.0
species: 899037

970827
type: SpeciesReference
stoichiometry: 1.0
species: 900753

900753
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-allysine [cytoplasm]

936611
type: Reaction
reactant: 936659
modifier: 936707
reversible: true
name: C-4 sterol methyl oxidase (4,4-dimethylzymosterol)
product: 936671
fast: false
reactant: 936623
reactant: 936647
is: SBO:0000176
notes: GENE_ASSOCIATION:YGR060W
reactant: 936635
product: 936695
product: 936683

936659
type: SpeciesReference
stoichiometry: 3.0
species: 903848

910508
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ERG25 [cytoplasm]

936671
type: SpeciesReference
stoichiometry: 1.0
species: 893804

936623
type: SpeciesReference
stoichiometry: 1.0
species: 892108

892108
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 14-demethyllanosterol [cytoplasm]

936647
type: SpeciesReference
stoichiometry: 3.0
species: 903236

936635
type: SpeciesReference
stoichiometry: 3.0
species: 899037

936695
type: SpeciesReference
stoichiometry: 3.0
species: 903188

936683
type: SpeciesReference
stoichiometry: 4.0
species: 899145

966770
type: Reaction
reactant: 966782
name: IPS phospholipase C
product: 966818
product: 966806
modifier: meta s 2246 b r 0618
fast: false
reversible: true
reactant: 966794
is: SBO:0000176
notes: GENE_ASSOCIATION:YER019W

966782
type: SpeciesReference
stoichiometry: 1.0
species: 899193

966818
type: SpeciesReference
stoichiometry: 1.0
species: 895857

966806
type: SpeciesReference
stoichiometry: 1.0
species: 892180

966794
type: SpeciesReference
stoichiometry: 1.0
species: 900201

900201
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: inositol-P-ceramide B' (C24) [mitochondrion]

932844
type: Reaction
notes: GENE_ASSOCIATION:(YBR126C and YDR074W and (YML100W or YMR261C))
reactant: 932868
reactant: 932856
modifier: meta s 2753 b r 0195
modifier: meta s 2752 b r 0195
product: 932892
is: SBO:0000176
reversible: true
product: 932880
product: 932904
fast: false
name: alpha,alpha-trehalose-phosphate synthase (UDP-forming)

932868
type: SpeciesReference
stoichiometry: 1.0
species: 906524

906524
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: UDP-D-glucose [cytoplasm]

932856
type: SpeciesReference
stoichiometry: 1.0
species: 896721

919064
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TPS1:TPS2:TSL1 [cytoplasm]

919052
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TPS1:TPS2:TPS3 [cytoplasm]

932892
type: SpeciesReference
stoichiometry: 1.0
species: 899037

932880
type: SpeciesReference
stoichiometry: 1.0
species: 894981

894981
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: alpha,alpha-trehalose 6-phosphate [cytoplasm]

932904
type: SpeciesReference
stoichiometry: 1.0
species: 906464

915559
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: RIB7 [cytoplasm]

910100
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: DIC1 [mitochondrial membrane]

905036
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: pyridoxal 5'-phosphate [cytoplasm]

893013
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3-hexaprenyl-4,5-dihydroxybenzoic acid [cytoplasm]

990351
type: Reaction
name: pyruvate carboxylase
modifier: 990447
product: 990435
reactant: 990363
fast: false
reactant: 990375
is: SBO:0000176
notes: GENE_ASSOCIATION:(YBR218C or YGL062W)
reactant: 990387
reversible: true
product: 990423
modifier: 990459
product: 990411
product: 990399

915379
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PYC1 [cytoplasm]

990435
type: SpeciesReference
stoichiometry: 1.0
species: 904256

990363
type: SpeciesReference
stoichiometry: 1.0
species: 895269

990375
type: SpeciesReference
stoichiometry: 1.0
species: 895401

895401
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: bicarbonate [cytoplasm]

990387
type: SpeciesReference
stoichiometry: 1.0
species: 905108

905108
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: pyruvate [cytoplasm]

990423
type: SpeciesReference
stoichiometry: 1.0
species: 903812

915391
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PYC2 [cytoplasm]

990411
type: SpeciesReference
stoichiometry: 1.0
species: 899037

990399
type: SpeciesReference
stoichiometry: 1.0
species: 894813

944398
type: Reaction
is: SBO:0000176
product: 944434
notes: GENE_ASSOCIATION:YNL256W
reversible: true
fast: false
modifier: 944446
name: dihydroneopterin aldolase
reactant: 944410
product: 944422

944434
type: SpeciesReference
stoichiometry: 1.0
species: 898857

910988
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: FOL1 [mitochondrion]

944410
type: SpeciesReference
stoichiometry: 1.0
species: 894344

894344
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 7,8-dihydroneopterin [mitochondrion]

944422
type: SpeciesReference
stoichiometry: 1.0
species: 892362

892362
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 2-amino-6-(hydroxymethyl)-7,8-dihydropteridin-4-ol [mitochondrion]

909644
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: CHO1 [mitochondrion]

954928
type: Reaction
fast: false
modifier: meta s 2750 b r 0454
modifier: meta s 2367 b r 0454
is: SBO:0000176
notes: GENE_ASSOCIATION:(YJR051W or (YDR178W and YJL045W and YKL141W and YLL041C) or (YDR178W and YKL141W and YKL148C and YLL041C))
modifier: meta s 2749 b r 0454
product: 954976
reversible: true
name: fumarate reductase
product: 954964
reactant: 954952
reactant: 954940

914335
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: OSM1 [mitochondrion]

954976
type: SpeciesReference
stoichiometry: 1.0
species: 905768

954964
type: SpeciesReference
stoichiometry: 1.0
species: 897969

954952
type: SpeciesReference
stoichiometry: 1.0
species: 898389

954940
type: SpeciesReference
stoichiometry: 1.0
species: 897993

966650
type: Reaction
reversible: true
reactant: 966674
modifier: meta s 2246 b r 0616
notes: GENE_ASSOCIATION:YER019W
name: IPS phospholipase C
product: 966698
fast: false
reactant: 966662
product: 966686
is: SBO:0000176

966674
type: SpeciesReference
stoichiometry: 1.0
species: 900057

966698
type: SpeciesReference
stoichiometry: 1.0
species: 895713

895713
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ceramide-1 (C24) [mitochondrion]

966662
type: SpeciesReference
stoichiometry: 1.0
species: 899193

966686
type: SpeciesReference
stoichiometry: 1.0
species: 892180

902481
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: mannosylinositol phosphorylceramide C (C24) [endoplasmic reticulum]

901617
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-saccharopine [cytoplasm]

935580
type: Reaction
fast: false
product: 935628
name: biotin-[acetyl-CoA-carboxylase] ligase
product: 935640
notes: GENE_ASSOCIATION:YDL141W
modifier: meta s 1951 b r 0230
reactant: 935592
reactant: 935604
is: SBO:0000176
reactant: 935616
reversible: true

935628
type: SpeciesReference
stoichiometry: 1.0
species: 895449

935640
type: SpeciesReference
stoichiometry: 1.0
species: 897369

909344
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: BPL1 [cytoplasm]

935592
type: SpeciesReference
stoichiometry: 1.0
species: 895269

935604
type: SpeciesReference
stoichiometry: 1.0
species: 895425

935616
type: SpeciesReference
stoichiometry: 1.0
species: 899037

913447
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MAL32 [cytoplasm]

966710
type: Reaction
reactant: 966734
reversible: true
product: 966758
is: SBO:0000176
name: IPS phospholipase C
notes: GENE_ASSOCIATION:YER019W
fast: false
modifier: meta s 2246 b r 0617
product: 966746
reactant: 966722

966734
type: SpeciesReference
stoichiometry: 1.0
species: 900093

900093
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: inositol-P-ceramide A (C26) [mitochondrion]

966758
type: SpeciesReference
stoichiometry: 1.0
species: 895749

895749
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ceramide-1 (C26) [mitochondrion]

966746
type: SpeciesReference
stoichiometry: 1.0
species: 892180

966722
type: SpeciesReference
stoichiometry: 1.0
species: 899193

913639
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MET22 [cytoplasm]

909980
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: DAL5 [cell envelope]

896445
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: cytidine [cytoplasm]

903872
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: oxygen [mitochondrion]

892845
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3',5'-cyclic GMP [cytoplasm]

000977
type: Reaction
reactant: 001001
is: SBO:0000176
notes: GENE_ASSOCIATION:YJR133W
product: 001025
reversible: true
product: 001013
reactant: 000989
fast: false
modifier: 001037
name: xanthine phosphoribosyltransferase

001001
type: SpeciesReference
stoichiometry: 1.0
species: 904952

001025
type: SpeciesReference
stoichiometry: 1.0
species: 906776

001013
type: SpeciesReference
stoichiometry: 1.0
species: 897369

000989
type: SpeciesReference
stoichiometry: 1.0
species: 894452

917442
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: XPT1 [cytoplasm]

995614
type: Reaction
is: SBO:0000176
reactant: 995626
reactant: 995638
notes: GENE_ASSOCIATION:YLR020C
product: 995662
name: steryl ester hydrolase
product: 995650
fast: false
reversible: true
modifier: meta s 2630 b r 1018

995626
type: SpeciesReference
stoichiometry: 1.0
species: 898161

898161
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: fecosterol ester [cell envelope]

995638
type: SpeciesReference
stoichiometry: 1.0
species: 899145

995662
type: SpeciesReference
stoichiometry: 1.0
species: 898101

898101
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: fecosterol [cell envelope]

995650
type: SpeciesReference
stoichiometry: 1.0
species: 898029

898029
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: fatty acid [cell envelope]

913591
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MET13 [cytoplasm]

896529
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: D-erythrose 4-phosphate(2-) [cytoplasm]

893432
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3-phospho-serine [cytoplasm]

957891
type: Reaction
name: glycerol-3-phosphate dehydrogenase (NAD)
notes: GENE_ASSOCIATION:YOL059W
product: 957951
product: 957939
reactant: 957903
reversible: true
fast: false
reactant: 957915
reactant: 957927
modifier: 957963
is: SBO:0000176

957951
type: SpeciesReference
stoichiometry: 1.0
species: 903104

957939
type: SpeciesReference
stoichiometry: 1.0
species: 898797

898797
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: glycerol 3-phosphate [mitochondrion]

957903
type: SpeciesReference
stoichiometry: 1.0
species: 897357

897357
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: dihydroxyacetone phosphate [mitochondrion]

957915
type: SpeciesReference
stoichiometry: 1.0
species: 899097

957927
type: SpeciesReference
stoichiometry: 1.0
species: 903164

911492
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: GPD2 [mitochondrion]

006860
type: Reaction
modifier: meta s 2080 b r 1178
product: 006884
reactant: 006872
notes: GENE_ASSOCIATION:YMR319C
is: SBO:0000185
fast: false
reversible: true
name: iron (II) transport

910892
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: FET4 [cell envelope]

006884
type: SpeciesReference
stoichiometry: 1.0
species: 900393

006872
type: SpeciesReference
stoichiometry: 1.0
species: 900405

900405
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: iron(2+) [extracellular]

912295
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HXK1 [cytoplasm]

953692
type: Reaction
modifier: 953812
modifier: 953800
is: SBO:0000176
reversible: true
modifier: 953776
product: 953740
reactant: 953704
name: ferrocytochrome-c:oxygen oxidoreductase
fast: false
product: 953764
reactant: 953716
reactant: 953728
notes: GENE_ASSOCIATION:((Q0045 and Q0250 and Q0275 and YDL067C and YEL039C and YGL187C and YGL191W and YHR051W and YIL111W and YLR038C and YLR395C and YMR256C) or (Q0045 and Q0250 and Q0275 and YDL067C and YEL039C and YGL187C and YGL191W and YHR051W and YLR038C and YLR395C and YMR256C and YNL052W) or (Q0045 and Q0250 and Q0275 and YDL067C and YGL187C and YGL191W and YHR051W and YIL111W and YJR048W and YLR038C and YLR395C and YMR256C) or (Q0045 and Q0250 and Q0275 and YDL067C and YGL187C and YGL191W and YHR051W and YJR048W and YLR038C and YLR395C and YMR256C and YNL052W))
modifier: 953788
product: 953752

918066
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: COX1:COX12:COX13:COX2:COX3:COX4:COX5B:COX6:COX7:COX8:COX9:CYC7 [mitochondrial membrane]

918054
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: COX1:COX12:COX13:COX2:COX3:COX4:COX5B:COX6:COX7:COX8:COX9:CYC1 [mitochondrial membrane]

918030
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: COX1:COX12:COX13:COX2:COX3:COX4:COX5A:COX6:COX7:COX8:COX9:CYC1 [mitochondrial membrane]

953740
type: SpeciesReference
stoichiometry: 4.0
species: 898209

953704
type: SpeciesReference
stoichiometry: 4.0
species: 898221

953764
type: SpeciesReference
stoichiometry: 2.0
species: 899193

953716
type: SpeciesReference
stoichiometry: 2.0
species: 899097

953728
type: SpeciesReference
stoichiometry: 1.0
species: 903872

918042
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: COX1:COX12:COX13:COX2:COX3:COX4:COX5A:COX6:COX7:COX8:COX9:CYC7 [mitochondrial membrane]

953752
type: SpeciesReference
stoichiometry: 2.0
species: 899037

916559
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: TGL3 [lipid particle]

946090
type: Reaction
modifier: meta s 2664 b r 0372
reactant: 946102
reactant: 946114
fast: false
is: SBO:0000176
notes: GENE_ASSOCIATION:(YGL155W and YKL019W)
product: 946126
name: farnesyltransferase to proteins with CAAX motif at C-terminus, where X={ser,cys,Met,ala}
reversible: true

917994
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: CDC43:RAM2 [endoplasmic reticulum]

946102
type: SpeciesReference
stoichiometry: 1.0
species: 898005

898005
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: farnesyl diphosphate [endoplasmic reticulum]

946114
type: SpeciesReference
stoichiometry: 1.0
species: 915139

915139
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: protein with CAAX motif at C terminal, X={Leu,Phe} [endoplasmic reticulum]

946126
type: SpeciesReference
stoichiometry: 1.0
species: 907604

907604
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: geranylgeranylated protein with AAX motif at C terminal, X={Leu,Phe} [endoplasmic reticulum]

911516
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 05
name: GPI10 [endoplasmic reticulum membrane]

901509
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-methionine [cytoplasm]

918234
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: CYC7:DLD3 [mitochondrial membrane]

011792
type: Reaction
fast: false
modifier: meta s 2574 b r 1251
reversible: true
reactant: 011816
product: 011840
is: SBO:0000185
reactant: 011804
modifier: meta s 2568 b r 1251
name: putrescine transport
product: 011828
notes: GENE_ASSOCIATION:(YLL028W or YOR273C)

011816
type: SpeciesReference
stoichiometry: 1.0
species: 905000

905000
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: putrescine [extracellular]

011840
type: SpeciesReference
stoichiometry: 1.0
species: 904988

904988
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: putrescine [cytoplasm]

011804
type: SpeciesReference
stoichiometry: 1.0
species: 899037

916840
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: TPO1 [cell envelope]

011828
type: SpeciesReference
stoichiometry: 1.0
species: 899061

925787
type: Reaction
name: acetaldehyde condensation
reversible: true
notes: GENE_ASSOCIATION:(YGR087C or YLR044C or YLR134W)
product: 925811
fast: false
reactant: 925799
modifier: meta s 2375 b r 0095
modifier: meta s 2373 b r 0095
is: SBO:0000176
modifier: meta s 2374 b r 0095

925811
type: SpeciesReference
stoichiometry: 1.0
species: 891021

891021
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (R)-acetoin [cytoplasm]

925799
type: SpeciesReference
stoichiometry: 2.0
species: 894464

894464
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: acetaldehyde [cytoplasm]

914431
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PDC6 [cytoplasm]

914407
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PDC1 [cytoplasm]

914419
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PDC5 [cytoplasm]

902757
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: myo-inositol hexakisphosphate [nucleus]

974345
type: Reaction
name: methionyl-tRNA synthetase
fast: false
product: 974393
modifier: meta s 2301 b r 0729
product: 974405
notes: GENE_ASSOCIATION:YGR264C
reversible: true
is: SBO:0000176
reactant: 974381
product: 974417
reactant: 974357
reactant: 974369

974393
type: SpeciesReference
stoichiometry: 1.0
species: 895137

913543
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MES1 [cytoplasm]

974405
type: SpeciesReference
stoichiometry: 1.0
species: 897369

974381
type: SpeciesReference
stoichiometry: 1.0
species: 907196

907196
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: tRNA(Met), cytoplasmic [cytoplasm]

974417
type: SpeciesReference
stoichiometry: 1.0
species: 902625

902625
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: Met-tRNA(Met) [cytoplasm]

974357
type: SpeciesReference
stoichiometry: 1.0
species: 895269

974369
type: SpeciesReference
stoichiometry: 1.0
species: 901509

950560
type: Reaction
notes: GENE_ASSOCIATION:(YIL009W or YMR246W or YOR317W)
modifier: 950668
product: 950620
reactant: 950596
name: fatty-acid--CoA ligase (octadecynoate)
modifier: 950644
fast: false
reversible: true
reactant: 950584
reactant: 950572
product: 950608
is: SBO:0000176
product: 950632
modifier: 950656

950620
type: SpeciesReference
stoichiometry: 1.0
species: 897369

950596
type: SpeciesReference
stoichiometry: 1.0
species: 902097

902097
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: linoleic acid [cytoplasm]

950584
type: SpeciesReference
stoichiometry: 1.0
species: 896313

950572
type: SpeciesReference
stoichiometry: 1.0
species: 895269

950608
type: SpeciesReference
stoichiometry: 1.0
species: 895137

950632
type: SpeciesReference
stoichiometry: 1.0
species: 903596

903596
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: octadec-9-ynoyl-CoA [cytoplasm]

968090
type: Reaction
notes: GENE_ASSOCIATION:YER019W
reactant: 968102
product: 968138
name: IPS phospholipase C
reactant: 968114
modifier: meta s 2246 b r 0640
is: SBO:0000176
product: 968126
fast: false
reversible: true

968102
type: SpeciesReference
stoichiometry: 1.0
species: 899193

968138
type: SpeciesReference
stoichiometry: 1.0
species: 902229

968114
type: SpeciesReference
stoichiometry: 1.0
species: 899769

899769
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: inositol phosphomannosylinositol phosphoceramide B (C24) [mitochondrion]

968126
type: SpeciesReference
stoichiometry: 1.0
species: 895785

895785
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ceramide-2 (C24) [mitochondrion]

006668
type: Reaction
name: guanine transport
product: 006716
modifier: 006752
fast: false
notes: GENE_ASSOCIATION:(YER056C or YER060W or YER060W-A or YGL186C)
is: SBO:0000185
modifier: 006740
reactant: 006692
reversible: true
modifier: 006728
reactant: 006680
product: 006704
modifier: 006764

006716
type: SpeciesReference
stoichiometry: 1.0
species: 899037

910844
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: FCY22 [cell envelope]

910832
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: FCY21 [cell envelope]

006692
type: SpeciesReference
stoichiometry: 1.0
species: 899061

006680
type: SpeciesReference
stoichiometry: 1.0
species: 898977

006704
type: SpeciesReference
stoichiometry: 1.0
species: 898965

916828
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: TPN1 [cell envelope]

927587
type: Reaction
reactant: 927599
product: 927635
reactant: 927611
reversible: true
modifier: 927647
is: SBO:0000176
name: acyl-CoA oxidase (decanoyl-CoA)
fast: false
notes: GENE_ASSOCIATION:YGL205W
product: 927623

927599
type: SpeciesReference
stoichiometry: 1.0
species: 897045

927635
type: SpeciesReference
stoichiometry: 1.0
species: 906224

906224
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: trans-dec-2-enoyl-CoA [peroxisome]

927611
type: SpeciesReference
stoichiometry: 1.0
species: 903884

927623
type: SpeciesReference
stoichiometry: 1.0
species: 899493

917286
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: UTR1 [mitochondrion]

922882
type: Reaction
product: 922918
notes: GENE_ASSOCIATION:YKR009C
modifier: 922954
name: 3-hydroxyacyl-CoA dehydrogenase (3-oxohexacosyl-CoA)
reactant: 922894
fast: false
reversible: true
reactant: 922906
product: 922942
is: SBO:0000176
product: 922930

922918
type: SpeciesReference
stoichiometry: 1.0
species: 893300

893300
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: 3-oxohexacosanoyl-CoA [peroxisome]

922894
type: SpeciesReference
stoichiometry: 1.0
species: 891287

891287
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: (S)-3-hydroxyhexacosanoyl-CoA [peroxisome]

922906
type: SpeciesReference
stoichiometry: 1.0
species: 903128

922942
type: SpeciesReference
stoichiometry: 1.0
species: 903176

922930
type: SpeciesReference
stoichiometry: 1.0
species: 899121

908540
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ALO1 [cytoplasm]

921137
type: Reaction
fast: false
reactant: 921174
name: 2-methylcitrate synthase
reactant: 921149
reversible: true
product: 921212
modifier: meta s 1983 b r 0028
notes: GENE_ASSOCIATION:YPR001W
reactant: 921161
product: 921187
is: SBO:0000176
product: 921199

921174
type: SpeciesReference
stoichiometry: 1.0
species: 904904

904904
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: propionyl-CoA [mitochondrion]

921149
type: SpeciesReference
stoichiometry: 1.0
species: 899193

921212
type: SpeciesReference
stoichiometry: 1.0
species: 899097

921161
type: SpeciesReference
stoichiometry: 1.0
species: 903824

921187
type: SpeciesReference
stoichiometry: 1.0
species: 892616

892616
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 2-methylcitrate(3-) [mitochondrion]

921199
type: SpeciesReference
stoichiometry: 1.0
species: 896349

929926
type: Reaction
reactant: 929950
reversible: true
notes: GENE_ASSOCIATION:YGR247W
product: 929974
is: SBO:0000176
reactant: 929938
reactant: 929962
fast: false
modifier: meta s 1988 b r 0155
name: ADP-ribose 2,3-cyclic phosphodiesterase

929950
type: SpeciesReference
stoichiometry: 1.0
species: 899037

929974
type: SpeciesReference
stoichiometry: 1.0
species: 894765

894765
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: adenosine 2'-phosphate [cytoplasm]

929938
type: SpeciesReference
stoichiometry: 1.0
species: 892204

892204
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2',3'-cyclic AMP [cytoplasm]

929962
type: SpeciesReference
stoichiometry: 1.0
species: 899145

909788
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CPD1 [cytoplasm]

896481
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: cytosine [extracellular]

922798
type: Reaction
notes: GENE_ASSOCIATION:YKR009C
modifier: 922870
reversible: true
reactant: 922834
product: 922846
reactant: 922810
reactant: 922822
fast: false
name: 3-hydroxyacyl-CoA dehydrogenase (3-oxodecanoyl-CoA)
is: SBO:0000176
product: 922858

922834
type: SpeciesReference
stoichiometry: 1.0
species: 903176

922846
type: SpeciesReference
stoichiometry: 1.0
species: 891299

891299
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: (S)-3-hydroxylauroyl-CoA [peroxisome]

922810
type: SpeciesReference
stoichiometry: 1.0
species: 893324

922822
type: SpeciesReference
stoichiometry: 1.0
species: 899121

922858
type: SpeciesReference
stoichiometry: 1.0
species: 903128

912331
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HXT10 [cell envelope]

944590
type: Reaction
is: SBO:0000176
product: 944638
reactant: 944614
reactant: 944602
notes: GENE_ASSOCIATION:YNL256W
product: 944626
modifier: 944650
reversible: true
name: dihydropteroate synthase
fast: false

944638
type: SpeciesReference
stoichiometry: 1.0
species: 899193

944614
type: SpeciesReference
stoichiometry: 1.0
species: 893564

893564
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 4-aminobenzoate [mitochondrion]

944602
type: SpeciesReference
stoichiometry: 1.0
species: 892362

944626
type: SpeciesReference
stoichiometry: 1.0
species: 894392

894392
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 7,8-dihydropteroate [mitochondrion]

906104
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: thymidine [cytoplasm]

909176
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: BDH1 [cytoplasm]

897153
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dGMP [cytoplasm]

010064
type: Reaction
modifier: 010160
reversible: true
modifier: 010172
modifier: 010148
product: 010100
notes: GENE_ASSOCIATION:(YBR068C or YBR069C or YCL025C or YDR046C or YKR039W or YOL020W)
modifier: 010124
is: SBO:0000185
reactant: 010076
modifier: 010136
reactant: 010088
fast: false
product: 010112
name: L-tyrosine transport
modifier: 010184

010100
type: SpeciesReference
stoichiometry: 1.0
species: 899037

010076
type: SpeciesReference
stoichiometry: 1.0
species: 899061

010088
type: SpeciesReference
stoichiometry: 1.0
species: 901773

901773
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: L-tyrosine [extracellular]

010112
type: SpeciesReference
stoichiometry: 1.0
species: 901761

916455
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: TAT2 [cell envelope]

910376
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ENO1 [cytoplasm]

897537
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: dTDP [nucleus]

906080
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: Thr-tRNA(Thr) [cytoplasm]

987795
type: Reaction
is: SBO:0000176
notes: GENE_ASSOCIATION:YDR297W
reactant: 987807
reactant: 987831
product: 987879
product: 987867
fast: false
reactant: 987843
product: 987855
reactant: 987819
name: phytosphingosine synthesis
modifier: meta s 2532 b r 0922
reversible: true

987807
type: SpeciesReference
stoichiometry: 1.0
species: 899049

987831
type: SpeciesReference
stoichiometry: 1.0
species: 903860

987879
type: SpeciesReference
stoichiometry: 1.0
species: 904760

987867
type: SpeciesReference
stoichiometry: 1.0
species: 903200

987843
type: SpeciesReference
stoichiometry: 1.0
species: 905636

987855
type: SpeciesReference
stoichiometry: 1.0
species: 899157

987819
type: SpeciesReference
stoichiometry: 1.0
species: 903248

916377
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: SUR2 [endoplasmic reticulum]

918800
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: PMA2:PMP1:PMP2 [cell envelope]

995266
type: Reaction
product: 995350
reactant: 995290
reversible: true
product: 995326
product: 995338
modifier: 995362
notes: GENE_ASSOCIATION:YGL055W
fast: false
name: stearoyl-CoA desaturase (n-C18:0CoA -> n-C18:1CoA)
reactant: 995302
reactant: 995278
reactant: 995314
is: SBO:0000176

995350
type: SpeciesReference
stoichiometry: 1.0
species: 903716

995290
type: SpeciesReference
stoichiometry: 1.0
species: 903236

995326
type: SpeciesReference
stoichiometry: 2.0
species: 899145

995338
type: SpeciesReference
stoichiometry: 1.0
species: 903188

914263
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: OLE1 [cytoplasm]

995302
type: SpeciesReference
stoichiometry: 1.0
species: 903848

995278
type: SpeciesReference
stoichiometry: 1.0
species: 899037

995314
type: SpeciesReference
stoichiometry: 1.0
species: 905732

919631
type: Reaction
modifier: 919667
product: 919655
reactant: 919643
notes: GENE_ASSOCIATION:YIL020C
is: SBO:0000176
fast: false
reversible: true
name: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase

912068
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HIS6 [cytoplasm]

919655
type: SpeciesReference
stoichiometry: 1.0
species: 893984

893984
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5-[(5-phospho-1-deoxy-D-ribulos-1-ylamino)methylideneamino]-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide [cytoplasm]

919643
type: SpeciesReference
stoichiometry: 1.0
species: 891564

891564
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 1-(5-phospho-D-ribosyl)-5-[(5-phospho-D-ribosylamino)methylideneamino]imidazole-4-carboxamide [cytoplasm]

914707
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: PHO3 [extracellular]

901521
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: L-methionine [extracellular]

994978
type: Reaction
notes: GENE_ASSOCIATION:((YGR175C and YIL043C and YNL111C) or (YGR175C and YKL150W and YNL111C))
reactant: 995026
product: 995038
product: 995062
modifier: meta s 2659 b r 1010
reactant: 995002
is: SBO:0000176
reversible: true
name: squalene epoxidase (NAD)
product: 995050
fast: false
modifier: meta s 2677 b r 1010
reactant: 994990
reactant: 995014

995026
type: SpeciesReference
stoichiometry: 1.0
species: 905672

905672
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: squalene [endoplasmic reticulum]

995038
type: SpeciesReference
stoichiometry: 1.0
species: 891239

891239
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: (S)-2,3-epoxysqualene [endoplasmic reticulum]

995062
type: SpeciesReference
stoichiometry: 1.0
species: 903092

903092
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: NAD [endoplasmic reticulum]

917934
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: CBR1:CYB5:ERG1 [endoplasmic reticulum]

995002
type: SpeciesReference
stoichiometry: 1.0
species: 903152

903152
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: NADH [endoplasmic reticulum]

995050
type: SpeciesReference
stoichiometry: 1.0
species: 899157

918150
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: CYB5:ERG1:MCR1 [endoplasmic reticulum]

994990
type: SpeciesReference
stoichiometry: 1.0
species: 899049

995014
type: SpeciesReference
stoichiometry: 1.0
species: 903860

914491
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PDX3 [cytoplasm]

972532
type: Reaction
reactant: 972556
fast: false
notes: GENE_ASSOCIATION:YNL045W
modifier: meta s 2265 b r 0703
name: leukotriene A4 hydrolase
reversible: true
reactant: 972544
product: 972568
is: SBO:0000176

972556
type: SpeciesReference
stoichiometry: 1.0
species: 902013

902013
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: leukotriene A4 [cytoplasm]

913111
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: LAP2 [cytoplasm]

972544
type: SpeciesReference
stoichiometry: 1.0
species: 899145

972568
type: SpeciesReference
stoichiometry: 1.0
species: 890937

890937
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (5S,6S)-di-HETE [cytoplasm]

912415
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HXT2 [cell envelope]

896433
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: Cys-tRNA(Cys) [cytoplasm]

999393
type: Reaction
modifier: 999429
product: 999417
reactant: 999405
notes: GENE_ASSOCIATION:YBR019C
is: SBO:0000176
fast: false
reversible: true
name: UDPglucose 4-epimerase

911144
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GAL10 [cytoplasm]

999417
type: SpeciesReference
stoichiometry: 1.0
species: 906500

999405
type: SpeciesReference
stoichiometry: 1.0
species: 906524

982120
type: Reaction
product: 982180
fast: false
reactant: 982132
reactant: 982144
is: SBO:0000176
product: 982168
reversible: true
notes: GENE_ASSOCIATION:YGR277C
reactant: 982156
name: pantetheine-phosphate adenylyltransferase
modifier: meta s 1958 b r 0841

982180
type: SpeciesReference
stoichiometry: 1.0
species: 897369

982132
type: SpeciesReference
stoichiometry: 1.0
species: 895269

982144
type: SpeciesReference
stoichiometry: 1.0
species: 899037

982168
type: SpeciesReference
stoichiometry: 1.0
species: 892869

892869
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3'-dephospho-CoA [cytoplasm]

982156
type: SpeciesReference
stoichiometry: 1.0
species: 904088

904088
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: pantetheine 4'-phosphate [cytoplasm]

909428
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CAB4 [cytoplasm]

960795
type: Reaction
name: Heme O synthase
product: 960843
reactant: 960831
is: SBO:0000176
modifier: meta s 1987 b r 0531
product: 960855
reactant: 960819
reactant: 960807
fast: false
reversible: true
notes: GENE_ASSOCIATION:YPL172C

960843
type: SpeciesReference
stoichiometry: 1.0
species: 897405

960831
type: SpeciesReference
stoichiometry: 1.0
species: 899193

909776
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: COX10 [mitochondrion]

960855
type: SpeciesReference
stoichiometry: 1.0
species: 899253

899253
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: heme o [mitochondrion]

960819
type: SpeciesReference
stoichiometry: 1.0
species: 898233

960807
type: SpeciesReference
stoichiometry: 1.0
species: 892797

892797
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 2-trans,6-trans-farnesyl diphosphate [mitochondrion]

947957
type: Reaction
reactant: 947969
product: 948053
reactant: 948005
modifier: 948077
product: 948017
product: 948065
name: fatty acid synthase (n-C14:0)
reactant: 947981
product: 948041
notes: GENE_ASSOCIATION:(YGR037C and YKL182W and YNR016C and YPL231W)
product: 948029
reactant: 947993
is: SBO:0000176
reversible: true
fast: false

947969
type: SpeciesReference
stoichiometry: 3.0
species: 899037

948053
type: SpeciesReference
stoichiometry: 1.0
species: 902769

948005
type: SpeciesReference
stoichiometry: 2.0
species: 903236

948017
type: SpeciesReference
stoichiometry: 1.0
species: 895485

948065
type: SpeciesReference
stoichiometry: 2.0
species: 903188

947981
type: SpeciesReference
stoichiometry: 1.0
species: 901917

901917
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: laurate [cytoplasm]

948041
type: SpeciesReference
stoichiometry: 1.0
species: 899145

948029
type: SpeciesReference
stoichiometry: 1.0
species: 896313

947993
type: SpeciesReference
stoichiometry: 1.0
species: 902157

904112
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: pectin [extracellular]

893252
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 3-methylbutanal [mitochondrion]

897381
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: diphosphate [endoplasmic reticulum]

911420
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GNA1 [cytoplasm]

978124
type: Reaction
product: 978160
reversible: true
is: SBO:0000176
reactant: 978136
product: 978172
notes: GENE_ASSOCIATION:YGL037C
reactant: 978148
fast: false
modifier: 978184
name: nicotinamidase

978160
type: SpeciesReference
stoichiometry: 1.0
species: 895089

978136
type: SpeciesReference
stoichiometry: 1.0
species: 899145

978172
type: SpeciesReference
stoichiometry: 1.0
species: 903320

903320
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: nicotinate [cytoplasm]

978148
type: SpeciesReference
stoichiometry: 1.0
species: 903284

915007
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PNC1 [cytoplasm]

897573
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dUDP [cytoplasm]

904940
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: protoporphyrinogen [mitochondrion]

901413
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-leucine [cytoplasm]

899709
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: inositol phosphomannosylinositol phosphoceramide A (C26) [endoplasmic reticulum]

913567
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MET10 [cytoplasm]

984327
type: Reaction
reactant: 984351
reversible: true
product: 984387
reactant: 984339
is: SBO:0000176
product: 984375
fast: false
modifier: 984399
product: 984363
name: phosphatidylinositol phosphate phosphatase
notes: GENE_ASSOCIATION:YKL212W

984351
type: SpeciesReference
stoichiometry: 1.0
species: 899157

984387
type: SpeciesReference
stoichiometry: 1.0
species: 904268

904268
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: phosphate [endoplasmic reticulum]

984339
type: SpeciesReference
stoichiometry: 1.0
species: 891866

891866
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 1-phosphatidyl-1D-myo-inositol 3-phosphate [endoplasmic reticulum]

984375
type: SpeciesReference
stoichiometry: 2.0
species: 899049

915727
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: SAC1 [endoplasmic reticulum]

984363
type: SpeciesReference
stoichiometry: 1.0
species: 891721

891721
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 1-phosphatidyl-1D-myo-inositol [endoplasmic reticulum]

981760
type: Reaction
notes: GENE_ASSOCIATION:YDR126W
name: palmitoyl transferase for SNarE YAL030W
reactant: 981772
is: SBO:0000176
modifier: meta s 2533 b r 0835
fast: false
reactant: 981784
reversible: true
product: 981796

981772
type: SpeciesReference
stoichiometry: 1.0
species: 904040

916390
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SWF1 [cytoplasm]

981784
type: SpeciesReference
stoichiometry: 1.0
species: 916104

916104
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SNC1 [cytoplasm]

981796
type: SpeciesReference
stoichiometry: 1.0
species: 907748

907748
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: palmitoylated YAL030W [cytoplasm]

899661
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: inosine [cytoplasm]

934296
type: Reaction
reactant: 934320
product: 934344
name: asparaginyl-tRNA synthetase, miotchondrial
fast: false
notes: GENE_ASSOCIATION:YCR024C
modifier: meta s 2510 b r 0213
product: 934356
reversible: true
reactant: 934332
product: 934368
is: SBO:0000176
reactant: 934308

934320
type: SpeciesReference
stoichiometry: 1.0
species: 900873

934344
type: SpeciesReference
stoichiometry: 1.0
species: 895149

916091
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: SLM5 [mitochondrion]

934356
type: SpeciesReference
stoichiometry: 1.0
species: 895233

895233
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: Asn-tRNA(Asn) [mitochondrion]

934332
type: SpeciesReference
stoichiometry: 1.0
species: 907004

907004
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: tRNA(Asn), mitchondrial [mitochondrion]

934368
type: SpeciesReference
stoichiometry: 1.0
species: 897405

934308
type: SpeciesReference
stoichiometry: 1.0
species: 895305

934092
type: Reaction
reactant: 934104
reactant: 934140
is: SBO:0000176
fast: false
reversible: true
reactant: 934116
product: 934176
modifier: meta s 1915 b r 0211
name: asparagine synthase (glutamine-hydrolysing)
product: 934188
product: 934152
notes: GENE_ASSOCIATION:(YGR124W or YPR145W)
modifier: meta s 1916 b r 0211
product: 934164
reactant: 934128
product: 934200

934104
type: SpeciesReference
stoichiometry: 1.0
species: 895269

934140
type: SpeciesReference
stoichiometry: 1.0
species: 901185

934116
type: SpeciesReference
stoichiometry: 1.0
species: 899145

934176
type: SpeciesReference
stoichiometry: 1.0
species: 899037

908912
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ASN1 [cytoplasm]

934188
type: SpeciesReference
stoichiometry: 1.0
species: 900849

934152
type: SpeciesReference
stoichiometry: 1.0
species: 895137

908924
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ASN2 [cytoplasm]

934164
type: SpeciesReference
stoichiometry: 1.0
species: 897369

934128
type: SpeciesReference
stoichiometry: 1.0
species: 900897

934200
type: SpeciesReference
stoichiometry: 1.0
species: 901101

905084
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: pyridoxine [extracellular]

962535
type: Reaction
name: hydroxyacylglutathione hydrolase
reactant: 962547
reactant: 962559
product: 962571
product: 962595
notes: GENE_ASSOCIATION:YOR040W
is: SBO:0000176
reversible: true
product: 962583
fast: false
modifier: 962607

962547
type: SpeciesReference
stoichiometry: 1.0
species: 891190

891190
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: (R)-S-lactoylglutathione [mitochondrion]

962559
type: SpeciesReference
stoichiometry: 1.0
species: 899193

962571
type: SpeciesReference
stoichiometry: 1.0
species: 891106

891106
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: (R)-lactate [mitochondrion]

962595
type: SpeciesReference
stoichiometry: 1.0
species: 899097

962583
type: SpeciesReference
stoichiometry: 1.0
species: 898593

911384
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: GLO4 [mitochondrion]

012512
type: Reaction
notes: GENE_ASSOCIATION:(YLL028W or YGR138C or YPR156C or YOR273C)
is: SBO:0000185
name: spermine transport
reactant: 012524
modifier: meta s 2575 b r 1263
product: 012548
modifier: meta s 2573 b r 1263
fast: false
product: 012560
reversible: true
reactant: 012536
modifier: meta s 2571 b r 1263
modifier: meta s 2569 b r 1263

012524
type: SpeciesReference
stoichiometry: 1.0
species: 899133

916925
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 16
name: TPO4 [vacuolar membrane]

012548
type: SpeciesReference
stoichiometry: 1.0
species: 899037

916901
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 16
name: TPO3 [vacuolar membrane]

012560
type: SpeciesReference
stoichiometry: 1.0
species: 905624

012536
type: SpeciesReference
stoichiometry: 1.0
species: 905600

905600
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: spermine [cytoplasm]

918355
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ERG11:NCP1 [cytoplasm]

992390
type: Reaction
modifier: 992558
reversible: true
reactant: 992403
product: 992454
modifier: 992532
product: 992429
name: ribonucleotide reductase
modifier: 992467
modifier: 992545
modifier: 992480
modifier: 992519
modifier: 992506
reactant: 992416
notes: GENE_ASSOCIATION:(YER070W or YJL026W or YIL066C or YGR180C or (YER070W and YJL026W) or (YER070W and YGR180C) or (YER070W and YJL026W) or (YGR180C and YIL066C))
modifier: 992493
product: 992441
fast: false
is: SBO:0000176

992403
type: SpeciesReference
stoichiometry: 1.0
species: 898437

992454
type: SpeciesReference
stoichiometry: 1.0
species: 907412

918944
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: RNR1:RNR4 [cytoplasm]

992429
type: SpeciesReference
stoichiometry: 1.0
species: 897129

915610
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: RNR1 [cytoplasm]

918968
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: RNR2:RNR3 [cytoplasm]

915636
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: RNR2 [cytoplasm]

918920
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: RNR1:RNR2 [cytoplasm]

915688
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: RNR4 [cytoplasm]

992416
type: SpeciesReference
stoichiometry: 1.0
species: 907364

915662
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: RNR3 [cytoplasm]

992441
type: SpeciesReference
stoichiometry: 1.0
species: 899145

897465
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: dodecaprenyl diphosphate [lipid particle]

meta r 1182
type: Reaction
product: 006980
reactant: 006968
notes: GENE_ASSOCIATION:
is described by: http://identifiers.org/pubmed/11583838
is: SBO:0000185
fast: false
reversible: true
name: isopentenyl diphosphate transport

006980
type: SpeciesReference
stoichiometry: 1.0
species: 900609

900609
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: isopentenyl diphosphate [mitochondrion]

006968
type: SpeciesReference
stoichiometry: 1.0
species: 900585

948485
type: Reaction
reactant: 948509
product: 948557
product: 948569
reactant: 948533
is: SBO:0000176
fast: false
reactant: 948497
reversible: true
product: 948593
notes: GENE_ASSOCIATION:(YGR037C and YKL182W and YNR016C and YPL231W)
reactant: 948521
name: fatty acid synthase (n-C18:0)
product: 948581
product: 948545
modifier: 948605

948509
type: SpeciesReference
stoichiometry: 1.0
species: 902157

948557
type: SpeciesReference
stoichiometry: 1.0
species: 896313

948569
type: SpeciesReference
stoichiometry: 1.0
species: 899145

948533
type: SpeciesReference
stoichiometry: 1.0
species: 903956

903956
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: palmitate [cytoplasm]

948497
type: SpeciesReference
stoichiometry: 3.0
species: 899037

948593
type: SpeciesReference
stoichiometry: 1.0
species: 905684

948521
type: SpeciesReference
stoichiometry: 2.0
species: 903236

948581
type: SpeciesReference
stoichiometry: 2.0
species: 903188

948545
type: SpeciesReference
stoichiometry: 1.0
species: 895485

891359
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (S)-3-methyl-2-oxopentanoate [cytoplasm]

957315
type: Reaction
modifier: 957411
name: glutathione synthetase
reactant: 957351
is: SBO:0000176
reactant: 957339
fast: false
product: 957399
product: 957375
product: 957387
notes: GENE_ASSOCIATION:YOL049W
reactant: 957327
product: 957363
reversible: true

911744
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GSH2 [cytoplasm]

957351
type: SpeciesReference
stoichiometry: 1.0
species: 901221

901221
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-glycine [cytoplasm]

957339
type: SpeciesReference
stoichiometry: 1.0
species: 901077

957399
type: SpeciesReference
stoichiometry: 1.0
species: 904256

957375
type: SpeciesReference
stoichiometry: 1.0
species: 898569

957387
type: SpeciesReference
stoichiometry: 1.0
species: 899037

957327
type: SpeciesReference
stoichiometry: 1.0
species: 895269

957363
type: SpeciesReference
stoichiometry: 1.0
species: 894813

894224
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 6-[6-(2-aminoethylphosphoryl)-alpha-mannosyl-(1->6)-2-(2-aminoethylphosphoryl)-alpha-mannosyl-(1->6)-alpha-2-(2-aminoethylphosphoryl)mannosyl-(1->4)-alpha-glucosaminyl]-O-acyl-1-phosphatidyl-1D-myo-inositol [endoplasmic reticulum]

971217
type: Reaction
modifier: 971295
product: 971269
product: 971256
reversible: true
reactant: 971243
fast: false
is: SBO:0000176
product: 971282
notes: GENE_ASSOCIATION:YHR037W
name: L-hydroxyproline dehydrogenase (NAD)
reactant: 971230

915343
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: PUT2 [mitochondrion]

971269
type: SpeciesReference
stoichiometry: 2.0
species: 899097

971256
type: SpeciesReference
stoichiometry: 1.0
species: 892047

892047
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 1-pyrroline-3-hydroxy-5-carboxylic acid [mitochondrion]

971243
type: SpeciesReference
stoichiometry: 1.0
species: 906188

906188
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: trans-4-hydroxy-L-proline [mitochondrion]

971282
type: SpeciesReference
stoichiometry: 1.0
species: 903164

971230
type: SpeciesReference
stoichiometry: 1.0
species: 903104

meta r 1098
type: Reaction
product: 001469
reactant: 001457
notes: GENE_ASSOCIATION:
is described by: http://identifiers.org/pubmed/10653746
is: SBO:0000185
fast: false
reversible: true
name: 2-methylbutyl transport

001469
type: SpeciesReference
stoichiometry: 1.0
species: 892604

892604
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: 2-methylbutyl acetate [extracellular]

001457
type: SpeciesReference
stoichiometry: 1.0
species: 892592

892592
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-methylbutyl acetate [cytoplasm]

945994
type: Reaction
is: SBO:0000176
reversible: true
name: exo-1,3-beta-glucan glucohydrase
reactant: 946018
modifier: meta s 2058 b r 0370
notes: GENE_ASSOCIATION:(YDR261C or YGR282C or YLR300W or YNR067C or YOR190W)
modifier: meta s 2520 b r 0370
modifier: meta s 2026 b r 0370
fast: false
product: 946030
modifier: meta s 1938 b r 0370
reactant: 946006
modifier: meta s 2059 b r 0370

946018
type: SpeciesReference
stoichiometry: 1.0
species: 899169

910628
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: EXG1 [extracellular]

910244
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: DSE4 [extracellular]

946030
type: SpeciesReference
stoichiometry: 1.0
species: 896685

909188
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: BGL2 [extracellular]

946006
type: SpeciesReference
stoichiometry: 1.0
species: 890827

890827
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: (1->3)-beta-D-glucan [extracellular]

910640
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: EXG2 [extracellular]

953008
type: Reaction
fast: false
product: 953116
product: 953092
name: fatty-acyl-CoA synthase (n-C12:0CoA)
product: 953068
reversible: true
reactant: 953056
product: 953104
product: 953080
reactant: 953044
notes: GENE_ASSOCIATION:(YGR037C and YKL182W and YNR016C and YPL231W)
reactant: 953020
modifier: 953128
reactant: 953032
is: SBO:0000176

953116
type: SpeciesReference
stoichiometry: 2.0
species: 903188

953092
type: SpeciesReference
stoichiometry: 1.0
species: 899145

953068
type: SpeciesReference
stoichiometry: 1.0
species: 895485

953056
type: SpeciesReference
stoichiometry: 2.0
species: 903236

953104
type: SpeciesReference
stoichiometry: 1.0
species: 901965

953080
type: SpeciesReference
stoichiometry: 1.0
species: 896313

953044
type: SpeciesReference
stoichiometry: 1.0
species: 902157

953020
type: SpeciesReference
stoichiometry: 1.0
species: 897033

897033
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: decanoyl-CoA [cytoplasm]

953032
type: SpeciesReference
stoichiometry: 3.0
species: 899037

901797
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: L-tyrosine [peroxisome]

914611
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PGK1 [cytoplasm]

903692
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: octaprenyl diphosphate [lipid particle]

979432
type: Reaction
reversible: true
product: 979468
reactant: 979444
name: nucleoside diphosphate kinase
fast: false
modifier: 979492
product: 979480
is: SBO:0000176
reactant: 979456
notes: GENE_ASSOCIATION:YKL067W

979468
type: SpeciesReference
stoichiometry: 1.0
species: 894813

979444
type: SpeciesReference
stoichiometry: 1.0
species: 895269

979480
type: SpeciesReference
stoichiometry: 1.0
species: 897177

897177
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dGTP [cytoplasm]

979456
type: SpeciesReference
stoichiometry: 1.0
species: 897129

907064
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: tRNA(Glu), cytoplasmic [cytoplasm]

905828
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: sulphate [extracellular]

915079
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: PPA2 [mitochondrion]

005961
type: Reaction
modifier: 006105
modifier: 006177
modifier: 006117
fast: false
reversible: true
is: SBO:0000185
modifier: 006153
name: glucose transport
reactant: 005973
modifier: 006165
modifier: meta s 2323 b r 1166
modifier: 006009
modifier: meta s 2322 b r 1166
modifier: 006057
modifier: 006141
modifier: 006069
modifier: 005997
modifier: 006045
modifier: 006188
product: 005985
notes: GENE_ASSOCIATION:(YDL245C or YDR342C or YDR343C or YDR345C or YDR536W or YEL069C or YFL011W or YHR092C or YHR094C or YHR096C or YJL214W or YJL219W or YJR158W or YLR081W or YMR011W or YNR072W or YOL156W or YDL247W or YDL247W)
modifier: 006093
modifier: 006021
modifier: 006129
modifier: 006081
modifier: 006033

912427
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HXT3 [cell envelope]

912499
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HXT9 [cell envelope]

912439
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HXT4 [cell envelope]

912475
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HXT7 [cell envelope]

005973
type: SpeciesReference
stoichiometry: 1.0
species: 896685

912487
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HXT8 [cell envelope]

913807
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: MPH3 [cell envelope]

912319
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HXT1 [cell envelope]

913795
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: MPH2 [cell envelope]

912379
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HXT15 [cell envelope]

912463
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HXT6 [cell envelope]

912391
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HXT16 [cell envelope]

911156
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: GAL2 [cell envelope]

912355
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HXT13 [cell envelope]

916286
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: STL1 [cell envelope]

005985
type: SpeciesReference
stoichiometry: 1.0
species: 896661

896661
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: D-glucose [cytoplasm]

912451
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HXT5 [cell envelope]

912343
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HXT11 [cell envelope]

905780
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: succinic semialdehyde [cytoplasm]

915857
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SEC53 [cytoplasm]

911528
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 05
name: GPI11 [endoplasmic reticulum membrane]

966290
type: Reaction
product: 966338
fast: false
modifier: meta s 2245 b r 0610
name: IPS phospholipase C
reactant: 966314
reversible: true
is: SBO:0000176
product: 966326
reactant: 966302
notes: GENE_ASSOCIATION:YER019W

966338
type: SpeciesReference
stoichiometry: 1.0
species: 902217

966314
type: SpeciesReference
stoichiometry: 1.0
species: 899745

899745
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: inositol phosphomannosylinositol phosphoceramide B (C24) [endoplasmic reticulum]

966326
type: SpeciesReference
stoichiometry: 1.0
species: 895761

966302
type: SpeciesReference
stoichiometry: 1.0
species: 899157

906056
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: thiamine(1+) [cytoplasm]

923278
type: Reaction
modifier: meta s 2563 b r 0059
notes: GENE_ASSOCIATION:YER175C
fast: false
reactant: 923290
reversible: true
is: SBO:0000176
name: 3-isopropylmalate 3-methyltransferase
reactant: 923302
product: 923326
product: 923314

916778
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TMT1 [cytoplasm]

923290
type: SpeciesReference
stoichiometry: 1.0
species: 890888

923302
type: SpeciesReference
stoichiometry: 1.0
species: 905300

923326
type: SpeciesReference
stoichiometry: 1.0
species: 905264

905264
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: S-adenosyl-L-homocysteine [cytoplasm]

923314
type: SpeciesReference
stoichiometry: 1.0
species: 893073

893073
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3-hydroxy-2-isopropyl-4-methoxy-4-oxobutanoate [cytoplasm]

904388
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: phosphatidate [mitochondrion]

964178
type: Reaction
reactant: 964190
fast: false
reversible: true
product: 964238
reactant: 964214
product: 964226
is: SBO:0000176
reactant: 964202
notes: GENE_ASSOCIATION:YDR173C
name: inositol-1,4,5-trisphosphate 3-kinase, nucleus
modifier: meta s 1905 b r 0575

964190
type: SpeciesReference
stoichiometry: 1.0
species: 892144

964238
type: SpeciesReference
stoichiometry: 1.0
species: 894861

964214
type: SpeciesReference
stoichiometry: 1.0
species: 899109

964226
type: SpeciesReference
stoichiometry: 1.0
species: 892120

892120
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: 1D-myo-inositol 1,3,4,5-tetrakisphosphate [nucleus]

964202
type: SpeciesReference
stoichiometry: 1.0
species: 895317

909356
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 16
name: BPT1 [vacuolar membrane]

895413
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: bicarbonate [mitochondrion]

962271
type: Reaction
modifier: meta s 2759 b r 0550
notes: GENE_ASSOCIATION:((YDR453C and YGR209C) or (YDR453C and YLR043C))
product: 962307
reactant: 962295
reversible: true
is: SBO:0000176
fast: false
reactant: 962283
name: hydrogen peroxide reductase (thioredoxin)
modifier: meta s 2758 b r 0550
product: 962319

919136
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TRX2:TSA2 [cytoplasm]

962307
type: SpeciesReference
stoichiometry: 2.0
species: 899145

962295
type: SpeciesReference
stoichiometry: 1.0
species: 907364

962283
type: SpeciesReference
stoichiometry: 1.0
species: 899457

919124
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TRX1:TSA2 [cytoplasm]

962319
type: SpeciesReference
stoichiometry: 1.0
species: 907412

907832
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: YHR005C, myristoylated at G2, palmitoylated at C3 [cytoplasm]

893900
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 5,10-methenyl-THF [mitochondrion]

901689
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-threonine [cytoplasm]

914503
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: PET8 [mitochondrial membrane]

011852
type: Reaction
product: 011888
reversible: true
is: SBO:0000185
modifier: meta s 2575 b r 1252
name: putrescine transport
modifier: meta s 2569 b r 1252
fast: false
product: 011900
reactant: 011864
reactant: 011876
notes: GENE_ASSOCIATION:(YLL028W or YOR273C)

011888
type: SpeciesReference
stoichiometry: 1.0
species: 899037

011900
type: SpeciesReference
stoichiometry: 1.0
species: 905012

905012
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: putrescine [vacuole]

011864
type: SpeciesReference
stoichiometry: 1.0
species: 899133

011876
type: SpeciesReference
stoichiometry: 1.0
species: 904988

902061
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: lignoceric acid [cytoplasm]

970853
type: Reaction
name: L-asparaginase
notes: GENE_ASSOCIATION:YDR321W
fast: false
product: 970892
modifier: meta s 1917 b r 0679
reactant: 970879
reversible: true
product: 970905
is: SBO:0000176
reactant: 970866

970892
type: SpeciesReference
stoichiometry: 1.0
species: 895089

908936
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ASP1 [cytoplasm]

970879
type: SpeciesReference
stoichiometry: 1.0
species: 900849

970905
type: SpeciesReference
stoichiometry: 1.0
species: 900897

970866
type: SpeciesReference
stoichiometry: 1.0
species: 899145

917946
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CBR1:CYB5:ERG11 [cytoplasm]

894260
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 6-O-phosphono-D-glucono-1,5-lactone [cytoplasm]

902781
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: myristate [peroxisome]

909920
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: DAK2 [cytoplasm]

895833
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ceramide-2' (C24) [endoplasmic reticulum]

918174
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: CYC1:DLD1 [mitochondrial membrane]

896109
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: choline [cell envelope]

940379
type: Reaction
modifier: meta s 2462 b r 0295
product: 940427
notes: GENE_ASSOCIATION:(YBR002C or YMR101C)
fast: false
reversible: true
name: cis-prenyltransferase step 15
modifier: meta s 2521 b r 0295
reactant: 940403
reactant: 940391
product: 940415
is: SBO:0000176

940427
type: SpeciesReference
stoichiometry: 1.0
species: 903620

940403
type: SpeciesReference
stoichiometry: 1.0
species: 900597

940391
type: SpeciesReference
stoichiometry: 1.0
species: 899277

899277
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: heptadecaprenyl diphosphate [lipid particle]

940415
type: SpeciesReference
stoichiometry: 1.0
species: 897393

899481
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: hydrogen peroxide [nucleus]

908120
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADE16 [cytoplasm]

012152
type: Reaction
product: 012188
is: SBO:0000185
reversible: true
fast: false
name: S-methylmethionine permease
modifier: 012212
reactant: 012164
reactant: 012176
notes: GENE_ASSOCIATION:YLL061W
product: 012200

012188
type: SpeciesReference
stoichiometry: 1.0
species: 899037

913783
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: MMP1 [cell envelope]

012164
type: SpeciesReference
stoichiometry: 1.0
species: 899061

012176
type: SpeciesReference
stoichiometry: 1.0
species: 905408

905408
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: S-methyl-L-methionine [extracellular]

012200
type: SpeciesReference
stoichiometry: 1.0
species: 905396

905396
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: S-methyl-L-methionine [cytoplasm]

890900
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (2S)-2-isopropyl-3-oxosuccinate(2-) [cytoplasm]

962847
type: Reaction
reactant: 962871
notes: GENE_ASSOCIATION:(YLR450W or YML075C)
name: hydroxymethylglutaryl CoA reductase
modifier: 962943
reactant: 962859
product: 962895
fast: false
reversible: true
reactant: 962883
product: 962907
product: 962919
is: SBO:0000176
modifier: 962931

962871
type: SpeciesReference
stoichiometry: 1.0
species: 896313

912104
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HMG2 [cytoplasm]

962859
type: SpeciesReference
stoichiometry: 1.0
species: 891118

962895
type: SpeciesReference
stoichiometry: 1.0
species: 893084

962883
type: SpeciesReference
stoichiometry: 2.0
species: 903188

962907
type: SpeciesReference
stoichiometry: 2.0
species: 899037

962919
type: SpeciesReference
stoichiometry: 2.0
species: 903236

909248
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: BNA1 [cytoplasm]

915451
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: Ras protein with CaaX motif at C terminal, a=aliphatic residue, X=any residue [endoplasmic reticulum]

906092
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: Thr-tRNA(Thr) [mitochondrion]

910088
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: DIA4 [cytoplasm]

907088
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: tRNA(Gly), cytoplasmic [cytoplasm]

899637
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: indole-3-acetate [mitochondrion]

896829
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: D-xylulose [cytoplasm]

912787
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: INP52 [cytoplasm]

919511
type: Reaction
product: 919547
name: 1,3-beta-glucan synthase
reversible: true
notes: GENE_ASSOCIATION:(YGR032W or YLR342W)
reactant: 919523
modifier: meta s 2149 b r 0005
is: SBO:0000176
modifier: meta s 2082 b r 0005
fast: false
product: 919559
product: 919535

919547
type: SpeciesReference
stoichiometry: 1.0
species: 899037

919523
type: SpeciesReference
stoichiometry: 1.0
species: 906524

911720
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GSC2 [cytoplasm]

910916
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FKS1 [cytoplasm]

919559
type: SpeciesReference
stoichiometry: 1.0
species: 906464

919535
type: SpeciesReference
stoichiometry: 1.0
species: 890815

890815
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: (1->3)-beta-D-glucan [cell envelope]

916013
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SHM2 [cytoplasm]

915511
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: RIB2 [cytoplasm]

892240
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2'-deoxyinosine [cytoplasm]

907316
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: tRNA(Tyr), cytoplasmic [cytoplasm]

933240
type: Reaction
product: 933312
name: Aminobutyraldehyde dehydrogenase
reversible: true
reactant: 933276
notes: GENE_ASSOCIATION:(YER073W or YOR374W)
modifier: 933336
reactant: 933264
fast: false
is: SBO:0000176
product: 933300
modifier: 933324
reactant: 933252
product: 933288

933312
type: SpeciesReference
stoichiometry: 1.0
species: 903164

933276
type: SpeciesReference
stoichiometry: 1.0
species: 903104

908480
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ALD5 [mitochondrion]

933264
type: SpeciesReference
stoichiometry: 1.0
species: 899193

933300
type: SpeciesReference
stoichiometry: 2.0
species: 899097

933252
type: SpeciesReference
stoichiometry: 1.0
species: 893588

893588
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 4-aminobutanal [mitochondrion]

933288
type: SpeciesReference
stoichiometry: 1.0
species: 898425

898425
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: gamma-aminobutyrate [mitochondrion]

914887
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: PLB1 [cell envelope]

919427
type: Reaction
notes: GENE_ASSOCIATION:((YEL039C and YML054C) or (YJR048W and YML054C))
fast: false
product: 919463
modifier: 919499
modifier: 919487
is: SBO:0000176
name: (S)-lactate:ferricytochrome-c 2-oxidoreductase
reversible: true
reactant: 919439
product: 919475
reactant: 919451

919463
type: SpeciesReference
stoichiometry: 2.0
species: 898221

918126
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: CYB2:CYC7 [mitochondrial membrane]

918114
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: CYB2:CYC1 [mitochondrial membrane]

919439
type: SpeciesReference
stoichiometry: 1.0
species: 891408

891408
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (S)-lactate [cytoplasm]

919475
type: SpeciesReference
stoichiometry: 1.0
species: 905108

919451
type: SpeciesReference
stoichiometry: 2.0
species: 898209

890925
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylic acid [mitochondrion]

974945
type: Reaction
reversible: true
modifier: 975017
product: 974993
reactant: 974969
notes: GENE_ASSOCIATION:YMR208W
reactant: 974957
name: mevalonate kinase (gtp)
fast: false
is: SBO:0000176
product: 974981
product: 975005

974993
type: SpeciesReference
stoichiometry: 1.0
species: 898437

974969
type: SpeciesReference
stoichiometry: 1.0
species: 898941

974957
type: SpeciesReference
stoichiometry: 1.0
species: 891118

974981
type: SpeciesReference
stoichiometry: 1.0
species: 891009

975005
type: SpeciesReference
stoichiometry: 1.0
species: 899037

976913
type: Reaction
fast: false
reversible: true
reactant: 976937
modifier: meta s 2604 b r 0765
notes: GENE_ASSOCIATION:(YEL041W or YJR049C)
reactant: 976925
name: NAD kinase
is: SBO:0000176
product: 976973
product: 976949
product: 976961
modifier: meta s 2627 b r 0765

976937
type: SpeciesReference
stoichiometry: 1.0
species: 903080

917274
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: UTR1 [cytoplasm]

976925
type: SpeciesReference
stoichiometry: 1.0
species: 895269

976973
type: SpeciesReference
stoichiometry: 1.0
species: 903188

976949
type: SpeciesReference
stoichiometry: 1.0
species: 894813

976961
type: SpeciesReference
stoichiometry: 1.0
species: 899037

917550
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: YEF1 [cytoplasm]

986211
type: Reaction
is: SBO:0000176
reactant: 986235
name: phospholipase D
product: 986259
reactant: 986223
notes: GENE_ASSOCIATION:YKR031C
product: 986247
fast: false
reversible: true
modifier: meta s 2519 b r 0899

986235
type: SpeciesReference
stoichiometry: 1.0
species: 904508

904508
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: phosphatidylcholine [cell envelope]

986259
type: SpeciesReference
stoichiometry: 1.0
species: 904340

986223
type: SpeciesReference
stoichiometry: 1.0
species: 899145

986247
type: SpeciesReference
stoichiometry: 1.0
species: 896109

916208
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: SPO14 [cell envelope]

892374
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-dehydropantoate [cytoplasm]

996550
type: Reaction
reactant: 996574
notes: GENE_ASSOCIATION:(YAL044C and YBR221C and YDR019C and YER178W and YMR189W)
fast: false
product: 996586
reactant: 996562
reversible: true
is: SBO:0000176
modifier: 996610
name: tetrahydrofolate aminomethyltransferase
product: 996598

996574
type: SpeciesReference
stoichiometry: 1.0
species: 899193

996586
type: SpeciesReference
stoichiometry: 1.0
species: 894092

894092
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 5-formyltetrahydrofolic acid [mitochondrion]

996562
type: SpeciesReference
stoichiometry: 1.0
species: 893900

996598
type: SpeciesReference
stoichiometry: 1.0
species: 899097

961455
type: Reaction
is: SBO:0000176
modifier: meta s 2194 b r 0539
name: Histidyl-tRNA synthetase
reactant: 961491
fast: false
reactant: 961479
product: 961503
product: 961527
reversible: true
notes: GENE_ASSOCIATION:YPR033C
product: 961515
reactant: 961467

912259
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HTS1 [cytoplasm]

961491
type: SpeciesReference
stoichiometry: 1.0
species: 907100

907100
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: tRNA(His), cytoplasmic [cytoplasm]

961479
type: SpeciesReference
stoichiometry: 1.0
species: 901257

961503
type: SpeciesReference
stoichiometry: 1.0
species: 895137

961527
type: SpeciesReference
stoichiometry: 1.0
species: 899397

899397
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: His-tRNA(His) [cytoplasm]

961515
type: SpeciesReference
stoichiometry: 1.0
species: 897369

961467
type: SpeciesReference
stoichiometry: 1.0
species: 895269

976829
type: Reaction
notes: GENE_ASSOCIATION:YGL067W
reactant: 976841
fast: false
product: 976877
is: SBO:0000176
product: 976889
reactant: 976853
reversible: true
product: 976865
modifier: 976901
name: NAD diphosphatase

976841
type: SpeciesReference
stoichiometry: 1.0
species: 899217

976877
type: SpeciesReference
stoichiometry: 2.0
species: 899121

976889
type: SpeciesReference
stoichiometry: 1.0
species: 903404

903404
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: NMN [peroxisome]

976853
type: SpeciesReference
stoichiometry: 1.0
species: 903128

976865
type: SpeciesReference
stoichiometry: 1.0
species: 895173

914155
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: NPY1 [peroxisome]

930442
type: Reaction
product: 930478
is: SBO:0000176
fast: false
reactant: 930454
modifier: meta s 1858 b r 0163
name: alcohol dehydrogenase (ethanol)
product: 930502
reversible: true
modifier: 930514
reactant: 930466
product: 930490
modifier: meta s 1857 b r 0163
modifier: meta s 1861 b r 0163
notes: GENE_ASSOCIATION:(YBR145W or YDL168W or YGL256W or YMR303C or YOL086C)
modifier: meta s 1860 b r 0163

930478
type: SpeciesReference
stoichiometry: 1.0
species: 894464

930454
type: SpeciesReference
stoichiometry: 1.0
species: 897885

897885
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ethanol [cytoplasm]

930502
type: SpeciesReference
stoichiometry: 1.0
species: 903140

930466
type: SpeciesReference
stoichiometry: 1.0
species: 903080

930490
type: SpeciesReference
stoichiometry: 1.0
species: 899037

891396
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (S)-lactaldehyde [cytoplasm]

908204
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADE8 [cytoplasm]

898401
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: gamma-aminobutyrate [cytoplasm]

959439
type: Reaction
reactant: 959451
product: 959511
notes: GENE_ASSOCIATION:(YBR121C or YPR081C)
fast: false
product: 959487
reactant: 959463
modifier: meta s 2144 b r 0512
modifier: meta s 2145 b r 0512
reactant: 959475
name: glycyl-tRNA synthetase
reversible: true
is: SBO:0000176
product: 959499

959451
type: SpeciesReference
stoichiometry: 1.0
species: 895269

959511
type: SpeciesReference
stoichiometry: 1.0
species: 898641

898641
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: Gly-tRNA(Gly) [cytoplasm]

959487
type: SpeciesReference
stoichiometry: 1.0
species: 895137

959463
type: SpeciesReference
stoichiometry: 1.0
species: 901221

911660
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GRS1 [cytoplasm]

911672
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GRS2 [cytoplasm]

959475
type: SpeciesReference
stoichiometry: 1.0
species: 907088

959499
type: SpeciesReference
stoichiometry: 1.0
species: 897369

905816
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: sulphate [cytoplasm]

911432
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GND1 [cytoplasm]

012296
type: Reaction
modifier: meta s 2576 b r 1259
product: 012320
reactant: 012308
notes: GENE_ASSOCIATION:YKL174C
is: SBO:0000185
fast: false
reversible: true
name: spermidine excretion

916937
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: TPO5 [cell envelope]

012320
type: SpeciesReference
stoichiometry: 1.0
species: 905576

905576
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: spermidine [extracellular]

012308
type: SpeciesReference
stoichiometry: 1.0
species: 905564

905564
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: spermidine [cytoplasm]

917478
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: YAT2 [cytoplasm]

895005
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: alpha-D-glucosamine 1-phosphate [cytoplasm]

898785
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: glycerol 3-phosphate [lipid particle]

895689
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ceramide-1 (C24) [endoplasmic reticulum]

949504
type: Reaction
modifier: 949588
product: 949564
reactant: 949540
reversible: true
product: 949576
name: fatty-acid--CoA ligase (decanoate)
product: 949552
reactant: 949528
fast: false
notes: GENE_ASSOCIATION:YER015W
reactant: 949516
is: SBO:0000176

949564
type: SpeciesReference
stoichiometry: 1.0
species: 897045

949540
type: SpeciesReference
stoichiometry: 1.0
species: 897009

897009
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: decanoate [peroxisome]

949576
type: SpeciesReference
stoichiometry: 1.0
species: 897429

949552
type: SpeciesReference
stoichiometry: 1.0
species: 895173

949528
type: SpeciesReference
stoichiometry: 1.0
species: 896373

949516
type: SpeciesReference
stoichiometry: 1.0
species: 895329

918198
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: CYC1:DLD3 [mitochondrial membrane]

917790
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ZWF1 [cytoplasm]

914779
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: PHO90 [cell envelope]

001901
type: Reaction
modifier: meta s 1867 b r 1106
product: 001925
reactant: 001913
notes: GENE_ASSOCIATION:YCR010C
is: SBO:0000185
fast: false
reversible: true
name: acetate transport

908336
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: ADY2 [cell envelope]

001925
type: SpeciesReference
stoichiometry: 1.0
species: 894488

001913
type: SpeciesReference
stoichiometry: 1.0
species: 894512

894512
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: acetate [extracellular]

903368
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: nicotinic acid D-ribonucleotide [mitochondrion]

908144
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADE2 [cytoplasm]

895917
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: ceramide-3 (C24) [Golgi]

915948
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SES1 [cytoplasm]

912128
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: HNM1 [cell envelope]

891818
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate [mitochondrion]

meta r 0070
type: Reaction
is: SBO:0000176
reversible: true
reactant: 923999
product: 924035
reactant: 923987
notes: GENE_ASSOCIATION:
name: 4-hydroxybenzoate formation
product: 924011
is described by: http://identifiers.org/pubmed/11583838
product: 924023
fast: false

923999
type: SpeciesReference
stoichiometry: 1.0
species: 899193

924035
type: SpeciesReference
stoichiometry: 1.0
species: 899097

923987
type: SpeciesReference
stoichiometry: 1.0
species: 893720

893720
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 4-hydroxybenzoyl-CoA [mitochondrion]

924011
type: SpeciesReference
stoichiometry: 1.0
species: 893708

893708
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 4-hydroxybenzoate [mitochondrion]

924023
type: SpeciesReference
stoichiometry: 1.0
species: 896349

011972
type: Reaction
product: 012020
reversible: true
reactant: 011996
reactant: 011984
name: pyruvate transport
fast: false
product: 012008
is: SBO:0000185
modifier: 012032
notes: GENE_ASSOCIATION:YKL217W

012020
type: SpeciesReference
stoichiometry: 1.0
species: 905108

011996
type: SpeciesReference
stoichiometry: 1.0
species: 905120

905120
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: pyruvate [extracellular]

011984
type: SpeciesReference
stoichiometry: 1.0
species: 899061

012008
type: SpeciesReference
stoichiometry: 1.0
species: 899037

912943
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: JEN1 [cell envelope]

979792
type: Reaction
fast: false
reactant: 979816
reactant: 979804
name: nucleoside diphosphate kinase
reversible: true
modifier: 979852
is: SBO:0000176
product: 979840
notes: GENE_ASSOCIATION:YKL067W
product: 979828

979816
type: SpeciesReference
stoichiometry: 1.0
species: 897573

979804
type: SpeciesReference
stoichiometry: 1.0
species: 895269

979840
type: SpeciesReference
stoichiometry: 1.0
species: 897621

979828
type: SpeciesReference
stoichiometry: 1.0
species: 894813

954724
type: Reaction
product: 954748
modifier: meta s 2070 b r 0450
name: fructose-bisphosphate aldolase
fast: false
product: 954760
is: SBO:0000176
reversible: true
notes: GENE_ASSOCIATION:YKL060C
reactant: 954736

954748
type: SpeciesReference
stoichiometry: 1.0
species: 897321

897321
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dihydroxyacetone phosphate [cytoplasm]

910772
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FBA1 [cytoplasm]

954760
type: SpeciesReference
stoichiometry: 1.0
species: 898725

898725
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: glyceraldehyde 3-phosphate [cytoplasm]

954736
type: SpeciesReference
stoichiometry: 1.0
species: 896577

000749
type: Reaction
reactant: 000761
fast: false
modifier: meta s 1935 b r 1088
name: valine transaminase, mitochondiral
reversible: true
product: 000785
notes: GENE_ASSOCIATION:YHR208W
is: SBO:0000176
product: 000797
reactant: 000773

000761
type: SpeciesReference
stoichiometry: 1.0
species: 892701

000785
type: SpeciesReference
stoichiometry: 1.0
species: 893228

893228
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 3-methyl-2-oxobutanoate [mitochondrion]

000797
type: SpeciesReference
stoichiometry: 1.0
species: 901125

000773
type: SpeciesReference
stoichiometry: 1.0
species: 901845

901845
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: L-valine [mitochondrion]

937823
type: Reaction
reactant: 937871
reversible: true
modifier: meta s 2532 b r 0259
is: SBO:0000176
product: 937907
name: ceramide-1 hydroxylase (24C)
fast: false
product: 937895
product: 937883
reactant: 937835
reactant: 937847
reactant: 937859
notes: GENE_ASSOCIATION:YDR297W

937871
type: SpeciesReference
stoichiometry: 1.0
species: 903860

937907
type: SpeciesReference
stoichiometry: 1.0
species: 903200

937895
type: SpeciesReference
stoichiometry: 1.0
species: 899157

937883
type: SpeciesReference
stoichiometry: 1.0
species: 895761

937835
type: SpeciesReference
stoichiometry: 1.0
species: 895689

937847
type: SpeciesReference
stoichiometry: 1.0
species: 899049

937859
type: SpeciesReference
stoichiometry: 1.0
species: 903248

901713
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: L-threonine [mitochondrion]

891830
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate [vacuole]

913351
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: LYS20 [nucleus]

946323
type: Reaction
reactant: 946401
product: 946466
fast: false
product: 946414
reactant: 946336
product: 946453
reactant: 946362
modifier: meta s 2685 b r 0375
modifier: meta s 2692 b r 0375
modifier: meta s 2687 b r 0375
reactant: 946349
product: 946440
product: 946427
reactant: 946388
name: fatty acid oxidation
reversible: true
notes: GENE_ASSOCIATION:((YGL205W and YIL160C and YKR009C and YLR284C and YNL202W) or (YGL205W and YIL160C and YKR009C and YLR284C and YNL202W and YOR180C) or (YGL205W and YIL160C and YKR009C and YNL202W and YOR180C))
is: SBO:0000176
reactant: 946375

946401
type: SpeciesReference
stoichiometry: 7.0
species: 903884

946466
type: SpeciesReference
stoichiometry: 1.0
species: 903224

946414
type: SpeciesReference
stoichiometry: 8.0
species: 894633

946336
type: SpeciesReference
stoichiometry: 7.0
species: 896373

946453
type: SpeciesReference
stoichiometry: 7.0
species: 903176

946362
type: SpeciesReference
stoichiometry: 1.0
species: 899337

899337
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: hexadec-2-enoyl-CoA [peroxisome]

918246
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: DCI1:ECI1:FOX2:POT1:POX1:SPS19 [peroxisome]

918331
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: ECI1:FOX2:POT1:POX1:SPS19 [peroxisome]

918270
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: DCI1:FOX2:POT1:POX1:SPS19 [peroxisome]

946349
type: SpeciesReference
stoichiometry: 7.0
species: 899217

946440
type: SpeciesReference
stoichiometry: 7.0
species: 899493

946427
type: SpeciesReference
stoichiometry: 6.0
species: 899121

946388
type: SpeciesReference
stoichiometry: 1.0
species: 903272

946375
type: SpeciesReference
stoichiometry: 7.0
species: 903128

913735
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: MIR1 [mitochondrial membrane]

932796
type: Reaction
is: SBO:0000176
product: 932832
modifier: meta s 2357 b r 0194
modifier: meta s 2356 b r 0194
reactant: 932820
name: alpha,alpha-trehalase
reactant: 932808
notes: GENE_ASSOCIATION:(YDR001C or YBR001C)
fast: false
reversible: true

932832
type: SpeciesReference
stoichiometry: 2.0
species: 896661

914215
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: NTH2 [cytoplasm]

914203
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: NTH1 [cytoplasm]

932820
type: SpeciesReference
stoichiometry: 1.0
species: 906284

906284
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: trehalose [cytoplasm]

932808
type: SpeciesReference
stoichiometry: 1.0
species: 899145

907508
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: acetylated protein with terminal(Met-Glu) [cytoplasm]

972772
type: Reaction
reversible: true
reactant: 972796
is: SBO:0000176
reactant: 972784
notes: GENE_ASSOCIATION:YNL045W
product: 972808
fast: false
modifier: meta s 2266 b r 0708
name: leukotriene A4 hydrolase

972796
type: SpeciesReference
stoichiometry: 1.0
species: 902025

902025
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: leukotriene A4 [nucleus]

972784
type: SpeciesReference
stoichiometry: 1.0
species: 899205

972808
type: SpeciesReference
stoichiometry: 1.0
species: 902049

902049
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: leukotriene B4 [nucleus]

904712
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: phospholipid [cytoplasm]

892941
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: 3-(4-hydroxyphenyl)pyruvate [peroxisome]

895809
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: ceramide-2 (C26) [Golgi]

900765
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-alpha-formylglycine [cytoplasm]

975353
type: Reaction
reversible: true
reactant: 975377
product: 975413
notes: GENE_ASSOCIATION:YBR159W
modifier: meta s 2223 b r 0742
is: SBO:0000176
reactant: 975365
reactant: 975389
name: microsomal beta-keto-reductase
product: 975401
fast: false

975377
type: SpeciesReference
stoichiometry: 1.0
species: 899049

975413
type: SpeciesReference
stoichiometry: 1.0
species: 903200

975365
type: SpeciesReference
stoichiometry: 1.0
species: 893384

893384
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 3-oxotetracosanoyl-CoA [endoplasmic reticulum]

975389
type: SpeciesReference
stoichiometry: 1.0
species: 903248

975401
type: SpeciesReference
stoichiometry: 1.0
species: 893192

893192
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 3-hydroxytetracosanoyl-CoA [endoplasmic reticulum]

939575
type: Reaction
product: 939623
modifier: meta s 2521 b r 0282
product: 939635
product: 939611
is: SBO:0000176
reversible: true
notes: GENE_ASSOCIATION:(YBR002C or YMR101C)
modifier: meta s 2462 b r 0282
reactant: 939587
name: cis-prenyltransferase step 02
fast: false
reactant: 939599

939623
type: SpeciesReference
stoichiometry: 3.0
species: 899085

899085
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: H+ [lipid particle]

939635
type: SpeciesReference
stoichiometry: 1.0
species: 904148

904148
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: pentaprenyl diphosphate [lipid particle]

939611
type: SpeciesReference
stoichiometry: 1.0
species: 897393

939587
type: SpeciesReference
stoichiometry: 1.0
species: 898521

898521
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: geranylgeranyl diphosphate [lipid particle]

939599
type: SpeciesReference
stoichiometry: 1.0
species: 900597

966890
type: Reaction
modifier: meta s 2246 b r 0620
name: IPS phospholipase C
product: 966926
product: 966938
reversible: true
reactant: 966914
fast: false
reactant: 966902
is: SBO:0000176
notes: GENE_ASSOCIATION:YER019W

966926
type: SpeciesReference
stoichiometry: 1.0
species: 892180

966938
type: SpeciesReference
stoichiometry: 1.0
species: 895785

966914
type: SpeciesReference
stoichiometry: 1.0
species: 900129

900129
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: inositol-P-ceramide B (C24) [mitochondrion]

966902
type: SpeciesReference
stoichiometry: 1.0
species: 899193

004721
type: Reaction
notes: GENE_ASSOCIATION:(YIL013C or YOR011W)
modifier: meta s 1928 b r 1147
is: SBO:0000185
modifier: meta s 2379 b r 1147
product: 004745
name: ergosterol transport
reactant: 004733
fast: false
reversible: true

004745
type: SpeciesReference
stoichiometry: 1.0
species: 897741

897741
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ergosterol [cytoplasm]

004733
type: SpeciesReference
stoichiometry: 1.0
species: 897765

897765
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: ergosterol [extracellular]

908180
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADE5,7 [cytoplasm]

909872
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CYR1 [cytoplasm]

980824
type: Reaction
is: SBO:0000176
product: 980872
product: 980860
name: ornithine decarboxylase
reversible: true
reactant: 980848
notes: GENE_ASSOCIATION:YKL184W
fast: false
modifier: 980884
reactant: 980836

980872
type: SpeciesReference
stoichiometry: 1.0
species: 904988

980860
type: SpeciesReference
stoichiometry: 1.0
species: 895485

980848
type: SpeciesReference
stoichiometry: 1.0
species: 903752

980836
type: SpeciesReference
stoichiometry: 1.0
species: 899037

961851
type: Reaction
notes: GENE_ASSOCIATION:(YLL062C or YPL273W)
product: 961911
name: homocysteine S-methyltransferase
product: 961899
reactant: 961875
is: SBO:0000176
reactant: 961863
modifier: meta s 2488 b r 0544
fast: false
product: 961887
reversible: true
modifier: meta s 2316 b r 0544

961911
type: SpeciesReference
stoichiometry: 1.0
species: 905264

961899
type: SpeciesReference
stoichiometry: 1.0
species: 901509

961875
type: SpeciesReference
stoichiometry: 1.0
species: 905300

961863
type: SpeciesReference
stoichiometry: 1.0
species: 901329

901329
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-homocysteine [cytoplasm]

915805
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SAM4 [cytoplasm]

961887
type: SpeciesReference
stoichiometry: 1.0
species: 899037

913039
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: KTR1 [Golgi]

944662
type: Reaction
product: 944698
name: dihydropteroate synthase
product: 944710
modifier: 944722
fast: false
notes: GENE_ASSOCIATION:YNL256W
is: SBO:0000176
reactant: 944686
reversible: true
reactant: 944674

944698
type: SpeciesReference
stoichiometry: 1.0
species: 894392

944710
type: SpeciesReference
stoichiometry: 1.0
species: 897405

944686
type: SpeciesReference
stoichiometry: 1.0
species: 893564

944674
type: SpeciesReference
stoichiometry: 1.0
species: 890851

890851
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: (2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl trihydrogen diphosphate [mitochondrion]

916715
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: THR4 [cytoplasm]

007544
type: Reaction
modifier: 007616
reactant: 007568
fast: false
notes: GENE_ASSOCIATION:(YFL055W or YKR039W or YPL265W)
name: L-aspartate transport
modifier: 007604
product: 007580
reversible: true
modifier: 007628
is: SBO:0000185
product: 007592
reactant: 007556

910124
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: DIP5 [cell envelope]

007568
type: SpeciesReference
stoichiometry: 1.0
species: 900909

908384
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: AGP3 [cell envelope]

007580
type: SpeciesReference
stoichiometry: 1.0
species: 899037

007592
type: SpeciesReference
stoichiometry: 1.0
species: 900897

007556
type: SpeciesReference
stoichiometry: 1.0
species: 899061

000233
type: Reaction
is: SBO:0000176
reversible: true
fast: false
reactant: 000257
notes: GENE_ASSOCIATION:YDR047W
name: uroporphyrinogen decarboxylase (uroporphyrinogen III)
product: 000269
product: 000281
modifier: 000293
reactant: 000245

000257
type: SpeciesReference
stoichiometry: 1.0
species: 906704

906704
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: uroporphyrinogen III [cytoplasm]

000269
type: SpeciesReference
stoichiometry: 4.0
species: 895485

000281
type: SpeciesReference
stoichiometry: 1.0
species: 896385

896385
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: coproporphyrinogen III [cytoplasm]

911876
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HEM12 [cytoplasm]

000245
type: SpeciesReference
stoichiometry: 4.0
species: 899037

898485
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GDP-alpha-D-mannose [cytoplasm]

966830
type: Reaction
reversible: true
name: IPS phospholipase C
modifier: meta s 2246 b r 0619
reactant: 966842
is: SBO:0000176
product: 966866
reactant: 966854
fast: false
notes: GENE_ASSOCIATION:YER019W
product: 966878

966842
type: SpeciesReference
stoichiometry: 1.0
species: 899193

966866
type: SpeciesReference
stoichiometry: 1.0
species: 892180

966854
type: SpeciesReference
stoichiometry: 1.0
species: 900237

966878
type: SpeciesReference
stoichiometry: 1.0
species: 895893

895893
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ceramide-2' (C26) [mitochondrion]

964550
type: Reaction
name: inositolphosphotransferase
fast: false
reactant: 964574
is: SBO:0000176
reactant: 964562
product: 964598
modifier: meta s 2244 b r 0581
notes: GENE_ASSOCIATION:YDR072C
product: 964586
reversible: true

964574
type: SpeciesReference
stoichiometry: 1.0
species: 902385

902385
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: mannosylinositol phosphorylceramide B (C26) [Golgi]

964562
type: SpeciesReference
stoichiometry: 1.0
species: 891733

964598
type: SpeciesReference
stoichiometry: 1.0
species: 899793

899793
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: inositol phosphomannosylinositol phosphoceramide B (C26) [Golgi]

964586
type: SpeciesReference
stoichiometry: 1.0
species: 897225

915127
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PRO3 [cytoplasm]

890730
type: SBMLUnit
exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND

890718
type: SBMLUnit
exponent: 1.0
scale: 0
multipler: 1.0
kind: MOLE

891914
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [cytoplasm]

003245
type: Reaction
notes: GENE_ASSOCIATION:YBR291C
product: 003281
name: citrate transport
reactant: 003269
reactant: 003257
is: SBO:0000185
reversible: true
product: 003293
modifier: 003305
fast: false

003281
type: SpeciesReference
stoichiometry: 1.0
species: 896253

003269
type: SpeciesReference
stoichiometry: 1.0
species: 900561

003257
type: SpeciesReference
stoichiometry: 1.0
species: 896241

003293
type: SpeciesReference
stoichiometry: 1.0
species: 900549

909848
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: CTP1 [mitochondrial membrane]

947033
type: Reaction
product: 947165
modifier: meta s 2687 b r 0380
is: SBO:0000176
reversible: true
reactant: 947105
modifier: meta s 2692 b r 0380
reactant: 947069
fast: false
product: 947153
product: 947129
product: 947117
notes: GENE_ASSOCIATION:((YGL205W and YIL160C and YKR009C and YLR284C and YNL202W) or (YGL205W and YIL160C and YKR009C and YNL202W and YOR180C))
name: fatty acid oxidation
reactant: 947093
reactant: 947081
product: 947141
reactant: 947057
reactant: 947045

947165
type: SpeciesReference
stoichiometry: 1.0
species: 903224

947105
type: SpeciesReference
stoichiometry: 7.0
species: 903884

947069
type: SpeciesReference
stoichiometry: 8.0
species: 903128

947153
type: SpeciesReference
stoichiometry: 8.0
species: 903176

947129
type: SpeciesReference
stoichiometry: 7.0
species: 899121

947117
type: SpeciesReference
stoichiometry: 9.0
species: 894633

947093
type: SpeciesReference
stoichiometry: 1.0
species: 903608

903608
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: octadec-9-ynoyl-CoA [peroxisome]

947081
type: SpeciesReference
stoichiometry: 1.0
species: 903272

947141
type: SpeciesReference
stoichiometry: 7.0
species: 899493

947057
type: SpeciesReference
stoichiometry: 8.0
species: 899217

947045
type: SpeciesReference
stoichiometry: 8.0
species: 896373

917045
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TYR1 [cytoplasm]

891384
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (S)-dihydroorotate [cytoplasm]

896625
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: D-galactose [extracellular]

917382
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: VIP1 [cytoplasm]

957063
type: Reaction
is: SBO:0000176
reversible: true
reactant: 957099
modifier: meta s 2712 b r 0482
notes: GENE_ASSOCIATION:(YPL059W and YPL091W)
fast: false
product: 957123
reactant: 957087
reactant: 957075
product: 957111
name: glutathione oxidoreductase

957099
type: SpeciesReference
stoichiometry: 1.0
species: 903260

918571
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: GLR1:GRX5 [mitochondrion]

957123
type: SpeciesReference
stoichiometry: 1.0
species: 903212

957087
type: SpeciesReference
stoichiometry: 1.0
species: 899097

957075
type: SpeciesReference
stoichiometry: 1.0
species: 898629

957111
type: SpeciesReference
stoichiometry: 2.0
species: 898593

930058
type: Reaction
reactant: 930082
reactant: 930094
modifier: meta s 1875 b r 0157
reversible: true
product: 930106
product: 930130
product: 930118
notes: GENE_ASSOCIATION:YOR335C
name: alanyl-tRNA synthetase
is: SBO:0000176
reactant: 930070
fast: false

930082
type: SpeciesReference
stoichiometry: 1.0
species: 900705

900705
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-alanine [cytoplasm]

930094
type: SpeciesReference
stoichiometry: 1.0
species: 906956

906956
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: tRNA(Ala), cytoplasmic [cytoplasm]

908432
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ALA1 [cytoplasm]

930106
type: SpeciesReference
stoichiometry: 1.0
species: 894921

894921
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: Ala-tRNA(Ala) [cytoplasm]

930130
type: SpeciesReference
stoichiometry: 1.0
species: 897369

930118
type: SpeciesReference
stoichiometry: 1.0
species: 895137

930070
type: SpeciesReference
stoichiometry: 1.0
species: 895269

949816
type: Reaction
reactant: 949840
product: 949864
reactant: 949852
product: 949876
is: SBO:0000176
modifier: 949900
product: 949888
notes: GENE_ASSOCIATION:YER015W
reactant: 949828
name: fatty-acid--CoA ligase (hexadecanoate)
reversible: true
fast: false

949840
type: SpeciesReference
stoichiometry: 1.0
species: 896373

949864
type: SpeciesReference
stoichiometry: 1.0
species: 895173

949852
type: SpeciesReference
stoichiometry: 1.0
species: 903968

903968
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: palmitate [peroxisome]

949876
type: SpeciesReference
stoichiometry: 1.0
species: 897429

949888
type: SpeciesReference
stoichiometry: 1.0
species: 904064

904064
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: palmitoyl-CoA [peroxisome]

949828
type: SpeciesReference
stoichiometry: 1.0
species: 895329

893612
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 4-diphospho-1D-myo-inositol pentakisphosphate [cytoplasm]

915766
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SAM1 [cytoplasm]

938279
type: Reaction
reversible: true
reactant: 938291
is: SBO:0000176
product: 938339
modifier: meta s 2718 b r 0264
reactant: 938303
name: ceramide-1 synthase (26C)
notes: GENE_ASSOCIATION:((YHL003C and YMR298W) or (YKL008C and YMR298W))
fast: false
modifier: meta s 2719 b r 0264
product: 938327
product: 938315

938291
type: SpeciesReference
stoichiometry: 1.0
species: 899301

899301
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: hexacosanoyl-CoA [endoplasmic reticulum]

938339
type: SpeciesReference
stoichiometry: 1.0
species: 899049

918643
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: LAC1:LIP1 [endoplasmic reticulum]

938303
type: SpeciesReference
stoichiometry: 1.0
species: 905636

938327
type: SpeciesReference
stoichiometry: 1.0
species: 896325

938315
type: SpeciesReference
stoichiometry: 1.0
species: 895725

895725
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ceramide-1 (C26) [endoplasmic reticulum]

907904
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: AAT2 [peroxisome]

930886
type: Reaction
reversible: true
product: 930946
modifier: meta s 1857 b r 0169
modifier: meta s 1858 b r 0169
modifier: meta s 1861 b r 0169
modifier: meta s 1860 b r 0169
fast: false
product: 930934
notes: GENE_ASSOCIATION:(YBR145W or YDL168W or YGL256W or YMR303C or YOL086C)
reactant: 930922
is: SBO:0000176
name: aldehyde dehydrogenase (2-phenylethanol, NAD)
modifier: meta s 2500 b r 0169
reactant: 930910
reactant: 930898

930946
type: SpeciesReference
stoichiometry: 1.0
species: 903080

930934
type: SpeciesReference
stoichiometry: 1.0
species: 892737

892737
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-phenylethanol [cytoplasm]

930922
type: SpeciesReference
stoichiometry: 1.0
species: 904220

904220
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: phenylacetaldehyde [cytoplasm]

930910
type: SpeciesReference
stoichiometry: 1.0
species: 903140

930898
type: SpeciesReference
stoichiometry: 1.0
species: 899037

962067
type: Reaction
reactant: 962103
reversible: true
fast: false
name: homoserine dehydrogenase (NADP)
modifier: meta s 2187 b r 0547
notes: GENE_ASSOCIATION:YJR139C
product: 962127
reactant: 962091
product: 962115
is: SBO:0000176
reactant: 962079

962103
type: SpeciesReference
stoichiometry: 1.0
species: 903236

912176
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HOM6 [cytoplasm]

962127
type: SpeciesReference
stoichiometry: 1.0
species: 903188

962091
type: SpeciesReference
stoichiometry: 1.0
species: 900957

962115
type: SpeciesReference
stoichiometry: 1.0
species: 901341

901341
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-homoserine [cytoplasm]

962079
type: SpeciesReference
stoichiometry: 1.0
species: 899037

901737
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: L-tryptophan [extracellular]

916000
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: SHM1 [mitochondrion]

913759
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MLS1 [cytoplasm]

908132
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADE17 [cytoplasm]

903992
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: palmitoleate [peroxisome]

950680
type: Reaction
reversible: true
product: 950752
fast: false
reactant: 950692
product: 950740
notes: GENE_ASSOCIATION:YER015W
is: SBO:0000176
reactant: 950716
product: 950728
name: fatty-acid--CoA ligase (octanoate)
reactant: 950704
modifier: 950764

950752
type: SpeciesReference
stoichiometry: 1.0
species: 903680

903680
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: octanoyl-CoA [peroxisome]

950692
type: SpeciesReference
stoichiometry: 1.0
species: 895329

950740
type: SpeciesReference
stoichiometry: 1.0
species: 897429

950716
type: SpeciesReference
stoichiometry: 1.0
species: 903644

903644
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: octanoate [peroxisome]

950728
type: SpeciesReference
stoichiometry: 1.0
species: 895173

950704
type: SpeciesReference
stoichiometry: 1.0
species: 896373

013303
type: Reaction
reactant: 013315
fast: false
name: UTP/UMP antiport
reactant: 013339
modifier: meta s 2470 b r 1276
notes: GENE_ASSOCIATION:YBR192W
product: 013363
product: 013351
is: SBO:0000185
reactant: 013327
product: 013375
reversible: true

013315
type: SpeciesReference
stoichiometry: 2.0
species: 899037

013339
type: SpeciesReference
stoichiometry: 1.0
species: 906716

013363
type: SpeciesReference
stoichiometry: 1.0
species: 906548

013351
type: SpeciesReference
stoichiometry: 2.0
species: 899097

013327
type: SpeciesReference
stoichiometry: 1.0
species: 906572

906572
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: UMP [mitochondrion]

013375
type: SpeciesReference
stoichiometry: 1.0
species: 906728

906728
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: UTP [mitochondrion]

911108
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: FUR4 [cell envelope]

914803
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: PHS1 [endoplasmic reticulum]

905444
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: Ser-tRNA(Ser) [cytoplasm]

894584
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: acetyl-ACP [mitochondrion]

891805
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate [endoplasmic reticulum]

911060
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FUM1 [cytoplasm]

893468
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 4,4-dimethyl-5alpha-cholesta-8,14,24-trien-3beta-ol [cytoplasm]

983895
type: Reaction
reversible: true
reactant: 983907
notes: GENE_ASSOCIATION:YOL065C
modifier: meta s 2241 b r 0865
is: SBO:0000176
reactant: 983919
name: phosphatidylinositol 4,5-bisphosphate 5-phosphatase
product: 983943
fast: false
product: 983931
product: 983955

983907
type: SpeciesReference
stoichiometry: 1.0
species: 891926

891926
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [endoplasmic reticulum]

983919
type: SpeciesReference
stoichiometry: 1.0
species: 899157

983943
type: SpeciesReference
stoichiometry: 2.0
species: 899049

983931
type: SpeciesReference
stoichiometry: 1.0
species: 891974

891974
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 1-phosphatidyl-1D-myo-inositol 4-phosphate [endoplasmic reticulum]

983955
type: SpeciesReference
stoichiometry: 1.0
species: 904268

970542
type: Reaction
product: 970594
is: SBO:0000176
product: 970607
fast: false
reactant: 970555
name: L-allo-threonine dehydrogenase
modifier: meta s 2639 b r 0676
notes: GENE_ASSOCIATION:YMR226C
reversible: true
reactant: 970568
product: 970581

970594
type: SpeciesReference
stoichiometry: 1.0
species: 900669

900669
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-2-amino-3-oxobutanoate [cytoplasm]

970607
type: SpeciesReference
stoichiometry: 1.0
species: 903236

970555
type: SpeciesReference
stoichiometry: 1.0
species: 900741

900741
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-allothreonine [cytoplasm]

917694
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: YMR226C [cytoplasm]

970568
type: SpeciesReference
stoichiometry: 1.0
species: 903188

970581
type: SpeciesReference
stoichiometry: 1.0
species: 899037

935208
type: Reaction
reactant: 935232
notes: GENE_ASSOCIATION:YER055C
is: SBO:0000176
name: ATP phosphoribosyltransferase
product: 935244
reactant: 935220
fast: false
product: 935256
reversible: true
modifier: 935268

935232
type: SpeciesReference
stoichiometry: 1.0
species: 904952

935244
type: SpeciesReference
stoichiometry: 1.0
species: 894152

894152
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5-phosphoribosyl-ATP [cytoplasm]

935220
type: SpeciesReference
stoichiometry: 1.0
species: 895269

935256
type: SpeciesReference
stoichiometry: 1.0
species: 897369

912008
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HIS1 [cytoplasm]

915523
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: RIB3 [cytoplasm]

960243
type: Reaction
fast: false
name: GTP cyclohydrolase I
modifier: 960315
reversible: true
product: 960303
reactant: 960255
notes: GENE_ASSOCIATION:YGR267C
is: SBO:0000176
product: 960291
product: 960279
reactant: 960267

911000
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FOL2 [cytoplasm]

960303
type: SpeciesReference
stoichiometry: 1.0
species: 899037

960255
type: SpeciesReference
stoichiometry: 1.0
species: 898941

960291
type: SpeciesReference
stoichiometry: 1.0
species: 898353

960279
type: SpeciesReference
stoichiometry: 1.0
species: 894368

894368
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 7,8-dihydroneopterin 3'-triphosphate [cytoplasm]

960267
type: SpeciesReference
stoichiometry: 1.0
species: 899145

939839
type: Reaction
modifier: meta s 2521 b r 0286
reactant: 939863
is: SBO:0000176
name: cis-prenyltransferase step 06
product: 939887
fast: false
modifier: meta s 2462 b r 0286
notes: GENE_ASSOCIATION:(YBR002C or YMR101C)
reversible: true
product: 939875
reactant: 939851

939863
type: SpeciesReference
stoichiometry: 1.0
species: 903692

939887
type: SpeciesReference
stoichiometry: 1.0
species: 903452

939875
type: SpeciesReference
stoichiometry: 1.0
species: 897393

939851
type: SpeciesReference
stoichiometry: 1.0
species: 900597

903296
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: nicotinamide [nucleus]

972304
type: Reaction
notes: GENE_ASSOCIATION:YHR208W
product: 972340
is: SBO:0000176
reactant: 972328
modifier: meta s 1935 b r 0700
fast: false
reactant: 972316
name: leucine transaminase
product: 972352
reversible: true

972340
type: SpeciesReference
stoichiometry: 1.0
species: 893744

972328
type: SpeciesReference
stoichiometry: 1.0
species: 901437

901437
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: L-leucine [mitochondrion]

972316
type: SpeciesReference
stoichiometry: 1.0
species: 892701

972352
type: SpeciesReference
stoichiometry: 1.0
species: 901125

978664
type: Reaction
modifier: meta s 2640 b r 0788
product: 978712
reactant: 978688
product: 978700
fast: false
name: nucleoside diphosphatase
notes: GENE_ASSOCIATION:YER005W
reversible: true
reactant: 978676
product: 978724
is: SBO:0000176

978712
type: SpeciesReference
stoichiometry: 1.0
species: 899037

978688
type: SpeciesReference
stoichiometry: 1.0
species: 899145

978700
type: SpeciesReference
stoichiometry: 1.0
species: 895137

978676
type: SpeciesReference
stoichiometry: 1.0
species: 894813

978724
type: SpeciesReference
stoichiometry: 1.0
species: 904256

940847
type: Reaction
product: 940871
fast: false
modifier: meta s 1838 b r 0302
notes: GENE_ASSOCIATION:(YJL200C or YLR304C)
reactant: 940859
reversible: true
modifier: meta s 1839 b r 0302
product: 940883
name: citrate to cis-aconitate(3-)
is: SBO:0000176

940871
type: SpeciesReference
stoichiometry: 1.0
species: 896181

896181
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: cis-aconitate(3-) [mitochondrion]

907988
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ACO1 [mitochondrion]

940859
type: SpeciesReference
stoichiometry: 1.0
species: 896253

908000
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ACO2 [mitochondrion]

940883
type: SpeciesReference
stoichiometry: 1.0
species: 899193

980560
type: Reaction
modifier: meta s 2307 b r 0813
reactant: 980572
notes: GENE_ASSOCIATION:YLR303W
is: SBO:0000176
fast: false
name: O-acetylhomoserine (thiol)-lyase
reactant: 980584
reversible: true
product: 980608
product: 980596
product: 980620

913615
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MET17 [cytoplasm]

980572
type: SpeciesReference
stoichiometry: 1.0
species: 899505

899505
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: hydrogen sulfide [cytoplasm]

980584
type: SpeciesReference
stoichiometry: 1.0
species: 903464

980608
type: SpeciesReference
stoichiometry: 1.0
species: 899037

980596
type: SpeciesReference
stoichiometry: 1.0
species: 894488

980620
type: SpeciesReference
stoichiometry: 1.0
species: 901329

906944
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: zymosteryl palmitoleate [endoplasmic reticulum]

ORG:
  orgname: University of Manchester
n:
  given: Kieran
  family: Smallbone

912835
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: IPK1 [nucleus]

973120
type: Reaction
reversible: true
is: SBO:0000176
notes: GENE_ASSOCIATION:YKL085W
fast: false
modifier: meta s 2295 b r 0713
product: 973156
product: 973168
reactant: 973132
reactant: 973144
product: 973180
name: malate dehydrogenase

913471
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: MDH1 [mitochondrion]

973156
type: SpeciesReference
stoichiometry: 1.0
species: 899097

973168
type: SpeciesReference
stoichiometry: 1.0
species: 903164

973132
type: SpeciesReference
stoichiometry: 1.0
species: 891456

891456
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: (S)-malate [mitochondrion]

973144
type: SpeciesReference
stoichiometry: 1.0
species: 903104

973180
type: SpeciesReference
stoichiometry: 1.0
species: 903824

924419
type: Reaction
reactant: 924431
reversible: true
product: 924467
modifier: meta s 2491 b r 0076
reactant: 924443
notes: GENE_ASSOCIATION:YGL224C
product: 924455
name: 5'-nucleotidase (CMP)
is: SBO:0000176
fast: false

924431
type: SpeciesReference
stoichiometry: 1.0
species: 896277

924467
type: SpeciesReference
stoichiometry: 1.0
species: 904256

915844
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SDT1 [cytoplasm]

924443
type: SpeciesReference
stoichiometry: 1.0
species: 899145

924455
type: SpeciesReference
stoichiometry: 1.0
species: 896445

972136
type: Reaction
reversible: true
reactant: 972160
modifier: 972184
notes: GENE_ASSOCIATION:YML004C
name: lactoylglutathione lyase
is: SBO:0000176
fast: false
reactant: 972148
product: 972172

972160
type: SpeciesReference
stoichiometry: 1.0
species: 902661

902661
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: methylglyoxal [cytoplasm]

911360
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GLO1 [cytoplasm]

972148
type: SpeciesReference
stoichiometry: 1.0
species: 898569

972172
type: SpeciesReference
stoichiometry: 1.0
species: 891178

891178
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (R)-S-lactoylglutathione [cytoplasm]

891311
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: (S)-3-hydroxypalmitoyl-CoA [endoplasmic reticulum]

979360
type: Reaction
fast: false
notes: GENE_ASSOCIATION:YKL067W
reactant: 979384
product: 979396
product: 979408
modifier: 979420
reversible: true
reactant: 979372
is: SBO:0000176
name: nucleoside diphosphate kinase

979384
type: SpeciesReference
stoichiometry: 1.0
species: 896913

896913
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dCDP [cytoplasm]

979396
type: SpeciesReference
stoichiometry: 1.0
species: 894813

979408
type: SpeciesReference
stoichiometry: 1.0
species: 896949

896949
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dCTP [cytoplasm]

979372
type: SpeciesReference
stoichiometry: 1.0
species: 895269

999009
type: Reaction
reversible: true
modifier: 999069
is: SBO:0000176
notes: GENE_ASSOCIATION:YLR027C
name: tyrosine transaminase
product: 999057
product: 999045
fast: false
reactant: 999033
reactant: 999021

999057
type: SpeciesReference
stoichiometry: 1.0
species: 901797

999045
type: SpeciesReference
stoichiometry: 1.0
species: 892725

999033
type: SpeciesReference
stoichiometry: 1.0
species: 901137

901137
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: L-glutamate [peroxisome]

999021
type: SpeciesReference
stoichiometry: 1.0
species: 892941

994666
type: Reaction
reactant: 994678
name: sphingoid base-phosphate phosphatase (phytosphingosine 1-phosphate)
fast: false
reversible: true
product: 994702
is: SBO:0000176
modifier: meta s 2267 b r 1004
notes: GENE_ASSOCIATION:(YJL134W or YKR053C)
reactant: 994690
product: 994714
modifier: meta s 2645 b r 1004

994678
type: SpeciesReference
stoichiometry: 1.0
species: 899157

994702
type: SpeciesReference
stoichiometry: 1.0
species: 904268

913135
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: LCB3 [endoplasmic reticulum]

994690
type: SpeciesReference
stoichiometry: 1.0
species: 904772

904772
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: phytosphingosine 1-phosphate [endoplasmic reticulum]

994714
type: SpeciesReference
stoichiometry: 1.0
species: 904760

917766
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: YSR3 [endoplasmic reticulum]

973036
type: Reaction
reactant: 973060
product: 973084
reactant: 973048
modifier: meta s 2327 b r 0712
notes: GENE_ASSOCIATION:YNL073W
name: lysyl-tRNA synthetase
is: SBO:0000176
product: 973108
fast: false
reactant: 973072
reversible: true
product: 973096

973060
type: SpeciesReference
stoichiometry: 1.0
species: 901485

901485
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: L-lysine [mitochondrion]

973084
type: SpeciesReference
stoichiometry: 1.0
species: 895149

973048
type: SpeciesReference
stoichiometry: 1.0
species: 895305

913855
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: MSK1 [mitochondrion]

973108
type: SpeciesReference
stoichiometry: 1.0
species: 902145

973072
type: SpeciesReference
stoichiometry: 1.0
species: 907184

907184
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: tRNA(Lys), mitchondrial [mitochondrion]

973096
type: SpeciesReference
stoichiometry: 1.0
species: 897405

895605
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: CDP [nucleus]

928199
type: Reaction
fast: false
modifier: meta s 1896 b r 0129
reactant: 928211
notes: GENE_ASSOCIATION:YCR048W
is: SBO:0000176
product: 928235
name: acyl-CoA:sterol acyltransferase
reversible: true
reactant: 928223
product: 928247

928211
type: SpeciesReference
stoichiometry: 1.0
species: 901869

901869
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: lanosterol [endoplasmic reticulum]

928235
type: SpeciesReference
stoichiometry: 1.0
species: 896325

928223
type: SpeciesReference
stoichiometry: 1.0
species: 903728

928247
type: SpeciesReference
stoichiometry: 1.0
species: 901893

901893
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: lanosteryl oleate [endoplasmic reticulum]

920363
type: Reaction
is: SBO:0000176
fast: false
reactant: 920375
notes: GENE_ASSOCIATION:YNL256W
product: 920400
product: 920413
reversible: true
reactant: 920387
product: 920425
modifier: 920437
name: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase

920375
type: SpeciesReference
stoichiometry: 1.0
species: 892362

920400
type: SpeciesReference
stoichiometry: 1.0
species: 890851

920413
type: SpeciesReference
stoichiometry: 1.0
species: 895149

920387
type: SpeciesReference
stoichiometry: 1.0
species: 895305

920425
type: SpeciesReference
stoichiometry: 1.0
species: 899097

979936
type: Reaction
modifier: meta s 2640 b r 0805
product: 979996
name: nucleoside triphosphatase
product: 979984
notes: GENE_ASSOCIATION:YER005W
fast: false
reactant: 979948
reactant: 979960
is: SBO:0000176
reversible: true
product: 979972

979996
type: SpeciesReference
stoichiometry: 1.0
species: 906464

979984
type: SpeciesReference
stoichiometry: 1.0
species: 904256

979948
type: SpeciesReference
stoichiometry: 1.0
species: 899145

979960
type: SpeciesReference
stoichiometry: 1.0
species: 906716

979972
type: SpeciesReference
stoichiometry: 1.0
species: 899037

899805
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: inositol phosphomannosylinositol phosphoceramide B (C26) [mitochondrion]

915031
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: PNP1 [mitochondrion]

912643
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ILV3 [mitochondrion]

906416
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: Tyr-tRNA(Tyr) [cytoplasm]

928139
type: Reaction
modifier: meta s 1896 b r 0128
name: acyl-CoA:sterol acyltransferase
reactant: 928151
reversible: true
notes: GENE_ASSOCIATION:YCR048W
product: 928187
reactant: 928163
product: 928175
fast: false
is: SBO:0000176

928151
type: SpeciesReference
stoichiometry: 1.0
species: 898125

898125
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: fecosterol [endoplasmic reticulum]

928187
type: SpeciesReference
stoichiometry: 1.0
species: 898185

898185
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: fecosteryl oleate [endoplasmic reticulum]

928163
type: SpeciesReference
stoichiometry: 1.0
species: 903728

928175
type: SpeciesReference
stoichiometry: 1.0
species: 896325

906836
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: zymosterol [extracellular]

976685
type: Reaction
product: 976733
reactant: 976709
name: N-formyl-L-kynurenine amidohydrolase
fast: false
product: 976721
reactant: 976697
modifier: meta s 1945 b r 0762
notes: GENE_ASSOCIATION:YJL060W
reversible: true
product: 976745
is: SBO:0000176

976733
type: SpeciesReference
stoichiometry: 1.0
species: 899037

976709
type: SpeciesReference
stoichiometry: 1.0
species: 903044

903044
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: N-formyl-L-kynurenine [cytoplasm]

976721
type: SpeciesReference
stoichiometry: 1.0
species: 898353

976697
type: SpeciesReference
stoichiometry: 1.0
species: 899145

909272
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: BNA3 [cytoplasm]

976745
type: SpeciesReference
stoichiometry: 1.0
species: 901401

901401
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-kynurenine [cytoplasm]

893480
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 4,5-bis(diphospho)-1D-myo-inositol tetrakisphosphate [cytoplasm]

891203
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (R,R)-2,3-butanediol [cytoplasm]

954652
type: Reaction
reactant: 954664
name: fructose-bisphosphatase
product: 954700
is: SBO:0000176
reactant: 954676
reversible: true
notes: GENE_ASSOCIATION:YLR377C
fast: false
product: 954688
modifier: 954712

954664
type: SpeciesReference
stoichiometry: 1.0
species: 896577

954700
type: SpeciesReference
stoichiometry: 1.0
species: 904256

954676
type: SpeciesReference
stoichiometry: 1.0
species: 899145

954688
type: SpeciesReference
stoichiometry: 1.0
species: 896601

910784
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FBP1 [cytoplasm]

909716
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: CIT2 [peroxisome]

meta r 1149
type: Reaction
product: 004805
reactant: 004793
notes: GENE_ASSOCIATION:
is described by: http://identifiers.org/pubmed/15201274
is: SBO:0000185
fast: false
reversible: true
name: ethanolamine transport

004805
type: SpeciesReference
stoichiometry: 1.0
species: 897909

897909
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ethanolamine [cytoplasm]

004793
type: SpeciesReference
stoichiometry: 1.0
species: 897921

897921
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: ethanolamine [extracellular]

914827
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: PIC2 [mitochondrial membrane]

905468
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: siroheme [cytoplasm]

939467
type: Reaction
notes: GENE_ASSOCIATION:(YJL200C or YLR304C)
modifier: meta s 1839 b r 0280
reversible: true
modifier: meta s 1838 b r 0280
is: SBO:0000176
reactant: 939479
name: cis-aconitate(3-) to isocitrate
product: 939503
fast: false
reactant: 939491

939479
type: SpeciesReference
stoichiometry: 1.0
species: 896181

939503
type: SpeciesReference
stoichiometry: 1.0
species: 900561

939491
type: SpeciesReference
stoichiometry: 1.0
species: 899193

892314
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-[3-carboxy-3-(methylammonio)propyl]-L-histidine [cytoplasm]

987747
type: Reaction
reversible: true
modifier: meta s 2022 b r 0921
product: 987783
fast: false
reactant: 987759
notes: GENE_ASSOCIATION:YDR294C
product: 987771
name: Phytosphingosine phosphate lyase
is: SBO:0000176

910196
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: DPL1 [endoplasmic reticulum]

987783
type: SpeciesReference
stoichiometry: 1.0
species: 903548

903548
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: O-phosphoethanolamine [endoplasmic reticulum]

987759
type: SpeciesReference
stoichiometry: 1.0
species: 904772

987771
type: SpeciesReference
stoichiometry: 1.0
species: 892494

892494
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 2-hydroxyhexadecanal [endoplasmic reticulum]

900249
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: inositol-P-ceramide C (C24) [endoplasmic reticulum]

913747
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: MIS1 [mitochondrion]

000809
type: Reaction
reversible: true
modifier: meta s 2607 b r 1089
reactant: 000833
product: 000857
product: 000869
reactant: 000821
notes: GENE_ASSOCIATION:YGR094W
is: SBO:0000176
fast: false
reactant: 000845
product: 000881
name: valyl-tRNA synthetase

917310
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: VAS1 [cytoplasm]

000833
type: SpeciesReference
stoichiometry: 1.0
species: 901821

000857
type: SpeciesReference
stoichiometry: 1.0
species: 895137

000869
type: SpeciesReference
stoichiometry: 1.0
species: 897369

000821
type: SpeciesReference
stoichiometry: 1.0
species: 895269

000845
type: SpeciesReference
stoichiometry: 1.0
species: 907340

907340
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: tRNA(Val), cytoplasmic [cytoplasm]

000881
type: SpeciesReference
stoichiometry: 1.0
species: 906740

906740
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: Val-tRNA(Val) [cytoplasm]

892953
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3-(imidazol-4-yl)-2-oxopropyl dihydrogen phosphate [cytoplasm]

896745
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: D-mannose [cytoplasm]

946609
type: Reaction
product: 946700
fast: false
reactant: 946687
product: 946739
reactant: 946674
modifier: meta s 2685 b r 0377
notes: GENE_ASSOCIATION:((YGL205W and YIL160C and YKR009C and YLR284C and YNL202W) or (YGL205W and YIL160C and YKR009C and YLR284C and YNL202W and YOR180C) or (YGL205W and YIL160C and YKR009C and YNL202W and YOR180C))
name: fatty acid oxidation
product: 946751
product: 946726
reactant: 946635
modifier: meta s 2687 b r 0377
product: 946713
is: SBO:0000176
reactant: 946661
reversible: true
reactant: 946648
modifier: meta s 2692 b r 0377
reactant: 946622

946700
type: SpeciesReference
stoichiometry: 9.0
species: 894633

946687
type: SpeciesReference
stoichiometry: 8.0
species: 903884

946739
type: SpeciesReference
stoichiometry: 8.0
species: 903176

946674
type: SpeciesReference
stoichiometry: 1.0
species: 903740

946751
type: SpeciesReference
stoichiometry: 1.0
species: 903224

946726
type: SpeciesReference
stoichiometry: 8.0
species: 899493

946635
type: SpeciesReference
stoichiometry: 8.0
species: 899217

946713
type: SpeciesReference
stoichiometry: 7.0
species: 899121

946661
type: SpeciesReference
stoichiometry: 1.0
species: 903272

946648
type: SpeciesReference
stoichiometry: 8.0
species: 903128

946622
type: SpeciesReference
stoichiometry: 8.0
species: 896373

904232
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: phenylacetaldehyde [mitochondrion]

976517
type: Reaction
reversible: true
name: N-acetylglucosamine-6-phosphate synthase
product: 976565
is: SBO:0000176
notes: GENE_ASSOCIATION:YFL017C
fast: false
modifier: meta s 2124 b r 0760
reactant: 976529
product: 976577
reactant: 976541
product: 976553

976565
type: SpeciesReference
stoichiometry: 1.0
species: 899037

976529
type: SpeciesReference
stoichiometry: 1.0
species: 894597

976577
type: SpeciesReference
stoichiometry: 1.0
species: 902985

902985
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: N-acetyl-D-glucosamine 6-phosphate [cytoplasm]

976541
type: SpeciesReference
stoichiometry: 1.0
species: 895017

976553
type: SpeciesReference
stoichiometry: 1.0
species: 896313

973192
type: Reaction
fast: false
is: SBO:0000176
reversible: true
product: 973228
reactant: 973204
name: malate dehydrogenase, cytoplasmic
product: 973252
reactant: 973216
notes: GENE_ASSOCIATION:YOL126C
modifier: meta s 2296 b r 0714
product: 973240

973228
type: SpeciesReference
stoichiometry: 1.0
species: 899037

973204
type: SpeciesReference
stoichiometry: 1.0
species: 891444

891444
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (S)-malate [cytoplasm]

973252
type: SpeciesReference
stoichiometry: 1.0
species: 903812

973216
type: SpeciesReference
stoichiometry: 1.0
species: 903080

913483
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MDH2 [cytoplasm]

973240
type: SpeciesReference
stoichiometry: 1.0
species: 903140

894621
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: acetyl-CoA [nucleus]

897693
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ergosta-5,7,22,24(28)-tetraen-3beta-ol [cytoplasm]

002669
type: Reaction
notes: GENE_ASSOCIATION:YPR021C
product: 002717
product: 002705
is: SBO:0000185
fast: false
modifier: meta s 1868 b r 1117
reactant: 002693
reactant: 002681
name: aspartate transport
reversible: true

002717
type: SpeciesReference
stoichiometry: 1.0
species: 900921

900921
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: L-aspartate [mitochondrion]

002705
type: SpeciesReference
stoichiometry: 1.0
species: 899097

908348
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: AGC1 [mitochondrial membrane]

002693
type: SpeciesReference
stoichiometry: 1.0
species: 900897

002681
type: SpeciesReference
stoichiometry: 1.0
species: 899037

974104
type: Reaction
product: 974164
notes: GENE_ASSOCIATION:(YDR502C or YLR180W)
product: 974176
reactant: 974140
reactant: 974128
product: 974152
reversible: true
modifier: meta s 2485 b r 0726
is: SBO:0000176
modifier: meta s 2486 b r 0726
fast: false
reactant: 974116
name: methionine adenosyltransferase

974164
type: SpeciesReference
stoichiometry: 1.0
species: 904256

974176
type: SpeciesReference
stoichiometry: 1.0
species: 905300

974140
type: SpeciesReference
stoichiometry: 1.0
species: 901509

974128
type: SpeciesReference
stoichiometry: 1.0
species: 899145

974152
type: SpeciesReference
stoichiometry: 1.0
species: 897369

915779
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SAM2 [cytoplasm]

974116
type: SpeciesReference
stoichiometry: 1.0
species: 895269

978328
type: Reaction
reactant: 978352
reversible: true
reactant: 978364
product: 978388
name: nicotinamide-nucleotide adenylyltransferase
notes: GENE_ASSOCIATION:(YGR010W or YLR328W)
product: 978376
modifier: meta s 2347 b r 0784
is: SBO:0000176
modifier: meta s 2345 b r 0784
fast: false
reactant: 978340

978352
type: SpeciesReference
stoichiometry: 1.0
species: 899109

978364
type: SpeciesReference
stoichiometry: 1.0
species: 903392

903392
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: NMN [nucleus]

978388
type: SpeciesReference
stoichiometry: 1.0
species: 903116

978376
type: SpeciesReference
stoichiometry: 1.0
species: 897417

914095
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: NMA2 [nucleus]

978340
type: SpeciesReference
stoichiometry: 1.0
species: 895317

907532
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: acetylated protein with terminal(Met-Leu) [cytoplasm]

937583
type: Reaction
is: SBO:0000176
fast: false
modifier: meta s 1994 b r 0255
product: 937619
notes: GENE_ASSOCIATION:YGR088W
reversible: true
name: catalase
reactant: 937595
product: 937607

937619
type: SpeciesReference
stoichiometry: 1.0
species: 903848

937595
type: SpeciesReference
stoichiometry: 2.0
species: 899457

937607
type: SpeciesReference
stoichiometry: 2.0
species: 899145

899781
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: inositol phosphomannosylinositol phosphoceramide B (C26) [endoplasmic reticulum]

911036
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: FPS1 [cell envelope]

943211
type: Reaction
product: 943283
is: SBO:0000176
product: 943271
reactant: 943235
fast: false
name: deoxyhypusine synthase, cytosolic/mitochondrial
product: 943259
reversible: true
notes: GENE_ASSOCIATION:YHR068W
reactant: 943223
reactant: 943247
modifier: 943294

943283
type: SpeciesReference
stoichiometry: 1.0
species: 906440

943271
type: SpeciesReference
stoichiometry: 1.0
species: 906344

906344
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: trimethylenediamine [cytoplasm]

943235
type: SpeciesReference
stoichiometry: 1.0
species: 905564

943259
type: SpeciesReference
stoichiometry: 1.0
species: 893576

893576
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 4-aminobutanal [cytoplasm]

943223
type: SpeciesReference
stoichiometry: 1.0
species: 899145

943247
type: SpeciesReference
stoichiometry: 1.0
species: 906452

910304
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: DYS1 [mitochondrial membrane]

897837
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ergosteryl palmitoleate [endoplasmic reticulum]

899697
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: inositol phosphomannosylinositol phosphoceramide A (C24) [mitochondrion]

981712
type: Reaction
notes: GENE_ASSOCIATION:YDR126W
reactant: 981724
name: palmitoyl transferase for SNarE YAL014C
fast: false
is: SBO:0000176
reversible: true
product: 981748
reactant: 981736
modifier: meta s 2533 b r 0834

981724
type: SpeciesReference
stoichiometry: 1.0
species: 904040

981748
type: SpeciesReference
stoichiometry: 1.0
species: 907736

981736
type: SpeciesReference
stoichiometry: 1.0
species: 916416

916416
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SYN8 [cytoplasm]

913063
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: KTR3 [Golgi]

999729
type: Reaction
fast: false
name: urea carboxylase
reactant: 999741
is: SBO:0000176
product: 999789
product: 999801
product: 999813
modifier: 999825
reactant: 999765
notes: GENE_ASSOCIATION:YBR208C
reactant: 999753
reversible: true
product: 999777

999741
type: SpeciesReference
stoichiometry: 1.0
species: 895269

999789
type: SpeciesReference
stoichiometry: 1.0
species: 899037

999801
type: SpeciesReference
stoichiometry: 1.0
species: 904256

999813
type: SpeciesReference
stoichiometry: 1.0
species: 906656

910268
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: DUR1,2 [cytoplasm]

999765
type: SpeciesReference
stoichiometry: 1.0
species: 906632

906632
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: urea [cytoplasm]

999753
type: SpeciesReference
stoichiometry: 1.0
species: 895401

999777
type: SpeciesReference
stoichiometry: 1.0
species: 894813

933792
type: Reaction
notes: GENE_ASSOCIATION:YOL058W
product: 933852
name: argininosuccinate synthase
product: 933864
fast: false
is: SBO:0000176
modifier: 933888
product: 933876
reactant: 933804
reversible: true
reactant: 933816
product: 933840
reactant: 933828

933852
type: SpeciesReference
stoichiometry: 1.0
species: 895137

933864
type: SpeciesReference
stoichiometry: 1.0
species: 897369

908708
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ARG1 [cytoplasm]

933876
type: SpeciesReference
stoichiometry: 1.0
species: 899037

933804
type: SpeciesReference
stoichiometry: 1.0
species: 895269

933816
type: SpeciesReference
stoichiometry: 1.0
species: 900897

933840
type: SpeciesReference
stoichiometry: 1.0
species: 890961

933828
type: SpeciesReference
stoichiometry: 1.0
species: 900969

965210
type: Reaction
name: IPC synthase
modifier: meta s 2656 b r 0592
fast: false
product: 965258
product: 965246
notes: GENE_ASSOCIATION:(YDR367W and YKL004W)
is: SBO:0000176
reactant: 965234
reactant: 965222
reversible: true

965258
type: SpeciesReference
stoichiometry: 1.0
species: 900117

900117
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: inositol-P-ceramide B (C24) [Golgi]

965246
type: SpeciesReference
stoichiometry: 1.0
species: 897225

965234
type: SpeciesReference
stoichiometry: 1.0
species: 895773

965222
type: SpeciesReference
stoichiometry: 1.0
species: 891733

918475
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GLG1:GSY1 [cytoplasm]

994618
type: Reaction
name: sphinganine phosphate lyase
product: 994654
modifier: meta s 2022 b r 1003
product: 994642
is: SBO:0000176
reactant: 994630
fast: false
reversible: true
notes: GENE_ASSOCIATION:YDR294C

994654
type: SpeciesReference
stoichiometry: 1.0
species: 903548

994642
type: SpeciesReference
stoichiometry: 1.0
species: 899349

899349
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: hexadecanal [endoplasmic reticulum]

994630
type: SpeciesReference
stoichiometry: 1.0
species: 905648

905648
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: sphinganine 1-phosphate [endoplasmic reticulum]

957975
type: Reaction
name: glycerol-3-phosphate/dihydroxyacetone phosphate acyltransferase
notes: GENE_ASSOCIATION:(YBL011W or YKR067W)
reactant: 957987
is: SBO:0000176
modifier: meta s 2138 b r 0493
reactant: 957999
fast: false
product: 958011
product: 958023
reversible: true
modifier: meta s 2490 b r 0493

957987
type: SpeciesReference
stoichiometry: 1.0
species: 894645

911588
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: GPT2 [endoplasmic reticulum]

957999
type: SpeciesReference
stoichiometry: 1.0
species: 897333

897333
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: dihydroxyacetone phosphate [endoplasmic reticulum]

958011
type: SpeciesReference
stoichiometry: 1.0
species: 894669

894669
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: acylglycerone phosphate [endoplasmic reticulum]

958023
type: SpeciesReference
stoichiometry: 1.0
species: 896325

915831
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: SCT1 [endoplasmic reticulum]

906320
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: triglyceride [cytoplasm]

976313
type: Reaction
notes: GENE_ASSOCIATION:(YDR287W or YHR046C)
modifier: meta s 2233 b r 0757
product: 976349
fast: false
reactant: 976325
product: 976361
name: myo-inositol 1-phosphatase
reactant: 976337
modifier: meta s 2232 b r 0757
reversible: true
is: SBO:0000176

976349
type: SpeciesReference
stoichiometry: 1.0
species: 902685

902685
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: myo-inositol [cytoplasm]

976325
type: SpeciesReference
stoichiometry: 1.0
species: 892156

976361
type: SpeciesReference
stoichiometry: 1.0
species: 904256

976337
type: SpeciesReference
stoichiometry: 1.0
species: 899145

912715
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: INM1 [cytoplasm]

891432
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: (S)-lactate [mitochondrion]

894705
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: adenine [extracellular]

959307
type: Reaction
reactant: 959319
product: 959343
reversible: true
modifier: meta s 2705 b r 0510
product: 959355
modifier: meta s 2706 b r 0510
notes: GENE_ASSOCIATION:((YFR015C and YJL137C) or (YFR015C and YKR058W) or (YJL137C and YLR258W) or (YKR058W and YLR258W))
modifier: meta s 2704 b r 0510
modifier: meta s 2707 b r 0510
is: SBO:0000176
fast: false
reactant: 959331
product: 959367
name: glycogen (starch) synthase

959319
type: SpeciesReference
stoichiometry: 1.0
species: 899145

959343
type: SpeciesReference
stoichiometry: 1.0
species: 898833

898833
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: glycogen [cytoplasm]

918487
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GLG1:GSY2 [cytoplasm]

959355
type: SpeciesReference
stoichiometry: 1.0
species: 899037

918499
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GLG2:GSY1 [cytoplasm]

918511
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GLG2:GSY2 [cytoplasm]

959331
type: SpeciesReference
stoichiometry: 1.0
species: 906524

959367
type: SpeciesReference
stoichiometry: 1.0
species: 906464

917430
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: XKS1 [cytoplasm]

905960
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: tetracosanoyl-CoA [endoplasmic reticulum]

925403
type: Reaction
modifier: 925487
product: 925463
notes: GENE_ASSOCIATION:(YIL107C or YOL136C)
product: 925439
name: 6-phosphofructo-2-kinase
product: 925451
reactant: 925427
modifier: 925475
reversible: true
is: SBO:0000176
reactant: 925415
fast: false

925463
type: SpeciesReference
stoichiometry: 1.0
species: 899037

925439
type: SpeciesReference
stoichiometry: 1.0
species: 894813

925451
type: SpeciesReference
stoichiometry: 1.0
species: 895365

895365
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: beta-D-fructose 2,6-bisphosphate [cytoplasm]

925427
type: SpeciesReference
stoichiometry: 1.0
species: 896601

914551
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PFK26 [cytoplasm]

925415
type: SpeciesReference
stoichiometry: 1.0
species: 895269

950032
type: Reaction
reversible: true
is: SBO:0000176
reactant: 950044
fast: false
reactant: 950056
reactant: 950068
modifier: 950116
product: 950104
name: fatty-acid--CoA ligase (hexadecenoate)
notes: GENE_ASSOCIATION:YER015W
product: 950080
product: 950092

950044
type: SpeciesReference
stoichiometry: 1.0
species: 895329

950056
type: SpeciesReference
stoichiometry: 1.0
species: 896373

950068
type: SpeciesReference
stoichiometry: 1.0
species: 903992

950104
type: SpeciesReference
stoichiometry: 1.0
species: 899337

950080
type: SpeciesReference
stoichiometry: 1.0
species: 895173

950092
type: SpeciesReference
stoichiometry: 1.0
species: 897429

923458
type: Reaction
fast: false
is: SBO:0000176
product: 923506
modifier: meta s 2373 b r 0062
reactant: 923470
modifier: meta s 2374 b r 0062
name: 3-methyl-2-oxobutanoate decarboxylase
notes: GENE_ASSOCIATION:(YGR087C or YLR044C or YLR134W)
reversible: true
modifier: meta s 2375 b r 0062
reactant: 923482
product: 923494

923506
type: SpeciesReference
stoichiometry: 1.0
species: 900525

900525
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: isobutyraldehyde [cytoplasm]

923470
type: SpeciesReference
stoichiometry: 1.0
species: 893216

893216
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3-methyl-2-oxobutanoate [cytoplasm]

923482
type: SpeciesReference
stoichiometry: 1.0
species: 899037

923494
type: SpeciesReference
stoichiometry: 1.0
species: 895485

914731
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PHO8 [cytoplasm]

905372
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: S-methyl-5-thio-alpha-D-ribose 1-phosphate [cytoplasm]

meta r 1107
type: Reaction
product: 001949
reactant: 001937
notes: GENE_ASSOCIATION:
is described by: http://identifiers.org/pubmed/10653746
is: SBO:0000185
fast: false
reversible: true
name: acetic ester transport

001949
type: SpeciesReference
stoichiometry: 1.0
species: 897945

001937
type: SpeciesReference
stoichiometry: 1.0
species: 897933

897933
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ethyl acetate [cytoplasm]

952492
type: Reaction
reversible: true
product: 952588
reactant: 952552
reactant: 952516
is: SBO:0000176
notes: GENE_ASSOCIATION:(YBR026C and YER061C and YHR067W and YKL055C and YKL192C and YOR221C)
fast: false
reactant: 952504
modifier: meta s 2649 b r 0428
reactant: 952528
product: 952600
name: fatty-acyl-ACP synthase (n-C16:1ACP)
product: 952612
reactant: 952540
product: 952576
product: 952564

952588
type: SpeciesReference
stoichiometry: 3.0
species: 899193

952552
type: SpeciesReference
stoichiometry: 1.0
species: 903872

952516
type: SpeciesReference
stoichiometry: 4.0
species: 899097

952504
type: SpeciesReference
stoichiometry: 1.0
species: 895569

895569
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: carboxyacetyl-ACP [mitochondrion]

917814
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ACP1:CEM1:ETR1:HTD2:MCT1:OAR1 [mitochondrion]

952528
type: SpeciesReference
stoichiometry: 1.0
species: 902829

902829
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: myristoyl-ACP [mitochondrion]

952600
type: SpeciesReference
stoichiometry: 3.0
species: 903212

952612
type: SpeciesReference
stoichiometry: 1.0
species: 908072

908072
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: acyl-carrier protein [mitochondrion]

952540
type: SpeciesReference
stoichiometry: 3.0
species: 903260

952576
type: SpeciesReference
stoichiometry: 1.0
species: 896205

896205
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: cis-palmitoleoyl-ACP [mitochondrion]

952564
type: SpeciesReference
stoichiometry: 1.0
species: 895521

975953
type: Reaction
modifier: meta s 2673 b r 0751
reactant: 975977
name: MIPC synthase
is: SBO:0000176
reversible: true
product: 976001
product: 975989
reactant: 975965
modifier: meta s 2672 b r 0751
fast: false
notes: GENE_ASSOCIATION:((YBR036C and YPL057C) or (YBR036C and YBR161W))

975977
type: SpeciesReference
stoichiometry: 1.0
species: 900117

976001
type: SpeciesReference
stoichiometry: 1.0
species: 902349

902349
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: mannosylinositol phosphorylceramide B (C24) [Golgi]

975989
type: SpeciesReference
stoichiometry: 1.0
species: 898449

975965
type: SpeciesReference
stoichiometry: 1.0
species: 898497

910184
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: DPH5 [cytoplasm]

985155
type: Reaction
reactant: 985179
product: 985191
name: phosphoadenylyl-sulfate reductase (thioredoxin)
product: 985203
reactant: 985167
reversible: true
product: 985227
is: SBO:0000176
notes: GENE_ASSOCIATION:((YGR209C and YPR167C) or (YLR043C and YPR167C))
product: 985215
modifier: meta s 2727 b r 0883
modifier: meta s 2726 b r 0883
fast: false

985179
type: SpeciesReference
stoichiometry: 1.0
species: 907364

985191
type: SpeciesReference
stoichiometry: 1.0
species: 894777

894777
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: adenosine 3',5'-bismonophosphate [cytoplasm]

985203
type: SpeciesReference
stoichiometry: 2.0
species: 899037

985167
type: SpeciesReference
stoichiometry: 1.0
species: 892893

892893
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3'-phospho-5'-adenylyl sulfate [cytoplasm]

985227
type: SpeciesReference
stoichiometry: 1.0
species: 907412

985215
type: SpeciesReference
stoichiometry: 1.0
species: 905840

918751
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MET16:TRX2 [cytoplasm]

939779
type: Reaction
is: SBO:0000176
reactant: 939791
notes: GENE_ASSOCIATION:(YBR002C or YMR101C)
modifier: meta s 2462 b r 0285
product: 939827
fast: false
reversible: true
reactant: 939803
modifier: meta s 2521 b r 0285
name: cis-prenyltransferase step 05
product: 939815

939791
type: SpeciesReference
stoichiometry: 1.0
species: 899289

899289
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: heptaprenyl diphosphate [lipid particle]

939827
type: SpeciesReference
stoichiometry: 1.0
species: 903692

939803
type: SpeciesReference
stoichiometry: 1.0
species: 900597

939815
type: SpeciesReference
stoichiometry: 1.0
species: 897393

909536
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CDC19 [cytoplasm]

899733
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: inositol phosphomannosylinositol phosphoceramide A (C26) [mitochondrion]

924911
type: Reaction
reversible: true
product: 924959
reactant: 924923
name: 5-diphosphoinositol-1,2,3,4,6-pentakisphosphate diphosphohydrolase
product: 924971
notes: GENE_ASSOCIATION:YOR163W
is: SBO:0000176
reactant: 924935
fast: false
modifier: meta s 2007 b r 0082
product: 924947

924959
type: SpeciesReference
stoichiometry: 1.0
species: 902745

924923
type: SpeciesReference
stoichiometry: 1.0
species: 894056

924971
type: SpeciesReference
stoichiometry: 1.0
species: 904256

924935
type: SpeciesReference
stoichiometry: 1.0
species: 899145

910016
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: DDP1 [cytoplasm]

924947
type: SpeciesReference
stoichiometry: 2.0
species: 899037

922354
type: Reaction
reversible: true
fast: false
is: SBO:0000176
notes: GENE_ASSOCIATION:YKR009C
name: 3-hydroxyacyl-CoA dehydratase (3-hydroxydecanoyl-CoA)
reactant: 922366
product: 922390
product: 922378
modifier: 922402

922366
type: SpeciesReference
stoichiometry: 1.0
species: 891263

922390
type: SpeciesReference
stoichiometry: 1.0
species: 906224

922378
type: SpeciesReference
stoichiometry: 1.0
species: 899217

913339
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: LYS12 [mitochondrion]

962451
type: Reaction
notes: GENE_ASSOCIATION:YDR272W
name: hydroxyacylglutathione hydrolase
modifier: 962523
product: 962499
fast: false
product: 962511
product: 962487
is: SBO:0000176
reactant: 962463
reversible: true
reactant: 962475

911372
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GLO2 [cytoplasm]

962499
type: SpeciesReference
stoichiometry: 1.0
species: 898569

962511
type: SpeciesReference
stoichiometry: 1.0
species: 899037

962487
type: SpeciesReference
stoichiometry: 1.0
species: 891081

891081
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: (R)-lactate [cytoplasm]

962463
type: SpeciesReference
stoichiometry: 1.0
species: 891178

962475
type: SpeciesReference
stoichiometry: 1.0
species: 899145

992054
type: Reaction
notes: GENE_ASSOCIATION:(YER070W or YJL026W or YIL066C or YGR180C or (YER070W and YJL026W) or (YER070W and YGR180C) or (YER070W and YJL026W) or (YGR180C and YIL066C))
reactant: 992078
modifier: 992198
modifier: 992126
fast: false
product: 992090
modifier: 992174
modifier: 992162
is: SBO:0000176
name: ribonucleotide reductase
reversible: true
modifier: 992138
modifier: 992210
reactant: 992066
modifier: 992186
product: 992102
modifier: 992150
product: 992114

992078
type: SpeciesReference
stoichiometry: 1.0
species: 907364

992090
type: SpeciesReference
stoichiometry: 1.0
species: 896913

992066
type: SpeciesReference
stoichiometry: 1.0
species: 895593

992102
type: SpeciesReference
stoichiometry: 1.0
species: 899145

992114
type: SpeciesReference
stoichiometry: 1.0
species: 907412

974657
type: Reaction
modifier: 974717
is: SBO:0000176
name: methylenetetrahydrofolate dehydrogenase (NADP)
product: 974693
reversible: true
fast: false
product: 974705
notes: GENE_ASSOCIATION:YBR084W
reactant: 974669
reactant: 974681

974693
type: SpeciesReference
stoichiometry: 1.0
species: 893900

974705
type: SpeciesReference
stoichiometry: 1.0
species: 903260

974669
type: SpeciesReference
stoichiometry: 1.0
species: 893924

974681
type: SpeciesReference
stoichiometry: 1.0
species: 903212

893096
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 3-hydroxy-3-methylglutaryl-CoA [mitochondrion]

898809
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: glycerone [cytoplasm]

896337
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: coenzyme A [lipid particle]

993512
type: Reaction
reactant: 993549
product: 993585
product: 993573
reactant: 993525
reversible: true
product: 993561
product: 993598
reactant: 993537
modifier: meta s 2283 b r 0988
notes: GENE_ASSOCIATION:YIR034C
is: SBO:0000176
fast: false
name: saccharopine dehydrogenase (NAD, L-lysine forming)

993549
type: SpeciesReference
stoichiometry: 1.0
species: 903080

993585
type: SpeciesReference
stoichiometry: 1.0
species: 901461

993573
type: SpeciesReference
stoichiometry: 1.0
species: 899037

993525
type: SpeciesReference
stoichiometry: 1.0
species: 899145

993561
type: SpeciesReference
stoichiometry: 1.0
species: 892689

993598
type: SpeciesReference
stoichiometry: 1.0
species: 903140

993537
type: SpeciesReference
stoichiometry: 1.0
species: 901617

929986
type: Reaction
notes: GENE_ASSOCIATION:YFL030W
is: SBO:0000176
modifier: 930046
product: 930022
reactant: 929998
fast: false
name: alanine glyoxylate aminotransferase
reversible: true
product: 930034
reactant: 930010

908396
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: AGX1 [cytoplasm]

930022
type: SpeciesReference
stoichiometry: 1.0
species: 901221

929998
type: SpeciesReference
stoichiometry: 1.0
species: 898881

930034
type: SpeciesReference
stoichiometry: 1.0
species: 905108

930010
type: SpeciesReference
stoichiometry: 1.0
species: 900705

990795
type: Reaction
reactant: 990807
reactant: 990819
reactant: 990831
is: SBO:0000176
fast: false
reactant: 990842
name: quinone oxidoreductase
reversible: true
product: 990866
product: 990879
notes: GENE_ASSOCIATION:(YDR204W and YGL119W and YGR255C and YLR201C and YML110C and YOL096C and YOR125C)
product: 990854
modifier: 990890

990807
type: SpeciesReference
stoichiometry: 1.0
species: 892458

892458
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 2-hexaprenyl-6-methoxy-3-methyl-1,4-benzoquinone [mitochondrion]

990819
type: SpeciesReference
stoichiometry: 1.0
species: 899097

990831
type: SpeciesReference
stoichiometry: 1.0
species: 903164

990842
type: SpeciesReference
stoichiometry: 1.0
species: 903872

990866
type: SpeciesReference
stoichiometry: 1.0
species: 899193

990879
type: SpeciesReference
stoichiometry: 1.0
species: 903104

990854
type: SpeciesReference
stoichiometry: 1.0
species: 892434

892434
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 2-hexaprenyl-5-hydroxy-6-methoxy-3-methyl-1,4-benzoquinone [mitochondrion]

917922
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: CAT5:COQ3:COQ4:COQ5:COQ6:COQ8:COQ9 [mitochondrion]

929855
type: Reaction
product: 929914
product: 929902
is: SBO:0000176
reversible: true
fast: false
reactant: 929878
modifier: meta s 2306 b r 0154
product: 929890
reactant: 929867
name: adenylyl-sulfate kinase
notes: GENE_ASSOCIATION:YKL001C

929914
type: SpeciesReference
stoichiometry: 1.0
species: 899037

929902
type: SpeciesReference
stoichiometry: 1.0
species: 894813

929878
type: SpeciesReference
stoichiometry: 1.0
species: 895269

913603
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MET14 [cytoplasm]

929890
type: SpeciesReference
stoichiometry: 1.0
species: 892893

929867
type: SpeciesReference
stoichiometry: 1.0
species: 893816

893816
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5'-adenylyl sulfate [cytoplasm]

958707
type: Reaction
product: 958743
reactant: 958719
reactant: 958731
modifier: meta s 2503 b r 0503
product: 958767
name: glycine hydroxymethyltransferase
reversible: true
product: 958755
fast: false
notes: GENE_ASSOCIATION:YBR263W
is: SBO:0000176

958743
type: SpeciesReference
stoichiometry: 1.0
species: 893924

958719
type: SpeciesReference
stoichiometry: 1.0
species: 901665

901665
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: L-serine [mitochondrion]

958731
type: SpeciesReference
stoichiometry: 1.0
species: 906044

958767
type: SpeciesReference
stoichiometry: 1.0
species: 901245

958755
type: SpeciesReference
stoichiometry: 1.0
species: 899193

912271
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: HTS1 [mitochondrion]

917322
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: VAS1 [mitochondrion]

968210
type: Reaction
reactant: 968234
reversible: true
name: IPS phospholipase C
notes: GENE_ASSOCIATION:YER019W
is: SBO:0000176
product: 968258
fast: false
reactant: 968222
product: 968246
modifier: meta s 2246 b r 0642

968234
type: SpeciesReference
stoichiometry: 1.0
species: 899913

899913
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: inositol phosphomannosylinositol phosphoceramide C (C24) [mitochondrion]

968258
type: SpeciesReference
stoichiometry: 1.0
species: 902229

968222
type: SpeciesReference
stoichiometry: 1.0
species: 899193

968246
type: SpeciesReference
stoichiometry: 1.0
species: 895929

895929
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ceramide-3 (C24) [mitochondrion]

998601
type: Reaction
reactant: 998637
modifier: meta s 2280 b r 1059
name: type II phosphatidylinositol 4-kinase
reversible: true
reactant: 998613
product: 998649
is: SBO:0000176
notes: GENE_ASSOCIATION:YJL100W
product: 998661
reactant: 998625
fast: false

998637
type: SpeciesReference
stoichiometry: 1.0
species: 899037

913291
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: LSB6 [cytoplasm]

998613
type: SpeciesReference
stoichiometry: 1.0
species: 891709

891709
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 1-phosphatidyl-1D-myo-inositol [cytoplasm]

998649
type: SpeciesReference
stoichiometry: 1.0
species: 891962

891962
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 1-phosphatidyl-1D-myo-inositol 4-phosphate [cytoplasm]

998661
type: SpeciesReference
stoichiometry: 1.0
species: 894813

998625
type: SpeciesReference
stoichiometry: 1.0
species: 895269

909476
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CAR2 [cytoplasm]

895389
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: beta-D-mannosyldiacetylchitobiosyldiphosphodolichol [Golgi]

921884
type: Reaction
product: 921908
fast: false
product: 921932
reversible: true
reactant: 921896
modifier: meta s 2466 b r 0038
notes: GENE_ASSOCIATION:YDR487C
name: 3,4-dihydroxy-2-butanone-4-phosphate synthase
product: 921920
is: SBO:0000176

921908
type: SpeciesReference
stoichiometry: 1.0
species: 892482

921932
type: SpeciesReference
stoichiometry: 1.0
species: 899037

921896
type: SpeciesReference
stoichiometry: 1.0
species: 896805

921920
type: SpeciesReference
stoichiometry: 1.0
species: 898353

979864
type: Reaction
modifier: meta s 2640 b r 0804
product: 979924
reactant: 979876
name: nucleoside triphosphatase
is: SBO:0000176
reversible: true
product: 979912
notes: GENE_ASSOCIATION:YER005W
reactant: 979888
fast: false
product: 979900

979924
type: SpeciesReference
stoichiometry: 1.0
species: 904256

979876
type: SpeciesReference
stoichiometry: 1.0
species: 898941

979912
type: SpeciesReference
stoichiometry: 1.0
species: 899037

979888
type: SpeciesReference
stoichiometry: 1.0
species: 899145

979900
type: SpeciesReference
stoichiometry: 1.0
species: 898437

968030
type: Reaction
notes: GENE_ASSOCIATION:YER019W
reactant: 968054
name: IPS phospholipase C
modifier: meta s 2246 b r 0639
is: SBO:0000176
product: 968078
product: 968066
reversible: true
reactant: 968042
fast: false

968054
type: SpeciesReference
stoichiometry: 1.0
species: 899877

899877
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: inositol phosphomannosylinositol phosphoceramide B' (C26) [mitochondrion]

968078
type: SpeciesReference
stoichiometry: 1.0
species: 902229

968066
type: SpeciesReference
stoichiometry: 1.0
species: 895893

968042
type: SpeciesReference
stoichiometry: 1.0
species: 899193

932664
type: Reaction
product: 932700
reactant: 932688
modifier: meta s 2264 b r 0192
modifier: meta s 2259 b r 0192
modifier: meta s 2646 b r 0192
product: 932724
name: alpha 1,2-mannosyltransferase
fast: false
modifier: meta s 2261 b r 0192
reversible: true
modifier: meta s 2260 b r 0192
reactant: 932676
product: 932712
modifier: meta s 2263 b r 0192
modifier: meta s 2262 b r 0192
modifier: meta s 2256 b r 0192
notes: GENE_ASSOCIATION:(YBR205W or YBR199W or YDR483W or YJL139C or YKR061W or YNL029C or YOR099W or YPL053C)
is: SBO:0000176

932700
type: SpeciesReference
stoichiometry: 1.0
species: 895029

895029
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: alpha-D-mannosyl-beta-D-mannosyldiacetylchitobiosyldiphosphodolichol [Golgi]

932688
type: SpeciesReference
stoichiometry: 1.0
species: 898497

913099
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: KTR6 [Golgi]

932724
type: SpeciesReference
stoichiometry: 1.0
species: 899073

913051
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: KTR2 [Golgi]

932676
type: SpeciesReference
stoichiometry: 1.0
species: 895389

932712
type: SpeciesReference
stoichiometry: 1.0
species: 898449

913087
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: KTR5 [Golgi]

913075
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: KTR4 [Golgi]

913003
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: KRE2 [Golgi]

902265
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: mannosylinositol phosphorylceramide A (C24) [endoplasmic reticulum]

899817
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: inositol phosphomannosylinositol phosphoceramide B' (C24) [endoplasmic reticulum]

943990
type: Reaction
reactant: 944002
name: dihydroceramidase
reversible: true
notes: GENE_ASSOCIATION:YPL087W
is: SBO:0000176
product: 944026
fast: false
reactant: 944014
modifier: meta s 2624 b r 0341

944002
type: SpeciesReference
stoichiometry: 1.0
species: 896073

896073
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: cerotic acid [endoplasmic reticulum]

944026
type: SpeciesReference
stoichiometry: 1.0
species: 895725

944014
type: SpeciesReference
stoichiometry: 1.0
species: 905636

896229
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: cis-vaccenoyl-ACP [mitochondrion]

938591
type: Reaction
reactant: 938627
reactant: 938603
product: 938663
fast: false
reversible: true
reactant: 938639
is: SBO:0000176
notes: GENE_ASSOCIATION:YMR272C
modifier: meta s 2489 b r 0268
product: 938675
product: 938651
reactant: 938615
name: ceramide-3 synthase (26C)

938627
type: SpeciesReference
stoichiometry: 1.0
species: 903248

938603
type: SpeciesReference
stoichiometry: 1.0
species: 895797

895797
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ceramide-2 (C26) [endoplasmic reticulum]

938663
type: SpeciesReference
stoichiometry: 1.0
species: 899157

938639
type: SpeciesReference
stoichiometry: 1.0
species: 903860

938675
type: SpeciesReference
stoichiometry: 1.0
species: 903200

938651
type: SpeciesReference
stoichiometry: 1.0
species: 895941

938615
type: SpeciesReference
stoichiometry: 1.0
species: 899049

915043
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: POS5 [mitochondrion]

910580
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ERG7 [cytoplasm]

914683
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PHA2 [cytoplasm]

938975
type: Reaction
product: 938999
reversible: true
modifier: meta s 1980 b r 0272
product: 939011
product: 939023
fast: false
reactant: 938987
name: chitin synthase
modifier: meta s 1979 b r 0272
modifier: meta s 1978 b r 0272
notes: GENE_ASSOCIATION:(YBR023C or YBR038W or YNL192W)
is: SBO:0000176

938999
type: SpeciesReference
stoichiometry: 1.0
species: 896085

896085
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: chitin [cytoplasm]

909692
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CHS3 [cytoplasm]

939011
type: SpeciesReference
stoichiometry: 1.0
species: 899037

939023
type: SpeciesReference
stoichiometry: 1.0
species: 906464

938987
type: SpeciesReference
stoichiometry: 1.0
species: 906536

906536
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: UDP-N-acetyl-alpha-D-glucosamine [cytoplasm]

909680
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CHS2 [cytoplasm]

909668
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CHS1 [cytoplasm]

904352
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: phosphatidate [cytoplasm]

893492
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 4-(phosphonooxy)-L-threonine [cytoplasm]

892628
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 2-oxaloglutaric acid [mitochondrion]

944530
type: Reaction
product: 944578
reversible: true
product: 944566
is: SBO:0000176
notes: GENE_ASSOCIATION:YLR420W
reactant: 944554
fast: false
name: dihydroorotase
reactant: 944542
modifier: meta s 2596 b r 0349

944578
type: SpeciesReference
stoichiometry: 1.0
species: 903033

944566
type: SpeciesReference
stoichiometry: 1.0
species: 899037

944554
type: SpeciesReference
stoichiometry: 1.0
species: 899145

944542
type: SpeciesReference
stoichiometry: 1.0
species: 891384

917177
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: URA4 [cytoplasm]

944734
type: Reaction
name: dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)
is: SBO:0000176
reactant: 944746
product: 944770
product: 944758
modifier: meta s 2226 b r 0352
notes: GENE_ASSOCIATION:YJR016C
fast: false
reversible: true

944746
type: SpeciesReference
stoichiometry: 1.0
species: 890973

890973
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: (R)-2,3-dihydroxy-3-methylbutanoate [mitochondrion]

944770
type: SpeciesReference
stoichiometry: 1.0
species: 899193

944758
type: SpeciesReference
stoichiometry: 1.0
species: 893228

984495
type: Reaction
reactant: 984507
product: 984555
reversible: true
modifier: 984567
product: 984543
product: 984531
name: phosphatidylinositol phosphate phosphatase
fast: false
is: SBO:0000176
notes: GENE_ASSOCIATION:YKL212W
reactant: 984519

984507
type: SpeciesReference
stoichiometry: 1.0
species: 891974

984555
type: SpeciesReference
stoichiometry: 1.0
species: 904268

984543
type: SpeciesReference
stoichiometry: 2.0
species: 899049

984531
type: SpeciesReference
stoichiometry: 1.0
species: 891721

984519
type: SpeciesReference
stoichiometry: 1.0
species: 899157

011660
type: Reaction
modifier: meta s 2270 b r 1248
product: 011684
reactant: 011672
notes: GENE_ASSOCIATION:YNL323W
is: SBO:0000185
fast: false
reversible: true
name: phospholipid translocation

011684
type: SpeciesReference
stoichiometry: 1.0
species: 904712

011672
type: SpeciesReference
stoichiometry: 1.0
species: 904724

904724
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: phospholipid [extracellular]

007880
type: Reaction
modifier: meta s 1868 b r 1194
product: 007904
reactant: 007892
notes: GENE_ASSOCIATION:YPR021C
is: SBO:0000185
fast: false
reversible: true
name: L-glutamate transport

007904
type: SpeciesReference
stoichiometry: 1.0
species: 901125

007892
type: SpeciesReference
stoichiometry: 1.0
species: 901101

970412
type: Reaction
reactant: 970438
is: SBO:0000176
reactant: 970425
product: 970451
reversible: true
notes: GENE_ASSOCIATION:YLR089C
modifier: 970477
name: L-alanine transaminase
product: 970464
fast: false

970438
type: SpeciesReference
stoichiometry: 1.0
species: 900729

900729
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: L-alanine [mitochondrion]

970425
type: SpeciesReference
stoichiometry: 1.0
species: 892701

970451
type: SpeciesReference
stoichiometry: 1.0
species: 901125

908564
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ALT1 [mitochondrion]

970464
type: SpeciesReference
stoichiometry: 1.0
species: 905132

959379
type: Reaction
fast: false
reversible: true
product: 959415
reactant: 959391
modifier: 959427
reactant: 959403
name: glycogen phosphorylase
is: SBO:0000176
notes: GENE_ASSOCIATION:YPR160W

959415
type: SpeciesReference
stoichiometry: 1.0
species: 896709

896709
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: D-glucose 1-phosphate [cytoplasm]

959391
type: SpeciesReference
stoichiometry: 1.0
species: 898833

911504
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GPH1 [cytoplasm]

959403
type: SpeciesReference
stoichiometry: 1.0
species: 904256

916325
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: STT4 [cell envelope]

meta r 0465
type: Reaction
reactant: 955696
is described by: http://identifiers.org/pubmed/369615
product: 955732
fast: false
is: SBO:0000176
product: 955720
reversible: true
reactant: 955708
name: glucosamine-6-phosphate deaminase
notes: GENE_ASSOCIATION:

955696
type: SpeciesReference
stoichiometry: 1.0
species: 895017

955732
type: SpeciesReference
stoichiometry: 1.0
species: 896601

955720
type: SpeciesReference
stoichiometry: 1.0
species: 895089

955708
type: SpeciesReference
stoichiometry: 1.0
species: 899145

942635
type: Reaction
fast: false
reactant: 942671
name: D-sorbitol reductase
product: 942683
is: SBO:0000176
reactant: 942647
modifier: 942707
product: 942695
reversible: true
reactant: 942659
notes: GENE_ASSOCIATION:YHR104W

942671
type: SpeciesReference
stoichiometry: 1.0
species: 903236

942683
type: SpeciesReference
stoichiometry: 1.0
species: 896649

896649
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: D-glucitol [cytoplasm]

942647
type: SpeciesReference
stoichiometry: 1.0
species: 896661

942695
type: SpeciesReference
stoichiometry: 1.0
species: 903188

942659
type: SpeciesReference
stoichiometry: 1.0
species: 899037

ORG:
  orgname: University of Manchester
n:
  given: Kieran
  family: Smallbone

908324
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADO1 [cytoplasm]

951460
type: Reaction
product: 951496
modifier: 951532
notes: GENE_ASSOCIATION:(YKL182W and YPL231W)
is: SBO:0000176
reactant: 951472
product: 951508
product: 951520
reversible: true
fast: false
name: fatty-acyl-ACP hydrolase
reactant: 951484

951496
type: SpeciesReference
stoichiometry: 1.0
species: 899037

951472
type: SpeciesReference
stoichiometry: 1.0
species: 899145

951508
type: SpeciesReference
stoichiometry: 1.0
species: 903956

951520
type: SpeciesReference
stoichiometry: 1.0
species: 908060

951484
type: SpeciesReference
stoichiometry: 1.0
species: 904016

904016
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: palmitoyl-ACP [cytoplasm]

896265
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: citrate(3-) [peroxisome]

915935
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SER33 [cytoplasm]

898713
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: glycan G13046 [endoplasmic reticulum]

999249
type: Reaction
modifier: meta s 1925 b r 1068
notes: GENE_ASSOCIATION:YLR189C
product: 999309
fast: false
is: SBO:0000176
reactant: 999273
name: UDP-glucose:ergosterol glucosyltransferase
product: 999285
reactant: 999261
reversible: true
product: 999297

909032
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ATG26 [cytoplasm]

999309
type: SpeciesReference
stoichiometry: 1.0
species: 906464

999273
type: SpeciesReference
stoichiometry: 1.0
species: 906524

999285
type: SpeciesReference
stoichiometry: 1.0
species: 897789

897789
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ergosterol 3-beta-D-glucoside [cytoplasm]

999261
type: SpeciesReference
stoichiometry: 1.0
species: 897741

999297
type: SpeciesReference
stoichiometry: 1.0
species: 899037

995074
type: Reaction
fast: false
reactant: 995122
reactant: 995086
is: SBO:0000176
modifier: meta s 2695 b r 1011
notes: GENE_ASSOCIATION:(YGR175C and YHR042W)
reactant: 995098
reactant: 995110
product: 995158
product: 995146
name: squalene epoxidase (NADP)
product: 995134
reversible: true

995122
type: SpeciesReference
stoichiometry: 1.0
species: 905672

995086
type: SpeciesReference
stoichiometry: 1.0
species: 899049

918367
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: ERG1:NCP1 [endoplasmic reticulum]

995098
type: SpeciesReference
stoichiometry: 1.0
species: 903248

995110
type: SpeciesReference
stoichiometry: 1.0
species: 903860

995158
type: SpeciesReference
stoichiometry: 1.0
species: 903200

995146
type: SpeciesReference
stoichiometry: 1.0
species: 899157

995134
type: SpeciesReference
stoichiometry: 1.0
species: 891239

955060
type: Reaction
reactant: 955084
fast: false
product: 955096
reactant: 955072
product: 955108
modifier: 955120
is: SBO:0000176
notes: GENE_ASSOCIATION:YJR051W
reversible: true
name: fumarate reductase FMN

955084
type: SpeciesReference
stoichiometry: 1.0
species: 898389

955096
type: SpeciesReference
stoichiometry: 1.0
species: 898281

898281
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: FMN [mitochondrion]

955072
type: SpeciesReference
stoichiometry: 1.0
species: 898305

955108
type: SpeciesReference
stoichiometry: 1.0
species: 905768

945550
type: Reaction
fast: false
reactant: 945574
notes: GENE_ASSOCIATION:YJR057W
product: 945586
modifier: 945610
is: SBO:0000176
reactant: 945562
product: 945598
name: dTMP kinase
reversible: true

945574
type: SpeciesReference
stoichiometry: 1.0
species: 897549

897549
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: dTMP [cytoplasm]

945586
type: SpeciesReference
stoichiometry: 1.0
species: 894813

909572
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CDC8 [cytoplasm]

945562
type: SpeciesReference
stoichiometry: 1.0
species: 895269

945598
type: SpeciesReference
stoichiometry: 1.0
species: 897525

006584
type: Reaction
reversible: true
is: SBO:0000185
name: GTP/GDP translocase
product: 006644
fast: false
notes: GENE_ASSOCIATION:YDL198C
modifier: meta s 2114 b r 1175
reactant: 006620
reactant: 006608
reactant: 006596
product: 006656
product: 006632

006644
type: SpeciesReference
stoichiometry: 1.0
species: 898953

898953
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: GTP [mitochondrion]

911300
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: GGC1 [mitochondrial membrane]

006620
type: SpeciesReference
stoichiometry: 1.0
species: 899037

006608
type: SpeciesReference
stoichiometry: 1.0
species: 898941

006596
type: SpeciesReference
stoichiometry: 1.0
species: 898461

898461
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: GDP [mitochondrion]

006656
type: SpeciesReference
stoichiometry: 1.0
species: 899097

006632
type: SpeciesReference
stoichiometry: 1.0
species: 898437

993706
type: Reaction
name: sedoheptulose 1,7-bisphosphate D-glyceraldehyde-3-phosphate-lyase
fast: false
reversible: true
reactant: 993718
notes: GENE_ASSOCIATION:YKL060C
modifier: 993754
product: 993730
is: SBO:0000176
product: 993742

993718
type: SpeciesReference
stoichiometry: 1.0
species: 905420

905420
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: sedoheptulose 1,7-bisphosphate [cytoplasm]

993730
type: SpeciesReference
stoichiometry: 1.0
species: 896529

993742
type: SpeciesReference
stoichiometry: 1.0
species: 897321

899409
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: His-tRNA(His) [mitochondrion]

901305
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-histidinol [cytoplasm]

912247
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: HST4 [nucleus]

914275
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: OPI3 [mitochondrion]

994102
type: Reaction
is: SBO:0000176
reactant: 994138
reversible: true
notes: GENE_ASSOCIATION:YDR127W
name: shikimate dehydrogenase
fast: false
reactant: 994114
product: 994150
reactant: 994126
modifier: meta s 1906 b r 0996
product: 994162

994138
type: SpeciesReference
stoichiometry: 1.0
species: 903236

994114
type: SpeciesReference
stoichiometry: 1.0
species: 893001

994150
type: SpeciesReference
stoichiometry: 1.0
species: 903188

994126
type: SpeciesReference
stoichiometry: 1.0
species: 899037

994162
type: SpeciesReference
stoichiometry: 1.0
species: 905456

905456
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: shikimate [cytoplasm]

949372
type: Reaction
reversible: true
product: 949456
name: fatty acyl-CoA synthase (n-C8:0CoA), lumped reaction
product: 949468
product: 949444
product: 949432
reactant: 949408
modifier: 949492
reactant: 949384
reactant: 949420
reactant: 949396
product: 949480
fast: false
notes: GENE_ASSOCIATION:(YGR037C and YKL182W and YNR016C and YPL231W)
is: SBO:0000176

949456
type: SpeciesReference
stoichiometry: 3.0
species: 899145

949468
type: SpeciesReference
stoichiometry: 6.0
species: 903188

949444
type: SpeciesReference
stoichiometry: 3.0
species: 896313

949432
type: SpeciesReference
stoichiometry: 3.0
species: 895485

949408
type: SpeciesReference
stoichiometry: 3.0
species: 902157

949384
type: SpeciesReference
stoichiometry: 1.0
species: 894597

949420
type: SpeciesReference
stoichiometry: 6.0
species: 903236

949396
type: SpeciesReference
stoichiometry: 9.0
species: 899037

949480
type: SpeciesReference
stoichiometry: 1.0
species: 903668

903668
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: octanoyl-CoA [cytoplasm]

994534
type: Reaction
reactant: 994546
modifier: 994606
is: SBO:0000176
product: 994582
notes: GENE_ASSOCIATION:YLR146C
product: 994570
fast: false
product: 994594
name: spermine synthase
reversible: true
reactant: 994558

994546
type: SpeciesReference
stoichiometry: 1.0
species: 905348

905348
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: S-adenosylmethioninamine [cytoplasm]

916195
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SPE4 [cytoplasm]

994582
type: SpeciesReference
stoichiometry: 1.0
species: 899037

994570
type: SpeciesReference
stoichiometry: 1.0
species: 893876

994594
type: SpeciesReference
stoichiometry: 1.0
species: 905600

994558
type: SpeciesReference
stoichiometry: 1.0
species: 905564

947825
type: Reaction
product: 947933
modifier: 947945
notes: GENE_ASSOCIATION:(YGR037C and YKL182W and YNR016C and YPL231W)
reactant: 947861
reactant: 947873
reversible: true
product: 947909
product: 947897
reactant: 947837
reactant: 947849
product: 947921
name: fatty acid synthase (n-C12:0)
is: SBO:0000176
fast: false
product: 947885

947933
type: SpeciesReference
stoichiometry: 2.0
species: 903188

947861
type: SpeciesReference
stoichiometry: 1.0
species: 902157

947873
type: SpeciesReference
stoichiometry: 2.0
species: 903236

947909
type: SpeciesReference
stoichiometry: 1.0
species: 899145

947897
type: SpeciesReference
stoichiometry: 1.0
species: 896313

947837
type: SpeciesReference
stoichiometry: 1.0
species: 896997

947849
type: SpeciesReference
stoichiometry: 3.0
species: 899037

947921
type: SpeciesReference
stoichiometry: 1.0
species: 901917

947885
type: SpeciesReference
stoichiometry: 1.0
species: 895485

964670
type: Reaction
reactant: 964682
notes: GENE_ASSOCIATION:YDR072C
is: SBO:0000176
product: 964706
product: 964718
reactant: 964694
fast: false
reversible: true
modifier: meta s 2244 b r 0583
name: inositolphosphotransferase

964682
type: SpeciesReference
stoichiometry: 1.0
species: 891733

964706
type: SpeciesReference
stoichiometry: 1.0
species: 897225

964718
type: SpeciesReference
stoichiometry: 1.0
species: 899937

899937
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: inositol phosphomannosylinositol phosphoceramide C (C26) [Golgi]

964694
type: SpeciesReference
stoichiometry: 1.0
species: 902529

902529
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: mannosylinositol phosphorylceramide C (C26) [Golgi]

964730
type: Reaction
name: inositolphosphotransferase
product: 964766
fast: false
reactant: 964754
product: 964778
notes: GENE_ASSOCIATION:YDR072C
is: SBO:0000176
modifier: meta s 2244 b r 0584
reactant: 964742
reversible: true

964766
type: SpeciesReference
stoichiometry: 1.0
species: 897225

964754
type: SpeciesReference
stoichiometry: 1.0
species: 902565

902565
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: mannosylinositol phosphorylceramide D (C24) [Golgi]

964778
type: SpeciesReference
stoichiometry: 1.0
species: 899973

899973
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: inositol phosphomannosylinositol phosphoceramide D (C24) [Golgi]

964742
type: SpeciesReference
stoichiometry: 1.0
species: 891733

907796
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: PIB1:phosphatidylinositol 3-phosphate [vacuole]

893840
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5'-phosphoribosyl-5-aminoimidazole [cytoplasm]

942887
type: Reaction
product: 942935
name: dCTP deaminase
fast: false
reactant: 942923
reversible: true
is: SBO:0000176
reactant: 942899
notes: GENE_ASSOCIATION:YHR144C
modifier: 942959
reactant: 942911
product: 942947

942935
type: SpeciesReference
stoichiometry: 1.0
species: 895089

942923
type: SpeciesReference
stoichiometry: 1.0
species: 899145

942899
type: SpeciesReference
stoichiometry: 1.0
species: 896949

910004
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: DCD1 [cytoplasm]

942911
type: SpeciesReference
stoichiometry: 1.0
species: 899037

942947
type: SpeciesReference
stoichiometry: 1.0
species: 897621

894116
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5-methyltetrahydropteroyltri-L-glutamic acid [cytoplasm]

907424
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: YLR043C disulphide [mitochondrion]

982744
type: Reaction
reversible: true
name: peroxisomal acyl-CoA thioesterase
reactant: 982756
reactant: 982768
product: 982804
fast: false
product: 982780
is: SBO:0000176
modifier: meta s 2543 b r 0849
notes: GENE_ASSOCIATION:YJR019C
product: 982792

982756
type: SpeciesReference
stoichiometry: 1.0
species: 899217

982768
type: SpeciesReference
stoichiometry: 1.0
species: 905744

982804
type: SpeciesReference
stoichiometry: 1.0
species: 905696

905696
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: stearate [peroxisome]

982780
type: SpeciesReference
stoichiometry: 1.0
species: 896373

982792
type: SpeciesReference
stoichiometry: 1.0
species: 899121

meta r 1174
type: Reaction
product: 006572
reactant: 006560
notes: GENE_ASSOCIATION:
is described by: http://identifiers.org/pubmed/11486014
is: SBO:0000185
fast: false
reversible: true
name: glycogen vacuolar 'transport' via autophagy

006572
type: SpeciesReference
stoichiometry: 1.0
species: 898845

898845
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: glycogen [vacuole]

006560
type: SpeciesReference
stoichiometry: 1.0
species: 898833

912931
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: ITR2 [cell envelope]

904028
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: palmitoyl-ACP [mitochondrion]

893168
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 3-hydroxyoctadecanoyl-CoA [endoplasmic reticulum]

W3 CDTF: Wed Feb 20 10:05:10 GMT 2008

893732
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 4-methyl-2-oxopentanoate [cytoplasm]

989139
type: Reaction
reversible: true
product: 989187
is: SBO:0000176
reactant: 989163
name: protoporphyrinogen oxidase
product: 989175
reactant: 989151
modifier: 989199
fast: false
notes: GENE_ASSOCIATION:YER014W

989187
type: SpeciesReference
stoichiometry: 2.0
species: 904916

989163
type: SpeciesReference
stoichiometry: 2.0
species: 904940

989175
type: SpeciesReference
stoichiometry: 6.0
species: 899193

989151
type: SpeciesReference
stoichiometry: 3.0
species: 903872

911900
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: HEM14 [mitochondrion]

938423
type: Reaction
product: 938471
product: 938483
notes: GENE_ASSOCIATION:((YHL003C and YMR298W) or (YKL008C and YMR298W))
fast: false
is: SBO:0000176
modifier: meta s 2719 b r 0266
name: ceramide-2 synthase (26C)
modifier: meta s 2718 b r 0266
reactant: 938447
reversible: true
reactant: 938435
product: 938459

938471
type: SpeciesReference
stoichiometry: 1.0
species: 896325

938483
type: SpeciesReference
stoichiometry: 1.0
species: 899049

938447
type: SpeciesReference
stoichiometry: 1.0
species: 904760

938435
type: SpeciesReference
stoichiometry: 1.0
species: 899301

938459
type: SpeciesReference
stoichiometry: 1.0
species: 895797

894008
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5-amino-6-(D-ribitylamino)uracil [cytoplasm]

997546
type: Reaction
reactant: 997558
reversible: true
fast: false
name: threonyl-tRNA synthetase
notes: GENE_ASSOCIATION:YKL194C
reactant: 997582
is: SBO:0000176
product: 997618
reactant: 997570
product: 997606
modifier: meta s 2332 b r 1043
product: 997594

997558
type: SpeciesReference
stoichiometry: 1.0
species: 895305

997582
type: SpeciesReference
stoichiometry: 1.0
species: 907280

997618
type: SpeciesReference
stoichiometry: 1.0
species: 906092

997570
type: SpeciesReference
stoichiometry: 1.0
species: 901713

997606
type: SpeciesReference
stoichiometry: 1.0
species: 897405

913915
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: MST1 [mitochondrion]

997594
type: SpeciesReference
stoichiometry: 1.0
species: 895149

962211
type: Reaction
modifier: meta s 2308 b r 0549
reactant: 962223
fast: false
notes: GENE_ASSOCIATION:YNL277W
name: homoserine O-trans-acetylase
product: 962259
is: SBO:0000176
reactant: 962235
reversible: true
product: 962247

913627
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: MET2 [cytoplasm]

962223
type: SpeciesReference
stoichiometry: 1.0
species: 894597

962259
type: SpeciesReference
stoichiometry: 1.0
species: 903464

962235
type: SpeciesReference
stoichiometry: 1.0
species: 901341

962247
type: SpeciesReference
stoichiometry: 1.0
species: 896313

980632
type: Reaction
product: 980668
reactant: 980644
notes: GENE_ASSOCIATION:(YAL023C and YDL095W)
modifier: meta s 2733 b r 0814
reversible: true
name: O-glycosylation of proteins by PMT1:PMT2
is: SBO:0000176
reactant: 980656
fast: false

980668
type: SpeciesReference
stoichiometry: 1.0
species: 907664

907664
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: O-mannosylated protein [endoplasmic reticulum]

980644
type: SpeciesReference
stoichiometry: 1.0
species: 897489

918824
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 05
name: PMT1:PMT2 [endoplasmic reticulum membrane]

980656
type: SpeciesReference
stoichiometry: 1.0
species: 915883

915883
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: secretory protein with appropriate seryl or threonyl group [endoplasmic reticulum]

915922
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SER3 [cytoplasm]

901197
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: L-glutamine [extracellular]

979216
type: Reaction
reversible: true
product: 979252
notes: GENE_ASSOCIATION:YKL067W
reactant: 979240
reactant: 979228
product: 979264
modifier: 979276
fast: false
is: SBO:0000176
name: nucleoside diphosphate kinase

979252
type: SpeciesReference
stoichiometry: 1.0
species: 894813

979240
type: SpeciesReference
stoichiometry: 1.0
species: 895593

979228
type: SpeciesReference
stoichiometry: 1.0
species: 895269

979264
type: SpeciesReference
stoichiometry: 1.0
species: 896397

903476
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: O-acetyl-L-serine [cytoplasm]

919088
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TRR1:TRX1 [cytoplasm]

936024
type: Reaction
notes: GENE_ASSOCIATION:YGL001C
fast: false
reactant: 936048
name: C-3 sterol dehydrogenase (4-methylzymosterol)
product: 936060
product: 936072
is: SBO:0000176
product: 936084
product: 936096
reversible: true
reactant: 936036
modifier: 936108

936048
type: SpeciesReference
stoichiometry: 1.0
species: 903080

936060
type: SpeciesReference
stoichiometry: 1.0
species: 892977

936072
type: SpeciesReference
stoichiometry: 1.0
species: 895485

936084
type: SpeciesReference
stoichiometry: 1.0
species: 899037

936096
type: SpeciesReference
stoichiometry: 1.0
species: 903140

936036
type: SpeciesReference
stoichiometry: 1.0
species: 893804

910520
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ERG26 [cytoplasm]

951544
type: Reaction
name: fatty-acyl-ACP hydrolase
reversible: true
notes: GENE_ASSOCIATION:(YKL182W and YPL231W)
product: 951580
modifier: 951616
reactant: 951568
product: 951604
product: 951592
is: SBO:0000176
reactant: 951556
fast: false

951580
type: SpeciesReference
stoichiometry: 1.0
species: 899037

951568
type: SpeciesReference
stoichiometry: 1.0
species: 899145

951604
type: SpeciesReference
stoichiometry: 1.0
species: 908060

951592
type: SpeciesReference
stoichiometry: 1.0
species: 903980

951556
type: SpeciesReference
stoichiometry: 1.0
species: 896193

896193
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: cis-palmitoleoyl-ACP [cytoplasm]

924539
type: Reaction
reactant: 924551
is: SBO:0000176
product: 924587
name: 5'-nucleotidase (UMP)
notes: GENE_ASSOCIATION:YGL224C
reactant: 924563
product: 924575
modifier: meta s 2491 b r 0078
fast: false
reversible: true

924551
type: SpeciesReference
stoichiometry: 1.0
species: 899145

924587
type: SpeciesReference
stoichiometry: 1.0
species: 906680

906680
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: uridine [cytoplasm]

924563
type: SpeciesReference
stoichiometry: 1.0
species: 906548

924575
type: SpeciesReference
stoichiometry: 1.0
species: 904256

908444
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ALD2 [cytoplasm]

902673
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: myo-inositol [cell envelope]

903536
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: O-phosphoethanolamine [cytoplasm]

994174
type: Reaction
reactant: 994186
reversible: true
is: SBO:0000176
name: shikimate kinase
product: 994234
product: 994210
modifier: meta s 1906 b r 0997
product: 994222
reactant: 994198
fast: false
notes: GENE_ASSOCIATION:YDR127W

994186
type: SpeciesReference
stoichiometry: 1.0
species: 895269

994234
type: SpeciesReference
stoichiometry: 1.0
species: 899037

994210
type: SpeciesReference
stoichiometry: 1.0
species: 893456

893456
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3-phosphoshikimic acid [cytoplasm]

994222
type: SpeciesReference
stoichiometry: 1.0
species: 894813

994198
type: SpeciesReference
stoichiometry: 1.0
species: 905456

898341
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: formaldehyde [cytoplasm]

011696
type: Reaction
fast: false
modifier: meta s 2577 b r 1249
name: potassium transport
notes: GENE_ASSOCIATION:YJL129C
is: SBO:0000185
reactant: 011720
product: 011744
reversible: true
reactant: 011708
product: 011732

916949
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: TRK1 [cell envelope]

011720
type: SpeciesReference
stoichiometry: 1.0
species: 904832

904832
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: potassium [extracellular]

011744
type: SpeciesReference
stoichiometry: 1.0
species: 904820

904820
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: potassium [cytoplasm]

011708
type: SpeciesReference
stoichiometry: 1.0
species: 899061

011732
type: SpeciesReference
stoichiometry: 1.0
species: 899037

956763
type: Reaction
product: 956823
modifier: 956847
product: 956811
notes: GENE_ASSOCIATION:YGL245W
is: SBO:0000176
reversible: true
reactant: 956799
reactant: 956775
fast: false
product: 956835
reactant: 956787
name: glutamyl-tRNA synthetase

956823
type: SpeciesReference
stoichiometry: 1.0
species: 897369

911816
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GUS1 [cytoplasm]

956811
type: SpeciesReference
stoichiometry: 1.0
species: 895137

956799
type: SpeciesReference
stoichiometry: 1.0
species: 907064

956775
type: SpeciesReference
stoichiometry: 1.0
species: 895269

956835
type: SpeciesReference
stoichiometry: 1.0
species: 898545

898545
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: Glu-tRNA(Glu) [cytoplasm]

956787
type: SpeciesReference
stoichiometry: 1.0
species: 901101

911096
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FUR1 [cytoplasm]

908864
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ARO4 [cytoplasm]

923386
type: Reaction
product: 923434
name: 3-isopropylmalate dehydrogenase
reactant: 923398
fast: false
product: 923446
product: 923422
reactant: 923410
notes: GENE_ASSOCIATION:YCL018W
modifier: meta s 2272 b r 0061
reversible: true
is: SBO:0000176

923434
type: SpeciesReference
stoichiometry: 1.0
species: 899037

923398
type: SpeciesReference
stoichiometry: 1.0
species: 890888

923446
type: SpeciesReference
stoichiometry: 1.0
species: 903140

923422
type: SpeciesReference
stoichiometry: 1.0
species: 890900

923410
type: SpeciesReference
stoichiometry: 1.0
species: 903080

913195
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: LEU2 [cytoplasm]

900981
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-cystathionine [cytoplasm]

968810
type: Reaction
is: SBO:0000176
product: 968846
reactant: 968822
reversible: true
fast: false
name: IPS phospholipase C
modifier: meta s 2245 b r 0652
product: 968858
reactant: 968834
notes: GENE_ASSOCIATION:YER019W

968846
type: SpeciesReference
stoichiometry: 1.0
species: 892168

968822
type: SpeciesReference
stoichiometry: 1.0
species: 899157

968858
type: SpeciesReference
stoichiometry: 1.0
species: 895905

968834
type: SpeciesReference
stoichiometry: 1.0
species: 900249

971692
type: Reaction
is: SBO:0000176
modifier: meta s 2639 b r 0690
name: L-serine dehydrogenase
reactant: 971716
product: 971728
reactant: 971704
notes: GENE_ASSOCIATION:YMR226C
fast: false
product: 971740
product: 971752
reversible: true

971716
type: SpeciesReference
stoichiometry: 1.0
species: 903188

971728
type: SpeciesReference
stoichiometry: 1.0
species: 899037

971704
type: SpeciesReference
stoichiometry: 1.0
species: 901629

901629
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-serine [cytoplasm]

971740
type: SpeciesReference
stoichiometry: 1.0
species: 900765

971752
type: SpeciesReference
stoichiometry: 1.0
species: 903236

900309
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: inositol-P-ceramide C (C26) [mitochondrion]

000305
type: Reaction
product: 000365
is: SBO:0000176
product: 000341
notes: GENE_ASSOCIATION:YKR069W
name: uroporphyrinogen methyltransferase
modifier: 000377
reversible: true
fast: false
product: 000353
reactant: 000317
reactant: 000329

000365
type: SpeciesReference
stoichiometry: 2.0
species: 905264

000341
type: SpeciesReference
stoichiometry: 1.0
species: 899037

000353
type: SpeciesReference
stoichiometry: 1.0
species: 904844

000317
type: SpeciesReference
stoichiometry: 2.0
species: 905300

000329
type: SpeciesReference
stoichiometry: 1.0
species: 906704

997282
type: Reaction
modifier: meta s 2757 b r 1039
reactant: 997318
reversible: true
modifier: meta s 2713 b r 1039
is: SBO:0000176
fast: false
reactant: 997294
notes: GENE_ASSOCIATION:((YCR083W and YHR106W) or (YCR083W and YPL091W))
product: 997330
reactant: 997306
name: thioredoxin reductase (NADPH)
product: 997342

919112
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: TRR2:TRX3 [mitochondrion]

997318
type: SpeciesReference
stoichiometry: 1.0
species: 907424

918583
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: GLR1:TRX3 [mitochondrion]

997294
type: SpeciesReference
stoichiometry: 1.0
species: 899097

997330
type: SpeciesReference
stoichiometry: 1.0
species: 903212

997306
type: SpeciesReference
stoichiometry: 1.0
species: 903260

997342
type: SpeciesReference
stoichiometry: 1.0
species: 907376

904520
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: phosphatidylcholine [cytoplasm]

meta r 0044
type: Reaction
name: 3-hexaprenyl-4-hydroxy-5-methoxybenzoate decarboxylase
is described by: http://identifiers.org/pubmed/15792955
reversible: true
reactant: 922246
product: 922258
fast: false
reactant: 922234
notes: GENE_ASSOCIATION:
is: SBO:0000176
product: 922270

922246
type: SpeciesReference
stoichiometry: 1.0
species: 899097

922258
type: SpeciesReference
stoichiometry: 1.0
species: 892470

892470
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 2-hexaprenyl-6-methoxyphenol [mitochondrion]

922234
type: SpeciesReference
stoichiometry: 1.0
species: 893037

893037
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 3-hexaprenyl-4-hydroxy-5-methoxybenzoic acid [mitochondrion]

922270
type: SpeciesReference
stoichiometry: 1.0
species: 895521

964250
type: Reaction
reactant: 964262
fast: false
product: 964286
is: SBO:0000176
product: 964298
modifier: meta s 2244 b r 0576
reactant: 964274
notes: GENE_ASSOCIATION:YDR072C
name: inositolphosphotransferase
reversible: true

964262
type: SpeciesReference
stoichiometry: 1.0
species: 891733

964286
type: SpeciesReference
stoichiometry: 1.0
species: 897225

964298
type: SpeciesReference
stoichiometry: 1.0
species: 899685

899685
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: inositol phosphomannosylinositol phosphoceramide A (C24) [Golgi]

964274
type: SpeciesReference
stoichiometry: 1.0
species: 902277

902277
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: mannosylinositol phosphorylceramide A (C24) [Golgi]

961695
type: Reaction
reversible: true
reactant: 961707
is: SBO:0000176
reactant: 961719
name: homoacontinate hydratase
fast: false
modifier: meta s 2287 b r 0542
notes: GENE_ASSOCIATION:YDR234W
product: 961731

961707
type: SpeciesReference
stoichiometry: 1.0
species: 895461

895461
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: but-1-ene-1,2,4-tricarboxylic acid [mitochondrion]

961719
type: SpeciesReference
stoichiometry: 1.0
species: 899193

913375
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: LYS4 [mitochondrion]

961731
type: SpeciesReference
stoichiometry: 1.0
species: 899445

899445
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: homoisocitrate(3-) [mitochondrion]

910904
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: FIG4 [vacuole]

930814
type: Reaction
reactant: 930826
reactant: 930838
fast: false
reversible: true
modifier: meta s 1862 b r 0168
product: 930862
reactant: 930850
modifier: meta s 2644 b r 0168
product: 930874
name: aldehyde dehydrogenase (2-methylbutanol, NADP)
is: SBO:0000176
modifier: meta s 1863 b r 0168
notes: GENE_ASSOCIATION:(YCR105W or YDR368W or YMR318C)

930826
type: SpeciesReference
stoichiometry: 1.0
species: 892542

892542
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-methylbutanal [cytoplasm]

930838
type: SpeciesReference
stoichiometry: 1.0
species: 899037

908276
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADH6 [cytoplasm]

930862
type: SpeciesReference
stoichiometry: 1.0
species: 892567

892567
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-methylbutanol [cytoplasm]

930850
type: SpeciesReference
stoichiometry: 1.0
species: 903236

930874
type: SpeciesReference
stoichiometry: 1.0
species: 903188

908288
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ADH7 [cytoplasm]

989931
type: Reaction
reactant: 989967
reactant: 989979
notes: GENE_ASSOCIATION:YBR035C
reversible: true
product: 990003
name: pyridoxal oxidase
reactant: 989943
fast: false
modifier: 990015
reactant: 989955
is: SBO:0000176
product: 989991

989967
type: SpeciesReference
stoichiometry: 0.5
species: 903848

989979
type: SpeciesReference
stoichiometry: 1.0
species: 905024

905024
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: pyridoxal [cytoplasm]

990003
type: SpeciesReference
stoichiometry: 1.0
species: 905048

905048
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: pyridoxamine [cytoplasm]

989943
type: SpeciesReference
stoichiometry: 1.0
species: 895089

989955
type: SpeciesReference
stoichiometry: 2.0
species: 899145

989991
type: SpeciesReference
stoichiometry: 2.0
species: 899457

983752
type: Reaction
product: 983799
is: SBO:0000176
product: 983811
name: phosphatidylinositol 4,5-bisphosphate 5-phosphatase
reversible: true
reactant: 983775
modifier: meta s 2239 b r 0863
fast: false
notes: GENE_ASSOCIATION:(YIL002C or YNL106C or YOR109W)
modifier: meta s 2237 b r 0863
modifier: meta s 2235 b r 0863
product: 983787
reactant: 983763

983799
type: SpeciesReference
stoichiometry: 2.0
species: 899025

983811
type: SpeciesReference
stoichiometry: 1.0
species: 904256

983775
type: SpeciesReference
stoichiometry: 1.0
species: 899145

912751
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: INP51 [cell envelope]

983787
type: SpeciesReference
stoichiometry: 1.0
species: 891950

891950
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: 1-phosphatidyl-1D-myo-inositol 4-phosphate [cell envelope]

983763
type: SpeciesReference
stoichiometry: 1.0
species: 891902

891902
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [cell envelope]

965750
type: Reaction
reactant: 965762
product: 965798
is: SBO:0000176
product: 965786
name: IPS phospholipase C
reversible: true
modifier: meta s 2245 b r 0601
reactant: 965774
fast: false
notes: GENE_ASSOCIATION:YER019W

965762
type: SpeciesReference
stoichiometry: 1.0
species: 899157

965798
type: SpeciesReference
stoichiometry: 1.0
species: 902241

965786
type: SpeciesReference
stoichiometry: 1.0
species: 895797

965774
type: SpeciesReference
stoichiometry: 1.0
species: 902373

902373
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: mannosylinositol phosphorylceramide B (C26) [endoplasmic reticulum]

939647
type: Reaction
name: cis-prenyltransferase step 03
fast: false
reversible: true
notes: GENE_ASSOCIATION:(YBR002C or YMR101C)
product: 939683
reactant: 939671
modifier: meta s 2462 b r 0283
reactant: 939659
modifier: meta s 2521 b r 0283
product: 939695
is: SBO:0000176

939683
type: SpeciesReference
stoichiometry: 1.0
species: 897393

939671
type: SpeciesReference
stoichiometry: 1.0
species: 904148

939659
type: SpeciesReference
stoichiometry: 1.0
species: 900597

939695
type: SpeciesReference
stoichiometry: 1.0
species: 899373

899373
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: hexaprenyl diphosphate [lipid particle]

911132
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GAL1 [cytoplasm]

903572
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: octadec-9-ynoyl-ACP [cytoplasm]

924275
type: Reaction
is: SBO:0000176
reactant: 924299
modifier: meta s 2254 b r 0074
product: 924347
product: 924335
fast: false
notes: GENE_ASSOCIATION:YDR017C
reactant: 924311
name: 4PP-IP5 pyrophosphorylation to 4,5-PP2-IP4
reversible: true
reactant: 924287
product: 924323

924299
type: SpeciesReference
stoichiometry: 1.0
species: 895269

924347
type: SpeciesReference
stoichiometry: 1.0
species: 899145

924335
type: SpeciesReference
stoichiometry: 1.0
species: 894813

924311
type: SpeciesReference
stoichiometry: 2.0
species: 899037

924287
type: SpeciesReference
stoichiometry: 1.0
species: 893612

924323
type: SpeciesReference
stoichiometry: 1.0
species: 893480

910880
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: FEN2 [cell envelope]

915235
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: protein with N-terminal(Met-Trp) [cytoplasm]

001133
type: Reaction
notes: GENE_ASSOCIATION:YHR104W
product: 001193
reversible: true
modifier: 001205
product: 001181
name: xylose reductase
reactant: 001157
reactant: 001145
fast: false
reactant: 001169
is: SBO:0000176

001193
type: SpeciesReference
stoichiometry: 1.0
species: 906788

906788
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: xylitol [cytoplasm]

001181
type: SpeciesReference
stoichiometry: 1.0
species: 903188

001157
type: SpeciesReference
stoichiometry: 1.0
species: 899037

001145
type: SpeciesReference
stoichiometry: 1.0
species: 896817

896817
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: D-xylose [cytoplasm]

001169
type: SpeciesReference
stoichiometry: 1.0
species: 903236

910208
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 05
name: DPM1 [endoplasmic reticulum membrane]

915740
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: SAC1 [mitochondrion]

907808
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: SWH1:oxysterol [cytoplasm]

909836
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: CTA1 [peroxisome]

963638
type: Reaction
modifier: meta s 1907 b r 0567
reactant: 963650
modifier: meta s 2375 b r 0567
notes: GENE_ASSOCIATION:(YDR380W or YGR087C or YLR044C or YLR134W)
reversible: true
fast: false
product: 963686
product: 963674
name: indole-3-pyruvate decarboxylase
reactant: 963662
modifier: meta s 2374 b r 0567
modifier: meta s 2373 b r 0567
is: SBO:0000176

908816
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ARO10 [cytoplasm]

963650
type: SpeciesReference
stoichiometry: 1.0
species: 899037

963686
type: SpeciesReference
stoichiometry: 1.0
species: 899601

963674
type: SpeciesReference
stoichiometry: 1.0
species: 895485

963662
type: SpeciesReference
stoichiometry: 1.0
species: 899649

899649
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: indole-3-pyruvate [cytoplasm]

912907
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ISN1 [cytoplasm]

914287
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: OPT1 [cell envelope]

968510
type: Reaction
notes: GENE_ASSOCIATION:YER019W
reversible: true
reactant: 968534
product: 968558
is: SBO:0000176
product: 968546
name: IPS phospholipase C
reactant: 968522
fast: false
modifier: meta s 2245 b r 0647

968534
type: SpeciesReference
stoichiometry: 1.0
species: 900069

900069
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: inositol-P-ceramide A (C26) [endoplasmic reticulum]

968558
type: SpeciesReference
stoichiometry: 1.0
species: 895725

968546
type: SpeciesReference
stoichiometry: 1.0
species: 892168

968522
type: SpeciesReference
stoichiometry: 1.0
species: 899157

974729
type: Reaction
product: 974753
name: methylisocitrate lyase
product: 974765
reactant: 974741
is: SBO:0000176
modifier: meta s 2218 b r 0734
reversible: true
fast: false
notes: GENE_ASSOCIATION:YPR006C

974753
type: SpeciesReference
stoichiometry: 1.0
species: 905132

974765
type: SpeciesReference
stoichiometry: 1.0
species: 905768

974741
type: SpeciesReference
stoichiometry: 1.0
species: 890925

912547
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ICL2 [mitochondrion]

984183
type: Reaction
product: 984231
is: SBO:0000176
name: phosphatidylinositol phosphate phosphatase
notes: GENE_ASSOCIATION:YKL212W
reactant: 984195
reversible: true
fast: false
modifier: meta s 2483 b r 0869
product: 984243
product: 984219
reactant: 984207

984231
type: SpeciesReference
stoichiometry: 2.0
species: 899097

984195
type: SpeciesReference
stoichiometry: 1.0
species: 891818

984243
type: SpeciesReference
stoichiometry: 1.0
species: 904304

984219
type: SpeciesReference
stoichiometry: 1.0
species: 891878

891878
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 1-phosphatidyl-1D-myo-inositol 3-phosphate [mitochondrion]

984207
type: SpeciesReference
stoichiometry: 1.0
species: 899193

944830
type: Reaction
reactant: 944854
fast: false
reactant: 944842
name: dihydroxyacetone kinase
is: SBO:0000176
product: 944890
notes: GENE_ASSOCIATION:(YFL053W or YML070W)
modifier: 944902
reversible: true
modifier: 944914
product: 944866
product: 944878

944854
type: SpeciesReference
stoichiometry: 1.0
species: 898809

944842
type: SpeciesReference
stoichiometry: 1.0
species: 895269

944890
type: SpeciesReference
stoichiometry: 1.0
species: 899037

909908
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: DAK1 [cytoplasm]

944866
type: SpeciesReference
stoichiometry: 1.0
species: 894813

944878
type: SpeciesReference
stoichiometry: 1.0
species: 897321

944134
type: Reaction
fast: false
product: 944182
notes: GENE_ASSOCIATION:YOR236W
reversible: true
product: 944194
reactant: 944170
reactant: 944158
modifier: 944206
reactant: 944146
is: SBO:0000176
name: dihydrofolate reductase

944182
type: SpeciesReference
stoichiometry: 1.0
species: 903188

944194
type: SpeciesReference
stoichiometry: 1.0
species: 906032

906032
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: THF [cytoplasm]

944170
type: SpeciesReference
stoichiometry: 1.0
species: 903236

944158
type: SpeciesReference
stoichiometry: 1.0
species: 899037

910052
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: DFR1 [cytoplasm]

944146
type: SpeciesReference
stoichiometry: 1.0
species: 897273

903380
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: NMN [cytoplasm]

900177
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: inositol-P-ceramide B' (C24) [endoplasmic reticulum]

891045
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: (R)-carnitine [extracellular]

917009
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TRR1 [cytoplasm]

910940
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FMN1 [cytoplasm]

940079
type: Reaction
reactant: 940103
modifier: meta s 2462 b r 0290
reversible: true
product: 940127
modifier: meta s 2521 b r 0290
name: cis-prenyltransferase step 10
notes: GENE_ASSOCIATION:(YBR002C or YMR101C)
fast: false
reactant: 940091
product: 940115
is: SBO:0000176

940103
type: SpeciesReference
stoichiometry: 1.0
species: 900597

940127
type: SpeciesReference
stoichiometry: 1.0
species: 906308

906308
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: tridecaprenyl diphosphate [lipid particle]

940091
type: SpeciesReference
stoichiometry: 1.0
species: 897465

940115
type: SpeciesReference
stoichiometry: 1.0
species: 897393

911216
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GDB1 [cytoplasm]

991166
type: Reaction
fast: false
modifier: 991238
product: 991202
reactant: 991178
reactant: 991190
product: 991214
reversible: true
name: riboflavin synthase
notes: GENE_ASSOCIATION:YOL143C
is: SBO:0000176
product: 991226

915535
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: RIB4 [cytoplasm]

991202
type: SpeciesReference
stoichiometry: 1.0
species: 894176

894176
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 6,7-dimethyl-8-(1-D-ribityl)lumazine [cytoplasm]

991178
type: SpeciesReference
stoichiometry: 1.0
species: 892482

991190
type: SpeciesReference
stoichiometry: 1.0
species: 894008

991214
type: SpeciesReference
stoichiometry: 2.0
species: 899145

991226
type: SpeciesReference
stoichiometry: 1.0
species: 904256

962391
type: Reaction
modifier: meta s 2652 b r 0552
product: 962439
reactant: 962403
notes: GENE_ASSOCIATION:((YGR209C and YLR109W) or (YLR043C and YLR109W))
name: hydrogen peroxide reductase (thioredoxin)
reactant: 962415
is: SBO:0000176
fast: false
reversible: true
modifier: meta s 2651 b r 0552
product: 962427

917850
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: AHP1:TRX2 [peroxisome]

962439
type: SpeciesReference
stoichiometry: 1.0
species: 907448

907448
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: YLR043C disulphide [peroxisome]

962403
type: SpeciesReference
stoichiometry: 1.0
species: 899493

962415
type: SpeciesReference
stoichiometry: 1.0
species: 907400

907400
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: TRX1 [peroxisome]

917838
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: AHP1:TRX1 [peroxisome]

962427
type: SpeciesReference
stoichiometry: 2.0
species: 899217

920214
type: Reaction
modifier: meta s 2469 b r 0015
name: 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase (NADPH)
reactant: 920239
reactant: 920251
reactant: 920227
product: 920263
product: 920276
reversible: true
fast: false
notes: GENE_ASSOCIATION:YBR153W
is: SBO:0000176

920239
type: SpeciesReference
stoichiometry: 1.0
species: 899037

920251
type: SpeciesReference
stoichiometry: 1.0
species: 903236

920227
type: SpeciesReference
stoichiometry: 1.0
species: 892277

892277
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2,5-diamino-4-hydroxy-6-(5-phosphoribosylamino)pyrimidine [cytoplasm]

920263
type: SpeciesReference
stoichiometry: 1.0
species: 892289

892289
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2,5-diamino-6-(5-phosphono)ribitylamino-4(3H)-pyrimidinone [cytoplasm]

920276
type: SpeciesReference
stoichiometry: 1.0
species: 903188

891661
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 1-acylglycerophosphocholine [mitochondrion]

918788
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: PMA1:PMP1:PMP2 [cell envelope]

904544
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: phosphatidylcholine [Golgi]

893852
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5'-phosphoribosyl-N-formylglycineamide [cytoplasm]

913243
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: LEU9 [cytoplasm]

960327
type: Reaction
modifier: 960411
reactant: 960339
is: SBO:0000176
product: 960363
reversible: true
product: 960375
name: GTP cyclohydrolase II
fast: false
reactant: 960351
notes: GENE_ASSOCIATION:YBL033C
product: 960387
product: 960399

960339
type: SpeciesReference
stoichiometry: 1.0
species: 898941

960363
type: SpeciesReference
stoichiometry: 1.0
species: 892277

960375
type: SpeciesReference
stoichiometry: 1.0
species: 897369

960351
type: SpeciesReference
stoichiometry: 3.0
species: 899145

960387
type: SpeciesReference
stoichiometry: 1.0
species: 898353

960399
type: SpeciesReference
stoichiometry: 2.0
species: 899037

907844
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: AAC1 [mitochondrial membrane]

915331
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: PUT1 [mitochondrion]

898317
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: folic acid [cytoplasm]

993428
type: Reaction
reactant: 993452
product: 993488
name: S-formylglutathione hydralase
product: 993464
product: 993476
fast: false
notes: GENE_ASSOCIATION:YJL068C
reversible: true
reactant: 993440
modifier: 993500
is: SBO:0000176

993452
type: SpeciesReference
stoichiometry: 1.0
species: 905360

905360
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: S-formylglutathione [cytoplasm]

993488
type: SpeciesReference
stoichiometry: 1.0
species: 899037

993464
type: SpeciesReference
stoichiometry: 1.0
species: 898353

993476
type: SpeciesReference
stoichiometry: 1.0
species: 898569

993440
type: SpeciesReference
stoichiometry: 1.0
species: 899145

917658
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: YJL068C [cytoplasm]

008840
type: Reaction
modifier: meta s 1924 b r 1208
product: 008864
reactant: 008852
notes: GENE_ASSOCIATION:YCL038C
is: SBO:0000185
fast: false
reversible: true
name: L-leucine transport

008864
type: SpeciesReference
stoichiometry: 1.0
species: 901413

008852
type: SpeciesReference
stoichiometry: 1.0
species: 901449

901449
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: L-leucine [vacuole]

897957
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FAD [cytoplasm]

917610
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: YGR012W [cytoplasm]

900213
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: inositol-P-ceramide B' (C26) [endoplasmic reticulum]

894140
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 5-phospho-ribosyl-glycineamide [cytoplasm]

909764
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: COQ2 [mitochondrion]

903656
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: octanoyl-ACP [mitochondrion]

923602
type: Reaction
reactant: 923626
is: SBO:0000176
name: 3-methyl-2-oxopentanoate decarboxylase
product: 923638
product: 923650
modifier: meta s 2374 b r 0064
modifier: meta s 1907 b r 0064
modifier: meta s 2552 b r 0064
modifier: meta s 2375 b r 0064
notes: GENE_ASSOCIATION:(YDL080C or YDR380W or YGR087C or YLR044C or YLR134W)
fast: false
reactant: 923614
modifier: meta s 2373 b r 0064
reversible: true

923626
type: SpeciesReference
stoichiometry: 1.0
species: 899037

923638
type: SpeciesReference
stoichiometry: 1.0
species: 892542

923650
type: SpeciesReference
stoichiometry: 1.0
species: 895485

916637
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: THI3 [cytoplasm]

923614
type: SpeciesReference
stoichiometry: 1.0
species: 891359

985839
type: Reaction
modifier: meta s 2137 b r 0893
product: 985863
reactant: 985851
notes: GENE_ASSOCIATION:YKL152C
is: SBO:0000176
fast: false
reversible: true
name: phosphoglycerate mutase

985863
type: SpeciesReference
stoichiometry: 1.0
species: 892761

892761
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-phospho-D-glyceric acid [cytoplasm]

985851
type: SpeciesReference
stoichiometry: 1.0
species: 893444

893444
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3-phosphoglycerate [cytoplasm]

991634
type: Reaction
reactant: 991658
is: SBO:0000176
name: ribonucleoside-triphosphate reductase (UTP)
fast: false
modifier: 991706
notes: GENE_ASSOCIATION:YGR209C
reactant: 991646
product: 991682
reversible: true
product: 991694
product: 991670

991658
type: SpeciesReference
stoichiometry: 1.0
species: 907364

917021
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TRX2 [cytoplasm]

991646
type: SpeciesReference
stoichiometry: 1.0
species: 906716

991682
type: SpeciesReference
stoichiometry: 1.0
species: 899145

991694
type: SpeciesReference
stoichiometry: 1.0
species: 907412

991670
type: SpeciesReference
stoichiometry: 1.0
species: 897621

998206
type: Reaction
modifier: meta s 2547 b r 1053
reactant: 998230
is: SBO:0000176
name: triacylglycerol lipase
modifier: meta s 2546 b r 1053
reversible: true
product: 998242
notes: GENE_ASSOCIATION:(YKR089C or YMR313C or YOR081C)
fast: false
product: 998254
reactant: 998218
modifier: meta s 2548 b r 1053

916572
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: TGL4 [lipid particle]

998230
type: SpeciesReference
stoichiometry: 1.0
species: 898077

998242
type: SpeciesReference
stoichiometry: 1.0
species: 899145

998254
type: SpeciesReference
stoichiometry: 1.0
species: 906332

906332
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: triglyceride [lipid particle]

998218
type: SpeciesReference
stoichiometry: 1.0
species: 897237

897237
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: diglyceride [lipid particle]

916546
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: TGL2 [cytoplasm]

941975
type: Reaction
is: SBO:0000176
reactant: 942011
reversible: true
notes: GENE_ASSOCIATION:((YHR007C and YIL043C and YNL111C) or (YHR007C and YKL150W and YNL111C))
modifier: meta s 2676 b r 0316
reactant: 941999
name: cytochrome P450 lanosterol 14-alpha-demethylase (NAD)
modifier: meta s 2660 b r 0316
product: 942059
product: 942071
product: 942047
fast: false
reactant: 942023
product: 942035
reactant: 941987

942011
type: SpeciesReference
stoichiometry: 3.0
species: 903140

918138
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CYB5:ERG11:MCR1 [cytoplasm]

941999
type: SpeciesReference
stoichiometry: 1.0
species: 901857

901857
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: lanosterol [cytoplasm]

942059
type: SpeciesReference
stoichiometry: 4.0
species: 899145

942071
type: SpeciesReference
stoichiometry: 3.0
species: 903080

942047
type: SpeciesReference
stoichiometry: 1.0
species: 898353

942023
type: SpeciesReference
stoichiometry: 3.0
species: 903848

942035
type: SpeciesReference
stoichiometry: 1.0
species: 893468

941987
type: SpeciesReference
stoichiometry: 2.0
species: 899037

901941
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: lauroyl-ACP [cytoplasm]

891552
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate [cytoplasm]

975569
type: Reaction
name: microsomal beta-keto-reductase
reactant: 975593
fast: false
reactant: 975581
product: 975617
product: 975629
modifier: meta s 2223 b r 0745
notes: GENE_ASSOCIATION:YBR159W
reversible: true
product: 975605
is: SBO:0000176

975593
type: SpeciesReference
stoichiometry: 1.0
species: 903200

975581
type: SpeciesReference
stoichiometry: 1.0
species: 893168

975617
type: SpeciesReference
stoichiometry: 1.0
species: 899049

975629
type: SpeciesReference
stoichiometry: 1.0
species: 903248

975605
type: SpeciesReference
stoichiometry: 1.0
species: 893336

893336
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: 3-oxooctadecanoyl-CoA [endoplasmic reticulum]

971571
type: Reaction
reactant: 971596
fast: false
notes: GENE_ASSOCIATION:(YHR104W or YOL151W)
reactant: 971608
product: 971620
product: 971632
reactant: 971583
modifier: meta s 2143 b r 0688
reversible: true
modifier: meta s 2142 b r 0688
name: L-lactaldehyde:NADP+ 1-oxidoreductase
is: SBO:0000176

971596
type: SpeciesReference
stoichiometry: 1.0
species: 902661

971608
type: SpeciesReference
stoichiometry: 1.0
species: 903236

971620
type: SpeciesReference
stoichiometry: 1.0
species: 891396

971632
type: SpeciesReference
stoichiometry: 1.0
species: 903188

971583
type: SpeciesReference
stoichiometry: 1.0
species: 899037

911636
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: GRE2 [cytoplasm]

910112
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: DIE2 [endoplasmic reticulum]

893025
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 3-hexaprenyl-4,5-dihydroxybenzoic acid [mitochondrion]

914191
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: NTE1 [endoplasmic reticulum]

918884
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 14
name: PXA1:PXA2 [peroxisomal membrane]

894032
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: 5-aminolevulinate [extracellular]

004505
type: Reaction
modifier: meta s 2018 b r 1141
name: DNF1 flippase
product: 004529
reversible: true
fast: false
notes: GENE_ASSOCIATION:(YDR093W or YER166W)
is: SBO:0000185
modifier: meta s 2019 b r 1141
reactant: 004517

004529
type: SpeciesReference
stoichiometry: 1.0
species: 904400

904400
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: phosphatidyl-L-serine [cell envelope]

910160
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: DNF2 [cell envelope]

004517
type: SpeciesReference
stoichiometry: 1.0
species: 904412

909656
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: CHO2 [endoplasmic reticulum]

912200
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HPT1 [cytoplasm]

009620
type: Reaction
product: 009668
reactant: 009632
is: SBO:0000185
notes: GENE_ASSOCIATION:(YCL025C or YDR508C or YFL055W or YKR039W or YPL265W)
product: 009656
fast: false
modifier: 009716
reversible: true
modifier: 009728
modifier: 009704
modifier: 009692
modifier: 009680
name: L-serine transport
reactant: 009644

009668
type: SpeciesReference
stoichiometry: 1.0
species: 901629

009632
type: SpeciesReference
stoichiometry: 1.0
species: 899061

009656
type: SpeciesReference
stoichiometry: 1.0
species: 899037

911456
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: GNP1 [cell envelope]

009644
type: SpeciesReference
stoichiometry: 1.0
species: 901653

901653
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: L-serine [extracellular]

985671
type: Reaction
modifier: meta s 2371 b r 0890
product: 985695
reactant: 985683
notes: GENE_ASSOCIATION:YEL058W
is: SBO:0000176
fast: false
reversible: true
name: phosphoglucosamine mutase

914383
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PCM1 [cytoplasm]

985695
type: SpeciesReference
stoichiometry: 1.0
species: 895017

985683
type: SpeciesReference
stoichiometry: 1.0
species: 895005

898269
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: FMN [extracellular]

009536
type: Reaction
name: L-proline transport
product: 009572
modifier: 009596
notes: GENE_ASSOCIATION:(YKR039W or YOR348C)
is: SBO:0000185
modifier: 009608
reactant: 009560
fast: false
reversible: true
reactant: 009548
product: 009584

009572
type: SpeciesReference
stoichiometry: 1.0
species: 899037

915355
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: PUT4 [cell envelope]

009560
type: SpeciesReference
stoichiometry: 1.0
species: 901593

901593
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: L-proline [extracellular]

009548
type: SpeciesReference
stoichiometry: 1.0
species: 899061

009584
type: SpeciesReference
stoichiometry: 1.0
species: 901581

901581
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-proline [cytoplasm]

920140
type: Reaction
notes: GENE_ASSOCIATION:YOL066C
reactant: 920152
product: 920201
is: SBO:0000176
reactant: 920164
modifier: meta s 2465 b r 0014
fast: false
reactant: 920176
reversible: true
name: 2,5-diamino-6-ribitylamino-4(3H)-pyrimidinone 5'-phosphate deaminase
product: 920188

920152
type: SpeciesReference
stoichiometry: 1.0
species: 892289

920201
type: SpeciesReference
stoichiometry: 1.0
species: 895089

920164
type: SpeciesReference
stoichiometry: 1.0
species: 899037

920176
type: SpeciesReference
stoichiometry: 1.0
species: 899145

920188
type: SpeciesReference
stoichiometry: 1.0
species: 893996

892857
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 3',5'-cyclic IMP [cytoplasm]

991550
type: Reaction
reversible: true
product: 991610
is: SBO:0000176
fast: false
modifier: 991622
reactant: 991562
name: ribonucleoside-triphosphate reductase (GTP)
product: 991586
notes: GENE_ASSOCIATION:YGR209C
reactant: 991574
product: 991598

991610
type: SpeciesReference
stoichiometry: 1.0
species: 907412

991562
type: SpeciesReference
stoichiometry: 1.0
species: 898941

991586
type: SpeciesReference
stoichiometry: 1.0
species: 897177

991574
type: SpeciesReference
stoichiometry: 1.0
species: 907364

991598
type: SpeciesReference
stoichiometry: 1.0
species: 899145

meta r 0827
type: Reaction
is described by: http://identifiers.org/pubmed/17434796
is: SBO:0000176
fast: false
notes: GENE_ASSOCIATION:
name: OSH3 endoplasmic reticulum to cytoplasm
reversible: true
product: 981400
reactant: 981376
reactant: 981388

981400
type: SpeciesReference
stoichiometry: 1.0
species: 907688

907688
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: OSH3:oxysterol [cytoplasm]

981376
type: SpeciesReference
stoichiometry: 1.0
species: 903908

981388
type: SpeciesReference
stoichiometry: 1.0
species: 914323

914323
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: OSH3 [cytoplasm]

968930
type: Reaction
is: SBO:0000176
modifier: meta s 2245 b r 0654
product: 968978
product: 968966
reactant: 968942
notes: GENE_ASSOCIATION:YER019W
reversible: true
reactant: 968954
fast: false
name: IPS phospholipase C

968978
type: SpeciesReference
stoichiometry: 1.0
species: 895977

968966
type: SpeciesReference
stoichiometry: 1.0
species: 892168

968942
type: SpeciesReference
stoichiometry: 1.0
species: 899157

968954
type: SpeciesReference
stoichiometry: 1.0
species: 900321

900321
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: inositol-P-ceramide D (C24) [endoplasmic reticulum]

932916
type: Reaction
product: 932952
notes: GENE_ASSOCIATION:YGR227W
modifier: meta s 2015 b r 0196
reactant: 932928
name: alpha-1,2 glucosyltransferase
is: SBO:0000176
reactant: 932940
fast: false
reversible: true

932952
type: SpeciesReference
stoichiometry: 1.0
species: 898665

932928
type: SpeciesReference
stoichiometry: 1.0
species: 896673

896673
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: D-glucose [endoplasmic reticulum]

932940
type: SpeciesReference
stoichiometry: 1.0
species: 898689

917634
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: YHR020W [cytoplasm]

926363
type: Reaction
reversible: true
is: SBO:0000176
name: acetyl-CoA C-acetyltransferase
reactant: 926375
product: 926399
product: 926387
notes: GENE_ASSOCIATION:YPL028W
modifier: 926411
fast: false

926375
type: SpeciesReference
stoichiometry: 2.0
species: 894609

926399
type: SpeciesReference
stoichiometry: 1.0
species: 896349

926387
type: SpeciesReference
stoichiometry: 1.0
species: 894560

894560
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: acetoacetyl-CoA [mitochondrion]

910424
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ERG10 [mitochondrion]

989499
type: Reaction
product: 989547
reactant: 989511
notes: GENE_ASSOCIATION:YLR209C
product: 989535
is: SBO:0000176
modifier: 989559
reversible: true
name: purine-nucleoside phosphorylase (deoxyguanosine)
reactant: 989523
fast: false

989547
type: SpeciesReference
stoichiometry: 1.0
species: 898965

989511
type: SpeciesReference
stoichiometry: 1.0
species: 892228

892228
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2'-deoxyguanosine [cytoplasm]

989535
type: SpeciesReference
stoichiometry: 1.0
species: 892398

892398
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 2-deoxy-D-ribofuranose 1-phosphate [cytoplasm]

989523
type: SpeciesReference
stoichiometry: 1.0
species: 904256

915415
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: QNS1 [cytoplasm]

904532
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: phosphatidylcholine [endoplasmic reticulum]

901113
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: L-glutamate [extracellular]

944218
type: Reaction
product: 944278
product: 944266
modifier: 944290
reactant: 944242
notes: GENE_ASSOCIATION:YOR236W
fast: false
is: SBO:0000176
reactant: 944254
reactant: 944230
reversible: true
name: dihydrofolate reductase

944278
type: SpeciesReference
stoichiometry: 1.0
species: 906044

944266
type: SpeciesReference
stoichiometry: 1.0
species: 903212

910064
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: DFR1 [mitochondrion]

944242
type: SpeciesReference
stoichiometry: 1.0
species: 899097

944254
type: SpeciesReference
stoichiometry: 1.0
species: 903260

944230
type: SpeciesReference
stoichiometry: 1.0
species: 897285

897285
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: dihydrofolic acid [mitochondrion]

891166
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: (R)-pantothenate [extracellular]

893061
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 3-hexaprenyl-4-hydroxybenzoic acid [mitochondrion]

930262
type: Reaction
name: alcohol acetyltransferase (isoamyl alcohol)
fast: false
modifier: meta s 1923 b r 0160
product: 930310
reversible: true
reactant: 930274
reactant: 930286
is: SBO:0000176
modifier: meta s 1922 b r 0160
product: 930298
notes: GENE_ASSOCIATION:(YGR177C or YOR377W)

909008
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ATF2 [cytoplasm]

930310
type: SpeciesReference
stoichiometry: 1.0
species: 900429

930274
type: SpeciesReference
stoichiometry: 1.0
species: 894597

930286
type: SpeciesReference
stoichiometry: 1.0
species: 900453

908996
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ATF1 [cytoplasm]

930298
type: SpeciesReference
stoichiometry: 1.0
species: 896313

913303
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 17
name: LSB6 [vacuole]

007112
type: Reaction
product: 007148
product: 007160
modifier: 007184
modifier: 007172
reactant: 007136
fast: false
modifier: 007196
reversible: true
is: SBO:0000185
reactant: 007124
notes: GENE_ASSOCIATION:(YEL063C or YKR039W or YNL270C)
name: L-arganine transport

007148
type: SpeciesReference
stoichiometry: 1.0
species: 899037

007160
type: SpeciesReference
stoichiometry: 1.0
species: 900801

908552
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: ALP1 [cell envelope]

007136
type: SpeciesReference
stoichiometry: 1.0
species: 900813

900813
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: L-arginine [extracellular]

007124
type: SpeciesReference
stoichiometry: 1.0
species: 899061

926303
type: Reaction
name: acetyl-CoA C-acetyltransferase
is: SBO:0000176
reactant: 926315
reversible: true
notes: GENE_ASSOCIATION:YPL028W
modifier: 926351
product: 926339
product: 926327
fast: false

926315
type: SpeciesReference
stoichiometry: 2.0
species: 894597

910412
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ERG10 [cytoplasm]

926339
type: SpeciesReference
stoichiometry: 1.0
species: 896313

926327
type: SpeciesReference
stoichiometry: 1.0
species: 894548

894548
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: acetoacetyl-CoA [cytoplasm]

891637
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: 1-acylglycerophosphocholine [cell envelope]

961215
type: Reaction
notes: GENE_ASSOCIATION:YCL030C
reactant: 961239
is: SBO:0000176
reactant: 961227
fast: false
modifier: 961299
reactant: 961251
name: histidinol dehydrogenase
reversible: true
product: 961287
product: 961263
product: 961275

961239
type: SpeciesReference
stoichiometry: 1.0
species: 901305

961227
type: SpeciesReference
stoichiometry: 1.0
species: 899145

912044
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HIS4 [cytoplasm]

961251
type: SpeciesReference
stoichiometry: 2.0
species: 903080

961287
type: SpeciesReference
stoichiometry: 2.0
species: 903140

961263
type: SpeciesReference
stoichiometry: 3.0
species: 899037

961275
type: SpeciesReference
stoichiometry: 1.0
species: 901257

897861
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: erythro-4-hydroxy-L-glutamic acid [mitochondrion]

917298
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 16
name: VAC8 [vacuolar membrane]

913219
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: LEU4 [mitochondrion]

939707
type: Reaction
product: 939767
reactant: 939743
name: cis-prenyltransferase step 04
reactant: 939719
modifier: meta s 2462 b r 0284
fast: false
product: 939755
notes: GENE_ASSOCIATION:(YBR002C or YMR101C)
reversible: true
reactant: 939731
modifier: meta s 2521 b r 0284
is: SBO:0000176

939767
type: SpeciesReference
stoichiometry: 1.0
species: 899289

939743
type: SpeciesReference
stoichiometry: 1.0
species: 900597

939719
type: SpeciesReference
stoichiometry: 3.0
species: 899085

939755
type: SpeciesReference
stoichiometry: 1.0
species: 897393

939731
type: SpeciesReference
stoichiometry: 1.0
species: 899373

912152
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: HOM2 [cytoplasm]

899313
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 15
name: hexacosanoyl-CoA [peroxisome]

896493
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: D-arabinono-1,4-lactone [cytoplasm]

893528
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 4-amino-4-deoxychorismate(2-) [cytoplasm]

915307
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: PUS2 [cytoplasm]

967130
type: Reaction
product: 967178
reversible: true
modifier: meta s 2246 b r 0624
product: 967166
name: IPS phospholipase C
fast: false
is: SBO:0000176
notes: GENE_ASSOCIATION:YER019W
reactant: 967154
reactant: 967142

967178
type: SpeciesReference
stoichiometry: 1.0
species: 896001

896001
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: ceramide-4 (C24) [mitochondrion]

967166
type: SpeciesReference
stoichiometry: 1.0
species: 892180

967154
type: SpeciesReference
stoichiometry: 1.0
species: 900345

900345
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: inositol-P-ceramide D (C24) [mitochondrion]

967142
type: SpeciesReference
stoichiometry: 1.0
species: 899193

897165
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: dGMP [mitochondrion]

930670
type: Reaction
product: 930730
reversible: true
fast: false
notes: GENE_ASSOCIATION:(YBR145W or YDL168W or YGL256W or YMR303C or YOL086C)
reactant: 930682
name: aldehyde dehydrogenase (2-methylbutanol, NAD)
product: 930718
modifier: meta s 2500 b r 0166
modifier: meta s 1858 b r 0166
is: SBO:0000176
reactant: 930694
modifier: meta s 1861 b r 0166
modifier: meta s 1857 b r 0166
reactant: 930706
modifier: meta s 1860 b r 0166

930730
type: SpeciesReference
stoichiometry: 1.0
species: 903080

930682
type: SpeciesReference
stoichiometry: 1.0
species: 892542

930718
type: SpeciesReference
stoichiometry: 1.0
species: 892567

930694
type: SpeciesReference
stoichiometry: 1.0
species: 899037

930706
type: SpeciesReference
stoichiometry: 1.0
species: 903140

999513
type: Reaction
reactant: 999537
name: UMP kinase
reversible: true
product: 999561
fast: false
notes: GENE_ASSOCIATION:YKL024C
reactant: 999525
modifier: 999573
product: 999549
is: SBO:0000176

999537
type: SpeciesReference
stoichiometry: 1.0
species: 906548

999561
type: SpeciesReference
stoichiometry: 1.0
species: 906464

999525
type: SpeciesReference
stoichiometry: 1.0
species: 895269

917201
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: URA6 [cytoplasm]

999549
type: SpeciesReference
stoichiometry: 1.0
species: 894813

908048
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 13
name: ACS2 [nucleus]

004577
type: Reaction
modifier: meta s 2020 b r 1143
product: 004601
reactant: 004589
notes: GENE_ASSOCIATION:YMR162C
is: SBO:0000185
fast: false
reversible: true
name: DNF3 flippase

004601
type: SpeciesReference
stoichiometry: 1.0
species: 904520

004589
type: SpeciesReference
stoichiometry: 1.0
species: 904544

969614
type: Reaction
product: 969650
reversible: true
product: 969662
notes: GENE_ASSOCIATION:YHR208W
is: SBO:0000176
modifier: meta s 1935 b r 0664
reactant: 969626
reactant: 969638
fast: false
name: isoleucine transaminase

969650
type: SpeciesReference
stoichiometry: 1.0
species: 891371

969662
type: SpeciesReference
stoichiometry: 1.0
species: 901125

969626
type: SpeciesReference
stoichiometry: 1.0
species: 892701

969638
type: SpeciesReference
stoichiometry: 1.0
species: 901377

941111
type: Reaction
reactant: 941147
fast: false
modifier: 941243
product: 941195
product: 941219
product: 941207
notes: GENE_ASSOCIATION:(YBL039C or YJR103W)
reactant: 941123
name: CTP synthase (glutamine)
product: 941183
reversible: true
is: SBO:0000176
product: 941171
reactant: 941159
modifier: 941231
reactant: 941135

941147
type: SpeciesReference
stoichiometry: 1.0
species: 901185

917238
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: URA8 [cytoplasm]

941195
type: SpeciesReference
stoichiometry: 2.0
species: 899037

941219
type: SpeciesReference
stoichiometry: 1.0
species: 904256

941207
type: SpeciesReference
stoichiometry: 1.0
species: 901101

941123
type: SpeciesReference
stoichiometry: 1.0
species: 895269

941183
type: SpeciesReference
stoichiometry: 1.0
species: 896397

941171
type: SpeciesReference
stoichiometry: 1.0
species: 894813

941159
type: SpeciesReference
stoichiometry: 1.0
species: 906716

917226
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: URA7 [cytoplasm]

941135
type: SpeciesReference
stoichiometry: 1.0
species: 899145

918812
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: PMT1:PMT2 [endoplasmic reticulum]

914719
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: PHO5 [extracellular]

891600
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: 1-(sn-glycero-3-phospho)-1D-myo-inositol [extracellular]

987699
type: Reaction
is: SBO:0000176
reactant: 987723
modifier: meta s 2643 b r 0920
reactant: 987711
name: phytoceramidase
notes: GENE_ASSOCIATION:YBR183W
product: 987735
reversible: true
fast: false

987723
type: SpeciesReference
stoichiometry: 1.0
species: 904760

917742
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: YPC1 [endoplasmic reticulum]

987711
type: SpeciesReference
stoichiometry: 1.0
species: 896073

987735
type: SpeciesReference
stoichiometry: 1.0
species: 895797

935736
type: Reaction
modifier: meta s 2678 b r 0232
reactant: 935784
reactant: 935760
notes: GENE_ASSOCIATION:((YIL043C and YMR015C and YNL111C) or (YKL150W and YMR015C and YNL111C))
reactant: 935748
reactant: 935772
is: SBO:0000176
product: 935796
reversible: true
product: 935808
modifier: meta s 2661 b r 0232
fast: false
product: 935820
name: C-22 sterol desaturase (NAD)

918162
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CYB5:ERG5:MCR1 [cytoplasm]

935784
type: SpeciesReference
stoichiometry: 1.0
species: 903848

935760
type: SpeciesReference
stoichiometry: 1.0
species: 899037

935748
type: SpeciesReference
stoichiometry: 1.0
species: 897717

935772
type: SpeciesReference
stoichiometry: 1.0
species: 903140

935796
type: SpeciesReference
stoichiometry: 1.0
species: 897693

935808
type: SpeciesReference
stoichiometry: 2.0
species: 899145

917958
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CBR1:CYB5:ERG5 [cytoplasm]

935820
type: SpeciesReference
stoichiometry: 1.0
species: 903080

988803
type: Reaction
reactant: 988815
notes: GENE_ASSOCIATION:YNL316C
product: 988851
reactant: 988827
fast: false
reversible: true
is: SBO:0000176
modifier: meta s 2396 b r 0938
name: prephenate dehydratase
product: 988863
product: 988839

988815
type: SpeciesReference
stoichiometry: 1.0
species: 899037

988851
type: SpeciesReference
stoichiometry: 1.0
species: 899145

988827
type: SpeciesReference
stoichiometry: 1.0
species: 904868

904868
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: prephenate(2-) [cytoplasm]

988863
type: SpeciesReference
stoichiometry: 1.0
species: 900657

988839
type: SpeciesReference
stoichiometry: 1.0
species: 895485

919040
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 08
name: STV1:VMA1:VMA10:VMA11:VMA13:VMA16:VMA2:VMA3:VMA4:VMA5:VMA6:VMA7:VMA8 [Golgi membrane]

933996
type: Reaction
notes: GENE_ASSOCIATION:YHR091C
product: 934056
name: arginyl-tRNA synthetase
reactant: 934032
modifier: 934080
fast: false
is: SBO:0000176
reactant: 934020
reactant: 934008
product: 934044
reversible: true
product: 934068

934056
type: SpeciesReference
stoichiometry: 1.0
species: 895209

895209
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: Arg-tRNA(Arg) [mitochondrion]

934032
type: SpeciesReference
stoichiometry: 1.0
species: 906980

913879
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: MSR1 [mitochondrion]

934020
type: SpeciesReference
stoichiometry: 1.0
species: 900825

900825
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: L-arginine [mitochondrion]

934008
type: SpeciesReference
stoichiometry: 1.0
species: 895305

934044
type: SpeciesReference
stoichiometry: 1.0
species: 895149

934068
type: SpeciesReference
stoichiometry: 1.0
species: 897405

949121
type: Reaction
reactant: 949169
fast: false
is: SBO:0000176
product: 949181
reactant: 949145
reversible: true
modifier: meta s 2649 b r 0396
product: 949193
reactant: 949157
product: 949229
name: fatty acyl-ACP synthase (n-C8:0ACP), lumped reaction
product: 949217
notes: GENE_ASSOCIATION:(YBR026C and YER061C and YHR067W and YKL055C and YKL192C and YOR221C)
reactant: 949133
product: 949205

949169
type: SpeciesReference
stoichiometry: 6.0
species: 903260

949181
type: SpeciesReference
stoichiometry: 3.0
species: 895521

949145
type: SpeciesReference
stoichiometry: 3.0
species: 895569

949193
type: SpeciesReference
stoichiometry: 3.0
species: 899193

949157
type: SpeciesReference
stoichiometry: 9.0
species: 899097

949229
type: SpeciesReference
stoichiometry: 3.0
species: 908072

949217
type: SpeciesReference
stoichiometry: 1.0
species: 903656

949133
type: SpeciesReference
stoichiometry: 1.0
species: 894584

949205
type: SpeciesReference
stoichiometry: 6.0
species: 903212

891673
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: 1-C-(indol-3-yl)glycerol 3-phosphate [cytoplasm]

954580
type: Reaction
reactant: 954592
product: 954628
name: fructose-2,6-bisphosphate 2-phosphatase
reactant: 954604
notes: GENE_ASSOCIATION:YJL155C
product: 954616
modifier: 954640
is: SBO:0000176
reversible: true
fast: false

954592
type: SpeciesReference
stoichiometry: 1.0
species: 895365

954628
type: SpeciesReference
stoichiometry: 1.0
species: 904256

954604
type: SpeciesReference
stoichiometry: 1.0
species: 899145

954616
type: SpeciesReference
stoichiometry: 1.0
species: 896601

910796
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: FBP26 [cytoplasm]

902865
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: N(1)-acetylspermidine [cytoplasm]

976013
type: Reaction
modifier: meta s 2672 b r 0752
fast: false
modifier: meta s 2673 b r 0752
product: 976049
reactant: 976037
notes: GENE_ASSOCIATION:((YBR036C and YPL057C) or (YBR036C and YBR161W))
reversible: true
is: SBO:0000176
reactant: 976025
name: MIPC synthase
product: 976061

976049
type: SpeciesReference
stoichiometry: 1.0
species: 898449

976037
type: SpeciesReference
stoichiometry: 1.0
species: 900153

900153
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: inositol-P-ceramide B (C26) [Golgi]

976025
type: SpeciesReference
stoichiometry: 1.0
species: 898497

976061
type: SpeciesReference
stoichiometry: 1.0
species: 902385

904124
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 09
name: pentadecaprenyl diphosphate [lipid particle]

008876
type: Reaction
modifier: meta s 1929 b r 1209
name: L-leucine transport
product: 008912
notes: GENE_ASSOCIATION:YJR001W
product: 008924
fast: false
reversible: true
reactant: 008900
is: SBO:0000185
reactant: 008888

008912
type: SpeciesReference
stoichiometry: 1.0
species: 899037

008924
type: SpeciesReference
stoichiometry: 1.0
species: 901449

008900
type: SpeciesReference
stoichiometry: 1.0
species: 901413

008888
type: SpeciesReference
stoichiometry: 1.0
species: 899133

917622
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: YHM2 [mitochondrial membrane]

895497
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 04
name: carbon dioxide [endoplasmic reticulum]

902169
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: malonyl-CoA [mitochondrion]

892096
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: 10-formyl-THF [mitochondrion]

943798
type: Reaction
product: 943834
fast: false
modifier: 943858
reactant: 943810
reversible: true
product: 943846
is: SBO:0000176
name: dihydoorotic acid (ubiquinone-6)
reactant: 943822
notes: GENE_ASSOCIATION:YKL216W

943834
type: SpeciesReference
stoichiometry: 1.0
species: 903788

903788
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: orotate [cytoplasm]

917129
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 10
name: URA1 [mitochondrial membrane]

943810
type: SpeciesReference
stoichiometry: 1.0
species: 891384

943846
type: SpeciesReference
stoichiometry: 1.0
species: 906440

943822
type: SpeciesReference
stoichiometry: 1.0
species: 906452

meta r 0824
type: Reaction
product: 981292
notes: GENE_ASSOCIATION:
is described by: http://identifiers.org/pubmed/17434796
name: OSH2 cytoplasm to plasma membrane
fast: false
reversible: true
is: SBO:0000176
product: 981280
reactant: 981268

981292
type: SpeciesReference
stoichiometry: 1.0
species: 914311

914311
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: OSH2 [cytoplasm]

981280
type: SpeciesReference
stoichiometry: 1.0
species: 903896

903896
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 02
name: oxysterol [cell envelope]

981268
type: SpeciesReference
stoichiometry: 1.0
species: 907676

907676
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: OSH2:oxysterol [cytoplasm]

918703
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: LSC1:LSC2 [mitochondrion]

901425
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 06
name: L-leucine [extracellular]

941807
type: Reaction
fast: false
product: 941867
reversible: true
name: cytidine deaminase
reactant: 941831
modifier: 941879
is: SBO:0000176
reactant: 941843
product: 941855
notes: GENE_ASSOCIATION:YLR245C
reactant: 941819

941867
type: SpeciesReference
stoichiometry: 1.0
species: 906680

941831
type: SpeciesReference
stoichiometry: 1.0
species: 899037

909584
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: CDD1 [cytoplasm]

941843
type: SpeciesReference
stoichiometry: 1.0
species: 899145

941855
type: SpeciesReference
stoichiometry: 1.0
species: 895089

941819
type: SpeciesReference
stoichiometry: 1.0
species: 896445

906212
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 11
name: trans-aconitate(3-) [mitochondrion]

964850
type: Reaction
notes: GENE_ASSOCIATION:(YDR367W and YKL004W)
fast: false
reactant: 964874
name: IPC synthase
is: SBO:0000176
reversible: true
modifier: meta s 2656 b r 0586
reactant: 964862
product: 964898
product: 964886

964874
type: SpeciesReference
stoichiometry: 1.0
species: 895845

895845
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 07
name: ceramide-2' (C24) [Golgi]

964862
type: SpeciesReference
stoichiometry: 1.0
species: 891733

964898
type: SpeciesReference
stoichiometry: 1.0
species: 900189

964886
type: SpeciesReference
stoichiometry: 1.0
species: 897225

909284
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: BNA4 [cytoplasm]

955132
type: Reaction
fast: false
product: 955180
modifier: 955192
notes: GENE_ASSOCIATION:YLR299W
is: SBO:0000176
reversible: true
name: g-glutamyltransferase
reactant: 955144
product: 955168
reactant: 955156

955180
type: SpeciesReference
stoichiometry: 1.0
species: 901065

901065
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-gamma-glutamyl-L-alanine [cytoplasm]

910328
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: ECM38 [cytoplasm]

955144
type: SpeciesReference
stoichiometry: 1.0
species: 898569

955168
type: SpeciesReference
stoichiometry: 1.0
species: 901017

901017
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: meta c 03
name: L-cysteinylglycine [cytoplasm]

955156
type: SpeciesReference
stoichiometry: 1.0
species: 900705