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type: SpeciesReference
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species: 023912

023912
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Cytosine_

343272
type: SpeciesReference
stoichiometry: 1.0
species: 023909

023909
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Cytosine_

343284
type: SpeciesReference
stoichiometry: 1.0
species: 024329

343260
type: SpeciesReference
stoichiometry: 1.0
species: 024332

025787
type: Reaction
reversible: false
product: 353288
kinetic law: 353300
product: 353276
reactant: 353252
notes: GENE_ASSOCIATION: lp_0226 PROTEIN_ASSOCIATION: Gnp SUBSYSTEM: S_ PROTEIN_CLASS: 3.5.99.6
fast: false
name: R_glucosamine_6_phosphate_deaminase
reactant: 353264

353288
type: SpeciesReference
stoichiometry: 1.0
species: 024599

024599
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Ammonium_

028523
type: LocalParameter
value: -1.0

028522
type: LocalParameter
units: 333928
value: 0.0

028521
type: LocalParameter
value: 0.0

028520
type: LocalParameter
units: 333928
value: 999999.0

028519
type: LocalParameter
units: 333928
value: 0.0

353276
type: SpeciesReference
stoichiometry: 1.0
species: 024095

024095
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Fructose_6_phosphate_

353252
type: SpeciesReference
stoichiometry: 1.0
species: 024194

024194
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Glucosamine_6_phosphate_

353264
type: SpeciesReference
stoichiometry: 1.0
species: 024320

025700
type: Reaction
kinetic law: 349796
product: 349784
reactant: 349772
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_imidazole_lactate_exchange

028028
type: LocalParameter
value: -2.7

028027
type: LocalParameter
units: 333928
value: 0.0

028026
type: LocalParameter
value: 0.0

028025
type: LocalParameter
units: 333928
value: 999999.0

028023
type: LocalParameter
units: 333928
value: 0.0

349784
type: SpeciesReference
stoichiometry: 1.0
species: 025345

025345
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_imidazole_lactate_

349772
type: SpeciesReference
stoichiometry: 1.0
species: 024404

024404
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_imidazole_lactate_

025670
type: Reaction
kinetic law: 348780
product: 348768
reactant: 348756
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Cysteine_exchange

027850
type: LocalParameter
value: 6.2

027849
type: LocalParameter
units: 333928
value: -8.61E-4

027848
type: LocalParameter
value: 0.0

027846
type: LocalParameter
units: 333928
value: -8.61E-4

027845
type: LocalParameter
units: 333928
value: -0.001053

348768
type: SpeciesReference
stoichiometry: 1.0
species: 025271

025271
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Cysteine_

348756
type: SpeciesReference
stoichiometry: 1.0
species: 023921

023921
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Cysteine_

024632
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Octanoyl_acyl_carrier_protein_

025781
type: Reaction
kinetic law: 352962
fast: false
reversible: false
reactant: 352900
reactant: 352925
name: R_glycerol_3_phosphate_cytidylyltransferase
product: 352949
product: 352937
notes: GENE_ASSOCIATION: ( lp_0267 or lp_1248 ) PROTEIN_ASSOCIATION: ( TagD1 ) or ( TagD2 ) SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.7.39
reactant: 352912

028491
type: LocalParameter
value: 0.0

028490
type: LocalParameter
units: 333928
value: 6.0E-6

028488
type: LocalParameter
value: 0.0

028487
type: LocalParameter
units: 333928
value: 999999.0

028486
type: LocalParameter
units: 333928
value: 0.0

352900
type: SpeciesReference
stoichiometry: 1.0
species: 023915

023915
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_CTP_

352925
type: SpeciesReference
stoichiometry: 1.0
species: 024329

352949
type: SpeciesReference
stoichiometry: 1.0
species: 024734

352937
type: SpeciesReference
stoichiometry: 1.0
species: 023864

023864
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_CDPglycerol_

352912
type: SpeciesReference
stoichiometry: 1.0
species: 024266

024266
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_sn_Glycerol_3_phosphate_

025827
type: Reaction
reactant: 355825
fast: false
product: 355861
kinetic law: 355873
reversible: false
product: 355849
notes: GENE_ASSOCIATION: lp_2818 PROTEIN_ASSOCIATION: Lp_2818 SUBSYSTEM: S_Transport PROTEIN_CLASS:
name: R_L_glutamate_transport_in_via_proton_symport
reactant: 355837

355825
type: SpeciesReference
stoichiometry: 1.0
species: 024242

024242
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Glutamate_

355861
type: SpeciesReference
stoichiometry: 1.0
species: 024329

028715
type: LocalParameter
value: 0.0

028714
type: LocalParameter
units: 333928
value: 0.001302

028713
type: LocalParameter
value: 0.0

028712
type: LocalParameter
units: 333928
value: 999999.0

028711
type: LocalParameter
units: 333928
value: 0.0

355849
type: SpeciesReference
stoichiometry: 1.0
species: 024239

024239
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Glutamate_

355837
type: SpeciesReference
stoichiometry: 1.0
species: 024332

023975
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_dGDP_

025443
type: Reaction
kinetic law: 335490
product: 335478
reactant: 335466
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_acetaldehyde_reversible_transport

026542
type: LocalParameter
value: 0.0

026541
type: LocalParameter
units: 333928
value: -4.94E-4

026540
type: LocalParameter
value: 0.0

026539
type: LocalParameter
units: 333928
value: 999999.0

026537
type: LocalParameter
units: 333928
value: -999999.0

335478
type: SpeciesReference
stoichiometry: 1.0
species: 023630

023630
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Acetaldehyde_

335466
type: SpeciesReference
stoichiometry: 1.0
species: 023633

023633
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Acetaldehyde_

024695
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Phenol_

025665
type: Reaction
kinetic law: 348634
product: 348622
reactant: 348610
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Choline_exchange

027826
type: LocalParameter
value: 0.0

027825
type: LocalParameter
units: 333928
value: 0.0

027824
type: LocalParameter
value: 0.0

027823
type: LocalParameter
units: 333928
value: 999999.0

027821
type: LocalParameter
units: 333928
value: 0.0

348622
type: SpeciesReference
stoichiometry: 1.0
species: 025259

025259
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Choline_

348610
type: SpeciesReference
stoichiometry: 1.0
species: 023876

023876
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Choline_

026281
type: Reaction
kinetic law: 377655
product: 377643
product: 377631
reactant: 377619
notes: GENE_ASSOCIATION: lp_2776 PROTEIN_ASSOCIATION: DsdA SUBSYSTEM: S_ PROTEIN_CLASS: 4.3.1.18
fast: false
reversible: false
name: R_D_serine_deaminase

030718
type: LocalParameter
value: -3.033333

030717
type: LocalParameter
units: 333928
value: 0.0

030715
type: LocalParameter
value: 0.0

030714
type: LocalParameter
units: 333928
value: 999999.0

030713
type: LocalParameter
units: 333928
value: 0.0

377643
type: SpeciesReference
stoichiometry: 1.0
species: 024803

377631
type: SpeciesReference
stoichiometry: 1.0
species: 024599

377619
type: SpeciesReference
stoichiometry: 1.0
species: 024875

024875
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Serine_

024857
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Ribulose_5_phosphate_

025440
type: Reaction
kinetic law: 335320
reactant: 335272
fast: false
reversible: false
reactant: 335284
product: 335308
name: R_4_aminobutyrate_transaminase
product: 335296
notes: GENE_ASSOCIATION: lp_1721 PROTEIN_ASSOCIATION: GabT SUBSYSTEM: S_ PROTEIN_CLASS: 2.6.1.19

026525
type: LocalParameter
value: 0.0

026524
type: LocalParameter
units: 333928
value: 0.0

026523
type: LocalParameter
value: 0.0

026522
type: LocalParameter
units: 333928
value: 999999.0

026520
type: LocalParameter
units: 333928
value: 0.0

335272
type: SpeciesReference
stoichiometry: 1.0
species: 023465

023465
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_4_Aminobutanoate_

335284
type: SpeciesReference
stoichiometry: 1.0
species: 023741

023741
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_2_Oxoglutarate_

335308
type: SpeciesReference
stoichiometry: 1.0
species: 024932

024932
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Succinic_semialdehyde_

335296
type: SpeciesReference
stoichiometry: 1.0
species: 024239

025554
type: Reaction
reversible: true
notes: GENE_ASSOCIATION: lp_0594 PROTEIN_ASSOCIATION: MleP1 SUBSYSTEM: S_Transport PROTEIN_CLASS:
reactant: 342509
reactant: 342521
product: 342545
product: 342533
kinetic law: 342557
name: R_citrate_transport_inout_via_proton_symport
fast: false

342509
type: SpeciesReference
stoichiometry: 1.0
species: 023885

023885
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Citrate_

342521
type: SpeciesReference
stoichiometry: 1.0
species: 024332

342545
type: SpeciesReference
stoichiometry: 1.0
species: 024329

342533
type: SpeciesReference
stoichiometry: 1.0
species: 023882

023882
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Citrate_

027178
type: LocalParameter
value: 0.0

027176
type: LocalParameter
units: 333928
value: 0.011963

027175
type: LocalParameter
value: 0.0

027174
type: LocalParameter
units: 333928
value: 999999.0

027173
type: LocalParameter
units: 333928
value: -999999.0

025058
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Tyrosine_

026348
type: Reaction
kinetic law: 381309
product: 381297
reactant: 381285
notes: GENE_ASSOCIATION: lp_1173 PROTEIN_ASSOCIATION: Lp_1173 SUBSYSTEM: S_ PROTEIN_CLASS: 5.1.3.14
fast: false
reversible: true
name: R_UDP_N_acetylglucosamine_2_epimerase

031066
type: LocalParameter
value: 0.0

031064
type: LocalParameter
units: 333928
value: 6.0E-6

031063
type: LocalParameter
value: 0.0

031061
type: LocalParameter
units: 333928
value: 999999.0

031060
type: LocalParameter
units: 333928
value: -999999.0

381297
type: SpeciesReference
stoichiometry: 1.0
species: 025079

025079
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_UDP_N_acetyl_D_mannosamine_

381285
type: SpeciesReference
stoichiometry: 1.0
species: 025076

024254
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Glycine_

023317
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_2_phospho_4__cytidine_5__diphospho__2_C_methyl_D_erythritol_

026349
type: Reaction
reversible: false
name: R_UDP_N_acetylglucosamine_1_carboxyvinyltransferase
reactant: 381321
kinetic law: 381370
reactant: 381333
product: 381346
product: 381358
notes: GENE_ASSOCIATION: ( lp_2361 or lp_0510 ) PROTEIN_ASSOCIATION: ( MurA2 ) or ( MurA1 ) SUBSYSTEM: S_ PROTEIN_CLASS: 2.5.1.7
fast: false

381321
type: SpeciesReference
stoichiometry: 1.0
species: 024677

024677
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Phosphoenolpyruvate_

031072
type: LocalParameter
value: 0.0

031071
type: LocalParameter
units: 333928
value: 6.4E-5

031069
type: LocalParameter
value: 0.0

031068
type: LocalParameter
units: 333928
value: 999999.0

031067
type: LocalParameter
units: 333928
value: 0.0

381333
type: SpeciesReference
stoichiometry: 1.0
species: 025076

381346
type: SpeciesReference
stoichiometry: 1.0
species: 024713

381358
type: SpeciesReference
stoichiometry: 1.0
species: 025073

025073
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_UDP_N_acetyl_3_O__1_carboxyvinyl__D_glucosamine_

025820
type: Reaction
reactant: 355376
fast: false
reversible: false
product: 355388
kinetic law: 355437
product: 355425
product: 355400
product: 355413
reactant: 355352
reactant: 355364
notes: GENE_ASSOCIATION: ( lp_2336 or lp_2324 ) PROTEIN_ASSOCIATION: ( GshF ) or ( GshA ) SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 6.3.2.2
name: R_glutamate_cysteine_ligase

355376
type: SpeciesReference
stoichiometry: 1.0
species: 024239

355388
type: SpeciesReference
stoichiometry: 1.0
species: 023717

028684
type: LocalParameter
value: 0.0

028683
type: LocalParameter
units: 333928
value: 0.0

028682
type: LocalParameter
value: 0.0

028681
type: LocalParameter
units: 333928
value: 999999.0

028680
type: LocalParameter
units: 333928
value: 0.0

355425
type: SpeciesReference
stoichiometry: 1.0
species: 024713

355400
type: SpeciesReference
stoichiometry: 1.0
species: 024245

355413
type: SpeciesReference
stoichiometry: 1.0
species: 024329

355352
type: SpeciesReference
stoichiometry: 1.0
species: 023825

355364
type: SpeciesReference
stoichiometry: 1.0
species: 023918

023918
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Cysteine_

025658
type: Reaction
kinetic law: 348382
product: 348370
reactant: 348358
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Arginine_exchange

027781
type: LocalParameter
value: 1.433333

027780
type: LocalParameter
units: 333928
value: 8.54E-4

027778
type: LocalParameter
value: 0.0

027777
type: LocalParameter
units: 333928
value: 8.54E-4

027776
type: LocalParameter
units: 333928
value: 6.99E-4

348370
type: SpeciesReference
stoichiometry: 1.0
species: 025238

025238
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Arginine_

348358
type: SpeciesReference
stoichiometry: 1.0
species: 023792

023792
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Arginine_

023332
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_trans_Hexadec_2_enoyl_acyl_carrier_protein_

024002
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M__S__Dihydroorotate_

025547
type: Reaction
product: 342096
reactant: 342084
product: 342122
reversible: false
reactant: 342072
name: R_cyclopropane_fatty_acid_synthase__n180_
notes: GENE_ASSOCIATION: ( lp_3174 or lp_1696 ) PROTEIN_ASSOCIATION: ( Cfa2 ) or ( Cfa1 ) SUBSYSTEM: S_ PROTEIN_CLASS: 2.1.1.79
kinetic law: 342134
fast: false
product: 342108

342096
type: SpeciesReference
stoichiometry: 1.0
species: 023729

023729
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_S_Adenosyl_L_homocysteine_

342084
type: SpeciesReference
stoichiometry: 1.0
species: 023768

023768
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_S_Adenosyl_L_methionine_

342122
type: SpeciesReference
stoichiometry: 1.0
species: 024329

342072
type: SpeciesReference
stoichiometry: 1.0
species: 023236

023236
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_cis_Octadec_2_enoyl_acyl_carrier_protein_

027134
type: LocalParameter
value: 0.0

027133
type: LocalParameter
units: 333928
value: 2.1E-5

027132
type: LocalParameter
value: 0.0

027131
type: LocalParameter
units: 333928
value: 999999.0

027130
type: LocalParameter
units: 333928
value: 0.0

342108
type: SpeciesReference
stoichiometry: 1.0
species: 023906

023906
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_cyclopropanoyl_octadecanoyl_acyl_carrier_protein_

025769
type: Reaction
notes: GENE_ASSOCIATION: ( lp_2031 or lp_0850 ) PROTEIN_ASSOCIATION: ( RibC2 ) or ( RibC1 ) SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.7.2
name: R_FMN_adenylyltransferase
product: 352127
fast: false
kinetic law: 352151
reactant: 352091
reactant: 352115
reversible: false
reactant: 352103
product: 352139

352127
type: SpeciesReference
stoichiometry: 1.0
species: 024098

024098
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_FAD_

028415
type: LocalParameter
value: 0.0

028414
type: LocalParameter
units: 333928
value: 0.0

028412
type: LocalParameter
value: 0.0

028411
type: LocalParameter
units: 333928
value: 999999.0

028410
type: LocalParameter
units: 333928
value: 0.0

352091
type: SpeciesReference
stoichiometry: 1.0
species: 023825

352115
type: SpeciesReference
stoichiometry: 1.0
species: 024329

352103
type: SpeciesReference
stoichiometry: 1.0
species: 024110

352139
type: SpeciesReference
stoichiometry: 1.0
species: 024734

025390
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Putrescine_

024737
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Inorganic_triphosphate_

025425
type: Reaction
kinetic law: 334439
product: 334427
reactant: 334415
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_2_methylpropanal_transport

026434
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value: 0.0

026433
type: LocalParameter
units: 333928
value: 0.0

026432
type: LocalParameter
value: 0.0

026430
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units: 333928
value: 999999.0

026429
type: LocalParameter
units: 333928
value: -999999.0

334427
type: SpeciesReference
stoichiometry: 1.0
species: 023302

023302
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_2_methylpropanal_

334415
type: SpeciesReference
stoichiometry: 1.0
species: 023299

023299
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_2_methylpropanal_

025748
type: Reaction
kinetic law: 351284
product: 351271
reactant: 351259
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Succinate_exchange

028293
type: LocalParameter
value: 0.333333

028292
type: LocalParameter
units: 333928
value: 0.010247

028291
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value: 0.0

028289
type: LocalParameter
units: 333928
value: 0.010247

028288
type: LocalParameter
units: 333928
value: 0.008384

351271
type: SpeciesReference
stoichiometry: 1.0
species: 025402

025402
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Succinate_

351259
type: SpeciesReference
stoichiometry: 1.0
species: 024920

024920
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Succinate_

025647
type: Reaction
kinetic law: 347973
product: 347961
reactant: 347949
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_3_methylbutanol_exchange

027710
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value: 0.0

027709
type: LocalParameter
units: 333928
value: 0.001827

027708
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value: 0.0

027706
type: LocalParameter
units: 333928
value: 999999.0

027705
type: LocalParameter
units: 333928
value: 0.0

347961
type: SpeciesReference
stoichiometry: 1.0
species: 025205

025205
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_3_methylbutanol_

347949
type: SpeciesReference
stoichiometry: 1.0
species: 023423

023423
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_3_methylbutanol_

023384
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M__R__3_Hydroxyhexanoyl_acp_

025495
type: Reaction
notes: GENE_ASSOCIATION: ( lp_2873 or lp_1665 or lp_3662 ) PROTEIN_ASSOCIATION: ( Adh2 ) or ( Adh1 ) or ( AdhE ) SUBSYSTEM: S_ PROTEIN_CLASS: 1.1.1.1
product: 338808
fast: false
product: 338820
reactant: 338784
reactant: 338796
kinetic law: 338845
name: R_alcohol_dehydrogenase__ethanol_NAD_
product: 338833
reversible: true

338808
type: SpeciesReference
stoichiometry: 1.0
species: 023630

338820
type: SpeciesReference
stoichiometry: 1.0
species: 024329

338784
type: SpeciesReference
stoichiometry: 1.0
species: 024086

024086
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Ethanol_

338796
type: SpeciesReference
stoichiometry: 1.0
species: 024578

024578
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Nicotinamide_adenine_dinucleotide_

026849
type: LocalParameter
value: 0.0

026848
type: LocalParameter
units: 333928
value: -0.016267

026847
type: LocalParameter
value: 0.0

026846
type: LocalParameter
units: 333928
value: 999999.0

026844
type: LocalParameter
units: 333928
value: -999999.0

338833
type: SpeciesReference
stoichiometry: 1.0
species: 024581

024581
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Nicotinamide_adenine_dinucleotide___reduced_

025894
type: Reaction
notes: GENE_ASSOCIATION: lp_2067 PROTEIN_ASSOCIATION: MvaS SUBSYSTEM: S_ PROTEIN_CLASS: 4.1.3.5
fast: false
reactant: 359568
reversible: true
product: 359592
kinetic law: 359628
product: 359616
name: R_Hydroxymethylglutaryl_CoA_synthase
reactant: 359556
reactant: 359580
product: 359604

359568
type: SpeciesReference
stoichiometry: 1.0
species: 024329

359592
type: SpeciesReference
stoichiometry: 1.0
species: 023621

023621
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Acetoacetyl_CoA_

029025
type: LocalParameter
value: 0.0

029023
type: LocalParameter
units: 333928
value: -1.0E-6

029022
type: LocalParameter
value: 0.0

029021
type: LocalParameter
units: 333928
value: 999999.0

029020
type: LocalParameter
units: 333928
value: -999999.0

359616
type: SpeciesReference
stoichiometry: 1.0
species: 024320

359556
type: SpeciesReference
stoichiometry: 1.0
species: 023903

023903
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Coenzyme_A_

359580
type: SpeciesReference
stoichiometry: 1.0
species: 024371

024371
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Hydroxymethylglutaryl_CoA_

359604
type: SpeciesReference
stoichiometry: 1.0
species: 023639

023639
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Acetyl_CoA_

024401
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_imidazole_lactate_

026156
type: Reaction
kinetic law: 370398
product: 370386
reactant: 370374
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_Phenol_transport

030061
type: LocalParameter
value: 0.0

030060
type: LocalParameter
units: 333928
value: 0.0

030059
type: LocalParameter
value: 0.0

030057
type: LocalParameter
units: 333928
value: 999999.0

030056
type: LocalParameter
units: 333928
value: -999999.0

370386
type: SpeciesReference
stoichiometry: 1.0
species: 024695

370374
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stoichiometry: 1.0
species: 024692

024692
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Phenol_

026269
type: Reaction
reversible: false
reactant: 376972
kinetic law: 377012
product: 376985
name: R_sorbitol_6_phosphatase
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
reactant: 376959
fast: false
product: 376999

376972
type: SpeciesReference
stoichiometry: 1.0
species: 024863

024863
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Sorbitol_6_phosphate_

030653
type: LocalParameter
value: 0.0

030651
type: LocalParameter
units: 333928
value: 0.0

030650
type: LocalParameter
value: 0.0

030648
type: LocalParameter
units: 333928
value: 999999.0

030647
type: LocalParameter
units: 333928
value: 0.0

376985
type: SpeciesReference
stoichiometry: 1.0
species: 024713

376959
type: SpeciesReference
stoichiometry: 1.0
species: 024320

376999
type: SpeciesReference
stoichiometry: 1.0
species: 024866

024866
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Sorbitol_

024986
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_alpha_alpha__Trehalose_6_phosphate_

023798
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Arginyl_tRNA_Arg__

026309
type: Reaction
notes: GENE_ASSOCIATION: lp_2264 PROTEIN_ASSOCIATION: DapD SUBSYSTEM: S_ PROTEIN_CLASS: 2.3.1.117
reactant: 379043
kinetic law: 379103
fast: false
reversible: false
product: 379079
reactant: 379067
name: R_tetrahydropicolinate_succinylase
product: 379091
reactant: 379055

379043
type: SpeciesReference
stoichiometry: 1.0
species: 024320

030861
type: LocalParameter
value: 0.0

030860
type: LocalParameter
units: 333928
value: 0.0

030858
type: LocalParameter
value: 0.0

030857
type: LocalParameter
units: 333928
value: 999999.0

030856
type: LocalParameter
units: 333928
value: 0.0

379079
type: SpeciesReference
stoichiometry: 1.0
species: 023903

379067
type: SpeciesReference
stoichiometry: 1.0
species: 024941

024941
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_2_3_4_5_Tetrahydrodipicolinate_

379091
type: SpeciesReference
stoichiometry: 1.0
species: 024896

024896
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N_Succinyl_2_L_amino_6_oxoheptanedioate_

379055
type: SpeciesReference
stoichiometry: 1.0
species: 024923

024923
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Succinyl_CoA_

024587
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Nicotinamide_adenine_dinucleotide_phosphate___reduced_

025520
type: Reaction
product: 340497
fast: false
reactant: 340473
reactant: 340461
notes: GENE_ASSOCIATION: lp_0579 PROTEIN_ASSOCIATION: PanD SUBSYSTEM: S_ PROTEIN_CLASS: 4.1.1.11
product: 340485
name: R_aspartate_1_decarboxylase
kinetic law: 340509
reversible: false

340497
type: SpeciesReference
stoichiometry: 1.0
species: 023897

023897
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_CO2_

340473
type: SpeciesReference
stoichiometry: 1.0
species: 024329

340461
type: SpeciesReference
stoichiometry: 1.0
species: 023813

023813
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Aspartate_

340485
type: SpeciesReference
stoichiometry: 1.0
species: 023747

023747
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_beta_Alanine_

026986
type: LocalParameter
value: 0.0

026985
type: LocalParameter
units: 333928
value: 0.0

026984
type: LocalParameter
value: 0.0

026983
type: LocalParameter
units: 333928
value: 999999.0

026981
type: LocalParameter
units: 333928
value: 0.0

026147
type: Reaction
product: 370036
product: 370049
reactant: 370011
reversible: false
kinetic law: 370061
reactant: 370024
notes: GENE_ASSOCIATION: lp_2219 PROTEIN_ASSOCIATION: Pgl SUBSYSTEM: S_ PROTEIN_CLASS: 3.1.1.31
name: R_6_phosphogluconolactonase
fast: false

370036
type: SpeciesReference
stoichiometry: 1.0
species: 023552

023552
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_6_Phospho_D_gluconate_

370049
type: SpeciesReference
stoichiometry: 1.0
species: 024329

370011
type: SpeciesReference
stoichiometry: 1.0
species: 023558

023558
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_6_phospho_D_glucono_1_5_lactone_

030016
type: LocalParameter
value: 0.0

030015
type: LocalParameter
units: 333928
value: 0.004549

030013
type: LocalParameter
value: 0.0

030012
type: LocalParameter
units: 333928
value: 999999.0

030011
type: LocalParameter
units: 333928
value: 0.0

370024
type: SpeciesReference
stoichiometry: 1.0
species: 024320

026314
type: Reaction
kinetic law: 379404
product: 379392
product: 379380
reactant: 379368
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS: 4.1.2.5
fast: false
reversible: true
name: R_threonine_aldolase

030887
type: LocalParameter
value: 0.0

030886
type: LocalParameter
units: 333928
value: 0.004203

030884
type: LocalParameter
value: 0.0

030883
type: LocalParameter
units: 333928
value: 999999.0

030882
type: LocalParameter
units: 333928
value: -999999.0

379392
type: SpeciesReference
stoichiometry: 1.0
species: 024251

379380
type: SpeciesReference
stoichiometry: 1.0
species: 023630

379368
type: SpeciesReference
stoichiometry: 1.0
species: 024965

024965
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Threonine_

023540
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_5_Methyltetrahydropteroyltri_L_glutamate_

026088
type: Reaction
product: 366954
reversible: true
kinetic law: 366979
product: 366966
notes: GENE_ASSOCIATION: lp_0242 PROTEIN_ASSOCIATION: Ynk1 SUBSYSTEM: S_Nucleotide_Salvage_Pathways PROTEIN_CLASS: 2.7.4.6
name: R_nucleoside_diphosphate_kinase__ATPdCDP_
fast: false
reactant: 366930
reactant: 366942

366954
type: SpeciesReference
stoichiometry: 1.0
species: 023717

029697
type: LocalParameter
value: 0.0

029696
type: LocalParameter
units: 333928
value: 0.0

029695
type: LocalParameter
value: 0.0

029694
type: LocalParameter
units: 333928
value: 999999.0

029693
type: LocalParameter
units: 333928
value: -999999.0

366966
type: SpeciesReference
stoichiometry: 1.0
species: 023960

023960
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_dCTP_

366930
type: SpeciesReference
stoichiometry: 1.0
species: 023825

366942
type: SpeciesReference
stoichiometry: 1.0
species: 023954

023954
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_dCDP_

026311
type: Reaction
fast: false
notes: GENE_ASSOCIATION: lp_3204 PROTEIN_ASSOCIATION: NupC SUBSYSTEM: S_Transport PROTEIN_CLASS:
kinetic law: 379259
reactant: 379223
reactant: 379211
name: R_thymidine_transport_in_via_proton_symport
product: 379235
product: 379247
reversible: false

030874
type: LocalParameter
value: 0.0

030873
type: LocalParameter
units: 333928
value: 7.0E-6

030871
type: LocalParameter
value: 0.0

030870
type: LocalParameter
units: 333928
value: 999999.0

030869
type: LocalParameter
units: 333928
value: 0.0

379223
type: SpeciesReference
stoichiometry: 1.0
species: 024977

024977
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Thymidine_

379211
type: SpeciesReference
stoichiometry: 1.0
species: 024332

379235
type: SpeciesReference
stoichiometry: 1.0
species: 024329

379247
type: SpeciesReference
stoichiometry: 1.0
species: 024974

024974
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Thymidine_

024173
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_beta_D_glucose_6_phosphate_

024107
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N_Formyl_L_methionine_

023414
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3_methylbutanal_

023651
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N_acetylgalactosamine_6_phosphate_

025512
type: Reaction
reactant: 339882
product: 339918
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reactant: 339894
reversible: true
product: 339906
name: R_L_arginine_transport_in_via_proton_symport
kinetic law: 339930

339882
type: SpeciesReference
stoichiometry: 1.0
species: 023792

339918
type: SpeciesReference
stoichiometry: 1.0
species: 024329

339894
type: SpeciesReference
stoichiometry: 1.0
species: 024332

339906
type: SpeciesReference
stoichiometry: 1.0
species: 023789

023789
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Arginine_

026943
type: LocalParameter
value: 0.0

026942
type: LocalParameter
units: 333928
value: -8.54E-4

026941
type: LocalParameter
value: 0.0

026939
type: LocalParameter
units: 333928
value: 999999.0

026938
type: LocalParameter
units: 333928
value: -999999.0

025879
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reversible: false
reactant: 358717
reactant: 358741
notes: GENE_ASSOCIATION: lp_1674 PROTEIN_ASSOCIATION: FabG1 SUBSYSTEM: S_ PROTEIN_CLASS: 1.1.1.100
product: 358767
name: R__3R__3_Hydroxypalmitoyl_acyl_carrier_proteinNADP_oxidoreductase
kinetic law: 358780
product: 358754
reactant: 358729
fast: false

358717
type: SpeciesReference
stoichiometry: 1.0
species: 023444

023444
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3_Oxohexadecanoyl_acp_

358741
type: SpeciesReference
stoichiometry: 1.0
species: 024587

358767
type: SpeciesReference
stoichiometry: 1.0
species: 024584

024584
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Nicotinamide_adenine_dinucleotide_phosphate_

028954
type: LocalParameter
value: 0.0

028952
type: LocalParameter
units: 333928
value: 8.1E-5

028951
type: LocalParameter
value: 0.0

028949
type: LocalParameter
units: 333928
value: 999999.0

028948
type: LocalParameter
units: 333928
value: 0.0

358754
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stoichiometry: 1.0
species: 023396

023396
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M__3R__3_Hydroxypalmitoyl_acyl_carrier_protein_

358729
type: SpeciesReference
stoichiometry: 1.0
species: 024329

024515
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Methionine_

024053
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_dTDPglucose_

025513
type: Reaction
reactant: 339943
name: R_aspartate_semialdehyde_dehydrogenase
fast: false
kinetic law: 340015
reversible: true
product: 339979
reactant: 339955
notes: GENE_ASSOCIATION: ( lp_2570 or lp_1346 ) PROTEIN_ASSOCIATION: ( Asd2 ) or ( Asd1 ) SUBSYSTEM: S_ PROTEIN_CLASS: 1.2.1.11
product: 339991
product: 340003
reactant: 339967

339943
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stoichiometry: 1.0
species: 023819

023819
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Aspartate_4_semialdehyde_

026950
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value: 0.0

026949
type: LocalParameter
units: 333928
value: -9.17E-4

026948
type: LocalParameter
value: 0.0

026947
type: LocalParameter
units: 333928
value: 999999.0

026945
type: LocalParameter
units: 333928
value: -999999.0

339979
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stoichiometry: 1.0
species: 023513

339955
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species: 024584

339991
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340003
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species: 024587

339967
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species: 024713

025735
type: Reaction
kinetic law: 350883
product: 350871
reactant: 350859
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Proline_exchange

028219
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028218
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units: 333928
value: -3.0E-5

028217
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value: 0.0

028215
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units: 333928
value: 6.88E-4

028214
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units: 333928
value: -5.63E-4

350871
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species: 025389

025389
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Proline_

350859
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stoichiometry: 1.0
species: 024761

024761
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_L_Proline_

025235
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name: M_L_Arabinose_

023528
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initial concentration: NaN
initial amount: NaN
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name: M__R__5_Diphosphomevalonate_

024209
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Glucose_

025859
type: Reaction
fast: false
reactant: 357734
kinetic law: 357770
product: 357758
name: R_guanine_phosphoribosyltransferase
reactant: 357721
notes: GENE_ASSOCIATION: lp_0546 PROTEIN_ASSOCIATION: HprT SUBSYSTEM: S_ PROTEIN_CLASS:
reversible: false
product: 357746

357734
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species: 024767

024767
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_5_Phospho_alpha_D_ribose_1_diphosphate_

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028863
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units: 333928
value: 0.0

028862
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028861
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028860
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357758
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357721
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species: 024311

024311
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initial concentration: NaN
initial amount: NaN
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name: M_Guanine_

357746
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species: 024293

024293
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initial amount: NaN
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name: M_GMP_

024893
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has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N_Succinyl_LL_2_6_diaminoheptanedioate_

025613
type: Reaction
kinetic law: 346304
reactant: 346256
fast: false
name: R_dimethylallyltranstransferase
reactant: 346268
notes: GENE_ASSOCIATION: lp_1602 PROTEIN_ASSOCIATION: IspA SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.1
product: 346292
product: 346280
reversible: false

027522
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027521
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units: 333928
value: 0.0

027520
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value: 0.0

027518
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units: 333928
value: 999999.0

027517
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units: 333928
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346256
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species: 024026

024026
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Dimethylallyl_diphosphate_

346268
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species: 024431

024431
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Isopentenyl_diphosphate_

346292
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species: 024734

346280
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species: 024296

024296
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Geranyl_diphosphate_

025715
type: Reaction
kinetic law: 350267
product: 350255
reactant: 350243
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Methional_exchange

028112
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value: 0.0

028111
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units: 333928
value: 6.38E-4

028110
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value: 0.0

028109
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units: 333928
value: 999999.0

028107
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units: 333928
value: 0.0

350255
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stoichiometry: 1.0
species: 025365

025365
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Methional_

350243
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stoichiometry: 1.0
species: 024524

024524
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Methional_

025471
type: Reaction
reactant: 337085
product: 337109
product: 337122
kinetic law: 337134
notes: GENE_ASSOCIATION: lp_2086 PROTEIN_ASSOCIATION: Apt SUBSYSTEM: S_ PROTEIN_CLASS: 2.4.2.7
reversible: false
reactant: 337097
fast: false
name: R_adenine_phosphoribosyltransferase

337085
type: SpeciesReference
stoichiometry: 1.0
species: 023708

023708
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Adenine_

337109
type: SpeciesReference
stoichiometry: 1.0
species: 023771

337122
type: SpeciesReference
stoichiometry: 1.0
species: 024734

026704
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026703
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units: 333928
value: 0.0

026702
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value: 0.0

026701
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units: 333928
value: 999999.0

026699
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units: 333928
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337097
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stoichiometry: 1.0
species: 024767

025220
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_N_Acetyl_D_galactosamine_

025502
type: Reaction
reactant: 339284
reactant: 339271
product: 339321
notes: GENE_ASSOCIATION: lp_3567 PROTEIN_ASSOCIATION: Lp_3567 SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.1.60
name: R_N_acetyl_D_mannosamine_kinase
reversible: false
product: 339308
fast: false
kinetic law: 339333
product: 339296

339284
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species: 023825

339271
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species: 023681

023681
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N_Acetyl_D_mannosamine_

339321
type: SpeciesReference
stoichiometry: 1.0
species: 024329

339308
type: SpeciesReference
stoichiometry: 1.0
species: 023717

026890
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026889
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units: 333928
value: 0.0

026888
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value: 0.0

026887
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units: 333928
value: 999999.0

026886
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units: 333928
value: 0.0

339296
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stoichiometry: 1.0
species: 023684

023684
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N_Acetyl_D_mannosamine_6_phosphate_

024569
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Sodium_

025472
type: Reaction
fast: false
product: 337182
reactant: 337158
reactant: 337170
product: 337194
kinetic law: 337206
name: R_acetyldiaminopimelate_transaminase
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
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reversible: true

337182
type: SpeciesReference
stoichiometry: 1.0
species: 023636

023636
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N_Acetyl_L_2_amino_6_oxopimelate_

337158
type: SpeciesReference
stoichiometry: 1.0
species: 023744

023744
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N6_Acetyl_LL_2_6_diaminoheptanedioate_

337170
type: SpeciesReference
stoichiometry: 1.0
species: 024329

337194
type: SpeciesReference
stoichiometry: 1.0
species: 024239

026709
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026708
type: LocalParameter
units: 333928
value: -6.4E-5

026707
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value: 0.0

026706
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units: 333928
value: 999999.0

026705
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units: 333928
value: -999999.0

337146
type: SpeciesReference
stoichiometry: 1.0
species: 023741

025586
type: Reaction
name: R_diaminopimelate_decarboxylase
product: 344721
product: 344733
reactant: 344709
reversible: false
fast: false
reactant: 344697
kinetic law: 344745
notes: GENE_ASSOCIATION: lp_1713 PROTEIN_ASSOCIATION: LysA SUBSYSTEM: S_ PROTEIN_CLASS: 4.1.1.20

344721
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species: 023897

344733
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species: 024467

024467
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Lysine_

344709
type: SpeciesReference
stoichiometry: 1.0
species: 024329

344697
type: SpeciesReference
stoichiometry: 1.0
species: 023209

023209
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_meso_2_6_Diaminoheptanedioate_

027352
type: LocalParameter
value: 0.0

027351
type: LocalParameter
units: 333928
value: 0.0

027350
type: LocalParameter
value: 0.0

027349
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units: 333928
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027348
type: LocalParameter
units: 333928
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025694
type: Reaction
kinetic law: 349614
product: 349602
reactant: 349590
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Histidine_exchange

027997
type: LocalParameter
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027996
type: LocalParameter
units: 333928
value: -1.89E-4

027995
type: LocalParameter
value: 0.0

027993
type: LocalParameter
units: 333928
value: -1.55E-4

027992
type: LocalParameter
units: 333928
value: -1.89E-4

349602
type: SpeciesReference
stoichiometry: 1.0
species: 025338

025338
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Histidine_

349590
type: SpeciesReference
stoichiometry: 1.0
species: 024350

024350
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Histidine_

026050
type: Reaction
kinetic law: 364798
product: 364786
reactant: 364774
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_Methional_transport

029470
type: LocalParameter
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029468
type: LocalParameter
units: 333928
value: 6.38E-4

029467
type: LocalParameter
value: 0.0

029465
type: LocalParameter
units: 333928
value: 999999.0

029464
type: LocalParameter
units: 333928
value: -999999.0

364786
type: SpeciesReference
stoichiometry: 1.0
species: 024524

364774
type: SpeciesReference
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species: 024521

024521
type: Species
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Methional_

025583
type: Reaction
reactant: 344478
fast: false
product: 344490
name: R_Diacylglycerol_kinase__LPL_specific_
kinetic law: 344526
notes: GENE_ASSOCIATION: lp_1968 PROTEIN_ASSOCIATION: Dgk SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.1.107
reversible: false
reactant: 344466
product: 344514
product: 344502

344478
type: SpeciesReference
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species: 023939

023939
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_1_2_Diacylglycerol__LPL_specific_

344490
type: SpeciesReference
stoichiometry: 1.0
species: 023717

027334
type: LocalParameter
value: 0.0

027333
type: LocalParameter
units: 333928
value: 1.36E-4

027332
type: LocalParameter
value: 0.0

027331
type: LocalParameter
units: 333928
value: 999999.0

027330
type: LocalParameter
units: 333928
value: 0.0

344466
type: SpeciesReference
stoichiometry: 1.0
species: 023825

344514
type: SpeciesReference
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species: 024650

024650
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_phosphatidic_acid__Lb_plantarum_specific__

344502
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species: 024329

025707
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kinetic law: 350013
product: 350001
reactant: 349989
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Leucine_exchange

028066
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028065
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units: 333928
value: -0.001885

028064
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028063
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value: -0.001885

028061
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350001
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species: 025354

025354
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boundary condition: true
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initial concentration: NaN
initial amount: NaN
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name: M_L_Leucine_

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type: SpeciesReference
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species: 024461

024461
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Leucine_

026191
type: Reaction
name: R_phosphoenolpyruvate_synthase
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reactant: 372153
product: 372226
reversible: false
product: 372202
notes: GENE_ASSOCIATION: lp_1912 PROTEIN_ASSOCIATION: Pps SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 2.7.9.2
kinetic law: 372238
product: 372189
reactant: 372165
product: 372214
reactant: 372177

372153
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species: 023825

372226
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species: 024713

372202
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species: 024329

030244
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030242
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030241
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030239
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030238
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units: 333928
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372189
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species: 023771

372165
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species: 024320

372214
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372177
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species: 024803

024821
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Ribitol_5_phosphate_

023408
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3_methylbutanoic_acid_

025708
type: Reaction
kinetic law: 350050
product: 350037
reactant: 350025
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Lysine_exchange

028072
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028071
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units: 333928
value: -5.6E-5

028070
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028068
type: LocalParameter
units: 333928
value: 0.0

028067
type: LocalParameter
units: 333928
value: -7.57E-4

350037
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species: 025355

025355
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boundary condition: true
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initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Lysine_

350025
type: SpeciesReference
stoichiometry: 1.0
species: 024470

024470
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Lysine_

025578
type: Reaction
product: 344237
product: 344225
reactant: 344201
name: R_cytidylate_kinase__CMP_
reversible: true
fast: false
notes: GENE_ASSOCIATION: lp_1883 PROTEIN_ASSOCIATION: Cmk SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.4.14
reactant: 344213
kinetic law: 344249

344237
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species: 023858

023858
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_CDP_

344225
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species: 023717

344201
type: SpeciesReference
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species: 023825

344213
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stoichiometry: 1.0
species: 023894

023894
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_CMP_

027310
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027309
type: LocalParameter
units: 333928
value: 3.33E-4

027308
type: LocalParameter
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027307
type: LocalParameter
units: 333928
value: 999999.0

027306
type: LocalParameter
units: 333928
value: -999999.0

025852
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product: 357311
reactant: 357299
notes: GENE_ASSOCIATION: lp_1602 PROTEIN_ASSOCIATION: IspA SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.10
reactant: 357287
fast: false
name: R_geranyltranstransferase
reversible: false
product: 357323
kinetic law: 357335

357311
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species: 024131

024131
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Farnesyl_diphosphate_

357299
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species: 024431

357287
type: SpeciesReference
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357323
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species: 024734

028831
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028830
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028829
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028828
type: LocalParameter
units: 333928
value: 999999.0

028827
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units: 333928
value: 0.0

025579
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name: R_cytidylate_kinase__dCMP_
product: 344298
notes: GENE_ASSOCIATION: lp_1883 PROTEIN_ASSOCIATION: Cmk SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.4.14
reversible: true
kinetic law: 344310
fast: false
product: 344285
reactant: 344261
reactant: 344273

344298
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species: 023954

027316
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027315
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value: 0.0

027314
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027313
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027312
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344285
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344261
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344273
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species: 023957

023957
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name: M_dCMP_

025461
type: Reaction
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reactant: 336444
product: 336468
kinetic law: 336494
product: 336481
reversible: true
reactant: 336456
name: R_acetate_transport_inout_via_proton_symport
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:

336444
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species: 023627

023627
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name: M_Acetate_

336468
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species: 023624

023624
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name: M_Acetate_

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value: -0.078773

026641
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336481
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336456
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product: 382593
kinetic law: 382617
product: 382605
reactant: 382557
product: 382581
reversible: false
fast: false
name: R_uridine_kinase__GTPUridine_
reactant: 382569
notes: GENE_ASSOCIATION: lp_1562 PROTEIN_ASSOCIATION: Udk SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.1.48

382593
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species: 024329

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value: 0.0

031190
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031189
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031187
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382581
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_GDP_

382569
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024035
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Deoxyribose_

026224
type: Reaction
reactant: 374569
name: R_purine_nucleoside_phosphorylase__Xanthosine_
reactant: 374581
product: 374593
reversible: true
notes: GENE_ASSOCIATION: lp_0125 PROTEIN_ASSOCIATION: DeoD SUBSYSTEM: S_Nucleotide_Salvage_Pathways PROTEIN_CLASS: 2.4.2.1
product: 374605
kinetic law: 374617
fast: false

374569
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species: 024713

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species: 025166

025166
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Xanthosine_

374593
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_alpha_D_Ribose_1_phosphate_

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025157
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initial concentration: NaN
initial amount: NaN
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name: M_Xanthine_

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030418
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030417
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030415
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units: 333928
value: 999999.0

030414
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026229
type: Reaction
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
kinetic law: 374893
reactant: 374833
product: 374881
name: R_Pyridoxal_5_phosphate_phosphatase
fast: false
reversible: false
reactant: 374857
product: 374869
reactant: 374845

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030444
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value: 0.0

030442
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030441
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030440
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374833
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024794
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Pyridoxal_

374857
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species: 024791

024791
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Pyridoxal_5__phosphate_

374869
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species: 024713

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species: 024320

024935
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_L_tartarate_

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Oxalate_

026106
type: Reaction
kinetic law: 367992
reactant: 367943
product: 367980
product: 367967
reactant: 367919
name: R_nitrate_reductase__NADPH_
fast: false
reversible: false
reactant: 367931
product: 367955
notes: GENE_ASSOCIATION: ( lp_1497 and lp_1498 and lp_1499 and lp_1500 ) PROTEIN_ASSOCIATION: NarGHIJ SUBSYSTEM: S_ PROTEIN_CLASS: 1.7.1.3

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029794
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units: 333928
value: 0.0

029792
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029791
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units: 333928
value: 999999.0

029790
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units: 333928
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species: 024614

024614
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Nitrate_

367980
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species: 024608

024608
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Nitrite_

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species: 024584

367919
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species: 024329

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scale: 0
multipler: 2.7777E-4
kind: SECOND

333904
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scale: 0
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333892
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multipler: 1.0
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024560
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Menaquinone_7_

025846
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kinetic law: 356985
notes: GENE_ASSOCIATION: ( lp_2344 or lp_1328 or lp_2582 or lp_1578 ) PROTEIN_ASSOCIATION: P_3.1.4.46 SUBSYSTEM: S_ PROTEIN_CLASS: 3.1.4.46
reactant: 356937
reversible: false
product: 356973
fast: false
product: 356961
product: 356949
reactant: 356925
name: R_Glycerophosphodiester_phosphodiesterase__Glycerophosphoethanolamine_

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value: 0.0

028804
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units: 333928
value: 0.0

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value: 0.0

028802
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units: 333928
value: 999999.0

028801
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units: 333928
value: 0.0

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species: 024320

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species: 024329

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species: 024266

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species: 024083

024083
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Ethanolamine_

356925
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species: 024161

024161
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_sn_Glycero_3_phosphoethanolamine_

025679
type: Reaction
kinetic law: 349070
product: 349058
reactant: 349046
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_D_Fructose_exchange

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027901
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units: 333928
value: 0.0

027900
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value: 0.0

027898
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units: 333928
value: 0.0

027897
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units: 333928
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349058
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species: 025295

025295
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_D_Fructose_

349046
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species: 024137

024137
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_D_Fructose_

023356
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3__4_Hydroxyphenyl_pyruvate_

026107
type: Reaction
kinetic law: 368028
product: 368016
reactant: 368004
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_O2_transport_in_via_diffusion

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029800
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units: 333928
value: 0.0

029799
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029797
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value: 999999.0

029796
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units: 333928
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368016
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stoichiometry: 1.0
species: 024620

024620
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_O2_

368004
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stoichiometry: 1.0
species: 024623

024623
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_O2_

026350
type: Reaction
reversible: false
product: 381419
notes: GENE_ASSOCIATION: lp_0467 PROTEIN_ASSOCIATION: GlmU SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.7.23
fast: false
product: 381431
kinetic law: 381443
reactant: 381394
reactant: 381382
name: R_UDP_N_acetylglucosamine_diphosphorylase
reactant: 381407

381419
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species: 024734

381431
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stoichiometry: 1.0
species: 025076

031079
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031077
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units: 333928
value: 1.39E-4

031076
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value: 0.0

031074
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units: 333928
value: 999999.0

031073
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units: 333928
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stoichiometry: 1.0
species: 024329

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species: 023657

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N_Acetyl_D_glucosamine_1_phosphate_

381407
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stoichiometry: 1.0
species: 025145

025145
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_UTP_

025825
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kinetic law: 355716
product: 355704
reactant: 355692
notes: GENE_ASSOCIATION: lp_2268 PROTEIN_ASSOCIATION: MurI SUBSYSTEM: S_ PROTEIN_CLASS: 5.1.1.3
fast: false
reversible: true
name: R_glutamate_racemase

028705
type: LocalParameter
value: 0.0

028704
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units: 333928
value: -6.4E-5

028703
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value: 0.0

028702
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units: 333928
value: 999999.0

028701
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units: 333928
value: -999999.0

355704
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stoichiometry: 1.0
species: 024239

355692
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stoichiometry: 1.0
species: 024236

024236
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Glutamate_

025449
type: Reaction
fast: false
reactant: 335864
product: 335876
reversible: false
name: R_2_aceto_2_hydroxybutanoate_synthase
notes: GENE_ASSOCIATION: lp_1005 PROTEIN_ASSOCIATION: AlsS SUBSYSTEM: S_ PROTEIN_CLASS:
reactant: 335852
product: 335888
reactant: 335840
kinetic law: 335900

335864
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stoichiometry: 1.0
species: 024803

335876
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stoichiometry: 1.0
species: 023218

023218
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M__S__2_Aceto_2_hydroxybutanoate_

335852
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stoichiometry: 1.0
species: 024329

335888
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species: 023897

335840
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species: 023311

023311
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_2_Oxobutanoate_

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026579
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units: 333928
value: 0.0

026578
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value: 0.0

026577
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units: 333928
value: 999999.0

026575
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units: 333928
value: 0.0

026038
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fast: false
reactant: 364096
name: R_Dodecanoyl_acyl_carrier_proteinmalonyl_acyl_carrier_protein__C_acyltransferase
reactant: 364084
product: 364144
reactant: 364108
kinetic law: 364156
reversible: false
product: 364120
product: 364132
notes: GENE_ASSOCIATION: lp_1675 PROTEIN_ASSOCIATION: P_2.3.1.41 SUBSYSTEM: S_ PROTEIN_CLASS: 2.3.1.41

364096
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species: 024329

364084
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stoichiometry: 1.0
species: 023966

023966
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Dodecanoyl_acyl_carrier_protein_

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species: 023897

364108
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species: 024485

024485
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Malonyl_acyl_carrier_protein_

029415
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029414
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units: 333928
value: 8.3E-5

029413
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value: 0.0

029412
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units: 333928
value: 999999.0

029411
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units: 333928
value: 0.0

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stoichiometry: 1.0
species: 023453

023453
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3_Oxotetradecanoyl_acyl_carrier_protein_

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species: 023693

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Acyl_carrier_Protein_

026299
type: Reaction
notes: GENE_ASSOCIATION: ( ( ( lp_0185 or lp_3219 ) and lp_1273 and lp_1274 ) or ( ( lp_3520 and lp_3522 ) and lp_1273 and lp_1274 ) ) PROTEIN_ASSOCIATION: ( EII_suc and Hpr and PtsI ) or ( EII_glc and Hpr and PtsI ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
kinetic law: 378646
product: 378622
reversible: false
reactant: 378598
product: 378634
name: R_sucrose_transport_via_PEPPyr_PTS
fast: false
reactant: 378610

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value: 0.0

030808
type: LocalParameter
units: 333928
value: 0.0

030806
type: LocalParameter
value: 0.0

030805
type: LocalParameter
units: 333928
value: 999999.0

030804
type: LocalParameter
units: 333928
value: 0.0

378622
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stoichiometry: 1.0
species: 024803

378598
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stoichiometry: 1.0
species: 024677

378634
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species: 024914

024914
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Sucrose_6_phosphate_

378610
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species: 024929

024929
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Sucrose_

025936
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notes: GENE_ASSOCIATION: ( lp_3483 and lp_3484 ) PROTEIN_ASSOCIATION: LacLM SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 3.2.1.108
product: 361931
product: 361943
reversible: false
reactant: 361919
kinetic law: 361955
reactant: 361907
fast: false
name: R_lactase

361931
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species: 024182

024182
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Galactose_

361943
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stoichiometry: 1.0
species: 024209

361919
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stoichiometry: 1.0
species: 024452

024452
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Lactose_

029224
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029223
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value: 0.0

029222
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029221
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029219
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361907
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stoichiometry: 1.0
species: 024320

023510
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_4_Methyl_5__2_phosphoethyl__thiazole_

025774
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reactant: 352441
kinetic law: 352477
product: 352465
reactant: 352428
reversible: false
product: 352453
notes: GENE_ASSOCIATION: ( lp_2097 and lp_1273 and lp_1274 ) PROTEIN_ASSOCIATION: ( EII_fru and Hpr and PtsI ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
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name: R_D_fructose_transport_via_PEPPyr_PTS

352441
type: SpeciesReference
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species: 024137

028447
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value: 0.0

028446
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units: 333928
value: 0.0

028445
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028443
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units: 333928
value: 999999.0

028442
type: LocalParameter
units: 333928
value: 0.0

352465
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stoichiometry: 1.0
species: 024803

352428
type: SpeciesReference
stoichiometry: 1.0
species: 024677

352453
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species: 024092

024092
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Fructose_1_phosphate_

024488
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Malonyl_CoA_

025392
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Pyridoxine_

026343
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fast: false
name: R_tyrosine_transaminase
reactant: 380875
reversible: true
kinetic law: 380923
reactant: 380887
notes: GENE_ASSOCIATION: lp_2551 PROTEIN_ASSOCIATION: HisC SUBSYSTEM: S_ PROTEIN_CLASS: 2.6.1.5
product: 380899
product: 380911

380875
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stoichiometry: 1.0
species: 023741

031033
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031032
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units: 333928
value: 0.001075

031030
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031029
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units: 333928
value: 999999.0

031027
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units: 333928
value: -999999.0

380887
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stoichiometry: 1.0
species: 025058

380899
type: SpeciesReference
stoichiometry: 1.0
species: 023356

380911
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stoichiometry: 1.0
species: 024239

024602
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Ammonium_

025814
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product: 354975
notes: GENE_ASSOCIATION: lp_1581 PROTEIN_ASSOCIATION: GlnA SUBSYSTEM: S_ PROTEIN_CLASS: 6.3.1.2
product: 354939
name: R_glutamine_synthetase
product: 354963
fast: false
reactant: 354915
reactant: 354927
reactant: 354903
product: 354951
reversible: false
kinetic law: 354988

354975
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species: 024713

354939
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species: 023717

354963
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species: 024329

354915
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species: 024239

354927
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species: 024599

354903
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species: 023825

354951
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species: 024221

024221
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Glutamine_

028655
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value: 0.0

028654
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units: 333928
value: 0.001629

028653
type: LocalParameter
value: 0.0

028652
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units: 333928
value: 999999.0

028651
type: LocalParameter
units: 333928
value: 0.0

024917
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Succinate_

025539
type: Reaction
fast: false
notes: GENE_ASSOCIATION: lp_1681 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_ PROTEIN_CLASS: 1.3.1.10
reactant: 341624
product: 341636
reversible: false
reactant: 341612
kinetic law: 341659
name: R_Butyryl_acyl_carrier_proteinmalonyl_CoA_C_acyltransferase
product: 341647
reactant: 341599

341624
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stoichiometry: 1.0
species: 024581

341636
type: SpeciesReference
stoichiometry: 1.0
species: 023840

023840
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Butyryl_acyl_carrier_protein_

341612
type: SpeciesReference
stoichiometry: 1.0
species: 024329

027094
type: LocalParameter
value: 0.0

027093
type: LocalParameter
units: 333928
value: 8.3E-5

027092
type: LocalParameter
value: 0.0

027091
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units: 333928
value: 999999.0

027090
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units: 333928
value: 0.0

341647
type: SpeciesReference
stoichiometry: 1.0
species: 024578

341599
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species: 023227

023227
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_But_2_enoyl_acyl_carrier_protein_

025652
type: Reaction
kinetic law: 348153
product: 348141
reactant: 348129
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_N_Acetyl_D_galactosamine_exchange

027741
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value: 0.0

027740
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units: 333928
value: 0.0

027739
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value: 0.0

027738
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units: 333928
value: 999999.0

027736
type: LocalParameter
units: 333928
value: 0.0

348141
type: SpeciesReference
stoichiometry: 1.0
species: 025220

348129
type: SpeciesReference
stoichiometry: 1.0
species: 023654

023654
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_N_Acetyl_D_galactosamine_

025431
type: Reaction
kinetic law: 334790
product: 334778
reactant: 334766
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_3_methylbutanal_transport

026466
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value: 0.0

026465
type: LocalParameter
units: 333928
value: 0.0

026464
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value: 0.0

026463
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units: 333928
value: 999999.0

026462
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units: 333928
value: -999999.0

334778
type: SpeciesReference
stoichiometry: 1.0
species: 023417

023417
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_3_methylbutanal_

334766
type: SpeciesReference
stoichiometry: 1.0
species: 023414

026339
type: Reaction
notes: GENE_ASSOCIATION: ( ( lp_0264 and lp_0265 ) and lp_1273 and lp_1274 ) PROTEIN_ASSOCIATION: ( EIIBC_tre and Hpr and PtsI ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
kinetic law: 380635
product: 380611
reactant: 380587
name: R_trehalose_transport_via_PEPPyr_PTS
reactant: 380599
product: 380623
reversible: false
fast: false

031007
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value: 0.0

031006
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units: 333928
value: 0.0

031004
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value: 0.0

031003
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units: 333928
value: 999999.0

031002
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units: 333928
value: 0.0

380611
type: SpeciesReference
stoichiometry: 1.0
species: 024803

380587
type: SpeciesReference
stoichiometry: 1.0
species: 024677

380599
type: SpeciesReference
stoichiometry: 1.0
species: 024989

024989
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Trehalose_

380623
type: SpeciesReference
stoichiometry: 1.0
species: 024986

023564
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_capsular_polysaccharide_linkage_unit__LPL_specific_

026334
type: Reaction
kinetic law: 380368
product: 380356
reactant: 380344
notes: GENE_ASSOCIATION: lp_0791 PROTEIN_ASSOCIATION: TpiA SUBSYSTEM: S_ PROTEIN_CLASS: 5.3.1.1
fast: false
reversible: true
name: R_triose_phosphate_isomerase

030981
type: LocalParameter
value: 0.0

030979
type: LocalParameter
units: 333928
value: 0.101139

030978
type: LocalParameter
value: 0.0

030976
type: LocalParameter
units: 333928
value: 999999.0

030975
type: LocalParameter
units: 333928
value: -999999.0

380356
type: SpeciesReference
stoichiometry: 1.0
species: 024155

024155
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Glyceraldehyde_3_phosphate_

380344
type: SpeciesReference
stoichiometry: 1.0
species: 023993

023993
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Dihydroxyacetone_phosphate_

023338
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_trans_Octadec_2_enoyl_acyl_carrier_protein_

024008
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Dihydropteroate_

024716
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Phosphate_

025767
type: Reaction
name: R_flavin_reductase
notes: GENE_ASSOCIATION: lp_0829 PROTEIN_ASSOCIATION: NfrA SUBSYSTEM: S_ PROTEIN_CLASS: 1.5.1.30
product: 352007
reactant: 351971
fast: false
product: 351995
reactant: 351983
kinetic law: 352019
reversible: false
reactant: 351959

352007
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stoichiometry: 1.0
species: 024836

024836
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Reduced_riboflavin_

351971
type: SpeciesReference
stoichiometry: 1.0
species: 024587

351995
type: SpeciesReference
stoichiometry: 1.0
species: 024584

351983
type: SpeciesReference
stoichiometry: 1.0
species: 024839

028403
type: LocalParameter
value: 0.0

028402
type: LocalParameter
units: 333928
value: 0.0

028401
type: LocalParameter
value: 0.0

028400
type: LocalParameter
units: 333928
value: 999999.0

028398
type: LocalParameter
units: 333928
value: 0.0

351959
type: SpeciesReference
stoichiometry: 1.0
species: 024329

023972
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Diglucosyl_diacylglycerol_

024908
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Spermidine_

023284
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_2_methylbutanol_

025806
type: Reaction
fast: false
reactant: 354488
product: 354501
kinetic law: 354525
product: 354513
reversible: true
notes: GENE_ASSOCIATION: ( lp_1612 or lp_0866 ) PROTEIN_ASSOCIATION: ( Gmk1 ) or ( Gmk2 ) SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.4.8
reactant: 354476
name: R_guanylate_kinase__GMPdATP_

354488
type: SpeciesReference
stoichiometry: 1.0
species: 024293

354501
type: SpeciesReference
stoichiometry: 1.0
species: 023936

023936
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_dADP_

028618
type: LocalParameter
value: 0.0

028617
type: LocalParameter
units: 333928
value: 0.0

028616
type: LocalParameter
value: 0.0

028615
type: LocalParameter
units: 333928
value: 999999.0

028614
type: LocalParameter
units: 333928
value: -999999.0

354513
type: SpeciesReference
stoichiometry: 1.0
species: 024203

354476
type: SpeciesReference
stoichiometry: 1.0
species: 023945

023945
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_dATP_

024341
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Hexadecanoyl_acyl_carrier_protein_

025644
type: Reaction
kinetic law: 347901
product: 347889
reactant: 347877
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_3_methylbutanoic_acid_exchange

027697
type: LocalParameter
value: -1.0

027696
type: LocalParameter
units: 333928
value: 0.0

027694
type: LocalParameter
value: 0.0

027693
type: LocalParameter
units: 333928
value: 999999.0

027692
type: LocalParameter
units: 333928
value: 0.0

347889
type: SpeciesReference
stoichiometry: 1.0
species: 025199

025199
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_3_methylbutanoic_acid_

347877
type: SpeciesReference
stoichiometry: 1.0
species: 023411

023411
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_3_methylbutanoic_acid_

025807
type: Reaction
name: R_D_gluconate_transport_via_proton_symport__reversible
reactant: 354537
kinetic law: 354586
fast: false
reversible: true
product: 354562
product: 354574
notes: GENE_ASSOCIATION: lp_1249 PROTEIN_ASSOCIATION: GntP SUBSYSTEM: S_Transport PROTEIN_CLASS:
reactant: 354550

354537
type: SpeciesReference
stoichiometry: 1.0
species: 024218

024218
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_D_Gluconate_

028624
type: LocalParameter
value: 0.0

028623
type: LocalParameter
units: 333928
value: 0.0

028621
type: LocalParameter
value: 0.0

028620
type: LocalParameter
units: 333928
value: 999999.0

028619
type: LocalParameter
units: 333928
value: -999999.0

354562
type: SpeciesReference
stoichiometry: 1.0
species: 024215

024215
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Gluconate_

354574
type: SpeciesReference
stoichiometry: 1.0
species: 024329

354550
type: SpeciesReference
stoichiometry: 1.0
species: 024332

025055
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Tryptophanyl_tRNA_Trp__

025645
type: Reaction
kinetic law: 347937
product: 347925
reactant: 347913
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_3_methylbutanal_exchange

027704
type: LocalParameter
value: -0.5

027703
type: LocalParameter
units: 333928
value: 0.0

027702
type: LocalParameter
value: 0.0

027701
type: LocalParameter
units: 333928
value: 999999.0

027699
type: LocalParameter
units: 333928
value: 0.0

347925
type: SpeciesReference
stoichiometry: 1.0
species: 025202

025202
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_3_methylbutanal_

347913
type: SpeciesReference
stoichiometry: 1.0
species: 023417

025812
type: Reaction
reactant: 354842
reactant: 354830
notes: GENE_ASSOCIATION: ( lp_0021 and lp_0022 ) PROTEIN_ASSOCIATION: ( GlgC and GlgD ) SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.7.27
reactant: 354854
fast: false
reversible: false
kinetic law: 354891
product: 354866
product: 354878
name: R_glucose_1_phosphate_adenylyltransferase

354842
type: SpeciesReference
stoichiometry: 1.0
species: 024152

024152
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Glucose_1_phosphate_

354830
type: SpeciesReference
stoichiometry: 1.0
species: 023825

354854
type: SpeciesReference
stoichiometry: 1.0
species: 024329

028650
type: LocalParameter
value: 0.0

028648
type: LocalParameter
units: 333928
value: 0.0

028647
type: LocalParameter
value: 0.0

028646
type: LocalParameter
units: 333928
value: 999999.0

028645
type: LocalParameter
units: 333928
value: 0.0

354866
type: SpeciesReference
stoichiometry: 1.0
species: 023720

023720
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_ADPglucose_

354878
type: SpeciesReference
stoichiometry: 1.0
species: 024734

024731
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Prephenate_

025537
type: Reaction
fast: false
reactant: 341501
product: 341538
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Central_Metabolism PROTEIN_CLASS: 1.1.1.4
name: R__R_R__butanediol_dehydrogenase
product: 341514
reactant: 341489
kinetic law: 341550
reversible: true
product: 341526

341501
type: SpeciesReference
stoichiometry: 1.0
species: 024578

341538
type: SpeciesReference
stoichiometry: 1.0
species: 024581

341514
type: SpeciesReference
stoichiometry: 1.0
species: 023699

023699
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M__R__Acetoin_

341489
type: SpeciesReference
stoichiometry: 1.0
species: 023828

023828
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M__R_R__2_3_Butanediol_

027083
type: LocalParameter
value: 0.0

027082
type: LocalParameter
units: 333928
value: 0.0

027081
type: LocalParameter
value: 0.0

027080
type: LocalParameter
units: 333928
value: 999999.0

027079
type: LocalParameter
units: 333928
value: -999999.0

341526
type: SpeciesReference
stoichiometry: 1.0
species: 024329

025401
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Spermidine_

026328
type: Reaction
product: 380128
kinetic law: 380140
reactant: 380091
reversible: false
product: 380116
name: R_thiamine_diphosphokinase
fast: false
notes: GENE_ASSOCIATION: lp_1622 PROTEIN_ASSOCIATION: Lp_1622 SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.7.6.2
reactant: 380079
product: 380103

380128
type: SpeciesReference
stoichiometry: 1.0
species: 024962

024962
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Thiamine_diphosphate_

030954
type: LocalParameter
value: -4.8

030953
type: LocalParameter
units: 333928
value: 0.0

030951
type: LocalParameter
value: 0.0

030950
type: LocalParameter
units: 333928
value: 999999.0

030949
type: LocalParameter
units: 333928
value: 0.0

380091
type: SpeciesReference
stoichiometry: 1.0
species: 024953

024953
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Thiamin_

380116
type: SpeciesReference
stoichiometry: 1.0
species: 024329

380079
type: SpeciesReference
stoichiometry: 1.0
species: 023825

380103
type: SpeciesReference
stoichiometry: 1.0
species: 023771

026082
type: Reaction
reversible: true
reactant: 366640
name: R_nucleoside_diphosphate_kinase__ATPUDP_
reactant: 366628
fast: false
product: 366664
product: 366652
kinetic law: 366676
notes: GENE_ASSOCIATION: lp_0242 PROTEIN_ASSOCIATION: Ynk1 SUBSYSTEM: S_Nucleotide_Salvage_Pathways PROTEIN_CLASS: 2.7.4.6

366640
type: SpeciesReference
stoichiometry: 1.0
species: 025103

025103
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_UDP_

366628
type: SpeciesReference
stoichiometry: 1.0
species: 023825

366664
type: SpeciesReference
stoichiometry: 1.0
species: 025145

366652
type: SpeciesReference
stoichiometry: 1.0
species: 023717

029664
type: LocalParameter
value: 0.0

029663
type: LocalParameter
units: 333928
value: 4.71E-4

029661
type: LocalParameter
value: 0.0

029660
type: LocalParameter
units: 333928
value: 999999.0

029658
type: LocalParameter
units: 333928
value: -999999.0

025374
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Nitrate_

026265
type: Reaction
kinetic law: 376835
product: 376823
reactant: 376811
notes: GENE_ASSOCIATION: lp_1621 PROTEIN_ASSOCIATION: Rpe SUBSYSTEM: S_ PROTEIN_CLASS: 5.1.3.1
fast: false
reversible: true
name: R_ribulose_5_phosphate_3_epimerase

030633
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value: 0.0

030632
type: LocalParameter
units: 333928
value: 0.007581

030630
type: LocalParameter
value: 0.0

030629
type: LocalParameter
units: 333928
value: 999999.0

030628
type: LocalParameter
units: 333928
value: -999999.0

376823
type: SpeciesReference
stoichiometry: 1.0
species: 025169

025169
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Xylulose_5_phosphate_

376811
type: SpeciesReference
stoichiometry: 1.0
species: 024854

024854
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Ribulose_5_phosphate_

025884
type: Reaction
kinetic law: 359038
fast: false
reactant: 358990
product: 359026
reversible: false
reactant: 359002
product: 359014
name: R_histidine_decarboxylase
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.1.1.22

028976
type: LocalParameter
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028975
type: LocalParameter
units: 333928
value: 1.77E-4

028974
type: LocalParameter
value: 0.0

028973
type: LocalParameter
units: 333928
value: 999999.0

028972
type: LocalParameter
units: 333928
value: 0.0

358990
type: SpeciesReference
stoichiometry: 1.0
species: 024329

359026
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stoichiometry: 1.0
species: 024356

024356
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Histamine_

359002
type: SpeciesReference
stoichiometry: 1.0
species: 024347

024347
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Histidine_

359014
type: SpeciesReference
stoichiometry: 1.0
species: 023897

025801
type: Reaction
reactant: 354128
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS: 2.3.1.15
kinetic law: 354188
name: R_glycerol_3_phosphate_acyltransferase__Lb_plantarum_specific_
product: 354176
reactant: 354092
reactant: 354104
reversible: false
reactant: 354140
reactant: 354116
reactant: 354152
fast: false
reactant: 354079
product: 354164

354128
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stoichiometry: 0.26
species: 024341

028592
type: LocalParameter
value: 0.0

028591
type: LocalParameter
units: 333928
value: 4.2E-5

028590
type: LocalParameter
value: 0.0

028589
type: LocalParameter
units: 333928
value: 999999.0

028588
type: LocalParameter
units: 333928
value: 0.0

354176
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stoichiometry: 0.01
species: 023726

023726
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_1_Acyl_sn_glycerol_3_phosphate__Lb_plantarum_specific__

354092
type: SpeciesReference
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species: 023236

354104
type: SpeciesReference
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species: 023906

354140
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species: 024629

024629
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Octadecanoyl_acyl_carrier_protein_

354116
type: SpeciesReference
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species: 024266

354152
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species: 024938

354079
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species: 023233

023233
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_cis_Hexadec_2_enoyl_acyl_carrier_protein_

354164
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species: 023693

025526
type: Reaction
name: R_aspartate_transaminase
product: 340825
reactant: 340801
product: 340837
fast: false
reactant: 340813
notes: GENE_ASSOCIATION: lp_1739 PROTEIN_ASSOCIATION: AspB1 SUBSYSTEM: S_ PROTEIN_CLASS: 2.6.1.1
reversible: true
kinetic law: 340849

340825
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stoichiometry: 1.0
species: 023492

023492
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_4_Hydroxy_2_oxoglutarate_

340801
type: SpeciesReference
stoichiometry: 1.0
species: 023495

023495
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_4_Hydroxy_L_glutamate_

340837
type: SpeciesReference
stoichiometry: 1.0
species: 024239

340813
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species: 023741

027020
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027019
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units: 333928
value: 0.0

027018
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value: 0.0

027017
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units: 333928
value: 999999.0

027016
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units: 333928
value: -999999.0

026142
type: Reaction
reversible: false
name: R_6_phospho_beta_glucosidase
kinetic law: 369855
fast: false
reactant: 369819
product: 369843
product: 369831
notes: GENE_ASSOCIATION: ( lp_3011 or lp_0440 or lp_2777 or lp_2778 ) PROTEIN_ASSOCIATION: ( Pbg6 ) or ( Pbg1 ) or ( Pbg4 ) or ( Pbg5 ) SUBSYSTEM: S_ PROTEIN_CLASS: 3.2.1.86
reactant: 369807

029990
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029989
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units: 333928
value: 0.0

029987
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value: 0.0

029986
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units: 333928
value: 999999.0

029985
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units: 333928
value: 0.0

369819
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stoichiometry: 1.0
species: 024320

369843
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species: 024209

369831
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stoichiometry: 1.0
species: 024176

024176
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Glucose_6_phosphate_

369807
type: SpeciesReference
stoichiometry: 1.0
species: 023555

023555
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_6_Phospho_beta_D_glucosyl__1_4__D_glucose_

025415
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Valine_

025617
type: Reaction
reactant: 346593
product: 346629
notes: GENE_ASSOCIATION: lp_1510 PROTEIN_ASSOCIATION: CoaE SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.1.24
name: R_dephospho_CoA_kinase
kinetic law: 346654
reversible: false
product: 346617
product: 346641
fast: false
reactant: 346605

346593
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stoichiometry: 1.0
species: 023825

346629
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species: 023903

027547
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027546
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units: 333928
value: 0.0

027544
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value: 0.0

027543
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units: 333928
value: 999999.0

027542
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units: 333928
value: 0.0

346617
type: SpeciesReference
stoichiometry: 1.0
species: 023717

346641
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stoichiometry: 1.0
species: 024329

346605
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stoichiometry: 1.0
species: 024032

024032
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Dephospho_CoA_

025348
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_D_Lactate_

024845
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Rhamnulose_1_phosphate_

025010
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_tRNA_Gly__

025214
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Acetate_

025485
type: Reaction
name: R_phosphoribosylaminoimidazole_carboxylase
product: 338141
reactant: 338129
reversible: false
fast: false
product: 338154
kinetic law: 338166
reactant: 338117
notes: GENE_ASSOCIATION: ( ( lp_2728 and lp_2729 ) or ( lp_1141 and lp_2729 ) ) PROTEIN_ASSOCIATION: ( PurEK1 ) or ( PurEK2 ) SUBSYSTEM: S_ PROTEIN_CLASS: 4.1.1.21

338141
type: SpeciesReference
stoichiometry: 1.0
species: 023525

023525
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_5_amino_1__5_phospho_D_ribosyl_imidazole_4_carboxylate_

338129
type: SpeciesReference
stoichiometry: 1.0
species: 023897

338154
type: SpeciesReference
stoichiometry: 1.0
species: 024329

026789
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value: 0.0

026788
type: LocalParameter
units: 333928
value: 2.2E-4

026787
type: LocalParameter
value: 0.0

026786
type: LocalParameter
units: 333928
value: 999999.0

026784
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units: 333928
value: 0.0

338117
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stoichiometry: 1.0
species: 023738

023738
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_5_amino_1__5_phospho_D_ribosyl_imidazole_

024059
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_dTTP_

026301
type: Reaction
kinetic law: 378755
product: 378743
product: 378730
reactant: 378718
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_teichoic_acid_peptidoglycan_ligase

030822
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value: 0.0

030821
type: LocalParameter
units: 333928
value: 6.0E-6

030819
type: LocalParameter
value: 0.0

030818
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units: 333928
value: 999999.0

030817
type: LocalParameter
units: 333928
value: 0.0

378743
type: SpeciesReference
stoichiometry: 1.0
species: 025100

378730
type: SpeciesReference
stoichiometry: 1.0
species: 023606

023606
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_teichoic_acid_containing_ribitol_P_

378718
type: SpeciesReference
stoichiometry: 1.0
species: 025124

025124
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_undecaprenyl_teichoic_acid_with_ribitol_

026079
type: Reaction
reactant: 366410
reversible: false
notes: GENE_ASSOCIATION: lp_0566 PROTEIN_ASSOCIATION: NadE SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 6.3.1.5
product: 366448
reactant: 366422
name: R_NAD_synthase__nh4_
kinetic law: 366484
reactant: 366397
product: 366435
product: 366472
fast: false
product: 366460

366410
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stoichiometry: 1.0
species: 024029

024029
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Deamino_NAD_

366448
type: SpeciesReference
stoichiometry: 1.0
species: 024329

366422
type: SpeciesReference
stoichiometry: 1.0
species: 024599

029644
type: LocalParameter
value: 0.0

029642
type: LocalParameter
units: 333928
value: 1.0E-6

029641
type: LocalParameter
value: 0.0

029640
type: LocalParameter
units: 333928
value: 999999.0

029639
type: LocalParameter
units: 333928
value: 0.0

366397
type: SpeciesReference
stoichiometry: 1.0
species: 023825

366435
type: SpeciesReference
stoichiometry: 1.0
species: 023771

366472
type: SpeciesReference
stoichiometry: 1.0
species: 024734

366460
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stoichiometry: 1.0
species: 024578

025160
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Xanthine_

026135
type: Reaction
kinetic law: 369481
product: 369469
reactant: 369457
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_phenylethylalcohol_transport

029950
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value: 0.0

029949
type: LocalParameter
units: 333928
value: 8.1E-4

029947
type: LocalParameter
value: 0.0

029946
type: LocalParameter
units: 333928
value: 999999.0

029945
type: LocalParameter
units: 333928
value: -999999.0

369469
type: SpeciesReference
stoichiometry: 1.0
species: 024674

024674
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Phenylethyl_alcohol_

369457
type: SpeciesReference
stoichiometry: 1.0
species: 024671

024671
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Phenylethyl_alcohol_

023483
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_4_Amino_2_methyl_5_phosphomethylpyrimidine_

025187
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_2_methylpropanoic_acid_

024899
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Sulfate_

025721
type: Reaction
kinetic law: 350449
product: 350437
reactant: 350424
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Ammonium_exchange

028144
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value: 2.533333

028143
type: LocalParameter
units: 333928
value: 0.018981

028142
type: LocalParameter
value: 0.0

028141
type: LocalParameter
units: 333928
value: 0.018981

028139
type: LocalParameter
units: 333928
value: 0.01553

350437
type: SpeciesReference
stoichiometry: 1.0
species: 025372

025372
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Ammonium_

350424
type: SpeciesReference
stoichiometry: 1.0
species: 024602

025722
type: Reaction
kinetic law: 350486
product: 350473
reactant: 350461
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Nitrite_exchange

028150
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value: 0.0

028149
type: LocalParameter
units: 333928
value: 0.0

028148
type: LocalParameter
value: 0.0

028146
type: LocalParameter
units: 333928
value: 0.0

028145
type: LocalParameter
units: 333928
value: 0.0

350473
type: SpeciesReference
stoichiometry: 1.0
species: 025373

025373
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Nitrite_

350461
type: SpeciesReference
stoichiometry: 1.0
species: 024611

024611
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Nitrite_

025289
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Folate_

023735
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_5_Amino_1__5_Phospho_D_ribosyl_imidazole_4_carboxamide_

026230
type: Reaction
product: 374942
reactant: 374930
name: R_pyruvate_kinase
reactant: 374918
fast: false
notes: GENE_ASSOCIATION: lp_1897 PROTEIN_ASSOCIATION: Pyk SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.1.40
kinetic law: 374966
product: 374954
reversible: false
reactant: 374906

374942
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stoichiometry: 1.0
species: 023825

374930
type: SpeciesReference
stoichiometry: 1.0
species: 024677

374918
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stoichiometry: 1.0
species: 024329

030452
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030450
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units: 333928
value: 0.100121

030449
type: LocalParameter
value: 0.0

030447
type: LocalParameter
units: 333928
value: 999999.0

030446
type: LocalParameter
units: 333928
value: 0.0

374954
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stoichiometry: 1.0
species: 024803

374906
type: SpeciesReference
stoichiometry: 1.0
species: 023717

026375
type: Reaction
product: 383051
product: 383039
notes: GENE_ASSOCIATION: lp_2710 PROTEIN_ASSOCIATION: PbuX SUBSYSTEM: S_Transport PROTEIN_CLASS:
reactant: 383015
kinetic law: 383063
reversible: false
reactant: 383027
fast: false
name: R_xanthine_transport_in_via_proton_symport

383051
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stoichiometry: 1.0
species: 025157

383039
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stoichiometry: 1.0
species: 024329

383015
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stoichiometry: 1.0
species: 024332

031232
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031231
type: LocalParameter
units: 333928
value: 0.0

031229
type: LocalParameter
value: 0.0

031228
type: LocalParameter
units: 333928
value: 999999.0

031227
type: LocalParameter
units: 333928
value: 0.0

383027
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stoichiometry: 1.0
species: 025160

024104
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N2_Formyl_N1__5_phospho_D_ribosyl_glycinamide_

024800
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Pyridoxine_

023927
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Cysteinyl_tRNA_Cys__

025604
type: Reaction
reversible: true
reactant: 345831
reactant: 345819
fast: false
notes: GENE_ASSOCIATION: lp_2699 PROTEIN_ASSOCIATION: PyrD SUBSYSTEM: S_ PROTEIN_CLASS: 1.3.1.14
kinetic law: 345880
product: 345868
product: 345843
name: R_dihydoorotic_acid_dehydrogenase__NAD_
product: 345855

345831
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species: 024578

345819
type: SpeciesReference
stoichiometry: 1.0
species: 024002

027470
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027469
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units: 333928
value: 5.9E-5

027468
type: LocalParameter
value: 0.0

027467
type: LocalParameter
units: 333928
value: 999999.0

027465
type: LocalParameter
units: 333928
value: -999999.0

345868
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stoichiometry: 1.0
species: 024641

345843
type: SpeciesReference
stoichiometry: 1.0
species: 024329

345855
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species: 024581

024050
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_dTDP_4_dehydro_6_deoxy_L_mannose_

025576
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product: 344092
product: 344080
kinetic law: 344117
reversible: false
notes: GENE_ASSOCIATION: lp_1562 PROTEIN_ASSOCIATION: Udk SUBSYSTEM: S_ PROTEIN_CLASS:
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reactant: 344056
fast: false
product: 344105
name: R_cytidine_kinase__GTP_

344092
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stoichiometry: 1.0
species: 024203

344080
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species: 023894

027298
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027297
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units: 333928
value: 0.0

027296
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027295
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units: 333928
value: 999999.0

027294
type: LocalParameter
units: 333928
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344068
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stoichiometry: 1.0
species: 024308

344056
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stoichiometry: 1.0
species: 023930

023930
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Cytidine_

344105
type: SpeciesReference
stoichiometry: 1.0
species: 024329

025798
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notes: GENE_ASSOCIATION: lp_0789 PROTEIN_ASSOCIATION: GapB SUBSYSTEM: S_ PROTEIN_CLASS: 1.2.1.12
product: 353959
product: 353983
fast: false
name: R_glyceraldehyde_3_phosphate_dehydrogenase__NAD_
kinetic law: 353995
product: 353971
reversible: true
reactant: 353934
reactant: 353946
reactant: 353922

353959
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species: 023195

023195
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3_Phospho_D_glyceroyl_phosphate_

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species: 024581

028582
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028581
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units: 333928
value: 0.213544

028580
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028579
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units: 333928
value: 999999.0

028578
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units: 333928
value: -999999.0

353971
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353934
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species: 024578

353946
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species: 024713

353922
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species: 024155

025680
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kinetic law: 349107
product: 349095
reactant: 349083
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Fucose_exchange

027908
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027907
type: LocalParameter
units: 333928
value: 0.0

027905
type: LocalParameter
value: 0.0

027904
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units: 333928
value: 999999.0

027903
type: LocalParameter
units: 333928
value: 0.0

349095
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stoichiometry: 1.0
species: 025298

025298
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Fucose_

349083
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species: 024143

024143
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boundary condition: false
has only substance units: false
initial concentration: NaN
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in compartment: 023192
name: M_L_Fucose_

025799
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product: 354043
reactant: 354007
product: 354055
fast: false
notes: GENE_ASSOCIATION: lp_2721 PROTEIN_ASSOCIATION: PurN SUBSYSTEM: S_ PROTEIN_CLASS: 2.1.2.2
product: 354031
reactant: 354019
kinetic law: 354067
reversible: true
name: R_phosphoribosylglycinamide_formyltransferase

354043
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stoichiometry: 1.0
species: 024329

354007
type: SpeciesReference
stoichiometry: 1.0
species: 023194

023194
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_10_Formyltetrahydrofolate_

354055
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stoichiometry: 1.0
species: 024944

024944
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_5_6_7_8_Tetrahydrofolate_

354031
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species: 024104

354019
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stoichiometry: 1.0
species: 024197

024197
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N1__5_Phospho_D_ribosyl_glycinamide_

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028586
type: LocalParameter
units: 333928
value: 2.2E-4

028585
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value: 0.0

028584
type: LocalParameter
units: 333928
value: 999999.0

028583
type: LocalParameter
units: 333928
value: -999999.0

025681
type: Reaction
kinetic law: 349143
product: 349131
reactant: 349119
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Galactitol_exchange

027915
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value: 0.0

027914
type: LocalParameter
units: 333928
value: 0.0

027913
type: LocalParameter
value: 0.0

027912
type: LocalParameter
units: 333928
value: 999999.0

027910
type: LocalParameter
units: 333928
value: 0.0

349131
type: SpeciesReference
stoichiometry: 1.0
species: 025301

025301
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Galactitol_

349119
type: SpeciesReference
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species: 024188

024188
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Galactitol_

023750
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Alanine_

025573
type: Reaction
product: 343959
reversible: false
product: 343935
reactant: 343899
fast: false
product: 343947
name: R_menaquinol_oxidase__71_protons_
kinetic law: 343971
reactant: 343911
reactant: 343923
notes: GENE_ASSOCIATION: ( ( lp_1125 and lp_1126 ) and lp_1128 and lp_1129 ) PROTEIN_ASSOCIATION: ( CydAB and CydC and CydD ) SUBSYSTEM: S_ PROTEIN_CLASS:

343959
type: SpeciesReference
stoichiometry: 2.0
species: 024332

343935
type: SpeciesReference
stoichiometry: 1.0
species: 024320

343899
type: SpeciesReference
stoichiometry: 2.0
species: 024329

343947
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stoichiometry: 1.0
species: 024560

027286
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value: 0.166667

027285
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units: 333928
value: 0.0

027284
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value: 0.0

027283
type: LocalParameter
units: 333928
value: 0.0

027282
type: LocalParameter
units: 333928
value: 0.0

343911
type: SpeciesReference
stoichiometry: 1.0
species: 024557

024557
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Menaquinol_7_

343923
type: SpeciesReference
stoichiometry: 0.5
species: 024620

025792
type: Reaction
kinetic law: 353576
product: 353564
reactant: 353552
notes: GENE_ASSOCIATION: ( lp_1731 or lp_3487 or lp_0826 ) PROTEIN_ASSOCIATION: ( GalM2 ) or ( GalM3 ) or ( GalM1 ) SUBSYSTEM: S_ PROTEIN_CLASS: 5.1.3.3
fast: false
reversible: true
name: R_aldose_1_epimerase

028551
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value: 0.0

028550
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units: 333928
value: 0.0

028549
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value: 0.0

028548
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units: 333928
value: 999999.0

028547
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units: 333928
value: -999999.0

353564
type: SpeciesReference
stoichiometry: 1.0
species: 023615

353552
type: SpeciesReference
stoichiometry: 1.0
species: 024182

025838
type: Reaction
fast: false
product: 356407
reactant: 356371
notes: GENE_ASSOCIATION: ( lp_1964 and lp_1965 ) PROTEIN_ASSOCIATION: GlyQS SUBSYSTEM: S_ PROTEIN_CLASS: 6.1.1.14
product: 356395
kinetic law: 356443
reversible: false
product: 356431
reactant: 356359
product: 356419
name: R_Glycyl_tRNA_synthetase
reactant: 356383

356407
type: SpeciesReference
stoichiometry: 1.0
species: 024290

024290
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Glycyl_tRNA_Gly__

356371
type: SpeciesReference
stoichiometry: 1.0
species: 024251

356395
type: SpeciesReference
stoichiometry: 1.0
species: 023771

028764
type: LocalParameter
value: 0.0

028762
type: LocalParameter
units: 333928
value: 6.3E-5

028761
type: LocalParameter
value: 0.0

028760
type: LocalParameter
units: 333928
value: 999999.0

028759
type: LocalParameter
units: 333928
value: 0.0

356431
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stoichiometry: 1.0
species: 024734

356359
type: SpeciesReference
stoichiometry: 1.0
species: 023825

356419
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stoichiometry: 1.0
species: 024329

356383
type: SpeciesReference
stoichiometry: 1.0
species: 025010

024890
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Shikimate_

025334
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_H2O_

024617
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Nitrate_

025459
type: Reaction
kinetic law: 336360
product: 336348
reactant: 336336
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R__R__acetoin_diffusion

026631
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value: 0.0

026630
type: LocalParameter
units: 333928
value: -7.08E-4

026629
type: LocalParameter
value: 0.0

026628
type: LocalParameter
units: 333928
value: 999999.0

026626
type: LocalParameter
units: 333928
value: -999999.0

336348
type: SpeciesReference
stoichiometry: 1.0
species: 023699

336336
type: SpeciesReference
stoichiometry: 1.0
species: 023702

023702
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M__R__Acetoin_

026292
type: Reaction
product: 378282
name: R_succinate_semialdehyde_dehydrogenase__NAD_
kinetic law: 378319
product: 378306
reversible: false
product: 378294
reactant: 378246
reactant: 378270
fast: false
notes: GENE_ASSOCIATION: lp_3092 PROTEIN_ASSOCIATION: GabD SUBSYSTEM: S_ PROTEIN_CLASS: 1.2.1.16
reactant: 378258

378282
type: SpeciesReference
stoichiometry: 2.0
species: 024329

030777
type: LocalParameter
value: -4.033333

030775
type: LocalParameter
units: 333928
value: 0.0

030774
type: LocalParameter
value: 0.0

030772
type: LocalParameter
units: 333928
value: 999999.0

030771
type: LocalParameter
units: 333928
value: 0.0

378306
type: SpeciesReference
stoichiometry: 1.0
species: 024917

378294
type: SpeciesReference
stoichiometry: 1.0
species: 024581

378246
type: SpeciesReference
stoichiometry: 1.0
species: 024320

378270
type: SpeciesReference
stoichiometry: 1.0
species: 024932

378258
type: SpeciesReference
stoichiometry: 1.0
species: 024578

024566
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Sodium_

026040
type: Reaction
reactant: 364252
product: 364300
reversible: false
product: 364312
reactant: 364276
kinetic law: 364324
notes: GENE_ASSOCIATION: lp_1675 PROTEIN_ASSOCIATION: P_2.3.1.41 SUBSYSTEM: S_ PROTEIN_CLASS: 2.3.1.41
product: 364288
fast: false
reactant: 364264
name: R_Hexadecanoyl_acyl_carrier_proteinmalonyl_acyl_carrier_protein__C_acyltransferase

364252
type: SpeciesReference
stoichiometry: 1.0
species: 024329

364300
type: SpeciesReference
stoichiometry: 1.0
species: 023693

364312
type: SpeciesReference
stoichiometry: 1.0
species: 023897

364276
type: SpeciesReference
stoichiometry: 1.0
species: 024485

029428
type: LocalParameter
value: 0.0

029427
type: LocalParameter
units: 333928
value: 4.9E-5

029425
type: LocalParameter
value: 0.0

029424
type: LocalParameter
units: 333928
value: 999999.0

029423
type: LocalParameter
units: 333928
value: 0.0

364288
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stoichiometry: 1.0
species: 023450

023450
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3_Oxooctadecanoyl_acp_

364264
type: SpeciesReference
stoichiometry: 1.0
species: 024341

024992
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_tRNA_Ala__

026101
type: Reaction
reactant: 367638
kinetic law: 367676
reactant: 367625
reactant: 367612
notes: GENE_ASSOCIATION: ( lp_0760 or lp_0766 or lp_1925 or lp_1941 or lp_3449 or lp_1350 ) PROTEIN_ASSOCIATION: ( Nox1 ) or ( Nox2 ) or ( Nox3 ) or ( Nox4 ) or ( Nox5 ) or ( Nox6 ) SUBSYSTEM: S_ PROTEIN_CLASS:
product: 367652
reversible: false
product: 367664
fast: false
name: R_NADH_oxidase__H2O_forming_

367638
type: SpeciesReference
stoichiometry: 1.0
species: 024620

029769
type: LocalParameter
value: -1.0

029768
type: LocalParameter
units: 333928
value: 0.0

029766
type: LocalParameter
value: 0.0

029765
type: LocalParameter
units: 333928
value: 999999.0

029764
type: LocalParameter
units: 333928
value: 0.0

367625
type: SpeciesReference
stoichiometry: 2.0
species: 024581

367612
type: SpeciesReference
stoichiometry: 2.0
species: 024329

367652
type: SpeciesReference
stoichiometry: 2.0
species: 024320

367664
type: SpeciesReference
stoichiometry: 2.0
species: 024578

026215
type: Reaction
reversible: false
product: 374145
kinetic law: 374194
product: 374182
fast: false
reactant: 374133
name: R_putrescine_transport_via_ABC_system
notes: GENE_ASSOCIATION: ( lp_0318 and lp_0317 and lp_0316 and lp_0315 ) PROTEIN_ASSOCIATION: ( PotA and PotB and PotC and PotDec ) SUBSYSTEM: S_Transport__Extracellular PROTEIN_CLASS:
product: 374170
reactant: 374107
product: 374158
reactant: 374120

374145
type: SpeciesReference
stoichiometry: 1.0
species: 023717

030373
type: LocalParameter
value: -1.0

030372
type: LocalParameter
units: 333928
value: 0.0

030371
type: LocalParameter
value: 0.0

030369
type: LocalParameter
units: 333928
value: 999999.0

030368
type: LocalParameter
units: 333928
value: 0.0

374182
type: SpeciesReference
stoichiometry: 1.0
species: 024776

024776
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Putrescine_

374133
type: SpeciesReference
stoichiometry: 1.0
species: 024779

374170
type: SpeciesReference
stoichiometry: 1.0
species: 024713

374107
type: SpeciesReference
stoichiometry: 1.0
species: 023825

374158
type: SpeciesReference
stoichiometry: 1.0
species: 024329

374120
type: SpeciesReference
stoichiometry: 1.0
species: 024320

026212
type: Reaction
fast: false
reversible: true
name: R_phosphotransacetylase
product: 373999
kinetic law: 374023
product: 374011
notes: GENE_ASSOCIATION: lp_0807 PROTEIN_ASSOCIATION: Pta SUBSYSTEM: S_ PROTEIN_CLASS: 2.3.1.8
reactant: 373987
reactant: 373974

373999
type: SpeciesReference
stoichiometry: 1.0
species: 023705

023705
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Acetyl_phosphate_

030361
type: LocalParameter
value: 0.0

030359
type: LocalParameter
units: 333928
value: 0.05139

030358
type: LocalParameter
value: 0.0

030356
type: LocalParameter
units: 333928
value: 999999.0

030355
type: LocalParameter
units: 333928
value: -999999.0

374011
type: SpeciesReference
stoichiometry: 1.0
species: 023903

373987
type: SpeciesReference
stoichiometry: 1.0
species: 024713

373974
type: SpeciesReference
stoichiometry: 1.0
species: 023639

026296
type: Reaction
reactant: 378490
kinetic law: 378526
notes: GENE_ASSOCIATION: ( lp_0952 or lp_0055 or lp_1425 or lp_3491 ) PROTEIN_ASSOCIATION: ( Lp_0952 ) or ( Lp_0055 ) or ( Lp_1425 ) or ( Lp_3491 ) SUBSYSTEM: S_ PROTEIN_CLASS: 1.3.5.1
name: R_succinate_dehydrogenase__menaquinone_7_
reactant: 378478
product: 378502
reversible: true
fast: false
product: 378514

378490
type: SpeciesReference
stoichiometry: 1.0
species: 024917

030796
type: LocalParameter
value: 0.0

030795
type: LocalParameter
units: 333928
value: 0.0

030793
type: LocalParameter
value: 0.0

030792
type: LocalParameter
units: 333928
value: 999999.0

030790
type: LocalParameter
units: 333928
value: -999999.0

378478
type: SpeciesReference
stoichiometry: 1.0
species: 024560

378502
type: SpeciesReference
stoichiometry: 1.0
species: 024146

378514
type: SpeciesReference
stoichiometry: 1.0
species: 024557

025831
type: Reaction
fast: false
reactant: 356126
reactant: 356114
reversible: true
product: 356138
kinetic law: 356163
product: 356151
name: R_glycolate_transport_via_proton_symport__reversible
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:

356126
type: SpeciesReference
stoichiometry: 1.0
species: 024332

356114
type: SpeciesReference
stoichiometry: 1.0
species: 024281

024281
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Glycolate_

356138
type: SpeciesReference
stoichiometry: 1.0
species: 024278

024278
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Glycolate_

028736
type: LocalParameter
value: 0.0

028735
type: LocalParameter
units: 333928
value: 0.0

028734
type: LocalParameter
value: 0.0

028733
type: LocalParameter
units: 333928
value: 999999.0

028732
type: LocalParameter
units: 333928
value: -999999.0

356151
type: SpeciesReference
stoichiometry: 1.0
species: 024329

025669
type: Reaction
kinetic law: 348744
product: 348732
reactant: 348720
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Cytosine_exchange

027844
type: LocalParameter
value: 0.0

027843
type: LocalParameter
units: 333928
value: 0.0

027842
type: LocalParameter
value: 0.0

027841
type: LocalParameter
units: 333928
value: 999999.0

027840
type: LocalParameter
units: 333928
value: 0.0

348732
type: SpeciesReference
stoichiometry: 1.0
species: 025268

025268
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Cytosine_

348720
type: SpeciesReference
stoichiometry: 1.0
species: 023912

026297
type: Reaction
kinetic law: 378586
product: 378562
reactant: 378550
name: R_alpha_glucoside_glucohydrolase
product: 378574
reversible: false
notes: GENE_ASSOCIATION: lp_3220 PROTEIN_ASSOCIATION: Agl4 SUBSYSTEM: S_ PROTEIN_CLASS: 3.2.1.48
reactant: 378538
fast: false

030803
type: LocalParameter
value: 0.0

030801
type: LocalParameter
units: 333928
value: 0.0

030800
type: LocalParameter
value: 0.0

030798
type: LocalParameter
units: 333928
value: 999999.0

030797
type: LocalParameter
units: 333928
value: 0.0

378562
type: SpeciesReference
stoichiometry: 1.0
species: 024134

024134
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Fructose_

378550
type: SpeciesReference
stoichiometry: 1.0
species: 024926

024926
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Sucrose_

378574
type: SpeciesReference
stoichiometry: 1.0
species: 024209

378538
type: SpeciesReference
stoichiometry: 1.0
species: 024320

024233
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Glutamate_5_semialdehyde_

026034
type: Reaction
reactant: 363831
reactant: 363843
product: 363879
name: R_Hexanoyl_acyl_carrier_proteinmalonyl_acyl_carrier_protein_C_acyltransferase
notes: GENE_ASSOCIATION: lp_1675 PROTEIN_ASSOCIATION: P_2.3.1.41 SUBSYSTEM: S_ PROTEIN_CLASS: 2.3.1.41
fast: false
kinetic law: 363904
reversible: false
reactant: 363855
product: 363891
product: 363867

363831
type: SpeciesReference
stoichiometry: 1.0
species: 024329

363843
type: SpeciesReference
stoichiometry: 1.0
species: 024344

024344
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Hexanoyl_acyl_carrier_protein_

363879
type: SpeciesReference
stoichiometry: 1.0
species: 023693

029398
type: LocalParameter
value: 0.0

029396
type: LocalParameter
units: 333928
value: 8.3E-5

029395
type: LocalParameter
value: 0.0

029394
type: LocalParameter
units: 333928
value: 999999.0

029393
type: LocalParameter
units: 333928
value: 0.0

363855
type: SpeciesReference
stoichiometry: 1.0
species: 024485

363891
type: SpeciesReference
stoichiometry: 1.0
species: 023897

363867
type: SpeciesReference
stoichiometry: 1.0
species: 023447

023447
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3_Oxooctanoyl_acyl_carrier_protein_

026174
type: Reaction
product: 371278
notes: GENE_ASSOCIATION: ( lp_2591 or lp_2825 or lp_0363 ) PROTEIN_ASSOCIATION: P_3.2.2.1 SUBSYSTEM: S_ PROTEIN_CLASS: 3.2.2.1
reactant: 371253
reactant: 371241
fast: false
reversible: false
kinetic law: 371290
name: R_purine_nucleosidase__adenosine_
product: 371265

371278
type: SpeciesReference
stoichiometry: 1.0
species: 024830

371253
type: SpeciesReference
stoichiometry: 1.0
species: 024320

371241
type: SpeciesReference
stoichiometry: 1.0
species: 023714

023714
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Adenosine_

030153
type: LocalParameter
value: -3.966667

030151
type: LocalParameter
units: 333928
value: 0.0

030150
type: LocalParameter
value: 0.0

030148
type: LocalParameter
units: 333928
value: 999999.0

030147
type: LocalParameter
units: 333928
value: 0.0

371265
type: SpeciesReference
stoichiometry: 1.0
species: 023708

023507
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_4_Methyl_2_oxopentanoate_

023278
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_2_Methylbutanal_

026028
type: Reaction
product: 363552
kinetic law: 363576
name: R_maltose_transport_in_via_proton_symport
reversible: false
reactant: 363528
fast: false
notes: GENE_ASSOCIATION: lp_1729 PROTEIN_ASSOCIATION: Lp_1729 SUBSYSTEM: S_ PROTEIN_CLASS:
reactant: 363540
product: 363564

363552
type: SpeciesReference
stoichiometry: 1.0
species: 024329

029367
type: LocalParameter
value: 0.0

029366
type: LocalParameter
units: 333928
value: 0.0

029365
type: LocalParameter
value: 0.0

029364
type: LocalParameter
units: 333928
value: 999999.0

029363
type: LocalParameter
units: 333928
value: 0.0

363528
type: SpeciesReference
stoichiometry: 1.0
species: 024332

363540
type: SpeciesReference
stoichiometry: 1.0
species: 024494

024494
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Maltose_

363564
type: SpeciesReference
stoichiometry: 1.0
species: 024491

024491
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Maltose_

026289
type: Reaction
reactant: 378030
product: 378066
product: 378042
kinetic law: 378078
reversible: false
reactant: 378018
product: 378054
fast: false
name: R_O_acetylhomoserine_lysase__L_cysteine_
notes: GENE_ASSOCIATION: lp_2634 PROTEIN_ASSOCIATION: MetB SUBSYSTEM: S_ PROTEIN_CLASS: 4.2.99.9

378030
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stoichiometry: 1.0
species: 023918

378066
type: SpeciesReference
stoichiometry: 1.0
species: 024329

378042
type: SpeciesReference
stoichiometry: 1.0
species: 023624

030757
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030756
type: LocalParameter
units: 333928
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030754
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030753
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value: 999999.0

030752
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units: 333928
value: 0.0

378018
type: SpeciesReference
stoichiometry: 1.0
species: 023669

023669
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_O_Acetyl_L_homoserine_

378054
type: SpeciesReference
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species: 023924

023924
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Cystathionine_

024872
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Sorbitol_

025759
type: Reaction
kinetic law: 351610
product: 351598
reactant: 351586
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Valine_exchange

028352
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value: 2.366667

028351
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units: 333928
value: -4.38E-4

028350
type: LocalParameter
value: 0.0

028348
type: LocalParameter
units: 333928
value: -4.38E-4

028347
type: LocalParameter
units: 333928
value: -5.36E-4

351598
type: SpeciesReference
stoichiometry: 1.0
species: 025415

351586
type: SpeciesReference
stoichiometry: 1.0
species: 025151

025151
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Valine_

025540
type: Reaction
reactant: 341684
kinetic law: 341721
product: 341708
fast: false
reversible: false
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
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reactant: 341672
product: 341696

341684
type: SpeciesReference
stoichiometry: 1.0
species: 024332

027100
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value: 0.0

027099
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units: 333928
value: 0.0

027098
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value: 0.0

027097
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units: 333928
value: 999999.0

027095
type: LocalParameter
units: 333928
value: 0.0

341708
type: SpeciesReference
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species: 024329

341672
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species: 023837

023837
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Biotin_

341696
type: SpeciesReference
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species: 023834

023834
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Biotin_

025419
type: Reaction
kinetic law: 334148
product: 334135
reactant: 334123
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_2_methylbutanal_transport

026400
type: LocalParameter
value: 0.0

026399
type: LocalParameter
units: 333928
value: 0.0

026398
type: LocalParameter
value: 0.0

026397
type: LocalParameter
units: 333928
value: 999999.0

026396
type: LocalParameter
units: 333928
value: -999999.0

334135
type: SpeciesReference
stoichiometry: 1.0
species: 023281

023281
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_2_Methylbutanal_

334123
type: SpeciesReference
stoichiometry: 1.0
species: 023278

025115
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_UDP_N_acetylmuramoyl_L_alanyl_D_gamma_glutamyl_meso_2_6_diaminopimelate_

026017
type: Reaction
kinetic law: 362930
product: 362918
reversible: false
product: 362906
reactant: 362870
reactant: 362846
notes: GENE_ASSOCIATION: lp_0550 PROTEIN_ASSOCIATION: LysS SUBSYSTEM: S_ PROTEIN_CLASS: 6.1.1.6
reactant: 362858
name: R_Lysyl_tRNA_synthetase
product: 362882
product: 362894
fast: false

029307
type: LocalParameter
value: 0.0

029306
type: LocalParameter
units: 333928
value: 5.6E-5

029305
type: LocalParameter
value: 0.0

029304
type: LocalParameter
units: 333928
value: 999999.0

029303
type: LocalParameter
units: 333928
value: 0.0

362918
type: SpeciesReference
stoichiometry: 1.0
species: 024734

362906
type: SpeciesReference
stoichiometry: 1.0
species: 024476

024476
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Lysine_tRNA__Lys__

362870
type: SpeciesReference
stoichiometry: 1.0
species: 025022

025022
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_tRNA_Lys__

362846
type: SpeciesReference
stoichiometry: 1.0
species: 023825

362858
type: SpeciesReference
stoichiometry: 1.0
species: 024467

362882
type: SpeciesReference
stoichiometry: 1.0
species: 023771

362894
type: SpeciesReference
stoichiometry: 1.0
species: 024329

025424
type: Reaction
reactant: 334331
product: 334391
fast: false
reversible: true
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
product: 334379
reactant: 334355
reactant: 334343
kinetic law: 334403
product: 334367
name: R_2_methylpropanal_dehydrogenase__acid_forming_

334331
type: SpeciesReference
stoichiometry: 1.0
species: 023299

334391
type: SpeciesReference
stoichiometry: 1.0
species: 024581

334379
type: SpeciesReference
stoichiometry: 2.0
species: 024329

334355
type: SpeciesReference
stoichiometry: 1.0
species: 024578

334343
type: SpeciesReference
stoichiometry: 1.0
species: 024320

026427
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value: 0.0

026426
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units: 333928
value: 0.0

026424
type: LocalParameter
value: 0.0

026423
type: LocalParameter
units: 333928
value: 999999.0

026422
type: LocalParameter
units: 333928
value: -999999.0

334367
type: SpeciesReference
stoichiometry: 1.0
species: 023293

023293
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_2_methylpropanoic_acid_

025385
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Phosphate_

024698
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Phenylalanyl_tRNA_Phe__

025034
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_tRNA_Ser__

025531
type: Reaction
product: 341175
name: R_L_aspartate_transport_in_via_proton_symport
kinetic law: 341199
reversible: false
reactant: 341163
reactant: 341151
fast: false
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
product: 341187

341175
type: SpeciesReference
stoichiometry: 1.0
species: 023813

027051
type: LocalParameter
value: 0.0

027050
type: LocalParameter
units: 333928
value: 0.0

027049
type: LocalParameter
value: 0.0

027047
type: LocalParameter
units: 333928
value: 999999.0

027046
type: LocalParameter
units: 333928
value: 0.0

341163
type: SpeciesReference
stoichiometry: 1.0
species: 024332

341151
type: SpeciesReference
stoichiometry: 1.0
species: 023816

023816
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Aspartate_

341187
type: SpeciesReference
stoichiometry: 1.0
species: 024329

026325
type: Reaction
product: 379971
reactant: 379947
product: 379959
reversible: false
reactant: 379935
fast: false
notes: GENE_ASSOCIATION: lp_2379 PROTEIN_ASSOCIATION: Tdk SUBSYSTEM: S_Nucleotide_Salvage_Pathways PROTEIN_CLASS: 2.7.1.21
kinetic law: 379995
name: R_thymidine_kinase__ATPthymidine_
product: 379983

379971
type: SpeciesReference
stoichiometry: 1.0
species: 024056

024056
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_dTMP_

379947
type: SpeciesReference
stoichiometry: 1.0
species: 024974

379959
type: SpeciesReference
stoichiometry: 1.0
species: 023717

379935
type: SpeciesReference
stoichiometry: 1.0
species: 023825

030941
type: LocalParameter
value: 0.0

030940
type: LocalParameter
units: 333928
value: 7.0E-6

030938
type: LocalParameter
value: 0.0

030935
type: LocalParameter
units: 333928
value: 999999.0

030934
type: LocalParameter
units: 333928
value: 0.0

379983
type: SpeciesReference
stoichiometry: 1.0
species: 024329

026098
type: Reaction
fast: false
name: R_nitrite_transport_out_via_proton_antiport
reversible: false
reactant: 367380
reactant: 367392
kinetic law: 367428
notes: GENE_ASSOCIATION: lp_1481 PROTEIN_ASSOCIATION: NarK SUBSYSTEM: S_Transport PROTEIN_CLASS:
product: 367416
product: 367404

367380
type: SpeciesReference
stoichiometry: 1.0
species: 024608

367392
type: SpeciesReference
stoichiometry: 1.0
species: 024332

029749
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029748
type: LocalParameter
units: 333928
value: 0.0

029747
type: LocalParameter
value: 0.0

029745
type: LocalParameter
units: 333928
value: 999999.0

029744
type: LocalParameter
units: 333928
value: 0.0

367416
type: SpeciesReference
stoichiometry: 1.0
species: 024611

367404
type: SpeciesReference
stoichiometry: 1.0
species: 024329

025640
type: Reaction
kinetic law: 347793
product: 347781
reactant: 347768
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_2_methylpropanal_exchange

027678
type: LocalParameter
value: -0.5

027677
type: LocalParameter
units: 333928
value: 0.0

027675
type: LocalParameter
value: 0.0

027674
type: LocalParameter
units: 333928
value: 999999.0

027673
type: LocalParameter
units: 333928
value: 0.0

347781
type: SpeciesReference
stoichiometry: 1.0
species: 025190

025190
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_2_methylpropanal_

347768
type: SpeciesReference
stoichiometry: 1.0
species: 023302

025898
type: Reaction
product: 359809
name: R__3R__3_Hydroxyoctanoyl_acyl_carrier_proteinNADP_oxidoreductase
notes: GENE_ASSOCIATION: lp_1674 PROTEIN_ASSOCIATION: FabG1 SUBSYSTEM: S_ PROTEIN_CLASS: 1.1.1.100
kinetic law: 359821
fast: false
reactant: 359772
reversible: false
reactant: 359760
reactant: 359784
product: 359797

359809
type: SpeciesReference
stoichiometry: 1.0
species: 024584

029041
type: LocalParameter
value: 0.0

029040
type: LocalParameter
units: 333928
value: 8.3E-5

029039
type: LocalParameter
value: 0.0

029038
type: LocalParameter
units: 333928
value: 999999.0

029037
type: LocalParameter
units: 333928
value: 0.0

359772
type: SpeciesReference
stoichiometry: 1.0
species: 024329

359760
type: SpeciesReference
stoichiometry: 1.0
species: 023447

359784
type: SpeciesReference
stoichiometry: 1.0
species: 024587

359797
type: SpeciesReference
stoichiometry: 1.0
species: 023390

023390
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M__R__3_Hydroxyoctanoyl_acyl_carrier_protein_

026099
type: Reaction
product: 367489
reactant: 367440
name: R_nitrate_transport_via_ABC_system
fast: false
reactant: 367452
reactant: 367464
kinetic law: 367525
product: 367477
notes: GENE_ASSOCIATION: ( lp_2076 and lp_2077 ) PROTEIN_ASSOCIATION: NO3abc SUBSYSTEM: S_Transport PROTEIN_CLASS:
product: 367513
reversible: false
product: 367501

367489
type: SpeciesReference
stoichiometry: 1.0
species: 024329

367440
type: SpeciesReference
stoichiometry: 1.0
species: 023825

367452
type: SpeciesReference
stoichiometry: 1.0
species: 024320

367464
type: SpeciesReference
stoichiometry: 1.0
species: 024617

029756
type: LocalParameter
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029755
type: LocalParameter
units: 333928
value: 0.0

029753
type: LocalParameter
value: 0.0

029752
type: LocalParameter
units: 333928
value: 999999.0

029750
type: LocalParameter
units: 333928
value: 0.0

367477
type: SpeciesReference
stoichiometry: 1.0
species: 023717

367513
type: SpeciesReference
stoichiometry: 1.0
species: 024713

367501
type: SpeciesReference
stoichiometry: 1.0
species: 024614

026322
type: Reaction
kinetic law: 379923
notes: GENE_ASSOCIATION: ( lp_3538 or lp_1083 or lp_3135 ) PROTEIN_ASSOCIATION: ( Tkt4 ) or ( Tkt2 ) or ( Tkt3 ) SUBSYSTEM: S_ PROTEIN_CLASS: 2.2.1.1
product: 379911
fast: false
reactant: 379874
reactant: 379886
name: R_transketolase
product: 379898
reversible: true

030933
type: LocalParameter
value: 0.0

030932
type: LocalParameter
units: 333928
value: -0.003461

030930
type: LocalParameter
value: 0.0

030929
type: LocalParameter
units: 333928
value: 999999.0

030928
type: LocalParameter
units: 333928
value: -999999.0

379911
type: SpeciesReference
stoichiometry: 1.0
species: 024155

379874
type: SpeciesReference
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species: 024077

024077
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Erythrose_4_phosphate_

379886
type: SpeciesReference
stoichiometry: 1.0
species: 025169

379898
type: SpeciesReference
stoichiometry: 1.0
species: 024095

025353
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Lactose_

026262
type: Reaction
name: R_ribonucleoside_triphosphate_reductase__CTP_
notes: GENE_ASSOCIATION: ( lp_2673 or lp_2932 ) PROTEIN_ASSOCIATION: ( NrdI ) or ( NrdD ) SUBSYSTEM: S_Nucleotide_Salvage_Pathways PROTEIN_CLASS: 1.17.4.2
reactant: 376666
reversible: false
product: 376690
kinetic law: 376726
fast: false
reactant: 376678
product: 376702
product: 376714

376666
type: SpeciesReference
stoichiometry: 1.0
species: 023915

376690
type: SpeciesReference
stoichiometry: 1.0
species: 023960

030620
type: LocalParameter
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030619
type: LocalParameter
units: 333928
value: 6.0E-6

030617
type: LocalParameter
value: 0.0

030616
type: LocalParameter
units: 333928
value: 999999.0

030615
type: LocalParameter
units: 333928
value: 0.0

376678
type: SpeciesReference
stoichiometry: 1.0
species: 024983

024983
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Reduced_thioredoxin_

376702
type: SpeciesReference
stoichiometry: 1.0
species: 024320

376714
type: SpeciesReference
stoichiometry: 1.0
species: 024980

024980
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Oxidized_thioredoxin_

023645
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N_Acetyl_L_glutamyl_5_phosphate_

025631
type: Reaction
kinetic law: 347500
reactant: 347450
product: 347476
reversible: false
reactant: 347463
fast: false
name: R_exopolyphosphatase
product: 347488
notes: GENE_ASSOCIATION: ( lp_0841 or lp_0446 or lp_0843 ) PROTEIN_ASSOCIATION: ( Ppx2 ) or ( Ppx1 ) or ( Ppx3 ) SUBSYSTEM: S_Other PROTEIN_CLASS: 3.6.1.11

027625
type: LocalParameter
value: -0.333333

027624
type: LocalParameter
units: 333928
value: 0.0

027622
type: LocalParameter
value: 0.0

027621
type: LocalParameter
units: 333928
value: 999999.0

027619
type: LocalParameter
units: 333928
value: 0.0

347450
type: SpeciesReference
stoichiometry: 1.0
species: 024320

347476
type: SpeciesReference
stoichiometry: 2.0
species: 024329

347463
type: SpeciesReference
stoichiometry: 1.0
species: 024725

024725
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Polyphosphate_

347488
type: SpeciesReference
stoichiometry: 1.0
species: 024713

025523
type: Reaction
kinetic law: 340680
product: 340667
reactant: 340655
notes: GENE_ASSOCIATION: lp_1523 PROTEIN_ASSOCIATION: RacD SUBSYSTEM: S_ PROTEIN_CLASS: 5.1.1.13
fast: false
reversible: true
name: R_aspartase_racemase

027003
type: LocalParameter
value: 0.0

027002
type: LocalParameter
units: 333928
value: 0.0

027001
type: LocalParameter
value: 0.0

027000
type: LocalParameter
units: 333928
value: 999999.0

026999
type: LocalParameter
units: 333928
value: -999999.0

340667
type: SpeciesReference
stoichiometry: 1.0
species: 023813

340655
type: SpeciesReference
stoichiometry: 1.0
species: 023810

023810
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Aspartate_

025908
type: Reaction
product: 360435
kinetic law: 360447
name: R_homoserine_kinase
reversible: false
product: 360411
reactant: 360399
reactant: 360387
fast: false
product: 360423
notes: GENE_ASSOCIATION: lp_0572 PROTEIN_ASSOCIATION: ThrB SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.1.39

360435
type: SpeciesReference
stoichiometry: 1.0
species: 024707

024707
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_O_Phospho_L_homoserine_

029091
type: LocalParameter
value: -3.833333

029090
type: LocalParameter
units: 333928
value: 0.0

029089
type: LocalParameter
value: 0.0

029088
type: LocalParameter
units: 333928
value: 999999.0

029086
type: LocalParameter
units: 333928
value: 0.0

360411
type: SpeciesReference
stoichiometry: 1.0
species: 023717

360399
type: SpeciesReference
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species: 024374

360387
type: SpeciesReference
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species: 023825

360423
type: SpeciesReference
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species: 024329

023561
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_capsular_polysaccharide_linkage_unit__LPL_specific_

025524
type: Reaction
kinetic law: 340729
product: 340716
product: 340704
reactant: 340692
notes: GENE_ASSOCIATION: lp_2830 PROTEIN_ASSOCIATION: AnsB SUBSYSTEM: S_Alanine_and_aspartate_metabolism PROTEIN_CLASS: 4.3.1.1
fast: false
reversible: false
name: R_L_aspartase

027010
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value: -0.5

027009
type: LocalParameter
units: 333928
value: 0.0

027008
type: LocalParameter
value: 0.0

027007
type: LocalParameter
units: 333928
value: 999999.0

027005
type: LocalParameter
units: 333928
value: 0.0

340716
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species: 024599

340704
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species: 024146

340692
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species: 023813

024005
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Dihydroneopterin_monophosphate_

025746
type: Reaction
kinetic law: 351211
product: 351199
reactant: 351187
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Sulfate_exchange

028280
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value: 0.0

028276
type: LocalParameter
units: 333928
value: 0.0

028275
type: LocalParameter
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028274
type: LocalParameter
units: 333928
value: 999999.0

028272
type: LocalParameter
units: 333928
value: 0.0

351199
type: SpeciesReference
stoichiometry: 1.0
species: 025400

025400
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Sulfate_

351187
type: SpeciesReference
stoichiometry: 1.0
species: 024902

024902
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Sulfate_

024701
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boundary condition: false
has only substance units: false
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initial amount: NaN
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name: M_Phenyl_lactate_

026140
type: Reaction
reversible: false
product: 369699
fast: false
product: 369687
reactant: 369675
notes: GENE_ASSOCIATION: ( lp_0203 or lp_0785 or lp_2790 ) PROTEIN_ASSOCIATION: SerA SUBSYSTEM: S_ PROTEIN_CLASS: 1.1.1.95
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name: R_phosphoglycerate_dehydrogenase
product: 369711
reactant: 369662

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species: 023459

023459
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initial concentration: NaN
initial amount: NaN
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name: M_3_Phosphohydroxypyruvate_

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species: 024578

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029975
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029973
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029972
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029971
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023456
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3_Phospho_D_glycerate_

026072
type: Reaction
reversible: true
name: R_methylenetetrahydrofolate_dehydrogenase__NADP_
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reactant: 366022
product: 366058
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fast: false
reactant: 366034

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species: 024527

024527
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_5_10_Methenyltetrahydrofolate_

366022
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species: 024539

024539
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_5_10_Methylenetetrahydrofolate_

366058
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species: 024587

029578
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029576
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029575
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029573
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029572
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366034
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species: 024584

025340
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boundary condition: true
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initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Histamine_

024653
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Phenylacetaldehyde_

026251
type: Reaction
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name: R_rhamnulokinase
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kinetic law: 376032
reversible: false
reactant: 375984
notes: GENE_ASSOCIATION: lp_3595 PROTEIN_ASSOCIATION: RhaB SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.1.5
product: 375996
product: 376008
reactant: 375971

376020
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species: 024845

030562
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030561
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030559
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030558
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030557
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units: 333928
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species: 024848

024848
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_L_Rhamnulose_

375996
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species: 023717

376008
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species: 024329

375971
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species: 023825

024815
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initial concentration: NaN
initial amount: NaN
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name: M_Raffinose_

025624
type: Reaction
kinetic law: 347052
product: 347040
reactant: 347004
notes: GENE_ASSOCIATION: lp_0703 PROTEIN_ASSOCIATION: Tmk SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.4.9
reactant: 347016
name: R_dTMP_kinase
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product: 347028
fast: false

027583
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027582
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units: 333928
value: 7.0E-6

027581
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027580
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value: 999999.0

027578
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units: 333928
value: -999999.0

347040
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stoichiometry: 1.0
species: 024044

024044
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_dTDP_

347004
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species: 023825

347016
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species: 024056

347028
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stoichiometry: 1.0
species: 023717

025367
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Mn2_

025726
type: Reaction
kinetic law: 350630
product: 350618
reactant: 350606
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Phenylacetaldehyde_exchange

028176
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028175
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units: 333928
value: 0.0

028174
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028173
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units: 333928
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028171
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units: 333928
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350618
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species: 025379

025379
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Phenylacetaldehyde_

350606
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species: 024656

024656
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Phenylacetaldehyde_

025482
type: Reaction
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product: 337948
reactant: 337909
name: R_adenosylhomocysteine_nucleosidase
notes: GENE_ASSOCIATION: lp_2181 PROTEIN_ASSOCIATION: Mtn SUBSYSTEM: S_Methionine_Metabolism PROTEIN_CLASS: 3.2.2.9
product: 337935
fast: false
kinetic law: 337961
reactant: 337922

337948
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stoichiometry: 1.0
species: 024827

024827
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_S_Ribosyl_L_homocysteine_

337909
type: SpeciesReference
stoichiometry: 1.0
species: 023729

337935
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species: 023708

026770
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026769
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units: 333928
value: 1.33E-4

026768
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value: 0.0

026767
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026766
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units: 333928
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337922
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species: 024320

025016
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_tRNA_Ile__

025483
type: Reaction
reactant: 337973
product: 338033
product: 337997
notes: GENE_ASSOCIATION: ( lp_3492 or lp_1072 or lp_2936 ) PROTEIN_ASSOCIATION: ( ApbE3 ) or ( ApbE1 ) or ( ApbE2 ) SUBSYSTEM: S_ PROTEIN_CLASS:
reactant: 337985
reversible: false
fast: false
product: 338021
kinetic law: 338045
name: R_4_amino_5_hydroxymethyl_2_methylpyrimidine_synthetase
product: 338009

337973
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species: 023738

338033
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species: 024713

337997
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stoichiometry: 1.0
species: 023480

023480
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_4_Amino_5_hydroxymethyl_2_methylpyrimidine_

337985
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stoichiometry: 1.0
species: 024320

338021
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stoichiometry: 0.5
species: 024620

026777
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026776
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value: 0.0

026775
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026774
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units: 333928
value: 999999.0

026772
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units: 333928
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338009
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species: 024200

024200
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Glycolaldehyde_

024440
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_D_Lactate_

026246
type: Reaction
kinetic law: 375799
product: 375787
product: 375775
reactant: 375763
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: PROTEIN_CLASS:
fast: false
reversible: false
name: R_S_ribosylhomocysteine_cleavage_enzyme

030536
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030535
type: LocalParameter
units: 333928
value: 1.33E-4

030533
type: LocalParameter
value: 0.0

030532
type: LocalParameter
units: 333928
value: 999999.0

030531
type: LocalParameter
units: 333928
value: 0.0

375787
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stoichiometry: 1.0
species: 024338

024338
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Homocysteine_

375775
type: SpeciesReference
stoichiometry: 1.0
species: 024011

024011
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_4_5_dihydroxy_2_3_pentanedione_

375763
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stoichiometry: 1.0
species: 024827

026061
type: Reaction
reversible: false
fast: false
reactant: 365390
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Carbohydrate_Metabolism PROTEIN_CLASS: 3.1.3.22
reactant: 365402
product: 365414
product: 365427
kinetic law: 365439
name: R_mannitol_1_phosphatase

365390
type: SpeciesReference
stoichiometry: 1.0
species: 024320

365402
type: SpeciesReference
stoichiometry: 1.0
species: 024548

024548
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Mannitol_1_phosphate_

365414
type: SpeciesReference
stoichiometry: 1.0
species: 024551

024551
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Mannitol_

365427
type: SpeciesReference
stoichiometry: 1.0
species: 024713

029524
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029523
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units: 333928
value: 0.0

029522
type: LocalParameter
value: 0.0

029521
type: LocalParameter
units: 333928
value: 999999.0

029520
type: LocalParameter
units: 333928
value: 0.0

025594
type: Reaction
product: 345277
product: 345265
kinetic law: 345289
reversible: false
notes: GENE_ASSOCIATION: ( lp_1011 or lp_1329 ) PROTEIN_ASSOCIATION: ( Dgk1 ) or ( Dgk2 ) SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.1.113
product: 345253
reactant: 345241
name: R_deoxyguanosine_kinase
fast: false
reactant: 345229

345277
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stoichiometry: 1.0
species: 024329

345265
type: SpeciesReference
stoichiometry: 1.0
species: 023978

023978
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_dGMP_

027403
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027402
type: LocalParameter
units: 333928
value: 0.0

027401
type: LocalParameter
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027400
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027398
type: LocalParameter
units: 333928
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345253
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345241
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species: 023981

023981
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Deoxyguanosine_

345229
type: SpeciesReference
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species: 023825

025863
type: Reaction
kinetic law: 357914
product: 357902
product: 357890
reactant: 357878
notes: GENE_ASSOCIATION: ( lp_1677 or lp_1670 ) PROTEIN_ASSOCIATION: ( FabZ2 ) or ( FabZ1 ) SUBSYSTEM: S_ PROTEIN_CLASS: 4.2.1.58
fast: false
reversible: false
name: R__3R__3_Hydroxybutanoyl_acyl_carrier_protein_hydro_lyase

028880
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028879
type: LocalParameter
units: 333928
value: 8.3E-5

028878
type: LocalParameter
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028877
type: LocalParameter
units: 333928
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028876
type: LocalParameter
units: 333928
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357902
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species: 024320

357890
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stoichiometry: 1.0
species: 023227

357878
type: SpeciesReference
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species: 023377

023377
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M__3R__3_Hydroxybutanoyl_acyl_carrier_protein_

026128
type: Reaction
reactant: 369082
notes: GENE_ASSOCIATION: lp_3251 PROTEIN_ASSOCIATION: P_3.1.4.17 SUBSYSTEM: S_ PROTEIN_CLASS: 3.1.4.17
reversible: false
product: 369094
fast: false
reactant: 369070
kinetic law: 369119
name: R_3__5__cyclic_nucleotide_phosphodiesterase
product: 369107

369082
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species: 024320

369094
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species: 023942

023942
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constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_dAMP_

369070
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species: 023362

023362
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3__5__Cyclic_dAMP_

029912
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029910
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units: 333928
value: 0.0

029909
type: LocalParameter
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029907
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units: 333928
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029906
type: LocalParameter
units: 333928
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369107
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species: 024329

026064
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reactant: 365524
kinetic law: 365561
product: 365536
name: R_mannitol_transport_in_via_proton_symport
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reversible: true
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Carbohydrate_Metabolism PROTEIN_CLASS:
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product: 365548

365524
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species: 024554

029535
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029534
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029533
type: LocalParameter
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029532
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units: 333928
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029531
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units: 333928
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365536
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species: 024329

365511
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species: 024332

365548
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species: 024551

025181
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boundary condition: true
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initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_2_Methylbutanal_

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_5_Methylthio_D_ribose_

026129
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reactant: 369143
product: 369167
kinetic law: 369180
notes: GENE_ASSOCIATION: lp_3251 PROTEIN_ASSOCIATION: P_3.1.4.17 SUBSYSTEM: S_ PROTEIN_CLASS: 3.1.4.17
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name: R_3__5__cyclic_nucleotide_phosphodiesterase
product: 369155
reversible: false

369143
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species: 024320

369167
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species: 024407

024407
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_IMP_

029918
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029917
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value: 0.0

029915
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029914
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units: 333928
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029913
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units: 333928
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369131
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species: 023368

023368
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3__5__Cyclic_IMP_

369155
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species: 024329

026235
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kinetic law: 375232
product: 375220
product: 375207
reactant: 375195
notes: GENE_ASSOCIATION: ( lp_1480 and lp_1492 and lp_1495 ) PROTEIN_ASSOCIATION: MoaABC SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: false
name: R_precursor_Z_synthase

030478
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030476
type: LocalParameter
units: 333928
value: 0.0

030475
type: LocalParameter
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030474
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value: 999999.0

030472
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375220
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species: 024734

375207
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species: 023600

023600
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Precursor_Z_in_molybdenum_cofactor_biosynthesis_

375195
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species: 024308

026122
type: Reaction
kinetic law: 368779
product: 368767
reactant: 368755
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
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reversible: true
name: R_phenylacetaldehyde_transport

029879
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029878
type: LocalParameter
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029877
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029875
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029874
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368767
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species: 024656

368755
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species: 024653

024458
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Leucine_

023765
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Alanyl_tRNA_Ala__

023690
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initial concentration: NaN
initial amount: NaN
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name: M_N2_Acetyl_L_ornithine_

025211
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boundary condition: true
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initial concentration: NaN
initial amount: NaN
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name: M_4_Aminobenzoate_

025857
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kinetic law: 357636
product: 357624
fast: false
product: 357612
reactant: 357588
notes: GENE_ASSOCIATION: lp_3297 PROTEIN_ASSOCIATION: FolE SUBSYSTEM: S_ PROTEIN_CLASS: 3.5.4.16
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product: 357600
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028854
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028853
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value: 0.0

028852
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028851
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028850
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357624
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357612
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species: 024119

024119
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Formate_

357588
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species: 024320

357576
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357600
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species: 023732

023732
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initial concentration: NaN
initial amount: NaN
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name: M_2_Amino_4_hydroxy_6__erythro_1_2_3_trihydroxypropyl_dihydropteridine_triphosphate_

026118
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product: 368611
product: 368623
reactant: 368574
reactant: 368587
reactant: 368562
fast: false
name: R_1_pyrroline_5_carboxylate_dehydrogenase
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.5.1.12
reversible: false
product: 368599
kinetic law: 368635

368611
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species: 024329

368623
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species: 024581

368574
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species: 024320

368587
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stoichiometry: 1.0
species: 024578

368562
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stoichiometry: 1.0
species: 023197

023197
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_1_Pyrroline_5_carboxylate_

368599
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stoichiometry: 1.0
species: 024239

029860
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value: -0.5

029859
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units: 333928
value: 0.0

029857
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value: 0.0

029856
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units: 333928
value: 999999.0

029854
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units: 333928
value: 0.0

023879
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Chorismate_

025713
type: Reaction
kinetic law: 350194
product: 350182
reactant: 350170
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Melibiose_exchange

028097
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value: 0.0

028096
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units: 333928
value: 0.0

028094
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value: 0.0

028093
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units: 333928
value: 999999.0

028092
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units: 333928
value: 0.0

350182
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stoichiometry: 1.0
species: 025361

025361
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Melibiose_

350170
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species: 024509

024509
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Melibiose_

026194
type: Reaction
kinetic law: 372371
product: 372359
reactant: 372347
notes: GENE_ASSOCIATION: lp_1656 PROTEIN_ASSOCIATION: TrpF SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 5.3.1.24
fast: false
reversible: true
name: R_phosphoribosylanthranilate_isomerase

030257
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030255
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units: 333928
value: 0.0

030254
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value: 0.0

030252
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units: 333928
value: 999999.0

030251
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units: 333928
value: -999999.0

372359
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stoichiometry: 1.0
species: 023239

372347
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species: 024743

024743
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N__5_Phospho_D_ribosyl_anthranilate_

026361
type: Reaction
product: 382221
reactant: 382185
fast: false
kinetic law: 382233
reactant: 382173
product: 382209
notes: GENE_ASSOCIATION: lp_0564 PROTEIN_ASSOCIATION: TagA SUBSYSTEM: S_ PROTEIN_CLASS: 2.4.1.187
product: 382197
reversible: false
name: R_N_acetylglucosaminyldiphospho_undecaprenol_N_acetyl_beta_D_mannosaminyltransferase

382221
type: SpeciesReference
stoichiometry: 1.0
species: 025130

025130
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Undecaprenyl_diphospho_N_acetylglucosamine_N_acetylmannosamine_

382185
type: SpeciesReference
stoichiometry: 1.0
species: 025127

025127
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Undecaprenyl_diphospho_N_acetyl_glucosamine_

031153
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value: 0.0

031151
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units: 333928
value: 6.0E-6

031150
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value: 0.0

031148
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units: 333928
value: 999999.0

031147
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units: 333928
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382173
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stoichiometry: 1.0
species: 025079

382209
type: SpeciesReference
stoichiometry: 1.0
species: 025103

382197
type: SpeciesReference
stoichiometry: 1.0
species: 024329

026199
type: Reaction
reactant: 372623
product: 372660
reactant: 372635
product: 372647
name: R_phosphoribosyl_ATP_pyrophosphatase
notes: GENE_ASSOCIATION: lp_2552 PROTEIN_ASSOCIATION: HisE SUBSYSTEM: S_ PROTEIN_CLASS: 3.6.1.31
kinetic law: 372684
reversible: false
fast: false
product: 372672

372623
type: SpeciesReference
stoichiometry: 1.0
species: 024320

372660
type: SpeciesReference
stoichiometry: 1.0
species: 024734

372635
type: SpeciesReference
stoichiometry: 1.0
species: 024749

024749
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_1__5_Phosphoribosyl__ATP_

372647
type: SpeciesReference
stoichiometry: 1.0
species: 024329

030283
type: LocalParameter
value: 0.0

030281
type: LocalParameter
units: 333928
value: 0.0

030280
type: LocalParameter
value: 0.0

030278
type: LocalParameter
units: 333928
value: 999999.0

030277
type: LocalParameter
units: 333928
value: 0.0

372672
type: SpeciesReference
stoichiometry: 1.0
species: 024746

025313
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Glutamate_

025148
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Valine_

025836
type: Reaction
fast: false
reactant: 356299
reactant: 356287
reversible: false
kinetic law: 356347
product: 356323
notes: GENE_ASSOCIATION: ( lp_0834 or lp_0370 ) PROTEIN_ASSOCIATION: ( GlpK2 ) or ( GlpK1 ) SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.1.30
name: R_glycerol_kinase
product: 356335
product: 356311

356299
type: SpeciesReference
stoichiometry: 1.0
species: 024272

356287
type: SpeciesReference
stoichiometry: 1.0
species: 023825

028758
type: LocalParameter
value: -0.5

028757
type: LocalParameter
units: 333928
value: 0.0

028755
type: LocalParameter
value: 0.0

028754
type: LocalParameter
units: 333928
value: 999999.0

028753
type: LocalParameter
units: 333928
value: 0.0

356323
type: SpeciesReference
stoichiometry: 1.0
species: 024266

356335
type: SpeciesReference
stoichiometry: 1.0
species: 024329

356311
type: SpeciesReference
stoichiometry: 1.0
species: 023717

025456
type: Reaction
reactant: 336141
notes: GENE_ASSOCIATION: lp_0488 PROTEIN_ASSOCIATION: ArgEB SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 3.5.1.16
product: 336178
reversible: false
product: 336165
kinetic law: 336190
name: R_acetylornithine_deacetylase
reactant: 336153
fast: false

336141
type: SpeciesReference
stoichiometry: 1.0
species: 023690

336178
type: SpeciesReference
stoichiometry: 1.0
species: 024635

024635
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Ornithine_

336165
type: SpeciesReference
stoichiometry: 1.0
species: 023624

026612
type: LocalParameter
value: 0.0

026611
type: LocalParameter
units: 333928
value: 0.0

026609
type: LocalParameter
value: 0.0

026608
type: LocalParameter
units: 333928
value: 999999.0

026607
type: LocalParameter
units: 333928
value: 0.0

336153
type: SpeciesReference
stoichiometry: 1.0
species: 024320

026290
type: Reaction
notes: GENE_ASSOCIATION: lp_1385 PROTEIN_ASSOCIATION: Lp_1385 SUBSYSTEM: S_Transport PROTEIN_CLASS:
reactant: 378090
product: 378114
reversible: true
kinetic law: 378138
name: R_sulfate_transport_inout_via_sodium_symport
reactant: 378102
fast: false
product: 378126

378090
type: SpeciesReference
stoichiometry: 1.0
species: 024569

378114
type: SpeciesReference
stoichiometry: 1.0
species: 024566

030764
type: LocalParameter
value: 0.0

030762
type: LocalParameter
units: 333928
value: 0.0

030761
type: LocalParameter
value: 0.0

030759
type: LocalParameter
units: 333928
value: 999999.0

030758
type: LocalParameter
units: 333928
value: -999999.0

378102
type: SpeciesReference
stoichiometry: 1.0
species: 024902

378126
type: SpeciesReference
stoichiometry: 1.0
species: 024899

025785
type: Reaction
name: R_L_glutamate_5_semialdehyde_dehydratase__spontaneous_
reactant: 353108
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
product: 353132
kinetic law: 353156
reversible: true
product: 353120
fast: false
product: 353144

353108
type: SpeciesReference
stoichiometry: 1.0
species: 024233

353132
type: SpeciesReference
stoichiometry: 1.0
species: 024329

028511
type: LocalParameter
value: 0.0

028509
type: LocalParameter
units: 333928
value: 0.0

028508
type: LocalParameter
value: 0.0

028507
type: LocalParameter
units: 333928
value: 999999.0

028505
type: LocalParameter
units: 333928
value: -999999.0

353120
type: SpeciesReference
stoichiometry: 1.0
species: 023197

353144
type: SpeciesReference
stoichiometry: 1.0
species: 024320

025286
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Ethanol_

025560
type: Reaction
fast: false
kinetic law: 342886
product: 342862
reactant: 342787
product: 342824
reactant: 342774
name: R_CPS_synthase_complex__LPL_specific
product: 342837
product: 342850
reactant: 342800
product: 342874
reversible: true
notes: GENE_ASSOCIATION: ( ( lp_1177 and lp_1178 and lp_1179 and lp_1180 and lp_1181 and lp_1182 and lp_1183 and lp_1184 and lp_1185 ) or ( lp_1197 and lp_1198 and lp_1199 and lp_1201 and lp_1202 and lp_1203 and lp_1204 and lp_1205 and lp_1206 ) or ( lp_1215 and lp_1216 and lp_1220 and lp_1221 and lp_1222 and lp_1224 and lp_1225 and lp_1226 and lp_1227 ) or ( lp_2099 and lp_2100 and lp_2101 and lp_2102 and lp_2103 and lp_2104 and lp_2106 and lp_2107 and lp_2108 ) ) PROTEIN_ASSOCIATION: ( Cps1 ) or ( Cps2 ) or ( Cps3 ) or ( Cps4 ) SUBSYSTEM: S_ PROTEIN_CLASS:
reactant: 342812

027209
type: LocalParameter
value: 0.0

027208
type: LocalParameter
units: 333928
value: 0.0

027207
type: LocalParameter
value: 0.0

027206
type: LocalParameter
units: 333928
value: 999999.0

027205
type: LocalParameter
units: 333928
value: -999999.0

342862
type: SpeciesReference
stoichiometry: 3.0
species: 025103

342787
type: SpeciesReference
stoichiometry: 5.0
species: 024320

342824
type: SpeciesReference
stoichiometry: 1.0
species: 023564

342774
type: SpeciesReference
stoichiometry: 1.0
species: 024041

024041
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_dTDP_6_deoxy_L_mannose_

342837
type: SpeciesReference
stoichiometry: 1.0
species: 024044

342850
type: SpeciesReference
stoichiometry: 6.0
species: 024329

342800
type: SpeciesReference
stoichiometry: 2.0
species: 025106

025106
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_UDPglucose_

342874
type: SpeciesReference
stoichiometry: 1.0
species: 025121

342812
type: SpeciesReference
stoichiometry: 2.0
species: 025109

025109
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_UDPgalactose_

024413
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Indolelactate_

026354
type: Reaction
reactant: 381727
notes: GENE_ASSOCIATION: lp_0814 PROTEIN_ASSOCIATION: MurB SUBSYSTEM: S_ PROTEIN_CLASS: 1.1.1.158
reversible: false
reactant: 381739
product: 381763
reactant: 381751
kinetic law: 381787
product: 381775
fast: false
name: R_UDP_N_acetylenolpyruvoylglucosamine_reductase

381727
type: SpeciesReference
stoichiometry: 1.0
species: 024329

381739
type: SpeciesReference
stoichiometry: 1.0
species: 024587

381763
type: SpeciesReference
stoichiometry: 1.0
species: 024584

381751
type: SpeciesReference
stoichiometry: 1.0
species: 025073

031106
type: LocalParameter
value: 0.0

031104
type: LocalParameter
units: 333928
value: 6.4E-5

031103
type: LocalParameter
value: 0.0

031101
type: LocalParameter
units: 333928
value: 999999.0

031100
type: LocalParameter
units: 333928
value: 0.0

381775
type: SpeciesReference
stoichiometry: 1.0
species: 025091

025663
type: Reaction
kinetic law: 348562
product: 348550
reactant: 348538
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Benzaldehyde_exchange

027813
type: LocalParameter
value: 0.0

027812
type: LocalParameter
units: 333928
value: 0.0

027811
type: LocalParameter
value: 0.0

027809
type: LocalParameter
units: 333928
value: 999999.0

027808
type: LocalParameter
units: 333928
value: 0.0

348550
type: SpeciesReference
stoichiometry: 1.0
species: 025253

025253
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Benzaldehyde_

348538
type: SpeciesReference
stoichiometry: 1.0
species: 023846

023846
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Benzaldehyde_

026210
type: Reaction
name: R_phosphoserine_phosphatase__L_serine_
reactant: 373865
kinetic law: 373902
fast: false
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS: 3.1.3.3
reactant: 373853
product: 373877
product: 373889
reversible: false

373865
type: SpeciesReference
stoichiometry: 1.0
species: 024773

024773
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_O_Phospho_L_serine_

030348
type: LocalParameter
value: 0.0

030346
type: LocalParameter
units: 333928
value: 0.0

030345
type: LocalParameter
value: 0.0

030343
type: LocalParameter
units: 333928
value: 999999.0

030342
type: LocalParameter
units: 333928
value: 0.0

373853
type: SpeciesReference
stoichiometry: 1.0
species: 024320

373877
type: SpeciesReference
stoichiometry: 1.0
species: 024713

373889
type: SpeciesReference
stoichiometry: 1.0
species: 024878

024878
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Serine_

023672
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Acetyl_maltose_

025442
type: Reaction
notes: GENE_ASSOCIATION: ( lp_3662 or lp_0329 ) PROTEIN_ASSOCIATION: ( AdhE ) or ( AcdH ) SUBSYSTEM: S_ PROTEIN_CLASS: 1.2.1.10
reversible: true
kinetic law: 335453
name: R_acetaldehyde_dehydrogenase__acetylating_
fast: false
reactant: 335380
product: 335417
reactant: 335393
product: 335429
product: 335441
reactant: 335405

026535
type: LocalParameter
value: 0.0

026534
type: LocalParameter
units: 333928
value: -0.012559

026533
type: LocalParameter
value: 0.0

026532
type: LocalParameter
units: 333928
value: 999999.0

026531
type: LocalParameter
units: 333928
value: -999999.0

335380
type: SpeciesReference
stoichiometry: 1.0
species: 023630

335417
type: SpeciesReference
stoichiometry: 1.0
species: 023639

335393
type: SpeciesReference
stoichiometry: 1.0
species: 023903

335429
type: SpeciesReference
stoichiometry: 1.0
species: 024329

335441
type: SpeciesReference
stoichiometry: 1.0
species: 024581

335405
type: SpeciesReference
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species: 024578

026031
type: Reaction
fast: false
product: 363709
reactant: 363697
reactant: 363685
kinetic law: 363734
notes: GENE_ASSOCIATION: ( ( ( lp_0576 and lp_0577 and lp_0586 and lp_0587 ) or ( lp_0575 and lp_0576 and lp_0577 ) ) and lp_1273 and lp_1274 ) PROTEIN_ASSOCIATION: ( EII_man and Hpr and PtsI ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
product: 363721
name: R_D_mannose_transport_via_PEPPyr_PTS
reversible: false

363709
type: SpeciesReference
stoichiometry: 1.0
species: 024500

363697
type: SpeciesReference
stoichiometry: 1.0
species: 024503

024503
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_D_Mannose_

363685
type: SpeciesReference
stoichiometry: 1.0
species: 024677

029386
type: LocalParameter
value: 0.0

029384
type: LocalParameter
units: 333928
value: 0.0

029383
type: LocalParameter
value: 0.0

029381
type: LocalParameter
units: 333928
value: 999999.0

029380
type: LocalParameter
units: 333928
value: 0.0

363721
type: SpeciesReference
stoichiometry: 1.0
species: 024803

026205
type: Reaction
reversible: true
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
reactant: 373596
kinetic law: 373644
fast: false
product: 373632
reactant: 373608
name: R_L_proline_transport_inout_via_proton_symport
product: 373620

373596
type: SpeciesReference
stoichiometry: 1.0
species: 024332

030321
type: LocalParameter
value: 0.0

030320
type: LocalParameter
units: 333928
value: 3.0E-5

030319
type: LocalParameter
value: 0.0

030317
type: LocalParameter
units: 333928
value: 999999.0

030316
type: LocalParameter
units: 333928
value: -999999.0

373632
type: SpeciesReference
stoichiometry: 1.0
species: 024758

024758
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Proline_

373608
type: SpeciesReference
stoichiometry: 1.0
species: 024761

373620
type: SpeciesReference
stoichiometry: 1.0
species: 024329

025778
type: Reaction
kinetic law: 352742
product: 352730
reactant: 352718
reactant: 352706
notes: GENE_ASSOCIATION: lp_1112 PROTEIN_ASSOCIATION: Fum SUBSYSTEM: S_ PROTEIN_CLASS: 4.2.1.2
fast: false
reversible: true
name: R_fumarase

028472
type: LocalParameter
value: 0.0

028471
type: LocalParameter
units: 333928
value: -0.008969

028469
type: LocalParameter
value: 0.0

028468
type: LocalParameter
units: 333928
value: 999999.0

028467
type: LocalParameter
units: 333928
value: -999999.0

352730
type: SpeciesReference
stoichiometry: 1.0
species: 024479

024479
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Malate_

352718
type: SpeciesReference
stoichiometry: 1.0
species: 024320

352706
type: SpeciesReference
stoichiometry: 1.0
species: 024146

026206
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reactant: 373656
product: 373681
notes: GENE_ASSOCIATION: ( lp_0471 or lp_2166 ) PROTEIN_ASSOCIATION: ( Prs1 ) or ( Prs2 ) SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.6.1
fast: false
kinetic law: 373718
name: R_phosphoribosylpyrophosphate_synthetase
product: 373706
reactant: 373669
product: 373694
reversible: true

373656
type: SpeciesReference
stoichiometry: 1.0
species: 023825

373681
type: SpeciesReference
stoichiometry: 1.0
species: 023771

030328
type: LocalParameter
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030327
type: LocalParameter
units: 333928
value: 2.79E-4

030325
type: LocalParameter
value: 0.0

030324
type: LocalParameter
units: 333928
value: 999999.0

030322
type: LocalParameter
units: 333928
value: -999999.0

373706
type: SpeciesReference
stoichiometry: 1.0
species: 024767

373669
type: SpeciesReference
stoichiometry: 1.0
species: 024812

024812
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_alpha_D_Ribose_5_phosphate_

373694
type: SpeciesReference
stoichiometry: 1.0
species: 024329

023462
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_5_O__1_Carboxyvinyl__3_phosphoshikimate_

024851
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Rhamnose_

024185
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Galactitol_1_phosphate_

025655
type: Reaction
kinetic law: 348268
product: 348255
reactant: 348242
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Adenine_exchange

027762
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value: 0.0

027761
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units: 333928
value: 1.33E-4

027760
type: LocalParameter
value: 0.0

027758
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units: 333928
value: 999999.0

027755
type: LocalParameter
units: 333928
value: -0.003275

348255
type: SpeciesReference
stoichiometry: 1.0
species: 025229

025229
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Adenine_

348242
type: SpeciesReference
stoichiometry: 1.0
species: 023711

023711
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Adenine_

026282
type: Reaction
kinetic law: 377703
product: 377691
product: 377679
reactant: 377667
notes: GENE_ASSOCIATION: ( lp_0505 and lp_0506 ) PROTEIN_ASSOCIATION: SdhAB SUBSYSTEM: S_ PROTEIN_CLASS: 4.3.1.17
fast: false
reversible: false
name: R_L_serine_deaminase

030724
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value: 0.0

030723
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units: 333928
value: 0.017589

030722
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value: 0.0

030720
type: LocalParameter
units: 333928
value: 999999.0

030719
type: LocalParameter
units: 333928
value: 0.0

377691
type: SpeciesReference
stoichiometry: 1.0
species: 024803

377679
type: SpeciesReference
stoichiometry: 1.0
species: 024599

377667
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stoichiometry: 1.0
species: 024878

024377
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Hypoxanthine_

025656
type: Reaction
kinetic law: 348307
product: 348294
reactant: 348281
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Alanine_exchange

027769
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value: 3.366667

027768
type: LocalParameter
units: 333928
value: -8.35E-4

027767
type: LocalParameter
value: 0.0

027766
type: LocalParameter
units: 333928
value: -8.35E-4

027764
type: LocalParameter
units: 333928
value: -0.001021

348294
type: SpeciesReference
stoichiometry: 1.0
species: 025232

025232
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Alanine_

348281
type: SpeciesReference
stoichiometry: 1.0
species: 023756

023756
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Alanine_

025241
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Asparagine_

026024
type: Reaction
kinetic law: 363360
product: 363348
reactant: 363336
reactant: 363324
notes: GENE_ASSOCIATION: lp_0174 PROTEIN_ASSOCIATION: Agl1 SUBSYSTEM: S_ PROTEIN_CLASS: 3.2.1.20
fast: false
reversible: false
name: R_alpha_glucosidase

029350
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value: -0.666667

029348
type: LocalParameter
units: 333928
value: 0.0

029347
type: LocalParameter
value: 0.0

029346
type: LocalParameter
units: 333928
value: 999999.0

029345
type: LocalParameter
units: 333928
value: 0.0

363348
type: SpeciesReference
stoichiometry: 2.0
species: 024209

363336
type: SpeciesReference
stoichiometry: 1.0
species: 024491

363324
type: SpeciesReference
stoichiometry: 1.0
species: 024320

025934
type: Reaction
reactant: 361810
name: R_inosine_transport_in_via_proton_symport__reversible
product: 361834
kinetic law: 361858
product: 361846
reactant: 361822
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true

361810
type: SpeciesReference
stoichiometry: 1.0
species: 024332

361834
type: SpeciesReference
stoichiometry: 1.0
species: 024329

029211
type: LocalParameter
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029210
type: LocalParameter
units: 333928
value: 0.0

029209
type: LocalParameter
value: 0.0

029208
type: LocalParameter
units: 333928
value: 999999.0

029207
type: LocalParameter
units: 333928
value: -999999.0

361846
type: SpeciesReference
stoichiometry: 1.0
species: 024425

024425
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Inosine_

361822
type: SpeciesReference
stoichiometry: 1.0
species: 024428

024428
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Inosine_

025409
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Thymidine_

025193
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_2_methylpropanol_

025360
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_D_Mannose_

026093
type: Reaction
kinetic law: 367187
product: 367174
product: 367162
reactant: 367150
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
fast: false
reversible: true
name: R_nh4_Dissociation

029723
type: LocalParameter
value: 0.0

029722
type: LocalParameter
units: 333928
value: 0.018981

029721
type: LocalParameter
value: 0.0

029719
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units: 333928
value: 999999.0

029718
type: LocalParameter
units: 333928
value: -999999.0

367174
type: SpeciesReference
stoichiometry: 1.0
species: 024593

024593
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Ammonia_

367162
type: SpeciesReference
stoichiometry: 1.0
species: 024329

367150
type: SpeciesReference
stoichiometry: 1.0
species: 024599

025639
type: Reaction
kinetic law: 347756
product: 347744
reactant: 347732
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_2_methylpropanoic_acid_exchange

027672
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value: -1.0

027671
type: LocalParameter
units: 333928
value: 0.0

027670
type: LocalParameter
value: 0.0

027668
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units: 333928
value: 999999.0

027667
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units: 333928
value: 0.0

347744
type: SpeciesReference
stoichiometry: 1.0
species: 025187

347732
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stoichiometry: 1.0
species: 023296

023296
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_2_methylpropanoic_acid_

025499
type: Reaction
reactant: 339113
product: 339150
reversible: false
kinetic law: 339162
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Central_Metabolism PROTEIN_CLASS:
reactant: 339101
product: 339138
product: 339126
fast: false
name: R_oxidative_decarboxylation_of_acetolacate__chemical_
reactant: 339088

339113
type: SpeciesReference
stoichiometry: 0.5
species: 024620

339150
type: SpeciesReference
stoichiometry: 1.0
species: 024320

026873
type: LocalParameter
value: 0.0

026872
type: LocalParameter
units: 333928
value: 0.0

026871
type: LocalParameter
value: 0.0

026870
type: LocalParameter
units: 333928
value: 999999.0

026868
type: LocalParameter
units: 333928
value: 0.0

339101
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stoichiometry: 1.0
species: 024329

339138
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stoichiometry: 1.0
species: 024014

024014
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Diacetyl_

339126
type: SpeciesReference
stoichiometry: 1.0
species: 023897

339088
type: SpeciesReference
stoichiometry: 1.0
species: 023759

023759
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M__S__2_Acetolactate_

026276
type: Reaction
reversible: true
product: 377401
fast: false
name: R_D_sorbitol_transport_in_via_proton_symport
kinetic law: 377426
reactant: 377377
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
product: 377413
reactant: 377389

377401
type: SpeciesReference
stoichiometry: 1.0
species: 024329

030692
type: LocalParameter
value: 0.0

030691
type: LocalParameter
units: 333928
value: 0.0

030689
type: LocalParameter
value: 0.0

030688
type: LocalParameter
units: 333928
value: 999999.0

030687
type: LocalParameter
units: 333928
value: -999999.0

377377
type: SpeciesReference
stoichiometry: 1.0
species: 024332

377413
type: SpeciesReference
stoichiometry: 1.0
species: 024866

377389
type: SpeciesReference
stoichiometry: 1.0
species: 024869

024869
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_D_Sorbitol_

025913
type: Reaction
product: 360675
reactant: 360663
reversible: false
notes: GENE_ASSOCIATION: lp_0848 PROTEIN_ASSOCIATION: PbuG SUBSYSTEM: S_Transport PROTEIN_CLASS:
name: R_hypoxanthine_transport_in_via_proton_symport
fast: false
reactant: 360651
kinetic law: 360699
product: 360687

360675
type: SpeciesReference
stoichiometry: 1.0
species: 024329

360663
type: SpeciesReference
stoichiometry: 1.0
species: 024380

024380
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Hypoxanthine_

360651
type: SpeciesReference
stoichiometry: 1.0
species: 024332

029112
type: LocalParameter
value: -3.966667

029111
type: LocalParameter
units: 333928
value: 0.0

029110
type: LocalParameter
value: 0.0

029109
type: LocalParameter
units: 333928
value: 999999.0

029108
type: LocalParameter
units: 333928
value: 0.0

360687
type: SpeciesReference
stoichiometry: 1.0
species: 024377

025751
type: Reaction
kinetic law: 351356
product: 351344
reactant: 351332
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Thiamin_exchange

028306
type: LocalParameter
value: 0.0

028305
type: LocalParameter
units: 333928
value: 0.0

028304
type: LocalParameter
value: 0.0

028303
type: LocalParameter
units: 333928
value: 0.0

028301
type: LocalParameter
units: 333928
value: -1.47E-4

351344
type: SpeciesReference
stoichiometry: 1.0
species: 025406

025406
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Thiamin_

351332
type: SpeciesReference
stoichiometry: 1.0
species: 024956

024956
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Thiamin_

026096
type: Reaction
kinetic law: 367368
fast: false
product: 367356
reactant: 367319
reversible: false
reactant: 367331
name: R_nicotinate_nucleotide_adenylyltransferase
reactant: 367307
product: 367344
notes: GENE_ASSOCIATION: lp_1530 PROTEIN_ASSOCIATION: NadD SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.7.18

029743
type: LocalParameter
value: 0.0

029742
type: LocalParameter
units: 333928
value: 1.0E-6

029740
type: LocalParameter
value: 0.0

029739
type: LocalParameter
units: 333928
value: 999999.0

029737
type: LocalParameter
units: 333928
value: 0.0

367356
type: SpeciesReference
stoichiometry: 1.0
species: 024734

367319
type: SpeciesReference
stoichiometry: 1.0
species: 024329

367331
type: SpeciesReference
stoichiometry: 1.0
species: 024605

024605
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Nicotinate_D_ribonucleotide_

367307
type: SpeciesReference
stoichiometry: 1.0
species: 023825

367344
type: SpeciesReference
stoichiometry: 1.0
species: 024029

025893
type: Reaction
reactant: 359496
kinetic law: 359544
reversible: true
reactant: 359484
product: 359508
product: 359520
product: 359532
notes: GENE_ASSOCIATION: lp_0447 PROTEIN_ASSOCIATION: MvaA SUBSYSTEM: S_Sterol_Biosynthesis PROTEIN_CLASS: 1.1.1.34
fast: false
reactant: 359472
name: R_Hydroxymethylglutaryl_CoA_reductase

359496
type: SpeciesReference
stoichiometry: 2.0
species: 024584

029019
type: LocalParameter
value: 0.0

029018
type: LocalParameter
units: 333928
value: -1.0E-6

029016
type: LocalParameter
value: 0.0

029015
type: LocalParameter
units: 333928
value: 999999.0

029013
type: LocalParameter
units: 333928
value: -999999.0

359484
type: SpeciesReference
stoichiometry: 1.0
species: 024533

024533
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M__R__Mevalonate_

359508
type: SpeciesReference
stoichiometry: 2.0
species: 024329

359520
type: SpeciesReference
stoichiometry: 1.0
species: 024371

359532
type: SpeciesReference
stoichiometry: 2.0
species: 024587

359472
type: SpeciesReference
stoichiometry: 1.0
species: 023903

026154
type: Reaction
product: 370266
fast: false
reversible: false
product: 370278
reactant: 370242
reactant: 370254
name: R_Phosphatidylglycerol_phosphate_phosphatase__LPL_specific_
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS: 3.1.3.27
kinetic law: 370290

370266
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species: 024680

024680
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Phospatidylglycerol__LPL_specific__

370278
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stoichiometry: 1.0
species: 024713

370242
type: SpeciesReference
stoichiometry: 1.0
species: 024320

370254
type: SpeciesReference
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species: 024683

024683
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Phosphatidylglycerophosphate__LPL_specific__

030049
type: LocalParameter
value: 0.0

030047
type: LocalParameter
units: 333928
value: 1.77E-4

030046
type: LocalParameter
value: 0.0

030044
type: LocalParameter
units: 333928
value: 999999.0

030043
type: LocalParameter
units: 333928
value: 0.0

023275
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_2_methyl_butanoic_acid_

023963
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Deoxycytidine_

024167
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_sn_Glycero_3_phospho_1_inositol_

025905
type: Reaction
reversible: false
product: 360230
notes: GENE_ASSOCIATION: lp_3298 PROTEIN_ASSOCIATION: FolK SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.6.3
kinetic law: 360242
fast: false
product: 360218
name: R_2_amino_4_hydroxy_6_hydroxymethyldihydropteridine_diphosphokinase
reactant: 360182
product: 360206
reactant: 360194

360230
type: SpeciesReference
stoichiometry: 1.0
species: 024329

029075
type: LocalParameter
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029073
type: LocalParameter
units: 333928
value: 0.0

029072
type: LocalParameter
value: 0.0

029071
type: LocalParameter
units: 333928
value: 999999.0

029070
type: LocalParameter
units: 333928
value: 0.0

360218
type: SpeciesReference
stoichiometry: 1.0
species: 023771

360182
type: SpeciesReference
stoichiometry: 1.0
species: 023224

023224
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_2_Amino_4_hydroxy_6_hydroxymethyl_7_8_dihydropteridine_

360206
type: SpeciesReference
stoichiometry: 1.0
species: 023221

023221
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_2_Amino_4_hydroxy_6_hydroxymethyl_7_8_dihydropteridine_diphosphate_

360194
type: SpeciesReference
stoichiometry: 1.0
species: 023825

026009
type: Reaction
reversible: false
reactant: 362449
name: R_L_leucine_transport_via_ABC_system
reactant: 362461
product: 362509
product: 362485
product: 362521
reactant: 362473
kinetic law: 362533
fast: false
notes: GENE_ASSOCIATION: ( lp_2981 and lp_2982 and lp_2983 and lp_2984 and lp_2985 ) PROTEIN_ASSOCIATION: LivABCDE SUBSYSTEM: S_Transport__Extracellular PROTEIN_CLASS:
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362449
type: SpeciesReference
stoichiometry: 1.0
species: 023825

362461
type: SpeciesReference
stoichiometry: 1.0
species: 024320

362509
type: SpeciesReference
stoichiometry: 1.0
species: 024458

362485
type: SpeciesReference
stoichiometry: 1.0
species: 023717

362521
type: SpeciesReference
stoichiometry: 1.0
species: 024713

362473
type: SpeciesReference
stoichiometry: 1.0
species: 024461

029270
type: LocalParameter
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029269
type: LocalParameter
units: 333928
value: 0.0

029268
type: LocalParameter
value: 0.0

029267
type: LocalParameter
units: 333928
value: 999999.0

029265
type: LocalParameter
units: 333928
value: 0.0

362497
type: SpeciesReference
stoichiometry: 1.0
species: 024329

025743
type: Reaction
kinetic law: 351138
product: 351126
reactant: 351114
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_D_Sorbitol_exchange

028263
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value: -0.166667

028262
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units: 333928
value: 0.0

028261
type: LocalParameter
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028259
type: LocalParameter
units: 333928
value: 0.0

028258
type: LocalParameter
units: 333928
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351126
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stoichiometry: 1.0
species: 025397

025397
type: Species
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_D_Sorbitol_

351114
type: SpeciesReference
stoichiometry: 1.0
species: 024869

025888
type: Reaction
product: 359207
product: 359231
notes: GENE_ASSOCIATION: lp_2559 PROTEIN_ASSOCIATION: HisD SUBSYSTEM: S_ PROTEIN_CLASS: 1.1.1.23
reactant: 359171
product: 359219
fast: false
reactant: 359183
name: R_histidinol_dehydrogenase
kinetic law: 359243
reactant: 359195
reversible: false

359207
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species: 024329

359231
type: SpeciesReference
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species: 024581

359171
type: SpeciesReference
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species: 024320

359219
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species: 024347

359183
type: SpeciesReference
stoichiometry: 1.0
species: 024362

024362
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Histidinol_

028996
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028995
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units: 333928
value: 0.0

028993
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028992
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028991
type: LocalParameter
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359195
type: SpeciesReference
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species: 024578

024359
type: Species
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Histamine_

025906
type: Reaction
product: 360290
notes: GENE_ASSOCIATION: lp_2537 PROTEIN_ASSOCIATION: MetA SUBSYSTEM: S_ PROTEIN_CLASS: 2.3.1.31
reversible: true
product: 360278
kinetic law: 360303
reactant: 360254
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reactant: 360266
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360290
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species: 023903

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029078
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029077
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029076
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360254
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360266
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026312
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Vitamins__Cofactor_Biosynthesis PROTEIN_CLASS:
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product: 379331
product: 379307
kinetic law: 379356
reactant: 379271
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product: 379319
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reactant: 379283

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379295
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379331
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379307
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030879
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030878
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030876
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030875
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379271
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379319
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379283
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026085
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product: 366846
notes: GENE_ASSOCIATION: lp_0242 PROTEIN_ASSOCIATION: Ynk1 SUBSYSTEM: S_Nucleotide_Salvage_Pathways PROTEIN_CLASS: 2.7.4.6
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366846
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023984
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366809
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366833
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366821
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029684
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029683
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029681
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029680
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023260
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initial amount: NaN
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name: M_L_2_hydroxyisocaproate_

026146
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notes: GENE_ASSOCIATION: lp_0790 PROTEIN_ASSOCIATION: Pgk SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.2.3
kinetic law: 369999
reactant: 369951
product: 369975
reactant: 369963
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reversible: true
product: 369987
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030008
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value: 0.213544

030007
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030005
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030004
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369975
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369963
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369987
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024971
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025999
type: Reaction
fast: false
reversible: true
product: 362112
reactant: 362088
name: R_lactose_transport_inout_via_proton_symport
notes: GENE_ASSOCIATION: ( lp_3468 or lp_3486 ) PROTEIN_ASSOCIATION: ( LacS1 ) or ( LacS2 ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
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reactant: 362100
kinetic law: 362136

362112
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362088
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362124
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362100
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024455
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has only substance units: false
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initial amount: NaN
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029240
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029239
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029238
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029237
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029236
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025031
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_tRNA_Pro__

025621
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product: 346931
product: 346919
kinetic law: 346943
notes: GENE_ASSOCIATION: lp_0498 PROTEIN_ASSOCIATION: Lp_0498 SUBSYSTEM: S_Transport PROTEIN_CLASS:
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reactant: 346895
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346931
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species: 024329

346919
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species: 024035

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027570
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027569
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027568
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027567
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346895
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species: 024038

024038
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boundary condition: false
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initial amount: NaN
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name: M_Deoxyribose_

346907
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species: 024332

023435
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_3_Oxododecanoyl_acyl_carrier_protein_

024770
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has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_Pseudouridine_5__phosphate_

025510
type: Reaction
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fast: false
product: 339759
reactant: 339686
product: 339734
notes: GENE_ASSOCIATION: lp_0775 PROTEIN_ASSOCIATION: ArgG SUBSYSTEM: S_ PROTEIN_CLASS: 6.3.4.5
reactant: 339710
reactant: 339698
name: R_argininosuccinate_synthase
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reversible: false
product: 339722

026931
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026930
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units: 333928
value: 8.84E-4

026929
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026927
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026926
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339759
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339686
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339734
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species: 023795

023795
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initial amount: NaN
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name: M_N_omega___L_Arginino_succinate_

339710
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species: 023888

023888
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boundary condition: false
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initial amount: NaN
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name: M_L_Citrulline_

339698
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species: 023825

339746
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339722
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species: 023771

025732
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kinetic law: 350811
product: 350799
reactant: 350787
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
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028206
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028205
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028203
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028202
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028201
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350799
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stoichiometry: 1.0
species: 025385

350787
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species: 024716

025877
type: Reaction
product: 358618
name: R_hexokinase__D_glucoseATP_
reactant: 358606
reactant: 358594
kinetic law: 358656
product: 358644
fast: false
reversible: false
notes: GENE_ASSOCIATION: lp_1573 PROTEIN_ASSOCIATION: Glk SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.1.2
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358618
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358606
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358594
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species: 023825

028942
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028940
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028939
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028938
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028937
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358644
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358631
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024797
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initial concentration: NaN
initial amount: NaN
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name: M_Pyridoxine_

025733
type: Reaction
kinetic law: 350847
product: 350835
reactant: 350823
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
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028213
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028212
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028211
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028210
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028208
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350835
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species: 025386

025386
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boundary condition: true
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initial concentration: NaN
initial amount: NaN
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name: M__R__Pantothenate_

350823
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species: 024722

024722
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025900
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reactant: 359906
reactant: 359881
product: 359918
product: 359930
reactant: 359893
notes: GENE_ASSOCIATION: lp_1674 PROTEIN_ASSOCIATION: FabG1 SUBSYSTEM: S_ PROTEIN_CLASS: 1.1.1.100
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kinetic law: 359942
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359906
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species: 024587

359881
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species: 023450

359918
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023393
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initial concentration: NaN
initial amount: NaN
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name: M__3R__3_Hydroxyoctadecanoyl_acyl_carrier_protein_

359930
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species: 024584

359893
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029053
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029052
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029050
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029049
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029047
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024212
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initial amount: NaN
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025591
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product: 345060
fast: false
reversible: false
notes: GENE_ASSOCIATION: lp_0253 PROTEIN_ASSOCIATION: KdgK SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.1.45
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reactant: 345011
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027382
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027381
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027380
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027379
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345060
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345023
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345011
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species: 023248

023248
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initial amount: NaN
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023245
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026241
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product: 375570
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product: 375546
notes: GENE_ASSOCIATION: lp_3556 PROTEIN_ASSOCIATION: AraB SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.1.16
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030510
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030509
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030507
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030506
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030505
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375570
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species: 024821

375521
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375558
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375546
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375534
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024824
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initial amount: NaN
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026242
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notes: GENE_ASSOCIATION: lp_3555 PROTEIN_ASSOCIATION: AraD SUBSYSTEM: S_ PROTEIN_CLASS: 5.1.3.4
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030515
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030514
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030512
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030511
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375606
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species: 025169

375594
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025615
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reactant: 346473
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346485
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023999
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boundary condition: false
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initial amount: NaN
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346473
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346509
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027535
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027534
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027533
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027532
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027530
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kinetic law: 337472
notes: GENE_ASSOCIATION: lp_3270 PROTEIN_ASSOCIATION: PurA SUBSYSTEM: S_ PROTEIN_CLASS: 6.3.4.4
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product: 337448
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026732
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026731
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026730
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023870
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product: 349493
reactant: 349481
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
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027977
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027976
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027974
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027973
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349493
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species: 025331

025331
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initial concentration: NaN
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species: 024314

025692
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product: 349529
reactant: 349517
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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027984
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027983
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027981
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027980
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027979
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024323
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kinetic law: 375183
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
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375158
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375134
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375171
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030470
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030469
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030466
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375146
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species: 024806

024806
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025705
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kinetic law: 349977
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reactant: 349952
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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028058
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028056
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028055
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028054
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349952
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species: 024455

023696
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_O_Acetyl_L_serine_

025013
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_tRNA_His__

025850
type: Reaction
reactant: 357143
product: 357167
product: 357179
notes: GENE_ASSOCIATION: ( lp_2344 or lp_1328 or lp_2582 or lp_1578 ) PROTEIN_ASSOCIATION: P_3.1.4.46 SUBSYSTEM: S_ PROTEIN_CLASS: 3.1.4.46
kinetic law: 357203
reactant: 357155
fast: false
reversible: false
name: R_Glycerophosphodiester_phosphodiesterase__Glycerophosphoinositol_
product: 357191

357143
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stoichiometry: 1.0
species: 024167

357167
type: SpeciesReference
stoichiometry: 1.0
species: 024266

357179
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stoichiometry: 1.0
species: 024329

028821
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value: 0.0

028820
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units: 333928
value: 0.0

028819
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028818
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units: 333928
value: 999999.0

028817
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units: 333928
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357155
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species: 024320

357191
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species: 024422

024422
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_myo_Inositol_

026051
type: Reaction
reactant: 364822
notes: GENE_ASSOCIATION: lp_1374 PROTEIN_ASSOCIATION: MetH SUBSYSTEM: S_ PROTEIN_CLASS: 2.1.1.13
reactant: 364810
product: 364847
fast: false
kinetic law: 364871
product: 364835
name: R_methionine_synthase
product: 364859
reversible: false

364822
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species: 024338

364810
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species: 023537

023537
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_5_Methyltetrahydrofolate_

364847
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species: 024515

029475
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029474
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value: 8.74E-4

029473
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029472
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029471
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364835
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species: 024329

364859
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species: 024944

026056
type: Reaction
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
reactant: 365112
fast: false
name: R_L_methionine_transport_inout_via_proton_symport
kinetic law: 365161
reversible: true
product: 365149
reactant: 365124
product: 365136

365112
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species: 024332

029500
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029499
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units: 333928
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029498
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value: 0.0

029497
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units: 333928
value: 999999.0

029496
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365149
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species: 024515

365124
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species: 024518

024518
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Methionine_

365136
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stoichiometry: 1.0
species: 024329

025163
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Xanthosine_5__phosphate_

026112
type: Reaction
notes: GENE_ASSOCIATION: lp_2698 PROTEIN_ASSOCIATION: PyrF SUBSYSTEM: S_ PROTEIN_CLASS: 4.1.1.23
reactant: 368258
product: 368282
reversible: false
product: 368294
fast: false
reactant: 368270
kinetic law: 368306
name: R_orotidine_5__phosphate_decarboxylase

368258
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stoichiometry: 1.0
species: 024329

368282
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stoichiometry: 1.0
species: 023897

368294
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stoichiometry: 1.0
species: 025121

368270
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species: 024638

024638
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Orotidine_5__phosphate_

029828
type: LocalParameter
value: 0.0

029826
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units: 333928
value: 5.9E-5

029825
type: LocalParameter
value: 0.0

029823
type: LocalParameter
units: 333928
value: 999999.0

029822
type: LocalParameter
units: 333928
value: 0.0

025399
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Serine_

025265
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_CO2_

025843
type: Reaction
reactant: 356671
name: R_GMP_synthase__glutamine_hydrolysing_
product: 356757
product: 356732
reactant: 356659
product: 356744
reactant: 356683
product: 356720
notes: GENE_ASSOCIATION: lp_0914 PROTEIN_ASSOCIATION: GuaA SUBSYSTEM: S_ PROTEIN_CLASS: 6.3.5.2
reactant: 356696
kinetic law: 356769
fast: false
reversible: false
product: 356708

356671
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stoichiometry: 1.0
species: 024221

356757
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stoichiometry: 1.0
species: 024734

356732
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stoichiometry: 1.0
species: 024293

356659
type: SpeciesReference
stoichiometry: 1.0
species: 023825

356744
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stoichiometry: 2.0
species: 024329

356683
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stoichiometry: 1.0
species: 024320

356720
type: SpeciesReference
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species: 024239

356696
type: SpeciesReference
stoichiometry: 1.0
species: 025163

028788
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value: 0.0

028786
type: LocalParameter
units: 333928
value: 4.6E-5

028785
type: LocalParameter
value: 0.0

028784
type: LocalParameter
units: 333928
value: 999999.0

028783
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units: 333928
value: 0.0

356708
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stoichiometry: 1.0
species: 023771

025703
type: Reaction
kinetic law: 349904
product: 349892
reactant: 349880
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_D_lactate_exchange

028046
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value: 1.0

028044
type: LocalParameter
units: 333928
value: 0.092057

028043
type: LocalParameter
value: 0.0

028042
type: LocalParameter
units: 333928
value: 0.092057

028041
type: LocalParameter
units: 333928
value: 0.075319

349892
type: SpeciesReference
stoichiometry: 1.0
species: 025348

349880
type: SpeciesReference
stoichiometry: 1.0
species: 024440

026045
type: Reaction
notes: GENE_ASSOCIATION: lp_2536 PROTEIN_ASSOCIATION: MetY SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.2.99.10
product: 364567
reversible: true
product: 364591
fast: false
reactant: 364543
kinetic law: 364603
product: 364579
reactant: 364555
name: R_O_Acetyl_L_homoserine_acetate_lyase__adding_methanethiol_

364567
type: SpeciesReference
stoichiometry: 1.0
species: 023624

364591
type: SpeciesReference
stoichiometry: 1.0
species: 024338

364543
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stoichiometry: 1.0
species: 023669

029452
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value: 0.0

029451
type: LocalParameter
units: 333928
value: 0.0

029449
type: LocalParameter
value: 0.0

029448
type: LocalParameter
units: 333928
value: 999999.0

029447
type: LocalParameter
units: 333928
value: -999999.0

364579
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stoichiometry: 1.0
species: 024329

364555
type: SpeciesReference
stoichiometry: 1.0
species: 024326

024326
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Hydrogen_sulfide_

023678
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N_Acetyl_D_muramoyl_L_alanine_

025662
type: Reaction
kinetic law: 348526
product: 348514
reactant: 348502
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Biotin_exchange

027807
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value: 0.0

027806
type: LocalParameter
units: 333928
value: 0.0

027805
type: LocalParameter
value: 0.0

027804
type: LocalParameter
units: 333928
value: 0.0

027802
type: LocalParameter
units: 333928
value: -4.55E-4

348514
type: SpeciesReference
stoichiometry: 1.0
species: 025250

025250
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Biotin_

348502
type: SpeciesReference
stoichiometry: 1.0
species: 023837

026347
type: Reaction
product: 381225
reversible: false
reactant: 381200
notes: GENE_ASSOCIATION: lp_2380 PROTEIN_ASSOCIATION: Lp_2380 SUBSYSTEM: S_Cplx_Carb PROTEIN_CLASS: 6.3.2.7
reactant: 381212
product: 381249
name: R_UDP_N_acetylmuramoyl_L_alanyl_D_glutamate_lysine_synthetase__alpha_glutamate_
fast: false
product: 381261
product: 381237
reactant: 381188
kinetic law: 381273

381225
type: SpeciesReference
stoichiometry: 1.0
species: 023717

381200
type: SpeciesReference
stoichiometry: 1.0
species: 024467

381212
type: SpeciesReference
stoichiometry: 1.0
species: 025088

025088
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_UDP_N_acetylmuramoyl_L_alanyl_D_glutamate_

381249
type: SpeciesReference
stoichiometry: 1.0
species: 024713

381261
type: SpeciesReference
stoichiometry: 1.0
species: 025067

025067
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_UDP_N_acetylmuramoyl_L_alanyl_D_glutamyl_L_lysine_

381237
type: SpeciesReference
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species: 024329

381188
type: SpeciesReference
stoichiometry: 1.0
species: 023825

031059
type: LocalParameter
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031058
type: LocalParameter
units: 333928
value: 0.0

031056
type: LocalParameter
value: 0.0

031055
type: LocalParameter
units: 333928
value: 999999.0

031054
type: LocalParameter
units: 333928
value: 0.0

025551
type: Reaction
kinetic law: 342400
product: 342388
reactant: 342376
notes: GENE_ASSOCIATION: lp_1085 PROTEIN_ASSOCIATION: AroA1 SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 5.4.99.5
fast: false
reversible: false
name: R_chorismate_mutase

027158
type: LocalParameter
value: 0.0

027156
type: LocalParameter
units: 333928
value: 0.0

027155
type: LocalParameter
value: 0.0

027154
type: LocalParameter
units: 333928
value: 999999.0

027153
type: LocalParameter
units: 333928
value: 0.0

342388
type: SpeciesReference
stoichiometry: 1.0
species: 024731

342376
type: SpeciesReference
stoichiometry: 1.0
species: 023879

026340
type: Reaction
product: 380695
reactant: 380647
name: R_tryptophan_synthase__indoleglycerol_phosphate_
product: 380683
reactant: 380659
kinetic law: 380707
notes: GENE_ASSOCIATION: ( lp_1657 or lp_1658 ) PROTEIN_ASSOCIATION: TrpAB SUBSYSTEM: S_ PROTEIN_CLASS: 4.2.1.20
product: 380671
reversible: false
fast: false

380695
type: SpeciesReference
stoichiometry: 1.0
species: 025049

025049
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Tryptophan_

380647
type: SpeciesReference
stoichiometry: 1.0
species: 023405

023405
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_C___3_Indolyl__glycerol_3_phosphate_

380683
type: SpeciesReference
stoichiometry: 1.0
species: 024320

380659
type: SpeciesReference
stoichiometry: 1.0
species: 024878

031014
type: LocalParameter
value: -2.966667

031012
type: LocalParameter
units: 333928
value: 0.0

031011
type: LocalParameter
value: 0.0

031009
type: LocalParameter
units: 333928
value: 999999.0

031008
type: LocalParameter
units: 333928
value: 0.0

380671
type: SpeciesReference
stoichiometry: 1.0
species: 024155

025310
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Glutamine_

025435
type: Reaction
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
reactant: 334971
kinetic law: 335020
fast: false
product: 335008
reactant: 334983
product: 334996
name: R_3_methyl_2_oxobutanoate_decarboxylase
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334971
type: SpeciesReference
stoichiometry: 1.0
species: 023426

023426
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3_Methyl_2_oxobutanoate_

026491
type: LocalParameter
value: 0.0

026490
type: LocalParameter
units: 333928
value: 3.93E-4

026489
type: LocalParameter
value: 0.0

026488
type: LocalParameter
units: 333928
value: 999999.0

026487
type: LocalParameter
units: 333928
value: 0.0

335008
type: SpeciesReference
stoichiometry: 1.0
species: 023897

334983
type: SpeciesReference
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species: 024329

334996
type: SpeciesReference
stoichiometry: 1.0
species: 023299

026341
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product: 380791
fast: false
notes: GENE_ASSOCIATION: lp_0434 PROTEIN_ASSOCIATION: TrpS SUBSYSTEM: S_ PROTEIN_CLASS: 6.1.1.2
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reactant: 380743
reversible: false
reactant: 380731
kinetic law: 380803
product: 380779
product: 380767
product: 380755
reactant: 380719

380791
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stoichiometry: 1.0
species: 025055

380743
type: SpeciesReference
stoichiometry: 1.0
species: 025049

380731
type: SpeciesReference
stoichiometry: 1.0
species: 025040

025040
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_tRNA_Trp__

031020
type: LocalParameter
value: 0.0

031019
type: LocalParameter
units: 333928
value: 4.0E-6

031017
type: LocalParameter
value: 0.0

031016
type: LocalParameter
units: 333928
value: 999999.0

031015
type: LocalParameter
units: 333928
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380779
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stoichiometry: 1.0
species: 024734

380767
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species: 024329

380755
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species: 023771

380719
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species: 023825

025436
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product: 335056
reactant: 335044
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
kinetic law: 335080
reversible: false
fast: false
product: 335068
name: R_3_methyl_2_oxopentanoate_decarboxylase
reactant: 335032

335056
type: SpeciesReference
stoichiometry: 1.0
species: 023278

335044
type: SpeciesReference
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species: 024329

026497
type: LocalParameter
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026495
type: LocalParameter
units: 333928
value: 8.18E-4

026494
type: LocalParameter
value: 0.0

026493
type: LocalParameter
units: 333928
value: 999999.0

026492
type: LocalParameter
units: 333928
value: 0.0

335068
type: SpeciesReference
stoichiometry: 1.0
species: 023897

335032
type: SpeciesReference
stoichiometry: 1.0
species: 023429

023429
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M__S__3_Methyl_2_oxopentanoate_

025651
type: Reaction
kinetic law: 348117
product: 348105
reactant: 348093
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Acetaldehyde_exchange

027734
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027733
type: LocalParameter
units: 333928
value: 4.94E-4

027731
type: LocalParameter
value: 0.0

027730
type: LocalParameter
units: 333928
value: 4.94E-4

027729
type: LocalParameter
units: 333928
value: 4.04E-4

348105
type: SpeciesReference
stoichiometry: 1.0
species: 025217

025217
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Acetaldehyde_

348093
type: SpeciesReference
stoichiometry: 1.0
species: 023633

026336
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product: 380501
notes: GENE_ASSOCIATION: ( lp_2585 or lp_0761 ) PROTEIN_ASSOCIATION: ( TrxB2 ) or ( TrxB1 ) SUBSYSTEM: S_ PROTEIN_CLASS: 1.8.1.9
kinetic law: 380514
fast: false
reactant: 380477
name: R_thioredoxin_reductase__NADPH_
product: 380489
reactant: 380453
reactant: 380465
reversible: false

380501
type: SpeciesReference
stoichiometry: 1.0
species: 024983

030994
type: LocalParameter
value: 0.0

030993
type: LocalParameter
units: 333928
value: 1.9E-5

030991
type: LocalParameter
value: 0.0

030990
type: LocalParameter
units: 333928
value: 999999.0

030988
type: LocalParameter
units: 333928
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380477
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species: 024980

380489
type: SpeciesReference
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species: 024584

380453
type: SpeciesReference
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380465
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species: 024587

025764
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kinetic law: 351839
product: 351827
reactant: 351815
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Fatty_acid_enoyl_isomerase__FabM_reaction__181_

028384
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value: 0.0

028383
type: LocalParameter
units: 333928
value: 4.7E-5

028382
type: LocalParameter
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028381
type: LocalParameter
units: 333928
value: 999999.0

028379
type: LocalParameter
units: 333928
value: -999999.0

351827
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species: 023236

351815
type: SpeciesReference
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species: 023338

024995
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_tRNA_Arg__

024410
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Imidazole_pyruvate_

025932
type: Reaction
kinetic law: 361726
product: 361714
reactant: 361701
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
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029200
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029199
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units: 333928
value: 1.1E-5

029197
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029196
type: LocalParameter
units: 333928
value: 999999.0

029195
type: LocalParameter
units: 333928
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361714
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stoichiometry: 1.0
species: 024416

024416
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Indolelactate_

361701
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stoichiometry: 1.0
species: 024413

026333
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fast: false
reversible: false
name: R_thiamine_phosphate_diphosphorylase
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notes: GENE_ASSOCIATION: lp_0115 PROTEIN_ASSOCIATION: ThiE SUBSYSTEM: S_ PROTEIN_CLASS: 2.5.1.3
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kinetic law: 380332
reactant: 380296
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380320
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species: 024959

024959
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Thiamin_monophosphate_

380272
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stoichiometry: 1.0
species: 023269

023269
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_2_Methyl_4_amino_5_hydroxymethylpyrimidine_diphosphate_

030974
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value: 0.0

030973
type: LocalParameter
units: 333928
value: 0.0

030971
type: LocalParameter
value: 0.0

030970
type: LocalParameter
units: 333928
value: 999999.0

030968
type: LocalParameter
units: 333928
value: 0.0

380296
type: SpeciesReference
stoichiometry: 1.0
species: 024329

380308
type: SpeciesReference
stoichiometry: 1.0
species: 024734

380284
type: SpeciesReference
stoichiometry: 1.0
species: 023510

025428
type: Reaction
kinetic law: 334609
product: 334597
reactant: 334585
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_2_methylpropanol_transport

026451
type: LocalParameter
value: 0.0

026450
type: LocalParameter
units: 333928
value: 3.93E-4

026449
type: LocalParameter
value: 0.0

026448
type: LocalParameter
units: 333928
value: 999999.0

026447
type: LocalParameter
units: 333928
value: -999999.0

334597
type: SpeciesReference
stoichiometry: 1.0
species: 023308

023308
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_2_methylpropanol_

334585
type: SpeciesReference
stoichiometry: 1.0
species: 023305

023305
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_2_methylpropanol_

024125
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_2__Formamido__N1__5_phospho_D_ribosyl_acetamidine_

024590
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Nicotinamide_

025534
type: Reaction
name: R_ATP_phosphoribosyltransferase
kinetic law: 341392
reactant: 341356
reversible: false
notes: GENE_ASSOCIATION: lp_2560 PROTEIN_ASSOCIATION: HisG SUBSYSTEM: S_ PROTEIN_CLASS: 2.4.2.17
reactant: 341344
product: 341368
product: 341380
fast: false

027073
type: LocalParameter
value: 0.0

027072
type: LocalParameter
units: 333928
value: 0.0

027071
type: LocalParameter
value: 0.0

027070
type: LocalParameter
units: 333928
value: 999999.0

027069
type: LocalParameter
units: 333928
value: 0.0

341356
type: SpeciesReference
stoichiometry: 1.0
species: 024767

341344
type: SpeciesReference
stoichiometry: 1.0
species: 023825

341368
type: SpeciesReference
stoichiometry: 1.0
species: 024734

341380
type: SpeciesReference
stoichiometry: 1.0
species: 024749

026010
type: Reaction
product: 362570
reactant: 362545
product: 362582
reversible: true
fast: false
reactant: 362558
notes: GENE_ASSOCIATION: ( lp_3185 or lp_0399 or lp_2213 or lp_3466 ) PROTEIN_ASSOCIATION: ( Lp_3185 ) or ( BrnQ1 ) or ( BrnQ2 ) or ( BrnQ3 ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
kinetic law: 362594
name: R_L_leucine_transport_inout_via_proton_symport

362570
type: SpeciesReference
stoichiometry: 1.0
species: 024329

362545
type: SpeciesReference
stoichiometry: 1.0
species: 024332

362582
type: SpeciesReference
stoichiometry: 1.0
species: 024458

362558
type: SpeciesReference
stoichiometry: 1.0
species: 024461

029277
type: LocalParameter
value: 0.0

029275
type: LocalParameter
units: 333928
value: 0.001885

029274
type: LocalParameter
value: 0.0

029272
type: LocalParameter
units: 333928
value: 999999.0

029271
type: LocalParameter
units: 333928
value: -999999.0

025919
type: Reaction
name: R_indole_3_glycerol_phosphate_synthase
reversible: false
product: 361024
kinetic law: 361036
product: 361000
reactant: 360988
reactant: 360976
fast: false
product: 361012
notes: GENE_ASSOCIATION: lp_1655 PROTEIN_ASSOCIATION: TrpC SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.1.1.48

361024
type: SpeciesReference
stoichiometry: 1.0
species: 024320

029140
type: LocalParameter
value: 0.0

029138
type: LocalParameter
units: 333928
value: 0.0

029137
type: LocalParameter
value: 0.0

029136
type: LocalParameter
units: 333928
value: 999999.0

029135
type: LocalParameter
units: 333928
value: 0.0

361000
type: SpeciesReference
stoichiometry: 1.0
species: 023405

360988
type: SpeciesReference
stoichiometry: 1.0
species: 024329

360976
type: SpeciesReference
stoichiometry: 1.0
species: 023239

361012
type: SpeciesReference
stoichiometry: 1.0
species: 023897

024512
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Mercaptopyruvate_

025810
type: Reaction
notes: GENE_ASSOCIATION: ( ( lp_2531 and lp_1273 and lp_1274 ) or ( ( lp_3520 and lp_3522 ) and lp_1273 and lp_1274 ) ) PROTEIN_ASSOCIATION: ( EII_acga_glc and Hpr and PtsI ) or ( EII_glc and Hpr and PtsI ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
name: R_D_glucose_transport_via_PEPPyr_PTS
product: 354733
reversible: false
product: 354745
reactant: 354708
fast: false
kinetic law: 354758
reactant: 354720

354733
type: SpeciesReference
stoichiometry: 1.0
species: 024176

354745
type: SpeciesReference
stoichiometry: 1.0
species: 024803

354708
type: SpeciesReference
stoichiometry: 1.0
species: 024677

028639
type: LocalParameter
value: 0.0

028638
type: LocalParameter
units: 333928
value: 0.11336

028637
type: LocalParameter
value: 0.0

028636
type: LocalParameter
units: 333928
value: 999999.0

028635
type: LocalParameter
units: 333928
value: 0.0

354720
type: SpeciesReference
stoichiometry: 1.0
species: 024212

024071
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_dUTP_

025535
type: Reaction
reactant: 341429
fast: false
product: 341453
product: 341465
kinetic law: 341477
reactant: 341417
reactant: 341405
name: R_ATP_synthase__three_protons_for_one_ATP_
reversible: true
notes: GENE_ASSOCIATION: ( lp_2363 and lp_2364 and lp_2365 and lp_2366 and lp_2367 and lp_2368 and lp_2369 and lp_2370 ) PROTEIN_ASSOCIATION: AtpABCDEFGHI SUBSYSTEM: S_ PROTEIN_CLASS: 3.6.3.14
product: 341441

341429
type: SpeciesReference
stoichiometry: 3.0
species: 024332

341453
type: SpeciesReference
stoichiometry: 2.0
species: 024329

341465
type: SpeciesReference
stoichiometry: 1.0
species: 024320

027078
type: LocalParameter
value: 0.0

027077
type: LocalParameter
units: 333928
value: -0.002952

027076
type: LocalParameter
value: 0.0

027075
type: LocalParameter
units: 333928
value: 999999.0

027074
type: LocalParameter
units: 333928
value: -999999.0

341417
type: SpeciesReference
stoichiometry: 1.0
species: 024713

341405
type: SpeciesReference
stoichiometry: 1.0
species: 023717

341441
type: SpeciesReference
stoichiometry: 1.0
species: 023825

025757
type: Reaction
kinetic law: 351538
product: 351526
reactant: 351514
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Tyrosine_exchange

028339
type: LocalParameter
value: 2.366667

028338
type: LocalParameter
units: 333928
value: -0.001096

028336
type: LocalParameter
value: 0.0

028335
type: LocalParameter
units: 333928
value: -0.001096

028334
type: LocalParameter
units: 333928
value: -0.001339

351526
type: SpeciesReference
stoichiometry: 1.0
species: 025413

025413
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Tyrosine_

351514
type: SpeciesReference
stoichiometry: 1.0
species: 025061

025061
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Tyrosine_

026011
type: Reaction
reactant: 362618
product: 362642
kinetic law: 362654
reactant: 362606
reversible: false
fast: false
notes: GENE_ASSOCIATION: lp_0291 PROTEIN_ASSOCIATION: LoxD SUBSYSTEM: S_ PROTEIN_CLASS: 1.13.12.4
product: 362630
name: R_D_lactate_oxidase

362618
type: SpeciesReference
stoichiometry: 1.0
species: 024620

362642
type: SpeciesReference
stoichiometry: 1.0
species: 024803

029284
type: LocalParameter
value: -1.0

029282
type: LocalParameter
units: 333928
value: 0.0

029281
type: LocalParameter
value: 0.0

029279
type: LocalParameter
units: 333928
value: 999999.0

029278
type: LocalParameter
units: 333928
value: 0.0

362606
type: SpeciesReference
stoichiometry: 1.0
species: 024437

024437
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Lactate_

362630
type: SpeciesReference
stoichiometry: 1.0
species: 024317

024317
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Hydrogen_peroxide_

026151
type: Reaction
kinetic law: 370193
product: 370181
reactant: 370169
notes: GENE_ASSOCIATION: lp_0764 PROTEIN_ASSOCIATION: Pgm SUBSYSTEM: S_ PROTEIN_CLASS: 5.4.2.2
fast: false
reversible: true
name: R_phosphoglucomutase

030036
type: LocalParameter
value: 0.0

030034
type: LocalParameter
units: 333928
value: -3.86E-4

030033
type: LocalParameter
value: 0.0

030031
type: LocalParameter
units: 333928
value: 999999.0

030030
type: LocalParameter
units: 333928
value: -999999.0

370181
type: SpeciesReference
stoichiometry: 1.0
species: 024176

370169
type: SpeciesReference
stoichiometry: 1.0
species: 024152

025891
type: Reaction
reactant: 359412
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
reactant: 359424
reversible: false
product: 359436
kinetic law: 359460
product: 359448
name: R_L_histidine_transport_in_via_proton_symport
fast: false

359412
type: SpeciesReference
stoichiometry: 1.0
species: 024332

359424
type: SpeciesReference
stoichiometry: 1.0
species: 024350

359436
type: SpeciesReference
stoichiometry: 1.0
species: 024329

029012
type: LocalParameter
value: 0.0

029011
type: LocalParameter
units: 333928
value: 1.3E-5

029010
type: LocalParameter
value: 0.0

029009
type: LocalParameter
units: 333928
value: 999999.0

029008
type: LocalParameter
units: 333928
value: 0.0

359448
type: SpeciesReference
stoichiometry: 1.0
species: 024347

025518
type: Reaction
product: 340425
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
reactant: 340401
reversible: false
reactant: 340413
product: 340437
fast: false
name: R_L_asparagine_transport_in_via_proton_symport
kinetic law: 340449

340425
type: SpeciesReference
stoichiometry: 1.0
species: 023801

023801
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Asparagine_

340401
type: SpeciesReference
stoichiometry: 1.0
species: 023804

023804
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Asparagine_

340413
type: SpeciesReference
stoichiometry: 1.0
species: 024332

340437
type: SpeciesReference
stoichiometry: 1.0
species: 024329

026979
type: LocalParameter
value: -3.066667

026978
type: LocalParameter
units: 333928
value: 0.0

026977
type: LocalParameter
value: 0.0

026976
type: LocalParameter
units: 333928
value: 999999.0

026975
type: LocalParameter
units: 333928
value: 0.0

025417
type: Reaction
fast: false
reversible: true
product: 334013
name: R_L_2_hydroxyisocaproate_dehydrogenase
kinetic law: 334025
notes: GENE_ASSOCIATION: ( lp_1245 or lp_2349 or lp_0350 ) PROTEIN_ASSOCIATION: ( HicD2 ) or ( HicD3 ) or ( HicD1 ) SUBSYSTEM: S_ PROTEIN_CLASS:
reactant: 333976
reactant: 333988
reactant: 333964
product: 334001

334013
type: SpeciesReference
stoichiometry: 1.0
species: 024578

026387
type: LocalParameter
value: 0.0

026386
type: LocalParameter
units: 333928
value: 0.0

026385
type: LocalParameter
value: 0.0

026384
type: LocalParameter
units: 333928
value: 999999.0

026383
type: LocalParameter
units: 333928
value: -999999.0

333976
type: SpeciesReference
stoichiometry: 1.0
species: 024329

333988
type: SpeciesReference
stoichiometry: 1.0
species: 024581

333964
type: SpeciesReference
stoichiometry: 1.0
species: 023507

334001
type: SpeciesReference
stoichiometry: 1.0
species: 023260

024689
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Phenylalanine_

025359
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Maltose_

025737
type: Reaction
kinetic law: 350955
product: 350943
reactant: 350931
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Pyridoxamine_exchange

028232
type: LocalParameter
value: 2.866667

028231
type: LocalParameter
units: 333928
value: 0.0

028230
type: LocalParameter
value: 0.0

028229
type: LocalParameter
units: 333928
value: 0.0

028227
type: LocalParameter
units: 333928
value: -9.39E-4

350943
type: SpeciesReference
stoichiometry: 1.0
species: 025391

025391
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Pyridoxamine_

350931
type: SpeciesReference
stoichiometry: 1.0
species: 024788

024788
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Pyridoxamine_

024284
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_glycogen_

025997
type: Reaction
kinetic law: 361991
product: 361979
reactant: 361967
notes: GENE_ASSOCIATION: ( lp_0104 and lp_0105 and lp_0106 and lp_0107 and lp_0109 ) PROTEIN_ASSOCIATION: Lar SUBSYSTEM: S_Carbohydrate_Metabolism PROTEIN_CLASS: 5.1.2.1
fast: false
reversible: true
name: R_lactate_racemase

029229
type: LocalParameter
value: 0.0

029228
type: LocalParameter
units: 333928
value: -0.072428

029227
type: LocalParameter
value: 0.0

029226
type: LocalParameter
units: 333928
value: 999999.0

029225
type: LocalParameter
units: 333928
value: -999999.0

361979
type: SpeciesReference
stoichiometry: 1.0
species: 024437

361967
type: SpeciesReference
stoichiometry: 1.0
species: 024443

024443
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Lactate_

026255
type: Reaction
notes: GENE_ASSOCIATION: ( lp_0692 and lp_0693 ) PROTEIN_ASSOCIATION: NrdEF SUBSYSTEM: S_ PROTEIN_CLASS: 1.17.4.1
kinetic law: 376288
fast: false
product: 376276
reactant: 376228
reversible: false
name: R_ribonucleoside_diphosphate_reductase__ADP_
product: 376252
reactant: 376240
product: 376264

030581
type: LocalParameter
value: 0.0

030580
type: LocalParameter
units: 333928
value: 0.0

030579
type: LocalParameter
value: 0.0

030577
type: LocalParameter
units: 333928
value: 999999.0

030576
type: LocalParameter
units: 333928
value: 0.0

376276
type: SpeciesReference
stoichiometry: 1.0
species: 024980

376228
type: SpeciesReference
stoichiometry: 1.0
species: 023717

376252
type: SpeciesReference
stoichiometry: 1.0
species: 023936

376240
type: SpeciesReference
stoichiometry: 1.0
species: 024983

376264
type: SpeciesReference
stoichiometry: 1.0
species: 024320

025874
type: Reaction
reactant: 358388
reversible: false
kinetic law: 358437
fast: false
notes: GENE_ASSOCIATION: lp_1681 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_ PROTEIN_CLASS: 1.3.1.10
product: 358412
reactant: 358376
reactant: 358400
product: 358424
name: R_Hexadecanoyl_acyl_carrier_proteinmalonyl_CoA__C_acyltransferase

358388
type: SpeciesReference
stoichiometry: 1.0
species: 024329

028924
type: LocalParameter
value: 0.0

028923
type: LocalParameter
units: 333928
value: 7.1E-5

028922
type: LocalParameter
value: 0.0

028921
type: LocalParameter
units: 333928
value: 999999.0

028920
type: LocalParameter
units: 333928
value: 0.0

358412
type: SpeciesReference
stoichiometry: 1.0
species: 024341

358376
type: SpeciesReference
stoichiometry: 1.0
species: 023332

358400
type: SpeciesReference
stoichiometry: 1.0
species: 024581

358424
type: SpeciesReference
stoichiometry: 1.0
species: 024578

023822
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Aspartyl_tRNA_Asp__

026139
type: Reaction
kinetic law: 369649
product: 369637
reactant: 369625
notes: GENE_ASSOCIATION: lp_0820 PROTEIN_ASSOCIATION: GlmM SUBSYSTEM: S_ PROTEIN_CLASS: 5.4.2.10
fast: false
reversible: true
name: R_phosphoglucosamine_mutase

029970
type: LocalParameter
value: 0.0

029968
type: LocalParameter
units: 333928
value: -1.39E-4

029967
type: LocalParameter
value: 0.0

029965
type: LocalParameter
units: 333928
value: 999999.0

029964
type: LocalParameter
units: 333928
value: -999999.0

369637
type: SpeciesReference
stoichiometry: 1.0
species: 024194

369625
type: SpeciesReference
stoichiometry: 1.0
species: 024191

024191
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Glucosamine_1_phosphate_

026075
type: Reaction
kinetic law: 366167
product: 366155
reactant: 366142
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: false
name: R_Nicotinic_acid_uptake

029592
type: LocalParameter
value: 0.0

029590
type: LocalParameter
units: 333928
value: 1.0E-6

029589
type: LocalParameter
value: 0.0

029587
type: LocalParameter
units: 333928
value: 999999.0

029586
type: LocalParameter
units: 333928
value: 0.0

366155
type: SpeciesReference
stoichiometry: 1.0
species: 024572

024572
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Nicotinate_

366142
type: SpeciesReference
stoichiometry: 1.0
species: 024575

024575
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Nicotinate_

025730
type: Reaction
kinetic law: 350739
product: 350727
reactant: 350715
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Phenol_exchange

028194
type: LocalParameter
value: 0.0

028193
type: LocalParameter
units: 333928
value: 0.0

028192
type: LocalParameter
value: 0.0

028191
type: LocalParameter
units: 333928
value: 999999.0

028189
type: LocalParameter
units: 333928
value: 0.0

350727
type: SpeciesReference
stoichiometry: 1.0
species: 025383

025383
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Phenol_

350715
type: SpeciesReference
stoichiometry: 1.0
species: 024695

026307
type: Reaction
kinetic law: 379031
product: 379019
product: 379007
reactant: 378995
notes: GENE_ASSOCIATION: lp_1189 PROTEIN_ASSOCIATION: RfbB SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 4.2.1.46
fast: false
reversible: false
name: R_dTDPglucose_4_6_dehydratase

030855
type: LocalParameter
value: 0.0

030853
type: LocalParameter
units: 333928
value: 1.12E-4

030852
type: LocalParameter
value: 0.0

030850
type: LocalParameter
units: 333928
value: 999999.0

030849
type: LocalParameter
units: 333928
value: 0.0

379019
type: SpeciesReference
stoichiometry: 1.0
species: 024320

379007
type: SpeciesReference
stoichiometry: 1.0
species: 024047

024047
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_dTDP_4_dehydro_6_deoxy_D_glucose_

378995
type: SpeciesReference
stoichiometry: 1.0
species: 024053

026077
type: Reaction
name: R_NAD_kinase
product: 366301
reactant: 366251
product: 366276
notes: GENE_ASSOCIATION: lp_2222 PROTEIN_ASSOCIATION: PpnK SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.1.23
kinetic law: 366313
fast: false
reactant: 366264
reversible: false
product: 366288

366301
type: SpeciesReference
stoichiometry: 1.0
species: 024584

366251
type: SpeciesReference
stoichiometry: 1.0
species: 023825

366276
type: SpeciesReference
stoichiometry: 1.0
species: 023717

029632
type: LocalParameter
value: -3.466667

029630
type: LocalParameter
units: 333928
value: 0.0

029629
type: LocalParameter
value: 0.0

029627
type: LocalParameter
units: 333928
value: 999999.0

029626
type: LocalParameter
units: 333928
value: 0.0

366264
type: SpeciesReference
stoichiometry: 1.0
species: 024578

366288
type: SpeciesReference
stoichiometry: 1.0
species: 024329

026300
type: Reaction
reactant: 378670
product: 378694
reactant: 378658
kinetic law: 378706
reversible: true
notes: GENE_ASSOCIATION: lp_3539 PROTEIN_ASSOCIATION: Tal2 SUBSYSTEM: S_Central_Metabolism PROTEIN_CLASS: 2.2.1.2
name: R_transaldolase
product: 378682
fast: false

378670
type: SpeciesReference
stoichiometry: 1.0
species: 024860

024860
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Sedoheptulose_7_phosphate_

378694
type: SpeciesReference
stoichiometry: 1.0
species: 024095

378658
type: SpeciesReference
stoichiometry: 1.0
species: 024155

030816
type: LocalParameter
value: 0.0

030814
type: LocalParameter
units: 333928
value: -0.003461

030813
type: LocalParameter
value: 0.0

030811
type: LocalParameter
units: 333928
value: 999999.0

030810
type: LocalParameter
units: 333928
value: -999999.0

378682
type: SpeciesReference
stoichiometry: 1.0
species: 024077

024164
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Glycerophosphoglycerol_

023374
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3_Dehydroshikimate_

025589
type: Reaction
reactant: 344902
notes: GENE_ASSOCIATION: lp_2050 PROTEIN_ASSOCIATION: CdsA SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.7.41
reversible: true
kinetic law: 344938
product: 344914
reactant: 344890
fast: false
product: 344926
name: R_CDP_Diacylglycerol_synthetase__LPL_specific_
reactant: 344878

344902
type: SpeciesReference
stoichiometry: 0.01
species: 024650

027371
type: LocalParameter
value: 0.0

027370
type: LocalParameter
units: 333928
value: 1.77E-4

027369
type: LocalParameter
value: 0.0

027368
type: LocalParameter
units: 333928
value: 999999.0

027367
type: LocalParameter
units: 333928
value: -999999.0

344914
type: SpeciesReference
stoichiometry: 0.01
species: 023861

023861
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_CDPdiacylglycerol__LPL_specific__

344890
type: SpeciesReference
stoichiometry: 1.0
species: 024329

344926
type: SpeciesReference
stoichiometry: 1.0
species: 024734

344878
type: SpeciesReference
stoichiometry: 1.0
species: 023915

026069
type: Reaction
product: 365877
product: 365865
reactant: 365829
kinetic law: 365889
product: 365853
name: R_molybdopterin_synthase
reactant: 365841
reversible: false
reactant: 365817
notes: GENE_ASSOCIATION: ( lp_1479 and lp_1478 ) PROTEIN_ASSOCIATION: ( MoaD and MoaE ) SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false

365877
type: SpeciesReference
stoichiometry: 3.0
species: 024329

365865
type: SpeciesReference
stoichiometry: 1.0
species: 023588

023588
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_molybdopterin_

365829
type: SpeciesReference
stoichiometry: 1.0
species: 023600

029560
type: LocalParameter
value: 0.0

029559
type: LocalParameter
units: 333928
value: 0.0

029558
type: LocalParameter
value: 0.0

029557
type: LocalParameter
units: 333928
value: 999999.0

029556
type: LocalParameter
units: 333928
value: 0.0

365853
type: SpeciesReference
stoichiometry: 2.0
species: 023579

023579
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_MPT_synthase_small_subunit_MoaD_

365841
type: SpeciesReference
stoichiometry: 1.0
species: 024320

365817
type: SpeciesReference
stoichiometry: 2.0
species: 023582

023582
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_MPT_synthase_sulfurylated_small_subunit__MoaD_SH__

025724
type: Reaction
kinetic law: 350558
product: 350546
reactant: 350534
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_O2_exchange

028163
type: LocalParameter
value: -2.0

028162
type: LocalParameter
units: 333928
value: 0.0

028161
type: LocalParameter
value: 0.0

028159
type: LocalParameter
units: 333928
value: 0.0

028158
type: LocalParameter
units: 333928
value: 0.0

350546
type: SpeciesReference
stoichiometry: 1.0
species: 025375

025375
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_O2_

350534
type: SpeciesReference
stoichiometry: 1.0
species: 024623

026372
type: Reaction
name: R_L_valine_transport_via_ABC_system
product: 382919
reversible: false
product: 382895
product: 382907
reactant: 382883
product: 382931
reactant: 382871
reactant: 382859
kinetic law: 382943
fast: false
notes: GENE_ASSOCIATION: ( lp_2981 and lp_2982 and lp_2983 and lp_2984 and lp_2985 ) PROTEIN_ASSOCIATION: LivABCDE SUBSYSTEM: S_Transport__Extracellular PROTEIN_CLASS:

382919
type: SpeciesReference
stoichiometry: 1.0
species: 024713

382895
type: SpeciesReference
stoichiometry: 1.0
species: 023717

382907
type: SpeciesReference
stoichiometry: 1.0
species: 024329

382883
type: SpeciesReference
stoichiometry: 1.0
species: 025151

382931
type: SpeciesReference
stoichiometry: 1.0
species: 025148

382871
type: SpeciesReference
stoichiometry: 1.0
species: 024320

382859
type: SpeciesReference
stoichiometry: 1.0
species: 023825

031219
type: LocalParameter
value: -0.666667

031218
type: LocalParameter
units: 333928
value: 0.0

031216
type: LocalParameter
value: 0.0

031215
type: LocalParameter
units: 333928
value: 999999.0

031214
type: LocalParameter
units: 333928
value: 0.0

023519
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N___R__4_Phosphopantothenoyl__L_cysteine_

025467
type: Reaction
kinetic law: 336869
product: 336857
reactant: 336845
reactant: 336833
notes: GENE_ASSOCIATION: lp_1058 PROTEIN_ASSOCIATION: Adk SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.4.3
fast: false
reversible: true
name: R_adenylate_kinase

026680
type: LocalParameter
value: 0.0

026679
type: LocalParameter
units: 333928
value: 0.002182

026678
type: LocalParameter
value: 0.0

026677
type: LocalParameter
units: 333928
value: 999999.0

026675
type: LocalParameter
units: 333928
value: -999999.0

336857
type: SpeciesReference
stoichiometry: 2.0
species: 023717

336845
type: SpeciesReference
stoichiometry: 1.0
species: 023825

336833
type: SpeciesReference
stoichiometry: 1.0
species: 023771

025464
type: Reaction
kinetic law: 336688
name: R_4_amino_4_deoxychorismate_synthase
reactant: 336652
reactant: 336639
fast: false
reversible: false
product: 336664
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
product: 336676

026660
type: LocalParameter
value: 0.0

026659
type: LocalParameter
units: 333928
value: 0.0

026658
type: LocalParameter
value: 0.0

026657
type: LocalParameter
units: 333928
value: 999999.0

026656
type: LocalParameter
units: 333928
value: 0.0

336652
type: SpeciesReference
stoichiometry: 1.0
species: 024221

336639
type: SpeciesReference
stoichiometry: 1.0
species: 023879

336664
type: SpeciesReference
stoichiometry: 1.0
species: 023477

023477
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_4_amino_4_deoxychorismate_

336676
type: SpeciesReference
stoichiometry: 1.0
species: 024239

025796
type: Reaction
notes: GENE_ASSOCIATION: ( ( ( lp_3599 and lp_3600 and lp_3601 ) or ( lp_3546 and lp_3547 and lp_3548 ) ) and lp_1273 and lp_1274 ) PROTEIN_ASSOCIATION: ( EII_galt and Hpr and PtsI ) SUBSYSTEM: S_Transport__Extracellular PROTEIN_CLASS:
product: 353810
fast: false
reversible: false
reactant: 353796
kinetic law: 353836
name: R_Galactitol_transport_via_PEPPyr_PTS
reactant: 353783
product: 353823

353810
type: SpeciesReference
stoichiometry: 1.0
species: 024185

353796
type: SpeciesReference
stoichiometry: 1.0
species: 024188

028572
type: LocalParameter
value: -1.333333

028571
type: LocalParameter
units: 333928
value: 0.0

028570
type: LocalParameter
value: 0.0

028569
type: LocalParameter
units: 333928
value: 999999.0

028568
type: LocalParameter
units: 333928
value: 0.0

353783
type: SpeciesReference
stoichiometry: 1.0
species: 024677

353823
type: SpeciesReference
stoichiometry: 1.0
species: 024803

025683
type: Reaction
kinetic law: 349215
product: 349203
reactant: 349191
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_D_Gluconate_exchange

027927
type: LocalParameter
value: 0.0

027926
type: LocalParameter
units: 333928
value: 0.0

027924
type: LocalParameter
value: 0.0

027923
type: LocalParameter
units: 333928
value: 999999.0

027922
type: LocalParameter
units: 333928
value: 0.0

349203
type: SpeciesReference
stoichiometry: 1.0
species: 025307

025307
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_D_Gluconate_

349191
type: SpeciesReference
stoichiometry: 1.0
species: 024218

025570
type: Reaction
product: 343706
name: R_cystathionine_b_lyase
product: 343718
reactant: 343670
reactant: 343682
reversible: false
product: 343694
fast: false
kinetic law: 343730
notes: GENE_ASSOCIATION: ( lp_0255 or lp_3517 ) PROTEIN_ASSOCIATION: ( MetC1 ) or ( MetC2 ) SUBSYSTEM: S_Methionine_Metabolism PROTEIN_CLASS: 4.4.1.8

343706
type: SpeciesReference
stoichiometry: 1.0
species: 024599

343718
type: SpeciesReference
stoichiometry: 1.0
species: 024803

343670
type: SpeciesReference
stoichiometry: 1.0
species: 023924

343682
type: SpeciesReference
stoichiometry: 1.0
species: 024320

343694
type: SpeciesReference
stoichiometry: 1.0
species: 024338

027268
type: LocalParameter
value: 0.0

027267
type: LocalParameter
units: 333928
value: 8.53E-4

027266
type: LocalParameter
value: 0.0

027265
type: LocalParameter
units: 333928
value: 999999.0

027264
type: LocalParameter
units: 333928
value: 0.0

025571
type: Reaction
reversible: false
reactant: 343754
product: 343802
reactant: 343766
notes: GENE_ASSOCIATION: lp_0610 PROTEIN_ASSOCIATION: CysS SUBSYSTEM: S_ PROTEIN_CLASS: 6.1.1.16
product: 343815
reactant: 343742
product: 343778
product: 343790
kinetic law: 343827
name: R_Cysteinyl_tRNA_synthetase
fast: false

343754
type: SpeciesReference
stoichiometry: 1.0
species: 023918

343802
type: SpeciesReference
stoichiometry: 1.0
species: 024329

343766
type: SpeciesReference
stoichiometry: 1.0
species: 025004

025004
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_tRNA_Cys__

343815
type: SpeciesReference
stoichiometry: 1.0
species: 024734

343742
type: SpeciesReference
stoichiometry: 1.0
species: 023825

343778
type: SpeciesReference
stoichiometry: 1.0
species: 023771

343790
type: SpeciesReference
stoichiometry: 1.0
species: 023927

027274
type: LocalParameter
value: 0.0

027273
type: LocalParameter
units: 333928
value: 8.0E-6

027272
type: LocalParameter
value: 0.0

027271
type: LocalParameter
units: 333928
value: 999999.0

027270
type: LocalParameter
units: 333928
value: 0.0

026365
type: Reaction
name: R_uridylate_kinase__dUMP_
reactant: 382437
product: 382449
reactant: 382425
product: 382461
fast: false
kinetic law: 382473
reversible: false
notes: GENE_ASSOCIATION: lp_2053 PROTEIN_ASSOCIATION: PyrH SUBSYSTEM: S_ PROTEIN_CLASS:

382437
type: SpeciesReference
stoichiometry: 1.0
species: 024065

024065
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_dUMP_

382449
type: SpeciesReference
stoichiometry: 1.0
species: 023717

382425
type: SpeciesReference
stoichiometry: 1.0
species: 023825

382461
type: SpeciesReference
stoichiometry: 1.0
species: 024062

024062
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_dUDP_

031180
type: LocalParameter
value: -2.0

031179
type: LocalParameter
units: 333928
value: 0.0

031178
type: LocalParameter
value: 0.0

031176
type: LocalParameter
units: 333928
value: 999999.0

031175
type: LocalParameter
units: 333928
value: 0.0

025070
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Undecaprenyl_diphospho_N_acetylmuramoyl__N_acetylglucosamine__L_alanyl_D_glutamyl_meso_2_6_diaminopimeloyl_D_alanyl_D_lactate_

026221
type: Reaction
notes: GENE_ASSOCIATION: lp_0125 PROTEIN_ASSOCIATION: DeoD SUBSYSTEM: S_Nucleotide_Salvage_Pathways PROTEIN_CLASS: 2.4.2.1
reactant: 374461
kinetic law: 374497
reversible: true
product: 374473
reactant: 374448
fast: false
product: 374485
name: R_purine_nucleoside_phosphorylase__Inosine_

374461
type: SpeciesReference
stoichiometry: 1.0
species: 024713

030407
type: LocalParameter
value: 0.0

030405
type: LocalParameter
units: 333928
value: 0.0

030404
type: LocalParameter
value: 0.0

030402
type: LocalParameter
units: 333928
value: 999999.0

030401
type: LocalParameter
units: 333928
value: -999999.0

374473
type: SpeciesReference
stoichiometry: 1.0
species: 024377

374448
type: SpeciesReference
stoichiometry: 1.0
species: 024425

374485
type: SpeciesReference
stoichiometry: 1.0
species: 024809

025840
type: Reaction
product: 356551
reactant: 356515
reactant: 356527
name: R_glycine_transport_inout_via_proton_symport
kinetic law: 356563
reversible: true
fast: false
product: 356539
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:

356551
type: SpeciesReference
stoichiometry: 1.0
species: 024329

356515
type: SpeciesReference
stoichiometry: 1.0
species: 024254

356527
type: SpeciesReference
stoichiometry: 1.0
species: 024332

028776
type: LocalParameter
value: 0.0

028775
type: LocalParameter
units: 333928
value: 0.001983

028774
type: LocalParameter
value: 0.0

028773
type: LocalParameter
units: 333928
value: 999999.0

028772
type: LocalParameter
units: 333928
value: -999999.0

356539
type: SpeciesReference
stoichiometry: 1.0
species: 024251

026105
type: Reaction
kinetic law: 367907
product: 367870
notes: GENE_ASSOCIATION: ( lp_1497 and lp_1498 and lp_1499 and lp_1500 ) PROTEIN_ASSOCIATION: NarGHIJ SUBSYSTEM: S_ PROTEIN_CLASS: 1.7.1.1
reversible: false
product: 367895
fast: false
reactant: 367833
name: R_nitrate_reductase__NADH_
reactant: 367845
product: 367883
reactant: 367858

029789
type: LocalParameter
value: 0.0

029787
type: LocalParameter
units: 333928
value: 0.0

029786
type: LocalParameter
value: 0.0

029784
type: LocalParameter
units: 333928
value: 999999.0

029783
type: LocalParameter
units: 333928
value: 0.0

367870
type: SpeciesReference
stoichiometry: 1.0
species: 024320

367895
type: SpeciesReference
stoichiometry: 1.0
species: 024608

367833
type: SpeciesReference
stoichiometry: 1.0
species: 024329

367845
type: SpeciesReference
stoichiometry: 1.0
species: 024581

367883
type: SpeciesReference
stoichiometry: 1.0
species: 024578

367858
type: SpeciesReference
stoichiometry: 1.0
species: 024614

025789
type: Reaction
kinetic law: 353408
product: 353396
reactant: 353384
notes: GENE_ASSOCIATION: lp_2502 PROTEIN_ASSOCIATION: Pgi SUBSYSTEM: S_ PROTEIN_CLASS: 5.3.1.9
fast: false
reversible: true
name: R_Glucose_6_phosphate_isomerase

028535
type: LocalParameter
value: 0.0

028534
type: LocalParameter
units: 333928
value: 0.0

028532
type: LocalParameter
value: 0.0

028531
type: LocalParameter
units: 333928
value: 999999.0

028530
type: LocalParameter
units: 333928
value: -999999.0

353396
type: SpeciesReference
stoichiometry: 1.0
species: 024173

353384
type: SpeciesReference
stoichiometry: 1.0
species: 024176

024497
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Mannose_1_phosphate_

025834
type: Reaction
kinetic law: 356237
product: 356224
reactant: 356212
notes: GENE_ASSOCIATION: ( lp_1175 or lp_3436 or lp_3463 or lp_0372 ) PROTEIN_ASSOCIATION: ( GlpF4 ) or ( GlpF5 ) or ( GlpF6 ) or ( GlpF3 ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: false
name: R_glycerol_transport_via_uniport__facilitated_diffusion_

028747
type: LocalParameter
value: 0.0

028746
type: LocalParameter
units: 333928
value: 0.0

028745
type: LocalParameter
value: 0.0

028744
type: LocalParameter
units: 333928
value: 999999.0

028743
type: LocalParameter
units: 333928
value: 0.0

356224
type: SpeciesReference
stoichiometry: 1.0
species: 024272

356212
type: SpeciesReference
stoichiometry: 1.0
species: 024275

024275
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Glycerol_

023347
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3_4_Dihydroxyphenylacetate_

024017
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Diacetyl_

025771
type: Reaction
reversible: true
fast: false
reactant: 352236
product: 352248
kinetic law: 352272
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
name: R_formate_transport_in_via_proton_symport
reactant: 352224
product: 352260

352236
type: SpeciesReference
stoichiometry: 1.0
species: 024332

352248
type: SpeciesReference
stoichiometry: 1.0
species: 024119

028428
type: LocalParameter
value: 0.0

028427
type: LocalParameter
units: 333928
value: -0.053832

028426
type: LocalParameter
value: 0.0

028424
type: LocalParameter
units: 333928
value: 999999.0

028423
type: LocalParameter
units: 333928
value: -999999.0

352224
type: SpeciesReference
stoichiometry: 1.0
species: 024122

024122
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Formate_

352260
type: SpeciesReference
stoichiometry: 1.0
species: 024329

025817
type: Reaction
notes: GENE_ASSOCIATION: ( lp_2498 or lp_2843 or lp_2844 or lp_1312 or lp_1311 or lp_1299 ) PROTEIN_ASSOCIATION: TagE SUBSYSTEM: S_ PROTEIN_CLASS:
product: 355255
name: R_Glucose_lipoteichoic_acid_ligase
reversible: false
reactant: 355219
reactant: 355231
product: 355243
fast: false
product: 355267
kinetic law: 355279

355255
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355219
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species: 023570

023570
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_lipoteichoic_acid__n25__LPL_specific__

355231
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species: 025106

355243
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species: 023576

023576
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Lipoteichoic_acid__n25_with_glucose_residues__LPL_specific__

355267
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species: 025103

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028672
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value: 0.0

028670
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028669
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value: 999999.0

028668
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units: 333928
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025396
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Riboflavin_

026026
type: Reaction
product: 363480
notes: GENE_ASSOCIATION: ( ( lp_0175 and lp_0176 and lp_0177 and lp_0178 ) or lp_0180 ) PROTEIN_ASSOCIATION: ( MalAEFG ) or ( Lp_0180 ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
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product: 363468
name: R_maltose_transport_via_ABC_system
reactant: 363456
kinetic law: 363516
fast: false
product: 363504
product: 363492
reactant: 363432
reactant: 363444

363480
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species: 024329

363468
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species: 023717

363456
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species: 024494

029362
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029360
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value: 0.0

029359
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029357
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units: 333928
value: 999999.0

029356
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units: 333928
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363504
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363492
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363432
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species: 023825

363444
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species: 024320

026287
type: Reaction
name: R_shikimate_kinase
kinetic law: 378006
reversible: false
product: 377970
product: 377982
notes: GENE_ASSOCIATION: lp_2033 PROTEIN_ASSOCIATION: AroI SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.7.1.71
reactant: 377946
product: 377994
fast: false
reactant: 377958

030751
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030749
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value: 0.0

030748
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030746
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units: 333928
value: 999999.0

030745
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units: 333928
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377970
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377982
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species: 024329

377946
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377994
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species: 024887

024887
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Shikimate_5_phosphate_

377958
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species: 024890

025262
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Citrate_

023438
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3_Oxodecanoyl_acyl_carrier_protein_

025924
type: Reaction
reactant: 361304
product: 361328
fast: false
name: R_L_isoleucine_transport_via_ABC_system
product: 361316
notes: GENE_ASSOCIATION: ( lp_2981 and lp_2982 and lp_2983 and lp_2984 and lp_2985 ) PROTEIN_ASSOCIATION: LivABCDE SUBSYSTEM: S_Transport__Extracellular PROTEIN_CLASS:
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reactant: 361292
product: 361353
kinetic law: 361365
reversible: false
reactant: 361280

361304
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species: 024392

361328
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species: 024329

361316
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species: 023717

361340
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species: 024389

361292
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stoichiometry: 1.0
species: 024320

361353
type: SpeciesReference
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species: 024713

029163
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029162
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units: 333928
value: 0.0

029161
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value: 0.0

029160
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units: 333928
value: 999999.0

029159
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units: 333928
value: 0.0

361280
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species: 023825

025544
type: Reaction
product: 341892
reversible: false
reactant: 341832
product: 341880
product: 341868
notes: GENE_ASSOCIATION: ( ( lp_2700 and lp_2701 ) or ( lp_0526 and lp_0527 ) ) PROTEIN_ASSOCIATION: ( PyrAAB ) or ( CarAB ) SUBSYSTEM: S_ PROTEIN_CLASS: 6.3.5.5
name: R_carbamoyl_phosphate_synthase__glutamine_hydrolysing_
reactant: 341844
kinetic law: 341928
reactant: 341856
reactant: 341820
product: 341916
product: 341904
fast: false

341892
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species: 024239

341832
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species: 024221

341880
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species: 023855

023855
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Carbamoyl_phosphate_

341868
type: SpeciesReference
stoichiometry: 2.0
species: 023717

341844
type: SpeciesReference
stoichiometry: 1.0
species: 024320

027118
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value: 0.0

027117
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units: 333928
value: 9.43E-4

027116
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value: 0.0

027114
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units: 333928
value: 999999.0

027113
type: LocalParameter
units: 333928
value: 0.0

341856
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stoichiometry: 1.0
species: 024335

024335
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Bicarbonate_

341820
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species: 023825

341916
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species: 024713

341904
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species: 024329

023723
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_ADPribose_

026331
type: Reaction
product: 380248
reactant: 380224
fast: false
reversible: true
name: R_thiamine_phosphate_kinase
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.4.16
product: 380236
kinetic law: 380260
reactant: 380212

380248
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stoichiometry: 1.0
species: 024962

380224
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species: 024959

380236
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stoichiometry: 1.0
species: 023717

030967
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030966
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units: 333928
value: 0.0

030964
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value: 0.0

030963
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units: 333928
value: 999999.0

030962
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units: 333928
value: -999999.0

380212
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stoichiometry: 1.0
species: 023825

025760
type: Reaction
kinetic law: 351646
product: 351634
reactant: 351622
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Xanthine_exchange

028358
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028357
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units: 333928
value: 0.0

028355
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028354
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units: 333928
value: 999999.0

028353
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units: 333928
value: -0.002909

351634
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stoichiometry: 1.0
species: 025416

025416
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Xanthine_

351622
type: SpeciesReference
stoichiometry: 1.0
species: 025160

025422
type: Reaction
kinetic law: 334282
reactant: 334245
reactant: 334221
fast: false
product: 334270
name: R_2_methylbutanol_dehydrogenase
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
reversible: true
product: 334258
reactant: 334233

026413
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026411
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units: 333928
value: 8.18E-4

026410
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value: 0.0

026409
type: LocalParameter
units: 333928
value: 999999.0

026408
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units: 333928
value: -999999.0

334245
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stoichiometry: 1.0
species: 024581

334221
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stoichiometry: 1.0
species: 023278

334270
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species: 024578

334258
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stoichiometry: 1.0
species: 023284

334233
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stoichiometry: 1.0
species: 024329

023675
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N_Acetyl_D_muramoate_

025492
type: Reaction
reactant: 338602
product: 338626
kinetic law: 338638
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reactant: 338590
name: R_L_alanine_transport_inout_via_proton_symport
reversible: true
product: 338614

338602
type: SpeciesReference
stoichiometry: 1.0
species: 024332

338626
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stoichiometry: 1.0
species: 024329

026830
type: LocalParameter
value: 0.0

026829
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units: 333928
value: 8.35E-4

026828
type: LocalParameter
value: 0.0

026827
type: LocalParameter
units: 333928
value: 999999.0

026826
type: LocalParameter
units: 333928
value: -999999.0

338590
type: SpeciesReference
stoichiometry: 1.0
species: 023756

338614
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species: 023753

025917
type: Reaction
reversible: false
product: 360880
product: 360856
reactant: 360832
kinetic law: 360904
reactant: 360844
product: 360892
notes: GENE_ASSOCIATION: ( lp_2554 and lp_2557 ) PROTEIN_ASSOCIATION: HisHF SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
fast: false
product: 360868
name: R_Imidazole_glycerol_3_phosphate_synthase

360880
type: SpeciesReference
stoichiometry: 1.0
species: 024239

360856
type: SpeciesReference
stoichiometry: 1.0
species: 023735

360832
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stoichiometry: 1.0
species: 024221

029129
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029127
type: LocalParameter
units: 333928
value: 0.0

029126
type: LocalParameter
value: 0.0

029125
type: LocalParameter
units: 333928
value: 999999.0

029124
type: LocalParameter
units: 333928
value: 0.0

360844
type: SpeciesReference
stoichiometry: 1.0
species: 024755

024755
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_5__5_phospho_1_deoxyribulos_1_ylamino_methylideneamino_1__5_phosphoribosyl_imidazole_4_carboxamide_

360892
type: SpeciesReference
stoichiometry: 2.0
species: 024329

360868
type: SpeciesReference
stoichiometry: 1.0
species: 024080

024080
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_erythro_1__Imidazol_4_yl_glycerol_3_phosphate_

025755
type: Reaction
kinetic law: 351465
product: 351452
reactant: 351440
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Trehalose_exchange

028324
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028323
type: LocalParameter
units: 333928
value: 0.0

028321
type: LocalParameter
value: 0.0

028320
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units: 333928
value: 999999.0

028319
type: LocalParameter
units: 333928
value: 0.0

351452
type: SpeciesReference
stoichiometry: 1.0
species: 025410

025410
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Trehalose_

351440
type: SpeciesReference
stoichiometry: 1.0
species: 024989

025530
type: Reaction
reversible: false
notes: GENE_ASSOCIATION: lp_1980 PROTEIN_ASSOCIATION: AspS SUBSYSTEM: S_ PROTEIN_CLASS: 6.1.1.12
product: 341091
product: 341103
fast: false
product: 341127
product: 341115
reactant: 341067
reactant: 341055
reactant: 341079
kinetic law: 341139
name: R_Aspartyl_tRNA_synthetase

341091
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stoichiometry: 1.0
species: 023771

341103
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stoichiometry: 1.0
species: 023822

341127
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species: 024734

341115
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species: 024329

341067
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species: 023825

341055
type: SpeciesReference
stoichiometry: 1.0
species: 023813

341079
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species: 025001

025001
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_tRNA_Asp__

027044
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027043
type: LocalParameter
units: 333928
value: 4.5E-5

027041
type: LocalParameter
value: 0.0

027040
type: LocalParameter
units: 333928
value: 999999.0

027039
type: LocalParameter
units: 333928
value: 0.0

026320
type: Reaction
product: 379777
reactant: 379693
reactant: 379717
reactant: 379705
product: 379753
name: R_thiazole_phosphate_synthesis
kinetic law: 379801
reversible: false
fast: false
product: 379789
product: 379765
product: 379729
product: 379741
notes: GENE_ASSOCIATION: lp_1479 PROTEIN_ASSOCIATION: MoaD SUBSYSTEM: S_ PROTEIN_CLASS:
reactant: 379681

379777
type: SpeciesReference
stoichiometry: 2.0
species: 024320

379693
type: SpeciesReference
stoichiometry: 1.0
species: 024074

024074
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_1_deoxy_D_xylulose_5_phosphate_

379717
type: SpeciesReference
stoichiometry: 1.0
species: 024584

379705
type: SpeciesReference
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species: 024251

379753
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stoichiometry: 1.0
species: 023897

030920
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030919
type: LocalParameter
units: 333928
value: 0.0

030917
type: LocalParameter
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030916
type: LocalParameter
units: 333928
value: 999999.0

030915
type: LocalParameter
units: 333928
value: 0.0

379789
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species: 024587

379765
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species: 024329

379729
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species: 023510

379741
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species: 023579

379681
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species: 023582

025351
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Lactate_

026260
type: Reaction
notes: GENE_ASSOCIATION: ( lp_2673 or lp_2932 ) PROTEIN_ASSOCIATION: ( NrdI ) or ( NrdD ) SUBSYSTEM: S_Nucleotide_Salvage_Pathways PROTEIN_CLASS: 1.17.4.2
name: R_ribonucleoside_triphosphate_reductase__ATP_
reversible: false
product: 376543
kinetic law: 376581
product: 376556
fast: false
reactant: 376531
reactant: 376518
product: 376569

376543
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stoichiometry: 1.0
species: 023945

030607
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value: 0.0

030606
type: LocalParameter
units: 333928
value: 7.0E-6

030604
type: LocalParameter
value: 0.0

030603
type: LocalParameter
units: 333928
value: 999999.0

030602
type: LocalParameter
units: 333928
value: 0.0

376556
type: SpeciesReference
stoichiometry: 1.0
species: 024320

376531
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species: 024983

376518
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species: 023825

376569
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species: 024980

025378
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Orotate_

025637
type: Reaction
kinetic law: 347683
product: 347671
reactant: 347659
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_2_Methylbutanal_exchange

027659
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027658
type: LocalParameter
units: 333928
value: 0.0

027656
type: LocalParameter
value: 0.0

027653
type: LocalParameter
units: 333928
value: 999999.0

027652
type: LocalParameter
units: 333928
value: 0.0

347671
type: SpeciesReference
stoichiometry: 1.0
species: 025181

347659
type: SpeciesReference
stoichiometry: 1.0
species: 023281

025244
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Aspartate_

023807
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_L_Asparaginyl_tRNA_Asn__

026070
type: Reaction
name: R_methylthioadenosine_nucleosidase
product: 365938
notes: GENE_ASSOCIATION: lp_2181 PROTEIN_ASSOCIATION: Mtn SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 3.2.2.16
reactant: 365902
product: 365926
kinetic law: 365950
reversible: false
fast: false
reactant: 365914

365938
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species: 023708

365902
type: SpeciesReference
stoichiometry: 1.0
species: 023534

023534
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_5_Methylthioadenosine_

365926
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species: 023543

029566
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029564
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value: 0.0

029563
type: LocalParameter
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029562
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value: 999999.0

029561
type: LocalParameter
units: 333928
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365914
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species: 024320

023266
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_2_Inosose_

025509
type: Reaction
kinetic law: 339674
product: 339662
product: 339650
reactant: 339638
notes: GENE_ASSOCIATION: lp_0776 PROTEIN_ASSOCIATION: ArgH SUBSYSTEM: S_ PROTEIN_CLASS: 4.3.2.1
fast: false
reversible: true
name: R_argininosuccinate_lyase

026924
type: LocalParameter
value: 0.0

026923
type: LocalParameter
units: 333928
value: 8.84E-4

026922
type: LocalParameter
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026921
type: LocalParameter
units: 333928
value: 999999.0

026920
type: LocalParameter
units: 333928
value: -999999.0

339662
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stoichiometry: 1.0
species: 024146

339650
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stoichiometry: 1.0
species: 023789

339638
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species: 023795

025487
type: Reaction
name: R_D_alanine_D_lactate_ligase__reversible_
fast: false
product: 338301
product: 338289
reactant: 338264
kinetic law: 338313
reversible: true
reactant: 338252
notes: GENE_ASSOCIATION: lp_2345 PROTEIN_ASSOCIATION: DdlA SUBSYSTEM: S_ PROTEIN_CLASS:
product: 338277
reactant: 338240

338301
type: SpeciesReference
stoichiometry: 1.0
species: 024713

338289
type: SpeciesReference
stoichiometry: 1.0
species: 023762

023762
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Alanyl_D_lactate_

338264
type: SpeciesReference
stoichiometry: 1.0
species: 024437

026801
type: LocalParameter
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026800
type: LocalParameter
units: 333928
value: 6.4E-5

026799
type: LocalParameter
value: 0.0

026798
type: LocalParameter
units: 333928
value: 999999.0

026797
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units: 333928
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338252
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species: 023825

338277
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species: 023717

338240
type: SpeciesReference
stoichiometry: 1.0
species: 023750

026137
type: Reaction
reversible: true
fast: false
name: R_Formate_C_acetyltransferase
product: 369601
reactant: 369577
notes: GENE_ASSOCIATION: ( ( lp_3314 and lp_3313 ) or ( lp_2596 and lp_2598 ) ) PROTEIN_ASSOCIATION: ( PflA2 and PflB2 ) or ( PflA1 and PflB1 ) SUBSYSTEM: S_ PROTEIN_CLASS: 2.3.1.54
reactant: 369565
kinetic law: 369613
product: 369589

369601
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stoichiometry: 1.0
species: 024119

369577
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stoichiometry: 1.0
species: 024803

369565
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stoichiometry: 1.0
species: 023903

029963
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value: 0.0

029962
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units: 333928
value: 0.061049

029960
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value: 0.0

029959
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units: 333928
value: 999999.0

029957
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units: 333928
value: -999999.0

369589
type: SpeciesReference
stoichiometry: 1.0
species: 023639

025870
type: Reaction
kinetic law: 358292
product: 358280
product: 358268
reactant: 358256
notes: GENE_ASSOCIATION: ( lp_1677 or lp_1670 ) PROTEIN_ASSOCIATION: ( FabZ2 ) or ( FabZ1 ) SUBSYSTEM: S_ PROTEIN_CLASS: 4.2.1.58
fast: false
reversible: false
name: R__3R__3_Hydroxybutanoyl_acyl_carrier_protein_hydro_lyase

028913
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value: 0.0

028912
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units: 333928
value: 8.3E-5

028910
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value: 0.0

028909
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units: 333928
value: 999999.0

028908
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units: 333928
value: 0.0

358280
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stoichiometry: 1.0
species: 024320

358268
type: SpeciesReference
stoichiometry: 1.0
species: 023329

023329
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_trans_Dec_2_enoyl_acyl_carrier_protein_

358256
type: SpeciesReference
stoichiometry: 1.0
species: 023381

023381
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M__3R__3_Hydroxydecanoyl_acyl_carrier_protein_

026245
type: Reaction
reactant: 375715
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 3.2.1.148
kinetic law: 375751
fast: false
reversible: false
product: 375727
name: R_ribosylhomocysteinase
reactant: 375703
product: 375739

375715
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stoichiometry: 1.0
species: 024827

030530
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value: 0.0

030528
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units: 333928
value: 0.0

030527
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value: 0.0

030525
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units: 333928
value: 0.0

030524
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units: 333928
value: 0.0

375727
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stoichiometry: 1.0
species: 024338

375703
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stoichiometry: 1.0
species: 024320

375739
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species: 024830

025356
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Malate_

026062
type: Reaction
notes: GENE_ASSOCIATION: ( ( ( lp_0230 and lp_0232 ) and lp_1273 and lp_1274 ) or ( lp_1273 and lp_1274 ) ) PROTEIN_ASSOCIATION: ( EII_mnl and Hpr and PtsI ) or ( Hpr and PtsI ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
product: 365475
fast: false
reversible: false
name: R_mannitol_transport_via_PEPPyr_PTS
product: 365487
kinetic law: 365499
reactant: 365463
reactant: 365451

365475
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stoichiometry: 1.0
species: 024548

365487
type: SpeciesReference
stoichiometry: 1.0
species: 024803

029530
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value: -0.666667

029528
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units: 333928
value: 0.0

029527
type: LocalParameter
value: 0.0

029526
type: LocalParameter
units: 333928
value: 999999.0

029525
type: LocalParameter
units: 333928
value: 0.0

365463
type: SpeciesReference
stoichiometry: 1.0
species: 024554

365451
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stoichiometry: 1.0
species: 024677

026067
type: Reaction
kinetic law: 365805
product: 365793
reactant: 365780
notes: GENE_ASSOCIATION: lp_1494 PROTEIN_ASSOCIATION: MoeA SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_molybdenum_cofactor_synthase

029555
type: LocalParameter
value: 0.0

029553
type: LocalParameter
units: 333928
value: 0.0

029552
type: LocalParameter
value: 0.0

029550
type: LocalParameter
units: 333928
value: 999999.0

029549
type: LocalParameter
units: 333928
value: -999999.0

365793
type: SpeciesReference
stoichiometry: 1.0
species: 023591

365780
type: SpeciesReference
stoichiometry: 1.0
species: 023588

023522
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_4_vinyl_p_coumaric_acid_

026370
type: Reaction
fast: false
product: 382738
reversible: true
notes: GENE_ASSOCIATION: lp_2390 PROTEIN_ASSOCIATION: IlvE SUBSYSTEM: S_Valine__leucine__and_isoleucine_metabolism PROTEIN_CLASS: 2.6.1.42
reactant: 382713
reactant: 382701
product: 382725
kinetic law: 382750
name: R_valine_transaminase

382738
type: SpeciesReference
stoichiometry: 1.0
species: 024239

382713
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stoichiometry: 1.0
species: 025148

382701
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stoichiometry: 1.0
species: 023741

382725
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stoichiometry: 1.0
species: 023426

031206
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value: 0.0

031205
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units: 333928
value: 3.93E-4

031203
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value: 0.0

031202
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units: 333928
value: 999999.0

031201
type: LocalParameter
units: 333928
value: -999999.0

023474
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_4_Aminobenzoate_

025849
type: Reaction
fast: false
reactant: 357082
product: 357119
notes: GENE_ASSOCIATION: ( lp_2344 or lp_1328 or lp_2582 or lp_1578 ) PROTEIN_ASSOCIATION: P_3.1.4.46 SUBSYSTEM: S_ PROTEIN_CLASS: 3.1.4.46
product: 357106
reactant: 357070
product: 357094
name: R_Glycerophosphodiester_phosphodiesterase__Glycerophosphoglycerol_
reversible: false
kinetic law: 357131

357082
type: SpeciesReference
stoichiometry: 1.0
species: 024320

357119
type: SpeciesReference
stoichiometry: 1.0
species: 024329

357106
type: SpeciesReference
stoichiometry: 1.0
species: 024266

357070
type: SpeciesReference
stoichiometry: 1.0
species: 024164

357094
type: SpeciesReference
stoichiometry: 1.0
species: 024272

028816
type: LocalParameter
value: 0.0

028814
type: LocalParameter
units: 333928
value: 0.0

028813
type: LocalParameter
value: 0.0

028812
type: LocalParameter
units: 333928
value: 999999.0

028811
type: LocalParameter
units: 333928
value: 0.0

024626
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Oxaloacetate_

025097
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Undecaprenyl_diphosphate_

025709
type: Reaction
kinetic law: 350086
product: 350074
reactant: 350062
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Malate_exchange

028078
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value: -0.166667

028077
type: LocalParameter
units: 333928
value: 0.0

028075
type: LocalParameter
value: 0.0

028074
type: LocalParameter
units: 333928
value: 0.0

028073
type: LocalParameter
units: 333928
value: 0.0

350074
type: SpeciesReference
stoichiometry: 1.0
species: 025356

350062
type: SpeciesReference
stoichiometry: 1.0
species: 024482

024482
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_L_Malate_

025019
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_tRNA_Leu__

025790
type: Reaction
name: R_4_aminobutyrate_transport_inout_via_proton_symport
reactant: 353432
kinetic law: 353468
reactant: 353420
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
reversible: true
fast: false
product: 353456
product: 353444

353432
type: SpeciesReference
stoichiometry: 1.0
species: 024332

028540
type: LocalParameter
value: 0.0

028539
type: LocalParameter
units: 333928
value: -2.75E-4

028538
type: LocalParameter
value: 0.0

028537
type: LocalParameter
units: 333928
value: 999999.0

028536
type: LocalParameter
units: 333928
value: -999999.0

353420
type: SpeciesReference
stoichiometry: 1.0
species: 023468

023468
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_4_Aminobutanoate_

353456
type: SpeciesReference
stoichiometry: 1.0
species: 024329

353444
type: SpeciesReference
stoichiometry: 1.0
species: 023465

025791
type: Reaction
name: R_galactokinase
notes: GENE_ASSOCIATION: lp_3482 PROTEIN_ASSOCIATION: GalK SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.1.6
reversible: false
fast: false
reactant: 353480
kinetic law: 353540
product: 353504
product: 353528
product: 353516
reactant: 353492

353480
type: SpeciesReference
stoichiometry: 1.0
species: 023615

028545
type: LocalParameter
value: 0.0

028544
type: LocalParameter
units: 333928
value: 0.0

028543
type: LocalParameter
value: 0.0

028542
type: LocalParameter
units: 333928
value: 999999.0

028541
type: LocalParameter
units: 333928
value: 0.0

353504
type: SpeciesReference
stoichiometry: 1.0
species: 023717

353528
type: SpeciesReference
stoichiometry: 1.0
species: 024329

353516
type: SpeciesReference
stoichiometry: 1.0
species: 024179

024179
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_alpha_D_Galactose_1_phosphate_

353492
type: SpeciesReference
stoichiometry: 1.0
species: 023825

026181
type: Reaction
reactant: 371617
product: 371653
reversible: false
kinetic law: 371665
name: R_inorganic_diphosphatase
product: 371641
reactant: 371629
fast: false
notes: GENE_ASSOCIATION: lp_1837 PROTEIN_ASSOCIATION: PpaC SUBSYSTEM: S_ PROTEIN_CLASS: 3.6.1.1

371617
type: SpeciesReference
stoichiometry: 1.0
species: 024320

371653
type: SpeciesReference
stoichiometry: 2.0
species: 024713

030192
type: LocalParameter
value: 0.0

030190
type: LocalParameter
units: 333928
value: 0.003153

030189
type: LocalParameter
value: 0.0

030187
type: LocalParameter
units: 333928
value: 999999.0

030186
type: LocalParameter
units: 333928
value: 0.0

371641
type: SpeciesReference
stoichiometry: 1.0
species: 024329

371629
type: SpeciesReference
stoichiometry: 1.0
species: 024734

025454
type: Reaction
kinetic law: 336129
product: 336117
product: 336105
reactant: 336093
notes: GENE_ASSOCIATION: lp_3568 PROTEIN_ASSOCIATION: NanA SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 4.1.3.3
fast: false
reversible: false
name: R_N_Acetylneuraminate_lyase

026606
type: LocalParameter
value: -0.166667

026605
type: LocalParameter
units: 333928
value: 0.0

026604
type: LocalParameter
value: 0.0

026603
type: LocalParameter
units: 333928
value: 999999.0

026601
type: LocalParameter
units: 333928
value: 0.0

336117
type: SpeciesReference
stoichiometry: 1.0
species: 024803

336105
type: SpeciesReference
stoichiometry: 1.0
species: 023681

336093
type: SpeciesReference
stoichiometry: 1.0
species: 023687

023687
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_N_Acetylneuraminate_

023402
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M__3R__3_Hydroxytetradecanoyl_acyl_carrier_protein_

025676
type: Reaction
kinetic law: 348961
product: 348949
reactant: 348937
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Ethanol_exchange

027883
type: LocalParameter
value: 1.0

027882
type: LocalParameter
units: 333928
value: 0.016267

027881
type: LocalParameter
value: 0.0

027879
type: LocalParameter
units: 333928
value: 0.016267

027878
type: LocalParameter
units: 333928
value: 0.01331

348949
type: SpeciesReference
stoichiometry: 1.0
species: 025286

348937
type: SpeciesReference
stoichiometry: 1.0
species: 024089

024089
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Ethanol_

025451
type: Reaction
kinetic law: 336021
notes: GENE_ASSOCIATION: lp_2030 PROTEIN_ASSOCIATION: AlsD SUBSYSTEM: S_ PROTEIN_CLASS: 4.1.1.5
reactant: 335972
name: R_acetolactate_decarboxylase
reactant: 335984
product: 336008
product: 335996
fast: false
reversible: false

026593
type: LocalParameter
value: 0.0

026592
type: LocalParameter
units: 333928
value: 7.08E-4

026591
type: LocalParameter
value: 0.0

026590
type: LocalParameter
units: 333928
value: 999999.0

026588
type: LocalParameter
units: 333928
value: 0.0

335972
type: SpeciesReference
stoichiometry: 1.0
species: 023759

335984
type: SpeciesReference
stoichiometry: 1.0
species: 024329

336008
type: SpeciesReference
stoichiometry: 1.0
species: 023897

335996
type: SpeciesReference
stoichiometry: 1.0
species: 023699

025569
type: Reaction
product: 343646
reactant: 343610
product: 343622
kinetic law: 343658
fast: false
reversible: false
reactant: 343598
product: 343634
name: R_cystathionine_g_lyase
notes: GENE_ASSOCIATION: ( lp_3517 or lp_0255 ) PROTEIN_ASSOCIATION: ( MetC2 ) or ( MetC1 ) SUBSYSTEM: S_ PROTEIN_CLASS: 4.4.1.1

343646
type: SpeciesReference
stoichiometry: 1.0
species: 024599

343610
type: SpeciesReference
stoichiometry: 1.0
species: 024320

343622
type: SpeciesReference
stoichiometry: 1.0
species: 023311

027262
type: LocalParameter
value: -3.833333

027261
type: LocalParameter
units: 333928
value: 0.0

027260
type: LocalParameter
value: 0.0

027259
type: LocalParameter
units: 333928
value: 999999.0

027257
type: LocalParameter
units: 333928
value: 0.0

343598
type: SpeciesReference
stoichiometry: 1.0
species: 023924

343634
type: SpeciesReference
stoichiometry: 1.0
species: 023918

026358
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kinetic law: 382029
product: 382017
reactant: 382005
notes: GENE_ASSOCIATION: ( lp_0709 or lp_1200 or lp_2105 or lp_3481 ) PROTEIN_ASSOCIATION: ( GalE1 ) or ( GalE2 ) or ( GalE3 ) or ( GalE4 ) SUBSYSTEM: S_Lipid__Cell_Wall_Metabolism PROTEIN_CLASS: 5.1.3.2
fast: false
reversible: true
name: R_UDPglucose_4_epimerase

031132
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value: 0.0

031131
type: LocalParameter
units: 333928
value: 5.6E-5

031129
type: LocalParameter
value: 0.0

031128
type: LocalParameter
units: 333928
value: 999999.0

031127
type: LocalParameter
units: 333928
value: -999999.0

382017
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stoichiometry: 1.0
species: 025109

382005
type: SpeciesReference
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species: 025106

024263
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Glycine_betaine_

025562
type: Reaction
notes: GENE_ASSOCIATION: lp_1816 PROTEIN_ASSOCIATION: Lp_1816 SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.7.40
reactant: 343055
product: 343067
product: 343079
reactant: 343043
fast: false
kinetic law: 343091
reversible: false
name: R_CTPD_ribitol_5_phosphate_cytidylyltransferase
reactant: 343030

343055
type: SpeciesReference
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species: 024821

343067
type: SpeciesReference
stoichiometry: 1.0
species: 023867

023867
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_CDPribitol_

343079
type: SpeciesReference
stoichiometry: 1.0
species: 024734

343043
type: SpeciesReference
stoichiometry: 1.0
species: 024329

027221
type: LocalParameter
value: 0.0

027220
type: LocalParameter
units: 333928
value: 1.5E-4

027219
type: LocalParameter
value: 0.0

027218
type: LocalParameter
units: 333928
value: 999999.0

027217
type: LocalParameter
units: 333928
value: 0.0

343030
type: SpeciesReference
stoichiometry: 1.0
species: 023915

026214
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reactant: 374047
product: 374083
name: R_pantetheine_phosphate_adenylyltransferase
product: 374071
notes: GENE_ASSOCIATION: lp_2133 PROTEIN_ASSOCIATION: KdtB SUBSYSTEM: S_Vitamins__Cofactor_Biosynthesis PROTEIN_CLASS: 2.7.7.3
fast: false
kinetic law: 374095
reactant: 374035
reactant: 374059
reversible: true

374047
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stoichiometry: 1.0
species: 024329

374083
type: SpeciesReference
stoichiometry: 1.0
species: 024734

374071
type: SpeciesReference
stoichiometry: 1.0
species: 024032

030367
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030366
type: LocalParameter
units: 333928
value: 0.0

030364
type: LocalParameter
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030363
type: LocalParameter
units: 333928
value: 999999.0

030362
type: LocalParameter
units: 333928
value: -999999.0

374035
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species: 023825

374059
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species: 024659

024659
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Pantetheine_4__phosphate_

023516
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_4__Phosphopantothenate_

025446
type: Reaction
kinetic law: 335707
name: R_UDP_N_acetylglucosamineundecaprenylphosphate_N_acetylglucosamine__1_phosphate_transferase
reversible: false
product: 335695
reactant: 335658
product: 335683
reactant: 335670
notes: GENE_ASSOCIATION: lp_0730 PROTEIN_ASSOCIATION: TagO SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false

026560
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value: 0.0

026559
type: LocalParameter
units: 333928
value: 6.0E-6

026558
type: LocalParameter
value: 0.0

026557
type: LocalParameter
units: 333928
value: 999999.0

026556
type: LocalParameter
units: 333928
value: 0.0

335695
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species: 025127

335658
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species: 025076

335683
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species: 025121

335670
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stoichiometry: 1.0
species: 025100

023203
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M__S__2_5_Amino_1__5_phospho_D_ribosyl_imidazole_4_carboxamidosuccinate_

026352
type: Reaction
reversible: false
product: 381604
reactant: 381552
name: R_UDP_N_acetylmuramoyl_L_alanyl_D_glutamate_synthetase
product: 381578
kinetic law: 381617
fast: false
product: 381565
notes: GENE_ASSOCIATION: lp_2197 PROTEIN_ASSOCIATION: MurD SUBSYSTEM: S_ PROTEIN_CLASS: 6.3.2.9
product: 381591
reactant: 381528
reactant: 381540

381604
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species: 025088

381552
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species: 025085

025085
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_UDP_N_acetylmuramoyl_L_alanine_

381578
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stoichiometry: 1.0
species: 024329

031092
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value: 0.0

031090
type: LocalParameter
units: 333928
value: 6.4E-5

031089
type: LocalParameter
value: 0.0

031088
type: LocalParameter
units: 333928
value: 999999.0

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notes: GENE_ASSOCIATION: lp_0764 PROTEIN_ASSOCIATION: Pgm SUBSYSTEM: S_ PROTEIN_CLASS: 5.4.2.8
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reactant: 373122
reactant: 373134
reactant: 373170
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product: 373399
reactant: 373098
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reactant: 373206
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reactant: 373219
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reactant: 373146
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product: 373291
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reactant: 373050
reactant: 373158
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reactant: 372696
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notes: GENE_ASSOCIATION: ( lp_2724 and lp_2725 and lp_2726 ) PROTEIN_ASSOCIATION: PurLQS SUBSYSTEM: S_ PROTEIN_CLASS: 6.3.5.3
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372782
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026284
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product: 377765
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product: 377753
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025529
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units: 333928
value: 0.0

025750
type: Reaction
kinetic law: 351320
product: 351308
reactant: 351296
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Sucrose_exchange

028299
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028298
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units: 333928
value: 0.0

028296
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value: 0.0

028295
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units: 333928
value: 0.0

028294
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units: 333928
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351308
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species: 025404

025404
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Sucrose_

351296
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species: 024929

025184
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_2_methylbutanol_

026080
type: Reaction
kinetic law: 366556
product: 366544
reactant: 366496
name: R_NAPRTase
notes: GENE_ASSOCIATION: ( lp_2771 or lp_0565 ) PROTEIN_ASSOCIATION: ( NatC2 ) or ( NadC1 ) SUBSYSTEM: S_ PROTEIN_CLASS: 2.4.2.11
reactant: 366520
reversible: false
fast: false
product: 366532
reactant: 366508

029649
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029648
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units: 333928
value: 1.0E-6

029647
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029646
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units: 333928
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029645
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species: 024734

366496
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species: 024329

366520
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366532
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366508
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species: 024572

023933
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Deoxyadenosine_

024116
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Folate_

025885
type: Reaction
product: 359087
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.6.1.38
reversible: true
kinetic law: 359099
product: 359075
reactant: 359063
fast: false
reactant: 359050
name: R_histidine_transaminase

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species: 024410

028982
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028980
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value: 0.0

028979
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028978
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units: 333928
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028977
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species: 024239

359063
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species: 024347

359050
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species: 023741

025903
type: Reaction
product: 360086
kinetic law: 360110
name: R_hydroxyphenylpyruvate_reductase
reactant: 360050
reversible: true
reactant: 360062
fast: false
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.1.1.237
reactant: 360074
product: 360098

360086
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species: 023350

029064
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029063
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value: 0.001075

029062
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029061
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value: 999999.0

029059
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360050
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species: 023356

360062
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species: 024329

360074
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species: 024581

360098
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species: 024578

025741
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kinetic law: 351065
product: 351053
reactant: 351041
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_D_Ribose_exchange

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028249
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units: 333928
value: 0.0

028247
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028246
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units: 333928
value: 999999.0

028245
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units: 333928
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351053
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species: 025395

351041
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species: 024833

024833
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_D_Ribose_

025869
type: Reaction
reactant: 358207
reactant: 358183
product: 358219
product: 358231
kinetic law: 358243
name: R_3R__3_Hydroxydodecanoyl_acyl_carrier_proteinNADP_oxidoreductase
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reversible: false
reactant: 358195
notes: GENE_ASSOCIATION: lp_1674 PROTEIN_ASSOCIATION: FabG1 SUBSYSTEM: S_ PROTEIN_CLASS: 1.1.1.100

358207
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species: 024587

358183
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species: 023435

358219
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species: 023378

023378
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M__R__3_Hydroxydodecanoyl_acyl_carrier_protein_

358231
type: SpeciesReference
stoichiometry: 1.0
species: 024584

028906
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028905
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units: 333928
value: 8.3E-5

028904
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value: 0.0

028903
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units: 333928
value: 999999.0

028902
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units: 333928
value: 0.0

358195
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stoichiometry: 1.0
species: 024329

025516
type: Reaction
kinetic law: 340292
reactant: 340220
product: 340280
name: R_asparagine_synthetase
notes: GENE_ASSOCIATION: lp_0957 PROTEIN_ASSOCIATION: AsnA SUBSYSTEM: S_Alanine_and_aspartate_metabolism PROTEIN_CLASS: 6.3.1.1
reactant: 340208
reactant: 340232
reversible: false
product: 340244
fast: false
product: 340256
product: 340268

026967
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026966
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units: 333928
value: 4.5E-5

026965
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026964
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units: 333928
value: 999999.0

026963
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units: 333928
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340220
type: SpeciesReference
stoichiometry: 1.0
species: 023825

340280
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species: 024734

340208
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species: 023813

340232
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species: 024599

340244
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species: 023771

340256
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species: 023801

340268
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stoichiometry: 1.0
species: 024329

023774
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Anthranilate_

025607
type: Reaction
kinetic law: 346051
product: 346039
product: 346027
reactant: 346015
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: PROTEIN_CLASS:
fast: false
reversible: false
name: R_4_5_dihydroxy_2_3_pentanedione_cyclization__spontaneous_

027490
type: LocalParameter
value: 0.0

027489
type: LocalParameter
units: 333928
value: 1.33E-4

027487
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value: 0.0

027486
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units: 333928
value: 999999.0

027485
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units: 333928
value: 0.0

346039
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stoichiometry: 1.0
species: 024368

024368
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_4_hydroxy_5_methyl_3_2H__furanone_

346027
type: SpeciesReference
stoichiometry: 1.0
species: 024320

346015
type: SpeciesReference
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species: 024011

025478
type: Reaction
product: 337593
product: 337605
kinetic law: 337629
fast: false
product: 337581
notes: GENE_ASSOCIATION: ( ( lp_0714 and lp_0715 and lp_0713 ) or ( lp_0714 and lp_0715 and lp_0712 ) ) PROTEIN_ASSOCIATION: ( PhnC and PhnD and PhnE2 ) or ( PhnC and PhnD and PhnE1 ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
reactant: 337569
reactant: 337545
product: 337617
reactant: 337557
reversible: false
name: R_2_Aminoethyl_phosphonate__AEP__transport_via_ABC_system

337593
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species: 023717

337605
type: SpeciesReference
stoichiometry: 1.0
species: 024329

026746
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026745
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units: 333928
value: 0.0

026744
type: LocalParameter
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026743
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units: 333928
value: 999999.0

026742
type: LocalParameter
units: 333928
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337581
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species: 023212

337569
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species: 023215

023215
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M__2_Aminoethyl_phosphonate_

337545
type: SpeciesReference
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species: 023825

337617
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species: 024713

337557
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species: 024320

025718
type: Reaction
kinetic law: 350375
product: 350363
reactant: 350351
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Sodium_exchange

028131
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028130
type: LocalParameter
units: 333928
value: 0.0

028129
type: LocalParameter
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028127
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units: 333928
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028126
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units: 333928
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350363
type: SpeciesReference
stoichiometry: 1.0
species: 025369

025369
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Sodium_

350351
type: SpeciesReference
stoichiometry: 1.0
species: 024569

025719
type: Reaction
kinetic law: 350412
product: 350400
reactant: 350387
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Nicotinate_exchange

028137
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028136
type: LocalParameter
units: 333928
value: -1.0E-6

028134
type: LocalParameter
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028133
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units: 333928
value: 999999.0

028132
type: LocalParameter
units: 333928
value: -1.91E-4

350400
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stoichiometry: 1.0
species: 025370

025370
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Nicotinate_

350387
type: SpeciesReference
stoichiometry: 1.0
species: 024575

025475
type: Reaction
kinetic law: 337376
product: 337364
product: 337352
reactant: 337340
notes: GENE_ASSOCIATION: lp_3269 PROTEIN_ASSOCIATION: PurB SUBSYSTEM: S_ PROTEIN_CLASS: 4.3.2.2
fast: false
reversible: false
name: R_adenylosuccinate_lyase

026729
type: LocalParameter
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026728
type: LocalParameter
units: 333928
value: 2.2E-4

026727
type: LocalParameter
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026726
type: LocalParameter
units: 333928
value: 999999.0

026724
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units: 333928
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337364
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species: 024146

337352
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species: 023735

337340
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species: 023203

024287
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_glycogen_

026376
type: Reaction
product: 383099
name: R_xanthine_phosphoribosyltransferase
notes: GENE_ASSOCIATION: lp_1139 PROTEIN_ASSOCIATION: Xpt SUBSYSTEM: S_ PROTEIN_CLASS: 2.4.2.22
fast: false
reactant: 383075
reversible: false
kinetic law: 383123
reactant: 383087
product: 383111

383099
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species: 024734

383075
type: SpeciesReference
stoichiometry: 1.0
species: 024767

031239
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031237
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value: 0.0

031236
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031234
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031233
type: LocalParameter
units: 333928
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383087
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species: 025157

383111
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species: 025163

026232
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reactant: 375074
reactant: 375038
name: R_pyruvate_oxidase
kinetic law: 375122
reversible: false
reactant: 375050
reactant: 375062
fast: false
product: 375110
notes: GENE_ASSOCIATION: ( lp_3587 or lp_3589 or lp_2629 or lp_0852 or lp_0849 ) PROTEIN_ASSOCIATION: ( Pox4 ) or ( IlvBN2 ) or ( Pox3 ) or ( Pox2 ) or ( Pox1 ) SUBSYSTEM: S_ PROTEIN_CLASS: 1.2.3.3
product: 375098
product: 375086

375074
type: SpeciesReference
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species: 024803

375038
type: SpeciesReference
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species: 024329

030465
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030464
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value: 0.0

030462
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030461
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030460
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375050
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species: 024620

375062
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375110
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375098
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375086
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species: 023705

024257
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_D_Glyceraldehyde_

026197
type: Reaction
product: 372599
kinetic law: 372611
reactant: 372551
product: 372575
notes: GENE_ASSOCIATION: lp_2727 PROTEIN_ASSOCIATION: PurC SUBSYSTEM: S_ PROTEIN_CLASS: 6.3.2.6
product: 372587
name: R_phosphoribosylaminoimidazolesuccinocarboxamide_synthase
fast: false
reactant: 372539
product: 372563
reactant: 372527
reversible: true

372599
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species: 024713

030276
type: LocalParameter
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030275
type: LocalParameter
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value: 2.2E-4

030273
type: LocalParameter
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030272
type: LocalParameter
units: 333928
value: 999999.0

030270
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372551
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372575
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372587
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372539
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372563
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372527
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species: 023525

026110
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reversible: false
reactant: 368185
notes: GENE_ASSOCIATION: lp_1681 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_ PROTEIN_CLASS: 1.3.1.10
reactant: 368209
kinetic law: 368245
reactant: 368197
fast: false
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product: 368221

368233
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species: 024632

368185
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species: 023341

023341
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_trans_Oct_2_enoyl_acp_

368209
type: SpeciesReference
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species: 024581

029821
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029820
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units: 333928
value: 8.3E-5

029818
type: LocalParameter
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029817
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029816
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368197
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368221
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species: 024578

024419
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Indolepyruvate_

025674
type: Reaction
kinetic law: 348888
product: 348876
reactant: 348864
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Diacetyl_exchange

027870
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027869
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value: 0.0

027867
type: LocalParameter
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027866
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value: 999999.0

027865
type: LocalParameter
units: 333928
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348876
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species: 025280

025280
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Diacetyl_

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species: 024017

025701
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kinetic law: 349832
product: 349820
reactant: 349808
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Indolelactate_exchange

028034
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028033
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value: 1.1E-5

028032
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028030
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028029
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species: 025346

025346
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boundary condition: true
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initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_Indolelactate_

349808
type: SpeciesReference
stoichiometry: 1.0
species: 024416

025782
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fast: false
product: 352999
kinetic law: 353035
name: R_glycerol_3_phosphate_dehydrogenase__NAD_
reversible: true
product: 353011
product: 353023
reactant: 352986
reactant: 352974
notes: GENE_ASSOCIATION: lp_0756 PROTEIN_ASSOCIATION: GpsA SUBSYSTEM: S_ PROTEIN_CLASS: 1.1.1.94

352999
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species: 023993

028497
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028495
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value: -2.25E-4

028494
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028493
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028492
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353023
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352986
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352974
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species: 024266

025828
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reactant: 355897
reactant: 355885
reactant: 355910
product: 355922
notes: GENE_ASSOCIATION: ( ( lp_0367 and lp_0368 ) or ( lp_1607 and lp_1608 and lp_1609 and lp_1610 ) ) PROTEIN_ASSOCIATION: ( ChoQS ) or ( OpuABCD ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
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kinetic law: 355970
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product: 355934
product: 355946

355897
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species: 024320

355885
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355910
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species: 024263

355922
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species: 023717

355958
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species: 024713

028721
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028720
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value: 0.0

028719
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028718
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028717
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355934
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species: 024260

024260
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Glycine_betaine_

355946
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023471
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_4_Aminobenzoate_

025444
type: Reaction
fast: false
product: 335538
reactant: 335526
reversible: false
product: 335574
reactant: 335514
reactant: 335502
notes: GENE_ASSOCIATION: ( ( lp_0592 and ( lp_0362 or lp_0589 ) and lp_0590 and lp_0591 and ( lp_0337 or lp_0854 ) ) or ( lp_1680 and ( lp_1676 or lp_0362 ) and lp_1678 and lp_1679 and ( lp_0337 or lp_0854 ) ) ) PROTEIN_ASSOCIATION: ( AccA1 and AccB1or3 and AccC1 and AccD1 and BirA ) or ( AccA2 and AccB2or3 and AccC2 and AccD2 and BirA ) SUBSYSTEM: S_ PROTEIN_CLASS: 6.4.1.2
product: 335562
name: R_acetyl_CoA_carboxylase
product: 335550
kinetic law: 335586

335538
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species: 023717

335526
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stoichiometry: 1.0
species: 024335

335574
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stoichiometry: 1.0
species: 024713

335514
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species: 023825

335502
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stoichiometry: 1.0
species: 023639

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species: 024488

335550
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species: 024329

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026548
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units: 333928
value: 6.27E-4

026547
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value: 0.0

026546
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units: 333928
value: 999999.0

026544
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units: 333928
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025666
type: Reaction
kinetic law: 348670
product: 348658
reactant: 348646
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Citrate_exchange

027832
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value: 0.0

027831
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units: 333928
value: -0.011963

027830
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value: 0.0

027828
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units: 333928
value: -0.009932

027827
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units: 333928
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348658
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species: 025262

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species: 023885

025304
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_D_Glucose_

025829
type: Reaction
reactant: 355982
notes: GENE_ASSOCIATION: lp_3324 PROTEIN_ASSOCIATION: Lp_3324 SUBSYSTEM: S_Transport PROTEIN_CLASS:
product: 356006
reversible: true
reactant: 355994
fast: false
product: 356018
kinetic law: 356030
name: R_betaine__glycine_betaine__transport_inout_via_proton_symport

355982
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species: 024263

356006
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species: 024260

355994
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species: 024332

356018
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species: 024329

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028725
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028724
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028723
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028722
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units: 333928
value: -999999.0

023843
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Benzaldehyde_

025555
type: Reaction
kinetic law: 342606
product: 342593
product: 342581
reactant: 342569
notes: GENE_ASSOCIATION: lp_3273 PROTEIN_ASSOCIATION: Cls SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Cardiolipin_Synthase__LPL_specific_

027185
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027183
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units: 333928
value: 1.0E-6

027182
type: LocalParameter
value: 0.0

027181
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value: 999999.0

027180
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units: 333928
value: -999999.0

342593
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342581
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species: 023891

023891
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Cardiolipin__LPL_specific__

342569
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species: 024680

025660
type: Reaction
kinetic law: 348454
product: 348442
reactant: 348430
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Aspartate_exchange

027794
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027793
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units: 333928
value: 6.51E-4

027792
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027790
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units: 333928
value: 6.51E-4

027789
type: LocalParameter
units: 333928
value: 5.33E-4

348442
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stoichiometry: 1.0
species: 025244

348430
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stoichiometry: 1.0
species: 023816

023573
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Lipoteichoic_acid__n25__with_100_D_Ala_substitutions__LPL_specific__

026345
type: Reaction
product: 381055
name: R_L_tyrosine_transport_inout_via_proton_symport
reactant: 381043
reactant: 381031
fast: false
product: 381067
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
kinetic law: 381079
reversible: true

381055
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species: 024329

381043
type: SpeciesReference
stoichiometry: 1.0
species: 025061

381031
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species: 024332

381067
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species: 025058

031046
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031045
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value: 0.001096

031043
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031042
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units: 333928
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031041
type: LocalParameter
units: 333928
value: -999999.0

026160
type: Reaction
product: 370591
reversible: true
fast: false
name: R_L_phenylalanine_transport_inout_via_proton_symport
reactant: 370566
kinetic law: 370615
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
reactant: 370578
product: 370603

370591
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species: 024329

370566
type: SpeciesReference
stoichiometry: 1.0
species: 024332

030081
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030080
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units: 333928
value: 8.35E-4

030078
type: LocalParameter
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030077
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units: 333928
value: 999999.0

030076
type: LocalParameter
units: 333928
value: -999999.0

370578
type: SpeciesReference
stoichiometry: 1.0
species: 024689

370603
type: SpeciesReference
stoichiometry: 1.0
species: 024686

025433
type: Reaction
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
fast: false
reactant: 334874
product: 334899
reactant: 334887
kinetic law: 334923
product: 334911
reversible: true
name: R_3_methylbutanol_dehydrogenase
reactant: 334862

334874
type: SpeciesReference
stoichiometry: 1.0
species: 024329

334899
type: SpeciesReference
stoichiometry: 1.0
species: 023420

023420
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3_methylbutanol_

334887
type: SpeciesReference
stoichiometry: 1.0
species: 024581

026479
type: LocalParameter
value: 0.0

026478
type: LocalParameter
units: 333928
value: 0.001827

026477
type: LocalParameter
value: 0.0

026475
type: LocalParameter
units: 333928
value: 999999.0

026474
type: LocalParameter
units: 333928
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334911
type: SpeciesReference
stoichiometry: 1.0
species: 024578

334862
type: SpeciesReference
stoichiometry: 1.0
species: 023414

025927
type: Reaction
name: R_imidazole_lactate_transport__H_symport_
fast: false
reactant: 361449
product: 361473
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
product: 361461
kinetic law: 361485
reactant: 361437
reversible: true

361449
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stoichiometry: 1.0
species: 024401

361473
type: SpeciesReference
stoichiometry: 1.0
species: 024404

361461
type: SpeciesReference
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species: 024332

029175
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029174
type: LocalParameter
units: 333928
value: 0.0

029172
type: LocalParameter
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029171
type: LocalParameter
units: 333928
value: 999999.0

029169
type: LocalParameter
units: 333928
value: -999999.0

361437
type: SpeciesReference
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species: 024329

025928
type: Reaction
reactant: 361521
reactant: 361509
fast: false
reactant: 361497
kinetic law: 361557
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
product: 361545
product: 361533
name: R_imidazole_dehydrogenase
reversible: true

361521
type: SpeciesReference
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species: 024581

361509
type: SpeciesReference
stoichiometry: 1.0
species: 024410

361497
type: SpeciesReference
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species: 024329

029182
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029180
type: LocalParameter
units: 333928
value: 0.0

029179
type: LocalParameter
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029177
type: LocalParameter
units: 333928
value: 999999.0

029176
type: LocalParameter
units: 333928
value: -999999.0

361545
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species: 024578

361533
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species: 024401

023399
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_3_Hydroxypropanal_

025548
type: Reaction
reversible: false
product: 342171
fast: false
product: 342195
product: 342183
name: R_CDP_glycerol_glycerophosphotransferase
reactant: 342159
notes: GENE_ASSOCIATION: ( lp_0268 or lp_0269 ) PROTEIN_ASSOCIATION: ( TagF1 ) or ( TagF2 ) SUBSYSTEM: S_ PROTEIN_CLASS: 2.7.8.12
reactant: 342146
kinetic law: 342207

342171
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species: 023894

342195
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species: 025133

025133
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_Undecaprenyl_diphospho_N_acetylglucosamine_N_acetylmannosamine_glycerolphosphate_

342183
type: SpeciesReference
stoichiometry: 1.0
species: 024329

342159
type: SpeciesReference
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species: 025130

342146
type: SpeciesReference
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species: 023864

027140
type: LocalParameter
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027139
type: LocalParameter
units: 333928
value: 6.0E-6

027138
type: LocalParameter
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027136
type: LocalParameter
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027135
type: LocalParameter
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023501
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_4_Methylthio_2_oxobutanoate_

026164
type: Reaction
reactant: 370736
name: R_Phenylpyruvate_decarboxylase
product: 370760
reversible: false
fast: false
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.1.1.43
kinetic law: 370784
reactant: 370748
product: 370772

370736
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species: 024329

370760
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species: 023897

030101
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030099
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units: 333928
value: 8.1E-4

030098
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030096
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value: 999999.0

030095
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370748
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species: 024710

370772
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species: 024653

023200
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 023193
name: M_2_3_Dihydrodipicolinate_

026165
type: Reaction
reactant: 370808
reactant: 370796
product: 370844
product: 370820
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
fast: false
name: R_phenylpyruvate_oxidation__chemical_
kinetic law: 370856
reversible: false
product: 370832

370808
type: SpeciesReference
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species: 024710

370796
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species: 024620

370844
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370820
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030107
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030106
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030104
type: LocalParameter
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030103
type: LocalParameter
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value: 999999.0

030102
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370832
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species: 024329

026271
type: Reaction
product: 377145
notes: GENE_ASSOCIATION: lp_3545 PROTEIN_ASSOCIATION: GutB SUBSYSTEM: S_ PROTEIN_CLASS: 1.1.1.14
product: 377133
name: R_D_sorbitol_dehydrogenase
kinetic law: 377157
product: 377121
reactant: 377097
reactant: 377109
fast: false
reversible: false

377145
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species: 024581

377133
type: SpeciesReference
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species: 024329

030666
type: LocalParameter
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030664
type: LocalParameter
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value: 0.0

030663
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030661
type: LocalParameter
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030660
type: LocalParameter
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377121
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species: 024134

377097
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species: 024578

377109
type: SpeciesReference
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species: 024866

025426
type: Reaction
reversible: true
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
product: 334475
reactant: 334463
name: R_2_methylpropanoic_acid_transport__H_symport_
fast: false
kinetic law: 334499
product: 334487
reactant: 334451

334475
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species: 023296

334463
type: SpeciesReference
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species: 024329

026441
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026440
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026439
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026438
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026436
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334487
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334451
type: SpeciesReference
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species: 023293

025648
type: Reaction
kinetic law: 348009
product: 347997
reactant: 347985
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_4_Aminobutanoate_exchange

027716
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027715
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units: 333928
value: 2.75E-4

027713
type: LocalParameter
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027712
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027711
type: LocalParameter
units: 333928
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347997
type: SpeciesReference
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species: 025208

025208
type: Species
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initial concentration: NaN
initial amount: NaN
in compartment: 023192
name: M_4_Aminobutanoate_

347985
type: SpeciesReference
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species: 023468

025496
type: Reaction
reactant: 338857
reactant: 338869
kinetic law: 338931
product: 338918
product: 338906
reactant: 338882
reversible: false
name: R_aldehyde_dehydrogenase__acetaldehyde__NAD_
fast: false
product: 338894
notes: GENE_ASSOCIATION: lp_0047 PROTEIN_ASSOCIATION: AldH SUBSYSTEM: S_ PROTEIN_CLASS: 1.2.1.3

338857
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species: 023630

338869
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species: 024320

026854
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026853
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value: 0.0

026852
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026851
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026850
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338918
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338906
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338882
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338894
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species: 023624

025895
type: Reaction
reactant: 359652
product: 359688
reactant: 359640
fast: false
product: 359676
notes: GENE_ASSOCIATION: lp_0114 PROTEIN_ASSOCIATION: ThiD SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.7.1.49
name: R_hydroxymethylpyrimidine_kinase__ATP_
kinetic law: 359700
product: 359664
reversible: false

359652
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359688
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359676
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029030
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029029
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029028
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029027
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029026
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359664
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025922
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reactant: 361135
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notes: GENE_ASSOCIATION: lp_2390 PROTEIN_ASSOCIATION: IlvE SUBSYSTEM: S_Valine__leucine__and_isoleucine_metabolism PROTEIN_CLASS: 2.6.1.42
kinetic law: 361171
name: R_isoleucine_transaminase
reversible: true
product: 361147
reactant: 361122
product: 361159

361135
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029152
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029151
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value: 8.18E-4

029150
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029148
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029147
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361147
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361122
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361159
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species: 024239

026157
type: Reaction
product: 370434
fast: false
name: R_phenylalanine_transaminase
product: 370446
kinetic law: 370458
reactant: 370410
reactant: 370422
reversible: true
notes: GENE_ASSOCIATION: lp_2551 PROTEIN_ASSOCIATION: HisC SUBSYSTEM: S_ PROTEIN_CLASS: 2.6.1.58

370434
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species: 024239

370446
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species: 024710

030068
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030067
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value: 8.1E-4

030065
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030064
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value: 999999.0

030062
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370410
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370422
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025627
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reactant: 347196
reactant: 347208
product: 347220
product: 347245
kinetic law: 347257
fast: false
product: 347232
notes: GENE_ASSOCIATION: lp_0604 PROTEIN_ASSOCIATION: Dut SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 3.6.1.23
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347196
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347208
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347220
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347245
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027601
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027600
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027599
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027598
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027597
type: LocalParameter
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347232
type: SpeciesReference
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species: 024329

025628
type: Reaction
reversible: false
reactant: 347293
fast: false
product: 347305
product: 347317
kinetic law: 347329
reactant: 347269
notes: GENE_ASSOCIATION: lp_2610 PROTEIN_ASSOCIATION: Dxs SUBSYSTEM: S_Vitamins__Cofactor_Biosynthesis PROTEIN_CLASS:
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347269
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347281
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026007
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reactant: 362352
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product: 362425
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029260
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025521
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026315
type: Reaction
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reactant: 379416
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
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379428
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379416
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026001
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product: 362172
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029242
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029241
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024068
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025881
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product: 358892
kinetic law: 358904
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028965
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028964
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026259
type: Reaction
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product: 376494
product: 376470
product: 376482
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kinetic law: 376506
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025480
type: Reaction
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reactant: 337762
product: 337786
product: 337798
notes: GENE_ASSOCIATION: lp_0562 PROTEIN_ASSOCIATION: NagA SUBSYSTEM: S_ PROTEIN_CLASS: 3.5.1.25
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reactant: 337774
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026304
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reactant: 378839
name: R_Tetradecanoyl_acyl_carrier_proteinmalonyl_CoA__C_acyltransferase
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reactant: 378827
kinetic law: 378875
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product: 378851
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378839
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species: 024329

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030832
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030831
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030830
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378863
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026305
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reactant: 378887
notes: GENE_ASSOCIATION: lp_1188 PROTEIN_ASSOCIATION: RfbC SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 5.1.3.13
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030841
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030840
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030839
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030837
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030836
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378899
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024113
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initial amount: NaN
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name: M_Folate_

025614
type: Reaction
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reactant: 346341
reactant: 346365
product: 346389
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
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kinetic law: 346449
product: 346413
reactant: 346328
reactant: 346316
reversible: false
product: 346437
fast: false
name: R_DNA_synthesis__LPL_specific
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346341
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023567
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027528
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027525
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027523
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346437
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346353
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025698
type: Reaction
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product: 349710
reactant: 349698
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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name: M_Hypoxanthine_

349698
type: SpeciesReference
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species: 024380

025716
type: Reaction
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product: 350291
reactant: 350279
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
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028115
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028114
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350291
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350279
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024545
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025503
type: Reaction
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notes: GENE_ASSOCIATION: lp_1654 PROTEIN_ASSOCIATION: TrpD SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.4.2.18
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reactant: 339345
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339357
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026891
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339382
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025587
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notes: GENE_ASSOCIATION: lp_2185 PROTEIN_ASSOCIATION: DapF SUBSYSTEM: S_ PROTEIN_CLASS: 5.1.1.7
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