MODEL1110130001
type: SBMLModel
species: 539568
species: 539649
reaction: 540748
reaction: 540634
species: 540162
species: 539959
reaction: 541318
reaction: 540940
species: 539686
reaction: 540280
species: 540155
species: 539996
reaction: 540778
reaction: 540664
species: 539753
species: 540141
reaction: 540361
reaction: 541093
reaction: 540583
species: 540189
reaction: 540226
reaction: 541282
reaction: 541114
species: 539783
reaction: 541420
species: 539710
reaction: 541435
reaction: 540451
reaction: 541048
reaction: 541129
species: 539780
reaction: 541303
reaction: 541078
reaction: 541033
species: 539766
species: 539737
reaction: 541222
reaction: 540376
species: 539955
species: 540019
species: 540037
compartment: 539476
species: 540096
reaction: 541021
reaction: 540568
species: 539628
species: 540016
reaction: 540649
reaction: 540955
species: 539665
reaction: 540553
species: 539746
reaction: 540436
reaction: 540838
species: 540053
species: 540134
reaction: 540250
reaction: 540742
species: 540171
reaction: 540823
reaction: 540421
reaction: 540220
reaction: 540385
species: 539530
reaction: 541183
reaction: 540757
species: 539762
species: 540150
species: 540198
species: 539601
species: 540107
species: 540033
reaction: 541237
reaction: 541123
reaction: 540892
reaction: 541198
species: 539599
species: 539920
species: 539496

539568
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: _5-phosphoribosyl-5-carboxyaminoimidazole_C9H11N3O9P

539476
type: Compartment
constant: true
size: NaN
spatial dimensions: 3.0

539649
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: L-Asparagine_C4H8N2O3

540748
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reversible: true
product: 741775
kinetic law: 741823
reactant: 741737
product: 741787
reactant: 741762
product: 741799
reactant: 741750
product: 741811
notes: Abbreviation: R_GLUDy Synonyms: _0 EC Number: 1.4.1.4 SUBSYSTEM: Glutamate metabolism Equation: [c] : glu-L + h2o + nadp <==> akg + h + nadph + nh4 Confidence Level: 2 genes: LOCUS:BPLAN_514#ABBREVIATION:gdhA#ECNUMBERS:1.4.1.4# proteins: NAME:Glutamate dehydrogenase#ABBREVIATION:GdhA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_514)
fast: false
name: glutamate dehydrogenase (NADP)

741775
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species: 539622

539622
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constant: false
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initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Oxoglutarate_C5H4O5

542530
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542529
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value: 0.0

542527
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value: 999999.0

542526
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value: -999999.0

741737
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species: 539760

539760
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initial concentration: NaN
initial amount: NaN
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name: L-Glutamate_C5H8NO4

741787
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species: 539783

539783
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constant: false
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initial concentration: NaN
initial amount: NaN
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name: H+_H

741762
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species: 539967

539967
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constant: false
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has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: Nicotinamide adenine dinucleotide phosphate_C21H25N7O17P3

741799
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stoichiometry: 1.0
species: 539969

539969
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Nicotinamide adenine dinucleotide phosphate - reduced_C21H26N7O17P3

741750
type: SpeciesReference
stoichiometry: 1.0
species: 539779

539779
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: H2O_H2O

741811
type: SpeciesReference
stoichiometry: 1.0
species: 539970

539970
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Ammonium_H4N

540634
type: Reaction
kinetic law: 739812
product: 739800
reactant: 739788
notes: Abbreviation: R_EX_na1_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : na1 <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Sodium exchange

542302
type: LocalParameter
value: 0.0

542301
type: LocalParameter
value: 0.0

542299
type: LocalParameter
value: 999999.0

542298
type: LocalParameter
value: -999999.0

739800
type: SpeciesReference
stoichiometry: 1.0
species: 540162

540162
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Sodium_Na

539477
type: Compartment
constant: true
size: NaN
spatial dimensions: 3.0

739788
type: SpeciesReference
stoichiometry: 1.0
species: 539959

539959
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Sodium_Na

541318
type: Reaction
notes: Abbreviation: R_SUCD1i Synonyms: _0 EC Number: 1.3.99.1 SUBSYSTEM: Citric Acid Cycle Equation: [c] : fad + succ <==> fadh2 + fum Confidence Level: 2 JLR - made an irreversible version of the SUCD1 reaction genes: LOCUS:BPLAN_482#ABBREVIATION:sdhC# LOCUS:BPLAN_481#ABBREVIATION:sdhA#ECNUMBERS:1.3.99.1# LOCUS:BPLAN_480#ABBREVIATION:sdhB#ECNUMBERS:1.3.99.1# proteins: NAME:succinate dehydrogenase#ABBREVIATION:Sdh# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_482 and BPLAN_481 and BPLAN_480)
reactant: 754449
product: 754461
reactant: 754437
product: 754474
kinetic law: 754486
name: succinate dehydrogenase
reversible: true
fast: false

754449
type: SpeciesReference
stoichiometry: 1.0
species: 540076

540076
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Succinate_C4H4O4

754461
type: SpeciesReference
stoichiometry: 1.0
species: 539732

539732
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Flavin adenine dinucleotide reduced_C27H33N9O15P2

754437
type: SpeciesReference
stoichiometry: 1.0
species: 539731

539731
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Flavin adenine dinucleotide oxidized_C27H31N9O15P2

754474
type: SpeciesReference
stoichiometry: 1.0
species: 539747

539747
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Fumarate_C4H2O4

543794
type: LocalParameter
value: 0.0

543792
type: LocalParameter
value: 0.0

543790
type: LocalParameter
value: 999999.0

543788
type: LocalParameter
value: -999999.0

540940
type: Reaction
fast: false
reactant: 746131
kinetic law: 746180
reversible: false
reactant: 746143
notes: Abbreviation: R_NADH10 Synonyms: _0 EC Number: 1.6.5.3 SUBSYSTEM: Oxidative Phosphorylation Equation: [c] : h + mqn8 + nadh --> mql8 + nad Confidence Level: 2 JLR genes: LOCUS:BPLAN_442#ABBREVIATION:ndh#ECNUMBERS:1.16.1.-,-!-,1.6.99.3# proteins: NAME:NADH dehydrogenase II#ABBREVIATION:Ndh# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_442)
product: 746155
name: NADH dehydrogenase (menaquinone-8 & 0 protons)
reactant: 746119
product: 746167

746131
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stoichiometry: 1.0
species: 539955

539955
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Menaquinone 8_C51H72O2

542918
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value: 0.0

542916
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value: 0.0

542915
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value: 999999.0

542913
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value: 0.0

746143
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stoichiometry: 1.0
species: 539966

539966
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Nicotinamide adenine dinucleotide - reduced_C21H27N7O14P2

746155
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species: 539953

539953
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: Menaquinol 8_C51H74O2

746119
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stoichiometry: 1.0
species: 539783

746167
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species: 539964

539964
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: Nicotinamide adenine dinucleotide_C21H26N7O14P2

539686
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Deoxyadenosine_C10H13N5O3

540280
type: Reaction
reversible: false
notes: Abbreviation: R_AGMT Synonyms: _0 EC Number: 3.5.3.11 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : agm + h2o --> ptrc + urea Confidence Level: 2 genes: LOCUS:BPLAN_574#ABBREVIATION:speB#ECNUMBERS:3.5.3.11# proteins: NAME:agmatinase#ABBREVIATION:SpeB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_574)
reactant: 731923
fast: false
kinetic law: 731971
product: 731959
name: agmatinase
reactant: 731935
product: 731947

731923
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species: 539613

539613
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Agmatine_C5H16N4

541604
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541603
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541601
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value: 999999.0

541600
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731959
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stoichiometry: 1.0
species: 540117

540117
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Urea_CH4N2O

731935
type: SpeciesReference
stoichiometry: 1.0
species: 539779

731947
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stoichiometry: 1.0
species: 540034

540034
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Putrescine_C4H14N2

540155
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Isoleucine_C6H13NO2

539996
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Orotate_C5H3N2O4

540778
type: Reaction
product: 742440
reactant: 742367
reactant: 742355
kinetic law: 742464
product: 742428
reversible: false
notes: Abbreviation: R_GMPS2 Synonyms: _0 EC Number: 6.3.5.2 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : atp + gln-L + h2o + xmp --> amp + glu-L + gmp + (2) h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_161#ABBREVIATION:guaA#ECNUMBERS:6.3.5.2,-!-,6.3.4.1# proteins: NAME:GMP synthase#ABBREVIATION:GuaA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_161)
product: 742416
name: GMP synthase
product: 742404
fast: false
reactant: 742391
reactant: 742379
product: 742452

742440
type: SpeciesReference
stoichiometry: 2.0
species: 539783

742367
type: SpeciesReference
stoichiometry: 1.0
species: 539756

539756
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Glutamine_C5H10N2O3

742355
type: SpeciesReference
stoichiometry: 1.0
species: 539659

539659
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: ATP_C10H12N5O13P3

542590
type: LocalParameter
value: 0.0

542588
type: LocalParameter
value: 0.0

542587
type: LocalParameter
value: 999999.0

542585
type: LocalParameter
value: 0.0

742428
type: SpeciesReference
stoichiometry: 1.0
species: 539772

539772
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: GMP_C10H12N5O8P

742416
type: SpeciesReference
stoichiometry: 1.0
species: 539760

742404
type: SpeciesReference
stoichiometry: 1.0
species: 539638

539638
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: AMP_C10H12N5O7P

742391
type: SpeciesReference
stoichiometry: 1.0
species: 540125

540125
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Xanthosine 5'-phosphate_C10H11N4O9P

742379
type: SpeciesReference
stoichiometry: 1.0
species: 539779

742452
type: SpeciesReference
stoichiometry: 1.0
species: 540021

540021
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Diphosphate_HO7P2

540664
type: Reaction
kinetic law: 740177
product: 740165
reactant: 740153
notes: Abbreviation: R_EX_ser_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : ser-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Serine exchange

542362
type: LocalParameter
value: 0.0

542361
type: LocalParameter
value: 0.0

542359
type: LocalParameter
value: 999999.0

542358
type: LocalParameter
value: 0.0

740165
type: SpeciesReference
stoichiometry: 1.0
species: 540192

540192
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Serine_C3H7NO3

740153
type: SpeciesReference
stoichiometry: 1.0
species: 540059

540059
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Serine_C3H7NO3

539753
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Glycolaldehyde_C2H4O2

540141
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Formate_CH1O2

540361
type: Reaction
product: 733783
reversible: false
notes: Abbreviation: R_ATPPRT Synonyms: _0 EC Number: 2.4.2.17 SUBSYSTEM: Histidine Metabolism Equation: [c] : atp + prpp --> ppi + prbatp Confidence Level: 2 genes: LOCUS:BPLAN_207#ABBREVIATION:hisG#ECNUMBERS:2.4.2.17# proteins: NAME:ATP phosphoribosyltransferase#ABBREVIATION:HisG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_207)
fast: false
product: 733795
kinetic law: 733807
reactant: 733759
name: ATP phosphoribosyltransferase
reactant: 733771

733783
type: SpeciesReference
stoichiometry: 1.0
species: 540021

733795
type: SpeciesReference
stoichiometry: 1.0
species: 540025

540025
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _1-(5-Phosphoribosyl)-ATP_C15H19N5O20P4

541766
type: LocalParameter
value: 0.0

541765
type: LocalParameter
value: 0.0

541763
type: LocalParameter
value: 999999.0

541762
type: LocalParameter
value: 0.0

733759
type: SpeciesReference
stoichiometry: 1.0
species: 539659

733771
type: SpeciesReference
stoichiometry: 1.0
species: 540031

540031
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-Phospho-alpha-D-ribose 1-diphosphate_C5H8O14P3

541093
type: Reaction
product: 749514
reactant: 749478
reactant: 749490
product: 749502
fast: false
reversible: false
notes: Abbreviation: R_PAPPT3 Synonyms: _0 EC Number: 2.7.8.13 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : udcpp + ugmda --> uagmda + ump Confidence Level: 2 genes: LOCUS:BPLAN_253#ABBREVIATION:mraY#ECNUMBERS:2.7.8.13# proteins: NAME:Phospho-N-acetylmuramoyl-pentapeptide transferase#ABBREVIATION:MraY# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_253)
kinetic law: 749526
name: phospho-N-acetylmuramoyl-pentapeptide-transferase (meso-2,6-diaminopimelate)

749514
type: SpeciesReference
stoichiometry: 1.0
species: 540114

540114
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: UMP_C9H11N2O9P

749478
type: SpeciesReference
stoichiometry: 1.0
species: 540109

540109
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Undecaprenyl phosphate_C55H89O4P

749490
type: SpeciesReference
stoichiometry: 1.0
species: 540113

540113
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476

749502
type: SpeciesReference
stoichiometry: 1.0
species: 540104

540104
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476

543269
type: LocalParameter
value: 0.0

543267
type: LocalParameter
value: 0.0

543265
type: LocalParameter
value: 999999.0

543263
type: LocalParameter
value: 0.0

540583
type: Reaction
kinetic law: 739197
product: 739185
reactant: 739173
notes: Abbreviation: R_EX_fum_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : fum <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Fumarate exchange

542200
type: LocalParameter
value: 0.0

542199
type: LocalParameter
value: 0.0

542197
type: LocalParameter
value: 999999.0

542196
type: LocalParameter
value: 0.0

739185
type: SpeciesReference
stoichiometry: 1.0
species: 540143

540143
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Fumarate_C4H2O4

739173
type: SpeciesReference
stoichiometry: 1.0
species: 539748

539748
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Fumarate_C4H2O4

540189
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Pyruvate_C3H3O3

540226
type: Reaction
reactant: 730801
reversible: false
product: 730825
name: _2-aceto-2-hydroxybutanoate synthase
kinetic law: 730838
product: 730813
reactant: 730789
fast: false
reactant: 730777
notes: Abbreviation: R_ACHBS Synonyms: _0 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 2obut + h + pyr --> 2ahbut + co2 Confidence Level: 2 JLR- I think the EC is 4.1.3.18 genes: LOCUS:BPLAN_084#ABBREVIATION:ilvI#ECNUMBERS:2.2.1.6# LOCUS:BPLAN_085#ABBREVIATION:ilvH#ECNUMBERS:2.2.1.6# proteins: NAME:acetolactate synthase III#ABBREVIATION:IlvHI# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_085 and BPLAN_084)

730801
type: SpeciesReference
stoichiometry: 1.0
species: 540038

540038
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Pyruvate_C3H3O3

730825
type: SpeciesReference
stoichiometry: 1.0
species: 539673

539673
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: CO2_CO2

541499
type: LocalParameter
value: 0.0

541498
type: LocalParameter
value: 0.0

541496
type: LocalParameter
value: 999999.0

541495
type: LocalParameter
value: 0.0

730813
type: SpeciesReference
stoichiometry: 1.0
species: 539498

539498
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (S)-2-Aceto-2-hydroxybutanoate_C6H9O4

730789
type: SpeciesReference
stoichiometry: 1.0
species: 539783

730777
type: SpeciesReference
stoichiometry: 1.0
species: 539512

539512
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Oxobutanoate_C4H5O3

541282
type: Reaction
product: 753687
fast: false
reactant: 753675
reversible: false
notes: Abbreviation: R_SEPHCHC Synonyms: _1 EC Number: 4.1.1.71 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : ichor + akg + (2) h --> co2 + 5ephchc Confidence Level: 2 JLR genes: LOCUS:BPLAN_577#ABBREVIATION:menD#ECNUMBERS:4.1.1.71,-!-,2.2.1.9# proteins: NAME:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase#ABBREVIATION:MenD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_577)
name: _2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
reactant: 753650
reactant: 753663
product: 753699
kinetic law: 753712

753687
type: SpeciesReference
stoichiometry: 1.0
species: 539673

753675
type: SpeciesReference
stoichiometry: 2.0
species: 539783

753650
type: SpeciesReference
stoichiometry: 1.0
species: 539797

539797
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Isochorismate_C10H8O6

753663
type: SpeciesReference
stoichiometry: 1.0
species: 539622

753699
type: SpeciesReference
stoichiometry: 1.0
species: 539572

539572
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-enolpyruvoyl-6-hydroxy-2-succinyl-3-cyclohexene-1-carboxylate_C14H14O9

543710
type: LocalParameter
value: 0.0

543708
type: LocalParameter
value: 0.0

543706
type: LocalParameter
value: 999999.0

543704
type: LocalParameter
value: 0.0

541114
type: Reaction
reactant: 750021
notes: Abbreviation: R_PGCD Synonyms: _0 EC Number: 1.1.1.95 SUBSYSTEM: Glycine and Serine Metabolism Equation: [c] : 3pg + nad <==> 3php + h + nadh Confidence Level: 2 genes: LOCUS:BPLAN_357#ABBREVIATION:serA#ECNUMBERS:1.1.1.95# proteins: NAME:Phosphoglycerate dehydrogenase#ABBREVIATION:SerA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_357)
name: phosphoglycerate dehydrogenase
reactant: 750033
product: 750057
kinetic law: 750082
fast: false
product: 750069
reversible: true
product: 750045

750021
type: SpeciesReference
stoichiometry: 1.0
species: 539540

539540
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Phospho-D-glycerate_C3H4O7P

750033
type: SpeciesReference
stoichiometry: 1.0
species: 539964

750057
type: SpeciesReference
stoichiometry: 1.0
species: 539783

543318
type: LocalParameter
value: 0.0

543316
type: LocalParameter
value: 0.0

543314
type: LocalParameter
value: 999999.0

543312
type: LocalParameter
value: -999999.0

750069
type: SpeciesReference
stoichiometry: 1.0
species: 539966

750045
type: SpeciesReference
stoichiometry: 1.0
species: 539542

539542
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Phosphohydroxypyruvate_C3H2O7P

541420
type: Reaction
reactant: 756780
kinetic law: 756864
product: 756828
product: 756840
reactant: 756792
fast: false
product: 756852
reversible: false
product: 756816
reactant: 756804
name: UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine synthetase
notes: Abbreviation: R_UGMDDS Synonyms: _0 EC Number: 6.3.2.15 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : alaala + atp + ugmd --> adp + h + pi + ugmda Confidence Level: 2 genes: LOCUS:BPLAN_535#ABBREVIATION:murF#ECNUMBERS:6.3.2.10# proteins: NAME:D-alanine:D-alanine-adding enzme#ABBREVIATION:MurF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_535)

756780
type: SpeciesReference
stoichiometry: 1.0
species: 539632

539632
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Alanyl-D-alanine_C6H12N2O3

544032
type: LocalParameter
value: 0.0

544030
type: LocalParameter
value: 0.0

544028
type: LocalParameter
value: 999999.0

544026
type: LocalParameter
value: 0.0

756828
type: SpeciesReference
stoichiometry: 1.0
species: 539783

756840
type: SpeciesReference
stoichiometry: 1.0
species: 540013

540013
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Phosphate_HO4P

756792
type: SpeciesReference
stoichiometry: 1.0
species: 539659

756852
type: SpeciesReference
stoichiometry: 1.0
species: 540113

756816
type: SpeciesReference
stoichiometry: 1.0
species: 539611

539611
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: ADP_C10H12N5O10P2

756804
type: SpeciesReference
stoichiometry: 1.0
species: 540112

540112
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476

539710
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Dihydroneopterin monophosphate_C9H12N5O7P

541435
type: Reaction
kinetic law: 757141
product: 757129
reactant: 757117
notes: Abbreviation: R_UREAt Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: urea[e] <==> urea[c] Confidence Level: 2 JLR genes: LOCUS:BPLAN_180#ABBREVIATION:glpF# proteins: NAME:MIP channel, glycerol diffusion#ABBREVIATION:GlpF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_180)
fast: false
reversible: true
name: Urea transport via facilitate diffusion

544067
type: LocalParameter
value: 0.0

544065
type: LocalParameter
value: 0.0

544063
type: LocalParameter
value: 999999.0

544061
type: LocalParameter
value: -999999.0

757129
type: SpeciesReference
stoichiometry: 1.0
species: 540117

757117
type: SpeciesReference
stoichiometry: 1.0
species: 540118

540118
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Urea_CH4N2O

540451
type: Reaction
fast: false
product: 736675
notes: Abbreviation: R_DASYN_Pam Synonyms: _0 EC Number: 2.7.7.41 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : ctp + h + (0.02) pa_Pam --> (0.02) cdpdag_Pam + ppi Confidence Level: 2 tv genes: LOCUS:BPLAN_412#ABBREVIATION:cdsA#ECNUMBERS:2.7.7.41# proteins: NAME:CDP-diglyceride synthetase#ABBREVIATION:CdsA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_412)
product: 736663
kinetic law: 736687
reactant: 736639
reactant: 736627
name: CDP-Diacylglycerol synthetase
reactant: 736651
reversible: false

736675
type: SpeciesReference
stoichiometry: 1.0
species: 540021

736663
type: SpeciesReference
stoichiometry: 0.02
species: 539665

539665
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: CDPdiacylglycerol (Blattabacterium Periplaneta americana)_C2286H3998N150O750P100

541943
type: LocalParameter
value: 0.0

541941
type: LocalParameter
value: 0.0

541940
type: LocalParameter
value: 999999.0

541938
type: LocalParameter
value: 0.0

736639
type: SpeciesReference
stoichiometry: 1.0
species: 539783

736627
type: SpeciesReference
stoichiometry: 1.0
species: 539681

539681
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: CTP_C9H12N3O14P3

736651
type: SpeciesReference
stoichiometry: 0.02
species: 539999

539999
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: phosphatidate (Blattabacterium Periplaneta americana)_C1836H3398O400P50

541048
type: Reaction
kinetic law: 748562
product: 748549
reactant: 748512
reversible: false
product: 748536
notes: Abbreviation: R_NTPP5 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : datp + h2o --> damp + h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_237#ABBREVIATION:mazG# proteins: NAME:Nucleotide triphosphate pyrophosphohydrolase#ABBREVIATION:MazG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_237)
product: 748524
reactant: 748500
name: Nucleoside triphosphate pyrophosphorylase (datp)
fast: false

543164
type: LocalParameter
value: 0.0

543162
type: LocalParameter
value: 0.0

543160
type: LocalParameter
value: 999999.0

543158
type: LocalParameter
value: 0.0

748549
type: SpeciesReference
stoichiometry: 1.0
species: 540021

748512
type: SpeciesReference
stoichiometry: 1.0
species: 539779

748536
type: SpeciesReference
stoichiometry: 1.0
species: 539783

748524
type: SpeciesReference
stoichiometry: 1.0
species: 539688

539688
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dAMP_C10H12N5O6P

748500
type: SpeciesReference
stoichiometry: 1.0
species: 539689

539689
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dATP_C10H12N5O12P3

541129
type: Reaction
product: 750351
reactant: 750314
kinetic law: 750363
name: phosphate transport in/out via three Na+ symporter
reactant: 750326
reversible: true
product: 750338
fast: false
notes: Abbreviation: R_PIt7 Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: (3) na1[e] + pi[e] <==> (3) na1[c] + pi[c] Confidence Level: 2 NCD genes: LOCUS:BPLAN_272#ABBREVIATION:pit# proteins: NAME:phosphate sodium symporter#ABBREVIATION:Pit# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_272)

750351
type: SpeciesReference
stoichiometry: 1.0
species: 540013

750314
type: SpeciesReference
stoichiometry: 3.0
species: 539959

543353
type: LocalParameter
value: 0.0

543351
type: LocalParameter
value: 0.0

543349
type: LocalParameter
value: 999999.0

543347
type: LocalParameter
value: -999999.0

750326
type: SpeciesReference
stoichiometry: 1.0
species: 540014

540014
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Phosphate_HO4P

750338
type: SpeciesReference
stoichiometry: 3.0
species: 539958

539958
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Sodium_Na

539780
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: H2O_H2O

541303
type: Reaction
reversible: false
reactant: 754110
kinetic law: 754171
reactant: 754122
product: 754146
name: O-succinylhomoserine lyase (L-cysteine)
product: 754158
product: 754134
fast: false
notes: Abbreviation: R_SHSL1 Synonyms: _2 EC Number: 4.2.99.9 SUBSYSTEM: Methionine Metabolism Equation: [c] : cys-L + suchms --> cyst-L + h + succ Confidence Level: 2 new EC - EC 2.5.1.48 NJ genes: LOCUS:BPLAN_072#ABBREVIATION:metBC#ECNUMBERS:2.5.1.48# proteins: NAME:Cystathionine gamma-synthase-cystathionine beta-lyase#ABBREVIATION:MetBC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_072)

754110
type: SpeciesReference
stoichiometry: 1.0
species: 539682

539682
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Cysteine_C3H7NO2S

543759
type: LocalParameter
value: 0.0

543757
type: LocalParameter
value: 0.0

543755
type: LocalParameter
value: 999999.0

543753
type: LocalParameter
value: 0.0

754122
type: SpeciesReference
stoichiometry: 1.0
species: 540079

540079
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: O-Succinyl-L-homoserine_C8H12NO6

754146
type: SpeciesReference
stoichiometry: 1.0
species: 539783

754158
type: SpeciesReference
stoichiometry: 1.0
species: 540076

754134
type: SpeciesReference
stoichiometry: 1.0
species: 539684

539684
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Cystathionine_C7H14N2O4S

541078
type: Reaction
notes: Abbreviation: R_OMBZLM Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 2ombzl + amet --> 2ommbl + ahcys + h Confidence Level: 2 JLR genes: LOCUS:BPLAN_525#ABBREVIATION:ubiE#ECNUMBERS:2.1.1.-# proteins: NAME:_2-DMK methyltransferase and 2-octaprenyl-6-methoxy-1,4-benzoquinonol methylase#ABBREVIATION:UbiE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_525)
name: _2-Octaprenyl-6-methoxy-benzoquinol methylase
reactant: 749165
reversible: false
product: 749189
fast: false
kinetic law: 749213
product: 749177
reactant: 749153
product: 749201

749165
type: SpeciesReference
stoichiometry: 1.0
species: 539636

539636
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: S-Adenosyl-L-methionine_C15H23N6O5S

749189
type: SpeciesReference
stoichiometry: 1.0
species: 539615

539615
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: S-Adenosyl-L-homocysteine_C14H20N6O5S

543234
type: LocalParameter
value: 0.0

543232
type: LocalParameter
value: 0.0

543230
type: LocalParameter
value: 999999.0

543228
type: LocalParameter
value: 0.0

749177
type: SpeciesReference
stoichiometry: 1.0
species: 539516

539516
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Octaprenyl-3-methyl-6-methoxy- 1,4-benzoquinol_C48H74O3

749153
type: SpeciesReference
stoichiometry: 1.0
species: 539514

539514
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Octaprenyl-6-methoxy-1,4-benzoquinol_C47H72O3

749201
type: SpeciesReference
stoichiometry: 1.0
species: 539783

541033
type: Reaction
fast: false
notes: Abbreviation: R_NTD9 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : gmp + h2o --> gsn + pi Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 748197
product: 748173
reactant: 748149
reactant: 748161
product: 748185
name: _5'-nucleotidase (GMP)
reversible: false

543129
type: LocalParameter
value: 0.0

543127
type: LocalParameter
value: 0.0

543125
type: LocalParameter
value: 999999.0

543123
type: LocalParameter
value: 0.0

748173
type: SpeciesReference
stoichiometry: 1.0
species: 539774

539774
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Guanosine_C10H13N5O5

748149
type: SpeciesReference
stoichiometry: 1.0
species: 539772

748161
type: SpeciesReference
stoichiometry: 1.0
species: 539779

748185
type: SpeciesReference
stoichiometry: 1.0
species: 540013

539766
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: D-Glyceraldehyde_C3H6O3

539737
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide_C8H13N2O9P

541222
type: Reaction
kinetic law: 752443
name: purine-nucleoside phosphorylase (Guanosine)
product: 752419
fast: false
notes: Abbreviation: R_PUNP3 Synonyms: _0 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : gsn + pi <==> gua + r1p Confidence Level: 2 Specificity not completely determined. Can also catalyse ribosyltransferase reactions of the type catalysed by EC 2.4.2.5, nucleoside ribosyltransferase genes: LOCUS:BPLAN_265#ABBREVIATION:xapA#ECNUMBERS:2.4.2.1# proteins: NAME:purine nucleoside phosphorylase#ABBREVIATION:XapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_265)
reactant: 752406
product: 752431
reactant: 752394
reversible: true

543570
type: LocalParameter
value: 0.0

543568
type: LocalParameter
value: 0.0

543566
type: LocalParameter
value: 999999.0

543564
type: LocalParameter
value: -999999.0

752419
type: SpeciesReference
stoichiometry: 1.0
species: 539777

539777
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Guanine_C5H5N5O

752406
type: SpeciesReference
stoichiometry: 1.0
species: 540013

752431
type: SpeciesReference
stoichiometry: 1.0
species: 540040

540040
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: alpha-D-Ribose 1-phosphate_C5H9O8P

752394
type: SpeciesReference
stoichiometry: 1.0
species: 539774

540376
type: Reaction
reactant: 734666
reactant: 734690
product: 734727
fast: false
name: Fatty acid biosynthesis (n-C14:0)
reversible: false
reactant: 734678
product: 734702
product: 734751
reactant: 734653
kinetic law: 734763
product: 734715
notes: Abbreviation: R_C140SN Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : actACP + (17) h + (5) malACP + (12) nadph --> (5) ACP + (5) co2 + (6) h2o + myrsACP + (12) nadp Confidence Level: 2 tvNeidhardt genes: LOCUS:BPLAN_596#ABBREVIATION:fabZ#ECNUMBERS:4.2.1.-# LOCUS:BPLAN_294#ABBREVIATION:fabI#ECNUMBERS:1.3.1.9# LOCUS:BPLAN_576#ABBREVIATION:fabG#ECNUMBERS:1.1.1.100# LOCUS:BPLAN_555#ABBREVIATION:fabF#ECNUMBERS:2.3.1.179# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase II#ABBREVIATION:FabF# NAME:_3-oxoacyl-ACP reductase#ABBREVIATION:FabG# NAME:Enoyl-(acyl-carrier-protein) reductase (NADH)#ABBREVIATION:FabI# NAME:(3R)-hydroxymyriostoyl-(acyl carrier protein) dehydratase#ABBREVIATION:FabZ# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_596) and (BPLAN_555) and (BPLAN_294) and (BPLAN_576)
product: 734739

734666
type: SpeciesReference
stoichiometry: 17.0
species: 539783

734690
type: SpeciesReference
stoichiometry: 12.0
species: 539969

734727
type: SpeciesReference
stoichiometry: 6.0
species: 539779

734678
type: SpeciesReference
stoichiometry: 5.0
species: 539939

539939
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Malonyl-[acyl-carrier protein]_C14H22N2O10PRS

734702
type: SpeciesReference
stoichiometry: 5.0
species: 539601

539601
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: acyl carrier protein_C11H21N2O7PRS

734751
type: SpeciesReference
stoichiometry: 12.0
species: 539967

734653
type: SpeciesReference
stoichiometry: 1.0
species: 539605

539605
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Acetoacetyl-ACP_C15H25N2O9PRS

541796
type: LocalParameter
value: 0.0

541795
type: LocalParameter
value: 0.0

541793
type: LocalParameter
value: 999999.0

541792
type: LocalParameter
value: 0.0

734715
type: SpeciesReference
stoichiometry: 5.0
species: 539673

734739
type: SpeciesReference
stoichiometry: 1.0
species: 539956

539956
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Myristoyl-ACP (n-C14:0ACP)_C25H47N2O8PRS

540019
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Prephenate_C10H8O6

540037
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Pyridoxal_C8H9NO3

540096
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Tyrosine_C9H11NO3

541021
type: Reaction
name: _5'-nucleotidase (dTMP)
reactant: 747920
reactant: 747908
product: 747945
product: 747932
notes: Abbreviation: R_NTD5 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Sugar Metabolism Equation: [c] : dtmp + h2o --> pi + thymd Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
kinetic law: 747957
reversible: false

747920
type: SpeciesReference
stoichiometry: 1.0
species: 539779

747908
type: SpeciesReference
stoichiometry: 1.0
species: 539719

539719
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dTMP_C10H13N2O8P

747945
type: SpeciesReference
stoichiometry: 1.0
species: 540091

540091
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Thymidine_C10H14N2O5

747932
type: SpeciesReference
stoichiometry: 1.0
species: 540013

543101
type: LocalParameter
value: 0.0

543099
type: LocalParameter
value: 0.0

543097
type: LocalParameter
value: 999999.0

543095
type: LocalParameter
value: 0.0

540568
type: Reaction
kinetic law: 739016
product: 739004
reactant: 738991
notes: Abbreviation: R_EX_cys_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : cys-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Cysteine exchange

542170
type: LocalParameter
value: 0.0

542169
type: LocalParameter
value: 0.0

542167
type: LocalParameter
value: 999999.0

542166
type: LocalParameter
value: 0.0

739004
type: SpeciesReference
stoichiometry: 1.0
species: 540137

540137
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Cysteine_C3H7NO2S

738991
type: SpeciesReference
stoichiometry: 1.0
species: 539683

539683
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Cysteine_C3H7NO2S

539628
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Alanine_C3H7NO2

540016
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: (R)-Pantothenate_C9H16NO5

540649
type: Reaction
kinetic law: 739995
product: 739983
reactant: 739971
notes: Abbreviation: R_EX_pi_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : pi <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Phosphate exchange

542332
type: LocalParameter
value: 0.0

542331
type: LocalParameter
value: 0.0

542329
type: LocalParameter
value: 999999.0

542328
type: LocalParameter
value: -999999.0

739983
type: SpeciesReference
stoichiometry: 1.0
species: 540177

540177
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Phosphate_HO4P

739971
type: SpeciesReference
stoichiometry: 1.0
species: 540014

540955
type: Reaction
name: NAD synthase (nh3)
product: 746542
reactant: 746518
reactant: 746530
product: 746566
product: 746554
product: 746579
fast: false
reversible: false
reactant: 746505
kinetic law: 746591
notes: Abbreviation: R_NADS1 Synonyms: _0 EC Number: 6.3.1.5 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + dnad + nh4 --> amp + h + nad + ppi Confidence Level: 2 genes: LOCUS:BPLAN_069#ABBREVIATION:nadE#ECNUMBERS:6.3.5.1# proteins: NAME:Deamido-NAD ammonia ligase or NAD synthetase#ABBREVIATION:NadE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_069)

746542
type: SpeciesReference
stoichiometry: 1.0
species: 539638

746518
type: SpeciesReference
stoichiometry: 1.0
species: 539716

539716
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Deamino-NAD+_C21H24N6O15P2

746530
type: SpeciesReference
stoichiometry: 1.0
species: 539970

746566
type: SpeciesReference
stoichiometry: 1.0
species: 539964

746554
type: SpeciesReference
stoichiometry: 1.0
species: 539783

746579
type: SpeciesReference
stoichiometry: 1.0
species: 540021

746505
type: SpeciesReference
stoichiometry: 1.0
species: 539659

542950
type: LocalParameter
value: 0.0

542949
type: LocalParameter
value: 0.0

542947
type: LocalParameter
value: 999999.0

542945
type: LocalParameter
value: 0.0

540553
type: Reaction
kinetic law: 738835
product: 738823
reactant: 738811
notes: Abbreviation: R_EX_ala_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : ala-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Alanine exchange

542140
type: LocalParameter
value: 0.0

542139
type: LocalParameter
value: 0.0

542137
type: LocalParameter
value: 999999.0

542136
type: LocalParameter
value: 0.0

738823
type: SpeciesReference
stoichiometry: 1.0
species: 540132

540132
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Alanine_C3H7NO2

738811
type: SpeciesReference
stoichiometry: 1.0
species: 539630

539630
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Alanine_C3H7NO2

539746
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: D-Fructose_C6H12O6

540436
type: Reaction
notes: Abbreviation: R_CYTK2 Synonyms: _0 EC Number: 2.7.4.14 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dcmp <==> adp + dcdp Confidence Level: 2 genes: LOCUS:BPLAN_575#ABBREVIATION:cmk#ECNUMBERS:2.7.4.14# proteins: NAME:cytidine monophosphate kinase#ABBREVIATION:Cmk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_575)
name: cytidylate kinase (dCMP)
reactant: 736338
kinetic law: 736386
product: 736374
reactant: 736350
fast: false
reversible: true
product: 736362

736338
type: SpeciesReference
stoichiometry: 1.0
species: 539659

541915
type: LocalParameter
value: 0.0

541914
type: LocalParameter
value: 0.0

541912
type: LocalParameter
value: 999999.0

541911
type: LocalParameter
value: -999999.0

736374
type: SpeciesReference
stoichiometry: 1.0
species: 539693

539693
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dCDP_C9H12N3O10P2

736350
type: SpeciesReference
stoichiometry: 1.0
species: 539694

539694
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dCMP_C9H12N3O7P

736362
type: SpeciesReference
stoichiometry: 1.0
species: 539611

540838
type: Reaction
product: 743757
reactant: 743721
name: indole-3-glycerol-phosphate synthase
kinetic law: 743769
notes: Abbreviation: R_IGPS Synonyms: _0 EC Number: 4.1.1.48 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : 2cpr5p + h --> 3ig3p + co2 + h2o Confidence Level: 2 genes: LOCUS:BPLAN_217#ABBREVIATION:trpC#ECNUMBERS:4.1.1.48# proteins: NAME:Indole-3-glycerol phosphate synthase#ABBREVIATION:TrpC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_217)
product: 743745
product: 743733
fast: false
reversible: false
reactant: 743709

743757
type: SpeciesReference
stoichiometry: 1.0
species: 539779

743721
type: SpeciesReference
stoichiometry: 1.0
species: 539783

542712
type: LocalParameter
value: 0.0

542710
type: LocalParameter
value: 0.0

542708
type: LocalParameter
value: 999999.0

542706
type: LocalParameter
value: 0.0

743745
type: SpeciesReference
stoichiometry: 1.0
species: 539673

743733
type: SpeciesReference
stoichiometry: 1.0
species: 539534

539534
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: C'-(3-Indolyl)-glycerol 3-phosphate_C11H12NO6P

743709
type: SpeciesReference
stoichiometry: 1.0
species: 539500

539500
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate_C12H13NO9P

540053
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: O-Succinylbenzoyl-CoA_C32H39N7O20P3S

540134
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Asparagine_C4H8N2O3

540250
type: Reaction
reactant: 731307
fast: false
notes: Abbreviation: R_ADD Synonyms: _0 EC Number: 3.5.4.2 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : ade + h + h2o --> hxan + nh4 Confidence Level: 1 note: reaction also occures spontaneously - oxidative deaminination (MKA) genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 731355
name: adenine deaminase
reactant: 731295
reversible: false
product: 731331
product: 731343
reactant: 731319

731307
type: SpeciesReference
stoichiometry: 1.0
species: 539783

541545
type: LocalParameter
value: 0.0

541544
type: LocalParameter
value: 0.0

541542
type: LocalParameter
value: 999999.0

541541
type: LocalParameter
value: 0.0

731295
type: SpeciesReference
stoichiometry: 1.0
species: 539607

539607
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Adenine_C5H5N5

731331
type: SpeciesReference
stoichiometry: 1.0
species: 539796

539796
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Hypoxanthine_C5H4N4O

731343
type: SpeciesReference
stoichiometry: 1.0
species: 539970

731319
type: SpeciesReference
stoichiometry: 1.0
species: 539779

540742
type: Reaction
reactant: 741579
kinetic law: 741627
notes: Abbreviation: R_GK1 Synonyms: _0 EC Number: 2.7.4.8 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + gmp <==> adp + gdp Confidence Level: 2 genes: LOCUS:BPLAN_343#ABBREVIATION:gmk#ECNUMBERS:2.7.4.8# proteins: NAME:Guanylate kinase#ABBREVIATION:Gmk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_343)
reactant: 741591
name: guanylate kinase (GMP:ATP)
product: 741603
reversible: true
fast: false
product: 741615

741579
type: SpeciesReference
stoichiometry: 1.0
species: 539659

542518
type: LocalParameter
value: 0.0

542517
type: LocalParameter
value: 0.0

542515
type: LocalParameter
value: 999999.0

542514
type: LocalParameter
value: -999999.0

741591
type: SpeciesReference
stoichiometry: 1.0
species: 539772

741603
type: SpeciesReference
stoichiometry: 1.0
species: 539611

741615
type: SpeciesReference
stoichiometry: 1.0
species: 539754

539754
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: GDP_C10H12N5O11P2

540171
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: O2_O2

540823
type: Reaction
reactant: 743414
product: 743438
name: homoserine O-succinyltransferase
kinetic law: 743462
reversible: false
product: 743450
reactant: 743426
notes: Abbreviation: R_HSST Synonyms: _0 EC Number: 2.3.1.46 SUBSYSTEM: Methionine Metabolism Equation: [c] : hom-L + succoa --> coa + suchms Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false

743414
type: SpeciesReference
stoichiometry: 1.0
species: 539795

539795
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Homoserine_C4H9NO3

743438
type: SpeciesReference
stoichiometry: 1.0
species: 539677

539677
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Coenzyme A_C21H32N7O16P3S

542680
type: LocalParameter
value: 0.0

542678
type: LocalParameter
value: 0.0

542677
type: LocalParameter
value: 999999.0

542675
type: LocalParameter
value: 0.0

743450
type: SpeciesReference
stoichiometry: 1.0
species: 540079

743426
type: SpeciesReference
stoichiometry: 1.0
species: 540078

540078
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Succinyl-CoA_C25H35N7O19P3S

540421
type: Reaction
reactant: 735976
product: 736012
kinetic law: 736036
reactant: 735988
name: cystathionine b-lyase
product: 736024
fast: false
reversible: false
product: 736000
notes: Abbreviation: R_CYSTL Synonyms: _0 EC Number: 4.4.1.8 SUBSYSTEM: Methionine Metabolism Equation: [c] : cyst-L + h2o --> hcys-L + nh4 + pyr Confidence Level: 2 genes: LOCUS:BPLAN_072#ABBREVIATION:metBC#ECNUMBERS:4.4.1.8# proteins: NAME:Cystathionine gamma-synthase-cystathionine beta-lyase#ABBREVIATION:MetC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_072)

735976
type: SpeciesReference
stoichiometry: 1.0
species: 539684

736012
type: SpeciesReference
stoichiometry: 1.0
species: 539970

541886
type: LocalParameter
value: 0.0

541885
type: LocalParameter
value: 0.0

541883
type: LocalParameter
value: 999999.0

541882
type: LocalParameter
value: 0.0

735988
type: SpeciesReference
stoichiometry: 1.0
species: 539779

736024
type: SpeciesReference
stoichiometry: 1.0
species: 540038

736000
type: SpeciesReference
stoichiometry: 1.0
species: 539787

539787
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Homocysteine_C4H9NO2S

540220
type: Reaction
reactant: 730655
notes: Abbreviation: R_ACGK Synonyms: _0 EC Number: 2.7.2.8 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : acglu + atp --> acg5p + adp Confidence Level: 2 genes: LOCUS:BPLAN_321#ABBREVIATION:argB#ECNUMBERS:2.7.2.8# proteins: NAME:acetylglutamate kinase#ABBREVIATION:ArgB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_321)
fast: false
name: acetylglutamate kinase
product: 730667
kinetic law: 730692
product: 730680
reactant: 730643
reversible: false

730655
type: SpeciesReference
stoichiometry: 1.0
species: 539659

730667
type: SpeciesReference
stoichiometry: 1.0
species: 539592

539592
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N-Acetyl-L-glutamyl 5-phosphate_C7H9NO8P

541483
type: LocalParameter
value: 0.0

541480
type: LocalParameter
value: 0.0

541477
type: LocalParameter
value: 999999.0

541474
type: LocalParameter
value: 0.0

730680
type: SpeciesReference
stoichiometry: 1.0
species: 539611

730643
type: SpeciesReference
stoichiometry: 1.0
species: 539597

539597
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N-Acetyl-L-glutamate_C7H9NO5

540385
type: Reaction
kinetic law: 735127
name: Fatty acid biosynthesis (n-C16:1)
product: 735078
product: 735090
reactant: 735017
notes: Abbreviation: R_C161SN Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : actACP + (19) h + (6) malACP + (13) nadph --> (6) ACP + (6) co2 + (7) h2o + hdeACP + (13) nadp Confidence Level: 2 tv genes: LOCUS:BPLAN_596#ABBREVIATION:fabZ#ECNUMBERS:4.2.1.-# LOCUS:none#ABBREVIATION:fabA#ECNUMBERS:4.2.1.60# LOCUS:BPLAN_294#ABBREVIATION:fabI#ECNUMBERS:1.3.1.9# LOCUS:BPLAN_576#ABBREVIATION:fabG#ECNUMBERS:1.1.1.100# LOCUS:BPLAN_555#ABBREVIATION:fabF#ECNUMBERS:2.3.1.179# LOCUS:BPLAN_524#ABBREVIATION:fabH#ECNUMBERS:2.3.1.41# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase#ABBREVIATION:FabH# NAME:_3-oxoacyl-[acyl-carrier-protein] synthase II#ABBREVIATION:FabF# NAME:_3-oxoacyl-ACP reductase#ABBREVIATION:FabG# NAME:Enoyl-(acyl-carrier-protein) reductase (NADH)#ABBREVIATION:FabI# NAME:beta-hydroxydecanoyl thioester dehydrase#ABBREVIATION:FabA# NAME:(3R)-hydroxymyriostoyl-(acyl carrier protein) dehydratase#ABBREVIATION:FabZ# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_596) and (BPLAN_555) or (BPLAN_524) and (BPLAN_576) and (BPLAN_294)
product: 735115
product: 735066
reversible: false
fast: false
product: 735102
reactant: 735054
reactant: 735029
reactant: 735042

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value: 0.0

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value: 0.0

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value: 999999.0

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value: 0.0

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species: 539673

735090
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stoichiometry: 7.0
species: 539779

735017
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species: 539605

735115
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stoichiometry: 13.0
species: 539967

735066
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stoichiometry: 6.0
species: 539601

735102
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stoichiometry: 1.0
species: 539789

539789
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: cis-hexadec-9-enoyl-[acyl-carrier protein] (n-C16:1)_C27H49N2O8PRS

735054
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stoichiometry: 13.0
species: 539969

735029
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stoichiometry: 19.0
species: 539783

735042
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stoichiometry: 6.0
species: 539939

539530
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Dehydroshikimate_C7H7O5

541183
type: Reaction
kinetic law: 751582
product: 751546
reactant: 751522
name: phosphoribosyl-ATP pyrophosphatase
reactant: 751534
product: 751570
product: 751558
fast: false
reversible: false
notes: Abbreviation: R_PRATPP Synonyms: _0 EC Number: 3.6.1.31 SUBSYSTEM: Histidine Metabolism Equation: [c] : h2o + prbatp --> h + ppi + prbamp Confidence Level: 2 genes: LOCUS:BPLAN_200#ABBREVIATION:hisI#ECNUMBERS:3.5.4.19,-!-,3.6.1.31# proteins: NAME:Phosphoribosyl-ATP pyrophosphatase and -AMP cyclohydrolase#ABBREVIATION:HisI# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_200)

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value: 0.0

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value: 0.0

543475
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value: 999999.0

543473
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value: 0.0

751546
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stoichiometry: 1.0
species: 539783

751522
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stoichiometry: 1.0
species: 539779

751534
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stoichiometry: 1.0
species: 540025

751570
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stoichiometry: 1.0
species: 540024

540024
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _1-(5-Phosphoribosyl)-AMP_C15H19N5O14P2

751558
type: SpeciesReference
stoichiometry: 1.0
species: 540021

540757
type: Reaction
notes: Abbreviation: R_GLUt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: glu-L[e] + h[e] --> glu-L[c] + h[c] Confidence Level: 2 NCD genes: LOCUS:BPLAN_282#ABBREVIATION:gltP# proteins: NAME:DAACS, glutamate or aspartate symport#ABBREVIATION:GltP# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_282)
fast: false
product: 741980
product: 741992
kinetic law: 742004
reactant: 741968
name: L-glutamate transport via proton symport
reversible: false
reactant: 741956

741980
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stoichiometry: 1.0
species: 539760

741992
type: SpeciesReference
stoichiometry: 1.0
species: 539783

542548
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542546
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542545
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value: 999999.0

542543
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value: 0.0

741968
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species: 539784

539784
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: H+_H

741956
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stoichiometry: 1.0
species: 539761

539761
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Glutamate_C5H8NO4

539762
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Glycine_C2H5NO2

540150
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Glycolate_C2H3O3

540198
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Thiamin_C12H17N4OS

540107
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: UDP-N-acetylmuramate_C20H28N3O19P2

540033
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: O-Phospho-L-serine_C3H6NO6P

541237
type: Reaction
kinetic law: 752768
notes: Abbreviation: R_PYAM5PO Synonyms: _0 EC Number: 1.4.3.5 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : h2o + o2 + pyam5p --> h2o2 + nh4 + pydx5p Confidence Level: 2 NCD genes: LOCUS:BPLAN_583#ABBREVIATION:pdxH#ECNUMBERS:1.4.3.5# proteins: NAME:Pyridoxine 5-phosphate oxidase#ABBREVIATION:PdxH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_583)
name: pyridoxamine 5'-phosphate oxidase
reversible: false
product: 752744
reactant: 752719
product: 752731
reactant: 752695
product: 752756
reactant: 752707
fast: false

543605
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value: 0.0

543603
type: LocalParameter
value: 0.0

543601
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value: 999999.0

543599
type: LocalParameter
value: 0.0

752744
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stoichiometry: 1.0
species: 539970

752719
type: SpeciesReference
stoichiometry: 1.0
species: 540035

540035
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Pyridoxamine 5'-phosphate_C8H12N2O5P

752731
type: SpeciesReference
stoichiometry: 1.0
species: 539778

539778
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Hydrogen peroxide_H2O2

752695
type: SpeciesReference
stoichiometry: 1.0
species: 539779

752756
type: SpeciesReference
stoichiometry: 1.0
species: 540036

540036
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Pyridoxal 5'-phosphate_C8H8NO6P

752707
type: SpeciesReference
stoichiometry: 1.0
species: 539977

539977
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: O2_O2

541123
type: Reaction
fast: false
reactant: 750191
reactant: 750203
name: L-phenylalanine reversible transport via proton symport
reversible: true
product: 750227
product: 750215
notes: Abbreviation: R_PHEt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: h[e] + phe-L[e] <==> h[c] + phe-L[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 750239

750191
type: SpeciesReference
stoichiometry: 1.0
species: 539784

750203
type: SpeciesReference
stoichiometry: 1.0
species: 540008

540008
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Phenylalanine_C9H11NO2

750227
type: SpeciesReference
stoichiometry: 1.0
species: 540007

540007
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Phenylalanine_C9H11NO2

750215
type: SpeciesReference
stoichiometry: 1.0
species: 539783

543339
type: LocalParameter
value: 0.0

543337
type: LocalParameter
value: 0.0

543335
type: LocalParameter
value: 999999.0

543333
type: LocalParameter
value: -999999.0

540892
type: Reaction
reactant: 745019
notes: Abbreviation: R_LEUTA Synonyms: _2 EC Number: 2.6.1.42 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 4mop + glu-L <==> akg + leu-L Confidence Level: 2 genes: LOCUS:BPLAN_185#ABBREVIATION:ilvE#ECNUMBERS:2.6.1.42,-!-,2.6.1.2# LOCUS:BPLAN_298#ABBREVIATION:tyrB#ECNUMBERS:2.6.1.57# proteins: NAME:Branched-chain-amino-acid aminotransferase#ABBREVIATION:IlvE# NAME:Tyrosine aminotransferase#ABBREVIATION:TyrB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_298) or (BPLAN_185)
kinetic law: 745068
product: 745055
reactant: 745031
fast: false
name: leucine transaminase
reversible: true
product: 745043

745019
type: SpeciesReference
stoichiometry: 1.0
species: 539550

539550
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _4-Methyl-2-oxopentanoate_C6H9O3

542822
type: LocalParameter
value: 0.0

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type: LocalParameter
value: 0.0

542819
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value: 999999.0

542817
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value: -999999.0

745055
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stoichiometry: 1.0
species: 539932

539932
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Leucine_C6H13NO2

745031
type: SpeciesReference
stoichiometry: 1.0
species: 539760

745043
type: SpeciesReference
stoichiometry: 1.0
species: 539622

541198
type: Reaction
reactant: 751898
reversible: false
product: 751910
product: 751922
name: _3-phosphoshikimate 1-carboxyvinyltransferase
reactant: 751886
notes: Abbreviation: R_PSCVT Synonyms: _0 EC Number: 2.5.1.19 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : pep + skm5p --> 3psme + pi Confidence Level: 2 genes: LOCUS:BPLAN_236#ABBREVIATION:aroA#ECNUMBERS:2.5.1.19# proteins: NAME:_3-phosphoshikimate 1-carboxyvinyltransferase#ABBREVIATION:AroA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_236)
kinetic law: 751935
fast: false

751898
type: SpeciesReference
stoichiometry: 1.0
species: 540062

540062
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Shikimate 5-phosphate_C7H8O8P

751910
type: SpeciesReference
stoichiometry: 1.0
species: 539544

539544
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-O-(1-Carboxyvinyl)-3-phosphoshikimate_C10H9O10P

751922
type: SpeciesReference
stoichiometry: 1.0
species: 540013

751886
type: SpeciesReference
stoichiometry: 1.0
species: 540005

540005
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Phosphoenolpyruvate_C3H2O6P

543514
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value: 0.0

543512
type: LocalParameter
value: 0.0

543510
type: LocalParameter
value: 999999.0

543508
type: LocalParameter
value: 0.0

539599
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N2-Acetyl-L-ornithine_C7H14N2O3

539920
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: IMP_C10H11N4O8P

539496
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: meso-2,6-Diaminoheptanedioate_C7H14N2O4

539729
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Fructose 1-phosphate_C6H11O9P

539478
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _10-Formyltetrahydrofolate_C20H21N7O7

539556
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-4'-Phosphopantothenate_C9H15NO8P

540691
type: Reaction
kinetic law: 740525
product: 740513
product: 740501
reactant: 740489
notes: Abbreviation: R_FBAb Synonyms: _0 EC Number: 4.1.2.13 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : f1p <==> dhap + glyald Confidence Level: 2 genes: LOCUS:BPLAN_163#ABBREVIATION:fbaA#ECNUMBERS:4.1.2.13# proteins: NAME:fructose-bisphosphate aldolase II#ABBREVIATION:FbaA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_163)
fast: false
reversible: true
name: fructose-bisphosphate aldolaseB

542416
type: LocalParameter
value: 0.0

542415
type: LocalParameter
value: 0.0

542413
type: LocalParameter
value: 999999.0

542412
type: LocalParameter
value: -999999.0

740513
type: SpeciesReference
stoichiometry: 1.0
species: 539764

539764
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Glyceraldehyde_C3H6O3

740501
type: SpeciesReference
stoichiometry: 1.0
species: 539702

539702
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Dihydroxyacetone phosphate_C3H5O6P

740489
type: SpeciesReference
stoichiometry: 1.0
species: 539729

539947
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Methionine_C5H11NO2S

541447
type: Reaction
reactant: 757395
product: 757419
product: 757407
fast: false
kinetic law: 757431
reversible: true
notes: Abbreviation: R_VALTA Synonyms: _0 EC Number: 2.6.1.42 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : akg + val-L <==> 3mob + glu-L Confidence Level: 2 genes: LOCUS:BPLAN_185#ABBREVIATION:ilvE#ECNUMBERS:2.6.1.42,-!-,2.6.1.2# proteins: NAME:Branched-chain-amino-acid aminotransferase#ABBREVIATION:IlvE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_185)
name: valine transaminase
reactant: 757383

757395
type: SpeciesReference
stoichiometry: 1.0
species: 540122

540122
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Valine_C5H11NO2

757419
type: SpeciesReference
stoichiometry: 1.0
species: 539760

757407
type: SpeciesReference
stoichiometry: 1.0
species: 539536

539536
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Methyl-2-oxobutanoate_C5H7O3

544095
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value: 0.0

544093
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value: 0.0

544091
type: LocalParameter
value: 999999.0

544089
type: LocalParameter
value: -999999.0

757383
type: SpeciesReference
stoichiometry: 1.0
species: 539622

540430
type: Reaction
product: 736242
reactant: 736206
name: cytidine kinase (GTP)
product: 736230
product: 736254
reversible: false
notes: Abbreviation: R_CYTDK2 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : cytd + gtp --> cmp + gdp + h Confidence Level: 2 genes: LOCUS:BPLAN_106#ABBREVIATION:udk#ECNUMBERS:2.7.1.48# proteins: NAME:uridine/cytidine kinase#ABBREVIATION:Udk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_106)
kinetic law: 736266
reactant: 736218
fast: false

736242
type: SpeciesReference
stoichiometry: 1.0
species: 539754

736206
type: SpeciesReference
stoichiometry: 1.0
species: 539685

539685
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Cytidine_C9H13N3O5

736230
type: SpeciesReference
stoichiometry: 1.0
species: 539671

539671
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: CMP_C9H12N3O8P

736254
type: SpeciesReference
stoichiometry: 1.0
species: 539783

541904
type: LocalParameter
value: 0.0

541903
type: LocalParameter
value: 0.0

541901
type: LocalParameter
value: 999999.0

541900
type: LocalParameter
value: 0.0

736218
type: SpeciesReference
stoichiometry: 1.0
species: 539776

539776
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: GTP_C10H12N5O14P3

540958
type: Reaction
product: 746664
reactant: 746603
reactant: 746627
reactant: 746615
product: 746688
fast: false
kinetic law: 746700
reactant: 746640
product: 746652
notes: Abbreviation: R_NAMNPP Synonyms: _1 EC Number: 2.4.2.11 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + h2o + nac + prpp --> adp + nicrnt + pi + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_428#ABBREVIATION:pncB#ECNUMBERS:2.4.2.11# proteins: NAME:Nicotinate phosphoribosyltransferase#ABBREVIATION:PncB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_428)
reversible: false
name: nicotinic acid mononucleotide pyrophosphorylase
product: 746676

746664
type: SpeciesReference
stoichiometry: 1.0
species: 539973

539973
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Nicotinate D-ribonucleotide_C11H12NO9P

746603
type: SpeciesReference
stoichiometry: 1.0
species: 539659

746627
type: SpeciesReference
stoichiometry: 1.0
species: 539961

539961
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Nicotinate_C6H4NO2

746615
type: SpeciesReference
stoichiometry: 1.0
species: 539779

746688
type: SpeciesReference
stoichiometry: 1.0
species: 540021

542956
type: LocalParameter
value: 0.0

542955
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value: 0.0

542953
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value: 999999.0

542952
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value: 0.0

746640
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stoichiometry: 1.0
species: 540031

746652
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stoichiometry: 1.0
species: 539611

746676
type: SpeciesReference
stoichiometry: 1.0
species: 540013

541030
type: Reaction
kinetic law: 748137
name: _5'-nucleotidase (dGMP)
reversible: false
product: 748113
product: 748125
notes: Abbreviation: R_NTD8 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dgmp + h2o --> dgsn + pi Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 748089
reactant: 748101
fast: false

543122
type: LocalParameter
value: 0.0

543120
type: LocalParameter
value: 0.0

543118
type: LocalParameter
value: 999999.0

543116
type: LocalParameter
value: 0.0

748113
type: SpeciesReference
stoichiometry: 1.0
species: 539700

539700
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Deoxyguanosine_C10H13N5O4

748125
type: SpeciesReference
stoichiometry: 1.0
species: 540013

748089
type: SpeciesReference
stoichiometry: 1.0
species: 539699

539699
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dGMP_C10H12N5O7P

748101
type: SpeciesReference
stoichiometry: 1.0
species: 539779

541387
type: Reaction
product: 755994
notes: Abbreviation: R_TYRTA Synonyms: _13 EC Number: 2.6.1.5 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : akg + tyr-L <==> 34hpp + glu-L Confidence Level: 2 genes: LOCUS:BPLAN_285#ABBREVIATION:aspC#ECNUMBERS:2.6.1.1# LOCUS:BPLAN_298#ABBREVIATION:tyrB#ECNUMBERS:2.6.1.57# proteins: NAME:Tyrosine aminotransferase#ABBREVIATION:TyrB# NAME:aspartate aminotransferase#ABBREVIATION:AspC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_298) or (BPLAN_285)
reactant: 755969
name: tyrosine transaminase
reversible: true
kinetic law: 756006
fast: false
product: 755981
reactant: 755956

755994
type: SpeciesReference
stoichiometry: 1.0
species: 539760

755969
type: SpeciesReference
stoichiometry: 1.0
species: 540096

543955
type: LocalParameter
value: 0.0

543953
type: LocalParameter
value: 0.0

543951
type: LocalParameter
value: 999999.0

543949
type: LocalParameter
value: -999999.0

755981
type: SpeciesReference
stoichiometry: 1.0
species: 539521

539521
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-(4-Hydroxyphenyl)pyruvate_C9H7O4

755956
type: SpeciesReference
stoichiometry: 1.0
species: 539622

540631
type: Reaction
kinetic law: 739776
product: 739764
reactant: 739752
notes: Abbreviation: R_EX_met_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : met-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Methionine exchange

542296
type: LocalParameter
value: 0.0

542295
type: LocalParameter
value: 0.0

542293
type: LocalParameter
value: 999999.0

542292
type: LocalParameter
value: 0.0

739764
type: SpeciesReference
stoichiometry: 1.0
species: 540161

540161
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Methionine_C5H11NO2S

739752
type: SpeciesReference
stoichiometry: 1.0
species: 539947

541315
type: Reaction
name: succinate transport via proton symport (2 H)
reactant: 754389
reactant: 754377
kinetic law: 754425
fast: false
product: 754401
product: 754413
notes: Abbreviation: R_SUCCt2_2 Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: (2) h[e] + succ[e] --> (2) h[c] + succ[c] Confidence Level: 2 JLR genes: LOCUS:BPLAN_282#ABBREVIATION:dctA# proteins: NAME:C4-dicarboxylate transporter#ABBREVIATION:DctA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_282)
reversible: false

754389
type: SpeciesReference
stoichiometry: 1.0
species: 540077

540077
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Succinate_C4H4O4

754377
type: SpeciesReference
stoichiometry: 2.0
species: 539784

543787
type: LocalParameter
value: 0.0

543785
type: LocalParameter
value: 0.0

543783
type: LocalParameter
value: 999999.0

543781
type: LocalParameter
value: 0.0

754401
type: SpeciesReference
stoichiometry: 2.0
species: 539783

754413
type: SpeciesReference
stoichiometry: 1.0
species: 540076

539653
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Aspartate_C4H6NO4

539657
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Aspartate 4-semialdehyde_C4H7NO3

541186
type: Reaction
fast: false
notes: Abbreviation: R_PRFGS Synonyms: _0 EC Number: 6.3.5.3 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : atp + fgam + gln-L + h2o --> adp + fpram + glu-L + h + pi Confidence Level: 2 genes: LOCUS:BPLAN_153#ABBREVIATION:purL#ECNUMBERS:6.3.5.3# proteins: NAME:Phosphoribosylformylglycineamide synthetase#ABBREVIATION:PurL# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_153)
product: 751666
product: 751642
reactant: 751630
name: phosphoribosylformylglycinamidine synthase
reversible: false
reactant: 751606
reactant: 751618
product: 751679
kinetic law: 751703
product: 751654
reactant: 751594
product: 751691

751666
type: SpeciesReference
stoichiometry: 1.0
species: 539760

751642
type: SpeciesReference
stoichiometry: 1.0
species: 539611

751630
type: SpeciesReference
stoichiometry: 1.0
species: 539779

751606
type: SpeciesReference
stoichiometry: 1.0
species: 539737

751618
type: SpeciesReference
stoichiometry: 1.0
species: 539756

751679
type: SpeciesReference
stoichiometry: 1.0
species: 539783

543486
type: LocalParameter
value: 0.0

543484
type: LocalParameter
value: 0.0

543482
type: LocalParameter
value: 999999.0

543480
type: LocalParameter
value: 0.0

751654
type: SpeciesReference
stoichiometry: 1.0
species: 539741

539741
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine_C8H15N3O8P

751594
type: SpeciesReference
stoichiometry: 1.0
species: 539659

751691
type: SpeciesReference
stoichiometry: 1.0
species: 540013

540487
type: Reaction
kinetic law: 737511
product: 737498
reversible: false
product: 737460
reactant: 737436
reactant: 737448
notes: Abbreviation: R_DHNAOT Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : dhna + octdp --> 2dmmq8 + co2 + h + ppi Confidence Level: 2 EC 2.5.1-; menA Reaction is uncharged the loss of 2H (conversion from quinol to quinone form is thought to be spontaneous). genes: LOCUS:BPLAN_368#ABBREVIATION:menA#ECNUMBERS:2.5.1.-# proteins: NAME:_1,4 dihydroxy-2-napthoate octaprenyltransferase#ABBREVIATION:MenA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_368)
product: 737486
fast: false
product: 737473
name: _1,4-dihydroxy-2-naphthoate octaprenyltransferase

542009
type: LocalParameter
value: 0.0

542007
type: LocalParameter
value: 0.0

542006
type: LocalParameter
value: 999999.0

542004
type: LocalParameter
value: 0.0

737498
type: SpeciesReference
stoichiometry: 1.0
species: 540021

737460
type: SpeciesReference
stoichiometry: 1.0
species: 539504

539504
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Demethylmenaquinone 8_C50H70O2

737436
type: SpeciesReference
stoichiometry: 1.0
species: 539706

539706
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _1,4-Dihydroxy-2-naphthoate_C11H7O4

737448
type: SpeciesReference
stoichiometry: 1.0
species: 539987

539987
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: all-trans-Octaprenyl diphosphate_C40H65O7P2

737486
type: SpeciesReference
stoichiometry: 1.0
species: 539783

737473
type: SpeciesReference
stoichiometry: 1.0
species: 539673

539771
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Glycolate_C2H3O3

540472
type: Reaction
kinetic law: 737123
product: 737111
product: 737099
reactant: 737087
notes: Abbreviation: R_DHAD2 Synonyms: _0 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 23dhmp --> 3mop + h2o Confidence Level: 2 genes: LOCUS:BPLAN_083#ABBREVIATION:ilvD#ECNUMBERS:4.2.1.9# proteins: NAME:dihidroxy acid dehydratase#ABBREVIATION:IlvD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_083)
fast: false
reversible: false
name: Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate)

541981
type: LocalParameter
value: 0.0

541980
type: LocalParameter
value: 0.0

541978
type: LocalParameter
value: 999999.0

541977
type: LocalParameter
value: 0.0

737111
type: SpeciesReference
stoichiometry: 1.0
species: 539779

737099
type: SpeciesReference
stoichiometry: 1.0
species: 539538

539538
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (S)-3-Methyl-2-oxopentanoate_C6H9O3

737087
type: SpeciesReference
stoichiometry: 1.0
species: 539488

539488
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (R)-2,3-Dihydroxy-3-methylpentanoate_C6H11O4

540355
type: Reaction
name: L-aspartate transport in via proton symport
reactant: 733651
product: 733675
product: 733663
reversible: false
notes: Abbreviation: R_ASPt2 Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: asp-L[e] + h[e] --> asp-L[c] + h[c] Confidence Level: 2 genes: LOCUS:BPLAN_282#ABBREVIATION:gltP# proteins: NAME:DAACS, glutamate or aspartate symport#ABBREVIATION:GltP# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_282)
reactant: 733639
kinetic law: 733687
fast: false

733651
type: SpeciesReference
stoichiometry: 1.0
species: 539784

733675
type: SpeciesReference
stoichiometry: 1.0
species: 539783

733663
type: SpeciesReference
stoichiometry: 1.0
species: 539653

733639
type: SpeciesReference
stoichiometry: 1.0
species: 539655

539655
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Aspartate_C4H6NO4

541754
type: LocalParameter
value: 0.0

541753
type: LocalParameter
value: 0.0

541751
type: LocalParameter
value: 999999.0

541750
type: LocalParameter
value: 0.0

541360
type: Reaction
fast: false
kinetic law: 755451
name: thymidylate synthase
product: 755427
notes: Abbreviation: R_TMDS Synonyms: _4 EC Number: 2.1.1.45 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dump + mlthf --> dhf + dtmp Confidence Level: 2 genes: LOCUS:BPLAN_141#ABBREVIATION:thyA#ECNUMBERS:2.1.1.45# proteins: NAME:thymidylate synthetase#ABBREVIATION:ThyA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_141)
reactant: 755415
reversible: false
product: 755439
reactant: 755403

543892
type: LocalParameter
value: 0.0

543890
type: LocalParameter
value: 0.0

543888
type: LocalParameter
value: 999999.0

543886
type: LocalParameter
value: 0.0

755427
type: SpeciesReference
stoichiometry: 1.0
species: 539704

539704
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _7,8-Dihydrofolate_C19H19N7O6

755415
type: SpeciesReference
stoichiometry: 1.0
species: 539952

539952
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5,10-Methylenetetrahydrofolate_C20H21N7O6

755439
type: SpeciesReference
stoichiometry: 1.0
species: 539719

755403
type: SpeciesReference
stoichiometry: 1.0
species: 539722

539722
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dUMP_C9H11N2O8P

541045
type: Reaction
product: 748463
notes: Abbreviation: R_NTPP4 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : ctp + h2o --> cmp + h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_237#ABBREVIATION:mazG# proteins: NAME:Nucleotide triphosphate pyrophosphohydrolase#ABBREVIATION:MazG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_237)
product: 748476
reactant: 748439
reactant: 748427
name: Nucleoside triphosphate pyrophosphorylase (ctp)
kinetic law: 748488
product: 748451
reversible: false
fast: false

748463
type: SpeciesReference
stoichiometry: 1.0
species: 539783

748476
type: SpeciesReference
stoichiometry: 1.0
species: 540021

748439
type: SpeciesReference
stoichiometry: 1.0
species: 539779

748427
type: SpeciesReference
stoichiometry: 1.0
species: 539681

543157
type: LocalParameter
value: 0.0

543155
type: LocalParameter
value: 0.0

543153
type: LocalParameter
value: 999999.0

543151
type: LocalParameter
value: 0.0

748451
type: SpeciesReference
stoichiometry: 1.0
species: 539671

539725
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dUTP_C9H11N2O14P3

540289
type: Reaction
product: 732153
reactant: 732129
notes: Abbreviation: R_AICART Synonyms: _0 EC Number: 2.1.2.3 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : 10fthf + aicar --> fprica + thf Confidence Level: 2 genes: LOCUS:BPLAN_159#ABBREVIATION:purH#ECNUMBERS:3.5.4.10,-!-,2.1.2.3# proteins: NAME:AICAR transformylase and IMP cyclohydrolase#ABBREVIATION:PurH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_159)
kinetic law: 732177
product: 732165
reversible: false
fast: false
reactant: 732141
name: phosphoribosylaminoimidazolecarboxamide formyltransferase

732153
type: SpeciesReference
stoichiometry: 1.0
species: 539742

539742
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-Formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide_C10H13N4O9P

732129
type: SpeciesReference
stoichiometry: 1.0
species: 539478

541622
type: LocalParameter
value: 0.0

541621
type: LocalParameter
value: 0.0

541619
type: LocalParameter
value: 999999.0

541618
type: LocalParameter
value: 0.0

732165
type: SpeciesReference
stoichiometry: 1.0
species: 540083

540083
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5,6,7,8-Tetrahydrofolate_C19H21N7O6

732141
type: SpeciesReference
stoichiometry: 1.0
species: 539618

539618
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-Amino-1-(5-Phospho-D-ribosyl)imidazole-4-carboxamide_C9H13N4O8P

541294
type: Reaction
reactant: 753906
notes: Abbreviation: R_SHCHCS2 Synonyms: _1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : ichor + ssaltpp --> 2shchc + pyr + thmpp Confidence Level: 2 JLR genes: LOCUS:BPLAN_577#ABBREVIATION:menD#ECNUMBERS:4.1.1.71,-!-,2.2.1.9# proteins: NAME:bifunctional 2-oxoglutarate decarboxylase/2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase#ABBREVIATION:MenD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_577)
product: 753942
name: _2-succinyl-6-hydroxy-2,4-cyclohexadiene 1-carboxylate synthase
kinetic law: 753954
reversible: false
fast: false
reactant: 753894
product: 753930
product: 753918

753906
type: SpeciesReference
stoichiometry: 1.0
species: 540074

540074
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Succinate semialdehyde-thiamin diphosphate anion_C16H21N4O10P2S

753942
type: SpeciesReference
stoichiometry: 1.0
species: 540086

540086
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Thiamine diphosphate_C12H16N4O7P2S

543738
type: LocalParameter
value: 0.0

543736
type: LocalParameter
value: 0.0

543734
type: LocalParameter
value: 999999.0

543732
type: LocalParameter
value: 0.0

753894
type: SpeciesReference
stoichiometry: 1.0
species: 539797

753930
type: SpeciesReference
stoichiometry: 1.0
species: 540038

753918
type: SpeciesReference
stoichiometry: 1.0
species: 539520

539520
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate_C11H10O6

541126
type: Reaction
reactant: 750252
name: phenylalanine transaminase
kinetic law: 750302
reactant: 750264
fast: false
reversible: true
notes: Abbreviation: R_PHETA1 Synonyms: _5 EC Number: 2.6.1.58 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : akg + phe-L <==> glu-L + phpyr Confidence Level: 2 genes: LOCUS:BPLAN_285#ABBREVIATION:aspC#ECNUMBERS:2.6.1.1# LOCUS:BPLAN_185#ABBREVIATION:ilvE#ECNUMBERS:2.6.1.42,-!-,2.6.1.2# LOCUS:BPLAN_298#ABBREVIATION:tyrB#ECNUMBERS:2.6.1.57# proteins: NAME:Tyrosine aminotransferase#ABBREVIATION:TyrB# NAME:Branched-chain-amino-acid aminotransferase#ABBREVIATION:IlvE# NAME:aspartate aminotransferase#ABBREVIATION:AspC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_185) or (BPLAN_298) or (BPLAN_285)
product: 750289
product: 750276

750252
type: SpeciesReference
stoichiometry: 1.0
species: 539622

543346
type: LocalParameter
value: 0.0

543344
type: LocalParameter
value: 0.0

543342
type: LocalParameter
value: 999999.0

543340
type: LocalParameter
value: -999999.0

750264
type: SpeciesReference
stoichiometry: 1.0
species: 540007

750289
type: SpeciesReference
stoichiometry: 1.0
species: 540011

540011
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Phenylpyruvate_C9H7O3

750276
type: SpeciesReference
stoichiometry: 1.0
species: 539760

540340
type: Reaction
kinetic law: 733325
product: 733313
product: 733300
reactant: 733288
notes: Abbreviation: R_ARGSL Synonyms: _0 EC Number: 4.3.2.1 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : argsuc --> arg-L + fum Confidence Level: 2 genes: LOCUS:BPLAN_276#ABBREVIATION:argH#ECNUMBERS:4.3.2.1# proteins: NAME:argininosuccinate lyase#ABBREVIATION:ArgH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_276)
fast: false
reversible: false
name: argininosuccinate lyase

541724
type: LocalParameter
value: 0.0

541723
type: LocalParameter
value: 0.0

541721
type: LocalParameter
value: 999999.0

541720
type: LocalParameter
value: 0.0

733313
type: SpeciesReference
stoichiometry: 1.0
species: 539747

733300
type: SpeciesReference
stoichiometry: 1.0
species: 539643

539643
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Arginine_C6H15N4O2

733288
type: SpeciesReference
stoichiometry: 1.0
species: 539647

539647
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N(omega)-(L-Arginino)succinate_C10H17N4O6

540098
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476

541432
type: Reaction
name: urease
reactant: 757069
reactant: 757045
product: 757093
product: 757081
notes: Abbreviation: R_UREA Synonyms: _0 EC Number: 3.5.1.5 Equation: [c] : (2) h + h2o + urea --> co2 + (2) nh4 Confidence Level: 4 genes: LOCUS:BPLAN_137#ABBREVIATION:ureAB#ECNUMBERS:3.5.1.5# LOCUS:BPLAN_136#ABBREVIATION:ureC#ECNUMBERS:3.5.1.5# proteins: NAME:Urease, alpha subunit#ABBREVIATION:UreC# NAME:Urease beta gamma subunit#ABBREVIATION:UreAB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_137) and (BPLAN_136)
kinetic law: 757105
reversible: false
reactant: 757057
fast: false

757069
type: SpeciesReference
stoichiometry: 1.0
species: 540117

757045
type: SpeciesReference
stoichiometry: 2.0
species: 539783

757093
type: SpeciesReference
stoichiometry: 2.0
species: 539970

757081
type: SpeciesReference
stoichiometry: 1.0
species: 539673

544060
type: LocalParameter
value: 0.0

544058
type: LocalParameter
value: 0.0

544056
type: LocalParameter
value: 999999.0

544054
type: LocalParameter
value: 0.0

757057
type: SpeciesReference
stoichiometry: 1.0
species: 539779

540274
type: Reaction
kinetic law: 731813
product: 731801
product: 731789
reactant: 731777
notes: Abbreviation: R_ADSL2r Synonyms: _0 EC Number: 4.3.2.2 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : 25aics --> aicar + fum Confidence Level: 2 JLR- added reversible form of ADSL2 genes: LOCUS:BPLAN_152#ABBREVIATION:purB#ECNUMBERS:4.3.2.2# proteins: NAME:Adenylosuccinate lyase#ABBREVIATION:PurB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_152)
fast: false
reversible: false
name: adenylosuccinate lyase

541593
type: LocalParameter
value: 0.0

541591
type: LocalParameter
value: 0.0

541590
type: LocalParameter
value: 999999.0

541588
type: LocalParameter
value: 0.0

731801
type: SpeciesReference
stoichiometry: 1.0
species: 539747

731789
type: SpeciesReference
stoichiometry: 1.0
species: 539618

731777
type: SpeciesReference
stoichiometry: 1.0
species: 539490

539490
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate_C13H15N4O12P

540084
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Thiamin_C12H17N4OS

539980
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: O2_O2

539708
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (S)-Dihydroorotate_C5H5N2O4

539616
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)dihydropteridine triphosphate_C9H12N5O13P3

541300
type: Reaction
reactant: 754050
kinetic law: 754098
reversible: false
product: 754074
name: shikimate kinase
notes: Abbreviation: R_SHKK Synonyms: _0 EC Number: 2.7.1.71 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : atp + skm --> adp + h + skm5p Confidence Level: 2 genes: LOCUS:BPLAN_210#ABBREVIATION:aroK#ECNUMBERS:2.7.1.71# proteins: NAME:Skikimic acid kinase I#ABBREVIATION:AroK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_210)
product: 754062
reactant: 754038
fast: false
product: 754086

754050
type: SpeciesReference
stoichiometry: 1.0
species: 540065

540065
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Shikimate_C7H9O5

543752
type: LocalParameter
value: 0.0

543750
type: LocalParameter
value: 0.0

543748
type: LocalParameter
value: 999999.0

543746
type: LocalParameter
value: 0.0

754074
type: SpeciesReference
stoichiometry: 1.0
species: 539783

754062
type: SpeciesReference
stoichiometry: 1.0
species: 539611

754038
type: SpeciesReference
stoichiometry: 1.0
species: 539659

754086
type: SpeciesReference
stoichiometry: 1.0
species: 540062

540004
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Phosphatidylethanolamine (Blattabacterium Periplaneta americana)_C1936H3748N50O400P50

539926
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Isopentenyl diphosphate_C5H9O7P2

540967
type: Reaction
reactant: 746833
kinetic law: 746881
name: nucleoside-diphosphate kinase (ATP:UDP)
product: 746869
product: 746857
fast: false
notes: Abbreviation: R_NDPK2 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + udp <==> adp + utp Confidence Level: 2 Many nucleoside diphosphates (eight described) can act as acceptors. While many ribo- and deoxyribonucleoside triphosphates can act as donors, only ATP is chosen as a donor to minimize the number of total reactions. genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)
reactant: 746845
reversible: true

746833
type: SpeciesReference
stoichiometry: 1.0
species: 539659

542978
type: LocalParameter
value: 0.0

542976
type: LocalParameter
value: 0.0

542974
type: LocalParameter
value: 999999.0

542972
type: LocalParameter
value: -999999.0

746869
type: SpeciesReference
stoichiometry: 1.0
species: 540121

540121
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: UTP_C9H11N2O15P3

746857
type: SpeciesReference
stoichiometry: 1.0
species: 539611

746845
type: SpeciesReference
stoichiometry: 1.0
species: 540111

540111
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: UDP_C9H11N2O12P2

540565
type: Reaction
kinetic law: 738979
product: 738967
reactant: 738955
notes: Abbreviation: R_EX_co2_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : co2 <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: CO2 exchange

542164
type: LocalParameter
value: 0.0

542163
type: LocalParameter
value: 0.0

542161
type: LocalParameter
value: 999999.0

542160
type: LocalParameter
value: -999999.0

738967
type: SpeciesReference
stoichiometry: 1.0
species: 540136

540136
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: CO2_CO2

738955
type: SpeciesReference
stoichiometry: 1.0
species: 539675

539675
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: CO2_CO2

540922
type: Reaction
kinetic law: 745792
product: 745780
reactant: 745767
reactant: 745755
notes: Abbreviation: R_MTHFC Synonyms: _0 EC Number: 3.5.4.9 SUBSYSTEM: Folate Metabolism Equation: [c] : h2o + methf <==> 10fthf Confidence Level: 2 genes: LOCUS:BPLAN_198#ABBREVIATION:folD#ECNUMBERS:1.5.1.5,-!-,3.5.4.9# proteins: NAME:Methylene-tetrahydrofolate dehydrogenase#ABBREVIATION:FolD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_198)
fast: false
reversible: true
name: methenyltetrahydrofolate cyclohydrolase

542882
type: LocalParameter
value: 0.0

542880
type: LocalParameter
value: 0.0

542879
type: LocalParameter
value: 999999.0

542877
type: LocalParameter
value: -999999.0

745780
type: SpeciesReference
stoichiometry: 1.0
species: 539478

745767
type: SpeciesReference
stoichiometry: 1.0
species: 539948

539948
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5,10-Methenyltetrahydrofolate_C20H20N7O6

745755
type: SpeciesReference
stoichiometry: 1.0
species: 539779

539963
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Nicotinate_C6H4NO2

540041
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: alpha-D-Ribose 5-phosphate_C5H9O8P

539738
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: FMN_C17H19N4O9P

540262
type: Reaction
product: 731573
reactant: 731537
fast: false
notes: Abbreviation: R_ADK3 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : amp + gtp <==> adp + gdp Confidence Level: 2 JLR genes: LOCUS:BPLAN_420#ABBREVIATION:adk#ECNUMBERS:2.7.4.3# proteins: NAME:Adenylate kinase#ABBREVIATION:Adk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_420)
kinetic law: 731585
reversible: true
name: adentylate kinase (GTP)
product: 731561
reactant: 731549

731573
type: SpeciesReference
stoichiometry: 1.0
species: 539754

731537
type: SpeciesReference
stoichiometry: 1.0
species: 539638

541569
type: LocalParameter
value: 0.0

541567
type: LocalParameter
value: 0.0

541566
type: LocalParameter
value: 999999.0

541564
type: LocalParameter
value: -999999.0

731561
type: SpeciesReference
stoichiometry: 1.0
species: 539611

731549
type: SpeciesReference
stoichiometry: 1.0
species: 539776

540646
type: Reaction
kinetic law: 739958
product: 739946
reactant: 739934
notes: Abbreviation: R_EX_phe_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : phe-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Phenylalanine exchange

542326
type: LocalParameter
value: 0.0

542325
type: LocalParameter
value: 0.0

542323
type: LocalParameter
value: 999999.0

542322
type: LocalParameter
value: 0.0

739946
type: SpeciesReference
stoichiometry: 1.0
species: 540174

540174
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Phenylalanine_C9H11NO2

739934
type: SpeciesReference
stoichiometry: 1.0
species: 540008

540952
type: Reaction
reversible: false
product: 746456
product: 746468
fast: false
kinetic law: 746492
notes: Abbreviation: R_NADK Synonyms: _0 EC Number: 2.7.1.23 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + nad --> adp + h + nadp Confidence Level: 2 genes: LOCUS:BPLAN_548#ABBREVIATION:ppnK#ECNUMBERS:2.7.1.23# proteins: NAME:NAD kinase#ABBREVIATION:ppnK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_548)
reactant: 746432
reactant: 746444
product: 746480
name: NAD kinase

746456
type: SpeciesReference
stoichiometry: 1.0
species: 539611

746468
type: SpeciesReference
stoichiometry: 1.0
species: 539783

542944
type: LocalParameter
value: 0.0

542942
type: LocalParameter
value: 0.0

542940
type: LocalParameter
value: 999999.0

542938
type: LocalParameter
value: 0.0

746432
type: SpeciesReference
stoichiometry: 1.0
species: 539659

746444
type: SpeciesReference
stoichiometry: 1.0
species: 539964

746480
type: SpeciesReference
stoichiometry: 1.0
species: 539967

540835
type: Reaction
kinetic law: 743697
product: 743685
product: 743673
reactant: 743661
notes: Abbreviation: R_IGPDH Synonyms: _0 EC Number: 4.2.1.19 SUBSYSTEM: Histidine Metabolism Equation: [c] : eig3p --> h2o + imacp Confidence Level: 2 genes: LOCUS:BPLAN_204#ABBREVIATION:hisB#ECNUMBERS:3.1.3.15,-!-,4.2.1.19# proteins: NAME:Imidazoleglycerol phosphate dehydratase and Histidinol phosphatase#ABBREVIATION:HisB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_204)
fast: false
reversible: false
name: imidazoleglycerol-phosphate dehydratase

542705
type: LocalParameter
value: 0.0

542703
type: LocalParameter
value: 0.0

542701
type: LocalParameter
value: 999999.0

542699
type: LocalParameter
value: 0.0

743685
type: SpeciesReference
stoichiometry: 1.0
species: 539919

539919
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-(Imidazol-4-yl)-2-oxopropyl phosphate_C6H7N2O5P

743673
type: SpeciesReference
stoichiometry: 1.0
species: 539779

743661
type: SpeciesReference
stoichiometry: 1.0
species: 539728

539728
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate_C6H9N2O6P

540433
type: Reaction
reactant: 736278
notes: Abbreviation: R_CYTK1 Synonyms: _0 EC Number: 2.7.4.14 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + cmp <==> adp + cdp Confidence Level: 2 genes: LOCUS:BPLAN_575#ABBREVIATION:cmk#ECNUMBERS:2.7.4.14# proteins: NAME:cytidine monophosphate kinase#ABBREVIATION:Cmk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_575)
product: 736314
kinetic law: 736326
product: 736302
fast: false
name: cytidylate kinase (CMP)
reactant: 736290
reversible: true

736278
type: SpeciesReference
stoichiometry: 1.0
species: 539659

736314
type: SpeciesReference
stoichiometry: 1.0
species: 539663

539663
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: CDP_C9H12N3O11P2

541910
type: LocalParameter
value: 0.0

541908
type: LocalParameter
value: 0.0

541907
type: LocalParameter
value: 999999.0

541905
type: LocalParameter
value: -999999.0

736302
type: SpeciesReference
stoichiometry: 1.0
species: 539611

736290
type: SpeciesReference
stoichiometry: 1.0
species: 539671

540937
type: Reaction
notes: Abbreviation: R_NADDP Synonyms: _0 EC Number: 3.6.1.22 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : h2o + nad --> amp + (2) h + nmn Confidence Level: 2 See also EC 3.6.1.9 genes: LOCUS:BPLAN_307#ABBREVIATION:ligA#ECNUMBERS:6.5.1.2# proteins: NAME:DNA ligase#ABBREVIATION:Lig# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_307)
product: 746095
reactant: 746047
product: 746071
name: NAD diphosphatase
kinetic law: 746107
fast: false
reversible: false
reactant: 746059
product: 746083

746095
type: SpeciesReference
stoichiometry: 1.0
species: 539974

539974
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: NMN_C11H14N2O8P

746047
type: SpeciesReference
stoichiometry: 1.0
species: 539779

746071
type: SpeciesReference
stoichiometry: 1.0
species: 539638

542912
type: LocalParameter
value: 0.0

542910
type: LocalParameter
value: 0.0

542909
type: LocalParameter
value: 999999.0

542907
type: LocalParameter
value: 0.0

746059
type: SpeciesReference
stoichiometry: 1.0
species: 539964

746083
type: SpeciesReference
stoichiometry: 2.0
species: 539783

539942
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Malate_C4H4O5

541195
type: Reaction
name: phosphoribosylpyrophosphate synthetase
product: 751850
product: 751838
reactant: 751813
kinetic law: 751874
fast: false
product: 751862
notes: Abbreviation: R_PRPPS Synonyms: _0 EC Number: 2.7.6.1 SUBSYSTEM: Histidine Metabolism Equation: [c] : atp + r5p --> amp + h + prpp Confidence Level: 2 genes: LOCUS:BPLAN_142#ABBREVIATION:prsA#ECNUMBERS:2.7.6.1# proteins: NAME:phosphoribosylpyrophosphate synthetase#ABBREVIATION:PrsA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_142)
reactant: 751825
reversible: false

751850
type: SpeciesReference
stoichiometry: 1.0
species: 539783

751838
type: SpeciesReference
stoichiometry: 1.0
species: 539638

751813
type: SpeciesReference
stoichiometry: 1.0
species: 539659

543507
type: LocalParameter
value: 0.0

543505
type: LocalParameter
value: 0.0

543503
type: LocalParameter
value: 999999.0

543501
type: LocalParameter
value: 0.0

751862
type: SpeciesReference
stoichiometry: 1.0
species: 540031

751825
type: SpeciesReference
stoichiometry: 1.0
species: 540041

540068
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N-Succinyl-LL-2,6-diaminoheptanedioate_C11H16N2O7

541150
type: Reaction
fast: false
reactant: 750738
reversible: false
product: 750762
kinetic law: 750774
notes: Abbreviation: R_PPCDC Synonyms: _0 EC Number: 4.1.1.36 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 4ppcys + h --> co2 + pan4p Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 750750
reactant: 750725
name: phosphopantothenoylcysteine decarboxylase

750738
type: SpeciesReference
stoichiometry: 1.0
species: 539783

750762
type: SpeciesReference
stoichiometry: 1.0
species: 540001

540001
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Pantetheine 4'-phosphate_C11H21N2O7PS

543402
type: LocalParameter
value: 0.0

543400
type: LocalParameter
value: 0.0

543398
type: LocalParameter
value: 999999.0

543396
type: LocalParameter
value: 0.0

750750
type: SpeciesReference
stoichiometry: 1.0
species: 539673

750725
type: SpeciesReference
stoichiometry: 1.0
species: 539558

539558
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N-((R)-4-Phosphopantothenoyl)-L-cysteine_C12H20N2O9PS

540769
type: Reaction
kinetic law: 742235
product: 742223
reactant: 742211
notes: Abbreviation: R_GLYCt Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: glyc[c] <==> glyc[e] Confidence Level: 2 NCD genes: LOCUS:BPLAN_180#ABBREVIATION:glpF# proteins: NAME:MIP channel, glycerol diffusion#ABBREVIATION:GlpF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_180)
fast: false
reversible: true
name: glycerol transport via channel

542572
type: LocalParameter
value: 0.0

542570
type: LocalParameter
value: 0.0

542569
type: LocalParameter
value: 999999.0

542567
type: LocalParameter
value: -999999.0

742223
type: SpeciesReference
stoichiometry: 1.0
species: 539769

539769
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Glycerol_C3H8O3

742211
type: SpeciesReference
stoichiometry: 1.0
species: 539768

539768
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Glycerol_C3H8O3

539750
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Glucosamine 1-phosphate_C6H13NO8P

540820
type: Reaction
kinetic law: 743401
product: 743389
product: 743365
name: homoserine kinase
fast: false
reactant: 743341
product: 743377
reversible: false
reactant: 743353
notes: Abbreviation: R_HSK Synonyms: _0 EC Number: 2.7.1.39 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : atp + hom-L --> adp + h + phom Confidence Level: 2 genes: LOCUS:BPLAN_139#ABBREVIATION:thrB#ECNUMBERS:2.7.1.39# proteins: NAME:Homoserine kinase#ABBREVIATION:ThrB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_139)

542674
type: LocalParameter
value: 0.0

542672
type: LocalParameter
value: 0.0

542671
type: LocalParameter
value: 999999.0

542669
type: LocalParameter
value: 0.0

743389
type: SpeciesReference
stoichiometry: 1.0
species: 540010

540010
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: O-Phospho-L-homoserine_C4H8NO6P

743365
type: SpeciesReference
stoichiometry: 1.0
species: 539611

743341
type: SpeciesReference
stoichiometry: 1.0
species: 539659

743377
type: SpeciesReference
stoichiometry: 1.0
species: 539783

743353
type: SpeciesReference
stoichiometry: 1.0
species: 539795

541417
type: Reaction
kinetic law: 756768
reactant: 756720
reactant: 756732
name: Undecaprenyl diphosphate synthase
notes: Abbreviation: R_UDCPDPS Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : frdp + (8) ipdp --> (8) ppi + udcpdp Confidence Level: 2 tv genes: LOCUS:BPLAN_547#ABBREVIATION:ispU#ECNUMBERS:2.5.1.31# proteins: NAME:Undecaprenyl diphosphate synthase#ABBREVIATION:UppS# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_547)
product: 756756
product: 756744
fast: false
reversible: false

544025
type: LocalParameter
value: 0.0

544023
type: LocalParameter
value: 0.0

544021
type: LocalParameter
value: 999999.0

544019
type: LocalParameter
value: 0.0

756720
type: SpeciesReference
stoichiometry: 1.0
species: 539743

539743
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Farnesyl diphosphate_C15H25O7P2

756732
type: SpeciesReference
stoichiometry: 8.0
species: 539926

756756
type: SpeciesReference
stoichiometry: 1.0
species: 540108

540108
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Undecaprenyl diphosphate_C55H89O7P2

756744
type: SpeciesReference
stoichiometry: 8.0
species: 540021

540186
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Proline_C5H9NO2

540448
type: Reaction
kinetic law: 736615
product: 736603
reactant: 736591
notes: Abbreviation: R_DAPE Synonyms: _0 EC Number: 5.1.1.7 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : 26dap-LL <==> 26dap-M Confidence Level: 2 genes: LOCUS:BPLAN_245#ABBREVIATION:dapF#ECNUMBERS:5.1.1.7# proteins: NAME:Diaminopimelate epimerase#ABBREVIATION:DapF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_245)
fast: false
reversible: true
name: diaminopimelate epimerase

541937
type: LocalParameter
value: 0.0

541936
type: LocalParameter
value: 0.0

541934
type: LocalParameter
value: 999999.0

541933
type: LocalParameter
value: -999999.0

736603
type: SpeciesReference
stoichiometry: 1.0
species: 539496

736591
type: SpeciesReference
stoichiometry: 1.0
species: 539494

539494
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: LL-2,6-Diaminoheptanedioate_C7H14N2O4

540805
type: Reaction
product: 743050
reversible: false
reactant: 743013
kinetic law: 743062
product: 743037
fast: false
name: histidinol dehydrogenase
product: 743025
reactant: 742989
notes: Abbreviation: R_HISTD Synonyms: _0 EC Number: 1.1.1.23 SUBSYSTEM: Histidine Metabolism Equation: [c] : h2o + histd + (2) nad --> (3) h + his-L + (2) nadh Confidence Level: 2 genes: LOCUS:BPLAN_206#ABBREVIATION:hisD#ECNUMBERS:1.1.1.23# proteins: NAME:Histidinol dehydrogenase#ABBREVIATION:HisD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_206)
reactant: 743001

743050
type: SpeciesReference
stoichiometry: 2.0
species: 539966

743013
type: SpeciesReference
stoichiometry: 2.0
species: 539964

542644
type: LocalParameter
value: 0.0

542642
type: LocalParameter
value: 0.0

542641
type: LocalParameter
value: 999999.0

542639
type: LocalParameter
value: 0.0

743037
type: SpeciesReference
stoichiometry: 1.0
species: 539790

539790
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Histidine_C6H9N3O2

743025
type: SpeciesReference
stoichiometry: 3.0
species: 539783

742989
type: SpeciesReference
stoichiometry: 1.0
species: 539779

743001
type: SpeciesReference
stoichiometry: 1.0
species: 539793

539793
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Histidinol_C6H12N3O

539990
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Ornithine_C5H13N2O2

541180
type: Reaction
product: 751498
product: 751462
reactant: 751450
notes: Abbreviation: R_PRASCS Synonyms: _0 EC Number: 6.3.2.6 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : 5aizc + asp-L + atp --> 25aics + adp + h + pi Confidence Level: 2 genes: LOCUS:BPLAN_155#ABBREVIATION:purC#ECNUMBERS:6.3.2.6# proteins: NAME:phosphoribosyaminoimidazole-succinocarboxamide synthetase#ABBREVIATION:PurC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_155)
reactant: 751438
reversible: false
reactant: 751426
product: 751486
kinetic law: 751510
name: phosphoribosylaminoimidazolesuccinocarboxamide synthase
fast: false
product: 751474

751498
type: SpeciesReference
stoichiometry: 1.0
species: 540013

751462
type: SpeciesReference
stoichiometry: 1.0
species: 539490

751450
type: SpeciesReference
stoichiometry: 1.0
species: 539659

751438
type: SpeciesReference
stoichiometry: 1.0
species: 539653

751426
type: SpeciesReference
stoichiometry: 1.0
species: 539562

539562
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate_C9H11N3O9P

751486
type: SpeciesReference
stoichiometry: 1.0
species: 539783

543472
type: LocalParameter
value: 0.0

543470
type: LocalParameter
value: 0.0

543468
type: LocalParameter
value: 999999.0

543466
type: LocalParameter
value: 0.0

751474
type: SpeciesReference
stoichiometry: 1.0
species: 539611

540754
type: Reaction
kinetic law: 741944
product: 741932
reactant: 741919
notes: Abbreviation: R_GLUR Synonyms: _0 EC Number: 5.1.1.3 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : glu-D <==> glu-L Confidence Level: 2 genes: LOCUS:BPLAN_231#ABBREVIATION:murI#ECNUMBERS:5.1.1.3# proteins: NAME:glutamate racemase#ABBREVIATION:MurI# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_231)
fast: false
reversible: true
name: glutamate racemase

542542
type: LocalParameter
value: 0.0

542540
type: LocalParameter
value: 0.0

542539
type: LocalParameter
value: 999999.0

542537
type: LocalParameter
value: -999999.0

741932
type: SpeciesReference
stoichiometry: 1.0
species: 539760

741919
type: SpeciesReference
stoichiometry: 1.0
species: 539759

539759
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Glutamate_C5H8NO4

539696
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Deoxycytidine_C9H13N3O4

541249
type: Reaction
product: 753011
reversible: false
name: riboflavin kinase
product: 753023
notes: Abbreviation: R_RBFK Synonyms: _0 EC Number: 2.7.1.26 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + ribflv --> adp + fmn + h Confidence Level: 2 genes: LOCUS:BPLAN_562#ABBREVIATION:ribF#ECNUMBERS:2.7.1.26,-!-,2.7.7.2# proteins: NAME:Flavokinase and FAD synthetase#ABBREVIATION:RibF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_562)
reactant: 752987
product: 752999
fast: false
kinetic law: 753035
reactant: 752975

753011
type: SpeciesReference
stoichiometry: 1.0
species: 539738

753023
type: SpeciesReference
stoichiometry: 1.0
species: 539783

752987
type: SpeciesReference
stoichiometry: 1.0
species: 540044

540044
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Riboflavin_C17H20N4O6

752999
type: SpeciesReference
stoichiometry: 1.0
species: 539611

543633
type: LocalParameter
value: 0.0

543631
type: LocalParameter
value: 0.0

543629
type: LocalParameter
value: 999999.0

543627
type: LocalParameter
value: 0.0

752975
type: SpeciesReference
stoichiometry: 1.0
species: 539659

539645
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Arginine_C6H15N4O2

541219
type: Reaction
product: 752370
name: purine-nucleoside phosphorylase (Deoxyadenosine)
reactant: 752334
fast: false
notes: Abbreviation: R_PUNP2 Synonyms: _0 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dad-2 + pi <==> 2dr1p + ade Confidence Level: 2 Specificity not completely determined. Can also catalyse ribosyltransferase reactions of the type catalysed by EC 2.4.2.5, nucleoside ribosyltransferase genes: LOCUS:BPLAN_265#ABBREVIATION:xapA#ECNUMBERS:2.4.2.1# proteins: NAME:purine nucleoside phosphorylase#ABBREVIATION:XapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_265)
product: 752358
kinetic law: 752382
reversible: true
reactant: 752346

752370
type: SpeciesReference
stoichiometry: 1.0
species: 539607

752334
type: SpeciesReference
stoichiometry: 1.0
species: 539686

752358
type: SpeciesReference
stoichiometry: 1.0
species: 539508

539508
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Deoxy-D-ribose 1-phosphate_C5H9O7P

543563
type: LocalParameter
value: 0.0

543561
type: LocalParameter
value: 0.0

543559
type: LocalParameter
value: 999999.0

543557
type: LocalParameter
value: -999999.0

752346
type: SpeciesReference
stoichiometry: 1.0
species: 540013

541135
type: Reaction
product: 750471
reactant: 750447
name: phosphomevalonate kinase
product: 750459
kinetic law: 750484
reversible: false
notes: Abbreviation: R_PMEVKx Synonyms: _0 EC Number: 2.7.4.2 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : 5pmev + atp --> 5dpmev + adp Confidence Level: 2 genes: LOCUS:BPLAN_549#ABBREVIATION:mvaK#ECNUMBERS:2.7.4.2# proteins: NAME:phosphomevalonate kinase#ABBREVIATION:mvaK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_549)
reactant: 750435
fast: false

750471
type: SpeciesReference
stoichiometry: 1.0
species: 539611

750447
type: SpeciesReference
stoichiometry: 1.0
species: 539659

750459
type: SpeciesReference
stoichiometry: 1.0
species: 539570

539570
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (R)-5-Diphosphomevalonate_C6H10O10P2

543367
type: LocalParameter
value: 0.0

543365
type: LocalParameter
value: 0.0

543363
type: LocalParameter
value: 999999.0

543361
type: LocalParameter
value: 0.0

750435
type: SpeciesReference
stoichiometry: 1.0
species: 539578

539578
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _Mevalonate-5-phosphate_C6H10O7P

540210
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Urea_CH4N2O

540550
type: Reaction
kinetic law: 738799
product: 738787
reactant: 738775
notes: Abbreviation: R_EX_akg_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : akg <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: _2-Oxoglutarate exchange

542134
type: LocalParameter
value: 0.0

542133
type: LocalParameter
value: 0.0

542131
type: LocalParameter
value: 0.0

542130
type: LocalParameter
value: 0.0

738787
type: SpeciesReference
stoichiometry: 1.0
species: 540131

540131
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: _2-Oxoglutarate_C5H4O5

738775
type: SpeciesReference
stoichiometry: 1.0
species: 539624

539624
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: _2-Oxoglutarate_C5H4O5

539528
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Dehydroquinate_C7H9O6

539679
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Cytosine_C4H5N3O

541234
type: Reaction
name: purine-nucleoside phosphorylase (Xanthosine)
reactant: 752647
notes: Abbreviation: R_PUNP7 Synonyms: _0 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : pi + xtsn <==> r1p + xan Confidence Level: 2 Specificity not completely determined. Can also catalyse ribosyltransferase reactions of the type catalysed by EC 2.4.2.5, nucleoside ribosyltransferasextsn genes: LOCUS:BPLAN_265#ABBREVIATION:xapA#ECNUMBERS:2.4.2.1# proteins: NAME:purine nucleoside phosphorylase#ABBREVIATION:XapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_265)
kinetic law: 752683
reversible: true
product: 752671
product: 752659
reactant: 752635
fast: false

752647
type: SpeciesReference
stoichiometry: 1.0
species: 540126

540126
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Xanthosine_C10H12N4O6

543598
type: LocalParameter
value: 0.0

543596
type: LocalParameter
value: 0.0

543594
type: LocalParameter
value: 999999.0

543592
type: LocalParameter
value: -999999.0

752671
type: SpeciesReference
stoichiometry: 1.0
species: 540124

540124
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Xanthine_C5H4N4O2

752659
type: SpeciesReference
stoichiometry: 1.0
species: 540040

752635
type: SpeciesReference
stoichiometry: 1.0
species: 540013

540148
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Glycerol_C3H8O3

540093
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Reduced thioredoxin_XH2

539717
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Dephospho-CoA_C21H33N7O13P2S

540105
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476

540610
type: Reaction
kinetic law: 739523
product: 739510
reactant: 739498
notes: Abbreviation: R_EX_h_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : h <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: H+ exchange

542254
type: LocalParameter
value: 0.0

542253
type: LocalParameter
value: 0.0

542251
type: LocalParameter
value: 999999.0

542250
type: LocalParameter
value: -999999.0

739510
type: SpeciesReference
stoichiometry: 1.0
species: 540153

540153
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: H+_H

739498
type: SpeciesReference
stoichiometry: 1.0
species: 539784

540050
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Sedoheptulose 7-phosphate_C7H13O10P

540217
type: Reaction
reversible: false
product: 730618
kinetic law: 730630
notes: Abbreviation: R_ACCOACr Synonyms: _0 EC Number: 6.4.1.2 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : accoa + atp + hco3 --> adp + h + malcoa + pi Confidence Level: 2 NCD genes: LOCUS:BPLAN_479#ABBREVIATION:accA#ECNUMBERS:6.4.1.2# LOCUS:BPLAN_162#ABBREVIATION:accD#ECNUMBERS:6.4.1.2# LOCUS:BPLAN_124#ABBREVIATION:accB# LOCUS:BPLAN_123#ABBREVIATION:accC#ECNUMBERS:6.3.4.14# proteins: NAME:AcetylCoA carboxylase#ABBREVIATION:Acc# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_479 and BPLAN_124 and BPLAN_123 and BPLAN_162)
product: 730606
reactant: 730569
name: acetyl-CoA carboxylase, reversible reaction
fast: false
reactant: 730557
product: 730581
reactant: 730545
product: 730594

730618
type: SpeciesReference
stoichiometry: 1.0
species: 540013

541471
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value: 0.0

541468
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value: 0.0

541465
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value: 999999.0

541462
type: LocalParameter
value: 0.0

730606
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stoichiometry: 1.0
species: 539944

539944
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Malonyl-CoA_C24H33N7O19P3S

730569
type: SpeciesReference
stoichiometry: 1.0
species: 539785

539785
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Bicarbonate_CHO3

730557
type: SpeciesReference
stoichiometry: 1.0
species: 539659

730581
type: SpeciesReference
stoichiometry: 1.0
species: 539611

730545
type: SpeciesReference
stoichiometry: 1.0
species: 539590

539590
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Acetyl-CoA_C23H34N7O17P3S

730594
type: SpeciesReference
stoichiometry: 1.0
species: 539783

539972
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Ammonium_H4N

541399
type: Reaction
reactant: 756236
name: UDP-N-acetylglucosamine diphosphorylase
reversible: false
product: 756285
fast: false
product: 756272
kinetic law: 756297
reactant: 756248
reactant: 756260
notes: Abbreviation: R_UAGDP Synonyms: _0 EC Number: 2.7.7.23 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : acgam1p + h + utp --> ppi + uacgam Confidence Level: 2 genes: LOCUS:BPLAN_036#ABBREVIATION:galU#ECNUMBERS:2.7.7.23# proteins: NAME:UTP-glucose-1-phosphate uridylyltransferase#ABBREVIATION:galU# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_036)

756236
type: SpeciesReference
stoichiometry: 1.0
species: 539595

539595
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N-Acetyl-D-glucosamine 1-phosphate_C8H14NO9P

756285
type: SpeciesReference
stoichiometry: 1.0
species: 540103

540103
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476

756272
type: SpeciesReference
stoichiometry: 1.0
species: 540021

543983
type: LocalParameter
value: 0.0

543981
type: LocalParameter
value: 0.0

543979
type: LocalParameter
value: 999999.0

543977
type: LocalParameter
value: 0.0

756248
type: SpeciesReference
stoichiometry: 1.0
species: 539783

756260
type: SpeciesReference
stoichiometry: 1.0
species: 540121

540029
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Proline_C5H9NO2

540640
type: Reaction
kinetic law: 739886
product: 739873
reactant: 739861
notes: Abbreviation: R_EX_nh4_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : nh4 <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Ammonia exchange

542314
type: LocalParameter
value: 0.0

542313
type: LocalParameter
value: 0.0

542311
type: LocalParameter
value: 999999.0

542310
type: LocalParameter
value: 0.0

739873
type: SpeciesReference
stoichiometry: 1.0
species: 540168

540168
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Ammonium_H4N

739861
type: SpeciesReference
stoichiometry: 1.0
species: 539972

540739
type: Reaction
product: 741542
fast: false
reactant: 741530
reactant: 741518
product: 741555
name: glutamine-fructose-6-phosphate transaminase
kinetic law: 741567
notes: Abbreviation: R_GF6PTA Synonyms: _0 EC Number: 2.6.1.16 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : f6p + gln-L --> gam6p + glu-L Confidence Level: 2 genes: LOCUS:BPLAN_351#ABBREVIATION:glmS#ECNUMBERS:2.6.1.16# proteins: NAME:Glucosamine fructose-6-phosphate aminotransferase (isomerizing)#ABBREVIATION:GlmS# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_351)
reversible: false

741542
type: SpeciesReference
stoichiometry: 1.0
species: 539751

539751
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Glucosamine 6-phosphate_C6H13NO8P

741530
type: SpeciesReference
stoichiometry: 1.0
species: 539756

741518
type: SpeciesReference
stoichiometry: 1.0
species: 539730

539730
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Fructose 6-phosphate_C6H11O9P

741555
type: SpeciesReference
stoichiometry: 1.0
species: 539760

542512
type: LocalParameter
value: 0.0

542511
type: LocalParameter
value: 0.0

542509
type: LocalParameter
value: 999999.0

542508
type: LocalParameter
value: 0.0

539733
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Fructose 1,6-bisphosphate_C6H10O12P2

540625
type: Reaction
kinetic law: 739704
product: 739692
reactant: 739680
notes: Abbreviation: R_EX_lys_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : lys-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Lysine exchange

542284
type: LocalParameter
value: 0.0

542283
type: LocalParameter
value: 0.0

542281
type: LocalParameter
value: 999999.0

542280
type: LocalParameter
value: 0.0

739692
type: SpeciesReference
stoichiometry: 1.0
species: 540159

540159
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Lysine_C6H15N2O2

739680
type: SpeciesReference
stoichiometry: 1.0
species: 539937

539937
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Lysine_C6H15N2O2

539641
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: apoprotein [acyl carrier protein]_RHO

540165
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Nicotinate_C6H4NO2

540931
type: Reaction
fast: false
kinetic law: 745999
reactant: 745961
notes: Abbreviation: R_NACODA Synonyms: _0 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : acg5sa + h2o --> ac + glu5sa Confidence Level: 0 JLR genes: LOCUS:BPLAN_320#ABBREVIATION:argE#ECNUMBERS:3.5.1.16# proteins: NAME:acetylornithine deacetylase#ABBREVIATION:ArgE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_320)
product: 745987
reactant: 745949
product: 745974
reversible: false
name: N-acetylornithine deacetylase

542900
type: LocalParameter
value: 0.0

542898
type: LocalParameter
value: 0.0

542897
type: LocalParameter
value: 999999.0

542895
type: LocalParameter
value: 0.0

745961
type: SpeciesReference
stoichiometry: 1.0
species: 539779

745987
type: SpeciesReference
stoichiometry: 1.0
species: 539758

539758
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Glutamate 5-semialdehyde_C5H9NO3

745949
type: SpeciesReference
stoichiometry: 1.0
species: 539593

539593
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N-Acetyl-L-glutamate 5-semialdehyde_C7H10NO4

745974
type: SpeciesReference
stoichiometry: 1.0
species: 539584

539584
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Acetate_C2H3O2

540814
type: Reaction
reactant: 743195
fast: false
product: 743219
notes: Abbreviation: R_HPPK2 Synonyms: _1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 6hmhpt + atp --> 6hmhptpp + amp + h Confidence Level: 2 JLR- Neidhardt pg 667 genes: LOCUS:BPLAN_016#ABBREVIATION:folK#ECNUMBERS:2.7.6.3# proteins: NAME:_7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase#ABBREVIATION:FolK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_016)
reactant: 743207
product: 743231
reversible: false
product: 743243
name: _6-hydroxymethyl-dihydropterin pyrophosphokinase
kinetic law: 743256

743195
type: SpeciesReference
stoichiometry: 1.0
species: 539580

539580
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _6-hydroxymethyl dihydropterin_C7H9N5O2

743219
type: SpeciesReference
stoichiometry: 1.0
species: 539582

539582
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _6-hydroxymethyl-dihydropterin pyrophosphate_C7H8N5O8P2

743207
type: SpeciesReference
stoichiometry: 1.0
species: 539659

743231
type: SpeciesReference
stoichiometry: 1.0
species: 539638

743243
type: SpeciesReference
stoichiometry: 1.0
species: 539783

542662
type: LocalParameter
value: 0.0

542660
type: LocalParameter
value: 0.0

542659
type: LocalParameter
value: 999999.0

542657
type: LocalParameter
value: 0.0

541411
type: Reaction
notes: Abbreviation: R_UAPGR Synonyms: _0 EC Number: 1.1.1.158 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : h + nadph + uaccg --> nadp + uamr Confidence Level: 2 genes: LOCUS:BPLAN_266#ABBREVIATION:murB#ECNUMBERS:1.1.1.158# proteins: NAME:UDP-N-acetylenolpyruvoylglycosamine reductase#ABBREVIATION:MurB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_266)
reversible: false
product: 756609
fast: false
kinetic law: 756633
product: 756621
name: UDP-N-acetylenolpyruvoylglucosamine reductase
reactant: 756585
reactant: 756573
reactant: 756597

756609
type: SpeciesReference
stoichiometry: 1.0
species: 539967

544011
type: LocalParameter
value: 0.0

544009
type: LocalParameter
value: 0.0

544007
type: LocalParameter
value: 999999.0

544005
type: LocalParameter
value: 0.0

756621
type: SpeciesReference
stoichiometry: 1.0
species: 540107

756585
type: SpeciesReference
stoichiometry: 1.0
species: 539969

756573
type: SpeciesReference
stoichiometry: 1.0
species: 539783

756597
type: SpeciesReference
stoichiometry: 1.0
species: 540102

540102
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476

541024
type: Reaction
product: 748005
notes: Abbreviation: R_NTD6 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : damp + h2o --> dad-2 + pi Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 747993
reversible: false
kinetic law: 748017
reactant: 747969
name: _5'-nucleotidase (dAMP)
reactant: 747981
fast: false

748005
type: SpeciesReference
stoichiometry: 1.0
species: 540013

747993
type: SpeciesReference
stoichiometry: 1.0
species: 539686

543108
type: LocalParameter
value: 0.0

543106
type: LocalParameter
value: 0.0

543104
type: LocalParameter
value: 999999.0

543102
type: LocalParameter
value: 0.0

747969
type: SpeciesReference
stoichiometry: 1.0
species: 539688

747981
type: SpeciesReference
stoichiometry: 1.0
species: 539779

540442
type: Reaction
notes: Abbreviation: R_DADK Synonyms: _0 EC Number: 2.7.4.11 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + damp <==> adp + dadp Confidence Level: 2 AMP can also act as acceptor genes: LOCUS:BPLAN_420#ABBREVIATION:adk#ECNUMBERS:2.7.4.3# proteins: NAME:Adenylate kinase#ABBREVIATION:Adk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_420)
fast: false
reactant: 736470
reversible: true
product: 736494
kinetic law: 736518
product: 736506
name: deoxyadenylate kinase
reactant: 736482

736470
type: SpeciesReference
stoichiometry: 1.0
species: 539659

736494
type: SpeciesReference
stoichiometry: 1.0
species: 539611

541926
type: LocalParameter
value: 0.0

541925
type: LocalParameter
value: 0.0

541923
type: LocalParameter
value: 999999.0

541922
type: LocalParameter
value: -999999.0

736506
type: SpeciesReference
stoichiometry: 1.0
species: 539687

539687
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dADP_C10H12N5O9P2

736482
type: SpeciesReference
stoichiometry: 1.0
species: 539688

541273
type: Reaction
kinetic law: 753516
product: 753504
reactant: 753492
notes: Abbreviation: R_RPI Synonyms: _0 EC Number: 5.3.1.6 SUBSYSTEM: Pentose Phosphate Pathway Equation: [c] : r5p <==> ru5p-D Confidence Level: 2 SMP genes: LOCUS:BPLAN_345#ABBREVIATION:rpiB#ECNUMBERS:5.3.1.6,-!-,5.3.1.-# proteins: NAME:ribose-5-phosphate isomerase B#ABBREVIATION:RpiB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_345)
fast: false
reversible: true
name: ribose-5-phosphate isomerase

543689
type: LocalParameter
value: 0.0

543687
type: LocalParameter
value: 0.0

543685
type: LocalParameter
value: 999999.0

543683
type: LocalParameter
value: -999999.0

753504
type: SpeciesReference
stoichiometry: 1.0
species: 540047

540047
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Ribulose 5-phosphate_C5H9O8P

753492
type: SpeciesReference
stoichiometry: 1.0
species: 540041

540484
type: Reaction
product: 737412
reactant: 737363
kinetic law: 737424
reactant: 737376
product: 737388
reactant: 737351
reversible: false
name: dihydrofolate synthase
fast: false
notes: Abbreviation: R_DHFS Synonyms: _0 EC Number: 6.3.2.12 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + dhpt + glu-L --> adp + dhf + pi Confidence Level: 2 genes: LOCUS:BPLAN_453#ABBREVIATION:folC#ECNUMBERS:6.3.2.12,-!-,6.3.2.17# proteins: NAME:folypolyglutamate synthase and dihydrofolate synthase#ABBREVIATION:FolC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_453)
product: 737400

737412
type: SpeciesReference
stoichiometry: 1.0
species: 540013

737363
type: SpeciesReference
stoichiometry: 1.0
species: 539711

539711
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Dihydropteroate_C14H13N6O3

542003
type: LocalParameter
value: 0.0

542002
type: LocalParameter
value: 0.0

542000
type: LocalParameter
value: 999999.0

541999
type: LocalParameter
value: 0.0

737376
type: SpeciesReference
stoichiometry: 1.0
species: 539760

737388
type: SpeciesReference
stoichiometry: 1.0
species: 539611

737351
type: SpeciesReference
stoichiometry: 1.0
species: 539659

737400
type: SpeciesReference
stoichiometry: 1.0
species: 539704

541105
type: Reaction
product: 749853
reversible: false
reactant: 749805
notes: Abbreviation: R_PDX5PS Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : dxyl5p + nad + phthr --> co2 + h + (2) h2o + nadh + pdx5p + pi Confidence Level: 2 JLR- two reactions combined (intermediate of the first is unknown) genes: LOCUS:BPLAN_559#ABBREVIATION:pdxA#ECNUMBERS:1.1.1.262# LOCUS:BPLAN_617#ABBREVIATION:pdxJ# proteins: NAME:Pyridoxine 5-phosphate biosynthetic protein#ABBREVIATION:PdxAJ# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_617 and BPLAN_559)
product: 749889
kinetic law: 749901
product: 749865
name: Pyridoxine 5'-phosphate synthase
product: 749841
fast: false
reactant: 749817
product: 749829
reactant: 749793
product: 749877

749853
type: SpeciesReference
stoichiometry: 2.0
species: 539779

749805
type: SpeciesReference
stoichiometry: 1.0
species: 539964

749889
type: SpeciesReference
stoichiometry: 1.0
species: 540013

543297
type: LocalParameter
value: 0.0

543295
type: LocalParameter
value: 0.0

543293
type: LocalParameter
value: 999999.0

543291
type: LocalParameter
value: 0.0

749865
type: SpeciesReference
stoichiometry: 1.0
species: 539966

749841
type: SpeciesReference
stoichiometry: 1.0
species: 539783

749817
type: SpeciesReference
stoichiometry: 1.0
species: 540012

540012
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: O-Phospho-4-hydroxy-L-threonine_C4H8NO7P

749829
type: SpeciesReference
stoichiometry: 1.0
species: 539673

749793
type: SpeciesReference
stoichiometry: 1.0
species: 539726

539726
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _1-deoxy-D-xylulose 5-phosphate_C5H9O7P

749877
type: SpeciesReference
stoichiometry: 1.0
species: 540003

540003
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Pyridoxine 5'-phosphate_C8H10NO6P

541426
type: Reaction
notes: Abbreviation: R_UMPK Synonyms: _9 EC Number: 2.7.4.14 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + ump <==> adp + udp Confidence Level: 2 genes: LOCUS:BPLAN_515#ABBREVIATION:pyrH#ECNUMBERS:2.7.4.-# LOCUS:BPLAN_575#ABBREVIATION:cmk#ECNUMBERS:2.7.4.14# proteins: NAME:cytidine monophosphate kinase#ABBREVIATION:Cmk# NAME:uridylate kinase#ABBREVIATION:PyrH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_515) or (BPLAN_575)
product: 756960
product: 756972
reactant: 756948
name: UMP kinase
reversible: true
reactant: 756936
fast: false
kinetic law: 756985

756960
type: SpeciesReference
stoichiometry: 1.0
species: 539611

756972
type: SpeciesReference
stoichiometry: 1.0
species: 540111

756948
type: SpeciesReference
stoichiometry: 1.0
species: 540114

756936
type: SpeciesReference
stoichiometry: 1.0
species: 539659

544046
type: LocalParameter
value: 0.0

544044
type: LocalParameter
value: 0.0

544042
type: LocalParameter
value: 999999.0

544040
type: LocalParameter
value: -999999.0

541309
type: Reaction
kinetic law: 754317
product: 754292
product: 754304
notes: Abbreviation: R_SUCBZL Synonyms: _0 EC Number: 6.2.1.26 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + coa + sucbz --> amp + ppi + sbzcoa Confidence Level: 2 genes: LOCUS:BPLAN_365#ABBREVIATION:menE#ECNUMBERS:6.2.1.26# proteins: NAME:O-succinylbenzoate-CoA ligase#ABBREVIATION:MenE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_365)
reactant: 754268
reversible: false
reactant: 754256
reactant: 754243
fast: false
product: 754280
name: o-succinylbenzoate-CoA ligase

543773
type: LocalParameter
value: 0.0

543771
type: LocalParameter
value: 0.0

543769
type: LocalParameter
value: 999999.0

543767
type: LocalParameter
value: 0.0

754292
type: SpeciesReference
stoichiometry: 1.0
species: 540021

754304
type: SpeciesReference
stoichiometry: 1.0
species: 540053

754268
type: SpeciesReference
stoichiometry: 1.0
species: 540075

540075
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: o-Succinylbenzoate_C11H8O5

754256
type: SpeciesReference
stoichiometry: 1.0
species: 539677

754243
type: SpeciesReference
stoichiometry: 1.0
species: 539659

754280
type: SpeciesReference
stoichiometry: 1.0
species: 539638

541039
type: Reaction
reversible: false
product: 748331
product: 748307
fast: false
reactant: 748282
kinetic law: 748343
notes: Abbreviation: R_NTPP2 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : gtp + h2o --> gmp + h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_237#ABBREVIATION:mazG# proteins: NAME:Nucleotide triphosphate pyrophosphohydrolase#ABBREVIATION:MazG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_237)
name: Nucleoside triphosphate pyrophosphorylase (gtp)
reactant: 748294
product: 748319

748331
type: SpeciesReference
stoichiometry: 1.0
species: 540021

748307
type: SpeciesReference
stoichiometry: 1.0
species: 539772

748282
type: SpeciesReference
stoichiometry: 1.0
species: 539776

543143
type: LocalParameter
value: 0.0

543141
type: LocalParameter
value: 0.0

543139
type: LocalParameter
value: 999999.0

543137
type: LocalParameter
value: 0.0

748294
type: SpeciesReference
stoichiometry: 1.0
species: 539779

748319
type: SpeciesReference
stoichiometry: 1.0
species: 539783

540101
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476

540352
type: Reaction
reversible: false
reactant: 733577
product: 733602
kinetic law: 733627
reactant: 733590
fast: false
name: aspartate kinase
product: 733615
notes: Abbreviation: R_ASPK Synonyms: _0 EC Number: 2.7.2.4 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : asp-L + atp --> 4pasp + adp Confidence Level: 2 genes: LOCUS:BPLAN_138#ABBREVIATION:thrA#ECNUMBERS:2.7.2.4,-!-,1.1.1.3# proteins: NAME:Homoserine dehydrogenase#ABBREVIATION:MetL# NAME:Aspartate kinase I#ABBREVIATION:ThrA# NAME:Aspartokinase III#ABBREVIATION:LysC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_138)

733577
type: SpeciesReference
stoichiometry: 1.0
species: 539653

733602
type: SpeciesReference
stoichiometry: 1.0
species: 539552

539552
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _4-Phospho-L-aspartate_C4H6NO7P

541748
type: LocalParameter
value: 0.0

541747
type: LocalParameter
value: 0.0

541745
type: LocalParameter
value: 999999.0

541744
type: LocalParameter
value: 0.0

733590
type: SpeciesReference
stoichiometry: 1.0
species: 539659

733615
type: SpeciesReference
stoichiometry: 1.0
species: 539611

540724
type: Reaction
name: glycerol-3-phosphate dehydrogenase (ubiquinone-8)
product: 741190
notes: Abbreviation: R_G3PD5 Synonyms: _0 EC Number: 1.1.5.3 SUBSYSTEM: Oxidative Phosphorylation Equation: [c] : glyc3p + mqn8 <==> dhap + mql8 Confidence Level: 2 JLR genes: LOCUS:BPLAN_182#ABBREVIATION:glpD#ECNUMBERS:1.1.5.3# proteins: NAME:glycerol-3-phosphate dehydrogenase#ABBREVIATION:GlpD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_182)
kinetic law: 741202
reversible: true
reactant: 741166
fast: false
product: 741178
reactant: 741154

741190
type: SpeciesReference
stoichiometry: 1.0
species: 539953

542482
type: LocalParameter
value: 0.0

542481
type: LocalParameter
value: 0.0

542479
type: LocalParameter
value: 999999.0

542478
type: LocalParameter
value: -999999.0

741166
type: SpeciesReference
stoichiometry: 1.0
species: 539955

741178
type: SpeciesReference
stoichiometry: 1.0
species: 539702

741154
type: SpeciesReference
stoichiometry: 1.0
species: 539767

539767
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Glycerol 3-phosphate_C3H7O6P

540499
type: Reaction
reversible: false
fast: false
notes: Abbreviation: R_DHPPDA2 Synonyms: _0 EC Number: 3.5.4.26 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 25drapp + h + h2o --> 5apru + nh4 Confidence Level: 2 Riboflavin-specific deaminaseAR genes: LOCUS:BPLAN_491#ABBREVIATION:ribD#ECNUMBERS:3.5.4.26,-!-,1.1.1.193# proteins: NAME:pyrimidine deaminase and pyrimidine reductase#ABBREVIATION:RibD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_491)
kinetic law: 737727
product: 737703
reactant: 737667
reactant: 737691
reactant: 737679
name: diaminohydroxyphosphoribosylaminopryrimidine deaminase (25drapp)
product: 737715

542032
type: LocalParameter
value: 0.0

542031
type: LocalParameter
value: 0.0

542029
type: LocalParameter
value: 999999.0

542028
type: LocalParameter
value: 0.0

737703
type: SpeciesReference
stoichiometry: 1.0
species: 539566

539566
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-Amino-6-(5'-phosphoribosylamino)uracil_C9H13N4O9P

737667
type: SpeciesReference
stoichiometry: 1.0
species: 539492

539492
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2,5-Diamino-6-(ribosylamino)-4-(3H)-pyrimidinone 5'-phosphate_C9H14N5O8P

737691
type: SpeciesReference
stoichiometry: 1.0
species: 539779

737679
type: SpeciesReference
stoichiometry: 1.0
species: 539783

737715
type: SpeciesReference
stoichiometry: 1.0
species: 539970

540889
type: Reaction
product: 744958
reversible: false
reactant: 744946
name: L-leucine transport via ABC system
product: 744995
kinetic law: 745007
product: 744970
notes: Abbreviation: R_LEUabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + h2o[c] + leu-L[e] --> adp[c] + h[c] + leu-L[c] + pi[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 744983
reactant: 744934
reactant: 744922
fast: false

744958
type: SpeciesReference
stoichiometry: 1.0
species: 539611

744946
type: SpeciesReference
stoichiometry: 1.0
species: 539934

539934
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Leucine_C6H13NO2

744995
type: SpeciesReference
stoichiometry: 1.0
species: 540013

542816
type: LocalParameter
value: 0.0

542814
type: LocalParameter
value: 0.0

542813
type: LocalParameter
value: 999999.0

542811
type: LocalParameter
value: 0.0

744970
type: SpeciesReference
stoichiometry: 1.0
species: 539783

744983
type: SpeciesReference
stoichiometry: 1.0
species: 539932

744934
type: SpeciesReference
stoichiometry: 1.0
species: 539779

744922
type: SpeciesReference
stoichiometry: 1.0
species: 539659

540286
type: Reaction
product: 732105
fast: false
name: adenosylhomocysteinase
reversible: true
notes: Abbreviation: R_AHC Synonyms: _0 EC Number: 3.3.1.1 SUBSYSTEM: Methionine Metabolism Equation: [c] : ahcys + h2o <==> adn + hcys-L Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 732117
reactant: 732079
product: 732092
reactant: 732067

732105
type: SpeciesReference
stoichiometry: 1.0
species: 539787

541616
type: LocalParameter
value: 0.0

541615
type: LocalParameter
value: 0.0

541613
type: LocalParameter
value: 999999.0

541612
type: LocalParameter
value: -999999.0

732079
type: SpeciesReference
stoichiometry: 1.0
species: 539779

732092
type: SpeciesReference
stoichiometry: 1.0
species: 539609

539609
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Adenosine_C10H13N5O4

732067
type: SpeciesReference
stoichiometry: 1.0
species: 539615

541084
type: Reaction
reversible: false
kinetic law: 749334
name: orotidine-5'-phosphate decarboxylase
notes: Abbreviation: R_OMPDC Synonyms: _0 EC Number: 4.1.1.23 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : h + orot5p --> co2 + ump Confidence Level: 2 genes: LOCUS:BPLAN_128#ABBREVIATION:pyrFE#ECNUMBERS:4.1.1.23# proteins: NAME:Orotidine 5'-phosphate decarboxylase-Orotate phosphoribosyltransferase#ABBREVIATION:PyrFE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_128)
reactant: 749285
reactant: 749297
fast: false
product: 749310
product: 749322

543248
type: LocalParameter
value: 0.0

543246
type: LocalParameter
value: 0.0

543244
type: LocalParameter
value: 999999.0

543242
type: LocalParameter
value: 0.0

749285
type: SpeciesReference
stoichiometry: 1.0
species: 539783

749297
type: SpeciesReference
stoichiometry: 1.0
species: 539993

539993
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Orotidine 5'-phosphate_C10H10N2O11P

749310
type: SpeciesReference
stoichiometry: 1.0
species: 539673

749322
type: SpeciesReference
stoichiometry: 1.0
species: 540114

541213
type: Reaction
fast: false
product: 752238
reversible: false
notes: Abbreviation: R_PTPATi Synonyms: _0 EC Number: 2.7.7.3 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + h + pan4p --> dpcoa + ppi Confidence Level: 2 JLR- irreversible form of PTPAT genes: LOCUS:BPLAN_354#ABBREVIATION:coaD#ECNUMBERS:2.7.7.3# proteins: NAME:phosphopantetheine adenyltransferase#ABBREVIATION:CoaD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_354)
name: pantetheine-phosphate adenylyltransferase
reactant: 752202
reactant: 752214
kinetic law: 752262
reactant: 752226
product: 752250

752238
type: SpeciesReference
stoichiometry: 1.0
species: 539717

752202
type: SpeciesReference
stoichiometry: 1.0
species: 539659

752214
type: SpeciesReference
stoichiometry: 1.0
species: 539783

543549
type: LocalParameter
value: 0.0

543547
type: LocalParameter
value: 0.0

543545
type: LocalParameter
value: 999999.0

543543
type: LocalParameter
value: 0.0

752226
type: SpeciesReference
stoichiometry: 1.0
species: 540001

752250
type: SpeciesReference
stoichiometry: 1.0
species: 540021

540157
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Leucine_C6H13NO2

540367
type: Reaction
reactant: 734290
reactant: 734001
product: 734435
notes: Abbreviation: R_BiomassPam Equation: [c] : (0.488) ala-L + (0.001) amp + (0.281) arg-L + (0.229) asn-L + (0.229) asp-L + (45.7318) atp + (0.000006) coa + (0.126) ctp + (0.087) cys-L + (0.036) datp + (0.014) dctp + (0.014) dgtp + (0.036) dttp + (0.00001) fad + (0.25) gln-L + (0.25) glu-L + (0.582) gly + (0.203) gtp + (45.5608) h2o + (0.09) his-L + (0.276) ile-L + (0.428) leu-L + (0.326) lys-L + (0.146) met-L + (0.00215) nad + (0.00005) nadh + (0.00013) nadp + (0.0004) nadph + (0.001935) pe_Bge + (0.0276) peptido_Bge + (0.176) phe-L + (0.21) pro-L + (0.000052) ps_Bge + (0.035) ptrc + (0.205) ser-L + (0.00005) thf + (0.000223) thmpp[c] + (0.241) thr-L + (0.054) trp-L + (0.131) tyr-L + (0.136) utp + (0.402) val-L --> (45.5608) adp + (45.56035) h + (45.5628) pi + (0.7302) ppi Confidence Level: genes: none proteins: none citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION:
reactant: 734374
reactant: 734025
reactant: 734061
reactant: 734399
reactant: 733989
reactant: 734110
kinetic law: 734459
reactant: 734206
reactant: 733905
reactant: 734302
reactant: 734278
reactant: 734362
reactant: 733929
fast: false
reactant: 733953
reactant: 734049
reactant: 734085
reactant: 734387
product: 734423
reactant: 733977
reactant: 734134
reactant: 734170
product: 734411
reactant: 734314
reactant: 734122
reactant: 734242
reactant: 734158
reversible: false
reactant: 734194
reactant: 734338
reactant: 733941
reactant: 734013
reactant: 734218
reactant: 733965
reactant: 734037
reactant: 734073
reactant: 734098
reactant: 734230
reactant: 734146
reactant: 734182
reactant: 734326
reactant: 734266
name: R_BiomassPam
product: 734447
reactant: 734254
reactant: 734350
reactant: 733917

734290
type: SpeciesReference
stoichiometry: 5.2E-5
species: 540032

540032
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: phosphatidylserine (Blattabacterium Periplaneta americana)_C1986H3698N50O500P50

734001
type: SpeciesReference
stoichiometry: 0.087
species: 539682

734435
type: SpeciesReference
stoichiometry: 45.5628
species: 540013

734374
type: SpeciesReference
stoichiometry: 0.131
species: 540096

734025
type: SpeciesReference
stoichiometry: 0.014
species: 539695

539695
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dCTP_C9H12N3O13P3

734061
type: SpeciesReference
stoichiometry: 1.0E-5
species: 539731

734399
type: SpeciesReference
stoichiometry: 0.402
species: 540122

733989
type: SpeciesReference
stoichiometry: 0.126
species: 539681

734110
type: SpeciesReference
stoichiometry: 0.203
species: 539776

541778
type: LocalParameter
value: 0.0

541777
type: LocalParameter
value: 1.0

541775
type: LocalParameter
value: 999999.0

541774
type: LocalParameter
value: 0.0

734206
type: SpeciesReference
stoichiometry: 5.0E-5
species: 539966

733905
type: SpeciesReference
stoichiometry: 0.488
species: 539628

734302
type: SpeciesReference
stoichiometry: 0.035
species: 540034

734278
type: SpeciesReference
stoichiometry: 0.21
species: 540028

540028
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Proline_C5H9NO2

734362
type: SpeciesReference
stoichiometry: 0.054
species: 540094

540094
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Tryptophan_C11H12N2O2

733929
type: SpeciesReference
stoichiometry: 0.281
species: 539643

733953
type: SpeciesReference
stoichiometry: 0.229
species: 539653

734049
type: SpeciesReference
stoichiometry: 0.036
species: 539720

539720
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dTTP_C10H13N2O14P3

734085
type: SpeciesReference
stoichiometry: 0.25
species: 539760

734387
type: SpeciesReference
stoichiometry: 0.136
species: 540121

734423
type: SpeciesReference
stoichiometry: 45.56035
species: 539783

733977
type: SpeciesReference
stoichiometry: 6.0E-6
species: 539677

734134
type: SpeciesReference
stoichiometry: 0.09
species: 539790

734170
type: SpeciesReference
stoichiometry: 0.326
species: 539936

539936
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Lysine_C6H15N2O2

734411
type: SpeciesReference
stoichiometry: 45.5608
species: 539611

734314
type: SpeciesReference
stoichiometry: 0.205
species: 540056

540056
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Serine_C3H7NO3

734122
type: SpeciesReference
stoichiometry: 45.5608
species: 539779

734242
type: SpeciesReference
stoichiometry: 0.001935
species: 540004

734158
type: SpeciesReference
stoichiometry: 0.428
species: 539932

734194
type: SpeciesReference
stoichiometry: 0.00215
species: 539964

734338
type: SpeciesReference
stoichiometry: 2.23E-4
species: 540086

733941
type: SpeciesReference
stoichiometry: 0.229
species: 539649

734013
type: SpeciesReference
stoichiometry: 0.036
species: 539689

734218
type: SpeciesReference
stoichiometry: 1.3E-4
species: 539967

733965
type: SpeciesReference
stoichiometry: 45.7318
species: 539659

734037
type: SpeciesReference
stoichiometry: 0.014
species: 539701

539701
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dGTP_C10H12N5O13P3

734073
type: SpeciesReference
stoichiometry: 0.25
species: 539756

734098
type: SpeciesReference
stoichiometry: 0.582
species: 539762

734230
type: SpeciesReference
stoichiometry: 4.0E-4
species: 539969

734146
type: SpeciesReference
stoichiometry: 0.276
species: 539914

539914
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Isoleucine_C6H13NO2

734182
type: SpeciesReference
stoichiometry: 0.146
species: 539945

539945
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Methionine_C5H11NO2S

734326
type: SpeciesReference
stoichiometry: 5.0E-5
species: 540083

734266
type: SpeciesReference
stoichiometry: 0.176
species: 540007

734447
type: SpeciesReference
stoichiometry: 0.7302
species: 540021

734254
type: SpeciesReference
stoichiometry: 0.0276
species: 540006

540006
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Peptidoglycan subunit of Blattabacterium Periplaneta americana_C40H62N8O21

734350
type: SpeciesReference
stoichiometry: 0.241
species: 540087

540087
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Threonine_C4H9NO3

733917
type: SpeciesReference
stoichiometry: 0.001
species: 539638

540559
type: Reaction
kinetic law: 738907
product: 738895
reactant: 738883
notes: Abbreviation: R_EX_asn_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : asn-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Asparagine exchange

542152
type: LocalParameter
value: 0.0

542151
type: LocalParameter
value: 0.0

542149
type: LocalParameter
value: 999999.0

542148
type: LocalParameter
value: -999999.0

738895
type: SpeciesReference
stoichiometry: 1.0
species: 540134

738883
type: SpeciesReference
stoichiometry: 1.0
species: 539651

539651
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Asparagine_C4H8N2O3

540022
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-Phospho-beta-D-ribosylamine_C5H11NO7P

539712
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Deoxyinosine_C10H12N4O4

539620
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-amino-1-(5-phospho-D-ribosyl)imidazole_C8H12N3O7P

540949
type: Reaction
kinetic law: 746420
name: NADH dehydrogenase (demethylmenaquinone-8 & 0 protons)
fast: false
notes: Abbreviation: R_NADH9 Synonyms: _0 EC Number: 1.6.5.3 SUBSYSTEM: Oxidative Phosphorylation Equation: [c] : 2dmmq8 + h + nadh --> 2dmmql8 + nad Confidence Level: 2 JLR genes: LOCUS:BPLAN_442#ABBREVIATION:ndh#ECNUMBERS:1.16.1.-,-!-,1.6.99.3# proteins: NAME:NADH dehydrogenase II#ABBREVIATION:Ndh# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_442)
reactant: 746372
reversible: false
reactant: 746384
product: 746396
product: 746408
reactant: 746360

542937
type: LocalParameter
value: 0.0

542935
type: LocalParameter
value: 0.0

542934
type: LocalParameter
value: 999999.0

542932
type: LocalParameter
value: 0.0

746372
type: SpeciesReference
stoichiometry: 1.0
species: 539783

746384
type: SpeciesReference
stoichiometry: 1.0
species: 539966

746396
type: SpeciesReference
stoichiometry: 1.0
species: 539506

539506
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Demethylmenaquinol 8_C50H72O2

746408
type: SpeciesReference
stoichiometry: 1.0
species: 539964

746360
type: SpeciesReference
stoichiometry: 1.0
species: 539504

540427
type: Reaction
notes: Abbreviation: R_CYTD Synonyms: _0 EC Number: 3.5.4.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : cytd + h + h2o --> nh4 + uri Confidence Level: 2 genes: LOCUS:BPLAN_144#ABBREVIATION:cdd#ECNUMBERS:3.5.4.5# proteins: NAME:cytidine/deoxycytidine deaminase#ABBREVIATION:Cdd# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_144)
fast: false
reactant: 736157
reactant: 736145
product: 736182
reactant: 736133
name: cytidine deaminase
kinetic law: 736194
reversible: false
product: 736169

736157
type: SpeciesReference
stoichiometry: 1.0
species: 539779

736145
type: SpeciesReference
stoichiometry: 1.0
species: 539783

736182
type: SpeciesReference
stoichiometry: 1.0
species: 540119

540119
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Uridine_C9H12N2O6

736133
type: SpeciesReference
stoichiometry: 1.0
species: 539685

541898
type: LocalParameter
value: 0.0

541897
type: LocalParameter
value: 0.0

541895
type: LocalParameter
value: 999999.0

541894
type: LocalParameter
value: 0.0

736169
type: SpeciesReference
stoichiometry: 1.0
species: 539970

540733
type: Reaction
kinetic law: 741421
product: 741409
product: 741397
name: phosphoribosylglycinamide formyltransferase
notes: Abbreviation: R_GARFT Synonyms: _1 EC Number: 2.1.2.2 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : 10fthf + gar --> fgam + h + thf Confidence Level: 2 genes: LOCUS:BPLAN_158#ABBREVIATION:purN#ECNUMBERS:2.1.2.2# proteins: NAME:phosphoribosylglycinamide formytransferase#ABBREVIATION:PurN# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_158)
reversible: false
product: 741385
fast: false
reactant: 741360
reactant: 741373

542500
type: LocalParameter
value: 0.0

542499
type: LocalParameter
value: 0.0

542497
type: LocalParameter
value: 999999.0

542496
type: LocalParameter
value: 0.0

741409
type: SpeciesReference
stoichiometry: 1.0
species: 540083

741397
type: SpeciesReference
stoichiometry: 1.0
species: 539783

741385
type: SpeciesReference
stoichiometry: 1.0
species: 539737

741360
type: SpeciesReference
stoichiometry: 1.0
species: 539478

741373
type: SpeciesReference
stoichiometry: 1.0
species: 539752

539752
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N1-(5-Phospho-D-ribosyl)glycinamide_C7H14N2O8P

540934
type: Reaction
kinetic law: 746035
product: 746023
reactant: 746011
notes: Abbreviation: R_NACUP Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: nac[e] --> nac[c] Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: false
name: Nicotinic acid uptake

542906
type: LocalParameter
value: 0.0

542904
type: LocalParameter
value: 0.0

542903
type: LocalParameter
value: 999999.0

542901
type: LocalParameter
value: 0.0

746023
type: SpeciesReference
stoichiometry: 1.0
species: 539961

746011
type: SpeciesReference
stoichiometry: 1.0
species: 539963

540817
type: Reaction
product: 743304
reversible: false
notes: Abbreviation: R_HSDy Synonyms: _0 EC Number: 1.1.1.3 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : aspsa + h + nadph --> hom-L + nadp Confidence Level: 2 genes: LOCUS:BPLAN_138#ABBREVIATION:thrA#ECNUMBERS:2.7.2.4,-!-,1.1.1.3# proteins: NAME:Homoserine dehydrogenase#ABBREVIATION:MetL# NAME:Aspartate kinase I#ABBREVIATION:ThrA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_138)
product: 743316
reactant: 743280
fast: false
reactant: 743268
kinetic law: 743329
reactant: 743292
name: homoserine dehydrogenase (NADPH)

743304
type: SpeciesReference
stoichiometry: 1.0
species: 539795

743316
type: SpeciesReference
stoichiometry: 1.0
species: 539967

743280
type: SpeciesReference
stoichiometry: 1.0
species: 539783

743268
type: SpeciesReference
stoichiometry: 1.0
species: 539657

542668
type: LocalParameter
value: 0.0

542666
type: LocalParameter
value: 0.0

542665
type: LocalParameter
value: 999999.0

542663
type: LocalParameter
value: 0.0

743292
type: SpeciesReference
stoichiometry: 1.0
species: 539969

540469
type: Reaction
kinetic law: 737075
product: 737063
product: 737051
reactant: 737039
notes: Abbreviation: R_DHAD1 Synonyms: _0 EC Number: 4.2.1.9 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 23dhmb --> 3mob + h2o Confidence Level: 2 genes: LOCUS:BPLAN_083#ABBREVIATION:ilvD#ECNUMBERS:4.2.1.9# proteins: NAME:dihidroxy acid dehydratase#ABBREVIATION:IlvD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_083)
fast: false
reversible: false
name: dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)

541976
type: LocalParameter
value: 0.0

541974
type: LocalParameter
value: 0.0

541973
type: LocalParameter
value: 999999.0

541971
type: LocalParameter
value: 0.0

737063
type: SpeciesReference
stoichiometry: 1.0
species: 539779

737051
type: SpeciesReference
stoichiometry: 1.0
species: 539536

737039
type: SpeciesReference
stoichiometry: 1.0
species: 539486

539486
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (R)-2,3-Dihydroxy-3-methylbutanoate_C5H9O4

540039
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Pyruvate_C3H3O3

540391
type: Reaction
kinetic law: 735295
product: 735283
product: 735271
reactant: 735259
notes: Abbreviation: R_CAT Synonyms: _4 EC Number: 1.11.1.6 SUBSYSTEM: Unassigned Equation: [c] : (2) h2o2 --> (2) h2o + o2 Confidence Level: 2 JLR genes: LOCUS:BPLAN_291#ABBREVIATION:ahpC#ECNUMBERS:1.11.1.6# proteins: NAME:peroxiredoxin#ABBREVIATION:ahpC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_291)
fast: false
reversible: false
name: catalase

541826
type: LocalParameter
value: 0.0

541825
type: LocalParameter
value: 0.0

541823
type: LocalParameter
value: 999999.0

541822
type: LocalParameter
value: 0.0

735283
type: SpeciesReference
stoichiometry: 1.0
species: 539977

735271
type: SpeciesReference
stoichiometry: 2.0
species: 539779

735259
type: SpeciesReference
stoichiometry: 2.0
species: 539778

540544
type: Reaction
kinetic law: 738727
product: 738715
product: 738703
reactant: 738690
notes: Abbreviation: R_ENO Synonyms: _0 EC Number: 4.2.1.11 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : 2pg <==> h2o + pep Confidence Level: 2 SMP genes: LOCUS:BPLAN_372#ABBREVIATION:eno#ECNUMBERS:4.2.1.11# proteins: NAME:enolase#ABBREVIATION:Eno# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_372)
fast: false
reversible: true
name: enolase

542122
type: LocalParameter
value: 0.0

542121
type: LocalParameter
value: 0.0

542119
type: LocalParameter
value: 999999.0

542118
type: LocalParameter
value: -999999.0

738715
type: SpeciesReference
stoichiometry: 1.0
species: 540005

738703
type: SpeciesReference
stoichiometry: 1.0
species: 539779

738690
type: SpeciesReference
stoichiometry: 1.0
species: 539518

539518
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Glycerate 2-phosphate_C3H4O7P

540139
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Fe2+_Fe

541228
type: Reaction
name: purine-nucleoside phosphorylase (Inosine)
reactant: 752515
notes: Abbreviation: R_PUNP5 Synonyms: _0 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : ins + pi <==> hxan + r1p Confidence Level: 2 Specificity not completely determined. Can also catalyse ribosyltransferase reactions of the type catalysed by EC 2.4.2.5, nucleoside ribosyltransferase genes: LOCUS:BPLAN_265#ABBREVIATION:xapA#ECNUMBERS:2.4.2.1# proteins: NAME:purine nucleoside phosphorylase#ABBREVIATION:XapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_265)
product: 752539
kinetic law: 752563
product: 752551
reversible: true
reactant: 752527
fast: false

752515
type: SpeciesReference
stoichiometry: 1.0
species: 539924

539924
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Inosine_C10H12N4O5

752539
type: SpeciesReference
stoichiometry: 1.0
species: 539796

543584
type: LocalParameter
value: 0.0

543582
type: LocalParameter
value: 0.0

543580
type: LocalParameter
value: 999999.0

543578
type: LocalParameter
value: -999999.0

752551
type: SpeciesReference
stoichiometry: 1.0
species: 540040

752527
type: SpeciesReference
stoichiometry: 1.0
species: 540013

540694
type: Reaction
kinetic law: 740585
reactant: 740537
reactant: 740549
product: 740561
fast: false
name: fructose-bisphosphatase
product: 740573
notes: Abbreviation: R_FBP Synonyms: _0 EC Number: 3.1.3.11 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : fdp + h2o --> f6p + pi Confidence Level: 2 SMP genes: LOCUS:BPLAN_130#ABBREVIATION:fbp#ECNUMBERS:3.1.3.11# proteins: NAME:fructose-1,6-bisphophatase#ABBREVIATION:Fbp# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_130)
reversible: false

542422
type: LocalParameter
value: 0.0

542421
type: LocalParameter
value: 0.0

542419
type: LocalParameter
value: 999999.0

542418
type: LocalParameter
value: 0.0

740537
type: SpeciesReference
stoichiometry: 1.0
species: 539733

740549
type: SpeciesReference
stoichiometry: 1.0
species: 539779

740561
type: SpeciesReference
stoichiometry: 1.0
species: 539730

740573
type: SpeciesReference
stoichiometry: 1.0
species: 540013

541162
type: Reaction
product: 751064
reversible: false
name: prephenate dehydratase
notes: Abbreviation: R_PPNDH Synonyms: _0 EC Number: 4.2.1.51 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : h + pphn --> co2 + h2o + phpyr Confidence Level: 2 genes: LOCUS:BPLAN_299#ABBREVIATION:pheA#ECNUMBERS:5.4.99.5,-!-,4.2.1.51# proteins: NAME:Chorismate mutase P#ABBREVIATION:PheA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_299)
fast: false
kinetic law: 751088
product: 751076
reactant: 751040
reactant: 751027
product: 751052

751064
type: SpeciesReference
stoichiometry: 1.0
species: 539779

543430
type: LocalParameter
value: 0.0

543428
type: LocalParameter
value: 0.0

543426
type: LocalParameter
value: 999999.0

543424
type: LocalParameter
value: 0.0

751076
type: SpeciesReference
stoichiometry: 1.0
species: 540011

751040
type: SpeciesReference
stoichiometry: 1.0
species: 540019

751027
type: SpeciesReference
stoichiometry: 1.0
species: 539783

751052
type: SpeciesReference
stoichiometry: 1.0
species: 539673

541429
type: Reaction
kinetic law: 757033
product: 757021
product: 757009
reactant: 756997
notes: Abbreviation: R_UPP3S Synonyms: _0 EC Number: 4.2.1.75 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : hmbil --> h2o + uppg3 Confidence Level: 2 genes: LOCUS:BPLAN_350#ABBREVIATION:hemD#ECNUMBERS:4.2.1.75# proteins: NAME:Uroporphyrinogen III synthase#ABBREVIATION:HemD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_350)
fast: false
reversible: false
name: uroporphyrinogen-III synthase

544053
type: LocalParameter
value: 0.0

544051
type: LocalParameter
value: 0.0

544049
type: LocalParameter
value: 999999.0

544047
type: LocalParameter
value: 0.0

757021
type: SpeciesReference
stoichiometry: 1.0
species: 540115

540115
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Uroporphyrinogen III_C40H36N4O16

757009
type: SpeciesReference
stoichiometry: 1.0
species: 539779

756997
type: SpeciesReference
stoichiometry: 1.0
species: 539794

539794
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Hydroxymethylbilane_C40H38N4O17

541351
type: Reaction
reactant: 755209
kinetic law: 755257
product: 755221
name: thymidine kinase (ATP:thymidine)
product: 755233
reversible: false
product: 755245
notes: Abbreviation: R_TMDK1 Synonyms: _0 EC Number: 2.7.1.21 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + thymd --> adp + dtmp + h Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reactant: 755197

755209
type: SpeciesReference
stoichiometry: 1.0
species: 540091

543871
type: LocalParameter
value: 0.0

543869
type: LocalParameter
value: 0.0

543867
type: LocalParameter
value: 999999.0

543865
type: LocalParameter
value: 0.0

755221
type: SpeciesReference
stoichiometry: 1.0
species: 539611

755233
type: SpeciesReference
stoichiometry: 1.0
species: 539719

755245
type: SpeciesReference
stoichiometry: 1.0
species: 539783

755197
type: SpeciesReference
stoichiometry: 1.0
species: 539659

540898
type: Reaction
name: Malate transport via proton symport (2 H)
product: 745213
reactant: 745189
product: 745201
reversible: false
kinetic law: 745225
fast: false
reactant: 745177
notes: Abbreviation: R_MALt2_2 Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: (2) h[e] + mal-L[e] --> (2) h[c] + mal-L[c] Confidence Level: 2 JLR genes: LOCUS:BPLAN_282#ABBREVIATION:dctA# proteins: NAME:C4-dicarboxylate transporter#ABBREVIATION:DctA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_282)

745213
type: SpeciesReference
stoichiometry: 1.0
species: 539941

539941
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Malate_C4H4O5

745189
type: SpeciesReference
stoichiometry: 1.0
species: 539942

745201
type: SpeciesReference
stoichiometry: 2.0
species: 539783

542834
type: LocalParameter
value: 0.0

542832
type: LocalParameter
value: 0.0

542831
type: LocalParameter
value: 999999.0

542829
type: LocalParameter
value: 0.0

745177
type: SpeciesReference
stoichiometry: 2.0
species: 539784

539667
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: chorismate_C10H8O6

540412
type: Reaction
notes: Abbreviation: R_CTPS2 Synonyms: _0 EC Number: 6.3.4.2 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : atp + gln-L + h2o + utp --> adp + ctp + glu-L + (2) h + pi Confidence Level: 2 genes: LOCUS:BPLAN_417#ABBREVIATION:pyrG#ECNUMBERS:6.3.4.2# proteins: NAME:CTP synthetase#ABBREVIATION:PyrG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_417)
name: CTP synthase (glutamine)
reactant: 735685
product: 735783
reactant: 735697
reactant: 735722
reversible: false
fast: false
reactant: 735710
product: 735759
product: 735734
product: 735771
product: 735747
kinetic law: 735795

735685
type: SpeciesReference
stoichiometry: 1.0
species: 539659

735783
type: SpeciesReference
stoichiometry: 1.0
species: 540013

735697
type: SpeciesReference
stoichiometry: 1.0
species: 539756

735722
type: SpeciesReference
stoichiometry: 1.0
species: 540121

735710
type: SpeciesReference
stoichiometry: 1.0
species: 539779

735759
type: SpeciesReference
stoichiometry: 1.0
species: 539760

735734
type: SpeciesReference
stoichiometry: 1.0
species: 539611

735771
type: SpeciesReference
stoichiometry: 2.0
species: 539783

735747
type: SpeciesReference
stoichiometry: 1.0
species: 539681

541868
type: LocalParameter
value: 0.0

541867
type: LocalParameter
value: 0.0

541865
type: LocalParameter
value: 999999.0

541864
type: LocalParameter
value: 0.0

540331
type: Reaction
product: 733131
reactant: 733095
name: L-arginine transport via ABC system
product: 733119
reactant: 733083
product: 733107
reactant: 733071
reversible: false
kinetic law: 733155
notes: Abbreviation: R_ARGabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: arg-L[e] + atp[c] + h2o[c] --> adp[c] + arg-L[c] + h[c] + pi[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 733143
fast: false

733131
type: SpeciesReference
stoichiometry: 1.0
species: 539783

733095
type: SpeciesReference
stoichiometry: 1.0
species: 539779

733119
type: SpeciesReference
stoichiometry: 1.0
species: 539643

733083
type: SpeciesReference
stoichiometry: 1.0
species: 539659

733107
type: SpeciesReference
stoichiometry: 1.0
species: 539611

733071
type: SpeciesReference
stoichiometry: 1.0
species: 539645

541706
type: LocalParameter
value: 0.0

541705
type: LocalParameter
value: 0.0

541703
type: LocalParameter
value: 999999.0

541702
type: LocalParameter
value: 0.0

733143
type: SpeciesReference
stoichiometry: 1.0
species: 540013

540829
type: Reaction
kinetic law: 743564
product: 743552
reactant: 743540
notes: Abbreviation: R_ICHORSi Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : chor --> ichor Confidence Level: 2 JLR- added irreversible form of ICHORS genes: LOCUS:BPLAN_443#ABBREVIATION:menF#ECNUMBERS:5.4.4.2# proteins: NAME:isochorismate synthase II#ABBREVIATION:EntC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_443)
fast: false
reversible: false
name: Isochorismate Synthase

542692
type: LocalParameter
value: 0.0

542690
type: LocalParameter
value: 0.0

542689
type: LocalParameter
value: 999999.0

542687
type: LocalParameter
value: 0.0

743552
type: SpeciesReference
stoichiometry: 1.0
species: 539797

743540
type: SpeciesReference
stoichiometry: 1.0
species: 539667

540883
type: Reaction
reactant: 744801
name: ketohexokinase
kinetic law: 744850
product: 744826
reactant: 744789
fast: false
product: 744813
product: 744838
notes: Abbreviation: R_KHK Synonyms: _0 EC Number: 2.7.1.3 SUBSYSTEM: Fructose and Mannose Metabolism Equation: [c] : atp + fru --> adp + f1p + h Confidence Level: 2 genes: LOCUS:BPLAN_006#ECNUMBERS:2.7.1.-# proteins: NAME:carbohydrate kinase citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_006)
reversible: false

744801
type: SpeciesReference
stoichiometry: 1.0
species: 539659

542804
type: LocalParameter
value: 0.0

542802
type: LocalParameter
value: 0.0

542801
type: LocalParameter
value: 999999.0

542799
type: LocalParameter
value: 0.0

744826
type: SpeciesReference
stoichiometry: 1.0
species: 539611

744789
type: SpeciesReference
stoichiometry: 1.0
species: 539744

539744
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Fructose_C6H12O6

744813
type: SpeciesReference
stoichiometry: 1.0
species: 539729

744838
type: SpeciesReference
stoichiometry: 1.0
species: 539783

540081
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: cis-tetradec-7-enoyl-[acyl-carrier protein] (n-C14:1)_C25H45N2O8PRS

539697
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Dodecanoyl-ACP (n-C12:0ACP)_C23H43N2O8PRS

541189
type: Reaction
kinetic law: 751740
product: 751728
reactant: 751715
notes: Abbreviation: R_PRMICIi Synonyms: _0 EC Number: 5.3.1.16 SUBSYSTEM: Histidine Metabolism Equation: [c] : prfp --> prlp Confidence Level: 2 JLR - added irreversible form of PRMICI genes: LOCUS:BPLAN_202#ABBREVIATION:hisA#ECNUMBERS:5.3.1.16# proteins: NAME:Phosphoribosylformimino-5-amino-1-phosphoribosyl-4-imidazole carboxamide#ABBREVIATION:HisA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_202)
fast: false
reversible: false
name: _1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (irreversible)

543493
type: LocalParameter
value: 0.0

543491
type: LocalParameter
value: 0.0

543489
type: LocalParameter
value: 999999.0

543487
type: LocalParameter
value: 0.0

751728
type: SpeciesReference
stoichiometry: 1.0
species: 540027

540027
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476

751715
type: SpeciesReference
stoichiometry: 1.0
species: 540026

540026
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476

539532
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (R)-3-Hydroxytetradecanoyl-[acyl-carrier protein]_C25H47N2O9PRS

541378
type: Reaction
kinetic law: 755823
product: 755811
product: 755799
reactant: 755787
notes: Abbreviation: R_TRPS3 Synonyms: _0 EC Number: 4.2.1.20 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : 3ig3p --> g3p + indole Confidence Level: 2 JLR genes: LOCUS:BPLAN_214#ABBREVIATION:trpA#ECNUMBERS:4.2.1.20# LOCUS:BPLAN_215#ABBREVIATION:trpB#ECNUMBERS:4.2.1.20# proteins: NAME:Tryptophan synthase#ABBREVIATION:TrpA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_214 and BPLAN_215)
fast: false
reversible: false
name: tryptophan synthase (indoleglycerol phosphate)

543934
type: LocalParameter
value: 0.0

543932
type: LocalParameter
value: 0.0

543930
type: LocalParameter
value: 999999.0

543928
type: LocalParameter
value: 0.0

755811
type: SpeciesReference
stoichiometry: 1.0
species: 539922

539922
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Indole_C8H7N

755799
type: SpeciesReference
stoichiometry: 1.0
species: 539749

539749
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Glyceraldehyde 3-phosphate_C3H5O6P

755787
type: SpeciesReference
stoichiometry: 1.0
species: 539534

540152
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Hydrogen sulfide_H2S

541363
type: Reaction
kinetic law: 755487
product: 755475
reactant: 755463
notes: Abbreviation: R_TPI Synonyms: _0 EC Number: 5.3.1.1 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : dhap <==> g3p Confidence Level: 2 SMP genes: LOCUS:BPLAN_531#ABBREVIATION:tpiA#ECNUMBERS:5.3.1.1# proteins: NAME:triosephosphate isomerase#ABBREVIATION:Tpi# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_531)
fast: false
reversible: true
name: triose-phosphate isomerase

543899
type: LocalParameter
value: 0.0

543897
type: LocalParameter
value: 0.0

543895
type: LocalParameter
value: 999999.0

543893
type: LocalParameter
value: -999999.0

755475
type: SpeciesReference
stoichiometry: 1.0
species: 539749

755463
type: SpeciesReference
stoichiometry: 1.0
species: 539702

539588
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Acetyl-ACP_C13H23N2O8PRS

539721
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dUDP_C9H11N2O11P2

540637
type: Reaction
kinetic law: 739849
product: 739837
reactant: 739824
notes: Abbreviation: R_EX_nac_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : nac <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Nicotinate exchange

542308
type: LocalParameter
value: 0.0

542307
type: LocalParameter
value: 0.0

542305
type: LocalParameter
value: 999999.0

542304
type: LocalParameter
value: -999999.0

739837
type: SpeciesReference
stoichiometry: 1.0
species: 540165

739824
type: SpeciesReference
stoichiometry: 1.0
species: 539963

541297
type: Reaction
name: shikimate dehydrogenase
notes: Abbreviation: R_SHK3Dr Synonyms: _0 EC Number: 1.1.1.25 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : 3dhsk + h + nadph <==> nadp + skm Confidence Level: 2 JLR- added reversible form of SHK3D genes: LOCUS:BPLAN_492#ABBREVIATION:ydiB#ECNUMBERS:1.1.1.25# proteins: NAME:putative shikimate 5-dehydrogenase#ABBREVIATION:YdiB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_492)
product: 754002
reactant: 753990
product: 754014
reactant: 753978
kinetic law: 754026
reactant: 753966
reversible: true
fast: false

754002
type: SpeciesReference
stoichiometry: 1.0
species: 539967

753990
type: SpeciesReference
stoichiometry: 1.0
species: 539969

754014
type: SpeciesReference
stoichiometry: 1.0
species: 540065

753978
type: SpeciesReference
stoichiometry: 1.0
species: 539783

543745
type: LocalParameter
value: 0.0

543743
type: LocalParameter
value: 0.0

543741
type: LocalParameter
value: 999999.0

543739
type: LocalParameter
value: -999999.0

753966
type: SpeciesReference
stoichiometry: 1.0
species: 539530

540943
type: Reaction
product: 746228
reactant: 746204
notes: Abbreviation: R_NADH7 Synonyms: _0 EC Number: 1.6.5.3 SUBSYSTEM: Oxidative Phosphorylation Equation: (3) h[c] + mqn8[c] + nadh[c] --> (2) h[e] + mql8[c] + nad[c] Confidence Level: 2 JLR genes: LOCUS:BPLAN_442#ABBREVIATION:ndh#ECNUMBERS:1.16.1.-,-!-,1.6.99.3# proteins: NAME:NADH dehydrogenase II#ABBREVIATION:Ndh# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_442)
kinetic law: 746264
product: 746240
reversible: false
name: NADH dehydrogenase (menaquinone-8 & 2 protons)
product: 746252
reactant: 746192
fast: false
reactant: 746216

746228
type: SpeciesReference
stoichiometry: 2.0
species: 539784

746204
type: SpeciesReference
stoichiometry: 1.0
species: 539955

542925
type: LocalParameter
value: 0.0

542923
type: LocalParameter
value: 0.0

542921
type: LocalParameter
value: 999999.0

542919
type: LocalParameter
value: 0.0

746240
type: SpeciesReference
stoichiometry: 1.0
species: 539953

746252
type: SpeciesReference
stoichiometry: 1.0
species: 539964

746192
type: SpeciesReference
stoichiometry: 3.0
species: 539783

746216
type: SpeciesReference
stoichiometry: 1.0
species: 539966

540736
type: Reaction
fast: false
product: 741481
notes: Abbreviation: R_GCALDD Synonyms: _0 EC Number: 1.2.1.21 SUBSYSTEM: Folate Metabolism Equation: [c] : gcald + h2o + nad --> glyclt + (2) h + nadh Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
name: Glycolaldehyde dehydrogenase
reactant: 741445
product: 741493
kinetic law: 741506
product: 741469
reactant: 741433
reactant: 741457
reversible: false

741481
type: SpeciesReference
stoichiometry: 2.0
species: 539783

741445
type: SpeciesReference
stoichiometry: 1.0
species: 539779

741493
type: SpeciesReference
stoichiometry: 1.0
species: 539966

542506
type: LocalParameter
value: 0.0

542505
type: LocalParameter
value: 0.0

542503
type: LocalParameter
value: 999999.0

542502
type: LocalParameter
value: 0.0

741469
type: SpeciesReference
stoichiometry: 1.0
species: 539770

539770
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Glycolate_C2H3O3

741433
type: SpeciesReference
stoichiometry: 1.0
species: 539753

741457
type: SpeciesReference
stoichiometry: 1.0
species: 539964

540622
type: Reaction
kinetic law: 739668
product: 739656
reactant: 739644
notes: Abbreviation: R_EX_leu_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : leu-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Leucine exchange

542278
type: LocalParameter
value: 0.0

542277
type: LocalParameter
value: 0.0

542275
type: LocalParameter
value: 999999.0

542274
type: LocalParameter
value: 0.0

739656
type: SpeciesReference
stoichiometry: 1.0
species: 540157

739644
type: SpeciesReference
stoichiometry: 1.0
species: 539934

540478
type: Reaction
fast: false
notes: Abbreviation: R_DHDPS Synonyms: _0 EC Number: 4.2.1.52 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : aspsa + pyr --> 23dhdp + h + (2) h2o Confidence Level: 2 genes: LOCUS:BPLAN_426#ABBREVIATION:dapA#ECNUMBERS:4.2.1.52# proteins: NAME:Dihydrodipicolinate synthetase#ABBREVIATION:DapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_426)
name: dihydrodipicolinate synthase
reactant: 737207
reactant: 737219
product: 737231
product: 737255
kinetic law: 737267
reversible: false
product: 737243

737207
type: SpeciesReference
stoichiometry: 1.0
species: 539657

737219
type: SpeciesReference
stoichiometry: 1.0
species: 540038

737231
type: SpeciesReference
stoichiometry: 1.0
species: 539484

539484
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2,3-Dihydrodipicolinate_C7H5NO4

737255
type: SpeciesReference
stoichiometry: 2.0
species: 539779

541992
type: LocalParameter
value: 0.0

541991
type: LocalParameter
value: 0.0

541989
type: LocalParameter
value: 999999.0

541988
type: LocalParameter
value: 0.0

737243
type: SpeciesReference
stoichiometry: 1.0
species: 539783

540811
type: Reaction
fast: false
product: 743171
reversible: false
product: 743159
reactant: 743135
kinetic law: 743183
reactant: 743147
notes: Abbreviation: R_HMBS Synonyms: _0 EC Number: 4.3.1.8 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : h2o + (4) ppbng --> hmbil + (4) nh4 Confidence Level: 2 genes: LOCUS:BPLAN_067#ABBREVIATION:hemC#ECNUMBERS:4.3.1.8# proteins: NAME:Hydroxymethylbilane synthase#ABBREVIATION:HemC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_067)
name: hydroxymethylbilane synthase

743171
type: SpeciesReference
stoichiometry: 4.0
species: 539970

743159
type: SpeciesReference
stoichiometry: 1.0
species: 539794

743135
type: SpeciesReference
stoichiometry: 1.0
species: 539779

542656
type: LocalParameter
value: 0.0

542654
type: LocalParameter
value: 0.0

542653
type: LocalParameter
value: 999999.0

542651
type: LocalParameter
value: 0.0

743147
type: SpeciesReference
stoichiometry: 4.0
species: 540017

540017
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Porphobilinogen_C10H13N2O4

541096
type: Reaction
fast: false
reactant: 749538
notes: Abbreviation: R_PASYN_Pam Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : glyc3p + (0.14) hdeACP + (0.04) myrsACP + octeACP + (0.72) palmACP + (0.1) tdeACP --> (2) ACP + (0.02) pa_Pam Confidence Level: 2 JLR genes: LOCUS:BPLAN_131#ABBREVIATION:plsC#ECNUMBERS:2.3.1.51# LOCUS:BPLAN_042#ABBREVIATION:plsB#ECNUMBERS:2.3.1.15# proteins: NAME:glycerolphosphate acyltransferase#ABBREVIATION:PlsB# NAME:_1-acyl-glycerol-3-phosphate acyltransferase#ABBREVIATION:PlsC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_131) and (BPLAN_042)
product: 749622
reactant: 749598
name: Phosphatidic acid synthase
reactant: 749550
product: 749610
reactant: 749586
kinetic law: 749634
reversible: false
reactant: 749562
reactant: 749574

749538
type: SpeciesReference
stoichiometry: 1.0
species: 539767

749622
type: SpeciesReference
stoichiometry: 0.02
species: 539999

749598
type: SpeciesReference
stoichiometry: 0.1
species: 540081

749550
type: SpeciesReference
stoichiometry: 0.14
species: 539789

749610
type: SpeciesReference
stoichiometry: 2.0
species: 539601

749586
type: SpeciesReference
stoichiometry: 0.72
species: 540000

540000
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Palmitoyl-ACP (n-C16:0ACP)_C27H51N2O8PRS

543276
type: LocalParameter
value: 0.0

543274
type: LocalParameter
value: 0.0

543272
type: LocalParameter
value: 999999.0

543270
type: LocalParameter
value: 0.0

749562
type: SpeciesReference
stoichiometry: 0.04
species: 539956

749574
type: SpeciesReference
stoichiometry: 1.0
species: 539988

539988
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: cis-octadec-11-enoyl-[acyl-carrier protein] (n-C18:1)_C29H53N2O8PRS

541285
type: Reaction
product: 753748
name: serine O-acetyltransferase
notes: Abbreviation: R_SERAT Synonyms: _4 EC Number: 2.3.1.30 SUBSYSTEM: Cysteine Metabolism Equation: [c] : accoa + ser-L <==> acser + coa Confidence Level: 2 genes: LOCUS:BPLAN_362#ABBREVIATION:cysE#ECNUMBERS:2.3.1.30# proteins: NAME:Serine acetyltransferase#ABBREVIATION:CysE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_362)
reactant: 753724
fast: false
reversible: true
kinetic law: 753772
reactant: 753736
product: 753760

753748
type: SpeciesReference
stoichiometry: 1.0
species: 539603

539603
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: O-Acetyl-L-serine_C5H9NO4

753724
type: SpeciesReference
stoichiometry: 1.0
species: 539590

543717
type: LocalParameter
value: 0.0

543715
type: LocalParameter
value: 0.0

543713
type: LocalParameter
value: 999999.0

543711
type: LocalParameter
value: -999999.0

753736
type: SpeciesReference
stoichiometry: 1.0
species: 540056

753760
type: SpeciesReference
stoichiometry: 1.0
species: 539677

541117
type: Reaction
product: 750118
notes: Abbreviation: R_PGK Synonyms: _0 EC Number: 2.7.2.3 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : 3pg + atp <==> 13dpg + adp Confidence Level: 2 SMP genes: LOCUS:BPLAN_346#ABBREVIATION:pgk#ECNUMBERS:2.7.2.3# proteins: NAME:phosphoglycerate kinase#ABBREVIATION:Pgk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_346)
kinetic law: 750142
reversible: true
fast: false
name: phosphoglycerate kinase
product: 750130
reactant: 750094
reactant: 750106

750118
type: SpeciesReference
stoichiometry: 1.0
species: 539480

539480
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Phospho-D-glyceroyl phosphate_C3H4O10P2

543325
type: LocalParameter
value: 0.0

543323
type: LocalParameter
value: 0.0

543321
type: LocalParameter
value: 999999.0

543319
type: LocalParameter
value: -999999.0

750130
type: SpeciesReference
stoichiometry: 1.0
species: 539611

750094
type: SpeciesReference
stoichiometry: 1.0
species: 539540

750106
type: SpeciesReference
stoichiometry: 1.0
species: 539659

541171
type: Reaction
kinetic law: 751282
product: 751270
reactant: 751258
notes: Abbreviation: R_PRAIi Synonyms: _0 EC Number: 5.3.1.24 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : pran --> 2cpr5p Confidence Level: 2 JLR- added irreversible form of PRAI genes: LOCUS:BPLAN_216#ABBREVIATION:trpF#ECNUMBERS:5.3.1.24# proteins: NAME:phosphoribosylanthranilate isomerase PRAI#ABBREVIATION:TrpF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_216)
fast: false
reversible: false
name: phosphoribosylanthranilate isomerase (irreversible)

543451
type: LocalParameter
value: 0.0

543449
type: LocalParameter
value: 0.0

543447
type: LocalParameter
value: 999999.0

543445
type: LocalParameter
value: 0.0

751270
type: SpeciesReference
stoichiometry: 1.0
species: 539500

751258
type: SpeciesReference
stoichiometry: 1.0
species: 540023

540023
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N-(5-Phospho-D-ribosyl)anthranilate_C12H13NO9P

540346
type: Reaction
name: aspartate-semialdehyde dehydrogenase
reactant: 733457
fast: false
product: 733469
reversible: false
reactant: 733433
product: 733481
kinetic law: 733505
reactant: 733445
product: 733493
notes: Abbreviation: R_ASAD Synonyms: _0 EC Number: 1.2.1.11 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : 4pasp + h + nadph --> aspsa + nadp + pi Confidence Level: 2 genes: LOCUS:BPLAN_342#ABBREVIATION:asd#ECNUMBERS:1.2.1.11# proteins: NAME:Aspartate-semialdehyde dehydrogenase#ABBREVIATION:Asd# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_342)

733457
type: SpeciesReference
stoichiometry: 1.0
species: 539969

733469
type: SpeciesReference
stoichiometry: 1.0
species: 539657

733433
type: SpeciesReference
stoichiometry: 1.0
species: 539552

733481
type: SpeciesReference
stoichiometry: 1.0
species: 539967

541736
type: LocalParameter
value: 0.0

541735
type: LocalParameter
value: 0.0

541733
type: LocalParameter
value: 999999.0

541732
type: LocalParameter
value: 0.0

733445
type: SpeciesReference
stoichiometry: 1.0
species: 539783

733493
type: SpeciesReference
stoichiometry: 1.0
species: 540013

541438
type: Reaction
product: 757177
reversible: true
notes: Abbreviation: R_URIDK2r Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dump <==> adp + dudp Confidence Level: 2 JLR- reversible form of URIDK2 genes: LOCUS:BPLAN_515#ABBREVIATION:pyrH#ECNUMBERS:2.7.4.-# proteins: NAME:uridylate kinase#ABBREVIATION:PyrH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_515)
reactant: 757153
name: uridylate kinase (dUMP)
kinetic law: 757201
fast: false
reactant: 757165
product: 757189

757177
type: SpeciesReference
stoichiometry: 1.0
species: 539611

757153
type: SpeciesReference
stoichiometry: 1.0
species: 539659

544074
type: LocalParameter
value: 0.0

544072
type: LocalParameter
value: 0.0

544070
type: LocalParameter
value: 999999.0

544068
type: LocalParameter
value: -999999.0

757165
type: SpeciesReference
stoichiometry: 1.0
species: 539722

757189
type: SpeciesReference
stoichiometry: 1.0
species: 539721

540265
type: Reaction
product: 731633
reactant: 731597
reversible: true
fast: false
product: 731621
name: adentylate kinase (ITP)
notes: Abbreviation: R_ADK4 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : amp + itp <==> adp + idp Confidence Level: 2 JLR genes: LOCUS:BPLAN_420#ABBREVIATION:adk#ECNUMBERS:2.7.4.3# proteins: NAME:Adenylate kinase#ABBREVIATION:Adk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_420)
kinetic law: 731645
reactant: 731609

731633
type: SpeciesReference
stoichiometry: 1.0
species: 539798

539798
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: IDP_C10H11N4O11P2

731597
type: SpeciesReference
stoichiometry: 1.0
species: 539638

731621
type: SpeciesReference
stoichiometry: 1.0
species: 539611

541575
type: LocalParameter
value: 0.0

541573
type: LocalParameter
value: 0.0

541572
type: LocalParameter
value: 999999.0

541570
type: LocalParameter
value: -999999.0

731609
type: SpeciesReference
stoichiometry: 1.0
species: 539927

539927
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: ITP_C10H11N4O14P3

541270
type: Reaction
kinetic law: 753480
product: 753468
reactant: 753456
notes: Abbreviation: R_RPE Synonyms: _0 EC Number: 5.1.3.1 SUBSYSTEM: Pentose Phosphate Pathway Equation: [c] : ru5p-D <==> xu5p-D Confidence Level: 2 SMP genes: LOCUS:BPLAN_293#ABBREVIATION:rpe#ECNUMBERS:5.1.3.1# proteins: NAME:D-ribulose-5-phosphate 3-epimerase#ABBREVIATION:Rpe# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_293)
fast: false
reversible: true
name: ribulose 5-phosphate 3-epimerase

543682
type: LocalParameter
value: 0.0

543680
type: LocalParameter
value: 0.0

543678
type: LocalParameter
value: 999999.0

543676
type: LocalParameter
value: -999999.0

753468
type: SpeciesReference
stoichiometry: 1.0
species: 540127

540127
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Xylulose 5-phosphate_C5H9O8P

753456
type: SpeciesReference
stoichiometry: 1.0
species: 540047

541102
type: Reaction
name: pyridoxine 5'-phosphate oxidase
reactant: 749744
notes: Abbreviation: R_PDX5PO Synonyms: _0 EC Number: 1.4.3.5 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : o2 + pdx5p --> h2o2 + pydx5p Confidence Level: 2 NCD genes: LOCUS:BPLAN_583#ABBREVIATION:pdxH#ECNUMBERS:1.4.3.5# proteins: NAME:Pyridoxine 5-phosphate oxidase#ABBREVIATION:PdxH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_583)
fast: false
product: 749768
reactant: 749732
kinetic law: 749781
reversible: false
product: 749756

749744
type: SpeciesReference
stoichiometry: 1.0
species: 540003

749768
type: SpeciesReference
stoichiometry: 1.0
species: 540036

749732
type: SpeciesReference
stoichiometry: 1.0
species: 539977

543290
type: LocalParameter
value: 0.0

543288
type: LocalParameter
value: 0.0

543286
type: LocalParameter
value: 999999.0

543284
type: LocalParameter
value: 0.0

749756
type: SpeciesReference
stoichiometry: 1.0
species: 539778

539639
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Anthranilate_C7H6NO2

541423
type: Reaction
name: UDP-3-O-acetylglucosamine deacetylase
kinetic law: 756924
product: 756912
reactant: 756876
reactant: 756888
fast: false
product: 756900
notes: Abbreviation: R_UHGADA Synonyms: _0 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : h2o + u3aga --> ac + u3hga Confidence Level: 2 tc genes: LOCUS:BPLAN_596#ABBREVIATION:lpxC#ECNUMBERS:3.5.1.-# proteins: NAME:UDP-3-O-acyl-N-acetylglucosamine deacetylase#ABBREVIATION:LpxC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_596)
reversible: false

544039
type: LocalParameter
value: 0.0

544037
type: LocalParameter
value: 0.0

544035
type: LocalParameter
value: 999999.0

544033
type: LocalParameter
value: 0.0

756912
type: SpeciesReference
stoichiometry: 1.0
species: 540100

540100
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476

756876
type: SpeciesReference
stoichiometry: 1.0
species: 539779

756888
type: SpeciesReference
stoichiometry: 1.0
species: 540098

756900
type: SpeciesReference
stoichiometry: 1.0
species: 539584

541306
type: Reaction
kinetic law: 754231
reactant: 754183
product: 754207
name: superoxide dismutase
notes: Abbreviation: R_SPODM Synonyms: _1 EC Number: 1.15.1.1 SUBSYSTEM: Unassigned Equation: [c] : (2) h + (2) o2s --> h2o2 + o2 Confidence Level: 2 JLR genes: LOCUS:BPLAN_347#ABBREVIATION:sodA#ECNUMBERS:1.15.1.1# proteins: NAME:superoxide dismutase, Mn#ABBREVIATION:SodA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_347)
reactant: 754195
fast: false
product: 754219
reversible: false

543766
type: LocalParameter
value: 0.0

543764
type: LocalParameter
value: 0.0

543762
type: LocalParameter
value: 999999.0

543760
type: LocalParameter
value: 0.0

754183
type: SpeciesReference
stoichiometry: 2.0
species: 539783

754207
type: SpeciesReference
stoichiometry: 1.0
species: 539778

754195
type: SpeciesReference
stoichiometry: 2.0
species: 539983

539983
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Superoxide anion_O2

754219
type: SpeciesReference
stoichiometry: 1.0
species: 539977

541036
type: Reaction
reactant: 748222
product: 748246
reversible: false
notes: Abbreviation: R_NTPP1 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dgtp + h2o --> dgmp + h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_237#ABBREVIATION:mazG# proteins: NAME:Nucleotide triphosphate pyrophosphohydrolase#ABBREVIATION:MazG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_237)
fast: false
name: Nucleoside triphosphate pyrophosphorylase (dgtp)
kinetic law: 748270
reactant: 748209
product: 748234
product: 748258

748222
type: SpeciesReference
stoichiometry: 1.0
species: 539779

748246
type: SpeciesReference
stoichiometry: 1.0
species: 539783

543136
type: LocalParameter
value: 0.0

543134
type: LocalParameter
value: 0.0

543132
type: LocalParameter
value: 999999.0

543130
type: LocalParameter
value: 0.0

748209
type: SpeciesReference
stoichiometry: 1.0
species: 539701

748234
type: SpeciesReference
stoichiometry: 1.0
species: 539699

748258
type: SpeciesReference
stoichiometry: 1.0
species: 540021

539757
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Glutamine_C5H10N2O3

541225
type: Reaction
reversible: true
kinetic law: 752503
product: 752491
reactant: 752455
notes: Abbreviation: R_PUNP4 Synonyms: _0 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dgsn + pi <==> 2dr1p + gua Confidence Level: 2 Specificity not completely determined. Can also catalyse ribosyltransferase reactions of the type catalysed by EC 2.4.2.5, nucleoside ribosyltransferase genes: LOCUS:BPLAN_265#ABBREVIATION:xapA#ECNUMBERS:2.4.2.1# proteins: NAME:purine nucleoside phosphorylase#ABBREVIATION:XapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_265)
name: purine-nucleoside phosphorylase (Deoxyguanosine)
reactant: 752467
product: 752479
fast: false

543577
type: LocalParameter
value: 0.0

543575
type: LocalParameter
value: 0.0

543573
type: LocalParameter
value: 999999.0

543571
type: LocalParameter
value: -999999.0

752491
type: SpeciesReference
stoichiometry: 1.0
species: 539777

752455
type: SpeciesReference
stoichiometry: 1.0
species: 539700

752467
type: SpeciesReference
stoichiometry: 1.0
species: 540013

752479
type: SpeciesReference
stoichiometry: 1.0
species: 539508

540145
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Glutamate_C5H8NO4

539986
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Oxaloacetate_C4H2O5

541081
type: Reaction
reversible: false
reactant: 749237
fast: false
reactant: 749225
kinetic law: 749273
notes: Abbreviation: R_OMCDC Synonyms: _0 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 3c4mop + h --> 4mop + co2 Confidence Level: 2 Continuation of EC 1.1.1.85 reaction genes: LOCUS:BPLAN_564#ABBREVIATION:leuB#ECNUMBERS:1.1.1.85# proteins: NAME:Isopropylmalate dehydrogenase#ABBREVIATION:LeuB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_564)
name: _2-Oxo-4-methyl-3-carboxypentanoate decarboxylation
product: 749261
product: 749249

749237
type: SpeciesReference
stoichiometry: 1.0
species: 539783

749225
type: SpeciesReference
stoichiometry: 1.0
species: 539526

539526
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Carboxy-4-methyl-2-oxopentanoate_C7H8O5

543241
type: LocalParameter
value: 0.0

543239
type: LocalParameter
value: 0.0

543237
type: LocalParameter
value: 999999.0

543235
type: LocalParameter
value: 0.0

749261
type: SpeciesReference
stoichiometry: 1.0
species: 539673

749249
type: SpeciesReference
stoichiometry: 1.0
species: 539550

540090
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Thymine_C5H6N2O2

541210
type: Reaction
fast: false
product: 752178
notes: Abbreviation: R_PSSA_Pam Synonyms: _0 EC Number: 2.7.8.8 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : (0.02) cdpdag_Pam + ser-L --> cmp + h + (0.02) ps_Pam Confidence Level: 2 tv genes: LOCUS:BPLAN_109#ABBREVIATION:pssA#ECNUMBERS:2.7.8.8# proteins: NAME:Phosphatidylserine synthase#ABBREVIATION:PssA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_109)
product: 752154
name: Phosphatidylserine syntase
product: 752166
reactant: 752130
kinetic law: 752190
reversible: false
reactant: 752142

752178
type: SpeciesReference
stoichiometry: 0.02
species: 540032

752154
type: SpeciesReference
stoichiometry: 1.0
species: 539671

752166
type: SpeciesReference
stoichiometry: 1.0
species: 539783

752130
type: SpeciesReference
stoichiometry: 0.02
species: 539665

543542
type: LocalParameter
value: 0.0

543540
type: LocalParameter
value: 0.0

543538
type: LocalParameter
value: 999999.0

543536
type: LocalParameter
value: 0.0

752142
type: SpeciesReference
stoichiometry: 1.0
species: 540056

539714
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _6,7-Dimethyl-8-(1-D-ribityl)lumazine_C13H18N4O6

539773
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Geranyl diphosphate_C10H17O7P2

539791
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Histidine_C6H9N3O2

540607
type: Reaction
kinetic law: 739486
product: 739474
reactant: 739462
notes: Abbreviation: R_EX_h2s_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : h2s <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Hydrogen sulfide exchange

542248
type: LocalParameter
value: 0.0

542247
type: LocalParameter
value: 0.0

542245
type: LocalParameter
value: 999999.0

542244
type: LocalParameter
value: -999999.0

739474
type: SpeciesReference
stoichiometry: 1.0
species: 540152

739462
type: SpeciesReference
stoichiometry: 1.0
species: 539782

539782
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Hydrogen sulfide_H2S

540913
type: Reaction
notes: Abbreviation: R_METAT Synonyms: _0 EC Number: 2.5.1.6 SUBSYSTEM: Methionine Metabolism Equation: [c] : atp + h2o + met-L --> amet + pi + ppi Confidence Level: 2 genes: LOCUS:BPLAN_295#ABBREVIATION:metK#ECNUMBERS:2.5.1.6# proteins: NAME:methionine adenosyltransferase I#ABBREVIATION:MetK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_295)
reversible: false
reactant: 745537
reactant: 745549
name: methionine adenosyltransferase
reactant: 745561
kinetic law: 745611
fast: false
product: 745587
product: 745574
product: 745599

745537
type: SpeciesReference
stoichiometry: 1.0
species: 539659

745549
type: SpeciesReference
stoichiometry: 1.0
species: 539779

745561
type: SpeciesReference
stoichiometry: 1.0
species: 539945

542864
type: LocalParameter
value: 0.0

542862
type: LocalParameter
value: 0.0

542861
type: LocalParameter
value: 999999.0

542859
type: LocalParameter
value: 0.0

745587
type: SpeciesReference
stoichiometry: 1.0
species: 540013

745574
type: SpeciesReference
stoichiometry: 1.0
species: 539636

745599
type: SpeciesReference
stoichiometry: 1.0
species: 540021

540556
type: Reaction
kinetic law: 738871
product: 738859
reactant: 738847
notes: Abbreviation: R_EX_arg_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : arg-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Arginine exchange

542146
type: LocalParameter
value: 0.0

542145
type: LocalParameter
value: 0.0

542143
type: LocalParameter
value: 999999.0

542142
type: LocalParameter
value: 0.0

738859
type: SpeciesReference
stoichiometry: 1.0
species: 540133

540133
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Arginine_C6H15N4O2

738847
type: SpeciesReference
stoichiometry: 1.0
species: 539645

540439
type: Reaction
product: 736434
fast: false
kinetic law: 736458
reactant: 736410
product: 736446
reactant: 736398
reversible: false
name: Deoxyadenosine deaminase
notes: Abbreviation: R_DADA Synonyms: _0 EC Number: 3.5.4.4 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dad-2 + h + h2o --> din + nh4 Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 736422

736434
type: SpeciesReference
stoichiometry: 1.0
species: 539712

541921
type: LocalParameter
value: 0.0

541919
type: LocalParameter
value: 0.0

541918
type: LocalParameter
value: 999999.0

541916
type: LocalParameter
value: 0.0

736410
type: SpeciesReference
stoichiometry: 1.0
species: 539783

736446
type: SpeciesReference
stoichiometry: 1.0
species: 539970

736398
type: SpeciesReference
stoichiometry: 1.0
species: 539686

736422
type: SpeciesReference
stoichiometry: 1.0
species: 539779

540745
type: Reaction
product: 741712
reactant: 741663
name: L-glutamine transport via ABC system
reactant: 741651
notes: Abbreviation: R_GLNabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + gln-L[e] + h2o[c] --> adp[c] + gln-L[c] + h[c] + pi[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 741700
reactant: 741639
product: 741688
reversible: false
kinetic law: 741725
fast: false
product: 741675

741712
type: SpeciesReference
stoichiometry: 1.0
species: 540013

741663
type: SpeciesReference
stoichiometry: 1.0
species: 539779

741651
type: SpeciesReference
stoichiometry: 1.0
species: 539757

741700
type: SpeciesReference
stoichiometry: 1.0
species: 539783

741639
type: SpeciesReference
stoichiometry: 1.0
species: 539659

741688
type: SpeciesReference
stoichiometry: 1.0
species: 539756

542524
type: LocalParameter
value: 0.0

542523
type: LocalParameter
value: 0.0

542521
type: LocalParameter
value: 999999.0

542520
type: LocalParameter
value: 0.0

741675
type: SpeciesReference
stoichiometry: 1.0
species: 539611

539524
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Carboxy-3-hydroxy-4-methylpentanoate_C7H10O5

540424
type: Reaction
reactant: 736061
product: 736097
product: 736085
reactant: 736073
name: cytochrome oxidase bo3 (ubiquinol-8: 2.5 protons)
kinetic law: 736121
reactant: 736049
product: 736109
notes: Abbreviation: R_CYTBO3 Synonyms: _0 SUBSYSTEM: Oxidative Phosphorylation Equation: (2.5) h[c] + (0.5) o2[c] + mql8[c] --> (2.5) h[e] + h2o[c] + mqn8[c] Confidence Level: 2 EC Number: 1.9.3.1 genes: LOCUS:BPLAN_228#ABBREVIATION:cyoC#ECNUMBERS:1.9.3.1# LOCUS:BPLAN_226#ABBREVIATION:cyoBA#ECNUMBERS:1.9.3.1# proteins: NAME:cytochrome oxidase bo3#ABBREVIATION:CyoABC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_228 and BPLAN_226)
fast: false
reversible: false

736061
type: SpeciesReference
stoichiometry: 0.5
species: 539977

736097
type: SpeciesReference
stoichiometry: 1.0
species: 539779

736085
type: SpeciesReference
stoichiometry: 2.5
species: 539784

736073
type: SpeciesReference
stoichiometry: 1.0
species: 539953

541892
type: LocalParameter
value: 0.0

541891
type: LocalParameter
value: 0.0

541889
type: LocalParameter
value: 999999.0

541888
type: LocalParameter
value: 0.0

736049
type: SpeciesReference
stoichiometry: 2.5
species: 539783

736109
type: SpeciesReference
stoichiometry: 1.0
species: 539955

540826
type: Reaction
reactant: 743475
product: 743501
reactant: 743488
product: 743514
fast: false
kinetic law: 743527
reversible: true
name: histidinol-phosphate transaminase
notes: Abbreviation: R_HSTPT Synonyms: _0 EC Number: 2.6.1.9 SUBSYSTEM: Histidine Metabolism Equation: [c] : glu-L + imacp <==> akg + hisp Confidence Level: 2 genes: LOCUS:BPLAN_205#ABBREVIATION:hisC#ECNUMBERS:2.6.1.9# proteins: NAME:Histidinol phosphate aminotransferase#ABBREVIATION:HisC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_205)

743475
type: SpeciesReference
stoichiometry: 1.0
species: 539760

743501
type: SpeciesReference
stoichiometry: 1.0
species: 539622

743488
type: SpeciesReference
stoichiometry: 1.0
species: 539919

743514
type: SpeciesReference
stoichiometry: 1.0
species: 539792

539792
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Histidinol phosphate_C6H11N3O4P

542686
type: LocalParameter
value: 0.0

542684
type: LocalParameter
value: 0.0

542683
type: LocalParameter
value: 999999.0

542681
type: LocalParameter
value: -999999.0

540730
type: Reaction
kinetic law: 741348
reactant: 741274
reversible: true
name: glyceraldehyde-3-phosphate dehydrogenase
reactant: 741299
reactant: 741286
fast: false
product: 741323
product: 741311
notes: Abbreviation: R_GAPD Synonyms: _0 EC Number: 1.2.1.12 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : g3p + nad + pi <==> 13dpg + h + nadh Confidence Level: 2 SMP genes: LOCUS:BPLAN_590#ABBREVIATION:gapA#ECNUMBERS:1.2.1.12# proteins: NAME:glyceraldehyde-3-phosphate dehydrogenase A#ABBREVIATION:GapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_590)
product: 741335

542494
type: LocalParameter
value: 0.0

542493
type: LocalParameter
value: 0.0

542491
type: LocalParameter
value: 999999.0

542490
type: LocalParameter
value: -999999.0

741274
type: SpeciesReference
stoichiometry: 1.0
species: 539749

741299
type: SpeciesReference
stoichiometry: 1.0
species: 540013

741286
type: SpeciesReference
stoichiometry: 1.0
species: 539964

741323
type: SpeciesReference
stoichiometry: 1.0
species: 539783

741311
type: SpeciesReference
stoichiometry: 1.0
species: 539480

741335
type: SpeciesReference
stoichiometry: 1.0
species: 539966

541141
type: Reaction
notes: Abbreviation: R_PNTOt4 Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: na1[e] + pnto-R[e] --> na1[c] + pnto-R[c] Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 750580
kinetic law: 750616
name: Pantothenate sodium symporter
product: 750592
fast: false
reactant: 750568
reversible: false
product: 750604

750580
type: SpeciesReference
stoichiometry: 1.0
species: 540016

543381
type: LocalParameter
value: 0.0

543379
type: LocalParameter
value: 0.0

543377
type: LocalParameter
value: 999999.0

543375
type: LocalParameter
value: 0.0

750592
type: SpeciesReference
stoichiometry: 1.0
species: 539958

750568
type: SpeciesReference
stoichiometry: 1.0
species: 539959

750604
type: SpeciesReference
stoichiometry: 1.0
species: 540015

540015
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (R)-Pantothenate_C9H16NO5

541090
type: Reaction
reactant: 749418
fast: false
name: _2-oxoglutarate decarboxylase
notes: Abbreviation: R_OXGDC2 Synonyms: _1 EC Number: 4.1.1.71 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : akg + h + thmpp --> co2 + ssaltpp Confidence Level: 2 JLR genes: LOCUS:BPLAN_577#ABBREVIATION:menD#ECNUMBERS:4.1.1.71,-!-,2.2.1.9# proteins: NAME:bifunctional 2-oxoglutarate decarboxylase/2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase#ABBREVIATION:MenD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_577)
reactant: 749430
product: 749442
reactant: 749406
product: 749454
kinetic law: 749466
reversible: false

749418
type: SpeciesReference
stoichiometry: 1.0
species: 539783

749430
type: SpeciesReference
stoichiometry: 1.0
species: 540086

749442
type: SpeciesReference
stoichiometry: 1.0
species: 539673

749406
type: SpeciesReference
stoichiometry: 1.0
species: 539622

749454
type: SpeciesReference
stoichiometry: 1.0
species: 540074

543262
type: LocalParameter
value: 0.0

543260
type: LocalParameter
value: 0.0

543258
type: LocalParameter
value: 999999.0

543256
type: LocalParameter
value: 0.0

541408
type: Reaction
product: 756549
reversible: false
product: 756537
notes: Abbreviation: R_UAMAS Synonyms: _0 EC Number: 6.3.2.8 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : ala-L + atp + uamr --> adp + h + pi + uama Confidence Level: 2 genes: LOCUS:BPLAN_257#ABBREVIATION:murC#ECNUMBERS:6.3.2.8# proteins: NAME:UDP-N-acetylmuramate-alanine ligase#ABBREVIATION:MurC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_257)
reactant: 756477
product: 756513
kinetic law: 756561
reactant: 756501
fast: false
reactant: 756489
product: 756525
name: UDP-N-acetylmuramoyl-L-alanine synthetase

756549
type: SpeciesReference
stoichiometry: 1.0
species: 540105

756537
type: SpeciesReference
stoichiometry: 1.0
species: 540013

756477
type: SpeciesReference
stoichiometry: 1.0
species: 539628

756513
type: SpeciesReference
stoichiometry: 1.0
species: 539611

544004
type: LocalParameter
value: 0.0

544002
type: LocalParameter
value: 0.0

544000
type: LocalParameter
value: 999999.0

543998
type: LocalParameter
value: 0.0

756501
type: SpeciesReference
stoichiometry: 1.0
species: 540107

756489
type: SpeciesReference
stoichiometry: 1.0
species: 539659

756525
type: SpeciesReference
stoichiometry: 1.0
species: 539783

541111
type: Reaction
kinetic law: 750009
product: 749997
reactant: 749985
notes: Abbreviation: R_PGAMT Synonyms: _0 EC Number: 5.4.2.10 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : gam1p <==> gam6p Confidence Level: 2 involved in the pathway for bacterial cell-wall peptidoglycan and lipopolysaccharide biosyntheses, being an essential step in the pathway for UDP-N-acetylglucosamine biosynthesis. genes: LOCUS:BPLAN_476#ABBREVIATION:manB#ECNUMBERS:5.4.2.10# proteins: NAME:phosphoglucomutase/phosphomannomutase family protein#ABBREVIATION:manB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_476)
fast: false
reversible: true
name: phosphoglucosamine mutase

543311
type: LocalParameter
value: 0.0

543309
type: LocalParameter
value: 0.0

543307
type: LocalParameter
value: 999999.0

543305
type: LocalParameter
value: -999999.0

749997
type: SpeciesReference
stoichiometry: 1.0
species: 539751

749985
type: SpeciesReference
stoichiometry: 1.0
species: 539750

539669
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: L-Citrulline_C6H13N3O3

540790
type: Reaction
reversible: false
reactant: 742696
product: 742732
name: guanine deaminase
reactant: 742708
reactant: 742684
notes: Abbreviation: R_GUAD Synonyms: _0 EC Number: 3.5.4.3 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : gua + h + h2o --> nh4 + xan Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
kinetic law: 742744
product: 742720

742696
type: SpeciesReference
stoichiometry: 1.0
species: 539783

742732
type: SpeciesReference
stoichiometry: 1.0
species: 540124

742708
type: SpeciesReference
stoichiometry: 1.0
species: 539779

742684
type: SpeciesReference
stoichiometry: 1.0
species: 539777

542614
type: LocalParameter
value: 0.0

542612
type: LocalParameter
value: 0.0

542611
type: LocalParameter
value: 999999.0

542609
type: LocalParameter
value: 0.0

742720
type: SpeciesReference
stoichiometry: 1.0
species: 539970

540541
type: Reaction
product: 738640
reactant: 738628
reactant: 738616
fast: false
product: 738666
name: Erythrose 4-phosphate dehydrogenase
reversible: true
reactant: 738604
product: 738653
notes: Abbreviation: R_E4PD Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : e4p + h2o + nad <==> 4per + (2) h + nadh Confidence Level: 2 JLR- Reaction from KEGG R01825 genes: LOCUS:BPLAN_590#ABBREVIATION:gapA#ECNUMBERS:1.2.1.9# proteins: NAME:Erythrose-4-phosphate dehydrogenase#ABBREVIATION:gapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_590)
kinetic law: 738678

738640
type: SpeciesReference
stoichiometry: 1.0
species: 539554

539554
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _4-Phospho-D-erythronate_C4H6O8P

738628
type: SpeciesReference
stoichiometry: 1.0
species: 539964

738616
type: SpeciesReference
stoichiometry: 1.0
species: 539779

738666
type: SpeciesReference
stoichiometry: 1.0
species: 539966

738604
type: SpeciesReference
stoichiometry: 1.0
species: 539727

539727
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Erythrose 4-phosphate_C4H7O7P

738653
type: SpeciesReference
stoichiometry: 2.0
species: 539783

542116
type: LocalParameter
value: 0.0

542115
type: LocalParameter
value: 0.0

542113
type: LocalParameter
value: 999999.0

542112
type: LocalParameter
value: -999999.0

540895
type: Reaction
product: 745153
reactant: 745093
reactant: 745105
kinetic law: 745165
fast: false
name: L-lysine transport via ABC system
product: 745129
reversible: false
product: 745117
notes: Abbreviation: R_LYSabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + h2o[c] + lys-L[e] --> adp[c] + h[c] + lys-L[c] + pi[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 745080
product: 745141

745153
type: SpeciesReference
stoichiometry: 1.0
species: 540013

745093
type: SpeciesReference
stoichiometry: 1.0
species: 539779

745105
type: SpeciesReference
stoichiometry: 1.0
species: 539937

542828
type: LocalParameter
value: 0.0

542826
type: LocalParameter
value: 0.0

542825
type: LocalParameter
value: 999999.0

542823
type: LocalParameter
value: 0.0

745129
type: SpeciesReference
stoichiometry: 1.0
species: 539783

745117
type: SpeciesReference
stoichiometry: 1.0
species: 539611

745080
type: SpeciesReference
stoichiometry: 1.0
species: 539659

745141
type: SpeciesReference
stoichiometry: 1.0
species: 539936

540880
type: Reaction
kinetic law: 744777
product: 744740
product: 744753
reactant: 744715
fast: false
reactant: 744691
reactant: 744703
reversible: false
notes: Abbreviation: R_KAS16 Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : ddcaACP + (2) h + malACP + nadph --> 3hmrsACP + ACP + co2 + nadp Confidence Level: 2 JLR- takes C12:0-ACP fatty acid part way through the elongation cycle. genes: LOCUS:BPLAN_576#ABBREVIATION:fabG#ECNUMBERS:1.1.1.100# LOCUS:BPLAN_555#ABBREVIATION:fabF#ECNUMBERS:2.3.1.179# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase II#ABBREVIATION:FabF# NAME:_3-oxoacyl-ACP reductase#ABBREVIATION:FabG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_555) and (BPLAN_576)
name: _3-hydroxy-myristoyl-ACP synthesis
reactant: 744679
product: 744765
product: 744728

542798
type: LocalParameter
value: 0.0

542796
type: LocalParameter
value: 0.0

542795
type: LocalParameter
value: 999999.0

542793
type: LocalParameter
value: 0.0

744740
type: SpeciesReference
stoichiometry: 1.0
species: 539601

744753
type: SpeciesReference
stoichiometry: 1.0
species: 539673

744715
type: SpeciesReference
stoichiometry: 1.0
species: 539969

744691
type: SpeciesReference
stoichiometry: 2.0
species: 539783

744703
type: SpeciesReference
stoichiometry: 1.0
species: 539939

744679
type: SpeciesReference
stoichiometry: 1.0
species: 539697

744765
type: SpeciesReference
stoichiometry: 1.0
species: 539967

744728
type: SpeciesReference
stoichiometry: 1.0
species: 539532

540616
type: Reaction
kinetic law: 739595
product: 739583
reactant: 739571
notes: Abbreviation: R_EX_ile_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : ile-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Isoleucine exchange

542266
type: LocalParameter
value: 0.0

542265
type: LocalParameter
value: 0.0

542263
type: LocalParameter
value: 999999.0

542262
type: LocalParameter
value: 0.0

739583
type: SpeciesReference
stoichiometry: 1.0
species: 540155

739571
type: SpeciesReference
stoichiometry: 1.0
species: 539917

539917
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Isoleucine_C6H13NO2

541375
type: Reaction
notes: Abbreviation: R_TRPS2 Synonyms: _0 EC Number: 4.2.1.20 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : indole + ser-L --> h2o + trp-L Confidence Level: 2 A pyridoxal-phosphate protein. Also catalyses the conversion of serine and indole into tryptophan and water, and of indoleglycerol phosphate into indole and glyceraldehyde phosphate (the latter reaction was listed formerly as EC 4.1.2.8). genes: LOCUS:BPLAN_214#ABBREVIATION:trpA#ECNUMBERS:4.2.1.20# LOCUS:BPLAN_215#ABBREVIATION:trpB#ECNUMBERS:4.2.1.20# proteins: NAME:Tryptophan synthase#ABBREVIATION:TrpA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_214 and BPLAN_215)
reversible: false
fast: false
product: 755763
reactant: 755739
product: 755751
kinetic law: 755775
name: tryptophan synthase (indole)
reactant: 755727

755763
type: SpeciesReference
stoichiometry: 1.0
species: 540094

755739
type: SpeciesReference
stoichiometry: 1.0
species: 540056

755751
type: SpeciesReference
stoichiometry: 1.0
species: 539779

543927
type: LocalParameter
value: 0.0

543925
type: LocalParameter
value: 0.0

543923
type: LocalParameter
value: 999999.0

543921
type: LocalParameter
value: 0.0

755727
type: SpeciesReference
stoichiometry: 1.0
species: 539922

539576
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-Methyltetrahydrofolate_C20H24N7O6

540601
type: Reaction
kinetic law: 739414
product: 739402
reactant: 739390
notes: Abbreviation: R_EX_glyclt_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : glyclt <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Glycolate exchange

542236
type: LocalParameter
value: 0.0

542235
type: LocalParameter
value: 0.0

542233
type: LocalParameter
value: 999999.0

542232
type: LocalParameter
value: 0.0

739402
type: SpeciesReference
stoichiometry: 1.0
species: 540150

739390
type: SpeciesReference
stoichiometry: 1.0
species: 539771

539736
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Fe2+_Fe

540526
type: Reaction
fast: false
notes: Abbreviation: R_DTMPK Synonyms: _0 EC Number: 2.7.4.9 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dtmp <==> adp + dtdp Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 738291
reactant: 738279
kinetic law: 738315
name: dTMP kinase
reactant: 738267
reversible: true
product: 738303

738291
type: SpeciesReference
stoichiometry: 1.0
species: 539611

738279
type: SpeciesReference
stoichiometry: 1.0
species: 539719

542086
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value: 0.0

542085
type: LocalParameter
value: 0.0

542083
type: LocalParameter
value: 999999.0

542082
type: LocalParameter
value: -999999.0

738267
type: SpeciesReference
stoichiometry: 1.0
species: 539659

738303
type: SpeciesReference
stoichiometry: 1.0
species: 539718

539718
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dTDP_C10H13N2O11P2

540018
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Porphobilinogen_C10H13N2O4

541402
type: Reaction
product: 756357
product: 756333
reactant: 756309
kinetic law: 756369
name: UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
reactant: 756321
notes: Abbreviation: R_UAGPT3 Synonyms: _0 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : uacgam + uagmda --> h + uaagmda + udp Confidence Level: 2 No exact EC number yet: EC 2.4.1.- catalyzed by murG gene in Bacillus subtilis Also found in H. pylori. Ref: Mendz pg 161 (tv) genes: LOCUS:BPLAN_256#ABBREVIATION:murG#ECNUMBERS:2.4.1.227# proteins: NAME:N-acetylglucosamine transferase#ABBREVIATION:MurG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_256)
reversible: false
fast: false
product: 756345

756357
type: SpeciesReference
stoichiometry: 1.0
species: 540111

756333
type: SpeciesReference
stoichiometry: 1.0
species: 539783

756309
type: SpeciesReference
stoichiometry: 1.0
species: 540103

543990
type: LocalParameter
value: 0.0

543988
type: LocalParameter
value: 0.0

543986
type: LocalParameter
value: 999999.0

543984
type: LocalParameter
value: 0.0

756321
type: SpeciesReference
stoichiometry: 1.0
species: 540104

756345
type: SpeciesReference
stoichiometry: 1.0
species: 540101

540997
type: Reaction
product: 747475
fast: false
name: nicotinate-nucleotide adenylyltransferase
product: 747463
kinetic law: 747487
reactant: 747426
notes: Abbreviation: R_NNAT Synonyms: _0 EC Number: 2.7.7.18 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + h + nicrnt --> dnad + ppi Confidence Level: 2 genes: LOCUS:BPLAN_313#ABBREVIATION:nadD#ECNUMBERS:2.7.7.18# proteins: NAME:Nicotinic acid mononucleotide adenyltransferase#ABBREVIATION:NadD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_313)
reactant: 747438
reactant: 747451
reversible: false

747475
type: SpeciesReference
stoichiometry: 1.0
species: 540021

747463
type: SpeciesReference
stoichiometry: 1.0
species: 539716

543045
type: LocalParameter
value: 0.0

543043
type: LocalParameter
value: 0.0

543041
type: LocalParameter
value: 999999.0

543039
type: LocalParameter
value: 0.0

747426
type: SpeciesReference
stoichiometry: 1.0
species: 539659

747438
type: SpeciesReference
stoichiometry: 1.0
species: 539783

747451
type: SpeciesReference
stoichiometry: 1.0
species: 539973

541015
type: Reaction
product: 747812
product: 747824
reactant: 747800
notes: Abbreviation: R_NTD3 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dcmp + h2o --> dcyt + pi Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 747788
kinetic law: 747836
reversible: false
fast: false
name: _5'-nucleotidase (dCMP)

747812
type: SpeciesReference
stoichiometry: 1.0
species: 539696

747824
type: SpeciesReference
stoichiometry: 1.0
species: 540013

747800
type: SpeciesReference
stoichiometry: 1.0
species: 539779

747788
type: SpeciesReference
stoichiometry: 1.0
species: 539694

543087
type: LocalParameter
value: 0.0

543085
type: LocalParameter
value: 0.0

543083
type: LocalParameter
value: 999999.0

543081
type: LocalParameter
value: 0.0

540095
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Tryptophan_C11H12N2O2

540580
type: Reaction
kinetic law: 739161
product: 739149
reactant: 739137
notes: Abbreviation: R_EX_fru_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : fru <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: D-Fructose exchange

542194
type: LocalParameter
value: 0.0

542193
type: LocalParameter
value: 0.0

542191
type: LocalParameter
value: 999999.0

542190
type: LocalParameter
value: 0.0

739149
type: SpeciesReference
stoichiometry: 1.0
species: 540142

540142
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: D-Fructose_C6H12O6

739137
type: SpeciesReference
stoichiometry: 1.0
species: 539746

539546
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _4-amino-4-deoxychorismate_C10H10NO5

540700
type: Reaction
notes: Abbreviation: R_FMNAT Synonyms: _0 EC Number: 2.7.7.2 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + fmn + h --> fad + ppi Confidence Level: 2 genes: LOCUS:BPLAN_562#ABBREVIATION:ribF#ECNUMBERS:2.7.1.26,-!-,2.7.7.2# proteins: NAME:Flavokinase and FAD synthetase#ABBREVIATION:RibF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_562)
name: FMN adenylyltransferase
product: 740731
reactant: 740706
product: 740743
kinetic law: 740755
fast: false
reactant: 740718
reversible: false
reactant: 740694

740731
type: SpeciesReference
stoichiometry: 1.0
species: 539731

740706
type: SpeciesReference
stoichiometry: 1.0
species: 539738

740743
type: SpeciesReference
stoichiometry: 1.0
species: 540021

542434
type: LocalParameter
value: 0.0

542433
type: LocalParameter
value: 0.0

542431
type: LocalParameter
value: 999999.0

542430
type: LocalParameter
value: 0.0

740718
type: SpeciesReference
stoichiometry: 1.0
species: 539783

740694
type: SpeciesReference
stoichiometry: 1.0
species: 539659

540475
type: Reaction
reversible: false
fast: false
name: dihydrodipicolinate reductase (NADPH)
notes: Abbreviation: R_DHDPRy Synonyms: _0 EC Number: 1.3.1.26 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : 23dhdp + h + nadph --> nadp + thdp Confidence Level: 2 genes: LOCUS:BPLAN_090#ABBREVIATION:dapB#ECNUMBERS:1.3.1.26# proteins: NAME:Dihydrodipicolinate reductase#ABBREVIATION:DapB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_090)
reactant: 737159
reactant: 737135
reactant: 737147
product: 737183
product: 737171
kinetic law: 737195

737159
type: SpeciesReference
stoichiometry: 1.0
species: 539969

737135
type: SpeciesReference
stoichiometry: 1.0
species: 539484

737147
type: SpeciesReference
stoichiometry: 1.0
species: 539783

737183
type: SpeciesReference
stoichiometry: 1.0
species: 540082

540082
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2,3,4,5-Tetrahydrodipicolinate_C7H7NO4

737171
type: SpeciesReference
stoichiometry: 1.0
species: 539967

541987
type: LocalParameter
value: 0.0

541985
type: LocalParameter
value: 0.0

541984
type: LocalParameter
value: 999999.0

541982
type: LocalParameter
value: 0.0

540328
type: Reaction
product: 733047
reactant: 732998
reversible: false
notes: Abbreviation: R_APRAUR Synonyms: _0 EC Number: 1.1.1.193 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 5apru + h + nadph --> 5aprbu + nadp Confidence Level: 2 genes: LOCUS:BPLAN_491#ABBREVIATION:ribD#ECNUMBERS:3.5.4.26,-!-,1.1.1.193# proteins: NAME:pyrimidine deaminase and pyrimidine reductase#ABBREVIATION:RibD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_491)
product: 733035
fast: false
reactant: 733023
name: _5-amino-6-(5-phosphoribosylamino)uracil reductase
kinetic law: 733059
reactant: 733010

733047
type: SpeciesReference
stoichiometry: 1.0
species: 539967

732998
type: SpeciesReference
stoichiometry: 1.0
species: 539566

733035
type: SpeciesReference
stoichiometry: 1.0
species: 539564

539564
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-Amino-6-(5'-phosphoribitylamino)uracil_C9H15N4O9P

733023
type: SpeciesReference
stoichiometry: 1.0
species: 539969

541700
type: LocalParameter
value: 0.0

541699
type: LocalParameter
value: 0.0

541697
type: LocalParameter
value: 999999.0

541696
type: LocalParameter
value: 0.0

733010
type: SpeciesReference
stoichiometry: 1.0
species: 539783

540865
type: Reaction
product: 744315
reactant: 744279
fast: false
name: _2-isopropylmalate synthase
product: 744339
kinetic law: 744352
reversible: false
reactant: 744291
product: 744327
notes: Abbreviation: R_IPPS Synonyms: _0 EC Number: 4.1.3.12 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 3mob + accoa + h2o --> 3c3hmp + coa + h Confidence Level: 2 genes: LOCUS:BPLAN_567#ABBREVIATION:leuA#ECNUMBERS:4.1.3.12# proteins: NAME:Isopropylmalate synthase#ABBREVIATION:LeuA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_567)
reactant: 744303

744315
type: SpeciesReference
stoichiometry: 1.0
species: 539524

744279
type: SpeciesReference
stoichiometry: 1.0
species: 539536

744339
type: SpeciesReference
stoichiometry: 1.0
species: 539783

542768
type: LocalParameter
value: 0.0

542766
type: LocalParameter
value: 0.0

542765
type: LocalParameter
value: 999999.0

542763
type: LocalParameter
value: 0.0

744291
type: SpeciesReference
stoichiometry: 1.0
species: 539590

744327
type: SpeciesReference
stoichiometry: 1.0
species: 539677

744303
type: SpeciesReference
stoichiometry: 1.0
species: 539779

541060
type: Reaction
name: Nucleoside triphosphate tripolyhydrolase
reversible: false
kinetic law: 748840
product: 748828
fast: false
product: 748816
reactant: 748804
notes: Abbreviation: R_NTPTP1 Synonyms: _0 EC Number: 3.1.5.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dgtp + h2o --> dgsn + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_029#ABBREVIATION:dgt#ECNUMBERS:3.1.5.1# proteins: NAME:putative transmembrane HD family protein#ABBREVIATION:Dgt# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_029)
reactant: 748792

543192
type: LocalParameter
value: 0.0

543190
type: LocalParameter
value: 0.0

543188
type: LocalParameter
value: 999999.0

543186
type: LocalParameter
value: 0.0

748828
type: SpeciesReference
stoichiometry: 1.0
species: 540021

748816
type: SpeciesReference
stoichiometry: 1.0
species: 539700

748804
type: SpeciesReference
stoichiometry: 1.0
species: 539779

748792
type: SpeciesReference
stoichiometry: 1.0
species: 539701

541204
type: Reaction
notes: Abbreviation: R_PSERT Synonyms: _0 EC Number: 2.6.1.52 SUBSYSTEM: Glycine and Serine Metabolism Equation: [c] : 3php + glu-L <==> akg + pser-L Confidence Level: 2 genes: LOCUS:BPLAN_212#ABBREVIATION:serC#ECNUMBERS:2.6.1.52# LOCUS:BPLAN_490#ABBREVIATION:serC#ECNUMBERS:2.6.1.52# proteins: NAME:Phosphoserine aminotransferase#ABBREVIATION:SerC# NAME:Phosphoserine aminotransferase#ABBREVIATION:SerC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_212) or (BPLAN_490)
name: phosphoserine transaminase
reactant: 752019
fast: false
reactant: 752007
product: 752044
product: 752032
kinetic law: 752056
reversible: true

752019
type: SpeciesReference
stoichiometry: 1.0
species: 539760

752007
type: SpeciesReference
stoichiometry: 1.0
species: 539542

752044
type: SpeciesReference
stoichiometry: 1.0
species: 540033

752032
type: SpeciesReference
stoichiometry: 1.0
species: 539622

543528
type: LocalParameter
value: 0.0

543526
type: LocalParameter
value: 0.0

543524
type: LocalParameter
value: 999999.0

543522
type: LocalParameter
value: -999999.0

540409
type: Reaction
name: Cytosine deaminase
reactant: 735612
reactant: 735625
reversible: false
fast: false
kinetic law: 735673
notes: Abbreviation: R_CSND Synonyms: _0 EC Number: 3.5.4.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : csn + h + h2o --> nh4 + ura Confidence Level: 2 JLR genes: LOCUS:BPLAN_287#ABBREVIATION:codA#ECNUMBERS:3.5.4.1# proteins: NAME:cytosine deaminase#ABBREVIATION:CodA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_287)
product: 735649
reactant: 735637
product: 735661

735612
type: SpeciesReference
stoichiometry: 1.0
species: 539679

735625
type: SpeciesReference
stoichiometry: 1.0
species: 539783

541862
type: LocalParameter
value: 0.0

541861
type: LocalParameter
value: 0.0

541859
type: LocalParameter
value: 999999.0

541858
type: LocalParameter
value: 0.0

735649
type: SpeciesReference
stoichiometry: 1.0
species: 539970

735637
type: SpeciesReference
stoichiometry: 1.0
species: 539779

735661
type: SpeciesReference
stoichiometry: 1.0
species: 540116

540116
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Uracil_C4H4N2O2

540343
type: Reaction
name: argininosuccinate synthase
reactant: 733361
fast: false
reversible: false
product: 733385
reactant: 733349
product: 733373
product: 733409
kinetic law: 733421
notes: Abbreviation: R_ARGSS Synonyms: _0 EC Number: 6.3.4.5 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : asp-L + atp + citr-L --> amp + argsuc + h + ppi Confidence Level: 2 genes: LOCUS:BPLAN_327#ABBREVIATION:argG#ECNUMBERS:6.3.4.5# proteins: NAME:argininosuccinate synthetase#ABBREVIATION:ArgG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_327)
reactant: 733337
product: 733397

733361
type: SpeciesReference
stoichiometry: 1.0
species: 539669

733385
type: SpeciesReference
stoichiometry: 1.0
species: 539647

733349
type: SpeciesReference
stoichiometry: 1.0
species: 539659

733373
type: SpeciesReference
stoichiometry: 1.0
species: 539638

733409
type: SpeciesReference
stoichiometry: 1.0
species: 540021

541730
type: LocalParameter
value: 0.0

541729
type: LocalParameter
value: 0.0

541727
type: LocalParameter
value: 999999.0

541726
type: LocalParameter
value: 0.0

733337
type: SpeciesReference
stoichiometry: 1.0
species: 539653

733397
type: SpeciesReference
stoichiometry: 1.0
species: 539783

540358
type: Reaction
product: 733735
kinetic law: 733747
reactant: 733699
notes: Abbreviation: R_ASPTA Synonyms: _29 EC Number: 2.6.1.1 SUBSYSTEM: Alanine and Aspartate Metabolism Equation: [c] : akg + asp-L <==> glu-L + oaa Confidence Level: 2 genes: LOCUS:BPLAN_285#ABBREVIATION:aspC#ECNUMBERS:2.6.1.1# proteins: NAME:aspartate aminotransferase#ABBREVIATION:AspC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_285)
fast: false
product: 733723
reversible: true
reactant: 733711
name: aspartate transaminase

733735
type: SpeciesReference
stoichiometry: 1.0
species: 539986

541760
type: LocalParameter
value: 0.0

541759
type: LocalParameter
value: 0.0

541757
type: LocalParameter
value: 999999.0

541756
type: LocalParameter
value: -999999.0

733699
type: SpeciesReference
stoichiometry: 1.0
species: 539622

733723
type: SpeciesReference
stoichiometry: 1.0
species: 539760

733711
type: SpeciesReference
stoichiometry: 1.0
species: 539653

540715
type: Reaction
kinetic law: 741009
product: 740997
reactant: 740985
reactant: 740973
notes: Abbreviation: R_FUM Synonyms: _0 EC Number: 4.2.1.2 SUBSYSTEM: Citric Acid Cycle Equation: [c] : fum + h2o <==> mal-L Confidence Level: 2 genes: LOCUS:BPLAN_105#ABBREVIATION:fumC#ECNUMBERS:4.2.1.2# proteins: NAME:fumarase C#ABBREVIATION:FumC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_105)
fast: false
reversible: true
name: fumarase

542464
type: LocalParameter
value: 0.0

542463
type: LocalParameter
value: 0.0

542461
type: LocalParameter
value: 999999.0

542460
type: LocalParameter
value: -999999.0

740997
type: SpeciesReference
stoichiometry: 1.0
species: 539941

740985
type: SpeciesReference
stoichiometry: 1.0
species: 539779

740973
type: SpeciesReference
stoichiometry: 1.0
species: 539747

540277
type: Reaction
product: 731886
name: adenylosuccinate synthase
product: 731899
notes: Abbreviation: R_ADSS Synonyms: _0 EC Number: 6.3.4.4 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : asp-L + gtp + imp --> dcamp + gdp + (2) h + pi Confidence Level: 2 genes: LOCUS:BPLAN_151#ABBREVIATION:purA#ECNUMBERS:6.3.4.4# proteins: NAME:Adenylosuccinate synthetase#ABBREVIATION:PurA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_151)
reversible: false
reactant: 731825
product: 731873
reactant: 731849
reactant: 731837
fast: false
kinetic law: 731911
product: 731861

731886
type: SpeciesReference
stoichiometry: 2.0
species: 539783

731899
type: SpeciesReference
stoichiometry: 1.0
species: 540013

731825
type: SpeciesReference
stoichiometry: 1.0
species: 539653

731873
type: SpeciesReference
stoichiometry: 1.0
species: 539754

731849
type: SpeciesReference
stoichiometry: 1.0
species: 539920

731837
type: SpeciesReference
stoichiometry: 1.0
species: 539776

541598
type: LocalParameter
value: 0.0

541597
type: LocalParameter
value: 0.0

541595
type: LocalParameter
value: 999999.0

541594
type: LocalParameter
value: 0.0

731861
type: SpeciesReference
stoichiometry: 1.0
species: 539691

539691
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N6-(1,2-Dicarboxyethyl)-AMP_C14H14N5O11P

541075
type: Reaction
reactant: 749105
kinetic law: 749141
reactant: 749093
name: O-Phospho-4-hydroxy-L-threonine:2-oxoglutarate aminotransferase
reversible: true
notes: Abbreviation: R_OHPBAT Synonyms: _0 EC Number: 2.6.1.52 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : glu-L + ohpb <==> akg + phthr Confidence Level: 2 NCD genes: LOCUS:BPLAN_212#ABBREVIATION:serC#ECNUMBERS:2.6.1.52# LOCUS:BPLAN_490#ABBREVIATION:serC#ECNUMBERS:2.6.1.52# proteins: NAME:Phosphoserine aminotransferase#ABBREVIATION:SerC# NAME:Phosphoserine aminotransferase#ABBREVIATION:SerC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_212) or (BPLAN_490)
product: 749117
fast: false
product: 749129

749105
type: SpeciesReference
stoichiometry: 1.0
species: 539989

539989
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Oxo-3-hydroxy-4-phosphobutanoate_C4H4O8P

543227
type: LocalParameter
value: 0.0

543225
type: LocalParameter
value: 0.0

543223
type: LocalParameter
value: 999999.0

543221
type: LocalParameter
value: -999999.0

749093
type: SpeciesReference
stoichiometry: 1.0
species: 539760

749117
type: SpeciesReference
stoichiometry: 1.0
species: 539622

749129
type: SpeciesReference
stoichiometry: 1.0
species: 540012

540982
type: Reaction
product: 747160
kinetic law: 747184
notes: Abbreviation: R_NDPK7 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dcdp <==> adp + dctp Confidence Level: 2 Many nucleoside diphosphates (eight described) can act as acceptors. While many ribo- and deoxyribonucleoside triphosphates can act as donors, only ATP is chosen as a donor to minimize the number of total reactions. genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)
fast: false
product: 747172
reactant: 747136
name: nucleoside-diphosphate kinase (ATP:dCDP)
reversible: true
reactant: 747148

747160
type: SpeciesReference
stoichiometry: 1.0
species: 539611

543011
type: LocalParameter
value: 0.0

543009
type: LocalParameter
value: 0.0

543007
type: LocalParameter
value: 999999.0

543005
type: LocalParameter
value: -999999.0

747172
type: SpeciesReference
stoichiometry: 1.0
species: 539695

747136
type: SpeciesReference
stoichiometry: 1.0
species: 539659

747148
type: SpeciesReference
stoichiometry: 1.0
species: 539693

541000
type: Reaction
kinetic law: 747536
product: 747524
product: 747512
reactant: 747499
notes: Abbreviation: R_NPHS Synonyms: _0 EC Number: 4.1.3.36 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : sbzcoa --> coa + dhna Confidence Level: 2 genes: LOCUS:BPLAN_369#ABBREVIATION:menB#ECNUMBERS:4.1.3.36# proteins: NAME:Napthoate synthase#ABBREVIATION:MenB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_369)
fast: false
reversible: false
name: naphthoate synthase

543052
type: LocalParameter
value: 0.0

543050
type: LocalParameter
value: 0.0

543048
type: LocalParameter
value: 999999.0

543046
type: LocalParameter
value: 0.0

747524
type: SpeciesReference
stoichiometry: 1.0
species: 539706

747512
type: SpeciesReference
stoichiometry: 1.0
species: 539677

747499
type: SpeciesReference
stoichiometry: 1.0
species: 540053

540619
type: Reaction
kinetic law: 739632
product: 739620
reactant: 739608
notes: Abbreviation: R_EX_k_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : k <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: K+ exchange

542272
type: LocalParameter
value: 0.0

542271
type: LocalParameter
value: 0.0

542269
type: LocalParameter
value: 999999.0

542268
type: LocalParameter
value: -999999.0

739620
type: SpeciesReference
stoichiometry: 1.0
species: 540156

540156
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: potassium_K

739608
type: SpeciesReference
stoichiometry: 1.0
species: 539931

539931
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: potassium_K

541279
type: Reaction
reactant: 753590
notes: Abbreviation: R_SDPTA Synonyms: _0 EC Number: 2.6.1.17 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : akg + sl26da <==> glu-L + sl2a6o Confidence Level: 2 genes: LOCUS:BPLAN_012#ABBREVIATION:dapC#ECNUMBERS:2.6.1.11,-!-,2.6.1.17# proteins: NAME:bifunctional acetylornithine transaminase/N-succinyldiaminopimelate aminotransferase#ABBREVIATION:DapC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_012)
fast: false
reactant: 753602
kinetic law: 753638
product: 753614
reversible: true
product: 753626
name: succinyldiaminopimelate transaminase

753590
type: SpeciesReference
stoichiometry: 1.0
species: 539622

753602
type: SpeciesReference
stoichiometry: 1.0
species: 540068

543703
type: LocalParameter
value: 0.0

543701
type: LocalParameter
value: 0.0

543699
type: LocalParameter
value: 999999.0

543697
type: LocalParameter
value: -999999.0

753614
type: SpeciesReference
stoichiometry: 1.0
species: 539760

753626
type: SpeciesReference
stoichiometry: 1.0
species: 540071

540071
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: N-Succinyl-2-L-amino-6-oxoheptanedioate_C11H12NO8

541165
type: Reaction
product: 751137
product: 751113
product: 751125
notes: Abbreviation: R_PPTGS_Pam Synonyms: _0 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : uaagmda --> h + peptido_Pam + udcpdp Confidence Level: 2 JLR- the production of a subunit of peptidoglycantv- H pylori also uses the same form genes: LOCUS:BPLAN_356#ABBREVIATION:mrcA#ECNUMBERS:2.4.1.129# proteins: NAME:peptidoglycan synthetase; penicillin-binding protein 1A#ABBREVIATION:MrcA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_356)
name: Peptidoglycan subunit synthesis
fast: false
kinetic law: 751149
reactant: 751101
reversible: false

751137
type: SpeciesReference
stoichiometry: 1.0
species: 540108

751113
type: SpeciesReference
stoichiometry: 1.0
species: 539783

751125
type: SpeciesReference
stoichiometry: 1.0
species: 540006

543437
type: LocalParameter
value: 0.0

543435
type: LocalParameter
value: 0.0

543433
type: LocalParameter
value: 999999.0

543431
type: LocalParameter
value: 0.0

751101
type: SpeciesReference
stoichiometry: 1.0
species: 540101

540925
type: Reaction
reversible: true
product: 745852
reactant: 745804
kinetic law: 745864
product: 745840
fast: false
notes: Abbreviation: R_MTHFD Synonyms: _0 EC Number: 1.5.1.5 SUBSYSTEM: Folate Metabolism Equation: [c] : mlthf + nadp <==> h + methf + nadph Confidence Level: 2 genes: LOCUS:BPLAN_198#ABBREVIATION:folD#ECNUMBERS:1.5.1.5,-!-,3.5.4.9# proteins: NAME:Methylene-tetrahydrofolate dehydrogenase#ABBREVIATION:FolD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_198)
product: 745828
reactant: 745816
name: methylenetetrahydrofolate dehydrogenase (NADP)

745852
type: SpeciesReference
stoichiometry: 1.0
species: 539969

745804
type: SpeciesReference
stoichiometry: 1.0
species: 539952

542888
type: LocalParameter
value: 0.0

542886
type: LocalParameter
value: 0.0

542885
type: LocalParameter
value: 999999.0

542883
type: LocalParameter
value: -999999.0

745840
type: SpeciesReference
stoichiometry: 1.0
species: 539948

745828
type: SpeciesReference
stoichiometry: 1.0
species: 539783

745816
type: SpeciesReference
stoichiometry: 1.0
species: 539967

540106
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476

541354
type: Reaction
reactant: 755269
product: 755319
reversible: false
reactant: 755281
product: 755306
notes: Abbreviation: R_TMDPK Synonyms: _0 EC Number: 2.7.6.2 SUBSYSTEM: Thiamine Metabolism Equation: [c] : atp + thm --> amp + h + thmpp Confidence Level: 2 genes: LOCUS:BPLAN_007#ABBREVIATION:thiN#ECNUMBERS:2.7.6.2# proteins: NAME:thiamin pyrophosphokinase 1#ABBREVIATION:ThiN# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_007)
product: 755294
fast: false
kinetic law: 755331
name: thiamine diphosphokinase

755269
type: SpeciesReference
stoichiometry: 1.0
species: 539659

755319
type: SpeciesReference
stoichiometry: 1.0
species: 540086

755281
type: SpeciesReference
stoichiometry: 1.0
species: 540084

755306
type: SpeciesReference
stoichiometry: 1.0
species: 539783

755294
type: SpeciesReference
stoichiometry: 1.0
species: 539638

543878
type: LocalParameter
value: 0.0

543876
type: LocalParameter
value: 0.0

543874
type: LocalParameter
value: 999999.0

543872
type: LocalParameter
value: 0.0

540910
type: Reaction
reactant: 745453
notes: Abbreviation: R_METabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + h2o[c] + met-L[e] --> adp[c] + h[c] + met-L[c] + pi[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 745441
product: 745513
product: 745477
reversible: false
name: L-methionine transport via ABC system
fast: false
kinetic law: 745525
product: 745489
product: 745501
reactant: 745465

745453
type: SpeciesReference
stoichiometry: 1.0
species: 539779

745441
type: SpeciesReference
stoichiometry: 1.0
species: 539659

745513
type: SpeciesReference
stoichiometry: 1.0
species: 540013

745477
type: SpeciesReference
stoichiometry: 1.0
species: 539611

542858
type: LocalParameter
value: 0.0

542856
type: LocalParameter
value: 0.0

542855
type: LocalParameter
value: 999999.0

542853
type: LocalParameter
value: 0.0

745489
type: SpeciesReference
stoichiometry: 1.0
species: 539783

745501
type: SpeciesReference
stoichiometry: 1.0
species: 539945

745465
type: SpeciesReference
stoichiometry: 1.0
species: 539947

540088
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Threonine_C4H9NO3

541153
type: Reaction
reactant: 750799
name: phosphoenolpyruvate carboxykinase
notes: Abbreviation: R_PPCK Synonyms: _0 EC Number: 4.1.1.49 SUBSYSTEM: Anaplerotic reactions Equation: [c] : atp + oaa --> adp + co2 + pep Confidence Level: 2 genes: LOCUS:BPLAN_557#ABBREVIATION:pck#ECNUMBERS:4.1.1.49# proteins: NAME:phosphoenolpyruvate carboxykinase#ABBREVIATION:Pck# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_557)
fast: false
product: 750823
kinetic law: 750847
product: 750835
product: 750811
reversible: false
reactant: 750786

750799
type: SpeciesReference
stoichiometry: 1.0
species: 539986

750823
type: SpeciesReference
stoichiometry: 1.0
species: 539673

543409
type: LocalParameter
value: 0.0

543407
type: LocalParameter
value: 0.0

543405
type: LocalParameter
value: 999999.0

543403
type: LocalParameter
value: 0.0

750835
type: SpeciesReference
stoichiometry: 1.0
species: 540005

750811
type: SpeciesReference
stoichiometry: 1.0
species: 539611

750786
type: SpeciesReference
stoichiometry: 1.0
species: 539659

540520
type: Reaction
product: 738135
reactant: 738123
kinetic law: 738171
reversible: false
product: 738147
fast: false
name: dephospho-CoA kinase
notes: Abbreviation: R_DPCOAK Synonyms: _0 EC Number: 2.7.1.24 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + dpcoa --> adp + coa + h Confidence Level: 2 genes: LOCUS:BPLAN_440#ABBREVIATION:coaE#ECNUMBERS:2.7.1.24# proteins: NAME:dephospho-CoA kinase#ABBREVIATION:CoaE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_440)
reactant: 738111
product: 738159

738135
type: SpeciesReference
stoichiometry: 1.0
species: 539611

738123
type: SpeciesReference
stoichiometry: 1.0
species: 539717

542074
type: LocalParameter
value: 0.0

542073
type: LocalParameter
value: 0.0

542071
type: LocalParameter
value: 999999.0

542070
type: LocalParameter
value: 0.0

738147
type: SpeciesReference
stoichiometry: 1.0
species: 539677

738111
type: SpeciesReference
stoichiometry: 1.0
species: 539659

738159
type: SpeciesReference
stoichiometry: 1.0
species: 539783

540685
type: Reaction
kinetic law: 740429
product: 740417
reactant: 740405
notes: Abbreviation: R_EX_val_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : val-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Valine exchange

542404
type: LocalParameter
value: 0.0

542403
type: LocalParameter
value: 0.0

542401
type: LocalParameter
value: 999999.0

542400
type: LocalParameter
value: 0.0

740417
type: SpeciesReference
stoichiometry: 1.0
species: 540213

540213
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Valine_C5H11NO2

740405
type: SpeciesReference
stoichiometry: 1.0
species: 540123

540123
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Valine_C5H11NO2

541405
type: Reaction
reactant: 756405
reactant: 756393
product: 756453
product: 756429
kinetic law: 756465
reversible: false
product: 756417
reactant: 756381
fast: false
notes: Abbreviation: R_UAMAGS Synonyms: _0 EC Number: 6.3.2.9 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : atp + glu-D + uama --> adp + h + pi + uamag Confidence Level: 2 genes: LOCUS:BPLAN_254#ABBREVIATION:murD#ECNUMBERS:6.3.2.9# proteins: NAME:UDP-N-acetylmuramoylalanine-D-glutamate ligase#ABBREVIATION:MurD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_254)
name: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
product: 756441

756405
type: SpeciesReference
stoichiometry: 1.0
species: 540105

756393
type: SpeciesReference
stoichiometry: 1.0
species: 539759

756453
type: SpeciesReference
stoichiometry: 1.0
species: 540106

756429
type: SpeciesReference
stoichiometry: 1.0
species: 539783

543997
type: LocalParameter
value: 0.0

543995
type: LocalParameter
value: 0.0

543993
type: LocalParameter
value: 999999.0

543991
type: LocalParameter
value: 0.0

756417
type: SpeciesReference
stoichiometry: 1.0
species: 539611

756381
type: SpeciesReference
stoichiometry: 1.0
species: 539659

756441
type: SpeciesReference
stoichiometry: 1.0
species: 540013

540382
type: Reaction
product: 734969
reactant: 734896
kinetic law: 735005
reactant: 734920
product: 734945
product: 734981
reversible: false
product: 734957
product: 734993
reactant: 734932
reactant: 734908
fast: false
name: Fatty acid biosynthesis (n-C16:0)
notes: Abbreviation: R_C160SN Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : actACP + (20) h + (6) malACP + (14) nadph --> (6) ACP + (6) co2 + (7) h2o + (14) nadp + palmACP Confidence Level: 2 tv genes: LOCUS:BPLAN_596#ABBREVIATION:fabZ#ECNUMBERS:4.2.1.-# LOCUS:BPLAN_294#ABBREVIATION:fabI#ECNUMBERS:1.3.1.9# LOCUS:BPLAN_576#ABBREVIATION:fabG#ECNUMBERS:1.1.1.100# LOCUS:BPLAN_555#ABBREVIATION:fabF#ECNUMBERS:2.3.1.179# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase II#ABBREVIATION:FabF# NAME:_3-oxoacyl-ACP reductase#ABBREVIATION:FabG# NAME:Enoyl-(acyl-carrier-protein) reductase (NADH)#ABBREVIATION:FabI# NAME:(3R)-hydroxymyriostoyl-(acyl carrier protein) dehydratase#ABBREVIATION:FabZ# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_596) and (BPLAN_555) and (BPLAN_294) and (BPLAN_576)

734969
type: SpeciesReference
stoichiometry: 7.0
species: 539779

734896
type: SpeciesReference
stoichiometry: 1.0
species: 539605

541808
type: LocalParameter
value: 0.0

541807
type: LocalParameter
value: 0.0

541805
type: LocalParameter
value: 999999.0

541804
type: LocalParameter
value: 0.0

734920
type: SpeciesReference
stoichiometry: 6.0
species: 539939

734945
type: SpeciesReference
stoichiometry: 6.0
species: 539601

734981
type: SpeciesReference
stoichiometry: 14.0
species: 539967

734957
type: SpeciesReference
stoichiometry: 6.0
species: 539673

734993
type: SpeciesReference
stoichiometry: 1.0
species: 540000

734932
type: SpeciesReference
stoichiometry: 14.0
species: 539969

734908
type: SpeciesReference
stoichiometry: 20.0
species: 539783

540991
type: Reaction
kinetic law: 747341
product: 747329
reactant: 747317
notes: Abbreviation: R_NH4t Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: nh4[e] <==> nh4[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: ammonia reversible transport

543032
type: LocalParameter
value: 0.0

543030
type: LocalParameter
value: 0.0

543028
type: LocalParameter
value: 999999.0

543026
type: LocalParameter
value: -999999.0

747329
type: SpeciesReference
stoichiometry: 1.0
species: 539970

747317
type: SpeciesReference
stoichiometry: 1.0
species: 539972

540874
type: Reaction
notes: Abbreviation: R_KAS14 Synonyms: _0 EC Number: 2.3.1.41 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : acACP + h + malACP --> ACP + actACP + co2 Confidence Level: 2 tvAMF genes: LOCUS:BPLAN_555#ABBREVIATION:fabF#ECNUMBERS:2.3.1.179# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase II#ABBREVIATION:FabF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_555)
product: 744545
name: beta-ketoacyl-ACP synthase
kinetic law: 744582
fast: false
reactant: 744509
reactant: 744521
reversible: false
reactant: 744533
product: 744570
product: 744558

744545
type: SpeciesReference
stoichiometry: 1.0
species: 539601

542786
type: LocalParameter
value: 0.0

542784
type: LocalParameter
value: 0.0

542783
type: LocalParameter
value: 999999.0

542781
type: LocalParameter
value: 0.0

744509
type: SpeciesReference
stoichiometry: 1.0
species: 539588

744521
type: SpeciesReference
stoichiometry: 1.0
species: 539783

744533
type: SpeciesReference
stoichiometry: 1.0
species: 539939

744570
type: SpeciesReference
stoichiometry: 1.0
species: 539673

744558
type: SpeciesReference
stoichiometry: 1.0
species: 539605

540204
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Tryptophan_C11H12N2O2

540535
type: Reaction
name: dUTP diphosphatase
reversible: false
fast: false
product: 738508
product: 738496
kinetic law: 738520
product: 738484
reactant: 738472
notes: Abbreviation: R_DUTPDP Synonyms: _0 EC Number: 3.6.1.23 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dutp + h2o --> dump + h + ppi Confidence Level: 2 genes: LOCUS:BPLAN_035#ABBREVIATION:dut#ECNUMBERS:3.6.1.23# LOCUS:BPLAN_p001#ABBREVIATION:dut#ECNUMBERS:3.6.1.23# proteins: NAME:deoxyuridine 5'-triphosphate nucleotidohydrolase#ABBREVIATION:Dut# NAME:dUTP pyrophosphatase#ABBREVIATION:Dut# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_035) or (BPLAN_p001)
reactant: 738460

738508
type: SpeciesReference
stoichiometry: 1.0
species: 540021

738496
type: SpeciesReference
stoichiometry: 1.0
species: 539783

542104
type: LocalParameter
value: 0.0

542103
type: LocalParameter
value: 0.0

542101
type: LocalParameter
value: 999999.0

542100
type: LocalParameter
value: 0.0

738484
type: SpeciesReference
stoichiometry: 1.0
species: 539722

738472
type: SpeciesReference
stoichiometry: 1.0
species: 539779

738460
type: SpeciesReference
stoichiometry: 1.0
species: 539725

540418
type: Reaction
product: 735952
notes: Abbreviation: R_CYSS Synonyms: _8 SUBSYSTEM: Cysteine Metabolism Equation: [c] : acser + h2s --> ac + cys-L + h Confidence Level: 2 EC changed to 2.5.1.47 from 4.2.99.8 genes: LOCUS:BPLAN_361#ABBREVIATION:cysK#ECNUMBERS:2.5.1.47# proteins: NAME:Cysteine synthase A#ABBREVIATION:CysK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_361)
fast: false
reactant: 735903
reactant: 735915
product: 735928
product: 735940
kinetic law: 735964
name: cysteine synthase
reversible: false

735952
type: SpeciesReference
stoichiometry: 1.0
species: 539783

735903
type: SpeciesReference
stoichiometry: 1.0
species: 539603

735915
type: SpeciesReference
stoichiometry: 1.0
species: 539781

539781
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Hydrogen sulfide_H2S

735928
type: SpeciesReference
stoichiometry: 1.0
species: 539584

735940
type: SpeciesReference
stoichiometry: 1.0
species: 539682

541880
type: LocalParameter
value: 0.0

541879
type: LocalParameter
value: 0.0

541877
type: LocalParameter
value: 999999.0

541876
type: LocalParameter
value: 0.0

540322
type: Reaction
reactant: 732853
kinetic law: 732901
fast: false
name: anthranilate phosphoribosyltransferase
reactant: 732865
product: 732877
product: 732889
reversible: false
notes: Abbreviation: R_ANPRT Synonyms: _0 EC Number: 2.4.2.18 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : anth + prpp --> ppi + pran Confidence Level: 2 genes: LOCUS:BPLAN_218#ABBREVIATION:trpD#ECNUMBERS:4.1.3.27,-!-,2.4.2.18# proteins: NAME:anthranilate synthase II#ABBREVIATION:TrpD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_218)

732853
type: SpeciesReference
stoichiometry: 1.0
species: 539639

541688
type: LocalParameter
value: 0.0

541687
type: LocalParameter
value: 0.0

541685
type: LocalParameter
value: 999999.0

541684
type: LocalParameter
value: 0.0

732865
type: SpeciesReference
stoichiometry: 1.0
species: 540031

732877
type: SpeciesReference
stoichiometry: 1.0
species: 540021

732889
type: SpeciesReference
stoichiometry: 1.0
species: 540023

540403
type: Reaction
reactant: 735514
fast: false
product: 735551
reactant: 735527
reversible: false
notes: Abbreviation: R_CMPN Synonyms: _0 EC Number: 3.2.2.10 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : cmp + h2o --> csn + r5p Confidence Level: 1 JLR - also acts on dUMP, dCMP,dTMP, and presumably TMP and UMP genes: none proteins: none citations: none GENE ASSOCIATION:
product: 735539
kinetic law: 735563
name: CMP nucleosidase

735514
type: SpeciesReference
stoichiometry: 1.0
species: 539671

735551
type: SpeciesReference
stoichiometry: 1.0
species: 540041

735527
type: SpeciesReference
stoichiometry: 1.0
species: 539779

735539
type: SpeciesReference
stoichiometry: 1.0
species: 539679

541850
type: LocalParameter
value: 0.0

541849
type: LocalParameter
value: 0.0

541847
type: LocalParameter
value: 999999.0

541846
type: LocalParameter
value: 0.0

541207
type: Reaction
fast: false
reactant: 752082
reactant: 752069
kinetic law: 752118
product: 752106
product: 752094
reversible: false
notes: Abbreviation: R_PSP_L Synonyms: _0 EC Number: 3.1.3.3 SUBSYSTEM: Glycine and Serine Metabolism Equation: [c] : h2o + pser-L --> pi + ser-L Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
name: phosphoserine phosphatase (L-serine)

752082
type: SpeciesReference
stoichiometry: 1.0
species: 540033

752069
type: SpeciesReference
stoichiometry: 1.0
species: 539779

543535
type: LocalParameter
value: 0.0

543533
type: LocalParameter
value: 0.0

543531
type: LocalParameter
value: 999999.0

543529
type: LocalParameter
value: 0.0

752106
type: SpeciesReference
stoichiometry: 1.0
species: 540056

752094
type: SpeciesReference
stoichiometry: 1.0
species: 540013

541099
type: Reaction
reactant: 749671
kinetic law: 749719
reactant: 749659
notes: Abbreviation: R_PDH Synonyms: _0 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : coa + nad + pyr --> accoa + co2 + nadh Confidence Level: 2 genes: LOCUS:BPLAN_536#ABBREVIATION:pdhA#ECNUMBERS:1.2.4.1# LOCUS:BPLAN_537#ABBREVIATION:aceF#ECNUMBERS:2.3.1.12# LOCUS:BPLAN_486#ABBREVIATION:lpd#ECNUMBERS:1.8.1.4# LOCUS:BPLAN_194#ABBREVIATION:pdhB#ECNUMBERS:1.2.4.1# proteins: NAME:pyruvate dehydrogenase E1 component subunit beta#ABBREVIATION:PdhB# NAME:dihydrolipoamide dehydrogenase#ABBREVIATION:LpdA# NAME:Pyruvate dehydrogenase, F#ABBREVIATION:AceF# NAME:pyruvate dehydrogenase E1 component subunit alpha#ABBREVIATION:PdhA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_536) and (BPLAN_537) and (BPLAN_486) and (BPLAN_194)
fast: false
product: 749695
product: 749707
product: 749683
reactant: 749646
reversible: false
name: pyruvate dehydrogenase

749671
type: SpeciesReference
stoichiometry: 1.0
species: 540038

543283
type: LocalParameter
value: 0.0

543281
type: LocalParameter
value: 0.0

543279
type: LocalParameter
value: 999999.0

543277
type: LocalParameter
value: 0.0

749659
type: SpeciesReference
stoichiometry: 1.0
species: 539964

749695
type: SpeciesReference
stoichiometry: 1.0
species: 539673

749707
type: SpeciesReference
stoichiometry: 1.0
species: 539966

749683
type: SpeciesReference
stoichiometry: 1.0
species: 539590

749646
type: SpeciesReference
stoichiometry: 1.0
species: 539677

539929
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: potassium_K

541288
type: Reaction
name: L-serine via sodium symport
notes: Abbreviation: R_SERt4 Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: na1[e] + ser-L[e] --> na1[c] + ser-L[c] Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
reversible: false
reactant: 753796
product: 753808
reactant: 753784
fast: false
product: 753821
kinetic law: 753833

753796
type: SpeciesReference
stoichiometry: 1.0
species: 540059

753808
type: SpeciesReference
stoichiometry: 1.0
species: 539958

753784
type: SpeciesReference
stoichiometry: 1.0
species: 539959

753821
type: SpeciesReference
stoichiometry: 1.0
species: 540056

543724
type: LocalParameter
value: 0.0

543722
type: LocalParameter
value: 0.0

543720
type: LocalParameter
value: 999999.0

543718
type: LocalParameter
value: 0.0

540784
type: Reaction
product: 742562
kinetic law: 742587
name: GTP cyclohydrolase I
reactant: 742550
reactant: 742538
notes: Abbreviation: R_GTPCI Synonyms: _0 EC Number: 3.5.4.16 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : gtp + h2o --> ahdt + for Confidence Level: 2 The reaction involves hydrolysis of two C-N bonds and isomerization of the pentose unit; the recyclization may be non-enzymic genes: LOCUS:BPLAN_070#ABBREVIATION:folE#ECNUMBERS:3.5.4.16# proteins: NAME:GTP cyclohydrolase I#ABBREVIATION:FolE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_070)
fast: false
product: 742575
reversible: false

742562
type: SpeciesReference
stoichiometry: 1.0
species: 539616

542602
type: LocalParameter
value: 0.0

542600
type: LocalParameter
value: 0.0

542599
type: LocalParameter
value: 999999.0

542597
type: LocalParameter
value: 0.0

742550
type: SpeciesReference
stoichiometry: 1.0
species: 539779

742538
type: SpeciesReference
stoichiometry: 1.0
species: 539776

742575
type: SpeciesReference
stoichiometry: 1.0
species: 539739

539739
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Formate_CH1O2

541369
type: Reaction
name: triokinase
product: 755626
reactant: 755574
reversible: false
kinetic law: 755639
fast: false
product: 755613
reactant: 755587
notes: Abbreviation: R_TRIOK Synonyms: _0 EC Number: 2.7.1.28 SUBSYSTEM: Fructose and Mannose Metabolism Equation: [c] : atp + glyald --> adp + g3p + h Confidence Level: 2 genes: LOCUS:BPLAN_181#ABBREVIATION:glpK#ECNUMBERS:2.7.1.28,-!-,2.7.1.30# proteins: NAME:glycerol kinase#ABBREVIATION:GlpK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_181)
product: 755600

755626
type: SpeciesReference
stoichiometry: 1.0
species: 539783

755574
type: SpeciesReference
stoichiometry: 1.0
species: 539659

543913
type: LocalParameter
value: 0.0

543911
type: LocalParameter
value: 0.0

543909
type: LocalParameter
value: 999999.0

543907
type: LocalParameter
value: 0.0

755613
type: SpeciesReference
stoichiometry: 1.0
species: 539749

755587
type: SpeciesReference
stoichiometry: 1.0
species: 539764

755600
type: SpeciesReference
stoichiometry: 1.0
species: 539611

540613
type: Reaction
kinetic law: 739559
product: 739547
reactant: 739535
notes: Abbreviation: R_EX_his_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : his-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Histidine exchange

542260
type: LocalParameter
value: 0.0

542259
type: LocalParameter
value: 0.0

542257
type: LocalParameter
value: 999999.0

542256
type: LocalParameter
value: 0.0

739547
type: SpeciesReference
stoichiometry: 1.0
species: 540154

540154
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Histidine_C6H9N3O2

739535
type: SpeciesReference
stoichiometry: 1.0
species: 539791

540247
type: Reaction
reversible: false
notes: Abbreviation: R_ADA Synonyms: _0 EC Number: 3.5.4.4 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : adn + h + h2o --> ins + nh4 Confidence Level: 1 Added EC- JLR genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 731283
reactant: 731235
reactant: 731247
product: 731259
name: Adenosine deaminase
product: 731271
reactant: 731223
fast: false

541540
type: LocalParameter
value: 0.0

541538
type: LocalParameter
value: 0.0

541537
type: LocalParameter
value: 999999.0

541535
type: LocalParameter
value: 0.0

731235
type: SpeciesReference
stoichiometry: 1.0
species: 539783

731247
type: SpeciesReference
stoichiometry: 1.0
species: 539779

731259
type: SpeciesReference
stoichiometry: 1.0
species: 539924

731271
type: SpeciesReference
stoichiometry: 1.0
species: 539970

731223
type: SpeciesReference
stoichiometry: 1.0
species: 539609

540799
type: Reaction
reversible: true
product: 742866
reactant: 742829
product: 742854
kinetic law: 742879
name: HCO3 equilibration reaction
reactant: 742842
notes: Abbreviation: R_HCO3E Synonyms: _7 EC Number: 4.2.1.1 SUBSYSTEM: Unassigned Equation: [c] : co2 + h2o <==> h + hco3 Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false

742866
type: SpeciesReference
stoichiometry: 1.0
species: 539785

742829
type: SpeciesReference
stoichiometry: 1.0
species: 539673

742854
type: SpeciesReference
stoichiometry: 1.0
species: 539783

542632
type: LocalParameter
value: 0.0

542630
type: LocalParameter
value: 0.0

542629
type: LocalParameter
value: 999999.0

542627
type: LocalParameter
value: -999999.0

742842
type: SpeciesReference
stoichiometry: 1.0
species: 539779

540670
type: Reaction
kinetic law: 740249
product: 740237
reactant: 740225
notes: Abbreviation: R_EX_thm_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : thm <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Thiamin exchange

542374
type: LocalParameter
value: 0.0

542373
type: LocalParameter
value: 0.0

542371
type: LocalParameter
value: 999999.0

542370
type: LocalParameter
value: -999999.0

740237
type: SpeciesReference
stoichiometry: 1.0
species: 540198

740225
type: SpeciesReference
stoichiometry: 1.0
species: 540085

540085
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Thiamin_C12H17N4OS

540628
type: Reaction
kinetic law: 739740
product: 739728
reactant: 739716
notes: Abbreviation: R_EX_mal_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : mal-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Malate exchange

542290
type: LocalParameter
value: 0.0

542289
type: LocalParameter
value: 0.0

542287
type: LocalParameter
value: 999999.0

542286
type: LocalParameter
value: 0.0

739728
type: SpeciesReference
stoichiometry: 1.0
species: 540160

540160
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Malate_C4H4O5

739716
type: SpeciesReference
stoichiometry: 1.0
species: 539942

539724
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Deoxyuridine_C9H12N2O5

540138
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: (S)-Dihydroorotate_C5H5N2O4

541108
type: Reaction
reactant: 749913
notes: Abbreviation: R_PERD Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 4per + nad <==> h + nadh + ohpb Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
product: 749961
fast: false
product: 749937
product: 749949
name: Erythronate 4-phosphate (4per) dehydrogenase
reactant: 749925
reversible: true
kinetic law: 749973

749913
type: SpeciesReference
stoichiometry: 1.0
species: 539554

749961
type: SpeciesReference
stoichiometry: 1.0
species: 539989

749937
type: SpeciesReference
stoichiometry: 1.0
species: 539783

749949
type: SpeciesReference
stoichiometry: 1.0
species: 539966

749925
type: SpeciesReference
stoichiometry: 1.0
species: 539964

543304
type: LocalParameter
value: 0.0

543302
type: LocalParameter
value: 0.0

543300
type: LocalParameter
value: 999999.0

543298
type: LocalParameter
value: -999999.0

541414
type: Reaction
product: 756696
name: undecaprenyl-diphosphatase
reactant: 756658
reversible: false
kinetic law: 756708
reactant: 756645
fast: false
notes: Abbreviation: R_UDCPDP Synonyms: _0 EC Number: 3.6.1.27 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : h2o + udcpdp --> h + pi + udcpp Confidence Level: 2 genes: LOCUS:BPLAN_278#ABBREVIATION:uppP#ECNUMBERS:3.6.1.27# proteins: NAME:undecaprenyl-diphosphatase#ABBREVIATION:UppP# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_278)
product: 756683
product: 756670

756696
type: SpeciesReference
stoichiometry: 1.0
species: 540109

756658
type: SpeciesReference
stoichiometry: 1.0
species: 540108

544018
type: LocalParameter
value: 0.0

544016
type: LocalParameter
value: 0.0

544014
type: LocalParameter
value: 999999.0

544012
type: LocalParameter
value: 0.0

756645
type: SpeciesReference
stoichiometry: 1.0
species: 539779

756683
type: SpeciesReference
stoichiometry: 1.0
species: 540013

756670
type: SpeciesReference
stoichiometry: 1.0
species: 539783

539548
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _4-Hydroxy-L-threonine_C4H9NO4

541027
type: Reaction
product: 748065
notes: Abbreviation: R_NTD7 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : amp + h2o --> adn + pi Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 748077
name: _5'-nucleotidase (AMP)
reversible: false
fast: false
product: 748053
reactant: 748041
reactant: 748029

748065
type: SpeciesReference
stoichiometry: 1.0
species: 540013

543115
type: LocalParameter
value: 0.0

543113
type: LocalParameter
value: 0.0

543111
type: LocalParameter
value: 999999.0

543109
type: LocalParameter
value: 0.0

748053
type: SpeciesReference
stoichiometry: 1.0
species: 539609

748041
type: SpeciesReference
stoichiometry: 1.0
species: 539779

748029
type: SpeciesReference
stoichiometry: 1.0
species: 539638

540802
type: Reaction
product: 742965
product: 742941
fast: false
reactant: 742891
kinetic law: 742977
reactant: 742903
notes: Abbreviation: R_HISabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + h2o[c] + his-L[e] --> adp[c] + h[c] + his-L[c] + pi[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
reversible: false
name: L-histidine transport via ABC system
reactant: 742916
product: 742953
product: 742928

742965
type: SpeciesReference
stoichiometry: 1.0
species: 540013

742941
type: SpeciesReference
stoichiometry: 1.0
species: 539783

742891
type: SpeciesReference
stoichiometry: 1.0
species: 539659

542638
type: LocalParameter
value: 0.0

542636
type: LocalParameter
value: 0.0

542635
type: LocalParameter
value: 999999.0

542633
type: LocalParameter
value: 0.0

742903
type: SpeciesReference
stoichiometry: 1.0
species: 539779

742916
type: SpeciesReference
stoichiometry: 1.0
species: 539791

742953
type: SpeciesReference
stoichiometry: 1.0
species: 539790

742928
type: SpeciesReference
stoichiometry: 1.0
species: 539611

539707
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Dihydroneopterin_C9H13N5O4

540592
type: Reaction
kinetic law: 739305
product: 739293
reactant: 739281
notes: Abbreviation: R_EX_gly_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : gly <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Glycine exchange

542218
type: LocalParameter
value: 0.0

542217
type: LocalParameter
value: 0.0

542215
type: LocalParameter
value: 999999.0

542214
type: LocalParameter
value: -999999.0

739293
type: SpeciesReference
stoichiometry: 1.0
species: 540146

540146
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Glycine_C2H5NO2

739281
type: SpeciesReference
stoichiometry: 1.0
species: 539763

539763
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Glycine_C2H5NO2

539740
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Formate_CH1O2

540337
type: Reaction
reactant: 733227
notes: Abbreviation: R_ARGN Synonyms: _0 EC Number: 3.5.3.1 SUBSYSTEM: Urea cycle/amino group metabolism Equation: [c] : arg-L + h2o --> orn + urea Confidence Level: 2 genes: LOCUS:BPLAN_574#ABBREVIATION:speB#ECNUMBERS:3.5.3.11# proteins: NAME:agmatinase#ABBREVIATION:SpeB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_574)
product: 733252
reactant: 733240
product: 733264
name: arginase
kinetic law: 733276
fast: false
reversible: false

733227
type: SpeciesReference
stoichiometry: 1.0
species: 539643

733252
type: SpeciesReference
stoichiometry: 1.0
species: 539990

733240
type: SpeciesReference
stoichiometry: 1.0
species: 539779

733264
type: SpeciesReference
stoichiometry: 1.0
species: 540117

541718
type: LocalParameter
value: 0.0

541717
type: LocalParameter
value: 0.0

541715
type: LocalParameter
value: 999999.0

541714
type: LocalParameter
value: 0.0

541012
type: Reaction
reactant: 747728
reactant: 747740
name: _5'-nucleotidase (UMP)
product: 747764
fast: false
kinetic law: 747776
reversible: false
notes: Abbreviation: R_NTD2 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : h2o + ump --> pi + uri Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 747752

747728
type: SpeciesReference
stoichiometry: 1.0
species: 539779

747740
type: SpeciesReference
stoichiometry: 1.0
species: 540114

747764
type: SpeciesReference
stoichiometry: 1.0
species: 540119

543080
type: LocalParameter
value: 0.0

543078
type: LocalParameter
value: 0.0

543076
type: LocalParameter
value: 999999.0

543074
type: LocalParameter
value: 0.0

747752
type: SpeciesReference
stoichiometry: 1.0
species: 540013

540994
type: Reaction
product: 747402
fast: false
kinetic law: 747414
reversible: false
product: 747390
reactant: 747366
name: nicotinamide-nucleotide adenylyltransferase
notes: Abbreviation: R_NMNAT Synonyms: _0 EC Number: 2.7.7.1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + h + nmn --> nad + ppi Confidence Level: 2 genes: LOCUS:BPLAN_313#ABBREVIATION:nadD#ECNUMBERS:2.7.7.18# proteins: NAME:Nicotinic acid mononucleotide adenyltransferase#ABBREVIATION:NadD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_313)
reactant: 747354
reactant: 747378

747402
type: SpeciesReference
stoichiometry: 1.0
species: 540021

543038
type: LocalParameter
value: 0.0

543036
type: LocalParameter
value: 0.0

543035
type: LocalParameter
value: 999999.0

543033
type: LocalParameter
value: 0.0

747390
type: SpeciesReference
stoichiometry: 1.0
species: 539964

747366
type: SpeciesReference
stoichiometry: 1.0
species: 539783

747354
type: SpeciesReference
stoichiometry: 1.0
species: 539659

747378
type: SpeciesReference
stoichiometry: 1.0
species: 539974

540877
type: Reaction
fast: false
reactant: 744606
product: 744630
notes: Abbreviation: R_KAS15 Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : accoa + h + malACP --> actACP + co2 + coa Confidence Level: 2 tvAMF genes: LOCUS:BPLAN_524#ABBREVIATION:fabH#ECNUMBERS:2.3.1.41# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase#ABBREVIATION:FabH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_524)
kinetic law: 744667
reversible: false
name: beta-ketoacyl-ACP synthase (2)
product: 744655
reactant: 744594
product: 744642
reactant: 744618

744606
type: SpeciesReference
stoichiometry: 1.0
species: 539783

744630
type: SpeciesReference
stoichiometry: 1.0
species: 539605

542792
type: LocalParameter
value: 0.0

542790
type: LocalParameter
value: 0.0

542789
type: LocalParameter
value: 999999.0

542787
type: LocalParameter
value: 0.0

744655
type: SpeciesReference
stoichiometry: 1.0
species: 539677

744594
type: SpeciesReference
stoichiometry: 1.0
species: 539590

744642
type: SpeciesReference
stoichiometry: 1.0
species: 539673

744618
type: SpeciesReference
stoichiometry: 1.0
species: 539939

541201
type: Reaction
reactant: 751947
reversible: false
reactant: 751959
product: 751983
product: 751971
notes: Abbreviation: R_PSD_Pam Synonyms: _0 EC Number: 4.1.1.65 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : h + (0.02) ps_Pam --> co2 + (0.02) pe_Pam Confidence Level: 2 JLR genes: LOCUS:BPLAN_411#ABBREVIATION:psd#ECNUMBERS:4.1.1.65# proteins: NAME:Phosphatidylserine decarboxylase#ABBREVIATION:Psd# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_411)
name: Phosphatidylserine decarboxylase
kinetic law: 751995
fast: false

751947
type: SpeciesReference
stoichiometry: 1.0
species: 539783

751959
type: SpeciesReference
stoichiometry: 0.02
species: 540032

751983
type: SpeciesReference
stoichiometry: 0.02
species: 540004

751971
type: SpeciesReference
stoichiometry: 1.0
species: 539673

543521
type: LocalParameter
value: 0.0

543519
type: LocalParameter
value: 0.0

543517
type: LocalParameter
value: 999999.0

543515
type: LocalParameter
value: 0.0

540256
type: Reaction
name: _4-amino-4-deoxychorismate synthase
reversible: false
fast: false
notes: Abbreviation: R_ADCS Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : chor + gln-L --> 4adcho + glu-L Confidence Level: 2 Not in IUBMB. No EC genes: LOCUS:BPLAN_220#ABBREVIATION:trpE#ECNUMBERS:6.3.5.8# LOCUS:BPLAN_219#ABBREVIATION:trpG#ECNUMBERS:6.3.5.8# proteins: NAME:p-aminobenzoate synthetase, component II#ABBREVIATION:TrpG# NAME:p-aminobenzoate synthetase, component I#ABBREVIATION:TrpE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_220) and (BPLAN_219)
reactant: 731439
product: 731463
product: 731451
kinetic law: 731475
reactant: 731427

731439
type: SpeciesReference
stoichiometry: 1.0
species: 539756

731463
type: SpeciesReference
stoichiometry: 1.0
species: 539760

731451
type: SpeciesReference
stoichiometry: 1.0
species: 539546

541558
type: LocalParameter
value: 0.0

541556
type: LocalParameter
value: 0.0

541555
type: LocalParameter
value: 999999.0

541553
type: LocalParameter
value: 0.0

731427
type: SpeciesReference
stoichiometry: 1.0
species: 539667

540460
type: Reaction
reactant: 736844
reactant: 736832
product: 736880
reversible: false
fast: false
name: deoxycytidine deaminase
product: 736868
reactant: 736856
kinetic law: 736893
notes: Abbreviation: R_DCYTD Synonyms: _0 EC Number: 3.5.4.14 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dcyt + h + h2o --> duri + nh4 Confidence Level: 2 genes: LOCUS:BPLAN_144#ABBREVIATION:cdd#ECNUMBERS:3.5.4.5# proteins: NAME:cytidine/deoxycytidine deaminase#ABBREVIATION:Cdd# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_144)

736844
type: SpeciesReference
stoichiometry: 1.0
species: 539783

736832
type: SpeciesReference
stoichiometry: 1.0
species: 539696

736880
type: SpeciesReference
stoichiometry: 1.0
species: 539970

736868
type: SpeciesReference
stoichiometry: 1.0
species: 539724

736856
type: SpeciesReference
stoichiometry: 1.0
species: 539779

541959
type: LocalParameter
value: 0.0

541958
type: LocalParameter
value: 0.0

541956
type: LocalParameter
value: 999999.0

541955
type: LocalParameter
value: 0.0

540538
type: Reaction
reactant: 738544
reactant: 738556
kinetic law: 738592
name: _1-deoxy-D-xylulose 5-phosphate synthase
product: 738580
fast: false
product: 738568
reversible: false
reactant: 738532
notes: Abbreviation: R_DXPS Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : g3p + h + pyr --> co2 + dxyl5p Confidence Level: 1 EC 4.1.3.37 transferred to:EC 2.2.1.7NJ genes: none proteins: none citations: none GENE ASSOCIATION:

738544
type: SpeciesReference
stoichiometry: 1.0
species: 539783

738556
type: SpeciesReference
stoichiometry: 1.0
species: 540038

542110
type: LocalParameter
value: 0.0

542109
type: LocalParameter
value: 0.0

542107
type: LocalParameter
value: 999999.0

542106
type: LocalParameter
value: 0.0

738580
type: SpeciesReference
stoichiometry: 1.0
species: 539726

738568
type: SpeciesReference
stoichiometry: 1.0
species: 539673

738532
type: SpeciesReference
stoichiometry: 1.0
species: 539749

541216
type: Reaction
notes: Abbreviation: R_PUNP1 Synonyms: _0 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : adn + pi <==> ade + r1p Confidence Level: 2 Specificity not completely determined. Can also catalyse ribosyltransferase reactions of the type catalysed by EC 2.4.2.5, nucleoside ribosyltransferase genes: LOCUS:BPLAN_265#ABBREVIATION:xapA#ECNUMBERS:2.4.2.1# proteins: NAME:purine nucleoside phosphorylase#ABBREVIATION:XapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_265)
product: 752298
fast: false
reactant: 752286
product: 752310
name: purine-nucleoside phosphorylase (Adenosine)
reversible: true
kinetic law: 752322
reactant: 752274

752298
type: SpeciesReference
stoichiometry: 1.0
species: 539607

752286
type: SpeciesReference
stoichiometry: 1.0
species: 540013

752310
type: SpeciesReference
stoichiometry: 1.0
species: 540040

543556
type: LocalParameter
value: 0.0

543554
type: LocalParameter
value: 0.0

543552
type: LocalParameter
value: 999999.0

543550
type: LocalParameter
value: -999999.0

752274
type: SpeciesReference
stoichiometry: 1.0
species: 539609

540727
type: Reaction
fast: false
product: 741250
product: 741238
name: L-glutamate 5-semialdehyde dehydratase (spontaneous)
product: 741226
reactant: 741214
reversible: false
notes: Abbreviation: R_G5SADs Synonyms: _0 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : glu5sa --> 1pyr5c + h + h2o Confidence Level: 1 Needed in L-proline biosynthesis genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 741262

741250
type: SpeciesReference
stoichiometry: 1.0
species: 539779

741238
type: SpeciesReference
stoichiometry: 1.0
species: 539783

741226
type: SpeciesReference
stoichiometry: 1.0
species: 539482

539482
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _1-Pyrroline-5-carboxylate_C5H6NO2

741214
type: SpeciesReference
stoichiometry: 1.0
species: 539758

542488
type: LocalParameter
value: 0.0

542487
type: LocalParameter
value: 0.0

542485
type: LocalParameter
value: 999999.0

542484
type: LocalParameter
value: 0.0

541087
type: Reaction
reactant: 749346
reactant: 749358
product: 749370
notes: Abbreviation: R_ORPT Synonyms: _0 EC Number: 2.4.2.10 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : orot + prpp --> orot5p + ppi Confidence Level: 2 genes: LOCUS:BPLAN_128#ABBREVIATION:pyrFE#ECNUMBERS:2.4.2.10# proteins: NAME:Orotidine 5'-phosphate decarboxylase-Orotate phosphoribosyltransferase#ABBREVIATION:PyrFE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_128)
kinetic law: 749394
name: orotate phosphoribosyltransferase
reversible: false
product: 749382
fast: false

749346
type: SpeciesReference
stoichiometry: 1.0
species: 539996

749358
type: SpeciesReference
stoichiometry: 1.0
species: 540031

749370
type: SpeciesReference
stoichiometry: 1.0
species: 539993

543255
type: LocalParameter
value: 0.0

543253
type: LocalParameter
value: 0.0

543251
type: LocalParameter
value: 999999.0

543249
type: LocalParameter
value: 0.0

749382
type: SpeciesReference
stoichiometry: 1.0
species: 540021

540712
type: Reaction
product: 740936
product: 740948
fast: false
kinetic law: 740960
notes: Abbreviation: R_FTHFCL Synonyms: _0 EC Number: 6.3.3.2 SUBSYSTEM: Cofactor Metabolism Equation: [c] : 5fthf + atp --> adp + methf + pi Confidence Level: 2 NCD genes: LOCUS:BPLAN_505#ABBREVIATION:ygfA#ECNUMBERS:6.3.3.2# proteins: NAME:5-formyltetrahydrofolate cyclo-ligase#ABBREVIATION:YgfA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_505)
product: 740923
reactant: 740911
name: _5-formethyltetrahydrofolate cyclo-ligase
reversible: false
reactant: 740899

740936
type: SpeciesReference
stoichiometry: 1.0
species: 539948

740948
type: SpeciesReference
stoichiometry: 1.0
species: 540013

542458
type: LocalParameter
value: 0.0

542457
type: LocalParameter
value: 0.0

542455
type: LocalParameter
value: 999999.0

542454
type: LocalParameter
value: 0.0

740923
type: SpeciesReference
stoichiometry: 1.0
species: 539611

740911
type: SpeciesReference
stoichiometry: 1.0
species: 539659

740899
type: SpeciesReference
stoichiometry: 1.0
species: 539574

539574
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _5-Formyltetrahydrofolate_C20H21N7O7

541072
type: Reaction
reactant: 749043
notes: Abbreviation: R_OCTDPS Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : frdp + (5) ipdp --> octdp + (5) ppi Confidence Level: 2 JLR- EC 2.5.1.- genes: LOCUS:BPLAN_338#ABBREVIATION:ispB#ECNUMBERS:2.5.1.-# proteins: NAME:Octaprenyl-diphosphate synthase#ABBREVIATION:IspB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_338)
reactant: 749030
name: Octaprenyl pyrophosphate synthase
product: 749056
fast: false
product: 749069
kinetic law: 749081
reversible: false

749043
type: SpeciesReference
stoichiometry: 5.0
species: 539926

749030
type: SpeciesReference
stoichiometry: 1.0
species: 539743

749056
type: SpeciesReference
stoichiometry: 1.0
species: 539987

749069
type: SpeciesReference
stoichiometry: 5.0
species: 540021

543220
type: LocalParameter
value: 0.0

543218
type: LocalParameter
value: 0.0

543216
type: LocalParameter
value: 999999.0

543214
type: LocalParameter
value: 0.0

541177
type: Reaction
kinetic law: 751414
product: 751402
reactant: 751390
reactant: 751378
notes: Abbreviation: R_PRAMPC Synonyms: _0 EC Number: 3.5.4.19 SUBSYSTEM: Histidine Metabolism Equation: [c] : h2o + prbamp --> prfp Confidence Level: 2 genes: LOCUS:BPLAN_200#ABBREVIATION:hisI#ECNUMBERS:3.5.4.19,-!-,3.6.1.31# proteins: NAME:Phosphoribosyl-ATP pyrophosphatase and -AMP cyclohydrolase#ABBREVIATION:HisI# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_200)
fast: false
reversible: false
name: phosphoribosyl-AMP cyclohydrolase

543465
type: LocalParameter
value: 0.0

543463
type: LocalParameter
value: 0.0

543461
type: LocalParameter
value: 999999.0

543459
type: LocalParameter
value: 0.0

751402
type: SpeciesReference
stoichiometry: 1.0
species: 540026

751390
type: SpeciesReference
stoichiometry: 1.0
species: 540024

751378
type: SpeciesReference
stoichiometry: 1.0
species: 539779

541261
type: Reaction
kinetic law: 753300
reactant: 753252
product: 753288
product: 753264
reactant: 753240
notes: Abbreviation: R_RNDR2 Synonyms: _0 EC Number: 1.17.4.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : gdp + trdrd --> dgdp + h2o + trdox Confidence Level: 2 genes: LOCUS:BPLAN_330#ABBREVIATION:nrdE#ECNUMBERS:1.17.4.1# LOCUS:BPLAN_p004#ABBREVIATION:nrdF#ECNUMBERS:1.17.4.1# proteins: NAME:Ribonucleoside diphosphate reductase subunit alpha#ABBREVIATION:NrdE# NAME:ribonucleotide-diphosphate reductase beta subunit#ABBREVIATION:NrdE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_330 and BPLAN_p004)
fast: false
name: ribonucleoside-diphosphate reductase (GDP)
product: 753276
reversible: false

543661
type: LocalParameter
value: 0.0

543659
type: LocalParameter
value: 0.0

543657
type: LocalParameter
value: 999999.0

543655
type: LocalParameter
value: 0.0

753252
type: SpeciesReference
stoichiometry: 1.0
species: 540093

753288
type: SpeciesReference
stoichiometry: 1.0
species: 540092

540092
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Oxidized thioredoxin_X

753264
type: SpeciesReference
stoichiometry: 1.0
species: 539698

539698
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: dGDP_C10H12N5O10P2

753240
type: SpeciesReference
stoichiometry: 1.0
species: 539754

753276
type: SpeciesReference
stoichiometry: 1.0
species: 539779

540241
type: Reaction
reactant: 731091
product: 731115
notes: Abbreviation: R_ACPS1 Synonyms: _0 EC Number: 2.7.8.7 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : apoACP + coa --> ACP + h + pap Confidence Level: 4 JLR genes: LOCUS:BPLAN_263#ABBREVIATION:acpT#ECNUMBERS:2.7.8.7# proteins: NAME:holo-(acyl carrier protein) synthase 2#ABBREVIATION:AcpT# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_263)
reactant: 731103
name: acyl-carrier protein synthase
reversible: false
product: 731127
product: 731139
fast: false
kinetic law: 731151

731091
type: SpeciesReference
stoichiometry: 1.0
species: 539641

731115
type: SpeciesReference
stoichiometry: 1.0
species: 539601

731103
type: SpeciesReference
stoichiometry: 1.0
species: 539677

731127
type: SpeciesReference
stoichiometry: 1.0
species: 539783

731139
type: SpeciesReference
stoichiometry: 1.0
species: 540002

540002
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Adenosine 3',5'-bisphosphate_C10H11N5O10P2

541529
type: LocalParameter
value: 0.0

541527
type: LocalParameter
value: 0.0

541526
type: LocalParameter
value: 999999.0

541524
type: LocalParameter
value: 0.0

540793
type: Reaction
kinetic law: 742781
product: 742768
reactant: 742756
notes: Abbreviation: R_H2Ot Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: h2o[e] <==> h2o[c] Confidence Level: 1 renamed from H20t5 to H2Ot genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: H2O transport via diffusion

542620
type: LocalParameter
value: 0.0

542618
type: LocalParameter
value: 0.0

542617
type: LocalParameter
value: 999999.0

542615
type: LocalParameter
value: -999999.0

742768
type: SpeciesReference
stoichiometry: 1.0
species: 539779

742756
type: SpeciesReference
stoichiometry: 1.0
species: 539780

540147
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: D-Glyceraldehyde_C3H6O3

539586
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Acetate_C2H3O2

540697
type: Reaction
fast: false
product: 740670
product: 740658
reversible: false
product: 740634
notes: Abbreviation: R_FE2abc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + fe2[e] + h2o[c] --> adp[c] + fe2[c] + h[c] + pi[c] Confidence Level: 2 genes: LOCUS:BPLAN_508#ABBREVIATION:feoB# proteins: NAME:Iron(II) transport protein#ABBREVIATION:FeoB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_508)
reactant: 740622
name: iron (II) transport via ABC system
product: 740646
reactant: 740597
reactant: 740610
kinetic law: 740682

740670
type: SpeciesReference
stoichiometry: 1.0
species: 540013

740658
type: SpeciesReference
stoichiometry: 1.0
species: 539783

740634
type: SpeciesReference
stoichiometry: 1.0
species: 539611

740622
type: SpeciesReference
stoichiometry: 1.0
species: 539779

740646
type: SpeciesReference
stoichiometry: 1.0
species: 539735

539735
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Fe2+_Fe

740597
type: SpeciesReference
stoichiometry: 1.0
species: 539659

740610
type: SpeciesReference
stoichiometry: 1.0
species: 539736

542428
type: LocalParameter
value: 0.0

542427
type: LocalParameter
value: 0.0

542425
type: LocalParameter
value: 999999.0

542424
type: LocalParameter
value: 0.0

540394
type: Reaction
reactant: 735344
product: 735356
name: carbamoyl-phosphate synthase (glutamine-hydrolysing)
product: 735368
notes: Abbreviation: R_CBPS Synonyms: _0 EC Number: 6.3.5.5 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : (2) atp + gln-L + h2o + hco3 --> (2) adp + cbp + glu-L + (2) h + pi Confidence Level: 2 genes: LOCUS:BPLAN_324#ABBREVIATION:carA#ECNUMBERS:6.3.5.5# LOCUS:BPLAN_323#ABBREVIATION:carB#ECNUMBERS:6.3.5.5# proteins: NAME:carbamoyl-phosphate synthetase#ABBREVIATION:Car# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_324 and BPLAN_323)
product: 735380
reversible: false
product: 735405
product: 735393
reactant: 735320
reactant: 735332
fast: false
kinetic law: 735417
reactant: 735308

735344
type: SpeciesReference
stoichiometry: 1.0
species: 539785

735356
type: SpeciesReference
stoichiometry: 2.0
species: 539611

735368
type: SpeciesReference
stoichiometry: 1.0
species: 539661

539661
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Carbamoyl phosphate_CH2NO5P

735380
type: SpeciesReference
stoichiometry: 1.0
species: 539760

735405
type: SpeciesReference
stoichiometry: 1.0
species: 540013

735393
type: SpeciesReference
stoichiometry: 2.0
species: 539783

735320
type: SpeciesReference
stoichiometry: 1.0
species: 539756

735332
type: SpeciesReference
stoichiometry: 1.0
species: 539779

541832
type: LocalParameter
value: 0.0

541831
type: LocalParameter
value: 0.0

541829
type: LocalParameter
value: 999999.0

541828
type: LocalParameter
value: 0.0

735308
type: SpeciesReference
stoichiometry: 2.0
species: 539659

540502
type: Reaction
kinetic law: 737800
product: 737775
fast: false
product: 737763
reversible: false
name: dihydropteroate synthase
reactant: 737751
reactant: 737739
product: 737787
notes: Abbreviation: R_DHPS2 Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 4abz + 6hmhptpp --> dhpt + h + ppi Confidence Level: 2 JLR- similar to DHPS except uses 6hmhptpp (has ketone rather than OH) genes: LOCUS:BPLAN_533#ABBREVIATION:folP#ECNUMBERS:2.5.1.15# proteins: NAME:Dihydropteroate synthase#ABBREVIATION:FolP# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_533)

542038
type: LocalParameter
value: 0.0

542037
type: LocalParameter
value: 0.0

542035
type: LocalParameter
value: 999999.0

542034
type: LocalParameter
value: 0.0

737775
type: SpeciesReference
stoichiometry: 1.0
species: 539783

737763
type: SpeciesReference
stoichiometry: 1.0
species: 539711

737751
type: SpeciesReference
stoichiometry: 1.0
species: 539582

737739
type: SpeciesReference
stoichiometry: 1.0
species: 539545

539545
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _4-Aminobenzoate_C7H6NO2

737787
type: SpeciesReference
stoichiometry: 1.0
species: 540021

540547
type: Reaction
kinetic law: 738763
product: 738751
reactant: 738739
notes: Abbreviation: R_EX_ac_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : ac <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Acetate exchange

542128
type: LocalParameter
value: 0.0

542127
type: LocalParameter
value: 0.0

542125
type: LocalParameter
value: 999999.0

542124
type: LocalParameter
value: 0.0

738751
type: SpeciesReference
stoichiometry: 1.0
species: 540128

540128
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Acetate_C2H3O2

738739
type: SpeciesReference
stoichiometry: 1.0
species: 539586

540904
type: Reaction
name: malate dehydrogenase
product: 745333
reversible: true
reactant: 745297
fast: false
kinetic law: 745357
notes: Abbreviation: R_MDH Synonyms: _0 EC Number: 1.1.1.37 SUBSYSTEM: Citric Acid Cycle Equation: [c] : mal-L + nad <==> h + nadh + oaa Confidence Level: 2 genes: LOCUS:BPLAN_024#ABBREVIATION:mdh#ECNUMBERS:1.1.1.37# proteins: NAME:malate dehydrogenase#ABBREVIATION:Mdh# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_024)
reactant: 745309
product: 745345
product: 745321

745333
type: SpeciesReference
stoichiometry: 1.0
species: 539966

745297
type: SpeciesReference
stoichiometry: 1.0
species: 539941

542846
type: LocalParameter
value: 0.0

542844
type: LocalParameter
value: 0.0

542843
type: LocalParameter
value: 999999.0

542841
type: LocalParameter
value: -999999.0

745309
type: SpeciesReference
stoichiometry: 1.0
species: 539964

745345
type: SpeciesReference
stoichiometry: 1.0
species: 539986

745321
type: SpeciesReference
stoichiometry: 1.0
species: 539783

540871
type: Reaction
product: 744473
kinetic law: 744497
name: ketol-acid reductoisomerase (2-Aceto-2-hydroxybutanoate)
notes: Abbreviation: R_KARA2i Synonyms: _0 EC Number: 1.1.1.86 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 2ahbut + h + nadph --> 23dhmp + nadp Confidence Level: 2 JLR - added irreversible form of KARA2 genes: LOCUS:BPLAN_086#ABBREVIATION:ilvC#ECNUMBERS:1.1.1.86# proteins: NAME:acetohydroxy acid isomeroreductase#ABBREVIATION:IlvC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_086)
fast: false
reactant: 744449
reactant: 744461
reactant: 744437
reversible: false
product: 744485

744473
type: SpeciesReference
stoichiometry: 1.0
species: 539488

542780
type: LocalParameter
value: 0.0

542778
type: LocalParameter
value: 0.0

542777
type: LocalParameter
value: 999999.0

542775
type: LocalParameter
value: 0.0

744449
type: SpeciesReference
stoichiometry: 1.0
species: 539783

744461
type: SpeciesReference
stoichiometry: 1.0
species: 539969

744437
type: SpeciesReference
stoichiometry: 1.0
species: 539498

744485
type: SpeciesReference
stoichiometry: 1.0
species: 539967

540919
type: Reaction
reversible: false
product: 745719
name: _mevalonate kinase
kinetic law: 745743
notes: Abbreviation: R_MEVK1x Synonyms: _0 EC Number: 2.7.1.36 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c]: atp + mev-R --> 5pmev + adp + (2) h Confidence Level: 2 genes: LOCUS:BPLAN_549#ABBREVIATION:mvaK#ECNUMBERS:2.7.1.36# proteins: NAME:_mevalonate kinase#ABBREVIATION:MvaK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_549)
product: 745731
fast: false
reactant: 745683
product: 745707
reactant: 745695

745719
type: SpeciesReference
stoichiometry: 1.0
species: 539578

542876
type: LocalParameter
value: 0.0

542874
type: LocalParameter
value: 0.0

542873
type: LocalParameter
value: 999999.0

542871
type: LocalParameter
value: 0.0

745731
type: SpeciesReference
stoichiometry: 2.0
species: 539783

745683
type: SpeciesReference
stoichiometry: 1.0
species: 539659

745707
type: SpeciesReference
stoichiometry: 1.0
species: 539611

745695
type: SpeciesReference
stoichiometry: 1.0
species: 539950

539950
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (R)-mevalonate_C6H11O4

540259
type: Reaction
kinetic law: 731524
product: 731512
reactant: 731500
reactant: 731488
notes: Abbreviation: R_ADK1 Synonyms: _0 EC Number: 2.7.4.3 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : amp + atp <==> (2) adp Confidence Level: 2 Inorganic triphosphate can also act as donor genes: LOCUS:BPLAN_420#ABBREVIATION:adk#ECNUMBERS:2.7.4.3# proteins: NAME:Adenylate kinase#ABBREVIATION:Adk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_420)
fast: false
reversible: true
name: adenylate kinase

541563
type: LocalParameter
value: 0.0

541562
type: LocalParameter
value: 0.0

541560
type: LocalParameter
value: 999999.0

541559
type: LocalParameter
value: -999999.0

731512
type: SpeciesReference
stoichiometry: 2.0
species: 539611

731500
type: SpeciesReference
stoichiometry: 1.0
species: 539659

731488
type: SpeciesReference
stoichiometry: 1.0
species: 539638

540532
type: Reaction
reactant: 738412
product: 738424
reactant: 738399
name: deoxyuridine phosphorylase
notes: Abbreviation: R_DURIPP Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : duri + pi <==> 2dr1p + ura Confidence Level: 2 JLR genes: LOCUS:BPLAN_265#ABBREVIATION:deoD#ECNUMBERS:2.4.2.1# proteins: NAME:Purine-nucleoside phosphorylase#ABBREVIATION:DeoD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_265)
reversible: true
kinetic law: 738448
product: 738436
fast: false

738412
type: SpeciesReference
stoichiometry: 1.0
species: 540013

738424
type: SpeciesReference
stoichiometry: 1.0
species: 539508

738399
type: SpeciesReference
stoichiometry: 1.0
species: 539724

542098
type: LocalParameter
value: 0.0

542097
type: LocalParameter
value: 0.0

542095
type: LocalParameter
value: 999999.0

542094
type: LocalParameter
value: -999999.0

738436
type: SpeciesReference
stoichiometry: 1.0
species: 540116

540415
type: Reaction
fast: false
reversible: false
notes: Abbreviation: R_CYSabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + cys-L[e] + h2o[c] --> adp[c] + cys-L[c] + h[c] + pi[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 735819
reactant: 735807
product: 735879
reactant: 735831
name: L-cysteine transport via ABC system
kinetic law: 735891
product: 735867
product: 735843
product: 735855

735819
type: SpeciesReference
stoichiometry: 1.0
species: 539683

735807
type: SpeciesReference
stoichiometry: 1.0
species: 539659

735879
type: SpeciesReference
stoichiometry: 1.0
species: 540013

735831
type: SpeciesReference
stoichiometry: 1.0
species: 539779

541874
type: LocalParameter
value: 0.0

541873
type: LocalParameter
value: 0.0

541871
type: LocalParameter
value: 999999.0

541870
type: LocalParameter
value: 0.0

735867
type: SpeciesReference
stoichiometry: 1.0
species: 539783

735843
type: SpeciesReference
stoichiometry: 1.0
species: 539611

735855
type: SpeciesReference
stoichiometry: 1.0
species: 539682

539522
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3-Carboxy-2-hydroxy-4-methylpentanoate_C7H10O5

540721
type: Reaction
kinetic law: 741142
product: 741130
fast: false
reactant: 741082
product: 741106
reactant: 741094
notes: Abbreviation: R_G1PACT Synonyms: _0 EC Number: 2.3.1.157 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : accoa + gam1p --> acgam1p + coa + h Confidence Level: 2 genes: LOCUS:BPLAN_036#ABBREVIATION:galU#ECNUMBERS:2.7.7.23# proteins: NAME:UTP-glucose-1-phosphate uridylyltransferase#ABBREVIATION:galU# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_036)
name: glucosamine-1-phosphate N-acetyltransferase
product: 741118
reversible: false

542476
type: LocalParameter
value: 0.0

542475
type: LocalParameter
value: 0.0

542473
type: LocalParameter
value: 999999.0

542472
type: LocalParameter
value: 0.0

741130
type: SpeciesReference
stoichiometry: 1.0
species: 539783

741082
type: SpeciesReference
stoichiometry: 1.0
species: 539590

741106
type: SpeciesReference
stoichiometry: 1.0
species: 539595

741094
type: SpeciesReference
stoichiometry: 1.0
species: 539750

741118
type: SpeciesReference
stoichiometry: 1.0
species: 539677

540886
type: Reaction
notes: Abbreviation: R_Kt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: h[e] + k[e] <==> h[c] + k[c] Confidence Level: 2 JLR genes: LOCUS:BPLAN_066#ABBREVIATION:ktrB# LOCUS:BPLAN_065#ABBREVIATION:ktrA# proteins: NAME:K+ uptake transporter subunit KtrB#ABBREVIATION:KtrB# NAME:K+ uptake transporter subunit KtrA#ABBREVIATION:KtrA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_066) and (BPLAN_065)
reversible: true
product: 744898
product: 744886
reactant: 744874
fast: false
kinetic law: 744910
name: potassium reversible transport via proton symport
reactant: 744862

744898
type: SpeciesReference
stoichiometry: 1.0
species: 539929

744886
type: SpeciesReference
stoichiometry: 1.0
species: 539783

744874
type: SpeciesReference
stoichiometry: 1.0
species: 539931

542810
type: LocalParameter
value: 0.0

542808
type: LocalParameter
value: 0.0

542807
type: LocalParameter
value: 999999.0

542805
type: LocalParameter
value: -999999.0

744862
type: SpeciesReference
stoichiometry: 1.0
species: 539784

540400
type: Reaction
kinetic law: 735502
product: 735490
product: 735477
reactant: 735465
notes: Abbreviation: R_CHORS Synonyms: _0 EC Number: 4.2.3.5 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : 3psme --> chor + pi Confidence Level: 2 Previously EC 4.6.1.4. Now EC 4.2.3.5 genes: LOCUS:BPLAN_450#ABBREVIATION:aroC#ECNUMBERS:4.2.3.5# proteins: NAME:Chorismate synthase#ABBREVIATION:AroC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_450)
fast: false
reversible: false
name: chorismate synthase

541844
type: LocalParameter
value: 0.0

541843
type: LocalParameter
value: 0.0

541841
type: LocalParameter
value: 999999.0

541840
type: LocalParameter
value: 0.0

735490
type: SpeciesReference
stoichiometry: 1.0
species: 540013

735477
type: SpeciesReference
stoichiometry: 1.0
species: 539667

735465
type: SpeciesReference
stoichiometry: 1.0
species: 539544

541336
type: Reaction
product: 754908
name: L-threonine transport via ABC system
notes: Abbreviation: R_THRabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + h2o[c] + thr-L[e] --> adp[c] + h[c] + pi[c] + thr-L[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 754921
reactant: 754896
fast: false
reversible: false
product: 754945
product: 754933
reactant: 754884
reactant: 754872
kinetic law: 754957

754908
type: SpeciesReference
stoichiometry: 1.0
species: 539611

754921
type: SpeciesReference
stoichiometry: 1.0
species: 539783

754896
type: SpeciesReference
stoichiometry: 1.0
species: 540088

754945
type: SpeciesReference
stoichiometry: 1.0
species: 540087

754933
type: SpeciesReference
stoichiometry: 1.0
species: 540013

754884
type: SpeciesReference
stoichiometry: 1.0
species: 539779

754872
type: SpeciesReference
stoichiometry: 1.0
species: 539659

543836
type: LocalParameter
value: 0.0

543834
type: LocalParameter
value: 0.0

543832
type: LocalParameter
value: 999999.0

543830
type: LocalParameter
value: 0.0

540682
type: Reaction
kinetic law: 740393
product: 740381
reactant: 740369
notes: Abbreviation: R_EX_urea_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : urea <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Urea exchange

542398
type: LocalParameter
value: 0.0

542397
type: LocalParameter
value: 0.0

542395
type: LocalParameter
value: 999999.0

542394
type: LocalParameter
value: 0.0

740381
type: SpeciesReference
stoichiometry: 1.0
species: 540210

740369
type: SpeciesReference
stoichiometry: 1.0
species: 540118

541366
type: Reaction
notes: Abbreviation: R_TRDR Synonyms: _0 EC Number: 1.8.1.9 SUBSYSTEM: Oxidative Phosphorylation Equation: [c] : h + nadph + trdox --> nadp + trdrd Confidence Level: 2 genes: LOCUS:BPLAN_588#ABBREVIATION:trxB#ECNUMBERS:1.8.1.9# proteins: NAME:Thioredoxin reductase#ABBREVIATION:TrxB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_588)
product: 755535
fast: false
product: 755548
kinetic law: 755561
reactant: 755511
name: thioredoxin reductase (NADPH)
reversible: false
reactant: 755523
reactant: 755499

755535
type: SpeciesReference
stoichiometry: 1.0
species: 539967

755548
type: SpeciesReference
stoichiometry: 1.0
species: 540093

543906
type: LocalParameter
value: 0.0

543904
type: LocalParameter
value: 0.0

543902
type: LocalParameter
value: 999999.0

543900
type: LocalParameter
value: 0.0

755511
type: SpeciesReference
stoichiometry: 1.0
species: 539969

755523
type: SpeciesReference
stoichiometry: 1.0
species: 540092

755499
type: SpeciesReference
stoichiometry: 1.0
species: 539783

540180
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: (R)-Pantothenate_C9H16NO5

540796
type: Reaction
kinetic law: 742817
product: 742805
reactant: 742793
notes: Abbreviation: R_H2St1 Synonyms: _0 SUBSYSTEM: Transport Equation: h2s[e] <==> h2s[c] Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: h2s transport (diffusion)

542626
type: LocalParameter
value: 0.0

542624
type: LocalParameter
value: 0.0

542623
type: LocalParameter
value: 999999.0

542621
type: LocalParameter
value: -999999.0

742805
type: SpeciesReference
stoichiometry: 1.0
species: 539782

742793
type: SpeciesReference
stoichiometry: 1.0
species: 539781

540517
type: Reaction
product: 738087
reactant: 738039
product: 738063
name: Dihydroneopterin triphosphate pyrophosphatase
reversible: false
product: 738075
kinetic law: 738099
fast: false
reactant: 738051
notes: Abbreviation: R_DNTPPA Synonyms: _1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : ahdt + h2o --> dhpmp + h + ppi Confidence Level: 2 JLR- Neidhardt pg 667 genes: LOCUS:BPLAN_445#ABBREVIATION:idi#ECNUMBERS:5.3.3.2# proteins: NAME:isopentenyl diphosphate isomerase#ABBREVIATION:Idi# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_445)

738087
type: SpeciesReference
stoichiometry: 1.0
species: 540021

738039
type: SpeciesReference
stoichiometry: 1.0
species: 539616

738063
type: SpeciesReference
stoichiometry: 1.0
species: 539710

738075
type: SpeciesReference
stoichiometry: 1.0
species: 539783

542068
type: LocalParameter
value: 0.0

542067
type: LocalParameter
value: 0.0

542065
type: LocalParameter
value: 999999.0

542064
type: LocalParameter
value: 0.0

738051
type: SpeciesReference
stoichiometry: 1.0
species: 539779

540349
type: Reaction
reactant: 733517
name: L-asparagine reversible transport via proton symport
product: 733553
reactant: 733529
product: 733541
notes: Abbreviation: R_ASNt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: asn-L[e] + h[e] <==> asn-L[c] + h[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 733565
fast: false
reversible: true

733517
type: SpeciesReference
stoichiometry: 1.0
species: 539651

733553
type: SpeciesReference
stoichiometry: 1.0
species: 539783

733529
type: SpeciesReference
stoichiometry: 1.0
species: 539784

733541
type: SpeciesReference
stoichiometry: 1.0
species: 539649

541742
type: LocalParameter
value: 0.0

541741
type: LocalParameter
value: 0.0

541739
type: LocalParameter
value: 999999.0

541738
type: LocalParameter
value: -999999.0

540466
type: Reaction
reactant: 736979
product: 737003
notes: Abbreviation: R_DGK1 Synonyms: _0 EC Number: 2.7.4.8 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dgmp <==> adp + dgdp Confidence Level: 2 Added EC- JLR genes: LOCUS:BPLAN_343#ABBREVIATION:gmk#ECNUMBERS:2.7.4.8# proteins: NAME:Guanylate kinase#ABBREVIATION:Gmk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_343)
name: deoxyguanylate kinase (dGMP:ATP)
reversible: true
product: 737015
fast: false
reactant: 736991
kinetic law: 737027

736979
type: SpeciesReference
stoichiometry: 1.0
species: 539659

737003
type: SpeciesReference
stoichiometry: 1.0
species: 539611

737015
type: SpeciesReference
stoichiometry: 1.0
species: 539698

736991
type: SpeciesReference
stoichiometry: 1.0
species: 539699

541970
type: LocalParameter
value: 0.0

541969
type: LocalParameter
value: 0.0

541967
type: LocalParameter
value: 999999.0

541966
type: LocalParameter
value: -999999.0

540304
type: Reaction
reversible: false
product: 732538
fast: false
reactant: 732478
product: 732526
product: 732514
kinetic law: 732550
reactant: 732490
name: D-alanine-D-alanine ligase
product: 732502
notes: Abbreviation: R_ALAALAr Synonyms: _0 EC Number: 6.3.2.4 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : (2) ala-D + atp --> adp + alaala + h + pi Confidence Level: 2 JLR- added reversible form of ALAALA genes: LOCUS:BPLAN_509#ABBREVIATION:ddlB#ECNUMBERS:6.3.2.4# proteins: NAME:D-alanine-D-alanine ligase A#ABBREVIATION:DdlA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_509)

732538
type: SpeciesReference
stoichiometry: 1.0
species: 540013

732478
type: SpeciesReference
stoichiometry: 2.0
species: 539626

539626
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: D-Alanine_C3H7NO2

732526
type: SpeciesReference
stoichiometry: 1.0
species: 539783

732514
type: SpeciesReference
stoichiometry: 1.0
species: 539632

541652
type: LocalParameter
value: 0.0

541651
type: LocalParameter
value: 0.0

541649
type: LocalParameter
value: 999999.0

541648
type: LocalParameter
value: 0.0

732490
type: SpeciesReference
stoichiometry: 1.0
species: 539659

732502
type: SpeciesReference
stoichiometry: 1.0
species: 539611

540706
type: Reaction
kinetic law: 740851
product: 740839
reactant: 740827
notes: Abbreviation: R_FORt Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: for[e] <==> for[c] Confidence Level: 1 renamed from FORTR to FORt NCD genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: formate transport via diffusion

542446
type: LocalParameter
value: 0.0

542445
type: LocalParameter
value: 0.0

542443
type: LocalParameter
value: 999999.0

542442
type: LocalParameter
value: -999999.0

740839
type: SpeciesReference
stoichiometry: 1.0
species: 539739

740827
type: SpeciesReference
stoichiometry: 1.0
species: 539740

540928
type: Reaction
product: 745913
name: _5,10-methylenetetrahydrofolate reductase (NADH)
reactant: 745901
reversible: true
fast: false
reactant: 745889
notes: Abbreviation: R_MTHFR2 Synonyms: _0 SUBSYSTEM: Folate Metabolism Equation: [c] : h + mlthf + nadh <==> 5mthf + nad Confidence Level: 2 tv genes: LOCUS:BPLAN_195#ABBREVIATION:metF#ECNUMBERS:1.7.99.5# proteins: NAME:Methylenetetrahydrofolate reductase#ABBREVIATION:MetF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_195)
kinetic law: 745937
product: 745925
reactant: 745877

745913
type: SpeciesReference
stoichiometry: 1.0
species: 539576

745901
type: SpeciesReference
stoichiometry: 1.0
species: 539966

745889
type: SpeciesReference
stoichiometry: 1.0
species: 539952

542894
type: LocalParameter
value: 0.0

542892
type: LocalParameter
value: 0.0

542891
type: LocalParameter
value: 999999.0

542889
type: LocalParameter
value: -999999.0

745925
type: SpeciesReference
stoichiometry: 1.0
species: 539964

745877
type: SpeciesReference
stoichiometry: 1.0
species: 539783

540201
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Threonine_C4H9NO3

540268
type: Reaction
product: 731705
fast: false
notes: Abbreviation: R_ADNK1 Synonyms: _0 EC Number: 2.7.1.20 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : adn + atp <==> adp + amp + h Confidence Level: 2 _2-Aminoadenosine can also act as acceptor genes: LOCUS:BPLAN_420#ABBREVIATION:adk#ECNUMBERS:2.7.4.3# proteins: NAME:Adenylate kinase#ABBREVIATION:Adk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_420)
kinetic law: 731717
reactant: 731657
reversible: true
name: adenosine kinase
product: 731681
reactant: 731669
product: 731693

731705
type: SpeciesReference
stoichiometry: 1.0
species: 539783

541581
type: LocalParameter
value: 0.0

541579
type: LocalParameter
value: 0.0

541578
type: LocalParameter
value: 999999.0

541576
type: LocalParameter
value: -999999.0

731657
type: SpeciesReference
stoichiometry: 1.0
species: 539609

731681
type: SpeciesReference
stoichiometry: 1.0
species: 539611

731669
type: SpeciesReference
stoichiometry: 1.0
species: 539659

731693
type: SpeciesReference
stoichiometry: 1.0
species: 539638

540334
type: Reaction
reactant: 733179
reactant: 733167
product: 733191
notes: Abbreviation: R_ARGDC Synonyms: _0 EC Number: 4.1.1.19 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : arg-L + h --> agm + co2 Confidence Level: 2 genes: LOCUS:BPLAN_573#ABBREVIATION:speA#ECNUMBERS:4.1.1.19# proteins: NAME:Arginine decarboxylase#ABBREVIATION:SpeA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_573)
reversible: false
fast: false
name: arginine decarboxylase
kinetic law: 733215
product: 733203

733179
type: SpeciesReference
stoichiometry: 1.0
species: 539783

733167
type: SpeciesReference
stoichiometry: 1.0
species: 539643

733191
type: SpeciesReference
stoichiometry: 1.0
species: 539613

541712
type: LocalParameter
value: 0.0

541711
type: LocalParameter
value: 0.0

541709
type: LocalParameter
value: 999999.0

541708
type: LocalParameter
value: 0.0

733203
type: SpeciesReference
stoichiometry: 1.0
species: 539673

540481
type: Reaction
notes: Abbreviation: R_DHFR Synonyms: _0 EC Number: 1.5.1.3 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : dhf + h + nadph <==> nadp + thf Confidence Level: 2 The enzyme from animals and some micro-organisms also slowly reduces folate to 5,6,7,8-tetrahydrofolate genes: LOCUS:BPLAN_191#ABBREVIATION:folA#ECNUMBERS:1.5.1.3# proteins: NAME:dihydrofolate reductase#ABBREVIATION:FolA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_191)
reversible: true
reactant: 737279
reactant: 737291
name: dihydrofolate reductase
kinetic law: 737339
reactant: 737303
product: 737315
fast: false
product: 737327

737279
type: SpeciesReference
stoichiometry: 1.0
species: 539704

737291
type: SpeciesReference
stoichiometry: 1.0
species: 539783

541998
type: LocalParameter
value: 0.0

541996
type: LocalParameter
value: 0.0

541995
type: LocalParameter
value: 999999.0

541993
type: LocalParameter
value: -999999.0

737303
type: SpeciesReference
stoichiometry: 1.0
species: 539969

737315
type: SpeciesReference
stoichiometry: 1.0
species: 539967

737327
type: SpeciesReference
stoichiometry: 1.0
species: 540083

540319
type: Reaction
product: 732805
reactant: 732793
reactant: 732780
fast: false
kinetic law: 732841
name: S-adenosylmethione:2-demthylmenaquinole methyltransferase (menaquinone 8)
product: 732817
reversible: false
product: 732829
notes: Abbreviation: R_AMMQLT8 Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 2dmmql8 + amet --> ahcys + h + mql8 Confidence Level: 2 AMF genes: LOCUS:BPLAN_525#ABBREVIATION:ubiE#ECNUMBERS:2.1.1.-# proteins: NAME:_2-DMK methyltransferase and 2-octaprenyl-6-methoxy-1,4-benzoquinonol methylase#ABBREVIATION:UbiE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_525)

732805
type: SpeciesReference
stoichiometry: 1.0
species: 539615

732793
type: SpeciesReference
stoichiometry: 1.0
species: 539636

732780
type: SpeciesReference
stoichiometry: 1.0
species: 539506

541682
type: LocalParameter
value: 0.0

541681
type: LocalParameter
value: 0.0

541679
type: LocalParameter
value: 999999.0

541678
type: LocalParameter
value: 0.0

732817
type: SpeciesReference
stoichiometry: 1.0
species: 539783

732829
type: SpeciesReference
stoichiometry: 1.0
species: 539953

540253
type: Reaction
product: 731391
fast: false
product: 731403
name: _4-aminobenzoate synthase
notes: Abbreviation: R_ADCL Synonyms: _1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 4adcho <==> 4abz + h + pyr Confidence Level: 2 Not in IUBMB. No EC EC: 4.1.3.38 IT genes: LOCUS:BPLAN_185#ABBREVIATION:ilvE#ECNUMBERS:4.1.3.38# proteins: NAME:Aminodeoxychorismate lyase#ABBREVIATION:IlvE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_185)
reactant: 731367
product: 731379
kinetic law: 731415
reversible: true

731391
type: SpeciesReference
stoichiometry: 1.0
species: 539783

731403
type: SpeciesReference
stoichiometry: 1.0
species: 540038

731367
type: SpeciesReference
stoichiometry: 1.0
species: 539546

731379
type: SpeciesReference
stoichiometry: 1.0
species: 539545

541552
type: LocalParameter
value: 0.0

541551
type: LocalParameter
value: 0.0

541549
type: LocalParameter
value: 999999.0

541546
type: LocalParameter
value: -999999.0

541051
type: Reaction
reactant: 748574
product: 748610
reactant: 748586
fast: false
name: Nucleoside triphosphate pyrophosphorylase (atp)
product: 748598
notes: Abbreviation: R_NTPP6 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + h2o --> amp + h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_237#ABBREVIATION:mazG# proteins: NAME:Nucleotide triphosphate pyrophosphohydrolase#ABBREVIATION:MazG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_237)
kinetic law: 748634
reversible: false
product: 748622

748574
type: SpeciesReference
stoichiometry: 1.0
species: 539659

748610
type: SpeciesReference
stoichiometry: 1.0
species: 539783

748586
type: SpeciesReference
stoichiometry: 1.0
species: 539779

748598
type: SpeciesReference
stoichiometry: 1.0
species: 539638

543171
type: LocalParameter
value: 0.0

543169
type: LocalParameter
value: 0.0

543167
type: LocalParameter
value: 999999.0

543165
type: LocalParameter
value: 0.0

748622
type: SpeciesReference
stoichiometry: 1.0
species: 540021

541156
type: Reaction
reactant: 750859
reversible: false
product: 750907
product: 750931
notes: Abbreviation: R_PPNCL2 Synonyms: _0 EC Number: 6.3.2.5 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 4ppan + ctp + cys-L --> 4ppcys + cmp + h + ppi Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
product: 750919
fast: false
reactant: 750883
reactant: 750871
name: phosphopantothenate-cysteine ligase
product: 750895
kinetic law: 750943

750859
type: SpeciesReference
stoichiometry: 1.0
species: 539556

750907
type: SpeciesReference
stoichiometry: 1.0
species: 539671

750931
type: SpeciesReference
stoichiometry: 1.0
species: 540021

750919
type: SpeciesReference
stoichiometry: 1.0
species: 539783

750883
type: SpeciesReference
stoichiometry: 1.0
species: 539682

750871
type: SpeciesReference
stoichiometry: 1.0
species: 539681

750895
type: SpeciesReference
stoichiometry: 1.0
species: 539558

543416
type: LocalParameter
value: 0.0

543414
type: LocalParameter
value: 0.0

543412
type: LocalParameter
value: 999999.0

543410
type: LocalParameter
value: 0.0

541240
type: Reaction
product: 752829
product: 752816
reactant: 752780
reversible: false
reactant: 752792
product: 752804
kinetic law: 752841
fast: false
name: pyridoxal kinase
notes: Abbreviation: R_PYDXK Synonyms: _0 EC Number: 2.7.1.35 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + pydx --> adp + h + pydx5p Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:

752829
type: SpeciesReference
stoichiometry: 1.0
species: 540036

752816
type: SpeciesReference
stoichiometry: 1.0
species: 539783

752780
type: SpeciesReference
stoichiometry: 1.0
species: 539659

752792
type: SpeciesReference
stoichiometry: 1.0
species: 540037

752804
type: SpeciesReference
stoichiometry: 1.0
species: 539611

543612
type: LocalParameter
value: 0.0

543610
type: LocalParameter
value: 0.0

543608
type: LocalParameter
value: 999999.0

543606
type: LocalParameter
value: 0.0

540988
type: Reaction
name: nucleoside-diphosphate kinase (ATP:IDP)
reactant: 747268
reversible: true
notes: Abbreviation: R_NDPK9 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + idp <==> adp + itp Confidence Level: 2 NCD genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)
product: 747292
reactant: 747256
product: 747280
fast: false
kinetic law: 747305

747268
type: SpeciesReference
stoichiometry: 1.0
species: 539798

747292
type: SpeciesReference
stoichiometry: 1.0
species: 539927

747256
type: SpeciesReference
stoichiometry: 1.0
species: 539659

747280
type: SpeciesReference
stoichiometry: 1.0
species: 539611

543025
type: LocalParameter
value: 0.0

543023
type: LocalParameter
value: 0.0

543021
type: LocalParameter
value: 999999.0

543019
type: LocalParameter
value: -999999.0

541006
type: Reaction
product: 747644
reversible: false
name: _5'-nucleotidase (XMP)
reactant: 747620
fast: false
kinetic law: 747656
product: 747632
notes: Abbreviation: R_NTD10 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : h2o + xmp --> pi + xtsn Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 747608

747644
type: SpeciesReference
stoichiometry: 1.0
species: 540126

747620
type: SpeciesReference
stoichiometry: 1.0
species: 540125

543066
type: LocalParameter
value: 0.0

543064
type: LocalParameter
value: 0.0

543062
type: LocalParameter
value: 999999.0

543060
type: LocalParameter
value: 0.0

747632
type: SpeciesReference
stoichiometry: 1.0
species: 540013

747608
type: SpeciesReference
stoichiometry: 1.0
species: 539779

540283
type: Reaction
name: N-acetyl-g-glutamyl-phosphate reductase
notes: Abbreviation: R_AGPR Synonyms: _0 EC Number: 1.2.1.38 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : acg5sa + nadp + pi <==> acg5p + h + nadph Confidence Level: 2 genes: LOCUS:BPLAN_326#ABBREVIATION:argC#ECNUMBERS:1.2.1.38# proteins: NAME:N-acetylglutamate phosphate reductase#ABBREVIATION:ArgC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_326)
reversible: true
reactant: 731995
kinetic law: 732055
product: 732019
product: 732031
fast: false
reactant: 732007
product: 732043
reactant: 731983

731995
type: SpeciesReference
stoichiometry: 1.0
species: 539967

541610
type: LocalParameter
value: 0.0

541609
type: LocalParameter
value: 0.0

541607
type: LocalParameter
value: 999999.0

541606
type: LocalParameter
value: -999999.0

732019
type: SpeciesReference
stoichiometry: 1.0
species: 539592

732031
type: SpeciesReference
stoichiometry: 1.0
species: 539783

732007
type: SpeciesReference
stoichiometry: 1.0
species: 540013

732043
type: SpeciesReference
stoichiometry: 1.0
species: 539969

731983
type: SpeciesReference
stoichiometry: 1.0
species: 539593

541330
type: Reaction
product: 754752
reactant: 754716
product: 754740
fast: false
kinetic law: 754764
reactant: 754728
notes: Abbreviation: R_THDPS Synonyms: _0 EC Number: 2.3.1.117 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : h2o + succoa + thdp <==> coa + sl2a6o Confidence Level: 2 genes: LOCUS:BPLAN_173#ABBREVIATION:dapD#ECNUMBERS:2.3.1.117# proteins: NAME:Tetrahydrodipicolinate N-succinultransferase#ABBREVIATION:DapD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_173)
name: tetrahydrodipicolinate succinylase
reactant: 754704
reversible: true

754752
type: SpeciesReference
stoichiometry: 1.0
species: 540071

754716
type: SpeciesReference
stoichiometry: 1.0
species: 540078

754740
type: SpeciesReference
stoichiometry: 1.0
species: 539677

543822
type: LocalParameter
value: 0.0

543820
type: LocalParameter
value: 0.0

543818
type: LocalParameter
value: 999999.0

543816
type: LocalParameter
value: -999999.0

754728
type: SpeciesReference
stoichiometry: 1.0
species: 540082

754704
type: SpeciesReference
stoichiometry: 1.0
species: 539779

540667
type: Reaction
kinetic law: 740213
product: 740201
reactant: 740189
notes: Abbreviation: R_EX_succ_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : succ <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Succinate exchange

542368
type: LocalParameter
value: 0.0

542367
type: LocalParameter
value: 0.0

542365
type: LocalParameter
value: 999999.0

542364
type: LocalParameter
value: 0.0

740201
type: SpeciesReference
stoichiometry: 1.0
species: 540195

540195
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Succinate_C4H4O4

740189
type: SpeciesReference
stoichiometry: 1.0
species: 540077

540973
type: Reaction
reactant: 746954
reactant: 746966
product: 746992
notes: Abbreviation: R_NDPK4 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dtdp <==> adp + dttp Confidence Level: 2 Many nucleoside diphosphates (eight described) can act as acceptors. While many ribo- and deoxyribonucleoside triphosphates can act as donors, only ATP is chosen as a donor to minimize the number of total reactions. genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)
kinetic law: 747004
reversible: true
product: 746979
fast: false
name: nucleoside-diphosphate kinase (ATP:dTDP)

746954
type: SpeciesReference
stoichiometry: 1.0
species: 539659

746966
type: SpeciesReference
stoichiometry: 1.0
species: 539718

746992
type: SpeciesReference
stoichiometry: 1.0
species: 539720

542991
type: LocalParameter
value: 0.0

542989
type: LocalParameter
value: 0.0

542988
type: LocalParameter
value: 999999.0

542986
type: LocalParameter
value: -999999.0

746979
type: SpeciesReference
stoichiometry: 1.0
species: 539611

540856
type: Reaction
fast: false
reversible: false
name: _3-isopropylmalate dehydrogenase
product: 744159
reactant: 744110
product: 744135
kinetic law: 744171
notes: Abbreviation: R_IPMD Synonyms: _0 EC Number: 1.1.1.85 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 3c2hmp + nad --> 3c4mop + h + nadh Confidence Level: 2 genes: LOCUS:BPLAN_564#ABBREVIATION:leuB#ECNUMBERS:1.1.1.85# proteins: NAME:Isopropylmalate dehydrogenase#ABBREVIATION:LeuB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_564)
reactant: 744123
product: 744147

744159
type: SpeciesReference
stoichiometry: 1.0
species: 539966

744110
type: SpeciesReference
stoichiometry: 1.0
species: 539522

744135
type: SpeciesReference
stoichiometry: 1.0
species: 539526

542750
type: LocalParameter
value: 0.0

542748
type: LocalParameter
value: 0.0

542747
type: LocalParameter
value: 999999.0

542745
type: LocalParameter
value: 0.0

744123
type: SpeciesReference
stoichiometry: 1.0
species: 539964

744147
type: SpeciesReference
stoichiometry: 1.0
species: 539783

540586
type: Reaction
kinetic law: 739233
product: 739221
reactant: 739209
notes: Abbreviation: R_EX_gln_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : gln-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Glutamine exchange

542206
type: LocalParameter
value: 0.0

542205
type: LocalParameter
value: 0.0

542203
type: LocalParameter
value: 999999.0

542202
type: LocalParameter
value: -999999.0

739221
type: SpeciesReference
stoichiometry: 1.0
species: 540144

540144
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Glutamine_C5H10N2O3

739209
type: SpeciesReference
stoichiometry: 1.0
species: 539757

540097
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Tyrosine_C9H11NO3

540760
type: Reaction
kinetic law: 742042
product: 742029
reactant: 742017
notes: Abbreviation: R_GLYALDt Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: glyald[e] <==> glyald[c] Confidence Level: 2 JLR genes: LOCUS:BPLAN_180#ABBREVIATION:glpF# proteins: NAME:MIP channel, glycerol diffusion#ABBREVIATION:GlpF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_180)
fast: false
reversible: true
name: Glyceraldehyde facilitated diffusion

542554
type: LocalParameter
value: 0.0

542552
type: LocalParameter
value: 0.0

542551
type: LocalParameter
value: 999999.0

542549
type: LocalParameter
value: -999999.0

742029
type: SpeciesReference
stoichiometry: 1.0
species: 539764

742017
type: SpeciesReference
stoichiometry: 1.0
species: 539766

540916
type: Reaction
reactant: 745623
product: 745659
reactant: 745635
kinetic law: 745671
product: 745647
name: methionine synthase
reversible: true
notes: Abbreviation: R_METS Synonyms: _0 EC Number: 2.1.1.14 SUBSYSTEM: Methionine Metabolism Equation: [c] : 5mthf + hcys-L <==> met-L + thf Confidence Level: 2 genes: LOCUS:BPLAN_521#ABBREVIATION:metE#ECNUMBERS:2.1.1.14# proteins: NAME:Cobalamin independent methionine synthase#ABBREVIATION:MetE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_521)
fast: false

745623
type: SpeciesReference
stoichiometry: 1.0
species: 539576

745659
type: SpeciesReference
stoichiometry: 1.0
species: 540083

745635
type: SpeciesReference
stoichiometry: 1.0
species: 539787

542870
type: LocalParameter
value: 0.0

542868
type: LocalParameter
value: 0.0

542867
type: LocalParameter
value: 999999.0

542865
type: LocalParameter
value: -999999.0

745647
type: SpeciesReference
stoichiometry: 1.0
species: 539945

541345
type: Reaction
name: transketolase
kinetic law: 755125
product: 755113
product: 755101
reactant: 755089
fast: false
reversible: true
reactant: 755077
notes: Abbreviation: R_TKT1 Synonyms: _0 EC Number: 2.2.1.1 SUBSYSTEM: Pentose Phosphate Pathway Equation: [c] : r5p + xu5p-D <==> g3p + s7p Confidence Level: 2 SMP Two reactions for transketolase: TKT1 and TKT2 genes: LOCUS:BPLAN_239#ABBREVIATION:tkt#ECNUMBERS:2.2.1.1# LOCUS:BPLAN_238#ABBREVIATION:tkt#ECNUMBERS:2.2.1.1# proteins: NAME:transketolase N-terminal subunit#ABBREVIATION:Tkt# NAME:transketolase C-terminal subunit#ABBREVIATION:Tkt# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_239 and BPLAN_238)

543857
type: LocalParameter
value: 0.0

543855
type: LocalParameter
value: 0.0

543853
type: LocalParameter
value: 999999.0

543851
type: LocalParameter
value: -999999.0

755113
type: SpeciesReference
stoichiometry: 1.0
species: 540050

755101
type: SpeciesReference
stoichiometry: 1.0
species: 539749

755089
type: SpeciesReference
stoichiometry: 1.0
species: 540127

755077
type: SpeciesReference
stoichiometry: 1.0
species: 540041

540841
type: Reaction
product: 743855
product: 743843
reversible: false
name: L-isoleucine transport via ABC system
product: 743819
notes: Abbreviation: R_ILEabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + h2o[c] + ile-L[e] --> adp[c] + h[c] + ile-L[c] + pi[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
kinetic law: 743868
product: 743831
reactant: 743806
reactant: 743794
reactant: 743782
fast: false

743855
type: SpeciesReference
stoichiometry: 1.0
species: 540013

743843
type: SpeciesReference
stoichiometry: 1.0
species: 539914

743819
type: SpeciesReference
stoichiometry: 1.0
species: 539611

542719
type: LocalParameter
value: 0.0

542717
type: LocalParameter
value: 0.0

542715
type: LocalParameter
value: 999999.0

542713
type: LocalParameter
value: 0.0

743831
type: SpeciesReference
stoichiometry: 1.0
species: 539783

743806
type: SpeciesReference
stoichiometry: 1.0
species: 539917

743794
type: SpeciesReference
stoichiometry: 1.0
species: 539779

743782
type: SpeciesReference
stoichiometry: 1.0
species: 539659

540135
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Aspartate_C4H6NO4

541390
type: Reaction
reactant: 756042
reactant: 756030
name: UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate synthetase
reactant: 756018
notes: Abbreviation: R_UAAGDS Synonyms: _0 EC Number: 6.3.2.13 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : 26dap-M + atp + uamag --> adp + h + pi + ugmd Confidence Level: 2 genes: LOCUS:BPLAN_252#ABBREVIATION:murE#ECNUMBERS:6.3.2.13# proteins: NAME:UDP-N-acetylmuramoxylalanyl-D-glutamate 2,6-diaminopimelate ligase#ABBREVIATION:MurE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_252)
fast: false
reversible: false
kinetic law: 756103
product: 756078
product: 756054
product: 756066
product: 756091

756042
type: SpeciesReference
stoichiometry: 1.0
species: 540106

756030
type: SpeciesReference
stoichiometry: 1.0
species: 539659

756018
type: SpeciesReference
stoichiometry: 1.0
species: 539496

543962
type: LocalParameter
value: 0.0

543960
type: LocalParameter
value: 0.0

543958
type: LocalParameter
value: 999999.0

543956
type: LocalParameter
value: 0.0

756078
type: SpeciesReference
stoichiometry: 1.0
species: 540013

756054
type: SpeciesReference
stoichiometry: 1.0
species: 539611

756066
type: SpeciesReference
stoichiometry: 1.0
species: 539783

756091
type: SpeciesReference
stoichiometry: 1.0
species: 540112

540511
type: Reaction
fast: false
reactant: 737913
notes: Abbreviation: R_DMATT Synonyms: _0 EC Number: 2.5.1.1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : dmpp + ipdp --> grdp + ppi Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
reversible: false
name: dimethylallyltranstransferase
product: 737952
kinetic law: 737965
reactant: 737926
product: 737939

737913
type: SpeciesReference
stoichiometry: 1.0
species: 539715

539715
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: Dimethylallyl diphosphate_C5H9O7P2

737952
type: SpeciesReference
stoichiometry: 1.0
species: 540021

542056
type: LocalParameter
value: 0.0

542055
type: LocalParameter
value: 0.0

542053
type: LocalParameter
value: 999999.0

542052
type: LocalParameter
value: 0.0

737926
type: SpeciesReference
stoichiometry: 1.0
species: 539926

737939
type: SpeciesReference
stoichiometry: 1.0
species: 539773

540151
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: H2O_H2O

541255
type: Reaction
kinetic law: 753156
product: 753144
product: 753132
reactant: 753120
notes: Abbreviation: R_RBFSb Synonyms: _0 EC Number: 2.5.1.9 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : (2) dmlz --> 4r5au + ribflv Confidence Level: 2 genes: LOCUS:BPLAN_094#ABBREVIATION:ribE#ECNUMBERS:2.5.1.9# proteins: NAME:riboflavin synthase#ABBREVIATION:RibH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_094)
fast: false
reversible: false
name: riboflavin synthase

543647
type: LocalParameter
value: 0.0

543645
type: LocalParameter
value: 0.0

543643
type: LocalParameter
value: 999999.0

543641
type: LocalParameter
value: 0.0

753144
type: SpeciesReference
stoichiometry: 1.0
species: 540044

753132
type: SpeciesReference
stoichiometry: 1.0
species: 539560

539560
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _4-(1-D-Ribitylamino)-5-aminouracil_C9H16N4O6

753120
type: SpeciesReference
stoichiometry: 2.0
species: 539714

540901
type: Reaction
reactant: 745249
reversible: false
fast: false
product: 745261
notes: Abbreviation: R_MCOATA Synonyms: _2 EC Number: 2.3.1.39 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : ACP + malcoa --> coa + malACP Confidence Level: 2 tv genes: LOCUS:BPLAN_103#ABBREVIATION:fabD#ECNUMBERS:2.3.1.39# proteins: NAME:Malonyl coenzyme A-acyl carrier protein transacylase#ABBREVIATION:FabD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_103)
kinetic law: 745285
reactant: 745237
name: Malonyl-CoA-ACP transacylase
product: 745273

745249
type: SpeciesReference
stoichiometry: 1.0
species: 539944

745261
type: SpeciesReference
stoichiometry: 1.0
species: 539677

542840
type: LocalParameter
value: 0.0

542838
type: LocalParameter
value: 0.0

542837
type: LocalParameter
value: 999999.0

542835
type: LocalParameter
value: 0.0

745237
type: SpeciesReference
stoichiometry: 1.0
species: 539601

745273
type: SpeciesReference
stoichiometry: 1.0
species: 539939

539510
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Isopropylmaleate_C7H8O4

540313
type: Reaction
reversible: true
reactant: 732671
product: 732696
reactant: 732659
name: L-alanine transaminase
kinetic law: 732708
fast: false
product: 732684
notes: Abbreviation: R_ALATA_L Synonyms: _0 EC Number: 2.6.1.2 SUBSYSTEM: Glutamate metabolism Equation: [c] : akg + ala-L <==> glu-L + pyr Confidence Level: 2 genes: LOCUS:BPLAN_185#ABBREVIATION:ilvE#ECNUMBERS:2.6.1.42,-!-,2.6.1.2# proteins: NAME:Branched-chain-amino-acid aminotransferase#ABBREVIATION:IlvE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_185)

732671
type: SpeciesReference
stoichiometry: 1.0
species: 539628

732696
type: SpeciesReference
stoichiometry: 1.0
species: 540038

732659
type: SpeciesReference
stoichiometry: 1.0
species: 539622

541670
type: LocalParameter
value: 0.0

541669
type: LocalParameter
value: 0.0

541667
type: LocalParameter
value: 999999.0

541666
type: LocalParameter
value: -999999.0

732684
type: SpeciesReference
stoichiometry: 1.0
species: 539760

540676
type: Reaction
kinetic law: 740321
product: 740309
reactant: 740297
notes: Abbreviation: R_EX_trp_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : trp-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Tryptophan exchange

542386
type: LocalParameter
value: 0.0

542385
type: LocalParameter
value: 0.0

542383
type: LocalParameter
value: 999999.0

542382
type: LocalParameter
value: 0.0

740309
type: SpeciesReference
stoichiometry: 1.0
species: 540204

740297
type: SpeciesReference
stoichiometry: 1.0
species: 540095

540490
type: Reaction
kinetic law: 737559
product: 737547
product: 737535
reactant: 737523
notes: Abbreviation: R_DHNPA2 Synonyms: _1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : dhnpt <==> 6hmhpt + gcald Confidence Level: 2 JLR- similar to DHNPA except the 'pterin product is different genes: LOCUS:BPLAN_348#ABBREVIATION:folB#ECNUMBERS:4.1.2.25# proteins: NAME:dihydroneopterin aldolase#ABBREVIATION:FolB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_348)
fast: false
reversible: true
name: dihydroneopterin aldolase

542014
type: LocalParameter
value: 0.0

542013
type: LocalParameter
value: 0.0

542011
type: LocalParameter
value: 999999.0

542010
type: LocalParameter
value: -999999.0

737547
type: SpeciesReference
stoichiometry: 1.0
species: 539753

737535
type: SpeciesReference
stoichiometry: 1.0
species: 539580

737523
type: SpeciesReference
stoichiometry: 1.0
species: 539707

541009
type: Reaction
reversible: false
fast: false
product: 747692
name: _5'-nucleotidase (IMP)
reactant: 747668
reactant: 747680
notes: Abbreviation: R_NTD11 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : h2o + imp --> ins + pi Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 747704
kinetic law: 747716

747692
type: SpeciesReference
stoichiometry: 1.0
species: 539924

747668
type: SpeciesReference
stoichiometry: 1.0
species: 539779

747680
type: SpeciesReference
stoichiometry: 1.0
species: 539920

747704
type: SpeciesReference
stoichiometry: 1.0
species: 540013

543073
type: LocalParameter
value: 0.0

543071
type: LocalParameter
value: 0.0

543069
type: LocalParameter
value: 999999.0

543067
type: LocalParameter
value: 0.0

540595
type: Reaction
kinetic law: 739341
product: 739329
reactant: 739317
notes: Abbreviation: R_EX_glyald_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : glyald <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: D-Glyceraldehyde exchange

542224
type: LocalParameter
value: 0.0

542223
type: LocalParameter
value: 0.0

542221
type: LocalParameter
value: 999999.0

542220
type: LocalParameter
value: 0.0

739329
type: SpeciesReference
stoichiometry: 1.0
species: 540147

739317
type: SpeciesReference
stoichiometry: 1.0
species: 539766

540223
type: Reaction
product: 730753
reactant: 730705
fast: false
kinetic law: 730765
reactant: 730717
notes: Abbreviation: R_ACGS Synonyms: _0 EC Number: 2.3.1.1 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : accoa + glu-L --> acglu + coa + h Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
name: N-acetylglutamate synthase
reversible: false
product: 730741
product: 730729

730753
type: SpeciesReference
stoichiometry: 1.0
species: 539783

730705
type: SpeciesReference
stoichiometry: 1.0
species: 539590

541494
type: LocalParameter
value: 0.0

541492
type: LocalParameter
value: 0.0

541489
type: LocalParameter
value: 999999.0

541486
type: LocalParameter
value: 0.0

730717
type: SpeciesReference
stoichiometry: 1.0
species: 539760

730741
type: SpeciesReference
stoichiometry: 1.0
species: 539677

730729
type: SpeciesReference
stoichiometry: 1.0
species: 539597

540238
type: Reaction
notes: Abbreviation: R_ACOTA Synonyms: _0 EC Number: 2.6.1.11 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : acorn + akg <==> acg5sa + glu-L Confidence Level: 2 genes: LOCUS:BPLAN_325#ABBREVIATION:argD#ECNUMBERS:2.6.1.11,-!-,2.6.1.17# LOCUS:BPLAN_012#ABBREVIATION:argD#ECNUMBERS:2.6.1.11,-!-,2.6.1.17# proteins: NAME:acetylornithine transaminase#ABBREVIATION:ArgD# NAME:acetylornithine transaminase#ABBREVIATION:ArgD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_325) or (BPLAN_012)
reversible: true
name: acetylornithine transaminase
fast: false
product: 731067
reactant: 731043
reactant: 731030
product: 731055
kinetic law: 731079

731067
type: SpeciesReference
stoichiometry: 1.0
species: 539760

731043
type: SpeciesReference
stoichiometry: 1.0
species: 539622

731030
type: SpeciesReference
stoichiometry: 1.0
species: 539599

731055
type: SpeciesReference
stoichiometry: 1.0
species: 539593

541523
type: LocalParameter
value: 0.0

541522
type: LocalParameter
value: 0.0

541520
type: LocalParameter
value: 999999.0

541519
type: LocalParameter
value: -999999.0

540775
type: Reaction
kinetic law: 742343
product: 742331
reactant: 742319
notes: Abbreviation: R_GLYt Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: gly[e] <==> gly[c] Confidence Level: 2 NCD genes: LOCUS:BPLAN_180#ABBREVIATION:glpF# proteins: NAME:MIP channel, glycerol diffusion#ABBREVIATION:GlpF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_180)
fast: false
reversible: true
name: Glycine transport via diffusion

542584
type: LocalParameter
value: 0.0

542582
type: LocalParameter
value: 0.0

542581
type: LocalParameter
value: 999999.0

542579
type: LocalParameter
value: -999999.0

742331
type: SpeciesReference
stoichiometry: 1.0
species: 539762

742319
type: SpeciesReference
stoichiometry: 1.0
species: 539763

540388
type: Reaction
product: 735211
reactant: 735151
reactant: 735139
kinetic law: 735247
product: 735199
product: 735223
reversible: false
name: Fatty acid biosynthesis (n-C18:1)
product: 735235
reactant: 735163
notes: Abbreviation: R_C181SN Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : actACP + (22) h + (7) malACP + (15) nadph --> (7) ACP + (7) co2 + (8) h2o + (15) nadp + octeACP Confidence Level: 2 tv genes: LOCUS:BPLAN_596#ABBREVIATION:fabZ#ECNUMBERS:4.2.1.-# LOCUS:none#ABBREVIATION:fabA#ECNUMBERS:4.2.1.60# LOCUS:BPLAN_294#ABBREVIATION:fabI#ECNUMBERS:1.3.1.9# LOCUS:BPLAN_576#ABBREVIATION:fabG#ECNUMBERS:1.1.1.100# LOCUS:BPLAN_555#ABBREVIATION:fabF#ECNUMBERS:2.3.1.41# LOCUS:BPLAN_524#ABBREVIATION:fabH#ECNUMBERS:2.3.1.41# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase#ABBREVIATION:FabH# NAME:_3-oxoacyl-[acyl-carrier-protein] synthase II#ABBREVIATION:FabF# NAME:_3-oxoacyl-ACP reductase#ABBREVIATION:FabG# NAME:Enoyl-(acyl-carrier-protein) reductase (NADH)#ABBREVIATION:FabI# NAME:beta-hydroxydecanoyl thioester dehydrase#ABBREVIATION:FabA# NAME:(3R)-hydroxymyriostoyl-(acyl carrier protein) dehydratase#ABBREVIATION:FabZ# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_596 and BPLAN_555) or (BPLAN_524 and BPLAN_576) and (BPLAN_294)
product: 735187
reactant: 735175
fast: false

735211
type: SpeciesReference
stoichiometry: 8.0
species: 539779

735151
type: SpeciesReference
stoichiometry: 22.0
species: 539783

735139
type: SpeciesReference
stoichiometry: 1.0
species: 539605

541820
type: LocalParameter
value: 0.0

541819
type: LocalParameter
value: 0.0

541817
type: LocalParameter
value: 999999.0

541816
type: LocalParameter
value: 0.0

735199
type: SpeciesReference
stoichiometry: 7.0
species: 539673

735223
type: SpeciesReference
stoichiometry: 15.0
species: 539967

735235
type: SpeciesReference
stoichiometry: 1.0
species: 539988

735163
type: SpeciesReference
stoichiometry: 7.0
species: 539939

735187
type: SpeciesReference
stoichiometry: 7.0
species: 539601

735175
type: SpeciesReference
stoichiometry: 15.0
species: 539969

540661
type: Reaction
kinetic law: 740141
product: 740129
reactant: 740117
notes: Abbreviation: R_EX_pyr_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : pyr <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Pyruvate exchange

542356
type: LocalParameter
value: 0.0

542355
type: LocalParameter
value: 0.0

542353
type: LocalParameter
value: 999999.0

542352
type: LocalParameter
value: 0.0

740129
type: SpeciesReference
stoichiometry: 1.0
species: 540189

740117
type: SpeciesReference
stoichiometry: 1.0
species: 540039

540850
type: Reaction
product: 744038
product: 744050
kinetic law: 744062
reactant: 743990
reversible: false
fast: false
product: 744026
reactant: 744002
reactant: 744014
name: IMP dehydrogenase
notes: Abbreviation: R_IMPD Synonyms: _0 EC Number: 1.1.1.205 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : h2o + imp + nad --> h + nadh + xmp Confidence Level: 2 genes: LOCUS:BPLAN_474#ABBREVIATION:guaB#ECNUMBERS:1.1.1.205# proteins: NAME:Inosine-5'-monophosphate dehydrogenase#ABBREVIATION:GuaB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_474)

744038
type: SpeciesReference
stoichiometry: 1.0
species: 539966

744050
type: SpeciesReference
stoichiometry: 1.0
species: 540125

542738
type: LocalParameter
value: 0.0

542736
type: LocalParameter
value: 0.0

542735
type: LocalParameter
value: 999999.0

542733
type: LocalParameter
value: 0.0

743990
type: SpeciesReference
stoichiometry: 1.0
species: 539779

744026
type: SpeciesReference
stoichiometry: 1.0
species: 539783

744002
type: SpeciesReference
stoichiometry: 1.0
species: 539920

744014
type: SpeciesReference
stoichiometry: 1.0
species: 539964

540604
type: Reaction
kinetic law: 739450
product: 739438
reactant: 739426
notes: Abbreviation: R_EX_h2o_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : h2o <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: H2O exchange

542242
type: LocalParameter
value: 0.0

542241
type: LocalParameter
value: 0.0

542239
type: LocalParameter
value: 999999.0

542238
type: LocalParameter
value: -999999.0

739438
type: SpeciesReference
stoichiometry: 1.0
species: 540151

739426
type: SpeciesReference
stoichiometry: 1.0
species: 539780

540463
type: Reaction
notes: Abbreviation: R_DDPA Synonyms: _0 EC Number: 2.5.1.54 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : e4p + h2o + pep --> 2dda7p + pi Confidence Level: 2 genes: LOCUS:BPLAN_296#ABBREVIATION:aroGpheA#ECNUMBERS:2.5.1.54,-!-,4.2.1.51,-!-,5.4.99.5# proteins: NAME:_bifunctional putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase#ABBREVIATION:AroGPheA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_296)
fast: false
reversible: false
product: 736942
product: 736955
kinetic law: 736967
reactant: 736930
reactant: 736917
name: _3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase
reactant: 736905

736942
type: SpeciesReference
stoichiometry: 1.0
species: 539502

539502
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate_C7H10O10P

736955
type: SpeciesReference
stoichiometry: 1.0
species: 540013

541965
type: LocalParameter
value: 0.0

541963
type: LocalParameter
value: 0.0

541962
type: LocalParameter
value: 999999.0

541960
type: LocalParameter
value: 0.0

736930
type: SpeciesReference
stoichiometry: 1.0
species: 540005

736917
type: SpeciesReference
stoichiometry: 1.0
species: 539779

736905
type: SpeciesReference
stoichiometry: 1.0
species: 539727

541348
type: Reaction
product: 755161
product: 755173
reversible: true
reactant: 755137
reactant: 755149
kinetic law: 755185
fast: false
notes: Abbreviation: R_TKT2 Synonyms: _0 EC Number: 2.2.1.1 SUBSYSTEM: Pentose Phosphate Pathway Equation: [c] : e4p + xu5p-D <==> f6p + g3p Confidence Level: 2 SMP Two reactions for transketolase: TKT1 and TKT2 genes: LOCUS:BPLAN_239#ABBREVIATION:tkt#ECNUMBERS:2.2.1.1# LOCUS:BPLAN_238#ABBREVIATION:tkt#ECNUMBERS:2.2.1.1# proteins: NAME:transketolase N-terminal subunit#ABBREVIATION:Tkt# NAME:transketolase C-terminal subunit#ABBREVIATION:Tkt# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_239 and BPLAN_238)
name: transketolase

755161
type: SpeciesReference
stoichiometry: 1.0
species: 539730

755173
type: SpeciesReference
stoichiometry: 1.0
species: 539749

755137
type: SpeciesReference
stoichiometry: 1.0
species: 539727

755149
type: SpeciesReference
stoichiometry: 1.0
species: 540127

543864
type: LocalParameter
value: 0.0

543862
type: LocalParameter
value: 0.0

543860
type: LocalParameter
value: 999999.0

543858
type: LocalParameter
value: -999999.0

540529
type: Reaction
reactant: 738339
product: 738375
name: deoxyuridine kinase (ATP:Deoxyuridine)
reversible: false
reactant: 738327
product: 738351
kinetic law: 738387
notes: Abbreviation: R_DURIK1 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + duri --> adp + dump + h Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
product: 738363

738339
type: SpeciesReference
stoichiometry: 1.0
species: 539724

738375
type: SpeciesReference
stoichiometry: 1.0
species: 539783

738327
type: SpeciesReference
stoichiometry: 1.0
species: 539659

738351
type: SpeciesReference
stoichiometry: 1.0
species: 539611

542092
type: LocalParameter
value: 0.0

542091
type: LocalParameter
value: 0.0

542089
type: LocalParameter
value: 999999.0

542088
type: LocalParameter
value: 0.0

738363
type: SpeciesReference
stoichiometry: 1.0
species: 539722

541264
type: Reaction
reversible: false
kinetic law: 753372
reactant: 753312
notes: Abbreviation: R_RNDR3 Synonyms: _0 EC Number: 1.17.4.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : cdp + trdrd --> dcdp + h2o + trdox Confidence Level: 2 genes: LOCUS:BPLAN_330#ABBREVIATION:nrdE#ECNUMBERS:1.17.4.1# LOCUS:BPLAN_p004#ABBREVIATION:nrdF#ECNUMBERS:1.17.4.1# proteins: NAME:Ribonucleoside diphosphate reductase subunit alpha#ABBREVIATION:NrdE# NAME:ribonucleotide-diphosphate reductase beta subunit#ABBREVIATION:NrdE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_330 and BPLAN_p004)
name: ribonucleoside-diphosphate reductase (CDP)
reactant: 753324
product: 753336
product: 753348
fast: false
product: 753360

543668
type: LocalParameter
value: 0.0

543666
type: LocalParameter
value: 0.0

543664
type: LocalParameter
value: 999999.0

543662
type: LocalParameter
value: 0.0

753312
type: SpeciesReference
stoichiometry: 1.0
species: 539663

753324
type: SpeciesReference
stoichiometry: 1.0
species: 540093

753336
type: SpeciesReference
stoichiometry: 1.0
species: 539693

753348
type: SpeciesReference
stoichiometry: 1.0
species: 539779

753360
type: SpeciesReference
stoichiometry: 1.0
species: 540092

541018
type: Reaction
name: _5'-nucleotidase (CMP)
reactant: 747860
kinetic law: 747896
notes: Abbreviation: R_NTD4 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : cmp + h2o --> cytd + pi Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 747884
product: 747872
reversible: false
reactant: 747848
fast: false

747860
type: SpeciesReference
stoichiometry: 1.0
species: 539779

543094
type: LocalParameter
value: 0.0

543092
type: LocalParameter
value: 0.0

543090
type: LocalParameter
value: 999999.0

543088
type: LocalParameter
value: 0.0

747884
type: SpeciesReference
stoichiometry: 1.0
species: 540013

747872
type: SpeciesReference
stoichiometry: 1.0
species: 539685

747848
type: SpeciesReference
stoichiometry: 1.0
species: 539671

540514
type: Reaction
reactant: 737978
name: Dihydroneopterin monophosphate dephosphorylase
product: 738003
product: 738015
reversible: false
kinetic law: 738027
fast: false
reactant: 737991
notes: Abbreviation: R_DNMPPA Synonyms: _1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : dhpmp + h2o --> dhnpt + pi Confidence Level: 1 JLR- Neidhardt page 667 genes: none proteins: none citations: none GENE ASSOCIATION:

737978
type: SpeciesReference
stoichiometry: 1.0
species: 539710

738003
type: SpeciesReference
stoichiometry: 1.0
species: 539707

738015
type: SpeciesReference
stoichiometry: 1.0
species: 540013

542062
type: LocalParameter
value: 0.0

542061
type: LocalParameter
value: 0.0

542059
type: LocalParameter
value: 999999.0

542058
type: LocalParameter
value: 0.0

737991
type: SpeciesReference
stoichiometry: 1.0
species: 539779

540703
type: Reaction
notes: Abbreviation: R_FOMETR Synonyms: _0 EC Number: 2.1.2.10 SUBSYSTEM: Cofactor Metabolism Equation: [c] : 5fthf + h <==> h2o + methf Confidence Level: 2 RM genes: LOCUS:BPLAN_447#ABBREVIATION:gcvT#ECNUMBERS:2.1.2.10# proteins: NAME:Glycine cleavage complex, T#ABBREVIATION:GcvT# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_447)
kinetic law: 740815
fast: false
reactant: 740767
product: 740791
name: aminomethyltransferase
product: 740803
reversible: true
reactant: 740779

542440
type: LocalParameter
value: 0.0

542439
type: LocalParameter
value: 0.0

542437
type: LocalParameter
value: 999999.0

542436
type: LocalParameter
value: -999999.0

740767
type: SpeciesReference
stoichiometry: 1.0
species: 539574

740791
type: SpeciesReference
stoichiometry: 1.0
species: 539779

740803
type: SpeciesReference
stoichiometry: 1.0
species: 539948

740779
type: SpeciesReference
stoichiometry: 1.0
species: 539783

540868
type: Reaction
product: 744401
product: 744413
reactant: 744376
reactant: 744388
fast: false
notes: Abbreviation: R_KARA1i Synonyms: _0 EC Number: 1.1.1.86 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : alac-S + h + nadph --> 23dhmb + nadp Confidence Level: 2 used to be named AHAI; renamed for consistency; irreversible form of KARA1i - NCD genes: LOCUS:BPLAN_086#ABBREVIATION:ilvC#ECNUMBERS:1.1.1.86# proteins: NAME:acetohydroxy acid isomeroreductase#ABBREVIATION:IlvC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_086)
name: acetohydroxy acid isomeroreductase
reversible: false
kinetic law: 744425
reactant: 744364

744401
type: SpeciesReference
stoichiometry: 1.0
species: 539486

744413
type: SpeciesReference
stoichiometry: 1.0
species: 539967

744376
type: SpeciesReference
stoichiometry: 1.0
species: 539783

744388
type: SpeciesReference
stoichiometry: 1.0
species: 539969

542774
type: LocalParameter
value: 0.0

542772
type: LocalParameter
value: 0.0

542771
type: LocalParameter
value: 999999.0

542769
type: LocalParameter
value: 0.0

744364
type: SpeciesReference
stoichiometry: 1.0
species: 539634

539634
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: (S)-2-Acetolactate_C5H7O4

541063
type: Reaction
product: 748889
notes: Abbreviation: R_NTPTP2 Synonyms: _0 EC Number: 3.1.5.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : gtp + h2o --> gsn + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_029#ABBREVIATION:dgt#ECNUMBERS:3.1.5.1# proteins: NAME:putative transmembrane HD family protein#ABBREVIATION:Dgt# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_029)
fast: false
name: Nucleoside triphosphate tripolyhydrolase
kinetic law: 748901
reversible: false
reactant: 748852
reactant: 748865
product: 748877

748889
type: SpeciesReference
stoichiometry: 1.0
species: 540021

543199
type: LocalParameter
value: 0.0

543197
type: LocalParameter
value: 0.0

543195
type: LocalParameter
value: 999999.0

543193
type: LocalParameter
value: 0.0

748852
type: SpeciesReference
stoichiometry: 1.0
species: 539776

748865
type: SpeciesReference
stoichiometry: 1.0
species: 539779

748877
type: SpeciesReference
stoichiometry: 1.0
species: 539774

540316
type: Reaction
reactant: 732732
notes: Abbreviation: R_ALATA_L2 Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : ala-L + pydx5p --> pyam5p + pyr Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
product: 732756
fast: false
name: alanine transaminase
kinetic law: 732768
product: 732744
reversible: false
reactant: 732720

732732
type: SpeciesReference
stoichiometry: 1.0
species: 540036

732756
type: SpeciesReference
stoichiometry: 1.0
species: 540038

541676
type: LocalParameter
value: 0.0

541675
type: LocalParameter
value: 0.0

541673
type: LocalParameter
value: 999999.0

541672
type: LocalParameter
value: 0.0

732744
type: SpeciesReference
stoichiometry: 1.0
species: 540035

732720
type: SpeciesReference
stoichiometry: 1.0
species: 539628

540718
type: Reaction
product: 741046
kinetic law: 741070
reactant: 741022
fast: false
reactant: 741034
notes: Abbreviation: R_FUMt2_2 Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: fum[e] + (2) h[e] --> fum[c] + (2) h[c] Confidence Level: 2 JLR genes: LOCUS:BPLAN_282#ABBREVIATION:dctA# proteins: NAME:C4-dicarboxylate transporter#ABBREVIATION:DctA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_282)
reversible: false
name: Fumarate transport via proton symport (2 H)
product: 741058

741046
type: SpeciesReference
stoichiometry: 1.0
species: 539747

542470
type: LocalParameter
value: 0.0

542469
type: LocalParameter
value: 0.0

542467
type: LocalParameter
value: 999999.0

542466
type: LocalParameter
value: 0.0

741022
type: SpeciesReference
stoichiometry: 1.0
species: 539748

741034
type: SpeciesReference
stoichiometry: 2.0
species: 539784

741058
type: SpeciesReference
stoichiometry: 2.0
species: 539783

540292
type: Reaction
product: 732225
reversible: false
notes: Abbreviation: R_AIRC2 Synonyms: _0 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : air + atp + hco3 --> 5caiz + adp + h + pi Confidence Level: 1 JLR- reaction according to Neidhardt pg 563 and 569. According to Meyer et al. Biochemistry 38: 3012-3018pp, this pathway is used in prokaryotes and uses hco3 instead of co2 genes: none proteins: none citations: none GENE ASSOCIATION:
name: phosphoribosylaminoimidazole carboxylase
product: 732237
reactant: 732201
product: 732261
reactant: 732213
reactant: 732189
product: 732249
kinetic law: 732273
fast: false

732225
type: SpeciesReference
stoichiometry: 1.0
species: 539568

732237
type: SpeciesReference
stoichiometry: 1.0
species: 539611

732201
type: SpeciesReference
stoichiometry: 1.0
species: 539659

732261
type: SpeciesReference
stoichiometry: 1.0
species: 540013

732213
type: SpeciesReference
stoichiometry: 1.0
species: 539785

732189
type: SpeciesReference
stoichiometry: 1.0
species: 539620

732249
type: SpeciesReference
stoichiometry: 1.0
species: 539783

541628
type: LocalParameter
value: 0.0

541627
type: LocalParameter
value: 0.0

541625
type: LocalParameter
value: 999999.0

541624
type: LocalParameter
value: 0.0

540397
type: Reaction
kinetic law: 735453
product: 735441
reactant: 735429
notes: Abbreviation: R_CHORM Synonyms: _0 EC Number: 5.4.99.5 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : chor <==> pphn Confidence Level: 2 genes: LOCUS:BPLAN_299#ABBREVIATION:pheA#ECNUMBERS:5.4.99.5,-!-,4.2.1.51# LOCUS:BPLAN_297#ABBREVIATION:tyrA#ECNUMBERS:5.4.99.5,-!-,1.3.1.12# LOCUS:BPLAN_296#ABBREVIATION:aroGpheA#ECNUMBERS:2.5.1.54,-!-,4.2.1.51,-!-,5.4.99.5# proteins: NAME:_bifunctional putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase#ABBREVIATION:AroGPheA# NAME:Chorismate mutase T#ABBREVIATION:TyrA# NAME:Chorismate mutase P#ABBREVIATION:PheA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_297) or (BPLAN_299) or (BPLAN_296)
fast: false
reversible: true
name: chorismate mutase

541838
type: LocalParameter
value: 0.0

541837
type: LocalParameter
value: 0.0

541835
type: LocalParameter
value: 999999.0

541834
type: LocalParameter
value: -999999.0

735441
type: SpeciesReference
stoichiometry: 1.0
species: 540019

735429
type: SpeciesReference
stoichiometry: 1.0
species: 539667

540679
type: Reaction
kinetic law: 740357
product: 740345
reactant: 740333
notes: Abbreviation: R_EX_tyr_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : tyr-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Tyrosine exchange

542392
type: LocalParameter
value: 0.0

542391
type: LocalParameter
value: 0.0

542389
type: LocalParameter
value: 999999.0

542388
type: LocalParameter
value: 0.0

740345
type: SpeciesReference
stoichiometry: 1.0
species: 540207

540207
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: L-Tyrosine_C9H11NO3

740333
type: SpeciesReference
stoichiometry: 1.0
species: 540097

540808
type: Reaction
notes: Abbreviation: R_HISTP Synonyms: _0 EC Number: 3.1.3.15 SUBSYSTEM: Histidine Metabolism Equation: [c] : h2o + hisp --> histd + pi Confidence Level: 2 genes: LOCUS:BPLAN_204#ABBREVIATION:hisB#ECNUMBERS:3.1.3.15,-!-,4.2.1.19# proteins: NAME:Imidazoleglycerol phosphate dehydratase and Histidinol phosphatase#ABBREVIATION:HisB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_204)
reactant: 743086
reversible: false
reactant: 743074
product: 743111
name: histidinol-phosphatase
fast: false
kinetic law: 743123
product: 743099

743086
type: SpeciesReference
stoichiometry: 1.0
species: 539792

743074
type: SpeciesReference
stoichiometry: 1.0
species: 539779

743111
type: SpeciesReference
stoichiometry: 1.0
species: 540013

542650
type: LocalParameter
value: 0.0

542648
type: LocalParameter
value: 0.0

542647
type: LocalParameter
value: 999999.0

542645
type: LocalParameter
value: 0.0

743099
type: SpeciesReference
stoichiometry: 1.0
species: 539793

540493
type: Reaction
reactant: 737583
notes: Abbreviation: R_DHORD5 Synonyms: _0 EC Number: 1.3.3.1 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : dhor-S + mqn8 --> mql8 + orot Confidence Level: 2 JLR genes: LOCUS:BPLAN_127#ABBREVIATION:pyrD#ECNUMBERS:1.3.3.1# proteins: NAME:Dihydroorotate dehydrogenase#ABBREVIATION:PyrD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_127)
fast: false
reversible: false
name: dihydroorotic acid (menaquinone-8)
kinetic law: 737619
product: 737595
product: 737607
reactant: 737571

737583
type: SpeciesReference
stoichiometry: 1.0
species: 539955

542020
type: LocalParameter
value: 0.0

542019
type: LocalParameter
value: 0.0

542017
type: LocalParameter
value: 999999.0

542016
type: LocalParameter
value: 0.0

737595
type: SpeciesReference
stoichiometry: 1.0
species: 539953

737607
type: SpeciesReference
stoichiometry: 1.0
species: 539996

737571
type: SpeciesReference
stoichiometry: 1.0
species: 539708

540985
type: Reaction
reactant: 747196
product: 747232
notes: Abbreviation: R_NDPK8 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dadp <==> adp + datp Confidence Level: 2 Many nucleoside diphosphates (eight described) can act as acceptors. While many ribo- and deoxyribonucleoside triphosphates can act as donors, only ATP is chosen as a donor to minimize the number of total reactions. genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)
kinetic law: 747244
reactant: 747208
reversible: true
fast: false
product: 747220
name: nucleoside-diphosphate kinase (ATP:dADP)

747196
type: SpeciesReference
stoichiometry: 1.0
species: 539659

747232
type: SpeciesReference
stoichiometry: 1.0
species: 539689

543018
type: LocalParameter
value: 0.0

543016
type: LocalParameter
value: 0.0

543014
type: LocalParameter
value: 999999.0

543012
type: LocalParameter
value: -999999.0

747208
type: SpeciesReference
stoichiometry: 1.0
species: 539687

747220
type: SpeciesReference
stoichiometry: 1.0
species: 539611

541003
type: Reaction
name: _5'-nucleotidase (dUMP)
reactant: 747560
fast: false
product: 747584
kinetic law: 747596
product: 747572
reactant: 747548
reversible: false
notes: Abbreviation: R_NTD1 Synonyms: _0 EC Number: 3.1.3.5 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dump + h2o --> duri + pi Confidence Level: 1 Wide specificity for 5'-nucleotides Also see EC 3.1.3.31 genes: none proteins: none citations: none GENE ASSOCIATION:

747560
type: SpeciesReference
stoichiometry: 1.0
species: 539779

747584
type: SpeciesReference
stoichiometry: 1.0
species: 540013

543059
type: LocalParameter
value: 0.0

543057
type: LocalParameter
value: 0.0

543055
type: LocalParameter
value: 999999.0

543053
type: LocalParameter
value: 0.0

747572
type: SpeciesReference
stoichiometry: 1.0
species: 539724

747548
type: SpeciesReference
stoichiometry: 1.0
species: 539722

540598
type: Reaction
kinetic law: 739378
product: 739365
reactant: 739353
notes: Abbreviation: R_EX_glyc_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : glyc <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Glycerol exchange

542230
type: LocalParameter
value: 0.0

542229
type: LocalParameter
value: 0.0

542227
type: LocalParameter
value: 999999.0

542226
type: LocalParameter
value: 0.0

739365
type: SpeciesReference
stoichiometry: 1.0
species: 540148

739353
type: SpeciesReference
stoichiometry: 1.0
species: 539769

539709
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: (S)-Dihydroorotate_C5H5N2O4

541168
type: Reaction
reactant: 751186
reversible: false
reactant: 751174
name: phosphoribosylglycinamide synthase
reactant: 751162
product: 751210
notes: Abbreviation: R_PRAGSr Synonyms: _1 EC Number: 6.3.4.13 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : atp + gly + pram --> adp + gar + h + pi Confidence Level: 2 JLR- added reversible form of PRAGS genes: LOCUS:BPLAN_160#ABBREVIATION:purD#ECNUMBERS:6.3.4.13# proteins: NAME:Phosphoribosylglycinamide synthetase#ABBREVIATION:PurD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_160)
product: 751198
fast: false
product: 751222
kinetic law: 751246
product: 751234

751186
type: SpeciesReference
stoichiometry: 1.0
species: 540022

751174
type: SpeciesReference
stoichiometry: 1.0
species: 539762

751162
type: SpeciesReference
stoichiometry: 1.0
species: 539659

751210
type: SpeciesReference
stoichiometry: 1.0
species: 539752

751198
type: SpeciesReference
stoichiometry: 1.0
species: 539611

751222
type: SpeciesReference
stoichiometry: 1.0
species: 539783

543444
type: LocalParameter
value: 0.0

543442
type: LocalParameter
value: 0.0

543440
type: LocalParameter
value: 999999.0

543438
type: LocalParameter
value: 0.0

751234
type: SpeciesReference
stoichiometry: 1.0
species: 540013

541252
type: Reaction
fast: false
reactant: 753047
kinetic law: 753108
reactant: 753059
product: 753096
reversible: false
notes: Abbreviation: R_RBFSa Synonyms: _0 EC Number: 2.5.1.9 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 4r5au + db4p --> dmlz + (2) h2o + pi Confidence Level: 2 genes: LOCUS:BPLAN_558#ABBREVIATION:ribC#ECNUMBERS:2.5.1.9# proteins: NAME:_6,7-dimethyl-8-ribityllumazine synthase#ABBREVIATION:RibC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_558)
product: 753072
name: riboflavin synthase
product: 753084

753047
type: SpeciesReference
stoichiometry: 1.0
species: 539560

543640
type: LocalParameter
value: 0.0

543638
type: LocalParameter
value: 0.0

543636
type: LocalParameter
value: 999999.0

543634
type: LocalParameter
value: 0.0

753059
type: SpeciesReference
stoichiometry: 1.0
species: 539690

539690
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539476
name: _3,4-dihydroxy-2-butanone 4-phosphate_C4H7O6P

753096
type: SpeciesReference
stoichiometry: 1.0
species: 540013

753072
type: SpeciesReference
stoichiometry: 1.0
species: 539714

753084
type: SpeciesReference
stoichiometry: 2.0
species: 539779

541357
type: Reaction
product: 755367
reactant: 755343
reactant: 755355
fast: false
kinetic law: 755391
name: thymidine phosphorylase
reversible: true
notes: Abbreviation: R_TMDPP Synonyms: _0 EC Number: 2.4.2.4 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : pi + thymd <==> 2dr1p + thym Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 755379

755367
type: SpeciesReference
stoichiometry: 1.0
species: 539508

755343
type: SpeciesReference
stoichiometry: 1.0
species: 540013

755355
type: SpeciesReference
stoichiometry: 1.0
species: 540091

543885
type: LocalParameter
value: 0.0

543883
type: LocalParameter
value: 0.0

543881
type: LocalParameter
value: 999999.0

543879
type: LocalParameter
value: -999999.0

755379
type: SpeciesReference
stoichiometry: 1.0
species: 540090

540970
type: Reaction
product: 746930
notes: Abbreviation: R_NDPK3 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + cdp <==> adp + ctp Confidence Level: 2 Many nucleoside diphosphates (eight described) can act as acceptors. While many ribo- and deoxyribonucleoside triphosphates can act as donors, only ATP is chosen as a donor to minimize the number of total reactions. genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)
reactant: 746905
reversible: true
product: 746918
fast: false
reactant: 746893
name: nucleoside-diphosphate kinase (ATP:CDP)
kinetic law: 746942

746930
type: SpeciesReference
stoichiometry: 1.0
species: 539681

746905
type: SpeciesReference
stoichiometry: 1.0
species: 539663

746918
type: SpeciesReference
stoichiometry: 1.0
species: 539611

746893
type: SpeciesReference
stoichiometry: 1.0
species: 539659

542985
type: LocalParameter
value: 0.0

542983
type: LocalParameter
value: 0.0

542981
type: LocalParameter
value: 999999.0

542979
type: LocalParameter
value: -999999.0

540853
type: Reaction
kinetic law: 744098
product: 744086
reactant: 744074
notes: Abbreviation: R_IPDDIi Synonyms: _0 EC Number: 5.3.3.2 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : ipdp <==> dmpp Confidence Level: 2 JLR- added irreversible form of IPDDI genes: LOCUS:BPLAN_445#ABBREVIATION:idi#ECNUMBERS:5.3.3.2# proteins: NAME:isopentenyl diphosphate isomerase#ABBREVIATION:Idi# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_445)
fast: false
reversible: true
name: isopentenyl-diphosphate D-isomerase

542744
type: LocalParameter
value: 0.0

542742
type: LocalParameter
value: 0.0

542741
type: LocalParameter
value: 999999.0

542739
type: LocalParameter
value: -999999.0

744086
type: SpeciesReference
stoichiometry: 1.0
species: 539715

744074
type: SpeciesReference
stoichiometry: 1.0
species: 539926

540232
type: Reaction
kinetic law: 730958
notes: Abbreviation: R_ACOATA Synonyms: _0 EC Number: 2.3.1.38 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : ACP + accoa --> acACP + coa Confidence Level: 2 tvrxn is now charge balanced; removed h - NCD genes: LOCUS:BPLAN_524#ABBREVIATION:fabH#ECNUMBERS:2.3.1.41# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase#ABBREVIATION:FabH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_524)
name: Acetyl-CoA ACP transacylase
reversible: false
reactant: 730922
product: 730946
product: 730934
fast: false
reactant: 730910

541512
type: LocalParameter
value: 0.0

541511
type: LocalParameter
value: 0.0

541509
type: LocalParameter
value: 999999.0

541508
type: LocalParameter
value: 0.0

730922
type: SpeciesReference
stoichiometry: 1.0
species: 539590

730946
type: SpeciesReference
stoichiometry: 1.0
species: 539677

730934
type: SpeciesReference
stoichiometry: 1.0
species: 539588

730910
type: SpeciesReference
stoichiometry: 1.0
species: 539601

541342
type: Reaction
product: 755053
name: threonine synthase
notes: Abbreviation: R_THRS Synonyms: _0 EC Number: 4.2.3.1 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : h2o + phom --> pi + thr-L Confidence Level: 2 genes: LOCUS:BPLAN_140#ABBREVIATION:thrC#ECNUMBERS:4.2.3.1# proteins: NAME:Threonine synthase#ABBREVIATION:ThrC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_140)
kinetic law: 755065
product: 755041
fast: false
reactant: 755029
reversible: false
reactant: 755017

755053
type: SpeciesReference
stoichiometry: 1.0
species: 540087

543850
type: LocalParameter
value: 0.0

543848
type: LocalParameter
value: 0.0

543846
type: LocalParameter
value: 999999.0

543844
type: LocalParameter
value: 0.0

755041
type: SpeciesReference
stoichiometry: 1.0
species: 540013

755029
type: SpeciesReference
stoichiometry: 1.0
species: 540010

755017
type: SpeciesReference
stoichiometry: 1.0
species: 539779

540523
type: Reaction
product: 738207
product: 738219
product: 738243
reversible: false
name: diphosphomevalonate decarboxylase
product: 738231
notes: Abbreviation: R_DPMVDx Synonyms: _0 EC Number: 4.1.1.33 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : 5dpmev + atp --> adp + co2 + ipdp + pi Confidence Level: 2 genes: LOCUS:BPLAN_283#ABBREVIATION:mvaD#ECNUMBERS:4.1.1.33# proteins: NAME:diphosphomevalonate decarboxylase#ABBREVIATION:MvaD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_283)
reactant: 738183
reactant: 738195
fast: false
kinetic law: 738255

738207
type: SpeciesReference
stoichiometry: 1.0
species: 539611

738219
type: SpeciesReference
stoichiometry: 1.0
species: 539673

738243
type: SpeciesReference
stoichiometry: 1.0
species: 540013

738231
type: SpeciesReference
stoichiometry: 1.0
species: 539926

738183
type: SpeciesReference
stoichiometry: 1.0
species: 539570

738195
type: SpeciesReference
stoichiometry: 1.0
species: 539659

542080
type: LocalParameter
value: 0.0

542079
type: LocalParameter
value: 0.0

542077
type: LocalParameter
value: 999999.0

542076
type: LocalParameter
value: 0.0

540508
type: Reaction
kinetic law: 737900
product: 737887
product: 737874
reactant: 737861
notes: Abbreviation: R_DHQS Synonyms: _0 EC Number: 4.2.3.4 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : 2dda7p --> 3dhq + pi Confidence Level: 2 Previously EC 4.6.1.3. now EC 4.2.3.4, 3-dehydroquinate synthase genes: LOCUS:BPLAN_146#ABBREVIATION:aroB#ECNUMBERS:4.6.1.3# proteins: NAME:_3-dehydroquinate synthase#ABBREVIATION:AroB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_146)
fast: false
reversible: false
name: _3-dehydroquinate synthase

542050
type: LocalParameter
value: 0.0

542049
type: LocalParameter
value: 0.0

542047
type: LocalParameter
value: 999999.0

542046
type: LocalParameter
value: 0.0

737887
type: SpeciesReference
stoichiometry: 1.0
species: 540013

737874
type: SpeciesReference
stoichiometry: 1.0
species: 539528

737861
type: SpeciesReference
stoichiometry: 1.0
species: 539502

540688
type: Reaction
kinetic law: 740477
product: 740465
product: 740453
reactant: 740441
notes: Abbreviation: R_FBAa Synonyms: _0 EC Number: 4.1.2.13 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : fdp <==> dhap + g3p Confidence Level: 2 genes: LOCUS:BPLAN_163#ABBREVIATION:fbaA#ECNUMBERS:4.1.2.13# proteins: NAME:fructose-bisphosphate aldolase II#ABBREVIATION:FbaA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_163)
fast: false
reversible: true
name: fructose-bisphosphate aldolaseA

542410
type: LocalParameter
value: 0.0

542409
type: LocalParameter
value: 0.0

542407
type: LocalParameter
value: 999999.0

542406
type: LocalParameter
value: -999999.0

740465
type: SpeciesReference
stoichiometry: 1.0
species: 539749

740453
type: SpeciesReference
stoichiometry: 1.0
species: 539702

740441
type: SpeciesReference
stoichiometry: 1.0
species: 539733

541267
type: Reaction
fast: false
reactant: 753396
name: ribonucleoside-diphosphate reductase (UDP)
notes: Abbreviation: R_RNDR4 Synonyms: _0 EC Number: 1.17.4.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : trdrd + udp --> dudp + h2o + trdox Confidence Level: 2 genes: LOCUS:BPLAN_330#ABBREVIATION:nrdE#ECNUMBERS:1.17.4.1# LOCUS:BPLAN_p004#ABBREVIATION:nrdF#ECNUMBERS:1.17.4.1# proteins: NAME:Ribonucleoside diphosphate reductase subunit alpha#ABBREVIATION:NrdE# NAME:ribonucleotide-diphosphate reductase beta subunit#ABBREVIATION:NrdE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_330 and BPLAN_p004)
product: 753420
product: 753408
product: 753432
reactant: 753384
reversible: false
kinetic law: 753444

753396
type: SpeciesReference
stoichiometry: 1.0
species: 540111

753420
type: SpeciesReference
stoichiometry: 1.0
species: 539779

753408
type: SpeciesReference
stoichiometry: 1.0
species: 539721

753432
type: SpeciesReference
stoichiometry: 1.0
species: 540092

753384
type: SpeciesReference
stoichiometry: 1.0
species: 540093

543675
type: LocalParameter
value: 0.0

543673
type: LocalParameter
value: 0.0

543671
type: LocalParameter
value: 999999.0

543669
type: LocalParameter
value: 0.0

540325
type: Reaction
reversible: false
reactant: 732913
product: 732949
reactant: 732925
notes: Abbreviation: R_ANS Synonyms: _0 EC Number: 4.1.3.27 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : chor + gln-L --> anth + glu-L + h + pyr Confidence Level: 2 genes: LOCUS:BPLAN_219#ABBREVIATION:trpD#ECNUMBERS:4.1.3.27,-!-,2.4.2.18# LOCUS:BPLAN_220#ABBREVIATION:trpE#ECNUMBERS:4.1.3.27# proteins: NAME:Anthranilate synthase I#ABBREVIATION:TrpE# NAME:anthranilate synthase II#ABBREVIATION:TrpD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_220) and (BPLAN_219)
product: 732961
kinetic law: 732986
product: 732937
product: 732973
fast: false
name: anthranilate synthase

732913
type: SpeciesReference
stoichiometry: 1.0
species: 539667

732949
type: SpeciesReference
stoichiometry: 1.0
species: 539760

732925
type: SpeciesReference
stoichiometry: 1.0
species: 539756

732961
type: SpeciesReference
stoichiometry: 1.0
species: 539783

541694
type: LocalParameter
value: 0.0

541693
type: LocalParameter
value: 0.0

541691
type: LocalParameter
value: 999999.0

541690
type: LocalParameter
value: 0.0

732937
type: SpeciesReference
stoichiometry: 1.0
species: 539639

732973
type: SpeciesReference
stoichiometry: 1.0
species: 540038

540862
type: Reaction
kinetic law: 744267
product: 744255
reactant: 744243
reactant: 744231
notes: Abbreviation: R_IPPMIb Synonyms: _0 EC Number: 4.2.1.33 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 2ippm + h2o <==> 3c3hmp Confidence Level: 2 Part of IPPMI (3-isopropylmalate dehydrogenase) enzyme added EC -NCD genes: LOCUS:BPLAN_565#ABBREVIATION:leuD#ECNUMBERS:4.2.1.33,-!-,4.2.1.35# LOCUS:BPLAN_566#ABBREVIATION:leuC#ECNUMBERS:4.2.1.33# proteins: NAME:Isopropylmalate isomerase small subunit#ABBREVIATION:LeuC# NAME:Isopropylmalate isomerase large subunit#ABBREVIATION:LeuD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_566 and BPLAN_565)
fast: false
reversible: true
name: _2-isopropylmalate hydratase

542762
type: LocalParameter
value: 0.0

542760
type: LocalParameter
value: 0.0

542759
type: LocalParameter
value: 999999.0

542757
type: LocalParameter
value: -999999.0

744255
type: SpeciesReference
stoichiometry: 1.0
species: 539524

744243
type: SpeciesReference
stoichiometry: 1.0
species: 539779

744231
type: SpeciesReference
stoichiometry: 1.0
species: 539510

541042
type: Reaction
fast: false
notes: Abbreviation: R_NTPP3 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dctp + h2o --> dcmp + h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_237#ABBREVIATION:mazG# proteins: NAME:Nucleotide triphosphate pyrophosphohydrolase#ABBREVIATION:MazG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_237)
product: 748391
reactant: 748367
product: 748403
product: 748379
kinetic law: 748415
reactant: 748355
name: Nucleoside triphosphate pyrophosphorylase (dctp)
reversible: false

748391
type: SpeciesReference
stoichiometry: 1.0
species: 539783

748367
type: SpeciesReference
stoichiometry: 1.0
species: 539779

748403
type: SpeciesReference
stoichiometry: 1.0
species: 540021

748379
type: SpeciesReference
stoichiometry: 1.0
species: 539694

543150
type: LocalParameter
value: 0.0

543148
type: LocalParameter
value: 0.0

543146
type: LocalParameter
value: 999999.0

543144
type: LocalParameter
value: 0.0

748355
type: SpeciesReference
stoichiometry: 1.0
species: 539695

540406
type: Reaction
kinetic law: 735600
product: 735588
reactant: 735575
notes: Abbreviation: R_CO2t Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: co2[e] <==> co2[c] Confidence Level: 1 tv renamed from CO2TPr to CO2t NCD genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: CO2 transporter via diffusion

541856
type: LocalParameter
value: 0.0

541855
type: LocalParameter
value: 0.0

541853
type: LocalParameter
value: 999999.0

541852
type: LocalParameter
value: -999999.0

735588
type: SpeciesReference
stoichiometry: 1.0
species: 539673

735575
type: SpeciesReference
stoichiometry: 1.0
species: 539675

540310
type: Reaction
product: 732635
reversible: true
notes: Abbreviation: R_ALAt2r Synonyms: _0 SUBSYSTEM: Putative Transporters Equation: ala-L[e] + h[e] <==> ala-L[c] + h[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
name: L-alanine reversible transport via proton symport
product: 732623
fast: false
kinetic law: 732647
reactant: 732610
reactant: 732598

732635
type: SpeciesReference
stoichiometry: 1.0
species: 539783

732623
type: SpeciesReference
stoichiometry: 1.0
species: 539628

541664
type: LocalParameter
value: 0.0

541663
type: LocalParameter
value: 0.0

541661
type: LocalParameter
value: 999999.0

541660
type: LocalParameter
value: -999999.0

732610
type: SpeciesReference
stoichiometry: 1.0
species: 539784

732598
type: SpeciesReference
stoichiometry: 1.0
species: 539630

541327
type: Reaction
product: 754680
fast: false
reactant: 754644
name: transaldolase
product: 754668
kinetic law: 754692
notes: Abbreviation: R_TALA Synonyms: _0 EC Number: 2.2.1.2 SUBSYSTEM: Pentose Phosphate Pathway Equation: [c] : g3p + s7p <==> e4p + f6p Confidence Level: 2 SMP genes: LOCUS:BPLAN_422#ABBREVIATION:tal#ECNUMBERS:2.2.1.2# proteins: NAME:transaldolase#ABBREVIATION:Tal# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_422)
reversible: true
reactant: 754656

754680
type: SpeciesReference
stoichiometry: 1.0
species: 539730

754644
type: SpeciesReference
stoichiometry: 1.0
species: 539749

754668
type: SpeciesReference
stoichiometry: 1.0
species: 539727

543815
type: LocalParameter
value: 0.0

543813
type: LocalParameter
value: 0.0

543811
type: LocalParameter
value: 999999.0

543809
type: LocalParameter
value: -999999.0

754656
type: SpeciesReference
stoichiometry: 1.0
species: 540050

540295
type: Reaction
kinetic law: 732310
product: 732298
reactant: 732285
notes: Abbreviation: R_AIRC3 Synonyms: _2 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : 5caiz --> 5aizc Confidence Level: 2 JLR- E.coli uses a two enzymes in the phosphoribosylaminoimidazole carboxylase step to generate 5aizc genes: LOCUS:BPLAN_154#ABBREVIATION:purE#ECNUMBERS:4.1.1.21# proteins: NAME:phosphoribosylaminoimidazole carboxylase II#ABBREVIATION:PurE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_154)
fast: false
reversible: false
name: phosphoribosylaminoimidazole carboxylase (mutase rxn)

541634
type: LocalParameter
value: 0.0

541633
type: LocalParameter
value: 0.0

541631
type: LocalParameter
value: 999999.0

541630
type: LocalParameter
value: 0.0

732298
type: SpeciesReference
stoichiometry: 1.0
species: 539562

732285
type: SpeciesReference
stoichiometry: 1.0
species: 539568

540787
type: Reaction
notes: Abbreviation: R_GTPCII2 Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : gtp + (3) h2o --> 25drapp + for + (2) h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_317#ABBREVIATION:ribBA#ECNUMBERS:3.5.4.25,-!-,4.1.99.12# proteins: NAME:_bifunctional 3,4 dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II#ABBREVIATION:RibBA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_317)
reversible: false
product: 742635
reactant: 742611
product: 742648
name: GTP cyclohydrolase II (25drapp)
product: 742623
fast: false
kinetic law: 742672
product: 742660
reactant: 742599

742635
type: SpeciesReference
stoichiometry: 1.0
species: 539739

742611
type: SpeciesReference
stoichiometry: 3.0
species: 539779

742648
type: SpeciesReference
stoichiometry: 2.0
species: 539783

742623
type: SpeciesReference
stoichiometry: 1.0
species: 539492

542608
type: LocalParameter
value: 0.0

542606
type: LocalParameter
value: 0.0

542605
type: LocalParameter
value: 999999.0

542603
type: LocalParameter
value: 0.0

742660
type: SpeciesReference
stoichiometry: 1.0
species: 540021

742599
type: SpeciesReference
stoichiometry: 1.0
species: 539776

540673
type: Reaction
kinetic law: 740285
product: 740273
reactant: 740261
notes: Abbreviation: R_EX_thr_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : thr-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Threonine exchange

542380
type: LocalParameter
value: 0.0

542379
type: LocalParameter
value: 0.0

542377
type: LocalParameter
value: 999999.0

542376
type: LocalParameter
value: 0.0

740273
type: SpeciesReference
stoichiometry: 1.0
species: 540201

740261
type: SpeciesReference
stoichiometry: 1.0
species: 540088

540370
type: Reaction
reactant: 734471
reactant: 734484
product: 734496
reversible: false
product: 734508
notes: Abbreviation: R_BPNT Synonyms: _0 EC Number: 3.1.3.7 SUBSYSTEM: Cysteine Metabolism Equation: [c] : h2o + pap --> amp + pi Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
name: _3',5'-bisphosphate nucleotidase
kinetic law: 734520
fast: false

734471
type: SpeciesReference
stoichiometry: 1.0
species: 539779

734484
type: SpeciesReference
stoichiometry: 1.0
species: 540002

734496
type: SpeciesReference
stoichiometry: 1.0
species: 539638

734508
type: SpeciesReference
stoichiometry: 1.0
species: 540013

541784
type: LocalParameter
value: 0.0

541783
type: LocalParameter
value: 0.0

541781
type: LocalParameter
value: 999999.0

541780
type: LocalParameter
value: 0.0

541276
type: Reaction
product: 753554
reactant: 753529
kinetic law: 753578
product: 753566
fast: false
name: succinyl-diaminopimelate desuccinylase
reversible: false
reactant: 753542
notes: Abbreviation: R_SDPDS Synonyms: _0 EC Number: 3.5.1.18 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : h2o + sl26da --> 26dap-LL + succ Confidence Level: 2 genes: LOCUS:BPLAN_320#ABBREVIATION:dapE#ECNUMBERS:3.5.1.18# proteins: NAME:Succinyl-diaminopimelate desuccinylase#ABBREVIATION:DapE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_320)

753554
type: SpeciesReference
stoichiometry: 1.0
species: 539494

753529
type: SpeciesReference
stoichiometry: 1.0
species: 539779

543696
type: LocalParameter
value: 0.0

543694
type: LocalParameter
value: 0.0

543692
type: LocalParameter
value: 999999.0

543690
type: LocalParameter
value: 0.0

753566
type: SpeciesReference
stoichiometry: 1.0
species: 540076

753542
type: SpeciesReference
stoichiometry: 1.0
species: 540068

540772
type: Reaction
reactant: 742259
product: 742283
product: 742271
kinetic law: 742307
fast: false
reversible: false
name: glycerol kinase
reactant: 742247
product: 742295
notes: Abbreviation: R_GLYK Synonyms: _0 EC Number: 2.7.1.30 SUBSYSTEM: Alternate Carbon Metabolism Equation: [c] : atp + glyc --> adp + glyc3p + h Confidence Level: 2 genes: LOCUS:BPLAN_181#ABBREVIATION:glpK#ECNUMBERS:2.7.1.30# proteins: NAME:glycerol kinase#ABBREVIATION:GlpK# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_181)

742259
type: SpeciesReference
stoichiometry: 1.0
species: 539768

742283
type: SpeciesReference
stoichiometry: 1.0
species: 539767

742271
type: SpeciesReference
stoichiometry: 1.0
species: 539611

542578
type: LocalParameter
value: 0.0

542576
type: LocalParameter
value: 0.0

542575
type: LocalParameter
value: 999999.0

542573
type: LocalParameter
value: 0.0

742247
type: SpeciesReference
stoichiometry: 1.0
species: 539659

742295
type: SpeciesReference
stoichiometry: 1.0
species: 539783

541372
type: Reaction
reactant: 755665
reactant: 755652
fast: false
reversible: false
product: 755703
kinetic law: 755715
notes: Abbreviation: R_TRPS1 Synonyms: _0 EC Number: 4.2.1.20 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : 3ig3p + ser-L --> g3p + h2o + trp-L Confidence Level: 2 genes: LOCUS:BPLAN_214#ABBREVIATION:trpA#ECNUMBERS:4.2.1.20# LOCUS:BPLAN_215#ABBREVIATION:trpB#ECNUMBERS:4.2.1.20# proteins: NAME:Tryptophan synthase#ABBREVIATION:TrpA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_214 and BPLAN_215)
name: tryptophan synthase (indoleglycerol phosphate)
product: 755691
product: 755679

755665
type: SpeciesReference
stoichiometry: 1.0
species: 540056

755652
type: SpeciesReference
stoichiometry: 1.0
species: 539534

755703
type: SpeciesReference
stoichiometry: 1.0
species: 540094

543920
type: LocalParameter
value: 0.0

543918
type: LocalParameter
value: 0.0

543916
type: LocalParameter
value: 999999.0

543914
type: LocalParameter
value: 0.0

755691
type: SpeciesReference
stoichiometry: 1.0
species: 539779

755679
type: SpeciesReference
stoichiometry: 1.0
species: 539749

540235
type: Reaction
product: 731006
reversible: false
product: 730994
fast: false
reactant: 730970
kinetic law: 731018
name: acetylornithine deacetylase
reactant: 730982
notes: Abbreviation: R_ACODA Synonyms: _0 EC Number: 3.5.1.16 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : acorn + h2o --> ac + orn Confidence Level: 2 genes: LOCUS:BPLAN_320#ABBREVIATION:argE#ECNUMBERS:3.5.1.16# proteins: NAME:acetylornithine deacetylase#ABBREVIATION:ArgE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_320)

731006
type: SpeciesReference
stoichiometry: 1.0
species: 539990

730994
type: SpeciesReference
stoichiometry: 1.0
species: 539584

730970
type: SpeciesReference
stoichiometry: 1.0
species: 539599

541518
type: LocalParameter
value: 0.0

541516
type: LocalParameter
value: 0.0

541515
type: LocalParameter
value: 999999.0

541513
type: LocalParameter
value: 0.0

730982
type: SpeciesReference
stoichiometry: 1.0
species: 539779

541138
type: Reaction
reactant: 750508
name: pantothenate kinase
reversible: false
product: 750544
product: 750520
notes: Abbreviation: R_PNTK Synonyms: _0 EC Number: 2.7.1.33 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : atp + pnto-R --> 4ppan + adp + h Confidence Level: 2 genes: LOCUS:BPLAN_503#ABBREVIATION:coaA#ECNUMBERS:2.7.1.33# proteins: NAME:pantothenate kinase#ABBREVIATION:CoaA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_503)
kinetic law: 750556
product: 750532
reactant: 750496
fast: false

750508
type: SpeciesReference
stoichiometry: 1.0
species: 540015

750544
type: SpeciesReference
stoichiometry: 1.0
species: 539783

750520
type: SpeciesReference
stoichiometry: 1.0
species: 539556

543374
type: LocalParameter
value: 0.0

543372
type: LocalParameter
value: 0.0

543370
type: LocalParameter
value: 999999.0

543368
type: LocalParameter
value: 0.0

750532
type: SpeciesReference
stoichiometry: 1.0
species: 539611

750496
type: SpeciesReference
stoichiometry: 1.0
species: 539659

541444
type: Reaction
reactant: 757286
reactant: 757298
product: 757346
name: L-valine transport via ABC system
product: 757359
reactant: 757310
fast: false
notes: Abbreviation: R_VALabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + h2o[c] + val-L[e] --> adp[c] + h[c] + pi[c] + val-L[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
reversible: false
product: 757322
product: 757334
kinetic law: 757371

757286
type: SpeciesReference
stoichiometry: 1.0
species: 539659

757298
type: SpeciesReference
stoichiometry: 1.0
species: 539779

757346
type: SpeciesReference
stoichiometry: 1.0
species: 540013

757359
type: SpeciesReference
stoichiometry: 1.0
species: 540122

757310
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stoichiometry: 1.0
species: 540123

757322
type: SpeciesReference
stoichiometry: 1.0
species: 539611

757334
type: SpeciesReference
stoichiometry: 1.0
species: 539783

544088
type: LocalParameter
value: 0.0

544086
type: LocalParameter
value: 0.0

544084
type: LocalParameter
value: 999999.0

544082
type: LocalParameter
value: 0.0

541291
type: Reaction
kinetic law: 753882
product: 753869
product: 753857
reactant: 753845
notes: Abbreviation: R_SHCHC Synonyms: _1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 5ephchc --> 2shchc + pyr Confidence Level: 2 JLR genes: LOCUS:BPLAN_504#ABBREVIATION:menH#ECNUMBERS:4.2.99.20# proteins: NAME:SHCHC cynthase#ABBREVIATION:MenH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_504)
fast: false
reversible: false
name: _2-succinyl-6-hydroxy-2,4-cyclohexadiene 1-carboxylate synthase

543731
type: LocalParameter
value: 0.0

543729
type: LocalParameter
value: 0.0

543727
type: LocalParameter
value: 999999.0

543725
type: LocalParameter
value: 0.0

753869
type: SpeciesReference
stoichiometry: 1.0
species: 540038

753857
type: SpeciesReference
stoichiometry: 1.0
species: 539520

753845
type: SpeciesReference
stoichiometry: 1.0
species: 539572

541312
type: Reaction
kinetic law: 754365
product: 754353
product: 754341
reactant: 754329
notes: Abbreviation: R_SUCBZS Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 2shchc --> h2o + sucbz Confidence Level: 2 genes: LOCUS:BPLAN_366#ABBREVIATION:menC#ECNUMBERS:4.2.1.-# proteins: NAME:O-succinylbenzoate-CoA synthase#ABBREVIATION:MenC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_366)
fast: false
reversible: false
name: O-succinylbenzoate-CoA synthase

543780
type: LocalParameter
value: 0.0

543778
type: LocalParameter
value: 0.0

543776
type: LocalParameter
value: 999999.0

543774
type: LocalParameter
value: 0.0

754353
type: SpeciesReference
stoichiometry: 1.0
species: 540075

754341
type: SpeciesReference
stoichiometry: 1.0
species: 539779

754329
type: SpeciesReference
stoichiometry: 1.0
species: 539520

540658
type: Reaction
kinetic law: 740104
product: 740092
reactant: 740080
notes: Abbreviation: R_EX_pro_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : pro-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Proline exchange

542350
type: LocalParameter
value: 0.0

542349
type: LocalParameter
value: 0.0

542347
type: LocalParameter
value: 999999.0

542346
type: LocalParameter
value: -999999.0

740092
type: SpeciesReference
stoichiometry: 1.0
species: 540186

740080
type: SpeciesReference
stoichiometry: 1.0
species: 540029

540964
type: Reaction
reversible: true
kinetic law: 746821
reactant: 746784
product: 746797
fast: false
product: 746809
name: nucleoside-diphosphate kinase (ATP:GDP)
reactant: 746772
notes: Abbreviation: R_NDPK1 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + gdp <==> adp + gtp Confidence Level: 2 Many nucleoside diphosphates (eight described) can act as acceptors. While many ribo- and deoxyribonucleoside triphosphates can act as donors, only ATP is chosen as a donor to minimize the number of total reactions. genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)

542971
type: LocalParameter
value: 0.0

542969
type: LocalParameter
value: 0.0

542967
type: LocalParameter
value: 999999.0

542965
type: LocalParameter
value: -999999.0

746784
type: SpeciesReference
stoichiometry: 1.0
species: 539754

746797
type: SpeciesReference
stoichiometry: 1.0
species: 539611

746809
type: SpeciesReference
stoichiometry: 1.0
species: 539776

746772
type: SpeciesReference
stoichiometry: 1.0
species: 539659

541147
type: Reaction
kinetic law: 750713
product: 750701
reactant: 750689
notes: Abbreviation: R_PPBNGt Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: ppbng[e] <==> ppbng[c] Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Phorphobilinogen transport

543395
type: LocalParameter
value: 0.0

543393
type: LocalParameter
value: 0.0

543391
type: LocalParameter
value: 999999.0

543389
type: LocalParameter
value: -999999.0

750701
type: SpeciesReference
stoichiometry: 1.0
species: 540017

750689
type: SpeciesReference
stoichiometry: 1.0
species: 540018

540643
type: Reaction
kinetic law: 739922
product: 739910
reactant: 739898
notes: Abbreviation: R_EX_o2_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : o2 <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: O2 exchange

542320
type: LocalParameter
value: 0.0

542319
type: LocalParameter
value: 0.0

542317
type: LocalParameter
value: 0.0

542316
type: LocalParameter
value: -999999.0

739910
type: SpeciesReference
stoichiometry: 1.0
species: 540171

739898
type: SpeciesReference
stoichiometry: 1.0
species: 539980

540832
type: Reaction
product: 743613
reactant: 743576
product: 743600
product: 743637
fast: false
notes: Abbreviation: R_IG3PS Synonyms: _0 SUBSYSTEM: Histidine Metabolism Equation: [c] : gln-L + prlp --> aicar + eig3p + glu-L + h Confidence Level: 2 Essential in L-histidine synthesis: No definite EC number assigned: EC 2.4.2.-; HisF cyclase genes: LOCUS:BPLAN_203#ABBREVIATION:hisH#ECNUMBERS:2.4.2.-# LOCUS:BPLAN_201#ABBREVIATION:hisF#ECNUMBERS:2.4.2.-# proteins: NAME:Imadazoleglycerol phosphate synthase#ABBREVIATION:HisF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_203 and BPLAN_201)
name: Imidazole-glycerol-3-phosphate synthase
reactant: 743588
kinetic law: 743649
reversible: false
product: 743625

743613
type: SpeciesReference
stoichiometry: 1.0
species: 539728

743576
type: SpeciesReference
stoichiometry: 1.0
species: 539756

743600
type: SpeciesReference
stoichiometry: 1.0
species: 539618

743637
type: SpeciesReference
stoichiometry: 1.0
species: 539783

743588
type: SpeciesReference
stoichiometry: 1.0
species: 540027

542698
type: LocalParameter
value: 0.0

542696
type: LocalParameter
value: 0.0

542695
type: LocalParameter
value: 999999.0

542693
type: LocalParameter
value: 0.0

743625
type: SpeciesReference
stoichiometry: 1.0
species: 539760

540562
type: Reaction
kinetic law: 738943
product: 738931
reactant: 738919
notes: Abbreviation: R_EX_asp_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : asp-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Aspartate exchange

542158
type: LocalParameter
value: 0.0

542157
type: LocalParameter
value: 0.0

542155
type: LocalParameter
value: 999999.0

542154
type: LocalParameter
value: 0.0

738931
type: SpeciesReference
stoichiometry: 1.0
species: 540135

738919
type: SpeciesReference
stoichiometry: 1.0
species: 539655

540577
type: Reaction
kinetic law: 739125
product: 739113
reactant: 739101
notes: Abbreviation: R_EX_for_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : for <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Formate exchange

542188
type: LocalParameter
value: 0.0

542187
type: LocalParameter
value: 0.0

542185
type: LocalParameter
value: 999999.0

542184
type: LocalParameter
value: 0.0

739113
type: SpeciesReference
stoichiometry: 1.0
species: 540141

739101
type: SpeciesReference
stoichiometry: 1.0
species: 539740

540979
type: Reaction
product: 747112
product: 747100
kinetic law: 747124
name: nucleoside-diphosphate kinase (ATP:dUDP)
reactant: 747088
fast: false
reactant: 747076
notes: Abbreviation: R_NDPK6 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dudp <==> adp + dutp Confidence Level: 2 Many nucleoside diphosphates (eight described) can act as acceptors. While many ribo- and deoxyribonucleoside triphosphates can act as donors, only ATP is chosen as a donor to minimize the number of total reactions. genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)
reversible: true

747112
type: SpeciesReference
stoichiometry: 1.0
species: 539725

747100
type: SpeciesReference
stoichiometry: 1.0
species: 539611

543004
type: LocalParameter
value: 0.0

543002
type: LocalParameter
value: 0.0

543001
type: LocalParameter
value: 999999.0

542999
type: LocalParameter
value: -999999.0

747088
type: SpeciesReference
stoichiometry: 1.0
species: 539721

747076
type: SpeciesReference
stoichiometry: 1.0
species: 539659

540781
type: Reaction
name: geranyltranstransferase
product: 742513
reversible: false
kinetic law: 742525
notes: Abbreviation: R_GRTT Synonyms: _0 EC Number: 2.5.1.10 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : grdp + ipdp --> frdp + ppi Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reactant: 742489
reactant: 742477
product: 742501

742513
type: SpeciesReference
stoichiometry: 1.0
species: 540021

542596
type: LocalParameter
value: 0.0

542594
type: LocalParameter
value: 0.0

542593
type: LocalParameter
value: 999999.0

542591
type: LocalParameter
value: 0.0

742489
type: SpeciesReference
stoichiometry: 1.0
species: 539926

742477
type: SpeciesReference
stoichiometry: 1.0
species: 539773

742501
type: SpeciesReference
stoichiometry: 1.0
species: 539743

541192
type: Reaction
reversible: true
fast: false
product: 751789
reactant: 751752
notes: Abbreviation: R_PROt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: h[e] + pro-L[e] <==> h[c] + pro-L[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
name: L-proline reversible transport via proton symport
reactant: 751764
kinetic law: 751801
product: 751777

751789
type: SpeciesReference
stoichiometry: 1.0
species: 540028

751752
type: SpeciesReference
stoichiometry: 1.0
species: 539784

751764
type: SpeciesReference
stoichiometry: 1.0
species: 540029

543500
type: LocalParameter
value: 0.0

543498
type: LocalParameter
value: 0.0

543496
type: LocalParameter
value: 999999.0

543494
type: LocalParameter
value: -999999.0

751777
type: SpeciesReference
stoichiometry: 1.0
species: 539783

540766
type: Reaction
product: 742175
fast: false
reactant: 742151
reactant: 742163
notes: Abbreviation: R_GLYCLTt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: glyclt[e] + h[e] <==> glyclt[c] + h[c] Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
product: 742187
kinetic law: 742199
reversible: true
name: glycolate transport via proton symport, reversible

742175
type: SpeciesReference
stoichiometry: 1.0
species: 539770

742151
type: SpeciesReference
stoichiometry: 1.0
species: 539771

742163
type: SpeciesReference
stoichiometry: 1.0
species: 539784

742187
type: SpeciesReference
stoichiometry: 1.0
species: 539783

542566
type: LocalParameter
value: 0.0

542564
type: LocalParameter
value: 0.0

542563
type: LocalParameter
value: 999999.0

542561
type: LocalParameter
value: -999999.0

541321
type: Reaction
reactant: 754498
product: 754523
kinetic law: 754547
notes: Abbreviation: R_SUCD4 Synonyms: _0 SUBSYSTEM: Oxidative Phosphorylation Equation: [c] : fadh2 + mqn8 <==> fad + mql8 Confidence Level: 2 JLR genes: LOCUS:BPLAN_482#ABBREVIATION:sdhC# LOCUS:BPLAN_481#ABBREVIATION:sdhA#ECNUMBERS:1.3.99.1# LOCUS:BPLAN_480#ABBREVIATION:sdhB#ECNUMBERS:1.3.99.1# proteins: NAME:succinate dehydrogenase#ABBREVIATION:Sdh# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_482 and BPLAN_481 and BPLAN_480)
reactant: 754511
name: succinate dehydrogenase
fast: false
reversible: true
product: 754535

754498
type: SpeciesReference
stoichiometry: 1.0
species: 539732

754523
type: SpeciesReference
stoichiometry: 1.0
species: 539731

543801
type: LocalParameter
value: 0.0

543799
type: LocalParameter
value: 0.0

543797
type: LocalParameter
value: 999999.0

543795
type: LocalParameter
value: -999999.0

754511
type: SpeciesReference
stoichiometry: 1.0
species: 539955

754535
type: SpeciesReference
stoichiometry: 1.0
species: 539953

540847
type: Reaction
kinetic law: 743978
product: 743965
product: 743953
reactant: 743941
notes: Abbreviation: R_IMPC Synonyms: _0 EC Number: 3.5.4.10 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : fprica --> h2o + imp Confidence Level: 2 genes: LOCUS:BPLAN_159#ABBREVIATION:purH#ECNUMBERS:3.5.4.10,-!-,2.1.2.3# proteins: NAME:AICAR transformylase and IMP cyclohydrolase#ABBREVIATION:PurH# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_159)
fast: false
reversible: false
name: IMP cyclohydrolase

542732
type: LocalParameter
value: 0.0

542730
type: LocalParameter
value: 0.0

542729
type: LocalParameter
value: 999999.0

542727
type: LocalParameter
value: 0.0

743965
type: SpeciesReference
stoichiometry: 1.0
species: 539920

743953
type: SpeciesReference
stoichiometry: 1.0
species: 539779

743941
type: SpeciesReference
stoichiometry: 1.0
species: 539742

540445
type: Reaction
product: 736554
reactant: 736542
reversible: false
product: 736566
fast: false
notes: Abbreviation: R_DAPDC Synonyms: _0 EC Number: 4.1.1.20 SUBSYSTEM: Threonine and Lysine Metabolism Equation: [c] : 26dap-M + h --> co2 + lys-L Confidence Level: 2 genes: LOCUS:BPLAN_309#ABBREVIATION:lysA#ECNUMBERS:4.1.1.20# proteins: NAME:Diaminopimelate decarboxylase#ABBREVIATION:LysA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_309)
reactant: 736530
kinetic law: 736578
name: diaminopimelate decarboxylase

736554
type: SpeciesReference
stoichiometry: 1.0
species: 539673

736542
type: SpeciesReference
stoichiometry: 1.0
species: 539783

736566
type: SpeciesReference
stoichiometry: 1.0
species: 539936

736530
type: SpeciesReference
stoichiometry: 1.0
species: 539496

541932
type: LocalParameter
value: 0.0

541930
type: LocalParameter
value: 0.0

541929
type: LocalParameter
value: 999999.0

541927
type: LocalParameter
value: 0.0

540244
type: Reaction
reversible: true
kinetic law: 731211
reactant: 731175
notes: Abbreviation: R_ACt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: ac[e] + h[e] <==> ac[c] + h[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
name: acetate reversible transport via proton symport
fast: false
product: 731187
reactant: 731163
product: 731199

541534
type: LocalParameter
value: 0.0

541533
type: LocalParameter
value: 0.0

541531
type: LocalParameter
value: 999999.0

541530
type: LocalParameter
value: -999999.0

731175
type: SpeciesReference
stoichiometry: 1.0
species: 539784

731187
type: SpeciesReference
stoichiometry: 1.0
species: 539584

731163
type: SpeciesReference
stoichiometry: 1.0
species: 539586

731199
type: SpeciesReference
stoichiometry: 1.0
species: 539783

540751
type: Reaction
reversible: false
reactant: 741847
notes: Abbreviation: R_GLUPRT Synonyms: _0 EC Number: 2.4.2.14 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : gln-L + h2o + prpp --> glu-L + ppi + pram Confidence Level: 2 genes: LOCUS:BPLAN_156#ABBREVIATION:purF#ECNUMBERS:2.4.2.14# proteins: NAME:Amidophosphoribosyltransferase#ABBREVIATION:PurF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_156)
reactant: 741835
reactant: 741859
kinetic law: 741907
product: 741871
name: glutamine phosphoribosyldiphosphate amidotransferase
fast: false
product: 741895
product: 741883

741847
type: SpeciesReference
stoichiometry: 1.0
species: 539779

741835
type: SpeciesReference
stoichiometry: 1.0
species: 539756

741859
type: SpeciesReference
stoichiometry: 1.0
species: 540031

542536
type: LocalParameter
value: 0.0

542534
type: LocalParameter
value: 0.0

542533
type: LocalParameter
value: 999999.0

542532
type: LocalParameter
value: 0.0

741871
type: SpeciesReference
stoichiometry: 1.0
species: 539760

741895
type: SpeciesReference
stoichiometry: 1.0
species: 540022

741883
type: SpeciesReference
stoichiometry: 1.0
species: 540021

541057
type: Reaction
reversible: false
notes: Abbreviation: R_NTPP8 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : h2o + utp --> h + ppi + ump Confidence Level: 2 JLR genes: LOCUS:BPLAN_237#ABBREVIATION:mazG# proteins: NAME:Nucleotide triphosphate pyrophosphohydrolase#ABBREVIATION:MazG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_237)
kinetic law: 748780
name: Nucleoside triphosphate pyrophosphorylase (utp)
reactant: 748731
product: 748744
product: 748756
fast: false
product: 748768
reactant: 748719

543185
type: LocalParameter
value: 0.0

543183
type: LocalParameter
value: 0.0

543181
type: LocalParameter
value: 999999.0

543179
type: LocalParameter
value: 0.0

748731
type: SpeciesReference
stoichiometry: 1.0
species: 540121

748744
type: SpeciesReference
stoichiometry: 1.0
species: 539783

748756
type: SpeciesReference
stoichiometry: 1.0
species: 540021

748768
type: SpeciesReference
stoichiometry: 1.0
species: 540114

748719
type: SpeciesReference
stoichiometry: 1.0
species: 539779

541246
type: Reaction
kinetic law: 752963
notes: Abbreviation: R_PYRt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: h[e] + pyr[e] <==> h[c] + pyr[c] Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:
product: 752951
reversible: true
reactant: 752927
reactant: 752915
fast: false
product: 752939
name: pyruvate reversible transport via proton symport

543626
type: LocalParameter
value: 0.0

543624
type: LocalParameter
value: 0.0

543622
type: LocalParameter
value: 999999.0

543620
type: LocalParameter
value: -999999.0

752951
type: SpeciesReference
stoichiometry: 1.0
species: 540038

752927
type: SpeciesReference
stoichiometry: 1.0
species: 540039

752915
type: SpeciesReference
stoichiometry: 1.0
species: 539784

752939
type: SpeciesReference
stoichiometry: 1.0
species: 539783

541132
type: Reaction
reactant: 750375
product: 750399
reactant: 750387
product: 750411
name: pyrimidine phosphatase
kinetic law: 750423
fast: false
notes: Abbreviation: R_PMDPHT Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : 5aprbu + h2o --> 4r5au + pi Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
reversible: false

750375
type: SpeciesReference
stoichiometry: 1.0
species: 539564

750399
type: SpeciesReference
stoichiometry: 1.0
species: 539560

750387
type: SpeciesReference
stoichiometry: 1.0
species: 539779

750411
type: SpeciesReference
stoichiometry: 1.0
species: 540013

543360
type: LocalParameter
value: 0.0

543358
type: LocalParameter
value: 0.0

543356
type: LocalParameter
value: 999999.0

543354
type: LocalParameter
value: 0.0

541381
type: Reaction
reactant: 755835
reversible: true
product: 755859
reactant: 755847
kinetic law: 755883
fast: false
notes: Abbreviation: R_TRPt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: h[e] + trp-L[e] <==> h[c] + trp-L[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
product: 755871
name: L-tryptophan reversible transport via proton symport

755835
type: SpeciesReference
stoichiometry: 1.0
species: 539784

755859
type: SpeciesReference
stoichiometry: 1.0
species: 539783

755847
type: SpeciesReference
stoichiometry: 1.0
species: 540095

543941
type: LocalParameter
value: 0.0

543939
type: LocalParameter
value: 0.0

543937
type: LocalParameter
value: 999999.0

543935
type: LocalParameter
value: -999999.0

755871
type: SpeciesReference
stoichiometry: 1.0
species: 540094

541231
type: Reaction
kinetic law: 752623
product: 752599
reactant: 752575
reactant: 752587
notes: Abbreviation: R_PUNP6 Synonyms: _0 EC Number: 2.4.2.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : din + pi <==> 2dr1p + hxan Confidence Level: 2 Specificity not completely determined. Can also catalyse ribosyltransferase reactions of the type catalysed by EC 2.4.2.5, nucleoside ribosyltransferase genes: LOCUS:BPLAN_265#ABBREVIATION:xapA#ECNUMBERS:2.4.2.1# proteins: NAME:purine nucleoside phosphorylase#ABBREVIATION:XapA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_265)
product: 752611
fast: false
reversible: true
name: purine-nucleoside phosphorylase (Deoxyinosine)

543591
type: LocalParameter
value: 0.0

543589
type: LocalParameter
value: 0.0

543587
type: LocalParameter
value: 999999.0

543585
type: LocalParameter
value: -999999.0

752599
type: SpeciesReference
stoichiometry: 1.0
species: 539508

752575
type: SpeciesReference
stoichiometry: 1.0
species: 539712

752587
type: SpeciesReference
stoichiometry: 1.0
species: 540013

752611
type: SpeciesReference
stoichiometry: 1.0
species: 539796

540505
type: Reaction
kinetic law: 737848
product: 737836
product: 737824
reactant: 737812
notes: Abbreviation: R_DHQD Synonyms: _0 EC Number: 4.2.1.10 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : 3dhq <==> 3dhsk + h2o Confidence Level: 2 genes: LOCUS:BPLAN_551#ABBREVIATION:aroD#ECNUMBERS:4.2.1.10# proteins: NAME:_3-dehydroquinate dehydratase#ABBREVIATION:AroD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_551)
fast: false
reversible: true
name: _3-dehydroquinate dehydratase

542044
type: LocalParameter
value: 0.0

542043
type: LocalParameter
value: 0.0

542041
type: LocalParameter
value: 999999.0

542040
type: LocalParameter
value: -999999.0

737836
type: SpeciesReference
stoichiometry: 1.0
species: 539779

737824
type: SpeciesReference
stoichiometry: 1.0
species: 539530

737812
type: SpeciesReference
stoichiometry: 1.0
species: 539528

540652
type: Reaction
kinetic law: 740032
product: 740020
reactant: 740007
notes: Abbreviation: R_EX_pnto_R_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : pnto-R <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: (R)-Pantothenate exchange

542338
type: LocalParameter
value: 0.0

542337
type: LocalParameter
value: 0.0

542335
type: LocalParameter
value: 999999.0

542334
type: LocalParameter
value: -999999.0

740020
type: SpeciesReference
stoichiometry: 1.0
species: 540180

740007
type: SpeciesReference
stoichiometry: 1.0
species: 540016

540571
type: Reaction
kinetic law: 739052
product: 739040
reactant: 739028
notes: Abbreviation: R_EX_dhor_S_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : dhor-S <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: S-Dihydroorotate

542176
type: LocalParameter
value: 0.0

542175
type: LocalParameter
value: 0.0

542173
type: LocalParameter
value: 999999.0

542172
type: LocalParameter
value: -999999.0

739040
type: SpeciesReference
stoichiometry: 1.0
species: 540138

739028
type: SpeciesReference
stoichiometry: 1.0
species: 539709

540214
type: Reaction
reactant: 730485
reversible: false
reactant: 730497
notes: Abbreviation: R_4HTHRS Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : h2o + phthr --> 4hthr + pi Confidence Level: 2 JLR genes: LOCUS:BPLAN_140#ABBREVIATION:thrC#ECNUMBERS:4.2.3.1# proteins: NAME:Threonine synthase#ABBREVIATION:ThrC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_140)
product: 730521
fast: false
kinetic law: 730533
name: _4-Hydroxy-L-threonine synthase
product: 730509

730485
type: SpeciesReference
stoichiometry: 1.0
species: 539779

730497
type: SpeciesReference
stoichiometry: 1.0
species: 540012

730521
type: SpeciesReference
stoichiometry: 1.0
species: 540013

541459
type: LocalParameter
value: 0.0

541456
type: LocalParameter
value: 0.0

541453
type: LocalParameter
value: 999999.0

541450
type: LocalParameter
value: 0.0

730509
type: SpeciesReference
stoichiometry: 1.0
species: 539548

541396
type: Reaction
product: 756212
product: 756200
reactant: 756176
reversible: false
fast: false
kinetic law: 756224
notes: Abbreviation: R_UAGCVT Synonyms: _0 EC Number: 2.5.1.7 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : pep + uacgam --> pi + uaccg Confidence Level: 2 genes: LOCUS:BPLAN_499#ABBREVIATION:murA#ECNUMBERS:2.5.1.7# proteins: NAME:UDP-N-acetylglucosamine-enolpyruvate transferase#ABBREVIATION:MurA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_499)
reactant: 756188
name: UDP-N-acetylglucosamine 1-carboxyvinyltransferase

756212
type: SpeciesReference
stoichiometry: 1.0
species: 540102

756200
type: SpeciesReference
stoichiometry: 1.0
species: 540013

756176
type: SpeciesReference
stoichiometry: 1.0
species: 540005

543976
type: LocalParameter
value: 0.0

543974
type: LocalParameter
value: 0.0

543972
type: LocalParameter
value: 999999.0

543970
type: LocalParameter
value: 0.0

756188
type: SpeciesReference
stoichiometry: 1.0
species: 540103

541120
type: Reaction
kinetic law: 750179
product: 750167
reactant: 750155
notes: Abbreviation: R_PGM Synonyms: _0 EC Number: 5.4.2.1 SUBSYSTEM: Glycolysis/Gluconeogenesis Equation: [c] : 2pg <==> 3pg Confidence Level: 2 SMP genes: LOCUS:BPLAN_405#ABBREVIATION:gpmA#ECNUMBERS:5.4.2.1# proteins: NAME:phosphoglycerate mutase I#ABBREVIATION:GpmA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_405)
fast: false
reversible: true
name: phosphoglycerate mutase

543332
type: LocalParameter
value: 0.0

543330
type: LocalParameter
value: 0.0

543328
type: LocalParameter
value: 999999.0

543326
type: LocalParameter
value: -999999.0

750167
type: SpeciesReference
stoichiometry: 1.0
species: 539540

750155
type: SpeciesReference
stoichiometry: 1.0
species: 539518

540454
type: Reaction
kinetic law: 736748
reactant: 736699
name: _3,4-Dihydroxy-2-butanone-4-phosphate synthase
product: 736736
product: 736724
reversible: false
notes: Abbreviation: R_DB4PS Synonyms: _1 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : ru5p-D --> db4p + for + h Confidence Level: 2 No EC number: ribA in B. subtilis catalyzes two reactions (GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase) genes: LOCUS:BPLAN_317#ABBREVIATION:ribBA#ECNUMBERS:3.5.4.25,-!-,4.1.99.12# proteins: NAME:_bifunctional 3,4 dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II#ABBREVIATION:RibBA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_317)
product: 736712
fast: false

541948
type: LocalParameter
value: 0.0

541947
type: LocalParameter
value: 0.0

541945
type: LocalParameter
value: 999999.0

541944
type: LocalParameter
value: 0.0

736699
type: SpeciesReference
stoichiometry: 1.0
species: 540047

736736
type: SpeciesReference
stoichiometry: 1.0
species: 539783

736724
type: SpeciesReference
stoichiometry: 1.0
species: 539739

736712
type: SpeciesReference
stoichiometry: 1.0
species: 539690

540229
type: Reaction
fast: false
name: acetolactate synthase
kinetic law: 730898
reactant: 730850
notes: Abbreviation: R_ACLS Synonyms: _0 EC Number: 4.1.3.18 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : h + (2) pyr --> alac-S + co2 Confidence Level: 2 A flavoprotein. Requires thiamine diphosphate; also catalyses the formation of 2-aceto-2-hydroxybutanoate (see ACHBS) Also EC 2.2.1.6 - NCD genes: LOCUS:BPLAN_084#ABBREVIATION:ilvI#ECNUMBERS:2.2.1.6# LOCUS:BPLAN_085#ABBREVIATION:ilvH#ECNUMBERS:2.2.1.6# proteins: NAME:acetolactate synthase III#ABBREVIATION:IlvHI# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_085 and BPLAN_084)
reversible: false
reactant: 730862
product: 730886
product: 730874

541506
type: LocalParameter
value: 0.0

541503
type: LocalParameter
value: 0.0

541502
type: LocalParameter
value: 999999.0

541500
type: LocalParameter
value: 0.0

730850
type: SpeciesReference
stoichiometry: 1.0
species: 539783

730862
type: SpeciesReference
stoichiometry: 2.0
species: 540038

730886
type: SpeciesReference
stoichiometry: 1.0
species: 539673

730874
type: SpeciesReference
stoichiometry: 1.0
species: 539634

541339
type: Reaction
kinetic law: 755005
product: 754993
product: 754981
reactant: 754969
notes: Abbreviation: R_THRD_L Synonyms: _1 EC Number: 4.3.1.19 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : thr-L --> 2obut + nh4 Confidence Level: 2 Previous EC number: 4.2.1.16. New EC number 4.3.1.19. Can't enter this.... genes: LOCUS:BPLAN_087#ABBREVIATION:ilvA#ECNUMBERS:4.3.1.19# proteins: NAME:threonine deaminase#ABBREVIATION:IlvA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_087)
fast: false
reversible: false
name: L-threonine deaminase

543843
type: LocalParameter
value: 0.0

543841
type: LocalParameter
value: 0.0

543839
type: LocalParameter
value: 999999.0

543837
type: LocalParameter
value: 0.0

754993
type: SpeciesReference
stoichiometry: 1.0
species: 539970

754981
type: SpeciesReference
stoichiometry: 1.0
species: 539512

754969
type: SpeciesReference
stoichiometry: 1.0
species: 540087

541324
type: Reaction
reversible: true
reactant: 754571
product: 754620
fast: false
product: 754595
notes: Abbreviation: R_SUCOAS Synonyms: _0 EC Number: 6.2.1.5 SUBSYSTEM: Citric Acid Cycle Equation: [c] : atp + coa + succ <==> adp + pi + succoa Confidence Level: 2 genes: LOCUS:BPLAN_049#ABBREVIATION:sucC#ECNUMBERS:6.2.1.5# LOCUS:BPLAN_594#ABBREVIATION:sucD#ECNUMBERS:6.2.1.5# proteins: NAME:succinyl-CoA synthetase alpha chain#ABBREVIATION:SucD# NAME:succinyl-CoA synthetase beta chain#ABBREVIATION:SucC# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_049 and BPLAN_594)
kinetic law: 754632
reactant: 754559
product: 754608
reactant: 754583
name: succinyl-CoA synthetase (ADP-forming)

754571
type: SpeciesReference
stoichiometry: 1.0
species: 539677

754620
type: SpeciesReference
stoichiometry: 1.0
species: 540078

754595
type: SpeciesReference
stoichiometry: 1.0
species: 539611

543808
type: LocalParameter
value: 0.0

543806
type: LocalParameter
value: 0.0

543804
type: LocalParameter
value: 999999.0

543802
type: LocalParameter
value: -999999.0

754559
type: SpeciesReference
stoichiometry: 1.0
species: 539659

754608
type: SpeciesReference
stoichiometry: 1.0
species: 540013

754583
type: SpeciesReference
stoichiometry: 1.0
species: 540076

541066
type: Reaction
kinetic law: 748938
product: 748926
reactant: 748914
notes: Abbreviation: R_O2t Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: o2[e] <==> o2[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: o2 transport (diffusion)

543206
type: LocalParameter
value: 0.0

543204
type: LocalParameter
value: 0.0

543202
type: LocalParameter
value: 999999.0

543200
type: LocalParameter
value: -999999.0

748926
type: SpeciesReference
stoichiometry: 1.0
species: 539977

748914
type: SpeciesReference
stoichiometry: 1.0
species: 539980

540907
type: Reaction
product: 745405
product: 745393
name: malic enzyme (NADP)
reactant: 745381
kinetic law: 745429
notes: Abbreviation: R_ME2 Synonyms: _6 EC Number: 1.1.1.40 SUBSYSTEM: Anaplerotic reactions Equation: [c] : mal-L + nadp --> co2 + nadph + pyr Confidence Level: 2 genes: LOCUS:BPLAN_230#ABBREVIATION:maeB# proteins: NAME:Malic enzyme (NADP)#ABBREVIATION:Mae# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_230)
fast: false
reactant: 745369
product: 745417
reversible: false

745405
type: SpeciesReference
stoichiometry: 1.0
species: 539969

745393
type: SpeciesReference
stoichiometry: 1.0
species: 539673

745381
type: SpeciesReference
stoichiometry: 1.0
species: 539967

542852
type: LocalParameter
value: 0.0

542850
type: LocalParameter
value: 0.0

542849
type: LocalParameter
value: 999999.0

542847
type: LocalParameter
value: 0.0

745369
type: SpeciesReference
stoichiometry: 1.0
species: 539941

745417
type: SpeciesReference
stoichiometry: 1.0
species: 540038

541441
type: Reaction
notes: Abbreviation: R_URIK2 Synonyms: _0 EC Number: 2.7.1.48 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : gtp + uri --> gdp + h + ump Confidence Level: 2 genes: LOCUS:BPLAN_106#ABBREVIATION:udk#ECNUMBERS:2.7.1.48# proteins: NAME:uridine/cytidine kinase#ABBREVIATION:Udk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_106)
reversible: false
reactant: 757226
fast: false
product: 757250
product: 757238
name: uridine kinase (GTP:Uridine)
reactant: 757213
product: 757262
kinetic law: 757274

757226
type: SpeciesReference
stoichiometry: 1.0
species: 540119

757250
type: SpeciesReference
stoichiometry: 1.0
species: 539783

757238
type: SpeciesReference
stoichiometry: 1.0
species: 539754

757213
type: SpeciesReference
stoichiometry: 1.0
species: 539776

757262
type: SpeciesReference
stoichiometry: 1.0
species: 540114

544081
type: LocalParameter
value: 0.0

544079
type: LocalParameter
value: 0.0

544077
type: LocalParameter
value: 999999.0

544075
type: LocalParameter
value: 0.0

540496
type: Reaction
kinetic law: 737655
product: 737643
reactant: 737631
notes: Abbreviation: R_dhorSt Synonyms: _0 Equation: dhor-S[e] <==> dhor-S[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: S-Dihydroorotate transporter

542026
type: LocalParameter
value: 0.0

542025
type: LocalParameter
value: 0.0

542023
type: LocalParameter
value: 999999.0

542022
type: LocalParameter
value: -999999.0

737643
type: SpeciesReference
stoichiometry: 1.0
species: 539708

737631
type: SpeciesReference
stoichiometry: 1.0
species: 539709

540379
type: Reaction
reactant: 734775
product: 734860
product: 734872
reactant: 734787
product: 734823
notes: Abbreviation: R_C141SN Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : actACP + (16) h + (5) malACP + (11) nadph --> (5) ACP + (5) co2 + (6) h2o + (11) nadp + tdeACP Confidence Level: 2 tv genes: LOCUS:BPLAN_596#ABBREVIATION:fabZ#ECNUMBERS:4.2.1.-# LOCUS:none#ABBREVIATION:fabA#ECNUMBERS:4.2.1.60# LOCUS:BPLAN_294#ABBREVIATION:fabI#ECNUMBERS:1.3.1.9# LOCUS:BPLAN_576#ABBREVIATION:fabG#ECNUMBERS:1.1.1.100# LOCUS:BPLAN_555#ABBREVIATION:fabF#ECNUMBERS:2.3.1.179# LOCUS:BPLAN_524#ABBREVIATION:fabH#ECNUMBERS:2.3.1.41# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase#ABBREVIATION:FabH# NAME:_3-oxoacyl-[acyl-carrier-protein] synthase II#ABBREVIATION:FabF# NAME:_3-oxoacyl-ACP reductase#ABBREVIATION:FabG# NAME:Enoyl-(acyl-carrier-protein) reductase (NADH)#ABBREVIATION:FabI# NAME:beta-hydroxydecanoyl thioester dehydrase#ABBREVIATION:FabA# NAME:(3R)-hydroxymyriostoyl-(acyl carrier protein) dehydratase#ABBREVIATION:FabZ# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_596) and (BPLAN_294) and (BPLAN_576) and (BPLAN_555) or (BPLAN_524)
reactant: 734799
fast: false
name: Fatty acid biosynthesis (n-C14:1)
reactant: 734811
kinetic law: 734884
product: 734835
reversible: false
product: 734848

734775
type: SpeciesReference
stoichiometry: 1.0
species: 539605

734860
type: SpeciesReference
stoichiometry: 11.0
species: 539967

734872
type: SpeciesReference
stoichiometry: 1.0
species: 540081

734787
type: SpeciesReference
stoichiometry: 16.0
species: 539783

734823
type: SpeciesReference
stoichiometry: 5.0
species: 539601

734799
type: SpeciesReference
stoichiometry: 5.0
species: 539939

734811
type: SpeciesReference
stoichiometry: 11.0
species: 539969

541802
type: LocalParameter
value: 0.0

541801
type: LocalParameter
value: 0.0

541799
type: LocalParameter
value: 999999.0

541798
type: LocalParameter
value: 0.0

734835
type: SpeciesReference
stoichiometry: 5.0
species: 539673

734848
type: SpeciesReference
stoichiometry: 6.0
species: 539779

541384
type: Reaction
notes: Abbreviation: R_TYRt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: h[e] + tyr-L[e] <==> h[c] + tyr-L[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 755907
name: L-tyrosine reversible transport via proton symport
reactant: 755895
product: 755920
fast: false
kinetic law: 755944
reversible: true
product: 755932

755907
type: SpeciesReference
stoichiometry: 1.0
species: 540097

755895
type: SpeciesReference
stoichiometry: 1.0
species: 539784

755920
type: SpeciesReference
stoichiometry: 1.0
species: 539783

543948
type: LocalParameter
value: 0.0

543946
type: LocalParameter
value: 0.0

543944
type: LocalParameter
value: 999999.0

543942
type: LocalParameter
value: -999999.0

755932
type: SpeciesReference
stoichiometry: 1.0
species: 540096

540307
type: Reaction
kinetic law: 732586
product: 732574
reactant: 732562
notes: Abbreviation: R_ALAR Synonyms: _0 EC Number: 5.1.1.1 SUBSYSTEM: Alanine and Aspartate Metabolism Equation: [c] : ala-L <==> ala-D Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: alanine racemase

541658
type: LocalParameter
value: 0.0

541657
type: LocalParameter
value: 0.0

541655
type: LocalParameter
value: 999999.0

541654
type: LocalParameter
value: -999999.0

732574
type: SpeciesReference
stoichiometry: 1.0
species: 539626

732562
type: SpeciesReference
stoichiometry: 1.0
species: 539628

540364
type: Reaction
reactant: 733820
notes: Abbreviation: R_ATPS4r Synonyms: _0 EC Number: 3.6.3.14 SUBSYSTEM: Oxidative Phosphorylation Equation: adp[c] + (4) h[e] + pi[c] <==> atp[c] + (3) h[c] + h2o[c] Confidence Level: 2 JLR- added reversible form of ATPS4 reactioin genes: LOCUS:BPLAN_560#ABBREVIATION:atpC#ECNUMBERS:3.6.3.14# LOCUS:BPLAN_561#ABBREVIATION:atpD#ECNUMBERS:3.6.3.14# LOCUS:BPLAN_078#ABBREVIATION:atpG#ECNUMBERS:3.6.3.14# LOCUS:BPLAN_077#ABBREVIATION:atpA#ECNUMBERS:3.6.3.14# LOCUS:BPLAN_076#ABBREVIATION:atpH#ECNUMBERS:3.6.3.14# LOCUS:BPLAN_075#ABBREVIATION:atpF#ECNUMBERS:3.6.3.14# LOCUS:BPLAN_074#ABBREVIATION:atpE#ECNUMBERS:3.6.3.14# LOCUS:BPLAN_073#ABBREVIATION:atpB#ECNUMBERS:3.6.3.14# proteins: NAME:ATP synthase F1#ABBREVIATION:AtpF1# NAME:ATP synthase F0#ABBREVIATION:AtpF0# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_074 and BPLAN_075 and BPLAN_073) and (BPLAN_076 and BPLAN_077 and BPLAN_078 and BPLAN_561 and BPLAN_560)
reactant: 733844
fast: false
product: 733881
name: ATP synthase (four protons for one ATP)
reversible: true
product: 733868
reactant: 733832
kinetic law: 733893
product: 733856

733820
type: SpeciesReference
stoichiometry: 1.0
species: 539611

733844
type: SpeciesReference
stoichiometry: 1.0
species: 540013

733881
type: SpeciesReference
stoichiometry: 1.0
species: 539779

733868
type: SpeciesReference
stoichiometry: 3.0
species: 539783

733832
type: SpeciesReference
stoichiometry: 4.0
species: 539784

541772
type: LocalParameter
value: 0.0

541771
type: LocalParameter
value: 0.0

541769
type: LocalParameter
value: 999999.0

541768
type: LocalParameter
value: -999999.0

733856
type: SpeciesReference
stoichiometry: 1.0
species: 539659

541054
type: Reaction
product: 748683
notes: Abbreviation: R_NTPP7 Synonyms: _0 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dttp + h2o --> dtmp + h + ppi Confidence Level: 2 JLR genes: LOCUS:BPLAN_237#ABBREVIATION:mazG# proteins: NAME:Nucleotide triphosphate pyrophosphohydrolase#ABBREVIATION:MazG# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_237)
product: 748695
product: 748671
fast: false
name: Nucleoside triphosphate pyrophosphorylase (dttp)
reversible: false
kinetic law: 748707
reactant: 748646
reactant: 748659

748683
type: SpeciesReference
stoichiometry: 1.0
species: 539783

748695
type: SpeciesReference
stoichiometry: 1.0
species: 540021

748671
type: SpeciesReference
stoichiometry: 1.0
species: 539719

543178
type: LocalParameter
value: 0.0

543176
type: LocalParameter
value: 0.0

543174
type: LocalParameter
value: 999999.0

543172
type: LocalParameter
value: 0.0

748646
type: SpeciesReference
stoichiometry: 1.0
species: 539720

748659
type: SpeciesReference
stoichiometry: 1.0
species: 539779

541159
type: Reaction
fast: false
reactant: 750967
product: 751003
reversible: false
notes: Abbreviation: R_PPND Synonyms: _0 EC Number: 1.3.1.12 SUBSYSTEM: Tyrosine, Tryptophan, and Phenylalanine Metabolism Equation: [c] : nad + pphn --> 34hpp + co2 + nadh Confidence Level: 2 genes: LOCUS:BPLAN_297#ABBREVIATION:tyrA#ECNUMBERS:5.4.99.5,-!-,1.3.1.12# proteins: NAME:Chorismate mutase T#ABBREVIATION:TyrA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_297)
product: 750991
kinetic law: 751015
product: 750979
name: prephenate dehydrogenase
reactant: 750955

750967
type: SpeciesReference
stoichiometry: 1.0
species: 540019

751003
type: SpeciesReference
stoichiometry: 1.0
species: 539966

750991
type: SpeciesReference
stoichiometry: 1.0
species: 539673

543423
type: LocalParameter
value: 0.0

543421
type: LocalParameter
value: 0.0

543419
type: LocalParameter
value: 999999.0

543417
type: LocalParameter
value: 0.0

750979
type: SpeciesReference
stoichiometry: 1.0
species: 539521

750955
type: SpeciesReference
stoichiometry: 1.0
species: 539964

540655
type: Reaction
kinetic law: 740068
product: 740056
reactant: 740044
notes: Abbreviation: R_EX_ppbng_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : ppbng <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Porphobilinogen exchange

542344
type: LocalParameter
value: 0.0

542343
type: LocalParameter
value: 0.0

542341
type: LocalParameter
value: 999999.0

542340
type: LocalParameter
value: -999999.0

740056
type: SpeciesReference
stoichiometry: 1.0
species: 540183

540183
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 539477
name: Porphobilinogen_C10H13N2O4

740044
type: SpeciesReference
stoichiometry: 1.0
species: 540018

540961
type: Reaction
reactant: 746724
reactant: 746712
fast: false
kinetic law: 746760
reversible: true
product: 746748
product: 746736
name: sodium proton antiporter (H:NA is 1:1)
notes: Abbreviation: R_NAt3_1 Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: h[e] + na1[c] <==> h[c] + na1[e] Confidence Level: 1 JLR genes: none proteins: none citations: none GENE ASSOCIATION:

746724
type: SpeciesReference
stoichiometry: 1.0
species: 539958

746712
type: SpeciesReference
stoichiometry: 1.0
species: 539784

542964
type: LocalParameter
value: 0.0

542962
type: LocalParameter
value: 0.0

542960
type: LocalParameter
value: 999999.0

542958
type: LocalParameter
value: -999999.0

746748
type: SpeciesReference
stoichiometry: 1.0
species: 539959

746736
type: SpeciesReference
stoichiometry: 1.0
species: 539783

540574
type: Reaction
kinetic law: 739089
product: 739077
reactant: 739064
notes: Abbreviation: R_EX_fe2_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : fe2 <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: Fe2+ exchange

542182
type: LocalParameter
value: 0.0

542181
type: LocalParameter
value: 0.0

542179
type: LocalParameter
value: 999999.0

542178
type: LocalParameter
value: -999999.0

739077
type: SpeciesReference
stoichiometry: 1.0
species: 540139

739064
type: SpeciesReference
stoichiometry: 1.0
species: 539736

540589
type: Reaction
kinetic law: 739269
product: 739257
reactant: 739245
notes: Abbreviation: R_EX_glu_L_LPAREN_e_RPAREN_ Synonyms: _0 Equation: [e] : glu-L <==> Confidence Level: genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
reversible: true
name: L-Glutamate exchange

542212
type: LocalParameter
value: 0.0

542211
type: LocalParameter
value: 0.0

542209
type: LocalParameter
value: 999999.0

542208
type: LocalParameter
value: 0.0

739257
type: SpeciesReference
stoichiometry: 1.0
species: 540145

739245
type: SpeciesReference
stoichiometry: 1.0
species: 539761

540946
type: Reaction
fast: false
product: 746324
reversible: false
name: NADH dehydrogenase (demethylmenaquinone-8 & 2.8 protons)
reactant: 746276
reactant: 746288
reactant: 746300
kinetic law: 746348
product: 746336
product: 746312
notes: Abbreviation: R_NADH8 Synonyms: _0 EC Number: 1.6.5.3 SUBSYSTEM: Oxidative Phosphorylation Equation: _2dmmq8[c] + (3.8) h[c] + nadh[c] --> 2dmmql8[c] + (2.8) h[e] + nad[c] Confidence Level: 2 JLR genes: LOCUS:BPLAN_442#ABBREVIATION:ndh#ECNUMBERS:1.16.1.-,-!-,1.6.99.3# proteins: NAME:NADH dehydrogenase II#ABBREVIATION:Ndh# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_442)

746324
type: SpeciesReference
stoichiometry: 2.8
species: 539784

746276
type: SpeciesReference
stoichiometry: 1.0
species: 539504

746288
type: SpeciesReference
stoichiometry: 3.8
species: 539783

746300
type: SpeciesReference
stoichiometry: 1.0
species: 539966

542931
type: LocalParameter
value: 0.0

542929
type: LocalParameter
value: 0.0

542928
type: LocalParameter
value: 999999.0

542926
type: LocalParameter
value: 0.0

746336
type: SpeciesReference
stoichiometry: 1.0
species: 539964

746312
type: SpeciesReference
stoichiometry: 1.0
species: 539506

541144
type: Reaction
product: 750653
reactant: 750628
fast: false
notes: Abbreviation: R_PPA Synonyms: _3 EC Number: 3.6.1.1 SUBSYSTEM: Anaplerotic reactions Equation: [c] : h2o + ppi --> h + (2) pi Confidence Level: 2 genes: LOCUS:BPLAN_004#ABBREVIATION:ppa#ECNUMBERS:3.6.1.1# proteins: NAME:inorganic pyrophosphatase#ABBREVIATION:Ppa# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_004)
kinetic law: 750677
reversible: false
name: inorganic diphosphatase
product: 750665
reactant: 750640

750653
type: SpeciesReference
stoichiometry: 1.0
species: 539783

750628
type: SpeciesReference
stoichiometry: 1.0
species: 539779

543388
type: LocalParameter
value: 0.0

543386
type: LocalParameter
value: 0.0

543384
type: LocalParameter
value: 999999.0

543382
type: LocalParameter
value: 0.0

750665
type: SpeciesReference
stoichiometry: 2.0
species: 540013

750640
type: SpeciesReference
stoichiometry: 1.0
species: 540021

541333
type: Reaction
reversible: false
notes: Abbreviation: R_THMabc Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: atp[c] + h2o[c] + thm[e] --> adp[c] + h[c] + pi[c] + thm[c] Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
reactant: 754776
product: 754812
name: thiamine transport via ABC system
kinetic law: 754860
fast: false
product: 754836
reactant: 754788
reactant: 754800
product: 754824
product: 754848

754776
type: SpeciesReference
stoichiometry: 1.0
species: 539659

754812
type: SpeciesReference
stoichiometry: 1.0
species: 539611

543829
type: LocalParameter
value: 0.0

543827
type: LocalParameter
value: 0.0

543825
type: LocalParameter
value: 999999.0

543823
type: LocalParameter
value: 0.0

754836
type: SpeciesReference
stoichiometry: 1.0
species: 540013

754788
type: SpeciesReference
stoichiometry: 1.0
species: 539779

754800
type: SpeciesReference
stoichiometry: 1.0
species: 540085

754824
type: SpeciesReference
stoichiometry: 1.0
species: 539783

754848
type: SpeciesReference
stoichiometry: 1.0
species: 540084

540976
type: Reaction
name: nucleoside-diphosphate kinase (ATP:dGDP)
reversible: true
reactant: 747028
reactant: 747016
kinetic law: 747064
fast: false
notes: Abbreviation: R_NDPK5 Synonyms: _0 EC Number: 2.7.4.6 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : atp + dgdp <==> adp + dgtp Confidence Level: 2 Many nucleoside diphosphates (eight described) can act as acceptors. While many ribo- and deoxyribonucleoside triphosphates can act as donors, only ATP is chosen as a donor to minimize the number of total reactions. genes: LOCUS:BPLAN_187#ABBREVIATION:ndk#ECNUMBERS:2.7.4.6# proteins: NAME:nucleoside diphosphate kinase#ABBREVIATION:Ndk# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_187)
product: 747052
product: 747040

747028
type: SpeciesReference
stoichiometry: 1.0
species: 539698

747016
type: SpeciesReference
stoichiometry: 1.0
species: 539659

542998
type: LocalParameter
value: 0.0

542996
type: LocalParameter
value: 0.0

542994
type: LocalParameter
value: 999999.0

542992
type: LocalParameter
value: -999999.0

747052
type: SpeciesReference
stoichiometry: 1.0
species: 539701

747040
type: SpeciesReference
stoichiometry: 1.0
species: 539611

540859
type: Reaction
kinetic law: 744219
product: 744207
product: 744195
reactant: 744183
notes: Abbreviation: R_IPPMIa Synonyms: _0 EC Number: 4.2.1.33 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : 2ippm + h2o <==> 3c2hmp Confidence Level: 2 genes: LOCUS:BPLAN_565#ABBREVIATION:leuD#ECNUMBERS:4.2.1.33,-!-,4.2.1.35# LOCUS:BPLAN_566#ABBREVIATION:leuC#ECNUMBERS:4.2.1.33# proteins: NAME:Isopropylmalate isomerase small subunit#ABBREVIATION:LeuC# NAME:Isopropylmalate isomerase large subunit#ABBREVIATION:LeuD# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_566 and BPLAN_565)
fast: false
reversible: true
name: _3-isopropylmalate dehydratase

542756
type: LocalParameter
value: 0.0

542754
type: LocalParameter
value: 0.0

542753
type: LocalParameter
value: 999999.0

542751
type: LocalParameter
value: -999999.0

744207
type: SpeciesReference
stoichiometry: 1.0
species: 539779

744195
type: SpeciesReference
stoichiometry: 1.0
species: 539510

744183
type: SpeciesReference
stoichiometry: 1.0
species: 539522

540457
type: Reaction
reactant: 736760
fast: false
product: 736796
reactant: 736772
reversible: true
name: _dCMP deaminase
notes: Abbreviation: R_DCMPDA Synonyms: _1 EC Number: 3.5.4.12 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : dcmp + h + h2o <==> dump + nh4 Confidence Level: 2 genes: LOCUS:BPLAN_134#ABBREVIATION:comEB#ECNUMBERS:3.5.4.12# proteins: NAME:dCMP deaminase#ABBREVIATION:ComEB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_134)
kinetic law: 736820
reactant: 736784
product: 736808

736760
type: SpeciesReference
stoichiometry: 1.0
species: 539694

736796
type: SpeciesReference
stoichiometry: 1.0
species: 539722

736772
type: SpeciesReference
stoichiometry: 1.0
species: 539783

541954
type: LocalParameter
value: 0.0

541952
type: LocalParameter
value: 0.0

541951
type: LocalParameter
value: 999999.0

541949
type: LocalParameter
value: -999999.0

736784
type: SpeciesReference
stoichiometry: 1.0
species: 539779

736808
type: SpeciesReference
stoichiometry: 1.0
species: 539970

540271
type: Reaction
kinetic law: 731765
product: 731753
product: 731741
reactant: 731729
notes: Abbreviation: R_ADSL1r Synonyms: _0 EC Number: 4.3.2.2 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : dcamp --> amp + fum Confidence Level: 2 JLR- added reversible form of ADSL1 genes: LOCUS:BPLAN_152#ABBREVIATION:purB#ECNUMBERS:4.3.2.2# proteins: NAME:Adenylosuccinate lyase#ABBREVIATION:PurB# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_152)
fast: false
reversible: false
name: adenylsuccinate lyase

541587
type: LocalParameter
value: 0.0

541585
type: LocalParameter
value: 0.0

541584
type: LocalParameter
value: 999999.0

541582
type: LocalParameter
value: 0.0

731753
type: SpeciesReference
stoichiometry: 1.0
species: 539747

731741
type: SpeciesReference
stoichiometry: 1.0
species: 539638

731729
type: SpeciesReference
stoichiometry: 1.0
species: 539691

540709
type: Reaction
kinetic law: 740887
product: 740875
reactant: 740863
notes: Abbreviation: R_FRUt1r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: fru[e] <==> fru[c] Confidence Level: 2 genes: LOCUS:BPLAN_437 proteins: NAME:ABC transporter, ATP-binding and permease protein citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_437)
fast: false
reversible: true
name: D-fructose transport in via uniport

542452
type: LocalParameter
value: 0.0

542451
type: LocalParameter
value: 0.0

542449
type: LocalParameter
value: 999999.0

542448
type: LocalParameter
value: -999999.0

740875
type: SpeciesReference
stoichiometry: 1.0
species: 539744

740863
type: SpeciesReference
stoichiometry: 1.0
species: 539746

540763
type: Reaction
product: 742115
product: 742103
product: 742127
notes: Abbreviation: R_GLYCL Synonyms: _0 SUBSYSTEM: Folate Metabolism Equation: [c] : gly + nad + thf --> co2 + mlthf + nadh + nh4 Confidence Level: 2 genes: LOCUS:BPLAN_486#ABBREVIATION:lpd#ECNUMBERS:1.8.1.4# LOCUS:BPLAN_025#ABBREVIATION:gcvP#ECNUMBERS:1.4.4.2# LOCUS:BPLAN_223#ABBREVIATION:gcvH# LOCUS:BPLAN_447#ABBREVIATION:gcvT#ECNUMBERS:2.1.2.10# proteins: NAME:Glycine cleavage complex, T#ABBREVIATION:GcvT# NAME:glycine cleavage complex, H#ABBREVIATION:GcvH# NAME:Glycine cleavage complex, P#ABBREVIATION:GcvP# NAME:dihydrolipoamide dehydrogenase#ABBREVIATION:LpdA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_486) and (BPLAN_025) and (BPLAN_447) and (BPLAN_223)
reactant: 742054
kinetic law: 742139
reactant: 742078
product: 742091
name: Glycine Cleavage System
reactant: 742066
fast: false
reversible: false

742115
type: SpeciesReference
stoichiometry: 1.0
species: 539966

742103
type: SpeciesReference
stoichiometry: 1.0
species: 539952

742127
type: SpeciesReference
stoichiometry: 1.0
species: 539970

742054
type: SpeciesReference
stoichiometry: 1.0
species: 539762

542560
type: LocalParameter
value: 0.0

542558
type: LocalParameter
value: 0.0

542557
type: LocalParameter
value: 999999.0

542555
type: LocalParameter
value: 0.0

742078
type: SpeciesReference
stoichiometry: 1.0
species: 540083

742091
type: SpeciesReference
stoichiometry: 1.0
species: 539673

742066
type: SpeciesReference
stoichiometry: 1.0
species: 539964

541174
type: Reaction
product: 751330
product: 751342
reactant: 751306
product: 751354
kinetic law: 751366
fast: false
name: phosphoribosylaminoimidazole synthase
reversible: false
notes: Abbreviation: R_PRAIS Synonyms: _0 EC Number: 6.3.3.1 SUBSYSTEM: Purine and Pyrimidine Biosynthesis Equation: [c] : atp + fpram --> adp + air + (2) h + pi Confidence Level: 2 genes: LOCUS:BPLAN_157#ABBREVIATION:purM#ECNUMBERS:6.3.3.1# proteins: NAME:phosphoribosylaminoimidazole synthetase#ABBREVIATION:PurM# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_157)
product: 751318
reactant: 751294

751330
type: SpeciesReference
stoichiometry: 1.0
species: 539620

751342
type: SpeciesReference
stoichiometry: 2.0
species: 539783

751306
type: SpeciesReference
stoichiometry: 1.0
species: 539741

751354
type: SpeciesReference
stoichiometry: 1.0
species: 540013

543458
type: LocalParameter
value: 0.0

543456
type: LocalParameter
value: 0.0

543454
type: LocalParameter
value: 999999.0

543452
type: LocalParameter
value: 0.0

751318
type: SpeciesReference
stoichiometry: 1.0
species: 539611

751294
type: SpeciesReference
stoichiometry: 1.0
species: 539659

541069
type: Reaction
notes: Abbreviation: R_OCBT Synonyms: _0 EC Number: 2.1.3.3 SUBSYSTEM: Arginine and Proline Metabolism Equation: [c] : cbp + orn --> citr-L + h + pi Confidence Level: 2 genes: LOCUS:BPLAN_322#ABBREVIATION:argF#ECNUMBERS:2.1.3.3# proteins: NAME:Ornithine carbamoyl transferase II#ABBREVIATION:ArgF# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_322)
product: 748991
reactant: 748965
product: 749004
reactant: 748951
name: ornithine carbamoyltransferase
kinetic law: 749017
fast: false
product: 748978
reversible: false

748991
type: SpeciesReference
stoichiometry: 1.0
species: 539783

748965
type: SpeciesReference
stoichiometry: 1.0
species: 539990

749004
type: SpeciesReference
stoichiometry: 1.0
species: 540013

748951
type: SpeciesReference
stoichiometry: 1.0
species: 539661

543213
type: LocalParameter
value: 0.0

543211
type: LocalParameter
value: 0.0

543209
type: LocalParameter
value: 999999.0

543207
type: LocalParameter
value: 0.0

748978
type: SpeciesReference
stoichiometry: 1.0
species: 539669

540844
type: Reaction
kinetic law: 743929
reversible: true
product: 743916
reactant: 743892
notes: Abbreviation: R_ILETA Synonyms: _0 EC Number: 2.6.1.42 SUBSYSTEM: Valine, Leucine, and Isoleucine Metabolism Equation: [c] : akg + ile-L <==> 3mop + glu-L Confidence Level: 2 genes: LOCUS:BPLAN_185#ABBREVIATION:ilvE#ECNUMBERS:2.6.1.42,-!-,2.6.1.2# proteins: NAME:Branched-chain-amino-acid aminotransferase#ABBREVIATION:IlvE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_185)
fast: false
reactant: 743880
name: isoleucine transaminase
product: 743904

542726
type: LocalParameter
value: 0.0

542724
type: LocalParameter
value: 0.0

542722
type: LocalParameter
value: 999999.0

542720
type: LocalParameter
value: -999999.0

743916
type: SpeciesReference
stoichiometry: 1.0
species: 539760

743892
type: SpeciesReference
stoichiometry: 1.0
species: 539914

743880
type: SpeciesReference
stoichiometry: 1.0
species: 539622

743904
type: SpeciesReference
stoichiometry: 1.0
species: 539538

541393
type: Reaction
reversible: true
fast: false
kinetic law: 756164
name: UDP-N-acetylglucosamine acyltransferase
product: 756140
reactant: 756128
notes: Abbreviation: R_UAGAAT Synonyms: _0 EC Number: 2.3.1.129 SUBSYSTEM: Cell Envelope Biosynthesis Equation: [c] : 3hmrsACP + uacgam <==> ACP + u3aga Confidence Level: 1 JLR- NH page 1041 genes: none proteins: none citations: none GENE ASSOCIATION:
product: 756152
reactant: 756115

543969
type: LocalParameter
value: 0.0

543967
type: LocalParameter
value: 0.0

543965
type: LocalParameter
value: 999999.0

543963
type: LocalParameter
value: -999999.0

756140
type: SpeciesReference
stoichiometry: 1.0
species: 539601

756128
type: SpeciesReference
stoichiometry: 1.0
species: 540103

756152
type: SpeciesReference
stoichiometry: 1.0
species: 540098

756115
type: SpeciesReference
stoichiometry: 1.0
species: 539532

540298
type: Reaction
product: 732387
product: 732361
product: 732374
fast: false
reactant: 732335
reactant: 732348
kinetic law: 732400
notes: Abbreviation: R_AKGDH Synonyms: _0 SUBSYSTEM: Citric Acid Cycle Equation: [c] : akg + coa + nad --> co2 + nadh + succoa Confidence Level: 2 Changed from TEST_AKGDH genes: LOCUS:BPLAN_486#ABBREVIATION:lpd#ECNUMBERS:1.8.1.4# LOCUS:BPLAN_421#ABBREVIATION:lpd#ECNUMBERS:1.8.1.4# LOCUS:BPLAN_044#ABBREVIATION:sucA#ECNUMBERS:1.2.4.2# LOCUS:BPLAN_045#ABBREVIATION:sucB#ECNUMBERS:2.3.1.61# LOCUS:BPLAN_005#ABBREVIATION:sucB#ECNUMBERS:2.3.1.61# proteins: NAME:a-ketoglutarate, B#ABBREVIATION:SucB# NAME:a-ketoglutarate, B#ABBREVIATION:SucB# NAME:a-ketoglutarate dehydrogenase, A#ABBREVIATION:SucA# NAME:dihydrolipoamide dehydrogenase#ABBREVIATION:LpdA# NAME:dihydrolipoamide dehydrogenase#ABBREVIATION:LpdA# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_045) or (BPLAN_005) and (BPLAN_486) or (BPLAN_421) and (BPLAN_044)
reversible: false
reactant: 732323
name: _2-Oxogluterate dehydrogenase

732387
type: SpeciesReference
stoichiometry: 1.0
species: 540078

732361
type: SpeciesReference
stoichiometry: 1.0
species: 539673

732374
type: SpeciesReference
stoichiometry: 1.0
species: 539966

732335
type: SpeciesReference
stoichiometry: 1.0
species: 539677

732348
type: SpeciesReference
stoichiometry: 1.0
species: 539964

541640
type: LocalParameter
value: 0.0

541639
type: LocalParameter
value: 0.0

541637
type: LocalParameter
value: 999999.0

541636
type: LocalParameter
value: 0.0

732323
type: SpeciesReference
stoichiometry: 1.0
species: 539622

541243
type: Reaction
reactant: 752854
reversible: false
notes: Abbreviation: R_PYDXPP Synonyms: _0 SUBSYSTEM: Cofactor and Prosthetic Group Biosynthesis Equation: [c] : h2o + pydx5p --> pi + pydx Confidence Level: 1 genes: none proteins: none citations: none GENE ASSOCIATION:
fast: false
kinetic law: 752902
product: 752878
reactant: 752866
product: 752890
name: Pyridoxal 5-phosphate phosphatase

752854
type: SpeciesReference
stoichiometry: 1.0
species: 539779

543619
type: LocalParameter
value: 0.0

543617
type: LocalParameter
value: 0.0

543615
type: LocalParameter
value: 999999.0

543613
type: LocalParameter
value: 0.0

752878
type: SpeciesReference
stoichiometry: 1.0
species: 540013

752866
type: SpeciesReference
stoichiometry: 1.0
species: 540036

752890
type: SpeciesReference
stoichiometry: 1.0
species: 540037

540373
type: Reaction
product: 734629
reversible: false
fast: false
product: 734617
reactant: 734568
notes: Abbreviation: R_C120SN Synonyms: _0 SUBSYSTEM: Membrane Lipid Metabolism Equation: [c] : actACP + (14) h + (4) malACP + (10) nadph --> (4) ACP + (4) co2 + ddcaACP + (5) h2o + (10) nadp Confidence Level: 2 TV, JRNeidhard pg. 615 genes: LOCUS:BPLAN_596#ABBREVIATION:fabZ#ECNUMBERS:4.2.1.-# LOCUS:BPLAN_294#ABBREVIATION:fabI#ECNUMBERS:1.3.1.9# LOCUS:BPLAN_576#ABBREVIATION:fabG#ECNUMBERS:1.1.1.100# LOCUS:BPLAN_555#ABBREVIATION:fabF#ECNUMBERS:2.3.1.179# proteins: NAME:_3-oxoacyl-[acyl-carrier-protein] synthase II#ABBREVIATION:FabF# NAME:_3-oxoacyl-ACP reductase#ABBREVIATION:FabG# NAME:Enoyl-(acyl-carrier-protein) reductase (NADH)#ABBREVIATION:FabI# NAME:(3R)-hydroxymyriostoyl-(acyl carrier protein) dehydratase#ABBREVIATION:FabZ# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_596) and (BPLAN_555) and (BPLAN_294) and (BPLAN_576)
reactant: 734532
reactant: 734556
product: 734592
product: 734580
name: Fatty acid biosynthesis (n-C12:0)
kinetic law: 734641
reactant: 734544
product: 734604

734629
type: SpeciesReference
stoichiometry: 10.0
species: 539967

734617
type: SpeciesReference
stoichiometry: 5.0
species: 539779

734568
type: SpeciesReference
stoichiometry: 10.0
species: 539969

734532
type: SpeciesReference
stoichiometry: 1.0
species: 539605

734556
type: SpeciesReference
stoichiometry: 4.0
species: 539939

734592
type: SpeciesReference
stoichiometry: 4.0
species: 539673

734580
type: SpeciesReference
stoichiometry: 4.0
species: 539601

541790
type: LocalParameter
value: 0.0

541789
type: LocalParameter
value: 0.0

541787
type: LocalParameter
value: 999999.0

541786
type: LocalParameter
value: 0.0

734544
type: SpeciesReference
stoichiometry: 14.0
species: 539783

734604
type: SpeciesReference
stoichiometry: 1.0
species: 539697

540301
type: Reaction
product: 732439
fast: false
notes: Abbreviation: R_AKGt2r Synonyms: _0 SUBSYSTEM: Transport, Extracellular Equation: akg[e] + h[e] <==> akg[c] + h[c] Confidence Level: 1 NCD genes: none proteins: none citations: none GENE ASSOCIATION:
name: _2-oxoglutarate reversible transport via symport
kinetic law: 732465
product: 732452
reversible: true
reactant: 732413
reactant: 732426

732439
type: SpeciesReference
stoichiometry: 1.0
species: 539622

541646
type: LocalParameter
value: 0.0

541645
type: LocalParameter
value: 0.0

541643
type: LocalParameter
value: 999999.0

541642
type: LocalParameter
value: -999999.0

732452
type: SpeciesReference
stoichiometry: 1.0
species: 539783

732413
type: SpeciesReference
stoichiometry: 1.0
species: 539624

732426
type: SpeciesReference
stoichiometry: 1.0
species: 539784

541258
type: Reaction
kinetic law: 753228
name: ribonucleoside-diphosphate reductase (ADP)
product: 753216
reactant: 753168
notes: Abbreviation: R_RNDR1 Synonyms: _0 EC Number: 1.17.4.1 SUBSYSTEM: Nucleotide Salvage Pathway Equation: [c] : adp + trdrd --> dadp + h2o + trdox Confidence Level: 2 genes: LOCUS:BPLAN_330#ABBREVIATION:nrdE#ECNUMBERS:1.17.4.1# LOCUS:BPLAN_p004#ABBREVIATION:nrdF#ECNUMBERS:1.17.4.1# proteins: NAME:Ribonucleoside diphosphate reductase subunit alpha#ABBREVIATION:NrdE# NAME:ribonucleotide-diphosphate reductase beta subunit#ABBREVIATION:NrdE# citations: AUTHORS:Sabree, Z.L., Kambhampati, S., Moran, N.A.#TITLE:Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.#JOURNAL:Proc Natl Acad Sci U S A.#YEAR:2009#PUBMED: 19880743# GENE ASSOCIATION: (BPLAN_330 and BPLAN_p004)
reactant: 753180
product: 753204
product: 753192
fast: false
reversible: false

543654
type: LocalParameter
value: 0.0

543652
type: LocalParameter
value: 0.0

543650
type: LocalParameter
value: 999999.0

543648
type: LocalParameter
value: 0.0

753216
type: SpeciesReference
stoichiometry: 1.0
species: 540092

753168
type: SpeciesReference
stoichiometry: 1.0
species: 539611

753180
type: SpeciesReference
stoichiometry: 1.0
species: 540093

753204
type: SpeciesReference
stoichiometry: 1.0
species: 539779

753192
type: SpeciesReference
stoichiometry: 1.0
species: 539687