MODEL1011080003
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species: 144110
reaction: 145564
reaction: 145565
reaction: 145032
reaction: 145077
reaction: 145114
species: 144007
reaction: 145319
reaction: 145018
species: 144141
species: 144688
species: 144670
reaction: 145604
reaction: 145345
species: 144718
species: 144700
species: 144791
species: 143925
reaction: 145133
species: 144303
reaction: 144973
reaction: 145550
reaction: 145544
reaction: 145216
name: Islam2010_Dehalococcoides_Metabolism
reaction: 145056
reaction: 144919
reaction: 145096
reaction: 145384
species: 144238
reaction: 144830
reaction: 145421
reaction: 144883
species: 144372
species: 144111
species: 144167
species: 144696
reaction: 145613
species: 143993
species: 144726
reaction: 144959
reaction: 145621
reaction: 145159
species: 144311
species: 144367
species: 144602
species: 144655
reaction: 144868
reaction: 144854
species: 144757
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reaction: 144893
reaction: 144894
species: 144307
species: 144342
species: 144398
species: 144380
species: 144137
species: 144175
reaction: 145219
species: 144013
species: 144085
species: 144598
species: 144051
species: 144628
species: 144663
species: 143994
reaction: 144848
species: 143997
reaction: 145040
reaction: 145138
species: 144573
species: 144315
species: 144368
species: 144603
species: 144659
species: 144244
reaction: 145121

145525
type: Reaction
product: 292570
product: 292558
fast: false
product: 292594
reactant: 292534
product: 292606
reactant: 292522
notes: GENE_ASSOCIATION: ( 63 and 62 ) PROTEIN_ASSOCIATION: ( PurL and PurQ ) SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 6.3.5.3
reactant: 292510
reactant: 292546
product: 292582
reversible: false
name: R_phosphoribosylformylglycinamidine_synthase

292570
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species: 144271

144271
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2__Formamido__N1__5_phospho_D_ribosyl_acetamidine_C8H14N3O8P

143912
type: Compartment
constant: true
size: NaN
spatial dimensions: 3.0

292558
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species: 144081

144081
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initial concentration: NaN
initial amount: NaN
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name: M_ADP_C10H12N5O10P2

292594
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144334
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_H_H

292534
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144294
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initial concentration: NaN
initial amount: NaN
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name: M_L_Glutamine_C5H10N2O3

292606
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species: 144630

144630
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_Phosphate_HO4P

292522
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species: 144263

144263
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_N2_Formyl_N1__5_phospho_D_ribosyl_glycinamide_C8H13N2O9P

292510
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species: 144126

144126
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_ATP_C10H12N5O13P3

292546
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species: 144330

144330
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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name: M_H2O_H2O

292582
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species: 144300

144300
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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Glutamate_C5H8NO4

144110
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

145564
type: Reaction
name: R_ribonucleoside_triphosphate_reductase__UTP_
product: 294044
reactant: 293994
notes: GENE_ASSOCIATION: ( 52 or 364 ) PROTEIN_ASSOCIATION: NrdD SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 1.17.4.2
product: 294019
fast: false
reversible: false
product: 294031
reactant: 294007

294044
type: SpeciesReference
stoichiometry: 1.0
species: 144712

144712
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Oxidized_thioredoxin_X

293994
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stoichiometry: 1.0
species: 144714

144714
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Reduced_thioredoxin_XH2

294019
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stoichiometry: 1.0
species: 144239

144239
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dUTP_C9H11N2O14P3

294031
type: SpeciesReference
stoichiometry: 1.0
species: 144330

294007
type: SpeciesReference
stoichiometry: 1.0
species: 144771

144771
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_UTP_C9H11N2O15P3

145565
type: Reaction
product: 294068
reactant: 294056
notes: GENE_ASSOCIATION: 158 PROTEIN_ASSOCIATION: SgcE SUBSYSTEM: S_Pentose_Phosphate_Pathway PROTEIN_CLASS: 5.1.3.1
fast: false
reversible: true
name: R_ribulose_5_phosphate_3_epimerase

294068
type: SpeciesReference
stoichiometry: 1.0
species: 144779

144779
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Xylulose_5_phosphate_C5H9O8P

294056
type: SpeciesReference
stoichiometry: 1.0
species: 144673

144673
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Ribulose_5_phosphate_C5H9O8P

145032
type: Reaction
product: 274192
fast: false
notes: GENE_ASSOCIATION: ( 358 or ( 318 or 10 ) ) PROTEIN_ASSOCIATION: ( PyrD ) or ( PyrK ) SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 1.3.99.11
reversible: true
product: 274180
reactant: 274156
product: 274204
reactant: 274168
name: R_dihydroorotate_dehydrogenase

274192
type: SpeciesReference
stoichiometry: 2.0
species: 144334

274180
type: SpeciesReference
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species: 144259

144259
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_ferredoxin__reduced__24Fe_4S_Fe8S8X

274156
type: SpeciesReference
stoichiometry: 1.0
species: 144216

144216
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__S__Dihydroorotate_C5H5N2O4

274204
type: SpeciesReference
stoichiometry: 1.0
species: 144606

144606
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Orotate_C5H3N2O4

274168
type: SpeciesReference
stoichiometry: 2.0
species: 144256

144256
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_ferredoxin__oxidized__24Fe_4S_Fe8S8X

145077
type: Reaction
product: 275517
reactant: 275505
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Ethylene_exchange

275517
type: SpeciesReference
stoichiometry: 1.0
species: 144798

144798
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Ethylene_C2H4

143911
type: Compartment
constant: true
size: NaN
spatial dimensions: 3.0

275505
type: SpeciesReference
stoichiometry: 1.0
species: 144244

144244
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Ethylene_C2H4

145114
type: Reaction
notes: GENE_ASSOCIATION: 339 PROTEIN_ASSOCIATION: FatB SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 3.1.2.14
reversible: true
product: 276173
fast: false
product: 276197
name: R_fatty_acyl_ACP_hydrolase
reactant: 276161
product: 276185
reactant: 276149

276173
type: SpeciesReference
stoichiometry: 1.0
species: 144050

144050
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_acyl_carrier_protein_HX

276197
type: SpeciesReference
stoichiometry: 1.0
species: 144334

276161
type: SpeciesReference
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species: 144330

276185
type: SpeciesReference
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species: 144198

144198
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dodecanoate__C120__C12H23O2

276149
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species: 144196

144196
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Dodecanoyl_ACP__n_C120ACP__C12H23OX

144007
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Oxooctanoyl_acyl_carrier_protein_C8H13O2X

145319
type: Reaction
product: 284425
product: 284413
reactant: 284401
reactant: 284389
notes: GENE_ASSOCIATION: 339 PROTEIN_ASSOCIATION: FabD SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.39
fast: false
reversible: false
name: R_Malonyl_CoAacyl_carrier_protein_S_malonyltransferase

284425
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stoichiometry: 1.0
species: 144403

144403
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Malonyl_acyl_carrier_protein_C3H2O3X

284413
type: SpeciesReference
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species: 144161

144161
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Coenzyme_A_C21H32N7O16P3S

284401
type: SpeciesReference
stoichiometry: 1.0
species: 144406

144406
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Malonyl_CoA_C24H33N7O19P3S

284389
type: SpeciesReference
stoichiometry: 1.0
species: 144050

145018
type: Reaction
product: 273648
product: 273636
reactant: 273624
notes: GENE_ASSOCIATION: 224 PROTEIN_ASSOCIATION: IlvD SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.2.1.9
fast: false
reversible: false
name: R_dihydroxy_acid_dehydratase__2_3_dihydroxy_3_methylpentanoate_

273648
type: SpeciesReference
stoichiometry: 1.0
species: 144330

273636
type: SpeciesReference
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species: 143954

143954
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__R__2_Oxo_3_methylpentanoate_C6H9O3

273624
type: SpeciesReference
stoichiometry: 1.0
species: 143925

143925
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__R__2_3_Dihydroxy_3_methylpentanoate_C6H11O4

144141
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Cardiolipin_C13H16O17P2R4

144688
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Sulfate_O4S

144670
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Ribose_C5H10O5

145604
type: Reaction
fast: false
reactant: 295443
product: 295516
reversible: false
product: 295528
notes: GENE_ASSOCIATION: 417 PROTEIN_ASSOCIATION: IscS SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
product: 295564
reactant: 295480
product: 295504
product: 295576
product: 295540
name: R_thiazole_phosphate_synthesis
reactant: 295468
product: 295492
reactant: 295455
product: 295552

295443
type: SpeciesReference
stoichiometry: 1.0
species: 144126

295516
type: SpeciesReference
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species: 144095

144095
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Alanine_C3H7NO2

295528
type: SpeciesReference
stoichiometry: 1.0
species: 144103

144103
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_AMP_C10H12N5O7P

295564
type: SpeciesReference
stoichiometry: 1.0
species: 144330

295480
type: SpeciesReference
stoichiometry: 1.0
species: 144748

144748
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Tyrosine_C9H11NO3

295504
type: SpeciesReference
stoichiometry: 1.0
species: 144027

144027
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_4_Methyl_5__2_phosphoethyl__thiazole_C6H8NO4PS

295576
type: SpeciesReference
stoichiometry: 1.0
species: 144639

144639
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Diphosphate_HO7P2

295540
type: SpeciesReference
stoichiometry: 1.0
species: 144155

144155
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_CO2_CO2

295468
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stoichiometry: 1.0
species: 144240

144240
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_1_deoxy_D_xylulose_5_phosphate_C5H9O7P

295492
type: SpeciesReference
stoichiometry: 1.0
species: 144023

144023
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_4_Hydroxy_benzyl_alcohol_C7H8O2

295455
type: SpeciesReference
stoichiometry: 1.0
species: 144178

144178
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Cysteine_C3H7NO2S

295552
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145345
type: Reaction
product: 285463
product: 285475
reversible: false
reactant: 285426
reactant: 285451
notes: GENE_ASSOCIATION: 115 PROTEIN_ASSOCIATION: MetK SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.5.1.6
name: R_methionine_adenosyltransferase
reactant: 285438
fast: false
product: 285487

285463
type: SpeciesReference
stoichiometry: 1.0
species: 144101

144101
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_S_Adenosyl_L_methionine_C15H23N6O5S

285475
type: SpeciesReference
stoichiometry: 1.0
species: 144630

285426
type: SpeciesReference
stoichiometry: 1.0
species: 144126

285451
type: SpeciesReference
stoichiometry: 1.0
species: 144410

144410
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Methionine_C5H11NO2S

285438
type: SpeciesReference
stoichiometry: 1.0
species: 144330

285487
type: SpeciesReference
stoichiometry: 1.0
species: 144639

144718
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Asp__HOX

144700
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_3_4_5_Tetrahydrodipicolinate_C7H7NO4

144791
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Chloride_Cl

145133
type: Reaction
product: 277030
product: 277018
reactant: 277006
reactant: 276994
notes: GENE_ASSOCIATION: 327 PROTEIN_ASSOCIATION: Fbp SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 3.1.3.11
fast: false
reversible: false
name: R_fructose_bisphosphatase

277030
type: SpeciesReference
stoichiometry: 1.0
species: 144630

277018
type: SpeciesReference
stoichiometry: 1.0
species: 144248

144248
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Fructose_6_phosphate_C6H11O9P

277006
type: SpeciesReference
stoichiometry: 1.0
species: 144330

276994
type: SpeciesReference
stoichiometry: 1.0
species: 144258

144258
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Fructose_1_6_bisphosphate_C6H10O12P2

144303
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Glycine_C2H5NO2

144973
type: Reaction
product: 271704
reactant: 271692
notes: GENE_ASSOCIATION: ( 82 or 142 ) PROTEIN_ASSOCIATION: CorA1 SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_cobalt_transport_inout_via_permease__no_H_

271704
type: SpeciesReference
stoichiometry: 1.0
species: 144163

144163
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Co2_Co

271692
type: SpeciesReference
stoichiometry: 1.0
species: 144162

144162
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Co2_Co

145550
type: Reaction
product: 293499
reversible: false
fast: false
reactant: 293475
product: 293487
product: 293511
reactant: 293463
notes: GENE_ASSOCIATION: 178 PROTEIN_ASSOCIATION: RbsK SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 2.7.1.15
name: R_ribokinase

293499
type: SpeciesReference
stoichiometry: 1.0
species: 144334

293475
type: SpeciesReference
stoichiometry: 1.0
species: 144670

293487
type: SpeciesReference
stoichiometry: 1.0
species: 144081

293511
type: SpeciesReference
stoichiometry: 1.0
species: 144667

144667
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_alpha_D_Ribose_5_phosphate_C5H9O8P

293463
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145544
type: Reaction
product: 293294
fast: false
reactant: 293245
product: 293269
reactant: 293257
reversible: false
name: R_quinolinate_synthase
product: 293282
notes: GENE_ASSOCIATION: 399 PROTEIN_ASSOCIATION: NadA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:

293294
type: SpeciesReference
stoichiometry: 1.0
species: 144666

144666
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Quinolinate_C7H3NO4

293245
type: SpeciesReference
stoichiometry: 1.0
species: 144210

144210
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Dihydroxyacetone_phosphate_C3H5O6P

293269
type: SpeciesReference
stoichiometry: 2.0
species: 144330

293257
type: SpeciesReference
stoichiometry: 1.0
species: 144362

144362
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Iminoaspartate_C4H3NO4

293282
type: SpeciesReference
stoichiometry: 1.0
species: 144630

145216
type: Reaction
product: 280334
product: 280321
reactant: 280309
notes: GENE_ASSOCIATION: 339 PROTEIN_ASSOCIATION: FabZ SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 4.2.1.58
fast: false
reversible: false
name: R__3R__3_Hydroxybutanoyl_acyl_carrier_protein_hydro_lyase

280334
type: SpeciesReference
stoichiometry: 1.0
species: 144330

280321
type: SpeciesReference
stoichiometry: 1.0
species: 143966

143966
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_trans_Dodec_2_enoyl_acyl_carrier_protein_C12H21OX

280309
type: SpeciesReference
stoichiometry: 1.0
species: 143986

143986
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__R__3_Hydroxydodecanoyl_acyl_carrier_protein_C12H23O2X

145056
type: Reaction
reactant: 275095
name: R_1_deoxy_D_xylulose_5_phosphate_synthase
product: 275120
notes: GENE_ASSOCIATION: 195 PROTEIN_ASSOCIATION: Dxs SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
reactant: 275083
fast: false
product: 275108
reactant: 275071
reversible: false

275095
type: SpeciesReference
stoichiometry: 1.0
species: 144664

144664
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Pyruvate_C3H3O3

275120
type: SpeciesReference
stoichiometry: 1.0
species: 144240

275083
type: SpeciesReference
stoichiometry: 1.0
species: 144334

275108
type: SpeciesReference
stoichiometry: 1.0
species: 144155

275071
type: SpeciesReference
stoichiometry: 1.0
species: 144279

144279
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Glyceraldehyde_3_phosphate_C3H5O6P

144919
type: Reaction
product: 268946
reactant: 268933
notes: GENE_ASSOCIATION: ( 248 or 437 ) PROTEIN_ASSOCIATION: ( ArsB ) or ( ArsB2 ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: false
name: R_arsenite_transporter_via_uniport

268946
type: SpeciesReference
stoichiometry: 1.0
species: 144119

144119
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_arsenite_AsH3O3

268933
type: SpeciesReference
stoichiometry: 1.0
species: 144118

144118
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_arsenite_AsH3O3

145096
type: Reaction
product: 275832
reactant: 275819
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Molybdate_exchange

275832
type: SpeciesReference
stoichiometry: 1.0
species: 144815

144815
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Molybdate_MoO4

275819
type: SpeciesReference
stoichiometry: 1.0
species: 144561

144561
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Molybdate_MoO4

145384
type: Reaction
name: R_nicotinic_acid_mononucleotide_pyrophosphorylase
notes: GENE_ASSOCIATION: 370 PROTEIN_ASSOCIATION: PncB SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
fast: false
product: 287056
product: 287020
reactant: 286971
reactant: 286996
product: 287032
reactant: 286983
reversible: false
product: 287044
reactant: 287008

287056
type: SpeciesReference
stoichiometry: 1.0
species: 144639

287020
type: SpeciesReference
stoichiometry: 1.0
species: 144081

286971
type: SpeciesReference
stoichiometry: 1.0
species: 144126

286996
type: SpeciesReference
stoichiometry: 1.0
species: 144577

144577
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Nicotinate_C6H4NO2

287032
type: SpeciesReference
stoichiometry: 1.0
species: 144589

144589
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Nicotinate_D_ribonucleotide_C11H12NO9P

286983
type: SpeciesReference
stoichiometry: 1.0
species: 144330

287044
type: SpeciesReference
stoichiometry: 1.0
species: 144630

287008
type: SpeciesReference
stoichiometry: 1.0
species: 144656

144656
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_Phospho_alpha_D_ribose_1_diphosphate_C5H8O14P3

144238
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dUMP_C9H11N2O8P

144830
type: Reaction
product: 265506
product: 265494
reactant: 265482
reactant: 265470
notes: GENE_ASSOCIATION: 274 PROTEIN_ASSOCIATION: FabF SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.38
fast: false
reversible: false
name: R_Acetyl_CoAacyl_carrier_protein_S_acetyltransferase

265506
type: SpeciesReference
stoichiometry: 1.0
species: 144161

265494
type: SpeciesReference
stoichiometry: 1.0
species: 144053

144053
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Acetyl_ACP_C2H3OX

265482
type: SpeciesReference
stoichiometry: 1.0
species: 144058

144058
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Acetyl_CoA_C23H34N7O17P3S

265470
type: SpeciesReference
stoichiometry: 1.0
species: 144050

145421
type: Reaction
reversible: false
product: 288482
notes: GENE_ASSOCIATION: 409 PROTEIN_ASSOCIATION: MazG SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
product: 288470
fast: false
product: 288494
name: R_Nucleoside_triphosphate_pyrophosphorylase__dttp_
reactant: 288458
reactant: 288446

288482
type: SpeciesReference
stoichiometry: 1.0
species: 144334

288470
type: SpeciesReference
stoichiometry: 1.0
species: 144234

144234
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dTMP_C10H13N2O8P

288494
type: SpeciesReference
stoichiometry: 1.0
species: 144639

288458
type: SpeciesReference
stoichiometry: 1.0
species: 144330

288446
type: SpeciesReference
stoichiometry: 1.0
species: 144235

144235
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dTTP_C10H13N2O14P3

144883
type: Reaction
product: 267592
product: 267580
reactant: 267568
reactant: 267556
notes: GENE_ASSOCIATION: 369 PROTEIN_ASSOCIATION: PurH SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.1.2.3
fast: false
reversible: true
name: R_phosphoribosylaminoimidazolecarboxamide_formyltransferase

267592
type: SpeciesReference
stoichiometry: 1.0
species: 144702

144702
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_6_7_8_Tetrahydrofolate_C19H21N7O6

267580
type: SpeciesReference
stoichiometry: 1.0
species: 144272

144272
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_Formamido_1__5_phospho_D_ribosyl_imidazole_4_carboxamide_C10H13N4O9P

267568
type: SpeciesReference
stoichiometry: 1.0
species: 144089

144089
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_Amino_1__5_Phospho_D_ribosyl_imidazole_4_carboxamide_C9H13N4O8P

267556
type: SpeciesReference
stoichiometry: 1.0
species: 143913

143913
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_10_Formyltetrahydrofolate_C20H21N7O7

144372
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_L_Isoleucine_C6H13NO2

144111
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Arginine_C6H15N4O2

144167
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

144696
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Tagatose_1_6_biphosphate_C6H10O12P2

145613
type: Reaction
product: 295885
fast: false
product: 295898
reversible: false
reactant: 295873
notes: GENE_ASSOCIATION: 203 PROTEIN_ASSOCIATION: ThiE SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.3
reactant: 295860
reactant: 295847
name: R_thiamine_phosphate_diphosphorylase

295885
type: SpeciesReference
stoichiometry: 1.0
species: 144639

295898
type: SpeciesReference
stoichiometry: 1.0
species: 144703

144703
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Thiamin_monophosphate_C12H16N4O4PS

295873
type: SpeciesReference
stoichiometry: 1.0
species: 144334

295860
type: SpeciesReference
stoichiometry: 1.0
species: 144027

295847
type: SpeciesReference
stoichiometry: 1.0
species: 143947

143947
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Methyl_4_amino_5_hydroxymethylpyrimidine_diphosphate_C6H8N3O7P2

143993
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__3R__3_Hydroxyoctadecanoyl_acyl_carrier_protein_C18H35O2X

144726
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Ile__HOX

144959
type: Reaction
fast: false
reactant: 271258
product: 271270
product: 271282
product: 271294
notes: GENE_ASSOCIATION: 74 PROTEIN_ASSOCIATION: IspE SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
reactant: 271246
reversible: false
name: R_4__cytidine_5__diphospho__2_C_methyl_D_erythritol_kinase

271258
type: SpeciesReference
stoichiometry: 1.0
species: 144126

271270
type: SpeciesReference
stoichiometry: 1.0
species: 143963

143963
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

271282
type: SpeciesReference
stoichiometry: 1.0
species: 144081

271294
type: SpeciesReference
stoichiometry: 1.0
species: 144334

271246
type: SpeciesReference
stoichiometry: 1.0
species: 144022

144022
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

145621
type: Reaction
notes: GENE_ASSOCIATION: 213 PROTEIN_ASSOCIATION: CysAP SUBSYSTEM: S_Transport PROTEIN_CLASS:
reactant: 296151
fast: false
product: 296163
reactant: 296127
reactant: 296139
reversible: false
product: 296175
product: 296199
product: 296188
name: R_thiosulfate_transport_via_ABC_system

296151
type: SpeciesReference
stoichiometry: 1.0
species: 144745

144745
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Thiosulfate_O3S2

296163
type: SpeciesReference
stoichiometry: 1.0
species: 144081

296127
type: SpeciesReference
stoichiometry: 1.0
species: 144126

296139
type: SpeciesReference
stoichiometry: 1.0
species: 144330

296175
type: SpeciesReference
stoichiometry: 1.0
species: 144334

296199
type: SpeciesReference
stoichiometry: 1.0
species: 144744

144744
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Thiosulfate_O3S2

296188
type: SpeciesReference
stoichiometry: 1.0
species: 144630

145159
type: Reaction
fast: false
product: 277972
name: R_glycerol_3_phosphate_dehydrogenase__NADP_
product: 277984
product: 277996
reactant: 277948
notes: GENE_ASSOCIATION: 363 PROTEIN_ASSOCIATION: GpsA SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.1.1.94
reversible: true
reactant: 277960

277972
type: SpeciesReference
stoichiometry: 1.0
species: 144210

277984
type: SpeciesReference
stoichiometry: 1.0
species: 144334

277996
type: SpeciesReference
stoichiometry: 1.0
species: 144581

144581
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

277948
type: SpeciesReference
stoichiometry: 1.0
species: 144308

144308
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_sn_Glycerol_3_phosphate_C3H7O6P

277960
type: SpeciesReference
stoichiometry: 1.0
species: 144580

144580
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

144311
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Glycerol_C3H8O3

144367
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Icosanoate__n_C200__C20H39O2

144602
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

144655
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Prolyl_tRNA_Pro__C5H9NO2X

144868
type: Reaction
product: 267026
name: R_adenosine_kinase
reactant: 266989
product: 267014
notes: GENE_ASSOCIATION: 111 PROTEIN_ASSOCIATION: Adk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.1.20
reactant: 267001
fast: false
product: 267038
reversible: false

267026
type: SpeciesReference
stoichiometry: 1.0
species: 144103

266989
type: SpeciesReference
stoichiometry: 1.0
species: 144078

144078
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Adenosine_C10H13N5O4

267014
type: SpeciesReference
stoichiometry: 1.0
species: 144081

267001
type: SpeciesReference
stoichiometry: 1.0
species: 144126

267038
type: SpeciesReference
stoichiometry: 1.0
species: 144334

144854
type: Reaction
reversible: false
reactant: 266435
reactant: 266448
product: 266474
product: 266461
product: 266487
reactant: 266411
reactant: 266423
name: R_adenosylcobyric_acid_synthase
fast: false
product: 266513
notes: GENE_ASSOCIATION: 260 PROTEIN_ASSOCIATION: CobQ SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
product: 266500

266435
type: SpeciesReference
stoichiometry: 4.0
species: 144294

266448
type: SpeciesReference
stoichiometry: 4.0
species: 144330

266474
type: SpeciesReference
stoichiometry: 4.0
species: 144081

266461
type: SpeciesReference
stoichiometry: 1.0
species: 144074

144074
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_adenosyl_cobyric_acid_C55H76CoN15O11

266487
type: SpeciesReference
stoichiometry: 4.0
species: 144300

266411
type: SpeciesReference
stoichiometry: 1.0
species: 144073

144073
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

266423
type: SpeciesReference
stoichiometry: 4.0
species: 144126

266513
type: SpeciesReference
stoichiometry: 4.0
species: 144630

266500
type: SpeciesReference
stoichiometry: 4.0
species: 144334

144757
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Ubiquinone_8_C49H74O4

144893
type: Reaction
reactant: 267893
reversible: false
reactant: 267905
reactant: 267917
product: 267942
fast: false
product: 267954
product: 267929
name: R_Alanyl_tRNA_synthetase
notes: GENE_ASSOCIATION: 14 PROTEIN_ASSOCIATION: AlaS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.7

267893
type: SpeciesReference
stoichiometry: 1.0
species: 144095

267905
type: SpeciesReference
stoichiometry: 1.0
species: 144126

267917
type: SpeciesReference
stoichiometry: 1.0
species: 144715

144715
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Ala__HOX

267942
type: SpeciesReference
stoichiometry: 1.0
species: 144103

267954
type: SpeciesReference
stoichiometry: 1.0
species: 144639

267929
type: SpeciesReference
stoichiometry: 1.0
species: 144099

144099
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Alanyl_tRNA_Ala__C3H7NO2X

144894
type: Reaction
reactant: 267979
product: 268016
fast: false
reactant: 267992
reversible: true
notes: GENE_ASSOCIATION: ( 27 or 15 ) PROTEIN_ASSOCIATION: AdhC SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.1
product: 268004
reactant: 267966
name: R_alcohol_dehydrogenase__glycerol_

267979
type: SpeciesReference
stoichiometry: 1.0
species: 144334

268016
type: SpeciesReference
stoichiometry: 1.0
species: 144578

144578
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

267992
type: SpeciesReference
stoichiometry: 1.0
species: 144579

144579
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

268004
type: SpeciesReference
stoichiometry: 1.0
species: 144311

267966
type: SpeciesReference
stoichiometry: 1.0
species: 144304

144304
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Glyceraldehyde_C3H6O3

144307
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Glycine_betaine_C5H11NO2

144342
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Hexadecanoate__n_C160__C16H31O2

144398
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_3_Bis_3_hydroxytetradecanoyl__beta_D_glucosaminyl_1_phosphate_C34H64NO12P

144380
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Isopentenyl_diphosphate_C5H9O7P2

144137
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Cob_I_alamin_C62H88CoN13O14P

144175
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Cu2_Cu

145219
type: Reaction
product: 280431
product: 280419
reactant: 280407
notes: GENE_ASSOCIATION: 339 PROTEIN_ASSOCIATION: FabZ SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 4.2.1.58
fast: false
reversible: false
name: R__3R__3_Hydroxybutanoyl_acyl_carrier_protein_hydro_lyase

280431
type: SpeciesReference
stoichiometry: 1.0
species: 144330

280419
type: SpeciesReference
stoichiometry: 1.0
species: 143967

143967
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_trans_Dec_2_enoyl_acyl_carrier_protein_C10H17OX

280407
type: SpeciesReference
stoichiometry: 1.0
species: 143987

143987
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__3R__3_Hydroxydecanoyl_acyl_carrier_protein_C10H19O2X

144013
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Phosphohydroxypyruvate_C3H2O7P

144085
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Agmatine_C5H16N4

144598
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_octadecanoate__n_C180__C18H35O2

144051
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Saccharopine_C11H19N2O6

144628
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_O_Phospho_4_hydroxy_L_threonine_C4H8NO7P

144663
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Pyridoxal_5__phosphate_C8H7NO6P

143994
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__3R__3_Hydroxypalmitoyl_acyl_carrier_protein_C16H31O2X

144848
type: Reaction
product: 266242
product: 266230
reactant: 266218
reactant: 266206
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_acetate_transport_inout_via_proton_symport

266242
type: SpeciesReference
stoichiometry: 1.0
species: 144334

266230
type: SpeciesReference
stoichiometry: 1.0
species: 144054

144054
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Acetate_C2H3O2

266218
type: SpeciesReference
stoichiometry: 1.0
species: 144335

144335
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_H_H

266206
type: SpeciesReference
stoichiometry: 1.0
species: 144055

144055
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Acetate_C2H3O2

143997
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_C___3_Indolyl__glycerol_3_phosphate_C11H12NO6P

145040
type: Reaction
product: 274481
product: 274469
reactant: 274457
notes: GENE_ASSOCIATION: ( 109 or 72 ) PROTEIN_ASSOCIATION: AroB SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.2.3.4
fast: false
reversible: false
name: R_3_dehydroquinate_synthase

274481
type: SpeciesReference
stoichiometry: 1.0
species: 144630

274469
type: SpeciesReference
stoichiometry: 1.0
species: 143981

143981
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Dehydroquinate_C7H9O6

274457
type: SpeciesReference
stoichiometry: 1.0
species: 143939

143939
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Dehydro_3_deoxy_D_arabino_heptonate_7_phosphate_C7H10O10P

145138
type: Reaction
name: R_iron__II__transport_via_ABC_system
product: 277222
product: 277210
reactant: 277162
product: 277198
reactant: 277174
notes: GENE_ASSOCIATION: 387 PROTEIN_ASSOCIATION: FeoB1 SUBSYSTEM: S_Transport PROTEIN_CLASS:
product: 277186
reversible: false
reactant: 277150
fast: false

277222
type: SpeciesReference
stoichiometry: 1.0
species: 144630

277210
type: SpeciesReference
stoichiometry: 1.0
species: 144334

277162
type: SpeciesReference
stoichiometry: 1.0
species: 144330

277198
type: SpeciesReference
stoichiometry: 1.0
species: 144260

144260
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Fe2_Fe

277174
type: SpeciesReference
stoichiometry: 1.0
species: 144262

144262
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Fe2_Fe

277186
type: SpeciesReference
stoichiometry: 1.0
species: 144081

277150
type: SpeciesReference
stoichiometry: 1.0
species: 144126

144573
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Myristoyl_ACP__n_C140ACP__C14H27OX

144315
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Glycero_D_manno_heptose_7_phosphate_C7H13O10P

144368
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

144603
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Ornithine_C5H13N2O2

144659
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_O_Phospho_L_serine_C3H6NO6P

145121
type: Reaction
reactant: 276476
notes: GENE_ASSOCIATION: ( 419 or 268 or 286 ) PROTEIN_ASSOCIATION: FadD SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 6.2.1.3
product: 276500
name: R_fatty_acid__CoA_ligase__dodecanoate_
reactant: 276464
product: 276512
reactant: 276452
fast: false
product: 276488
reversible: true

276476
type: SpeciesReference
stoichiometry: 1.0
species: 144198

276500
type: SpeciesReference
stoichiometry: 1.0
species: 144199

144199
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

276464
type: SpeciesReference
stoichiometry: 1.0
species: 144161

276512
type: SpeciesReference
stoichiometry: 1.0
species: 144639

276452
type: SpeciesReference
stoichiometry: 1.0
species: 144126

276488
type: SpeciesReference
stoichiometry: 1.0
species: 144103

144282
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Glucosamine_1_phosphate_C6H13NO8P

144903
type: Reaction
product: 268366
product: 268353
reactant: 268341
reactant: 268329
notes: GENE_ASSOCIATION: ( 28 or 375 ) PROTEIN_ASSOCIATION: TrpD SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.4.2.18
fast: false
reversible: false
name: R_anthranilate_phosphoribosyltransferase

268366
type: SpeciesReference
stoichiometry: 1.0
species: 144646

144646
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N__5_Phospho_D_ribosyl_anthranilate_C12H13NO9P

268353
type: SpeciesReference
stoichiometry: 1.0
species: 144639

268341
type: SpeciesReference
stoichiometry: 1.0
species: 144656

268329
type: SpeciesReference
stoichiometry: 1.0
species: 144105

144105
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Anthranilate_C7H6NO2

144039
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_Methylthio_5_deoxy_D_ribose_1_phosphate_C6H11O7PS

144021
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_4_Amino_2_methyl_5_phosphomethylpyrimidine_C6H8N3O4P

144803
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_H2_H2

144980
type: Reaction
product: 271995
fast: false
notes: GENE_ASSOCIATION: 416 PROTEIN_ASSOCIATION: CbiE SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.1.1.132
name: R_precorrin_6Y_C5_15_methyltransferase__decarboxylating_
reactant: 271970
reversible: false
product: 272019
product: 272007
reactant: 271983
product: 272032

271995
type: SpeciesReference
stoichiometry: 2.0
species: 144086

144086
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_S_Adenosyl_L_homocysteine_C14H20N6O5S

271970
type: SpeciesReference
stoichiometry: 2.0
species: 144101

272019
type: SpeciesReference
stoichiometry: 1.0
species: 144171

144171
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Cobalt_precorrin_8_C45H52CoN4O14

272007
type: SpeciesReference
stoichiometry: 1.0
species: 144155

271983
type: SpeciesReference
stoichiometry: 1.0
species: 144167

272032
type: SpeciesReference
stoichiometry: 1.0
species: 144334

144192
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dCDP_C9H12N3O10P2

145026
type: Reaction
product: 273939
reactant: 273914
fast: false
notes: GENE_ASSOCIATION: 214 PROTEIN_ASSOCIATION: DfrA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 1.5.1.3
reactant: 273890
name: R_dihydrofolate_reductase
product: 273927
reactant: 273902
reversible: true

273939
type: SpeciesReference
stoichiometry: 1.0
species: 144702

273914
type: SpeciesReference
stoichiometry: 1.0
species: 144581

273890
type: SpeciesReference
stoichiometry: 1.0
species: 144211

144211
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_7_8_Dihydrofolate_C19H19N7O6

273927
type: SpeciesReference
stoichiometry: 1.0
species: 144580

273902
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145352
type: Reaction
product: 285765
product: 285753
reactant: 285741
notes: GENE_ASSOCIATION: ( 30 or 397 ) PROTEIN_ASSOCIATION: MgsA SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 4.2.3.3
fast: false
reversible: false
name: R_methylglyoxal_synthase

285765
type: SpeciesReference
stoichiometry: 1.0
species: 144630

285753
type: SpeciesReference
stoichiometry: 1.0
species: 144571

144571
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Methylglyoxal_C3H4O2

285741
type: SpeciesReference
stoichiometry: 1.0
species: 144210

144732
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Phe__HOX

145065
type: Reaction
product: 275325
reactant: 275313
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_arsenite_exchange

275325
type: SpeciesReference
stoichiometry: 1.0
species: 144787

144787
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_arsenite_AsH3O3

275313
type: SpeciesReference
stoichiometry: 1.0
species: 144119

145100
type: Reaction
product: 275905
reactant: 275893
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Ni2_exchange

275905
type: SpeciesReference
stoichiometry: 1.0
species: 144819

144819
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Ni2_Ni

275893
type: SpeciesReference
stoichiometry: 1.0
species: 144587

144587
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Ni2_Ni

144546
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Methionine_S_oxide_C5H11NO3S

144599
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_octadecenoate__n_C181__C18H33O2

143942
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Demethylmenaquinone_8_C50H70O2

145270
type: Reaction
reactant: 282301
fast: false
reversible: false
reactant: 282289
reactant: 282313
product: 282337
product: 282325
notes: GENE_ASSOCIATION: 338 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.3.1.10
name: R_Icosanoyl_acyl_carrier_proteinmalonyl_CoA__C_acyltransferase

282301
type: SpeciesReference
stoichiometry: 1.0
species: 144334

282289
type: SpeciesReference
stoichiometry: 1.0
species: 143970

143970
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_trans_Icos_2_enoyl_aceyl_carrier_protein_C20H37OX

282313
type: SpeciesReference
stoichiometry: 1.0
species: 144579

282337
type: SpeciesReference
stoichiometry: 1.0
species: 144578

282325
type: SpeciesReference
stoichiometry: 1.0
species: 144366

144366
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Icosanoyl_ACP__n_C200ACP__C20H39OX

145271
type: Reaction
product: 282409
fast: false
reactant: 282349
reactant: 282361
reversible: false
notes: GENE_ASSOCIATION: ( 294 or 273 or 297 ) PROTEIN_ASSOCIATION: HisF SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
product: 282373
name: R_Imidazole_glycerol_3_phosphate_synthase
product: 282397
product: 282385

282409
type: SpeciesReference
stoichiometry: 2.0
species: 144334

282349
type: SpeciesReference
stoichiometry: 1.0
species: 144294

282361
type: SpeciesReference
stoichiometry: 1.0
species: 144651

144651
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

282373
type: SpeciesReference
stoichiometry: 1.0
species: 144089

282397
type: SpeciesReference
stoichiometry: 1.0
species: 144300

282385
type: SpeciesReference
stoichiometry: 1.0
species: 144243

144243
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_erythro_1__Imidazol_4_yl_glycerol_3_phosphate_C6H9N2O6P

143998
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Methyl_2_oxobutanoate_C5H7O3

144214
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_1_4_Dihydroxy_2_naphthoate_C11H7O4

145346
type: Reaction
fast: false
reversible: false
product: 285535
name: R_methionine_synthase
product: 285547
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.1.1.13
reactant: 285511
reactant: 285499
product: 285523

285535
type: SpeciesReference
stoichiometry: 1.0
species: 144410

285547
type: SpeciesReference
stoichiometry: 1.0
species: 144702

285511
type: SpeciesReference
stoichiometry: 1.0
species: 144340

144340
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Homocysteine_C4H9NO2S

285499
type: SpeciesReference
stoichiometry: 1.0
species: 144043

144043
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_Methyltetrahydrofolate_C20H24N7O6

285523
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145606
type: Reaction
product: 295624
product: 295612
reactant: 295600
reactant: 295588
notes: GENE_ASSOCIATION: 160 PROTEIN_ASSOCIATION: TktB SUBSYSTEM: S_Pentose_Phosphate_Pathway PROTEIN_CLASS: 2.2.1.1
fast: false
reversible: true
name: R_transketolase

295624
type: SpeciesReference
stoichiometry: 1.0
species: 144674

144674
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Sedoheptulose_7_phosphate_C7H13O10P

295612
type: SpeciesReference
stoichiometry: 1.0
species: 144279

295600
type: SpeciesReference
stoichiometry: 1.0
species: 144779

295588
type: SpeciesReference
stoichiometry: 1.0
species: 144667

144252
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_FAD_C27H31N9O15P2

144047
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_6_Pyruvoyl_5_6_7_8_tetrahydropterin_C9H11N5O3

144829
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Zinc_Zn

145513
type: Reaction
reactant: 292016
fast: false
notes: GENE_ASSOCIATION: 129 PROTEIN_ASSOCIATION: Ppsa SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 2.7.9.2
product: 292064
reactant: 292004
reactant: 292028
product: 292052
name: R_phosphoenolpyruvate_synthase
product: 292076
product: 292040
reversible: false

292016
type: SpeciesReference
stoichiometry: 1.0
species: 144330

292064
type: SpeciesReference
stoichiometry: 1.0
species: 144616

144616
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Phosphoenolpyruvate_C3H2O6P

292004
type: SpeciesReference
stoichiometry: 1.0
species: 144126

292028
type: SpeciesReference
stoichiometry: 1.0
species: 144664

292052
type: SpeciesReference
stoichiometry: 2.0
species: 144334

292076
type: SpeciesReference
stoichiometry: 1.0
species: 144630

292040
type: SpeciesReference
stoichiometry: 1.0
species: 144103

144675
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Sulfur_S

145089
type: Reaction
product: 275710
reactant: 275698
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Isoleucine_exchange

275710
type: SpeciesReference
stoichiometry: 1.0
species: 144809

144809
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_L_Isoleucine_C6H13NO2

275698
type: SpeciesReference
stoichiometry: 1.0
species: 144372

144740
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Val__HOX

144283
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Glucosamine_6_phosphate_C6H13NO8P

144796
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_1_4_Dichlorobenzene__para_Dichlorobenzene__C6H4Cl2

145090
type: Reaction
product: 275735
reactant: 275722
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_K_exchange

275735
type: SpeciesReference
stoichiometry: 1.0
species: 144810

144810
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_K_K

275722
type: SpeciesReference
stoichiometry: 1.0
species: 144386

144386
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_K_K

144831
type: Reaction
product: 265554
product: 265542
reactant: 265530
reactant: 265518
notes: GENE_ASSOCIATION: 333 PROTEIN_ASSOCIATION: GabT SUBSYSTEM: S_Carbohydrate_Metabolism PROTEIN_CLASS: 2.6.1.19
fast: false
reversible: false
name: R_4_aminobutyrate_transaminase

265554
type: SpeciesReference
stoichiometry: 1.0
species: 144694

144694
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Succinic_semialdehyde_C4H5O3

265542
type: SpeciesReference
stoichiometry: 1.0
species: 144300

265530
type: SpeciesReference
stoichiometry: 1.0
species: 144091

144091
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Oxoglutarate_C5H4O5

265518
type: SpeciesReference
stoichiometry: 1.0
species: 144015

144015
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_4_Aminobutanoate_C4H9NO2

145005
type: Reaction
product: 273201
product: 273189
product: 273177
reactant: 273165
notes: GENE_ASSOCIATION: 308 PROTEIN_ASSOCIATION: RibA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_3_4_Dihydroxy_2_butanone_4_phosphate

273201
type: SpeciesReference
stoichiometry: 1.0
species: 144334

273189
type: SpeciesReference
stoichiometry: 1.0
species: 144270

144270
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Formate_CH1O2

273177
type: SpeciesReference
stoichiometry: 1.0
species: 144188

144188
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_4_dihydroxy_2_butanone_4_phosphate_C4H7O6P

273165
type: SpeciesReference
stoichiometry: 1.0
species: 144673

145583
type: Reaction
product: 294720
product: 294708
reactant: 294696
reactant: 294684
notes: GENE_ASSOCIATION: 272 PROTEIN_ASSOCIATION: SodA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.15.1.1
fast: false
reversible: false
name: R_superoxide_dismutase

294720
type: SpeciesReference
stoichiometry: 1.0
species: 144594

144594
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_O2_O2

294708
type: SpeciesReference
stoichiometry: 1.0
species: 144328

144328
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Hydrogen_peroxide_H2O2

294696
type: SpeciesReference
stoichiometry: 2.0
species: 144593

144593
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Superoxide_O2

294684
type: SpeciesReference
stoichiometry: 2.0
species: 144334

145331
type: Reaction
notes: GENE_ASSOCIATION: 274 PROTEIN_ASSOCIATION: FabF SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.41
product: 284919
reactant: 284871
product: 284907
product: 284931
reactant: 284883
name: R_Dodecanoyl_acyl_carrier_proteinmalonyl_acyl_carrier_protein__C_acyltransferase
reactant: 284895
fast: false
reversible: false

284919
type: SpeciesReference
stoichiometry: 1.0
species: 144050

284871
type: SpeciesReference
stoichiometry: 1.0
species: 144196

284907
type: SpeciesReference
stoichiometry: 1.0
species: 144010

144010
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Oxotetradecanoyl_acyl_carrier_protein_C14H25O2X

284931
type: SpeciesReference
stoichiometry: 1.0
species: 144155

284883
type: SpeciesReference
stoichiometry: 1.0
species: 144334

284895
type: SpeciesReference
stoichiometry: 1.0
species: 144403

144736
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Thr__HOX

144945
type: Reaction
reactant: 270194
reactant: 270279
reactant: 270011
reactant: 270544
reactant: 269999
reactant: 270243
reactant: 270303
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
reactant: 270424
reactant: 270096
reactant: 270327
reactant: 270084
reactant: 270219
reactant: 270023
reactant: 270532
product: 270580
reactant: 270133
product: 270592
reversible: false
reactant: 270048
fast: false
reactant: 270339
reactant: 270472
reactant: 270267
reactant: 270364
reactant: 270291
reactant: 270072
reactant: 270448
reactant: 270182
reactant: 270412
reactant: 270388
reactant: 269987
reactant: 270520
product: 270568
reactant: 270484
name: R_Dehalococcoides_CBDB1_biomass_demand
reactant: 270400
reactant: 270556
reactant: 270255
reactant: 270315
reactant: 270158
reactant: 270508
reactant: 270108
reactant: 270035
reactant: 270460
reactant: 270496
reactant: 270060
reactant: 270145
reactant: 270436
reactant: 270351
reactant: 270170
reactant: 270376
reactant: 270231
reactant: 270121
reactant: 270207
reactant: 269975

270194
type: SpeciesReference
stoichiometry: 0.0491
species: 144300

270279
type: SpeciesReference
stoichiometry: 0.0047
species: 144359

144359
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Homospermidine_C8H24N3

270011
type: SpeciesReference
stoichiometry: 0.001
species: 144103

270544
type: SpeciesReference
stoichiometry: 0.0985
species: 144771

269999
type: SpeciesReference
stoichiometry: 0.0958
species: 144095

270243
type: SpeciesReference
stoichiometry: 85.5
species: 144330

270303
type: SpeciesReference
stoichiometry: 0.0545
species: 144371

144371
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Isoleucine_C6H13NO2

270424
type: SpeciesReference
stoichiometry: 0.0347
species: 144622

144622
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Phenylalanine_C9H11NO2

270096
type: SpeciesReference
stoichiometry: 0.0172
species: 144178

270327
type: SpeciesReference
stoichiometry: 0.064
species: 144400

144400
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Lysine_C6H15N2O2

270084
type: SpeciesReference
stoichiometry: 0.1063
species: 144174

144174
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_CTP_C9H12N3O14P3

270219
type: SpeciesReference
stoichiometry: 0.0154
species: 144312

144312
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_glycogen_C6H10O5

270023
type: SpeciesReference
stoichiometry: 0.0552
species: 144111

270532
type: SpeciesReference
stoichiometry: 0.0259
species: 144748

270580
type: SpeciesReference
stoichiometry: 85.5
species: 144334

270133
type: SpeciesReference
stoichiometry: 0.0019
species: 144198

270592
type: SpeciesReference
stoichiometry: 85.5
species: 144630

270048
type: SpeciesReference
stoichiometry: 0.045
species: 144122

144122
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Aspartate_C4H6NO4

270339
type: SpeciesReference
stoichiometry: 0.0288
species: 144410

270472
type: SpeciesReference
stoichiometry: 3.0E-6
species: 144692

144692
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Succinyl_CoA_C25H35N7O19P3S

270267
type: SpeciesReference
stoichiometry: 0.0178
species: 144351

144351
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Histidine_C6H9N3O2

270364
type: SpeciesReference
stoichiometry: 1.0E-4
species: 144579

270291
type: SpeciesReference
stoichiometry: 0.001
species: 144367

270072
type: SpeciesReference
stoichiometry: 6.0E-6
species: 144161

270448
type: SpeciesReference
stoichiometry: 0.0262
species: 144660

144660
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Putrescine_C4H14N2

270182
type: SpeciesReference
stoichiometry: 0.0491
species: 144294

270412
type: SpeciesReference
stoichiometry: 7.0E-4
species: 144599

270388
type: SpeciesReference
stoichiometry: 4.0E-4
species: 144581

269987
type: SpeciesReference
stoichiometry: 0.0047
species: 144079

144079
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Adenosylcobalamin_C72H100CoN18O17P

270520
type: SpeciesReference
stoichiometry: 0.0154
species: 144746

144746
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tetradecanoate__C140__C14H27O2

270568
type: SpeciesReference
stoichiometry: 85.5
species: 144081

270484
type: SpeciesReference
stoichiometry: 1.0E-4
species: 144702

270400
type: SpeciesReference
stoichiometry: 0.0376
species: 144598

270556
type: SpeciesReference
stoichiometry: 0.0789
species: 144772

144772
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Valine_C5H11NO2

270255
type: SpeciesReference
stoichiometry: 0.0865
species: 144342

270315
type: SpeciesReference
stoichiometry: 0.0845
species: 144391

144391
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Leucine_C6H13NO2

270158
type: SpeciesReference
stoichiometry: 0.0955
species: 144235

270508
type: SpeciesReference
stoichiometry: 0.0107
species: 144741

144741
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Tryptophan_C11H12N2O2

270108
type: SpeciesReference
stoichiometry: 0.0955
species: 144187

144187
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dATP_C10H12N5O12P3

270035
type: SpeciesReference
stoichiometry: 0.045
species: 144121

144121
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Asparagine_C4H8N2O3

270460
type: SpeciesReference
stoichiometry: 0.0405
species: 144677

144677
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Serine_C3H7NO3

270496
type: SpeciesReference
stoichiometry: 0.0473
species: 144707

144707
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Threonine_C4H9NO3

270060
type: SpeciesReference
stoichiometry: 85.5
species: 144126

270145
type: SpeciesReference
stoichiometry: 0.0847
species: 144208

144208
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dGTP_C10H12N5O13P3

270436
type: SpeciesReference
stoichiometry: 0.0415
species: 144653

144653
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Proline_C5H9NO2

270351
type: SpeciesReference
stoichiometry: 0.0022
species: 144578

270170
type: SpeciesReference
stoichiometry: 0.0471
species: 144250

144250
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Fatty_acid__Iso_C170__C17H33O2

270376
type: SpeciesReference
stoichiometry: 1.0E-4
species: 144580

270231
type: SpeciesReference
stoichiometry: 0.1586
species: 144322

144322
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_GTP_C10H12N5O14P3

270121
type: SpeciesReference
stoichiometry: 0.0847
species: 144195

144195
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dCTP_C9H12N3O13P3

270207
type: SpeciesReference
stoichiometry: 0.1145
species: 144303

269975
type: SpeciesReference
stoichiometry: 1.0E-4
species: 144058

144278
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Glucose_1_phosphate_C6H11O9P

144946
type: Reaction
notes: GENE_ASSOCIATION: 338 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.3.1.10
name: R_Butyryl_acyl_carrier_proteinmalonyl_CoA_C_acyltransferase
reactant: 270629
reactant: 270616
product: 270654
reactant: 270604
fast: false
product: 270641
reversible: false

270629
type: SpeciesReference
stoichiometry: 1.0
species: 144579

270616
type: SpeciesReference
stoichiometry: 1.0
species: 144334

270654
type: SpeciesReference
stoichiometry: 1.0
species: 144578

270604
type: SpeciesReference
stoichiometry: 1.0
species: 143935

143935
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_But_2_enoyl_acyl_carrier_protein_C4H5OX

270641
type: SpeciesReference
stoichiometry: 1.0
species: 144130

144130
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Butyryl_acyl_carrier_protein_C4H7OX

143943
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Demethylmenaquinol_8_C50H72O2

144985
type: Reaction
product: 272353
fast: false
reactant: 272275
product: 272366
product: 272314
notes: GENE_ASSOCIATION: 366 PROTEIN_ASSOCIATION: PyrG SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 6.3.4.2
product: 272327
name: R_CTP_synthase__glutamine_
product: 272340
reactant: 272262
reactant: 272288
reactant: 272301
reversible: false

272353
type: SpeciesReference
stoichiometry: 2.0
species: 144334

272275
type: SpeciesReference
stoichiometry: 1.0
species: 144294

272366
type: SpeciesReference
stoichiometry: 1.0
species: 144630

272314
type: SpeciesReference
stoichiometry: 1.0
species: 144081

272327
type: SpeciesReference
stoichiometry: 1.0
species: 144174

272340
type: SpeciesReference
stoichiometry: 1.0
species: 144300

272262
type: SpeciesReference
stoichiometry: 1.0
species: 144126

272288
type: SpeciesReference
stoichiometry: 1.0
species: 144330

272301
type: SpeciesReference
stoichiometry: 1.0
species: 144771

145537
type: Reaction
product: 293002
product: 292990
reactant: 292978
reactant: 292966
notes: GENE_ASSOCIATION: ( ( 207 or 281 or 112 ) or 359 ) PROTEIN_ASSOCIATION: ( RluB ) or ( RluD ) SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 4.2.1.70
fast: false
reversible: false
name: R_pseudouridylate_synthase

293002
type: SpeciesReference
stoichiometry: 1.0
species: 144658

144658
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Pseudouridine_5__phosphate_C9H11N2O9P

292990
type: SpeciesReference
stoichiometry: 1.0
species: 144330

292978
type: SpeciesReference
stoichiometry: 1.0
species: 144768

144768
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Uracil_C4H4N2O2

292966
type: SpeciesReference
stoichiometry: 1.0
species: 144667

145562
type: Reaction
product: 293958
product: 293982
notes: GENE_ASSOCIATION: ( 52 or 364 ) PROTEIN_ASSOCIATION: NrdD SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 1.17.4.2
reactant: 293946
reactant: 293934
product: 293970
name: R_ribonucleoside_triphosphate_reductase__CTP_
fast: false
reversible: false

293958
type: SpeciesReference
stoichiometry: 1.0
species: 144195

293982
type: SpeciesReference
stoichiometry: 1.0
species: 144712

293946
type: SpeciesReference
stoichiometry: 1.0
species: 144714

293934
type: SpeciesReference
stoichiometry: 1.0
species: 144174

293970
type: SpeciesReference
stoichiometry: 1.0
species: 144330

145068
type: Reaction
product: 275373
reactant: 275361
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Citrate_exchange

275373
type: SpeciesReference
stoichiometry: 1.0
species: 144790

144790
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Citrate_C6H5O7

275361
type: SpeciesReference
stoichiometry: 1.0
species: 144147

144147
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Citrate_C6H5O7

144154
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

145577
type: Reaction
product: 294480
product: 294468
reactant: 294456
notes: GENE_ASSOCIATION: 320 PROTEIN_ASSOCIATION: IlvA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.3.1.17
fast: false
reversible: true
name: R_L_serine_deaminase

294480
type: SpeciesReference
stoichiometry: 1.0
species: 144664

294468
type: SpeciesReference
stoichiometry: 1.0
species: 144582

144582
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Ammonium_H4N

294456
type: SpeciesReference
stoichiometry: 1.0
species: 144677

144906
type: Reaction
product: 268464
reactant: 268452
notes: GENE_ASSOCIATION: 437 PROTEIN_ASSOCIATION: ArsB2 SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: false
name: R_antimonite__transporter_via_uniport

268464
type: SpeciesReference
stoichiometry: 1.0
species: 144107

144107
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Antimonite_Sb

268452
type: SpeciesReference
stoichiometry: 1.0
species: 144106

144106
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Antimonite_Sb

144218
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Dihydroneopterin_monophosphate_C9H12N5O7P

143938
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_1__2_Carboxyphenylamino__1_deoxy_D_ribulose_5_phosphate_C12H13NO9P

145390
type: Reaction
product: 287269
product: 287257
reactant: 287244
reactant: 287231
notes: GENE_ASSOCIATION: 68 PROTEIN_ASSOCIATION: Ndk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.4.6
fast: false
reversible: true
name: R_nucleoside_diphosphate_kinase__ATPCDP_

287269
type: SpeciesReference
stoichiometry: 1.0
species: 144174

287257
type: SpeciesReference
stoichiometry: 1.0
species: 144081

287244
type: SpeciesReference
stoichiometry: 1.0
species: 144142

144142
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_CDP_C9H12N3O11P2

287231
type: SpeciesReference
stoichiometry: 1.0
species: 144126

144390
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Lactaldehyde_C3H6O2

144679
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dihydrosirohydrochlorin_C42H40N4O16

144642
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Protoporphyrinogen_IX_C34H38N4O4

145357
type: Reaction
product: 285898
reversible: false
product: 285910
reactant: 285849
reactant: 285861
reactant: 285837
product: 285873
fast: false
notes: GENE_ASSOCIATION: ( 155 and 157 and 156 ) PROTEIN_ASSOCIATION: ( ZnuA and ZnuB and ZnuC ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
product: 285886
name: R_manganese_transport_via_ABC_system

285898
type: SpeciesReference
stoichiometry: 1.0
species: 144557

144557
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Mn2_Mn

285910
type: SpeciesReference
stoichiometry: 1.0
species: 144630

285849
type: SpeciesReference
stoichiometry: 1.0
species: 144330

285861
type: SpeciesReference
stoichiometry: 1.0
species: 144558

144558
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Mn2_Mn

285837
type: SpeciesReference
stoichiometry: 1.0
species: 144126

285873
type: SpeciesReference
stoichiometry: 1.0
species: 144081

285886
type: SpeciesReference
stoichiometry: 1.0
species: 144334

143973
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_trans_Oct_2_enoyl_acp_C8H13OX

144706
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Allo_threonine_C4H9NO3

145633
type: Reaction
product: 296608
product: 296596
reactant: 296584
reactant: 296572
notes: GENE_ASSOCIATION: 105 PROTEIN_ASSOCIATION: Cmk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
fast: false
reversible: true
name: R_UMP_kinase

296608
type: SpeciesReference
stoichiometry: 1.0
species: 144761

144761
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_UDP_C9H11N2O12P2

296596
type: SpeciesReference
stoichiometry: 1.0
species: 144081

296584
type: SpeciesReference
stoichiometry: 1.0
species: 144765

144765
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_UMP_C9H11N2O9P

296572
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145145
type: Reaction
product: 277488
product: 277476
reactant: 277464
reactant: 277452
notes: GENE_ASSOCIATION: 420 PROTEIN_ASSOCIATION: Frd SUBSYSTEM: S_Citrate_Cycle__TCA_ PROTEIN_CLASS: 1.3.5.1
fast: false
reversible: true
name: R_succinate_dehydrogenase__menaquinone_7_

277488
type: SpeciesReference
stoichiometry: 1.0
species: 144562

144562
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Menaquinol_7_C46H66O2

277476
type: SpeciesReference
stoichiometry: 1.0
species: 144276

144276
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Fumarate_C4H2O4

277464
type: SpeciesReference
stoichiometry: 1.0
species: 144691

144691
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Succinate_C4H4O4

277452
type: SpeciesReference
stoichiometry: 1.0
species: 144564

144564
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Menaquinone_7_C46H64O2

144059
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N_Acetyl_L_glutamyl_5_phosphate_C7H9NO8P

144590
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_NMN_C11H14N2O8P

144347
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_all_trans_Hexaprenyl_diphosphate_C30H49O7P2

145556
type: Reaction
reactant: 293693
name: R_ribonucleoside_diphosphate_reductase__CDP_
reversible: false
product: 293729
product: 293741
fast: false
reactant: 293705
product: 293717
notes: GENE_ASSOCIATION: ( 52 or 428 or 151 ) PROTEIN_ASSOCIATION: NrdEF SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 1.17.4.1

293693
type: SpeciesReference
stoichiometry: 1.0
species: 144142

293729
type: SpeciesReference
stoichiometry: 1.0
species: 144330

293741
type: SpeciesReference
stoichiometry: 1.0
species: 144712

293705
type: SpeciesReference
stoichiometry: 1.0
species: 144714

293717
type: SpeciesReference
stoichiometry: 1.0
species: 144192

145124
type: Reaction
name: R_fatty_acid__CoA_ligase__hexadecanoate_
product: 276632
notes: GENE_ASSOCIATION: ( 419 or 268 or 286 ) PROTEIN_ASSOCIATION: FadD SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 6.2.1.3
fast: false
reactant: 276596
product: 276656
product: 276644
reversible: true
reactant: 276620
reactant: 276608

276632
type: SpeciesReference
stoichiometry: 1.0
species: 144103

276596
type: SpeciesReference
stoichiometry: 1.0
species: 144126

276656
type: SpeciesReference
stoichiometry: 1.0
species: 144639

276644
type: SpeciesReference
stoichiometry: 1.0
species: 144632

144632
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

276620
type: SpeciesReference
stoichiometry: 1.0
species: 144342

276608
type: SpeciesReference
stoichiometry: 1.0
species: 144161

144842
type: Reaction
product: 266013
reactant: 266001
notes: GENE_ASSOCIATION: ( 93 and 94 and 218 and 219 ) PROTEIN_ASSOCIATION: Aco3 SUBSYSTEM: S_Citrate_Cycle__TCA_ PROTEIN_CLASS: 4.2.1.3
fast: false
reversible: true
name: R_aconitase

266013
type: SpeciesReference
stoichiometry: 1.0
species: 144364

144364
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Isocitrate_C6H5O7

266001
type: SpeciesReference
stoichiometry: 1.0
species: 144146

144146
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Citrate_C6H5O7

144887
type: Reaction
product: 267736
reactant: 267724
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 5.1.1.1
fast: false
reversible: true
name: R_alanine_racemase

267736
type: SpeciesReference
stoichiometry: 1.0
species: 144094

144094
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Alanine_C3H7NO2

267724
type: SpeciesReference
stoichiometry: 1.0
species: 144095

144880
type: Reaction
product: 267472
product: 267460
reactant: 267448
reactant: 267435
notes: GENE_ASSOCIATION: 116 PROTEIN_ASSOCIATION: AhcY SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 3.3.1.1
fast: false
reversible: true
name: R_adenosylhomocysteinase

267472
type: SpeciesReference
stoichiometry: 1.0
species: 144340

267460
type: SpeciesReference
stoichiometry: 1.0
species: 144078

267448
type: SpeciesReference
stoichiometry: 1.0
species: 144330

267435
type: SpeciesReference
stoichiometry: 1.0
species: 144086

144360
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Hypoxanthine_C5H4N4O

145451
type: Reaction
product: 289682
product: 289669
reactant: 289657
reactant: 289645
notes: GENE_ASSOCIATION: 333 PROTEIN_ASSOCIATION: PuuT SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.6.1.13
fast: false
reversible: false
name: R_ornithine_transaminase

289682
type: SpeciesReference
stoichiometry: 1.0
species: 144299

144299
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Glutamate_5_semialdehyde_C5H9NO3

289669
type: SpeciesReference
stoichiometry: 1.0
species: 144300

289657
type: SpeciesReference
stoichiometry: 1.0
species: 144603

289645
type: SpeciesReference
stoichiometry: 1.0
species: 144091

145619
type: Reaction
product: 296091
reactant: 296079
reversible: false
name: R_Tryptophanyl_tRNA_synthetase
fast: false
product: 296103
product: 296115
reactant: 296055
notes: GENE_ASSOCIATION: 352 PROTEIN_ASSOCIATION: TrpS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.2
reactant: 296067

296091
type: SpeciesReference
stoichiometry: 1.0
species: 144103

296079
type: SpeciesReference
stoichiometry: 1.0
species: 144741

296103
type: SpeciesReference
stoichiometry: 1.0
species: 144639

296115
type: SpeciesReference
stoichiometry: 1.0
species: 144742

144742
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Tryptophanyl_tRNA_Trp__C11H12N2O2X

296055
type: SpeciesReference
stoichiometry: 1.0
species: 144126

296067
type: SpeciesReference
stoichiometry: 1.0
species: 144737

144737
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Trp__HOX

145625
type: Reaction
product: 296367
product: 296356
reactant: 296344
reactant: 296332
notes: GENE_ASSOCIATION: 312 PROTEIN_ASSOCIATION: MurAA SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 2.5.1.7
fast: false
reversible: false
name: R_UDP_N_acetylglucosamine_1_carboxyvinyltransferase

296367
type: SpeciesReference
stoichiometry: 1.0
species: 144752

144752
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

296356
type: SpeciesReference
stoichiometry: 1.0
species: 144630

296344
type: SpeciesReference
stoichiometry: 1.0
species: 144754

144754
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

296332
type: SpeciesReference
stoichiometry: 1.0
species: 144616

144031
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_4__Phosphopantothenate_C9H15NO8P

144813
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Mg_Mg

144355
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Histidyl_tRNA_His__C6H9N3O2X

144608
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Pantetheine_4__phosphate_C11H21N2O7PS

144643
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Inorganic_triphosphate_HO10P3

145246
type: Reaction
reversible: false
product: 281471
name: R_hydroxymethylpyrimidine_kinase__UTP_
reactant: 281447
notes: GENE_ASSOCIATION: 203 PROTEIN_ASSOCIATION: ThiE SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.7.1.49
reactant: 281459
product: 281483
fast: false
product: 281495

281471
type: SpeciesReference
stoichiometry: 1.0
species: 144021

281447
type: SpeciesReference
stoichiometry: 1.0
species: 144019

144019
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_4_Amino_5_hydroxymethyl_2_methylpyrimidine_C6H9N3O

281459
type: SpeciesReference
stoichiometry: 1.0
species: 144771

281483
type: SpeciesReference
stoichiometry: 1.0
species: 144334

281495
type: SpeciesReference
stoichiometry: 1.0
species: 144761

143977
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Carboxy_2_hydroxy_4_methylpentanoate_C7H10O5

144866
type: Reaction
product: 266941
product: 266929
reactant: 266917
reactant: 266904
notes: GENE_ASSOCIATION: 111 PROTEIN_ASSOCIATION: Adk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
fast: false
reversible: true
name: R_adentylate_kinase__ITP_

266941
type: SpeciesReference
stoichiometry: 1.0
species: 144370

144370
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_IDP_C10H11N4O11P2

266929
type: SpeciesReference
stoichiometry: 1.0
species: 144081

266917
type: SpeciesReference
stoichiometry: 1.0
species: 144382

144382
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_ITP_C10H11N4O14P3

266904
type: SpeciesReference
stoichiometry: 1.0
species: 144103

144231
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dTDP_C10H13N2O11P2

144591
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Nitrite_NO2

144026
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_4_Methyl_2_oxopentanoate_C6H9O3

144098
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__S__2_Acetolactate_C5H7O4

145477
type: Reaction
product: 290708
reactant: 290696
notes: GENE_ASSOCIATION: 113 PROTEIN_ASSOCIATION: Pgi SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 5.3.1.9
fast: false
reversible: true
name: R_glucose_6_phosphate_isomerase

290708
type: SpeciesReference
stoichiometry: 1.0
species: 144248

290696
type: SpeciesReference
stoichiometry: 1.0
species: 144280

144280
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Glucose_6_phosphate_C6H11O9P

145300
type: Reaction
product: 283567
product: 283555
reactant: 283543
reactant: 283531
notes: GENE_ASSOCIATION: 328 PROTEIN_ASSOCIATION: IxpP SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_dITP_pyrophosphatase

283567
type: SpeciesReference
stoichiometry: 1.0
species: 144639

283555
type: SpeciesReference
stoichiometry: 1.0
species: 144220

144220
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dIMP_C10H12N4O7P

283543
type: SpeciesReference
stoichiometry: 1.0
species: 144330

283531
type: SpeciesReference
stoichiometry: 1.0
species: 144222

144222
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dITP_C10H11N4O13P3

145301
type: Reaction
name: R_ketol_acid_reductoisomerase__2_3_dihydroxy_3_methylbutanoate_
product: 283627
fast: false
reactant: 283591
reversible: true
product: 283603
notes: GENE_ASSOCIATION: 221 PROTEIN_ASSOCIATION: IlvC SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.1.1.86
reactant: 283579
product: 283615

283627
type: SpeciesReference
stoichiometry: 1.0
species: 144581

283591
type: SpeciesReference
stoichiometry: 1.0
species: 144580

283603
type: SpeciesReference
stoichiometry: 1.0
species: 144098

283579
type: SpeciesReference
stoichiometry: 1.0
species: 143923

143923
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__R__2_3_Dihydroxy_3_methylbutanoate_C5H9O4

283615
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145600
type: Reaction
product: 295311
product: 295299
reactant: 295287
reactant: 295275
notes: GENE_ASSOCIATION: 165 PROTEIN_ASSOCIATION: CobQ-CobD SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_threonine_phosphate_decarboxylase

295311
type: SpeciesReference
stoichiometry: 1.0
species: 144155

295299
type: SpeciesReference
stoichiometry: 1.0
species: 143919

143919
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_1_Aminopropan_2_ol_O_phosphate_C3H9NO4P

295287
type: SpeciesReference
stoichiometry: 1.0
species: 144708

144708
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Threonine_O_3_phosphate_C4H8NO6P

295275
type: SpeciesReference
stoichiometry: 1.0
species: 144334

144001
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Oxododecanoyl_acyl_carrier_protein_C12H21O2X

144586
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Ni2_Ni

144057
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Acetaldehyde_C2H4O

144821
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Tetrchloroethene_C2Cl4

145012
type: Reaction
product: 273491
product: 273478
reactant: 273466
reactant: 273454
notes: GENE_ASSOCIATION: 9 PROTEIN_ASSOCIATION: Gmk SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS:
fast: false
reversible: true
name: R_deoxyguanylate_kinase__dGMPATP_

273491
type: SpeciesReference
stoichiometry: 1.0
species: 144204

144204
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dGDP_C10H12N5O10P2

273478
type: SpeciesReference
stoichiometry: 1.0
species: 144081

273466
type: SpeciesReference
stoichiometry: 1.0
species: 144206

144206
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dGMP_C10H12N5O7P

273454
type: SpeciesReference
stoichiometry: 1.0
species: 144126

143985
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__3R__3_Hydroxybutanoyl_acyl_carrier_protein_C4H7O2X

145052
type: Reaction
product: 274938
product: 274926
reactant: 274914
reactant: 274902
notes: GENE_ASSOCIATION: 202 PROTEIN_ASSOCIATION: Tmk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.4.9
fast: false
reversible: true
name: R_dTMP_kinase

274938
type: SpeciesReference
stoichiometry: 1.0
species: 144231

274926
type: SpeciesReference
stoichiometry: 1.0
species: 144081

274914
type: SpeciesReference
stoichiometry: 1.0
species: 144234

274902
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145340
type: Reaction
product: 285306
product: 285294
reactant: 285282
notes: GENE_ASSOCIATION: 17 PROTEIN_ASSOCIATION: IspF SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_2_C_methyl_D_erythritol_2_4_cyclodiphosphate_synthase

285306
type: SpeciesReference
stoichiometry: 1.0
species: 144153

144153
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_CMP_C9H12N3O8P

285294
type: SpeciesReference
stoichiometry: 1.0
species: 143953

143953
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_C_methyl_D_erythritol_2_4_cyclodiphosphate_C5H10O9P2

285282
type: SpeciesReference
stoichiometry: 1.0
species: 143963

143922
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_3_Dihydrodipicolinate_C7H5NO4

144647
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

145283
type: Reaction
product: 282915
product: 282879
product: 282891
reactant: 282843
reversible: true
fast: false
reactant: 282855
notes: GENE_ASSOCIATION: ( 269 and 270 ) PROTEIN_ASSOCIATION: IorAB1 SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS:
product: 282903
reactant: 282867
name: R_indolepyruvate_ferredoxin_oxidoreductase

282915
type: SpeciesReference
stoichiometry: 1.0
species: 144378

144378
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

282879
type: SpeciesReference
stoichiometry: 1.0
species: 144155

282891
type: SpeciesReference
stoichiometry: 2.0
species: 144259

282843
type: SpeciesReference
stoichiometry: 1.0
species: 144161

282855
type: SpeciesReference
stoichiometry: 2.0
species: 144256

282903
type: SpeciesReference
stoichiometry: 1.0
species: 144334

282867
type: SpeciesReference
stoichiometry: 1.0
species: 144379

144379
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Indolepyruvate_C11H8NO3

145571
type: Reaction
reactant: 294251
product: 294275
reactant: 294215
name: R_sulfate_adenylyltransferase
product: 294287
reversible: false
reactant: 294227
product: 294263
reactant: 294239
notes: GENE_ASSOCIATION: ( 282 or 343 or 237 or 283 ) PROTEIN_ASSOCIATION: CysH SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.7.7.4
product: 294299
fast: false

294251
type: SpeciesReference
stoichiometry: 1.0
species: 144687

144687
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Sulfate_O4S

294275
type: SpeciesReference
stoichiometry: 1.0
species: 144287

144287
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_GDP_C10H12N5O11P2

294215
type: SpeciesReference
stoichiometry: 1.0
species: 144126

294287
type: SpeciesReference
stoichiometry: 1.0
species: 144630

294227
type: SpeciesReference
stoichiometry: 1.0
species: 144322

294263
type: SpeciesReference
stoichiometry: 1.0
species: 144110

294239
type: SpeciesReference
stoichiometry: 1.0
species: 144330

294299
type: SpeciesReference
stoichiometry: 1.0
species: 144639

144232
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dTDPglucose_C16H24N2O16P2

144900
type: Reaction
product: 268257
product: 268245
reactant: 268233
reactant: 268221
notes: GENE_ASSOCIATION: 333 PROTEIN_ASSOCIATION: BioA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.6.1.62
fast: false
reversible: true
name: R_adenosylmethionine_8_amino_7_oxononanoate_transaminase

268257
type: SpeciesReference
stoichiometry: 1.0
species: 144186

144186
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_7_8_Diaminononanoate_C9H21N2O2

268245
type: SpeciesReference
stoichiometry: 1.0
species: 144102

144102
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_S_Adenosyl_4_methylthio_2_oxobutanoate_C15H19N5O6S

268233
type: SpeciesReference
stoichiometry: 1.0
species: 144101

268221
type: SpeciesReference
stoichiometry: 1.0
species: 144049

144049
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_8_Amino_7_oxononanoate_C9H17NO3

144288
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_GDP_D_mannose_C16H23N5O16P2

144953
type: Reaction
reactant: 270980
reactant: 270968
notes: GENE_ASSOCIATION: ( 316 and 317 ) PROTEIN_ASSOCIATION: CarAB SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 6.3.5.5
product: 271004
reversible: true
product: 271040
name: R_carbamoyl_phosphate_synthase__glutamine_hydrolysing_
reactant: 270956
product: 271028
fast: false
reactant: 270944
product: 270992
product: 271016

270980
type: SpeciesReference
stoichiometry: 1.0
species: 144339

144339
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Bicarbonate_CHO3

270968
type: SpeciesReference
stoichiometry: 1.0
species: 144330

271004
type: SpeciesReference
stoichiometry: 1.0
species: 144138

144138
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Carbamoyl_phosphate_CH2NO5P

271040
type: SpeciesReference
stoichiometry: 1.0
species: 144630

270956
type: SpeciesReference
stoichiometry: 1.0
species: 144294

271028
type: SpeciesReference
stoichiometry: 2.0
species: 144334

270944
type: SpeciesReference
stoichiometry: 2.0
species: 144126

270992
type: SpeciesReference
stoichiometry: 2.0
species: 144081

271016
type: SpeciesReference
stoichiometry: 1.0
species: 144300

143917
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Phospho_D_glyceroyl_phosphate_C3H4O10P2

144992
type: Reaction
product: 272708
product: 272696
reactant: 272684
reactant: 272672
notes: GENE_ASSOCIATION: 105 PROTEIN_ASSOCIATION: Cmk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.4.14
fast: false
reversible: true
name: R_cytidylate_kinase__CMP_

272708
type: SpeciesReference
stoichiometry: 1.0
species: 144142

272696
type: SpeciesReference
stoichiometry: 1.0
species: 144081

272684
type: SpeciesReference
stoichiometry: 1.0
species: 144153

272672
type: SpeciesReference
stoichiometry: 1.0
species: 144126

144993
type: Reaction
product: 272756
product: 272744
reactant: 272732
reactant: 272720
notes: GENE_ASSOCIATION: 105 PROTEIN_ASSOCIATION: Cmk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.4.14
fast: false
reversible: true
name: R_cytidylate_kinase__dCMP_

272756
type: SpeciesReference
stoichiometry: 1.0
species: 144192

272744
type: SpeciesReference
stoichiometry: 1.0
species: 144081

272732
type: SpeciesReference
stoichiometry: 1.0
species: 144194

144194
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dCMP_C9H12N3O7P

272720
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145531
type: Reaction
reversible: true
product: 292810
product: 292798
reactant: 292774
reactant: 292762
fast: false
name: R_phosphoribosylpyrophosphate_synthetase
notes: GENE_ASSOCIATION: 86 PROTEIN_ASSOCIATION: Prs SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.6.1
product: 292786

292810
type: SpeciesReference
stoichiometry: 1.0
species: 144656

292798
type: SpeciesReference
stoichiometry: 1.0
species: 144334

292774
type: SpeciesReference
stoichiometry: 1.0
species: 144667

292762
type: SpeciesReference
stoichiometry: 1.0
species: 144126

292786
type: SpeciesReference
stoichiometry: 1.0
species: 144103

145364
type: Reaction
product: 286213
product: 286201
reactant: 286189
reactant: 286177
notes: GENE_ASSOCIATION: ( 173 or 175 ) PROTEIN_ASSOCIATION: ( FolD ) or ( Fhs ) SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 3.5.4.9
fast: false
reversible: true
name: R_methenyltetrahydrofolate_cyclohydrolase

286213
type: SpeciesReference
stoichiometry: 1.0
species: 144334

286201
type: SpeciesReference
stoichiometry: 1.0
species: 143913

286189
type: SpeciesReference
stoichiometry: 1.0
species: 144411

144411
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_10_Methenyltetrahydrofolate_C20H20N7O6

286177
type: SpeciesReference
stoichiometry: 1.0
species: 144330

145112
type: Reaction
name: R_fructose_1_phosphate_kinase
product: 276112
reversible: false
reactant: 276100
notes: GENE_ASSOCIATION: 355 PROTEIN_ASSOCIATION: FruK SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 2.7.1.56
product: 276125
reactant: 276088
product: 276137
fast: false

276112
type: SpeciesReference
stoichiometry: 1.0
species: 144081

276100
type: SpeciesReference
stoichiometry: 1.0
species: 144247

144247
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Fructose_1_phosphate_C6H11O9P

276125
type: SpeciesReference
stoichiometry: 1.0
species: 144258

276088
type: SpeciesReference
stoichiometry: 1.0
species: 144126

276137
type: SpeciesReference
stoichiometry: 1.0
species: 144334

144723
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Gly__HOX

144776
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Xanthosine_5__phosphate_C10H11N4O9P

143930
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_meso_2_6_Diaminoheptanedioate_C7H14N2O4

145017
type: Reaction
product: 273612
product: 273600
reactant: 273588
notes: GENE_ASSOCIATION: 224 PROTEIN_ASSOCIATION: IlvD SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_Dihydroxy_acid_dehydratase__2_3_dihydroxy_3_methylpentanoate_

273612
type: SpeciesReference
stoichiometry: 1.0
species: 144330

273600
type: SpeciesReference
stoichiometry: 1.0
species: 143999

143999
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__S__3_Methyl_2_oxopentanoate_C6H9O3

273588
type: SpeciesReference
stoichiometry: 1.0
species: 143925

145262
type: Reaction
reactant: 282036
product: 282060
reversible: false
fast: false
notes: GENE_ASSOCIATION: 231 PROTEIN_ASSOCIATION: HisC SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.6.1.9
product: 282072
name: R_histidinol_phosphate_transaminase
product: 282048
reactant: 282024

282036
type: SpeciesReference
stoichiometry: 1.0
species: 144375

144375
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3__Imidazol_4_yl__2_oxopropyl_phosphate_C6H8N2O5P

282060
type: SpeciesReference
stoichiometry: 1.0
species: 144334

282072
type: SpeciesReference
stoichiometry: 1.0
species: 144352

144352
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Histidinol_phosphate_C6H11N3O4P

282048
type: SpeciesReference
stoichiometry: 1.0
species: 144091

282024
type: SpeciesReference
stoichiometry: 1.0
species: 144300

145595
type: Reaction
product: 295189
product: 295177
reactant: 295165
notes: GENE_ASSOCIATION: 415 PROTEIN_ASSOCIATION: LtaA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.1.2.5
fast: false
reversible: true
name: R_threonine_aldolase

295189
type: SpeciesReference
stoichiometry: 1.0
species: 144303

295177
type: SpeciesReference
stoichiometry: 1.0
species: 144057

295165
type: SpeciesReference
stoichiometry: 1.0
species: 144707

145343
type: Reaction
product: 285414
product: 285402
reactant: 285390
reactant: 285378
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.2.99.10
fast: false
reversible: true
name: R_O_Acetyl_L_homoserine_acetate_lyase__adding_methanethiol_

285414
type: SpeciesReference
stoichiometry: 1.0
species: 144340

285402
type: SpeciesReference
stoichiometry: 1.0
species: 144054

285390
type: SpeciesReference
stoichiometry: 1.0
species: 144332

144332
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Hydrogen_sulfide_HS

285378
type: SpeciesReference
stoichiometry: 1.0
species: 144065

144065
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_O_Acetyl_L_homoserine_C6H11NO4

145603
type: Reaction
product: 295431
name: R_Threonyl_tRNA_synthetase
product: 295407
reactant: 295395
fast: false
reversible: false
reactant: 295383
reactant: 295371
notes: GENE_ASSOCIATION: 197 PROTEIN_ASSOCIATION: ThrS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.3
product: 295419

295431
type: SpeciesReference
stoichiometry: 1.0
species: 144710

144710
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Threonyl_tRNA_Thr__C4H9NO3X

295407
type: SpeciesReference
stoichiometry: 1.0
species: 144103

295395
type: SpeciesReference
stoichiometry: 1.0
species: 144736

295383
type: SpeciesReference
stoichiometry: 1.0
species: 144707

295371
type: SpeciesReference
stoichiometry: 1.0
species: 144126

295419
type: SpeciesReference
stoichiometry: 1.0
species: 144639

145358
type: Reaction
reversible: false
product: 285984
name: R_molybdate_transport_via_ABC_system
fast: false
reactant: 285935
notes: GENE_ASSOCIATION: ( 496 and 497 and 498 ) PROTEIN_ASSOCIATION: ModABC SUBSYSTEM: S_Transport PROTEIN_CLASS:
product: 285972
reactant: 285922
reactant: 285947
product: 285996
product: 285959

285984
type: SpeciesReference
stoichiometry: 1.0
species: 144559

144559
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Molybdate_MoO4

285935
type: SpeciesReference
stoichiometry: 1.0
species: 144330

285972
type: SpeciesReference
stoichiometry: 1.0
species: 144334

285922
type: SpeciesReference
stoichiometry: 1.0
species: 144126

285947
type: SpeciesReference
stoichiometry: 1.0
species: 144561

285996
type: SpeciesReference
stoichiometry: 1.0
species: 144630

285959
type: SpeciesReference
stoichiometry: 1.0
species: 144081

144296
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Glutaminyl_tRNA_Gln__C5H10N2O3X

144964
type: Reaction
product: 271427
product: 271415
reactant: 271403
notes: GENE_ASSOCIATION: 104 PROTEIN_ASSOCIATION: AroC1 SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.2.3.5
fast: false
reversible: false
name: R_chorismate_synthase

271427
type: SpeciesReference
stoichiometry: 1.0
species: 144630

271415
type: SpeciesReference
stoichiometry: 1.0
species: 144145

144145
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Chorismate_C10H8O6

271403
type: SpeciesReference
stoichiometry: 1.0
species: 144014

144014
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_O__1_Carboxyvinyl__3_phosphoshikimate_C10H9O10P

145132
type: Reaction
product: 276982
product: 276970
reactant: 276958
notes: GENE_ASSOCIATION: 354 PROTEIN_ASSOCIATION: Fba SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 4.1.2.13
fast: false
reversible: true
name: R_fructose_bisphosphate_aldolase

276982
type: SpeciesReference
stoichiometry: 1.0
species: 144279

276970
type: SpeciesReference
stoichiometry: 1.0
species: 144210

276958
type: SpeciesReference
stoichiometry: 1.0
species: 144258

144979
type: Reaction
name: R_precorrin_3B_C17_methyltransferase
reversible: false
reactant: 271922
reactant: 271934
fast: false
notes: GENE_ASSOCIATION: 260 PROTEIN_ASSOCIATION: CobQ SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.1.1.131
reactant: 271910
product: 271958
product: 271946

271922
type: SpeciesReference
stoichiometry: 1.0
species: 144169

144169
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_cobalt_precorrin_3_C43H39N4O16Co

271934
type: SpeciesReference
stoichiometry: 1.0
species: 144334

271910
type: SpeciesReference
stoichiometry: 1.0
species: 144101

271958
type: SpeciesReference
stoichiometry: 1.0
species: 144170

144170
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_cobalt_precorrin_4_C44H43CoN4O16

271946
type: SpeciesReference
stoichiometry: 1.0
species: 144086

145549
type: Reaction
product: 293451
product: 293439
reactant: 293427
notes: GENE_ASSOCIATION: ( 307 and 309 ) PROTEIN_ASSOCIATION: RibEH SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.9
fast: false
reversible: false
name: R_riboflavin_synthase

293451
type: SpeciesReference
stoichiometry: 1.0
species: 144672

144672
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Riboflavin_C17H20N4O6

293439
type: SpeciesReference
stoichiometry: 1.0
species: 144034

144034
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_4__1_D_Ribitylamino__5_aminouracil_C9H16N4O6

293427
type: SpeciesReference
stoichiometry: 2.0
species: 144224

144224
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_6_7_Dimethyl_8__1_D_ribityl_lumazine_C13H18N4O6

145511
type: Reaction
reversible: false
reactant: 291944
name: R_prephenate_dehydratase
product: 291980
reactant: 291956
fast: false
product: 291968
product: 291992
notes: GENE_ASSOCIATION: ( 103 or 389 ) PROTEIN_ASSOCIATION: PheA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.2.1.51

291944
type: SpeciesReference
stoichiometry: 1.0
species: 144334

291980
type: SpeciesReference
stoichiometry: 1.0
species: 144330

291956
type: SpeciesReference
stoichiometry: 1.0
species: 144638

144638
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Prephenate_C10H8O6

291968
type: SpeciesReference
stoichiometry: 1.0
species: 144155

291992
type: SpeciesReference
stoichiometry: 1.0
species: 144627

144627
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Phenylpyruvate_C9H7O3

144134
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Cobinamide_C48H72CoN11O8

145172
type: Reaction
product: 278526
reactant: 278502
notes: GENE_ASSOCIATION: 87 PROTEIN_ASSOCIATION: GlyA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.1.2.1
product: 278514
product: 278538
reactant: 278490
fast: false
name: R_glycine_hydroxymethyltransferase
reversible: true

278526
type: SpeciesReference
stoichiometry: 1.0
species: 144330

278502
type: SpeciesReference
stoichiometry: 1.0
species: 144702

278514
type: SpeciesReference
stoichiometry: 1.0
species: 144303

278538
type: SpeciesReference
stoichiometry: 1.0
species: 144554

144554
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_10_Methylenetetrahydrofolate_C20H21N7O6

278490
type: SpeciesReference
stoichiometry: 1.0
species: 144677

145055
type: Reaction
product: 275047
name: R_1_deoxy_D_xylulose_5_phosphate_reductoisomerase
reactant: 275011
reversible: true
fast: false
reactant: 275035
notes: GENE_ASSOCIATION: 58 PROTEIN_ASSOCIATION: Dxr SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
product: 275059
reactant: 275023

275047
type: SpeciesReference
stoichiometry: 1.0
species: 143951

143951
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_C_methyl_D_erythritol_4_phosphate_C5H11O7P

275011
type: SpeciesReference
stoichiometry: 1.0
species: 144240

275035
type: SpeciesReference
stoichiometry: 1.0
species: 144581

275059
type: SpeciesReference
stoichiometry: 1.0
species: 144580

275023
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145589
type: Reaction
product: 294997
product: 294985
reactant: 294973
reactant: 294961
notes: GENE_ASSOCIATION: 365 PROTEIN_ASSOCIATION: Tal SUBSYSTEM: S_Pentose_Phosphate_Pathway PROTEIN_CLASS: 2.2.1.2
fast: false
reversible: true
name: R_transaldolase

294997
type: SpeciesReference
stoichiometry: 1.0
species: 144248

294985
type: SpeciesReference
stoichiometry: 1.0
species: 144242

144242
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Erythrose_4_phosphate_C4H7O7P

294973
type: SpeciesReference
stoichiometry: 1.0
species: 144674

294961
type: SpeciesReference
stoichiometry: 1.0
species: 144279

145460
type: Reaction
product: 290044
reactant: 289972
reactant: 289984
product: 290008
reversible: false
fast: false
notes: GENE_ASSOCIATION: 212 PROTEIN_ASSOCIATION: PanC SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 6.3.2.1
name: R_pantothenate_synthase
product: 290032
product: 290020
reactant: 289996

290044
type: SpeciesReference
stoichiometry: 1.0
species: 144639

289972
type: SpeciesReference
stoichiometry: 1.0
species: 144093

144093
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_beta_Alanine_C3H7NO2

289984
type: SpeciesReference
stoichiometry: 1.0
species: 144126

290008
type: SpeciesReference
stoichiometry: 1.0
species: 144103

290032
type: SpeciesReference
stoichiometry: 1.0
species: 144634

144634
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__R__Pantothenate_C9H16NO5

290020
type: SpeciesReference
stoichiometry: 1.0
species: 144334

289996
type: SpeciesReference
stoichiometry: 1.0
species: 144610

144610
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__R__Pantoate_C6H11O4

144835
type: Reaction
product: 265748
product: 265736
reactant: 265724
reactant: 265712
notes: GENE_ASSOCIATION: 332 PROTEIN_ASSOCIATION: ArgB1 SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.7.2.8
fast: false
reversible: false
name: R_acetylglutamate_kinase

265748
type: SpeciesReference
stoichiometry: 1.0
species: 144081

265736
type: SpeciesReference
stoichiometry: 1.0
species: 144059

265724
type: SpeciesReference
stoichiometry: 1.0
species: 144126

265712
type: SpeciesReference
stoichiometry: 1.0
species: 144063

144063
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N_Acetyl_L_glutamate_C7H9NO5

144749
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Tyrosyl_tRNA_Tyr__C9H11NO3X

144784
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Antimonite_Sb

143918
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_1_Aminopropan_2_ol_C3H10NO

144082
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_ADPglucose_C16H23N5O15P2

145420
type: Reaction
fast: false
name: R_Nucleoside_triphosphate_pyrophosphorylase__atp_
notes: GENE_ASSOCIATION: 409 PROTEIN_ASSOCIATION: MazG SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
product: 288434
product: 288410
reactant: 288398
reactant: 288385
reversible: false
product: 288422

288434
type: SpeciesReference
stoichiometry: 1.0
species: 144639

288410
type: SpeciesReference
stoichiometry: 1.0
species: 144103

288398
type: SpeciesReference
stoichiometry: 1.0
species: 144330

288385
type: SpeciesReference
stoichiometry: 1.0
species: 144126

288422
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145286
type: Reaction
product: 283092
product: 283080
name: R_indolepyruvate_ferredoxin_oxidoreductase__hydroxyphenylpyvurate_
product: 283056
reactant: 283044
reversible: true
reactant: 283032
product: 283068
notes: GENE_ASSOCIATION: ( 269 and 270 ) PROTEIN_ASSOCIATION: IorAB1 SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS:
fast: false
reactant: 283020

283092
type: SpeciesReference
stoichiometry: 1.0
species: 144334

283080
type: SpeciesReference
stoichiometry: 2.0
species: 144259

283056
type: SpeciesReference
stoichiometry: 1.0
species: 144025

144025
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

283044
type: SpeciesReference
stoichiometry: 2.0
species: 144256

283032
type: SpeciesReference
stoichiometry: 1.0
species: 144161

283068
type: SpeciesReference
stoichiometry: 1.0
species: 144155

283020
type: SpeciesReference
stoichiometry: 1.0
species: 143974

143974
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3__4_Hydroxyphenyl_pyruvate_C9H7O4

145369
type: Reaction
product: 286345
reactant: 286333
notes: GENE_ASSOCIATION: 118 PROTEIN_ASSOCIATION: YkrS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 5.3.1.23
fast: false
reversible: true
name: R_5_methylthioribose_1_phosphate_isomerase

286345
type: SpeciesReference
stoichiometry: 1.0
species: 144041

144041
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_Methylthio_5_deoxy_D_ribulose_1_phosphate_C6H11O7PS

286333
type: SpeciesReference
stoichiometry: 1.0
species: 144039

145253
type: Reaction
reactant: 281712
reactant: 281700
fast: false
product: 281736
reversible: false
name: R__3R__3_Hydroxyoctadecanoyl_acyl_carrier_proteinNADP_oxidoreductase
notes: GENE_ASSOCIATION: ( 340 or 189 ) PROTEIN_ASSOCIATION: FabG1 SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.100
reactant: 281724
product: 281748

281712
type: SpeciesReference
stoichiometry: 1.0
species: 144334

281700
type: SpeciesReference
stoichiometry: 1.0
species: 144009

144009
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Oxooctadecanoyl_acp_C18H33O2X

281736
type: SpeciesReference
stoichiometry: 1.0
species: 143993

281724
type: SpeciesReference
stoichiometry: 1.0
species: 144581

281748
type: SpeciesReference
stoichiometry: 1.0
species: 144580

145240
type: Reaction
product: 281240
product: 281228
reactant: 281216
reactant: 281204
notes: GENE_ASSOCIATION: 424 PROTEIN_ASSOCIATION: HisJ SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 3.1.3.15
fast: false
reversible: false
name: R_histidinol_phosphatase

281240
type: SpeciesReference
stoichiometry: 1.0
species: 144630

281228
type: SpeciesReference
stoichiometry: 1.0
species: 144354

144354
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Histidinol_C6H12N3O

281216
type: SpeciesReference
stoichiometry: 1.0
species: 144352

281204
type: SpeciesReference
stoichiometry: 1.0
species: 144330

143991
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__R__3_Hydroxyoctanoyl_acyl_carrier_protein_C8H15O2X

144958
type: Reaction
notes: GENE_ASSOCIATION: 279 PROTEIN_ASSOCIATION: PssA1 SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.7.8.8
product: 271209
product: 271234
name: R_CDPdiacylglycerol_serine_O_phosphatidyltransferase
fast: false
reactant: 271185
reversible: false
product: 271221
reactant: 271197

271209
type: SpeciesReference
stoichiometry: 1.0
species: 144153

271234
type: SpeciesReference
stoichiometry: 1.0
species: 144657

144657
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Phosphatidylserine_C8H11NO10PR2

271185
type: SpeciesReference
stoichiometry: 1.0
species: 144143

144143
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_CDPdiacylglycerol_C14H17N3O15P2R2

271221
type: SpeciesReference
stoichiometry: 1.0
species: 144334

271197
type: SpeciesReference
stoichiometry: 1.0
species: 144677

145651
type: Reaction
reversible: false
product: 297247
product: 297259
reactant: 297223
product: 297235
notes: GENE_ASSOCIATION: ( 155 and 157 and 156 ) PROTEIN_ASSOCIATION: ( ZnuA and ZnuB and ZnuC ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
product: 297271
name: R_zinc_transport_in_via_ABC_system
reactant: 297211
reactant: 297199

297247
type: SpeciesReference
stoichiometry: 1.0
species: 144334

297259
type: SpeciesReference
stoichiometry: 1.0
species: 144630

297223
type: SpeciesReference
stoichiometry: 1.0
species: 144781

144781
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Zinc_Zn

297235
type: SpeciesReference
stoichiometry: 1.0
species: 144081

297271
type: SpeciesReference
stoichiometry: 1.0
species: 144780

144780
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Zinc_Zn

297211
type: SpeciesReference
stoichiometry: 1.0
species: 144330

297199
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145157
type: Reaction
reversible: true
product: 277924
name: R_glycerol_3_phosphate_dehydrogenase__NAD_
product: 277912
fast: false
notes: GENE_ASSOCIATION: 363 PROTEIN_ASSOCIATION: GpsA SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.1.1.94
reactant: 277899
reactant: 277887
product: 277936

277924
type: SpeciesReference
stoichiometry: 1.0
species: 144334

277912
type: SpeciesReference
stoichiometry: 1.0
species: 144210

277899
type: SpeciesReference
stoichiometry: 1.0
species: 144578

277887
type: SpeciesReference
stoichiometry: 1.0
species: 144308

277936
type: SpeciesReference
stoichiometry: 1.0
species: 144579

144077
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

145529
type: Reaction
product: 292750
product: 292738
reactant: 292726
reactant: 292714
notes: GENE_ASSOCIATION: 344 PROTEIN_ASSOCIATION: ProPec SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_proline_transport_inout_via_proton_symport

292750
type: SpeciesReference
stoichiometry: 1.0
species: 144653

292738
type: SpeciesReference
stoichiometry: 1.0
species: 144334

292726
type: SpeciesReference
stoichiometry: 1.0
species: 144654

144654
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_L_Proline_C5H9NO2

292714
type: SpeciesReference
stoichiometry: 1.0
species: 144335

145574
type: Reaction
product: 294395
product: 294383
reactant: 294371
reactant: 294359
notes: GENE_ASSOCIATION: 333 PROTEIN_ASSOCIATION: ArgD SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.6.1.17
fast: false
reversible: true
name: R_succinyldiaminopimelate_transaminase

294395
type: SpeciesReference
stoichiometry: 1.0
species: 144685

144685
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N_Succinyl_2_L_amino_6_oxoheptanedioate_C11H12NO8

294383
type: SpeciesReference
stoichiometry: 1.0
species: 144300

294371
type: SpeciesReference
stoichiometry: 1.0
species: 144683

144683
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N_Succinyl_LL_2_6_diaminoheptanedioate_C11H16N2O7

294359
type: SpeciesReference
stoichiometry: 1.0
species: 144091

145568
type: Reaction
product: 294117
reactant: 294105
notes: GENE_ASSOCIATION: 423 PROTEIN_ASSOCIATION: GmhA SUBSYSTEM: S_Pentose_Phosphate_Pathway PROTEIN_CLASS:
fast: false
reversible: true
name: R_sedoheptulose_7_phosphate_isomerase

294117
type: SpeciesReference
stoichiometry: 1.0
species: 144315

294105
type: SpeciesReference
stoichiometry: 1.0
species: 144674

145484
type: Reaction
product: 290913
reactant: 290889
product: 290901
reactant: 290864
notes: GENE_ASSOCIATION: 59 PROTEIN_ASSOCIATION: CdsA SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.7.7.41
name: R_phosphatidate_cytidylyltransferase
fast: false
reactant: 290876
reversible: false

290913
type: SpeciesReference
stoichiometry: 1.0
species: 144639

290889
type: SpeciesReference
stoichiometry: 1.0
species: 144334

290901
type: SpeciesReference
stoichiometry: 1.0
species: 144143

290864
type: SpeciesReference
stoichiometry: 1.0
species: 143914

143914
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_1_2_Diacyl_sn_glycerol_3_phosphate_C5H5O8PR2

290876
type: SpeciesReference
stoichiometry: 1.0
species: 144174

144719
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Cys__HOX

145406
type: Reaction
reactant: 287862
reactant: 287886
notes: GENE_ASSOCIATION: 1 PROTEIN_ASSOCIATION: NadD SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.7.7.18
reversible: true
product: 287910
product: 287898
fast: false
name: R_nicotinate_nucleotide_adenylyltransferase
reactant: 287874

287862
type: SpeciesReference
stoichiometry: 1.0
species: 144126

287886
type: SpeciesReference
stoichiometry: 1.0
species: 144589

287910
type: SpeciesReference
stoichiometry: 1.0
species: 144639

287898
type: SpeciesReference
stoichiometry: 1.0
species: 144227

144227
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Deamino_NAD_C21H24N6O15P2

287874
type: SpeciesReference
stoichiometry: 1.0
species: 144334

144892
type: Reaction
product: 267881
product: 267869
reactant: 267857
reactant: 267845
notes: GENE_ASSOCIATION: 87 PROTEIN_ASSOCIATION: GlyA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_alanine_transaminase

267881
type: SpeciesReference
stoichiometry: 1.0
species: 144664

267869
type: SpeciesReference
stoichiometry: 1.0
species: 144662

144662
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Pyridoxamine_5__phosphate_C8H11N2O5P

267857
type: SpeciesReference
stoichiometry: 1.0
species: 144663

267845
type: SpeciesReference
stoichiometry: 1.0
species: 144095

145400
type: Reaction
product: 287584
product: 287572
reactant: 287560
reactant: 287548
notes: GENE_ASSOCIATION: 291 PROTEIN_ASSOCIATION: AmtB SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: false
name: R_ammonium_transport_out_via_K_antiport

287584
type: SpeciesReference
stoichiometry: 1.0
species: 144386

287572
type: SpeciesReference
stoichiometry: 1.0
species: 144582

287560
type: SpeciesReference
stoichiometry: 1.0
species: 144583

144583
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Ammonium_H4N

287548
type: SpeciesReference
stoichiometry: 1.0
species: 144384

144384
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_K_K

144090
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_amino_1__5_phospho_D_ribosyl_imidazole_C8H12N3O7P

144800
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_L_Glutamine_C5H10N2O3

144173
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Coproporphyrinogen_III_C36H40N4O8

143961
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Octaprenyl3_methyl_6_methoxy__1_4_benzoquinol_C48H74O3

145637
type: Reaction
product: 296752
product: 296740
reactant: 296728
reactant: 296716
notes: GENE_ASSOCIATION: 313 PROTEIN_ASSOCIATION: Upp2 SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.4.2.9
fast: false
reversible: false
name: R_uracil_phosphoribosyltransferase

296752
type: SpeciesReference
stoichiometry: 1.0
species: 144765

296740
type: SpeciesReference
stoichiometry: 1.0
species: 144639

296728
type: SpeciesReference
stoichiometry: 1.0
species: 144768

296716
type: SpeciesReference
stoichiometry: 1.0
species: 144656

145630
type: Reaction
product: 296536
product: 296524
reactant: 296512
reactant: 296500
notes: GENE_ASSOCIATION: 60 PROTEIN_ASSOCIATION: UppS SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.31
fast: false
reversible: false
name: R_undecaprenyl_diphosphate_synthase

296536
type: SpeciesReference
stoichiometry: 1.0
species: 144760

144760
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Undecaprenyl_diphosphate_C55H89O7P2

296524
type: SpeciesReference
stoichiometry: 1.0
species: 144639

296512
type: SpeciesReference
stoichiometry: 1.0
species: 144380

296500
type: SpeciesReference
stoichiometry: 1.0
species: 144203

144203
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_all_trans_Decaprenyl_diphosphate_C50H81O7P2

144788
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Cob_I_alamin_C62H88CoN13O14P

145631
type: Reaction
product: 296560
reactant: 296548
notes: GENE_ASSOCIATION: ( 476 or 346 or 475 or 477 ) PROTEIN_ASSOCIATION: GalE SUBSYSTEM: S_Carbohydrate_Metabolism PROTEIN_CLASS: 5.1.3.2
fast: false
reversible: true
name: R_UDPglucose_4_epimerase

296560
type: SpeciesReference
stoichiometry: 1.0
species: 144764

144764
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_UDPgalactose_C15H22N2O17P2

296548
type: SpeciesReference
stoichiometry: 1.0
species: 144763

144763
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_UDPglucose_C15H22N2O17P2

145645
type: Reaction
product: 297042
product: 297054
reactant: 297006
name: R_L_valine_transport_via_ABC_system
fast: false
product: 297030
reactant: 296982
reversible: false
product: 297018
notes: GENE_ASSOCIATION: ( 261 or ( 263 and 264 and 265 and 266 and 267 ) ) PROTEIN_ASSOCIATION: ( BraB ) or ( AzlCD ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
reactant: 296994

297042
type: SpeciesReference
stoichiometry: 1.0
species: 144630

297054
type: SpeciesReference
stoichiometry: 1.0
species: 144772

297006
type: SpeciesReference
stoichiometry: 1.0
species: 144773

144773
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_L_Valine_C5H11NO2

297030
type: SpeciesReference
stoichiometry: 1.0
species: 144334

296982
type: SpeciesReference
stoichiometry: 1.0
species: 144126

297018
type: SpeciesReference
stoichiometry: 1.0
species: 144081

296994
type: SpeciesReference
stoichiometry: 1.0
species: 144330

144338
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Homocitrate_C7H7O7

145183
type: Reaction
product: 278984
product: 278972
reactant: 278960
reactant: 278948
notes: GENE_ASSOCIATION: 341 PROTEIN_ASSOCIATION: ProB SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.7.2.11
fast: false
reversible: false
name: R_glutamate_5_kinase

278984
type: SpeciesReference
stoichiometry: 1.0
species: 144298

144298
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Glutamate_5_phosphate_C5H8NO7P

278972
type: SpeciesReference
stoichiometry: 1.0
species: 144081

278960
type: SpeciesReference
stoichiometry: 1.0
species: 144300

278948
type: SpeciesReference
stoichiometry: 1.0
species: 144126

144626
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_O_Phospho_L_homoserine_C4H8NO6P

144661
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Pantetheine_C11H22N2O4S

144878
type: Reaction
notes: GENE_ASSOCIATION: 405 PROTEIN_ASSOCIATION: ArgC SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.2.1.38
product: 267411
reactant: 267362
fast: false
reversible: true
product: 267399
name: R_N_acetyl_g_glutamyl_phosphate_reductase
reactant: 267375
reactant: 267387
product: 267423

267411
type: SpeciesReference
stoichiometry: 1.0
species: 144334

267362
type: SpeciesReference
stoichiometry: 1.0
species: 144061

144061
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N_Acetyl_L_glutamate_5_semialdehyde_C7H10NO4

267399
type: SpeciesReference
stoichiometry: 1.0
species: 144059

267375
type: SpeciesReference
stoichiometry: 1.0
species: 144580

267387
type: SpeciesReference
stoichiometry: 1.0
species: 144630

267423
type: SpeciesReference
stoichiometry: 1.0
species: 144581

144006
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Oxoicosanoyl_acyl_carrier_protein_C20H37O2X

144826
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Thiosulfate_O3S2

145463
type: Reaction
fast: false
product: 290177
reactant: 290153
reversible: false
notes: GENE_ASSOCIATION: 183 PROTEIN_ASSOCIATION: PdhAB SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 1.2.1.51
product: 290201
reactant: 290165
name: R_pyruvate_dehydrogenase
product: 290189
reactant: 290141

290177
type: SpeciesReference
stoichiometry: 1.0
species: 144058

290153
type: SpeciesReference
stoichiometry: 1.0
species: 144578

290201
type: SpeciesReference
stoichiometry: 1.0
species: 144579

290165
type: SpeciesReference
stoichiometry: 1.0
species: 144664

290189
type: SpeciesReference
stoichiometry: 1.0
species: 144155

290141
type: SpeciesReference
stoichiometry: 1.0
species: 144161

145616
type: Reaction
reactant: 295935
reactant: 295959
name: R_thioredoxin_reductase__NADPH_
fast: false
product: 295983
notes: GENE_ASSOCIATION: 126 PROTEIN_ASSOCIATION: TrxB SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.8.1.9
reactant: 295947
reversible: false
product: 295971

295935
type: SpeciesReference
stoichiometry: 1.0
species: 144334

295959
type: SpeciesReference
stoichiometry: 1.0
species: 144712

295983
type: SpeciesReference
stoichiometry: 1.0
species: 144714

295947
type: SpeciesReference
stoichiometry: 1.0
species: 144581

295971
type: SpeciesReference
stoichiometry: 1.0
species: 144580

144901
type: Reaction
reversible: false
product: 268317
name: R_4_amino_2_methyl_5_phosphomethylpyrimidine_synthetase
product: 268293
reactant: 268281
notes: GENE_ASSOCIATION: 201 PROTEIN_ASSOCIATION: ThiC SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
product: 268305
reactant: 268269
fast: false

268317
type: SpeciesReference
stoichiometry: 4.0
species: 144334

268293
type: SpeciesReference
stoichiometry: 1.0
species: 144021

268281
type: SpeciesReference
stoichiometry: 1.0
species: 144330

268305
type: SpeciesReference
stoichiometry: 2.0
species: 144270

268269
type: SpeciesReference
stoichiometry: 1.0
species: 144090

144569
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Menaquinone_8_C51H72O2

144941
type: Reaction
product: 269830
product: 269818
reactant: 269806
reactant: 269793
notes: GENE_ASSOCIATION: 233 PROTEIN_ASSOCIATION: HisG SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.4.2.17
fast: false
reversible: false
name: R_ATP_phosphoribosyltransferase

269830
type: SpeciesReference
stoichiometry: 1.0
species: 144648

144648
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

269818
type: SpeciesReference
stoichiometry: 1.0
species: 144639

269806
type: SpeciesReference
stoichiometry: 1.0
species: 144656

269793
type: SpeciesReference
stoichiometry: 1.0
species: 144126

144399
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Lipoylprotein_S2X

145024
type: Reaction
product: 273878
reversible: true
reactant: 273830
product: 273866
reactant: 273854
notes: GENE_ASSOCIATION: 214 PROTEIN_ASSOCIATION: DfrA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 1.5.1.3
name: R_dihydrofolate_reductase
fast: false
reactant: 273842

273878
type: SpeciesReference
stoichiometry: 1.0
species: 144702

273830
type: SpeciesReference
stoichiometry: 1.0
species: 144268

144268
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Folate_C19H18N7O6

273866
type: SpeciesReference
stoichiometry: 2.0
species: 144580

273854
type: SpeciesReference
stoichiometry: 2.0
species: 144581

273842
type: SpeciesReference
stoichiometry: 1.0
species: 144334

143965
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Glycerate_2_phosphate_C3H4O7P

145064
type: Reaction
product: 275301
reactant: 275289
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Arsenate_exchange

275301
type: SpeciesReference
stoichiometry: 1.0
species: 144786

144786
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Arsenate_AsHO4

275289
type: SpeciesReference
stoichiometry: 1.0
species: 144117

144117
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Arsenate_AsHO4

145070
type: Reaction
product: 275397
reactant: 275385
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Chloride_exchange

275397
type: SpeciesReference
stoichiometry: 1.0
species: 144791

275385
type: SpeciesReference
stoichiometry: 1.0
species: 144151

144151
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Chloride_Cl

144275
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Fructose_C6H12O6

145489
type: Reaction
name: R_phosphate_transport_via_ABC_system
reactant: 291058
reversible: false
fast: false
product: 291082
reactant: 291070
product: 291094
reactant: 291046
product: 291106
notes: GENE_ASSOCIATION: ( 31 and 32 and 33 and 34 ) PROTEIN_ASSOCIATION: PstABCS SUBSYSTEM: S_Transport PROTEIN_CLASS:

291058
type: SpeciesReference
stoichiometry: 1.0
species: 144330

291082
type: SpeciesReference
stoichiometry: 1.0
species: 144081

291070
type: SpeciesReference
stoichiometry: 1.0
species: 144631

144631
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Phosphate_HO4P

291094
type: SpeciesReference
stoichiometry: 1.0
species: 144334

291046
type: SpeciesReference
stoichiometry: 1.0
species: 144126

291106
type: SpeciesReference
stoichiometry: 2.0
species: 144630

145313
type: Reaction
name: R_L_leucine_transport_via_ABC_system
product: 284194
fast: false
reactant: 284157
notes: GENE_ASSOCIATION: ( 261 or ( 263 and 264 and 265 and 266 and 267 ) ) PROTEIN_ASSOCIATION: ( BraB ) or ( AzlCD ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
product: 284206
reactant: 284169
reactant: 284145
product: 284219
product: 284182
reversible: false

284194
type: SpeciesReference
stoichiometry: 1.0
species: 144334

284157
type: SpeciesReference
stoichiometry: 1.0
species: 144330

284206
type: SpeciesReference
stoichiometry: 1.0
species: 144391

284169
type: SpeciesReference
stoichiometry: 1.0
species: 144392

144392
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_L_Leucine_C6H13NO2

284145
type: SpeciesReference
stoichiometry: 1.0
species: 144126

284219
type: SpeciesReference
stoichiometry: 1.0
species: 144630

284182
type: SpeciesReference
stoichiometry: 1.0
species: 144081

144965
type: Reaction
fast: false
reactant: 271451
product: 271500
reactant: 271439
product: 271488
reversible: true
reactant: 271476
reactant: 271463
notes: GENE_ASSOCIATION: 216 PROTEIN_ASSOCIATION: CimA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.3.1
name: R__R__citramalate_synthase

271451
type: SpeciesReference
stoichiometry: 1.0
species: 144334

271500
type: SpeciesReference
stoichiometry: 1.0
species: 144161

271439
type: SpeciesReference
stoichiometry: 1.0
species: 144058

271488
type: SpeciesReference
stoichiometry: 1.0
species: 144150

144150
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__3R__citramalate_C5H8O5

271476
type: SpeciesReference
stoichiometry: 1.0
species: 144664

271463
type: SpeciesReference
stoichiometry: 1.0
species: 144330

144045
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_Oxo_4_5_dihydrofuran_2_acetate_C6H5O4

145504
type: Reaction
product: 291617
product: 291605
reactant: 291593
reactant: 291581
notes: GENE_ASSOCIATION: 84 PROTEIN_ASSOCIATION: Dfp SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 4.1.1.36
fast: false
reversible: false
name: R_phosphopantothenoylcysteine_decarboxylase

291617
type: SpeciesReference
stoichiometry: 1.0
species: 144608

291605
type: SpeciesReference
stoichiometry: 1.0
species: 144155

291593
type: SpeciesReference
stoichiometry: 1.0
species: 144334

291581
type: SpeciesReference
stoichiometry: 1.0
species: 144033

144033
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N___R__4_Phosphopantothenoyl__L_cysteine_C12H20N2O9PS

145043
type: Reaction
product: 274589
product: 274601
reactant: 274553
notes: GENE_ASSOCIATION: 353 PROTEIN_ASSOCIATION: LytB SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reactant: 274541
name: R_1_hydroxy_2_methyl_2__E__butenyl_4_diphosphate_reductase__dmpp_
reversible: false
reactant: 274565
product: 274577

274589
type: SpeciesReference
stoichiometry: 1.0
species: 144330

274601
type: SpeciesReference
stoichiometry: 1.0
species: 144578

274553
type: SpeciesReference
stoichiometry: 1.0
species: 144327

144327
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_1_hydroxy_2_methyl_2__E__butenyl_4_diphosphate_C5H9O8P2

274541
type: SpeciesReference
stoichiometry: 1.0
species: 144334

274565
type: SpeciesReference
stoichiometry: 1.0
species: 144579

274577
type: SpeciesReference
stoichiometry: 1.0
species: 144226

144226
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Dimethylallyl_diphosphate_C5H9O7P2

145088
type: Reaction
product: 275686
reactant: 275674
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Hexachlorobenzene_exchange

275686
type: SpeciesReference
stoichiometry: 1.0
species: 144807

144807
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Hexachlorobenzene_C6Cl6

275674
type: SpeciesReference
stoichiometry: 1.0
species: 144336

144336
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Hexachlorobenzene_C6Cl6

145376
type: Reaction
product: 286647
notes: GENE_ASSOCIATION: ( ( 35 and 36 and 37 and 38 ) or ( 249 and 250 and 251 and 252 and 253 and 254 and 255 and 256 and 257 and 258 and 259 ) or 149 or ( 241 and 242 and 243 ) or 91 or ( 185 and 186 and 187 ) or ( 391 and 392 and 393 and 394 and 395 and 396 ) ) PROTEIN_ASSOCIATION: Nadhd5 SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.6.5.3
reactant: 286610
product: 286634
reactant: 286598
reversible: false
reactant: 286586
name: R_NADH_dehydrogenase__demethylmenaquinone_8__28_protons_
product: 286622
fast: false

286647
type: SpeciesReference
stoichiometry: 2.8
species: 144335

286610
type: SpeciesReference
stoichiometry: 1.0
species: 144579

286634
type: SpeciesReference
stoichiometry: 1.0
species: 144578

286598
type: SpeciesReference
stoichiometry: 3.8
species: 144334

286586
type: SpeciesReference
stoichiometry: 1.0
species: 143942

286622
type: SpeciesReference
stoichiometry: 1.0
species: 143943

144794
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Co2_Co

145370
type: Reaction
product: 286369
reactant: 286357
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_nitrogen_transport_diffusion

286369
type: SpeciesReference
stoichiometry: 1.0
species: 144576

144576
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_N2_N2

286357
type: SpeciesReference
stoichiometry: 1.0
species: 144575

144575
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N2_N2

145003
type: Reaction
product: 273153
reactant: 273141
notes: GENE_ASSOCIATION: 191 PROTEIN_ASSOCIATION: DapF SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 5.1.1.7
fast: false
reversible: true
name: R_diaminopimelate_epimerase

273153
type: SpeciesReference
stoichiometry: 1.0
species: 143930

273141
type: SpeciesReference
stoichiometry: 1.0
species: 143929

143929
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_LL_2_6_Diaminoheptanedioate_C7H14N2O4

145280
type: Reaction
product: 282758
product: 282746
reactant: 282734
notes: GENE_ASSOCIATION: 369 PROTEIN_ASSOCIATION: PurH SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 3.5.4.10
fast: false
reversible: false
name: R_IMP_cyclohydrolase

282758
type: SpeciesReference
stoichiometry: 1.0
species: 144376

144376
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_IMP_C10H11N4O8P

282746
type: SpeciesReference
stoichiometry: 1.0
species: 144330

282734
type: SpeciesReference
stoichiometry: 1.0
species: 144272

145295
type: Reaction
product: 283409
product: 283397
reactant: 283385
notes: GENE_ASSOCIATION: ( 93 and 94 and 218 and 219 ) PROTEIN_ASSOCIATION: LeuCD SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.2.1.33
fast: false
reversible: true
name: R_3_isopropylmalate_dehydratase

283409
type: SpeciesReference
stoichiometry: 1.0
species: 144330

283397
type: SpeciesReference
stoichiometry: 1.0
species: 143945

143945
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Isopropylmaleate_C7H8O4

283385
type: SpeciesReference
stoichiometry: 1.0
species: 143977

145330
type: Reaction
fast: false
reversible: false
name: R_Decanoyl_acyl_carrier_proteinmalonyl_acyl_carrier_protein_C_acyltransferase
product: 284847
reactant: 284811
reactant: 284799
product: 284835
product: 284859
notes: GENE_ASSOCIATION: 274 PROTEIN_ASSOCIATION: FabF SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.41
reactant: 284823

284847
type: SpeciesReference
stoichiometry: 1.0
species: 144050

284811
type: SpeciesReference
stoichiometry: 1.0
species: 144334

284799
type: SpeciesReference
stoichiometry: 1.0
species: 144202

144202
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Decanoyl_acyl_carrier_protein_C10H19OX

284835
type: SpeciesReference
stoichiometry: 1.0
species: 144001

284859
type: SpeciesReference
stoichiometry: 1.0
species: 144155

284823
type: SpeciesReference
stoichiometry: 1.0
species: 144403

145241
type: Reaction
product: 281289
name: R_Histidyl_tRNA_synthetase
fast: false
reactant: 281264
product: 281301
reversible: false
reactant: 281252
reactant: 281277
product: 281313
notes: GENE_ASSOCIATION: ( 3 or 234 ) PROTEIN_ASSOCIATION: ( HisS ) or ( HisS2 ) SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.21

281289
type: SpeciesReference
stoichiometry: 1.0
species: 144103

281264
type: SpeciesReference
stoichiometry: 1.0
species: 144351

281301
type: SpeciesReference
stoichiometry: 1.0
species: 144355

281252
type: SpeciesReference
stoichiometry: 1.0
species: 144126

281277
type: SpeciesReference
stoichiometry: 1.0
species: 144725

144725
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_His__HOX

281313
type: SpeciesReference
stoichiometry: 1.0
species: 144639

144018
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_4_amino_4_deoxychorismate_C10H10NO5

145561
type: Reaction
reactant: 293874
notes: GENE_ASSOCIATION: ( 52 or 364 ) PROTEIN_ASSOCIATION: NrdD SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 1.17.4.2
product: 293922
product: 293910
fast: false
reversible: false
reactant: 293886
name: R_ribonucleoside_triphosphate_reductase__GTP_
product: 293898

293874
type: SpeciesReference
stoichiometry: 1.0
species: 144322

293922
type: SpeciesReference
stoichiometry: 1.0
species: 144712

293910
type: SpeciesReference
stoichiometry: 1.0
species: 144330

293886
type: SpeciesReference
stoichiometry: 1.0
species: 144714

293898
type: SpeciesReference
stoichiometry: 1.0
species: 144208

145523
type: Reaction
name: R_phosphoribosyl_ATP_pyrophosphatase
reactant: 292462
fast: false
reactant: 292450
reversible: false
product: 292474
notes: GENE_ASSOCIATION: 347 PROTEIN_ASSOCIATION: HisI_N SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 3.6.1.31
product: 292486
product: 292498

292462
type: SpeciesReference
stoichiometry: 1.0
species: 144648

292450
type: SpeciesReference
stoichiometry: 1.0
species: 144330

292474
type: SpeciesReference
stoichiometry: 1.0
species: 144334

292486
type: SpeciesReference
stoichiometry: 1.0
species: 144639

292498
type: SpeciesReference
stoichiometry: 1.0
species: 144647

144990
type: Reaction
reactant: 272612
fast: false
reactant: 272600
product: 272660
reversible: false
product: 272648
reactant: 272624
name: R_Cysteinyl_tRNA_synthetase
product: 272636
notes: GENE_ASSOCIATION: 18 PROTEIN_ASSOCIATION: CysS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.16

272612
type: SpeciesReference
stoichiometry: 1.0
species: 144178

272600
type: SpeciesReference
stoichiometry: 1.0
species: 144126

272660
type: SpeciesReference
stoichiometry: 1.0
species: 144639

272648
type: SpeciesReference
stoichiometry: 1.0
species: 144181

144181
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Cysteinyl_tRNA_Cys__C3H7NO2SX

272624
type: SpeciesReference
stoichiometry: 1.0
species: 144719

272636
type: SpeciesReference
stoichiometry: 1.0
species: 144103

145201
type: Reaction
reactant: 279803
notes: GENE_ASSOCIATION: 319 PROTEIN_ASSOCIATION: FolE SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 3.5.4.16
reactant: 279816
product: 279828
fast: false
reversible: false
name: R_GTP_cyclohydrolase_I
product: 279852
product: 279840

279803
type: SpeciesReference
stoichiometry: 1.0
species: 144322

279816
type: SpeciesReference
stoichiometry: 1.0
species: 144330

279828
type: SpeciesReference
stoichiometry: 1.0
species: 144087

144087
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Amino_4_hydroxy_6__erythro_1_2_3_trihydroxypropyl_dihydropteridine_triphosphate_C9H12N5O13P3

279852
type: SpeciesReference
stoichiometry: 1.0
species: 144334

279840
type: SpeciesReference
stoichiometry: 1.0
species: 144270

145190
type: Reaction
fast: false
reactant: 279333
reactant: 279321
reversible: false
product: 279381
product: 279369
product: 279357
reactant: 279345
name: R_Glutamyl_tRNA_synthetase
notes: GENE_ASSOCIATION: 357 PROTEIN_ASSOCIATION: GltX SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.17

279333
type: SpeciesReference
stoichiometry: 1.0
species: 144300

279321
type: SpeciesReference
stoichiometry: 1.0
species: 144126

279381
type: SpeciesReference
stoichiometry: 1.0
species: 144639

279369
type: SpeciesReference
stoichiometry: 1.0
species: 144302

144302
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Glutamyl_tRNA_Glu__C5H8NO4X

279357
type: SpeciesReference
stoichiometry: 1.0
species: 144103

279345
type: SpeciesReference
stoichiometry: 1.0
species: 144722

144722
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA__Glu__HOX

144699
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Tetradecenoyl_ACP__n_C141ACP__C14H25OX

144681
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Shikimate_5_phosphate_C7H8O8P

145067
type: Reaction
product: 275349
reactant: 275337
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Cob_I_alamin_exchange

275349
type: SpeciesReference
stoichiometry: 1.0
species: 144788

275337
type: SpeciesReference
stoichiometry: 1.0
species: 144137

145202
type: Reaction
product: 279924
reactant: 279864
product: 279900
fast: false
reactant: 279876
product: 279888
notes: GENE_ASSOCIATION: 308 PROTEIN_ASSOCIATION: RibA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 3.5.4.25
reversible: false
product: 279912
name: R_GTP_cyclohydrolase_II

279924
type: SpeciesReference
stoichiometry: 1.0
species: 144639

279864
type: SpeciesReference
stoichiometry: 1.0
species: 144322

279900
type: SpeciesReference
stoichiometry: 1.0
species: 144270

279876
type: SpeciesReference
stoichiometry: 3.0
species: 144330

279888
type: SpeciesReference
stoichiometry: 1.0
species: 143927

143927
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_5_Diamino_6_hydroxy_4__5__phosphoribosylamino__pyrimidine_C9H14N5O8P

279912
type: SpeciesReference
stoichiometry: 2.0
species: 144334

145576
type: Reaction
product: 294444
product: 294432
reactant: 294420
reactant: 294407
notes: GENE_ASSOCIATION: 398 PROTEIN_ASSOCIATION: CysE SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.3.1.30
fast: false
reversible: true
name: R_serine_O_acetyltransferase

294444
type: SpeciesReference
stoichiometry: 1.0
species: 144161

294432
type: SpeciesReference
stoichiometry: 1.0
species: 144067

144067
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_O_Acetyl_L_serine_C5H9NO4

294420
type: SpeciesReference
stoichiometry: 1.0
species: 144677

294407
type: SpeciesReference
stoichiometry: 1.0
species: 144058

144711
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Thymidine_C10H14N2O5

144729
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Lys__HOX

144767
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Uroporphyrinogen_III_C40H36N4O16

144314
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Glycyl_tRNA_Gly__C2H5NO2X

145433
type: Reaction
name: R_Octanoyl_acyl_carrier_proteinmalonyl_CoA_C_acyltransferase
reactant: 288929
reactant: 288941
product: 288978
reactant: 288953
product: 288966
fast: false
notes: GENE_ASSOCIATION: 338 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.3.1.10
reversible: false

288929
type: SpeciesReference
stoichiometry: 1.0
species: 143973

288941
type: SpeciesReference
stoichiometry: 1.0
species: 144334

288978
type: SpeciesReference
stoichiometry: 1.0
species: 144600

144600
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Octanoyl_acyl_carrier_protein_C8H15OX

288953
type: SpeciesReference
stoichiometry: 1.0
species: 144579

288966
type: SpeciesReference
stoichiometry: 1.0
species: 144578

145432
type: Reaction
name: R_Octadecanoyl_acyl_carrier_proteinmalonyl_CoA__C_acyltransferase
reactant: 288881
product: 288905
reversible: false
notes: GENE_ASSOCIATION: 338 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.3.1.10
fast: false
product: 288917
reactant: 288869
reactant: 288893

288881
type: SpeciesReference
stoichiometry: 1.0
species: 144334

288905
type: SpeciesReference
stoichiometry: 1.0
species: 144578

288917
type: SpeciesReference
stoichiometry: 1.0
species: 144597

144597
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Octadecanoyl_ACP__n_C180ACP__C18H35OX

288869
type: SpeciesReference
stoichiometry: 1.0
species: 143971

143971
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_trans_Octadec_2_enoyl_acyl_carrier_protein_C18H33OX

288893
type: SpeciesReference
stoichiometry: 1.0
species: 144579

145316
type: Reaction
product: 284303
reactant: 284291
notes: GENE_ASSOCIATION: ( 153 or 48 ) PROTEIN_ASSOCIATION: KamA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 5.4.3.2
fast: false
reversible: true
name: R_lysine_2_3_aminomutase

284303
type: SpeciesReference
stoichiometry: 1.0
species: 143975

143975
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__3S__3_6_Diaminohexanoate_C6H15N2O2

284291
type: SpeciesReference
stoichiometry: 1.0
species: 144400

145029
type: Reaction
product: 274083
fast: false
reversible: false
notes: GENE_ASSOCIATION: 73 PROTEIN_ASSOCIATION: MenA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
reactant: 274047
name: R_1_4_dihydroxy_2_naphthoate_octaprenyltransferase
reactant: 274035
reactant: 274059
product: 274071
product: 274096
product: 274108

274083
type: SpeciesReference
stoichiometry: 1.0
species: 144155

274047
type: SpeciesReference
stoichiometry: 1.0
species: 144578

274035
type: SpeciesReference
stoichiometry: 1.0
species: 144214

274059
type: SpeciesReference
stoichiometry: 1.0
species: 144601

144601
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_all_trans_Octaprenyl_diphosphate_C40H65O7P2

274071
type: SpeciesReference
stoichiometry: 1.0
species: 143942

274096
type: SpeciesReference
stoichiometry: 1.0
species: 144579

274108
type: SpeciesReference
stoichiometry: 1.0
species: 144639

144640
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Propanol_C3H8O

145274
type: Reaction
name: R_indole_3_glycerol_phosphate_synthase
product: 282493
reversible: false
reactant: 282481
product: 282505
fast: false
reactant: 282469
notes: GENE_ASSOCIATION: 376 PROTEIN_ASSOCIATION: TrpC SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.1.1.48
product: 282517

282493
type: SpeciesReference
stoichiometry: 1.0
species: 143997

282481
type: SpeciesReference
stoichiometry: 1.0
species: 144334

282505
type: SpeciesReference
stoichiometry: 1.0
species: 144155

282469
type: SpeciesReference
stoichiometry: 1.0
species: 143938

282517
type: SpeciesReference
stoichiometry: 1.0
species: 144330

145355
type: Reaction
product: 285825
reactant: 285813
reactant: 285801
notes: GENE_ASSOCIATION: ( 93 and 94 and 218 and 219 ) PROTEIN_ASSOCIATION: Aco3 SUBSYSTEM: S_Citrate_Cycle__TCA_ PROTEIN_CLASS: 4.2.1.99
fast: false
reversible: false
name: R_2_methylisocitrate_hydratase

285825
type: SpeciesReference
stoichiometry: 1.0
species: 144553

144553
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Methylisocitrate_C7H7O7

285813
type: SpeciesReference
stoichiometry: 1.0
species: 144330

285801
type: SpeciesReference
stoichiometry: 1.0
species: 143950

143950
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_cis_2_Methylaconitate_C7H5O6

144976
type: Reaction
product: 271814
name: R_cobalamin_5__phosphate_synthase
reactant: 271777
product: 271802
reactant: 271789
reversible: true
product: 271826
fast: false
notes: GENE_ASSOCIATION: 167 PROTEIN_ASSOCIATION: CobS SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:

271814
type: SpeciesReference
stoichiometry: 1.0
species: 144316

144316
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_GMP_C10H12N5O8P

271777
type: SpeciesReference
stoichiometry: 1.0
species: 144077

271802
type: SpeciesReference
stoichiometry: 1.0
species: 144079

271789
type: SpeciesReference
stoichiometry: 1.0
species: 144668

144668
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N1__alpha_D_ribosyl__5_6_dimethylbenzimidazole_C14H18N2O4

271826
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145144
type: Reaction
reversible: true
reactant: 277403
product: 277428
name: R_ferredoxin_NADP_reductase
notes: GENE_ASSOCIATION: 11 PROTEIN_ASSOCIATION: P_1.18.1.2 SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.18.1.2
fast: false
product: 277440
reactant: 277391
reactant: 277416

277403
type: SpeciesReference
stoichiometry: 1.0
species: 144334

277428
type: SpeciesReference
stoichiometry: 2.0
species: 144256

277440
type: SpeciesReference
stoichiometry: 1.0
species: 144581

277391
type: SpeciesReference
stoichiometry: 2.0
species: 144259

277416
type: SpeciesReference
stoichiometry: 1.0
species: 144580

145547
type: Reaction
reversible: false
product: 293391
reactant: 293379
name: R_riboflavin_synthase
product: 293415
fast: false
notes: GENE_ASSOCIATION: ( 307 and 309 ) PROTEIN_ASSOCIATION: RibEH SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.9
product: 293403
reactant: 293367

293391
type: SpeciesReference
stoichiometry: 1.0
species: 144224

293379
type: SpeciesReference
stoichiometry: 1.0
species: 144188

293415
type: SpeciesReference
stoichiometry: 1.0
species: 144630

293403
type: SpeciesReference
stoichiometry: 2.0
species: 144330

293367
type: SpeciesReference
stoichiometry: 1.0
species: 144034

144383
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Isovaleryl_CoA_C26H40N7O17P3S

145586
type: Reaction
product: 294841
reactant: 294817
reversible: true
fast: false
reactant: 294829
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.8.1.2
name: R_sulfite_reductase__NADPH2_
product: 294865
product: 294853
reactant: 294805

294841
type: SpeciesReference
stoichiometry: 4.0
species: 144334

294817
type: SpeciesReference
stoichiometry: 1.0
species: 144332

294829
type: SpeciesReference
stoichiometry: 3.0
species: 144580

294865
type: SpeciesReference
stoichiometry: 1.0
species: 144686

144686
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Sulfite_O3S

294853
type: SpeciesReference
stoichiometry: 3.0
species: 144581

294805
type: SpeciesReference
stoichiometry: 3.0
species: 144330

145227
type: Reaction
product: 280769
product: 280757
reactant: 280745
reactant: 280733
notes: GENE_ASSOCIATION: 67 PROTEIN_ASSOCIATION: HepT SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.5.1.30
fast: false
reversible: false
name: R_trans_hexaprenyltranstransferase

280769
type: SpeciesReference
stoichiometry: 1.0
species: 144639

280757
type: SpeciesReference
stoichiometry: 1.0
species: 144344

144344
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_all_trans_Heptaprenyl_diphosphate_C35H57O7P2

280745
type: SpeciesReference
stoichiometry: 1.0
species: 144380

280733
type: SpeciesReference
stoichiometry: 1.0
species: 144347

145184
type: Reaction
product: 279068
product: 279044
name: R_glutaminyl_tRNA_synthase__glutamine_hydrolysing_
reactant: 278996
product: 279080
product: 279056
reactant: 279020
reactant: 279032
product: 279092
reactant: 279008
fast: false
reversible: false
notes: GENE_ASSOCIATION: ( 349 and 350 and 390 ) PROTEIN_ASSOCIATION: GatABC SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:

279068
type: SpeciesReference
stoichiometry: 1.0
species: 144300

279044
type: SpeciesReference
stoichiometry: 1.0
species: 144081

278996
type: SpeciesReference
stoichiometry: 1.0
species: 144126

279080
type: SpeciesReference
stoichiometry: 1.0
species: 144334

279056
type: SpeciesReference
stoichiometry: 1.0
species: 144296

279020
type: SpeciesReference
stoichiometry: 1.0
species: 144302

279032
type: SpeciesReference
stoichiometry: 1.0
species: 144330

279092
type: SpeciesReference
stoichiometry: 1.0
species: 144630

279008
type: SpeciesReference
stoichiometry: 1.0
species: 144294

145472
type: Reaction
product: 290564
reactant: 290552
notes: GENE_ASSOCIATION: ( 120 or 114 ) PROTEIN_ASSOCIATION: GlmM SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 5.4.2.10
fast: false
reversible: true
name: R_phosphoglucosamine_mutase

290564
type: SpeciesReference
stoichiometry: 1.0
species: 144283

290552
type: SpeciesReference
stoichiometry: 1.0
species: 144282

144841
type: Reaction
reversible: false
product: 265977
name: R_Acyl_acyl_carrier_proteinmalonyl_acyl_carrier_protein_C_acyltransferase__decarboxylating_
notes: GENE_ASSOCIATION: 274 PROTEIN_ASSOCIATION: FabF SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.41
product: 265989
reactant: 265953
fast: false
reactant: 265941
reactant: 265929
product: 265965

265977
type: SpeciesReference
stoichiometry: 1.0
species: 144069

144069
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Acetoacetyl_ACP_C4H5O2X

265989
type: SpeciesReference
stoichiometry: 1.0
species: 144155

265953
type: SpeciesReference
stoichiometry: 1.0
species: 144403

265941
type: SpeciesReference
stoichiometry: 1.0
species: 144334

265929
type: SpeciesReference
stoichiometry: 1.0
species: 144053

265965
type: SpeciesReference
stoichiometry: 1.0
species: 144050

145418
type: Reaction
fast: false
reversible: false
reactant: 288335
reactant: 288322
product: 288361
product: 288348
notes: GENE_ASSOCIATION: 409 PROTEIN_ASSOCIATION: MazG SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
name: R_Nucleoside_triphosphate_pyrophosphorylase__datp_
product: 288373

288335
type: SpeciesReference
stoichiometry: 1.0
species: 144330

288322
type: SpeciesReference
stoichiometry: 1.0
species: 144187

288361
type: SpeciesReference
stoichiometry: 1.0
species: 144334

288348
type: SpeciesReference
stoichiometry: 1.0
species: 144184

144184
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dAMP_C10H12N5O6P

288373
type: SpeciesReference
stoichiometry: 1.0
species: 144639

144070
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Adenosyl_cobinamide_C58H84CoN16O11

145412
type: Reaction
reactant: 288080
name: R_Nucleoside_triphosphate_pyrophosphorylase__dgtp_
fast: false
notes: GENE_ASSOCIATION: 409 PROTEIN_ASSOCIATION: MazG SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
reversible: false
product: 288116
product: 288128
reactant: 288092
product: 288104

288080
type: SpeciesReference
stoichiometry: 1.0
species: 144208

288116
type: SpeciesReference
stoichiometry: 1.0
species: 144334

288128
type: SpeciesReference
stoichiometry: 1.0
species: 144639

288092
type: SpeciesReference
stoichiometry: 1.0
species: 144330

288104
type: SpeciesReference
stoichiometry: 1.0
species: 144206

145298
type: Reaction
name: R_2_isopropylmalate_synthase
reversible: false
product: 283493
reactant: 283469
notes: GENE_ASSOCIATION: ( 220 or 216 ) PROTEIN_ASSOCIATION: LeuA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.1.3.12
fast: false
reactant: 283457
product: 283506
reactant: 283481
product: 283519

283493
type: SpeciesReference
stoichiometry: 1.0
species: 143978

143978
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Carboxy_3_hydroxy_4_methylpentanoate_C7H10O5

283469
type: SpeciesReference
stoichiometry: 1.0
species: 144058

283457
type: SpeciesReference
stoichiometry: 1.0
species: 143998

283506
type: SpeciesReference
stoichiometry: 1.0
species: 144161

283481
type: SpeciesReference
stoichiometry: 1.0
species: 144330

283519
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145252
type: Reaction
product: 281688
product: 281676
reactant: 281664
notes: GENE_ASSOCIATION: 339 PROTEIN_ASSOCIATION: FabZ SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 4.2.1.58
fast: false
reversible: false
name: R__3R__3_Hydroxyoctadecanoyl_acyl_carrier_protein_hydro_lyase

281688
type: SpeciesReference
stoichiometry: 1.0
species: 144330

281676
type: SpeciesReference
stoichiometry: 1.0
species: 143971

281664
type: SpeciesReference
stoichiometry: 1.0
species: 143993

144408
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Mannose_6_phosphate_C6H11O9P

145624
type: Reaction
reactant: 296272
notes: GENE_ASSOCIATION: 147 PROTEIN_ASSOCIATION: TyrS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.1
product: 296295
product: 296308
product: 296320
fast: false
reactant: 296284
name: R_Tyrosyl_tRNA_synthetase
reversible: false
reactant: 296259

296272
type: SpeciesReference
stoichiometry: 1.0
species: 144738

144738
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Tyr__HOX

296295
type: SpeciesReference
stoichiometry: 1.0
species: 144103

296308
type: SpeciesReference
stoichiometry: 1.0
species: 144639

296320
type: SpeciesReference
stoichiometry: 1.0
species: 144749

296284
type: SpeciesReference
stoichiometry: 1.0
species: 144748

296259
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145618
type: Reaction
notes: GENE_ASSOCIATION: ( 380 and ( 379 or 287 ) ) PROTEIN_ASSOCIATION: ( TrpA and TrpB ) SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.2.1.20
reactant: 295995
reversible: false
reactant: 296007
product: 296031
name: R_tryptophan_synthase__indoleglycerol_phosphate_
product: 296043
product: 296019
fast: false

295995
type: SpeciesReference
stoichiometry: 1.0
species: 143997

296007
type: SpeciesReference
stoichiometry: 1.0
species: 144677

296031
type: SpeciesReference
stoichiometry: 1.0
species: 144330

296043
type: SpeciesReference
stoichiometry: 1.0
species: 144741

296019
type: SpeciesReference
stoichiometry: 1.0
species: 144279

144318
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Geranyl_diphosphate_C10H17O7P2

145195
type: Reaction
reactant: 279501
reactant: 279513
product: 279562
product: 279538
reversible: false
fast: false
name: R_Glycyl_tRNA_synthetase
product: 279550
notes: GENE_ASSOCIATION: 206 PROTEIN_ASSOCIATION: GlyQS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.14
reactant: 279526

279501
type: SpeciesReference
stoichiometry: 1.0
species: 144126

279513
type: SpeciesReference
stoichiometry: 1.0
species: 144303

279562
type: SpeciesReference
stoichiometry: 1.0
species: 144639

279538
type: SpeciesReference
stoichiometry: 1.0
species: 144103

279550
type: SpeciesReference
stoichiometry: 1.0
species: 144314

279526
type: SpeciesReference
stoichiometry: 1.0
species: 144723

145496
type: Reaction
product: 291327
product: 291314
reactant: 291301
reactant: 291288
notes: GENE_ASSOCIATION: 127 PROTEIN_ASSOCIATION: Phyd SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_Hydrolase_Class___RXN_R02973_

291327
type: SpeciesReference
stoichiometry: 1.0
species: 144634

291314
type: SpeciesReference
stoichiometry: 1.0
species: 144179

144179
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Cysteamine_C2H8NS

291301
type: SpeciesReference
stoichiometry: 1.0
species: 144661

291288
type: SpeciesReference
stoichiometry: 1.0
species: 144330

145394
type: Reaction
product: 287416
product: 287404
reactant: 287392
reactant: 287379
notes: GENE_ASSOCIATION: 68 PROTEIN_ASSOCIATION: Ndk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.4.6
fast: false
reversible: true
name: R_nucleoside_diphosphate_kinase__ATPdUDP_

287416
type: SpeciesReference
stoichiometry: 1.0
species: 144239

287404
type: SpeciesReference
stoichiometry: 1.0
species: 144081

287392
type: SpeciesReference
stoichiometry: 1.0
species: 144236

144236
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dUDP_C9H11N2O11P2

287379
type: SpeciesReference
stoichiometry: 1.0
species: 144126

144806
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_H_H

145475
type: Reaction
reactant: 290648
reactant: 290636
product: 290684
product: 290660
notes: GENE_ASSOCIATION: 145 PROTEIN_ASSOCIATION: SerA2 SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.1.1.95
reversible: true
product: 290672
name: R_phosphoglycerate_dehydrogenase
fast: false

290648
type: SpeciesReference
stoichiometry: 1.0
species: 144578

290636
type: SpeciesReference
stoichiometry: 1.0
species: 144011

144011
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Phospho_D_glycerate_C3H4O7P

290684
type: SpeciesReference
stoichiometry: 1.0
species: 144579

290660
type: SpeciesReference
stoichiometry: 1.0
species: 144013

290672
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145649
type: Reaction
product: 297187
reactant: 297175
notes: GENE_ASSOCIATION: 299 PROTEIN_ASSOCIATION: XylA SUBSYSTEM: S_Carbohydrate_Metabolism PROTEIN_CLASS: 5.3.1.5
fast: false
reversible: false
name: R_xylose_isomerase

297187
type: SpeciesReference
stoichiometry: 1.0
species: 144292

144292
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Glucose_C6H12O6

297175
type: SpeciesReference
stoichiometry: 1.0
species: 144275

145643
type: Reaction
product: 296957
product: 296970
reactant: 296909
reactant: 296933
reactant: 296921
notes: GENE_ASSOCIATION: 85 PROTEIN_ASSOCIATION: ValS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.9
fast: false
product: 296945
name: R_Valyl_tRNA_synthetase
reversible: false

296957
type: SpeciesReference
stoichiometry: 1.0
species: 144639

296970
type: SpeciesReference
stoichiometry: 1.0
species: 144775

144775
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Valyl_tRNA_Val__C5H11NO2X

296909
type: SpeciesReference
stoichiometry: 1.0
species: 144126

296933
type: SpeciesReference
stoichiometry: 1.0
species: 144772

296921
type: SpeciesReference
stoichiometry: 1.0
species: 144740

296945
type: SpeciesReference
stoichiometry: 1.0
species: 144103

144584
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Ammonium_hydroxide_H5NO

144920
type: Reaction
product: 269018
product: 268994
reactant: 268970
name: R_aspartate_semialdehyde_dehydrogenase
reversible: true
fast: false
product: 269006
notes: GENE_ASSOCIATION: 276 PROTEIN_ASSOCIATION: Asd SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.2.1.11
reactant: 268982
reactant: 268958

269018
type: SpeciesReference
stoichiometry: 1.0
species: 144581

268994
type: SpeciesReference
stoichiometry: 1.0
species: 144029

144029
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_4_Phospho_L_aspartate_C4H6NO7P

268970
type: SpeciesReference
stoichiometry: 1.0
species: 144580

269006
type: SpeciesReference
stoichiometry: 1.0
species: 144334

268982
type: SpeciesReference
stoichiometry: 1.0
species: 144630

268958
type: SpeciesReference
stoichiometry: 1.0
species: 144123

144123
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Aspartate_4_semialdehyde_C4H7NO3

144326
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_H2_H2

144614
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Pyridoxine_5__phosphate_C8H10NO6P

145011
type: Reaction
product: 273430
reversible: false
reactant: 273394
reactant: 273418
notes: GENE_ASSOCIATION: 338 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.3.1.10
product: 273442
name: R_Decanoyl_acyl_carrier_proteinmalonyl_CoA__C_acyltransferase
fast: false
reactant: 273406

273430
type: SpeciesReference
stoichiometry: 1.0
species: 144202

273394
type: SpeciesReference
stoichiometry: 1.0
species: 143967

273418
type: SpeciesReference
stoichiometry: 1.0
species: 144579

273442
type: SpeciesReference
stoichiometry: 1.0
species: 144578

273406
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145082
type: Reaction
product: 275589
reactant: 275577
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Glycine_betaine_exchange

275589
type: SpeciesReference
stoichiometry: 1.0
species: 144802

144802
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Glycine_betaine_C5H11NO2

275577
type: SpeciesReference
stoichiometry: 1.0
species: 144307

144255
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Fuculose_1_phosphate_C6H11O8P

145051
type: Reaction
reactant: 274854
name: R_2_dehydropantoate_2_reductase
notes: GENE_ASSOCIATION: ( 221 or 102 ) PROTEIN_ASSOCIATION: YlbQ SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 1.1.1.169
reversible: false
product: 274890
reactant: 274842
product: 274878
fast: false
reactant: 274866

274854
type: SpeciesReference
stoichiometry: 1.0
species: 144334

274890
type: SpeciesReference
stoichiometry: 1.0
species: 144610

274842
type: SpeciesReference
stoichiometry: 1.0
species: 143941

143941
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Dehydropantoate_C6H9O4

274878
type: SpeciesReference
stoichiometry: 1.0
species: 144580

274866
type: SpeciesReference
stoichiometry: 1.0
species: 144581

144814
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Mn2_Mn

145282
type: Reaction
reversible: false
fast: false
product: 282831
product: 282807
product: 282819
notes: GENE_ASSOCIATION: 65 PROTEIN_ASSOCIATION: GuaB SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 1.1.1.205
name: R_IMP_dehydrogenase
reactant: 282770
reactant: 282794
reactant: 282782

282831
type: SpeciesReference
stoichiometry: 1.0
species: 144776

282807
type: SpeciesReference
stoichiometry: 1.0
species: 144334

282819
type: SpeciesReference
stoichiometry: 1.0
species: 144579

282770
type: SpeciesReference
stoichiometry: 1.0
species: 144330

282794
type: SpeciesReference
stoichiometry: 1.0
species: 144578

282782
type: SpeciesReference
stoichiometry: 1.0
species: 144376

145325
type: Reaction
product: 284643
notes: GENE_ASSOCIATION: 274 PROTEIN_ASSOCIATION: FabF SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.41
reversible: false
reactant: 284582
reactant: 284606
reactant: 284594
product: 284631
name: R_Butyryl_acyl_carrier_proteinmalonyl_acyl_carrier_proteinC_acyltransferase__decarboxylating_
fast: false
product: 284618

284643
type: SpeciesReference
stoichiometry: 1.0
species: 144155

284582
type: SpeciesReference
stoichiometry: 1.0
species: 144130

284606
type: SpeciesReference
stoichiometry: 1.0
species: 144403

284594
type: SpeciesReference
stoichiometry: 1.0
species: 144334

284631
type: SpeciesReference
stoichiometry: 1.0
species: 144050

284618
type: SpeciesReference
stoichiometry: 1.0
species: 144003

144003
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Oxohexanoyl_acyl_carrier_protein_C6H9O2X

145570
type: Reaction
product: 294190
product: 294203
product: 294166
notes: GENE_ASSOCIATION: 4 PROTEIN_ASSOCIATION: Lys1 SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.5.1.7
reactant: 294154
fast: false
name: R_saccharopine_dehydrogenase__NAD__L_lysine_forming_
product: 294178
reversible: true
reactant: 294142
reactant: 294130

294190
type: SpeciesReference
stoichiometry: 1.0
species: 144400

294203
type: SpeciesReference
stoichiometry: 1.0
species: 144579

294166
type: SpeciesReference
stoichiometry: 1.0
species: 144091

294154
type: SpeciesReference
stoichiometry: 1.0
species: 144578

294178
type: SpeciesReference
stoichiometry: 1.0
species: 144334

294142
type: SpeciesReference
stoichiometry: 1.0
species: 144330

294130
type: SpeciesReference
stoichiometry: 1.0
species: 144051

144914
type: Reaction
reactant: 268752
reactant: 268764
reversible: false
product: 268789
product: 268825
notes: GENE_ASSOCIATION: 334 PROTEIN_ASSOCIATION: ArgG SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.3.4.5
product: 268801
reactant: 268776
product: 268813
fast: false
name: R_argininosuccinate_synthase

268752
type: SpeciesReference
stoichiometry: 1.0
species: 144122

268764
type: SpeciesReference
stoichiometry: 1.0
species: 144126

268789
type: SpeciesReference
stoichiometry: 1.0
species: 144103

268825
type: SpeciesReference
stoichiometry: 1.0
species: 144639

268801
type: SpeciesReference
stoichiometry: 1.0
species: 144113

144113
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N_omega___L_Arginino_succinate_C10H17N4O6

268776
type: SpeciesReference
stoichiometry: 1.0
species: 144149

144149
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Citrulline_C6H13N3O3

268813
type: SpeciesReference
stoichiometry: 1.0
species: 144334

143915
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_1_2_Diacylglycerol_C5H6O5R2

145036
type: Reaction
product: 274361
product: 274349
reactant: 274337
reactant: 274325
notes: GENE_ASSOCIATION: 401 PROTEIN_ASSOCIATION: FolP SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.15
fast: false
reversible: false
name: R_dihydropteroate_synthase

274361
type: SpeciesReference
stoichiometry: 1.0
species: 144330

274349
type: SpeciesReference
stoichiometry: 1.0
species: 144219

144219
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Dihydropteroate_C14H13N6O3

274337
type: SpeciesReference
stoichiometry: 1.0
species: 144017

144017
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_4_Aminobenzoate_C7H6NO2

274325
type: SpeciesReference
stoichiometry: 1.0
species: 143934

143934
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Amino_4_hydroxy_6_hydroxymethyl_7_8_dihydropteridine_C7H9N5O2

145037
type: Reaction
product: 274409
product: 274397
reactant: 274385
reactant: 274373
notes: GENE_ASSOCIATION: 401 PROTEIN_ASSOCIATION: FolP SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.15
fast: false
reversible: false
name: R_dihydropteroate_synthase

274409
type: SpeciesReference
stoichiometry: 1.0
species: 144639

274397
type: SpeciesReference
stoichiometry: 1.0
species: 144219

274385
type: SpeciesReference
stoichiometry: 1.0
species: 144017

274373
type: SpeciesReference
stoichiometry: 1.0
species: 143933

143933
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Amino_4_hydroxy_6_hydroxymethyl_7_8_dihydropteridine_diphosphate_C7H8N5O8P2

145363
type: Reaction
product: 286165
product: 286153
reactant: 286141
reactant: 286129
notes: GENE_ASSOCIATION: 117 PROTEIN_ASSOCIATION: MtaP SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.4.2.28
fast: false
reversible: false
name: R_5__methylthioadenosine_phosphorylase

286165
type: SpeciesReference
stoichiometry: 1.0
species: 144075

144075
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Adenine_C5H5N5

286153
type: SpeciesReference
stoichiometry: 1.0
species: 144039

286141
type: SpeciesReference
stoichiometry: 1.0
species: 144630

286129
type: SpeciesReference
stoichiometry: 1.0
species: 144042

144042
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_Methylthioadenosine_C11H15N5O3S

145061
type: Reaction
product: 275253
reactant: 275240
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Acetate_exchange

275253
type: SpeciesReference
stoichiometry: 1.0
species: 144783

144783
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Acetate_C2H3O2

275240
type: SpeciesReference
stoichiometry: 1.0
species: 144055

145118
type: Reaction
product: 276355
reversible: true
fast: false
reactant: 276343
reactant: 276330
product: 276380
product: 276367
notes: GENE_ASSOCIATION: 339 PROTEIN_ASSOCIATION: FatB SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 3.1.2.14
name: R_fatty_acyl_ACP_hydrolase

276355
type: SpeciesReference
stoichiometry: 1.0
species: 144050

276343
type: SpeciesReference
stoichiometry: 1.0
species: 144597

276330
type: SpeciesReference
stoichiometry: 1.0
species: 144330

276380
type: SpeciesReference
stoichiometry: 1.0
species: 144598

276367
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145062
type: Reaction
product: 275277
reactant: 275265
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Antimonite_exchange

275277
type: SpeciesReference
stoichiometry: 1.0
species: 144784

275265
type: SpeciesReference
stoichiometry: 1.0
species: 144107

145076
type: Reaction
product: 275493
reactant: 275481
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_1_4_Dichlorobenzene__para_Dichlorobenzene__exchange

275493
type: SpeciesReference
stoichiometry: 1.0
species: 144796

275481
type: SpeciesReference
stoichiometry: 1.0
species: 144191

144191
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_1_4_Dichlorobenzene__para_Dichlorobenzene__C6H4Cl2

144228
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Dephospho_CoA_C21H33N7O13P2S

145349
type: Reaction
product: 285656
product: 285644
reactant: 285632
reactant: 285620
notes: GENE_ASSOCIATION: ( 438 or 330 ) PROTEIN_ASSOCIATION: MsrA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_L_methionine_S_oxide_reductase__H2O2_

285656
type: SpeciesReference
stoichiometry: 1.0
species: 144546

285644
type: SpeciesReference
stoichiometry: 1.0
species: 144330

285632
type: SpeciesReference
stoichiometry: 1.0
species: 144410

285620
type: SpeciesReference
stoichiometry: 1.0
species: 144328

145267
type: Reaction
product: 282217
product: 282205
reactant: 282192
reactant: 282180
notes: GENE_ASSOCIATION: ( 196 or 209 ) PROTEIN_ASSOCIATION: Hpt SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.4.2.8
fast: false
reversible: false
name: R_hypoxanthine_phosphoribosyltransferase__Hypoxanthine_

282217
type: SpeciesReference
stoichiometry: 1.0
species: 144639

282205
type: SpeciesReference
stoichiometry: 1.0
species: 144376

282192
type: SpeciesReference
stoichiometry: 1.0
species: 144656

282180
type: SpeciesReference
stoichiometry: 1.0
species: 144360

145268
type: Reaction
reactant: 282241
product: 282253
fast: false
reactant: 282229
notes: GENE_ASSOCIATION: 95 PROTEIN_ASSOCIATION: Icd SUBSYSTEM: S_Citrate_Cycle__TCA_ PROTEIN_CLASS: 1.1.1.42
product: 282277
reversible: true
name: R_isocitrate_dehydrogenase__NADP_
product: 282265

282241
type: SpeciesReference
stoichiometry: 1.0
species: 144580

282253
type: SpeciesReference
stoichiometry: 1.0
species: 144091

282229
type: SpeciesReference
stoichiometry: 1.0
species: 144364

282277
type: SpeciesReference
stoichiometry: 1.0
species: 144581

282265
type: SpeciesReference
stoichiometry: 1.0
species: 144155

145261
type: Reaction
product: 282012
product: 282000
reactant: 281988
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.5.1.44
fast: false
reversible: false
name: R_Homospermidine_synthase

282012
type: SpeciesReference
stoichiometry: 1.0
species: 144582

282000
type: SpeciesReference
stoichiometry: 1.0
species: 144359

281988
type: SpeciesReference
stoichiometry: 2.0
species: 144660

145304
type: Reaction
product: 283772
product: 283748
product: 283796
notes: GENE_ASSOCIATION: 338 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.41
fast: false
product: 283760
reversible: false
reactant: 283724
reactant: 283736
reactant: 283700
name: R_b_ketoacyl_synthetase__Iso_C170_
reactant: 283712
product: 283784

283772
type: SpeciesReference
stoichiometry: 1.0
species: 144250

283748
type: SpeciesReference
stoichiometry: 6.0
species: 144155

283796
type: SpeciesReference
stoichiometry: 12.0
species: 144580

283760
type: SpeciesReference
stoichiometry: 7.0
species: 144161

283724
type: SpeciesReference
stoichiometry: 6.0
species: 144406

283736
type: SpeciesReference
stoichiometry: 12.0
species: 144581

283700
type: SpeciesReference
stoichiometry: 17.0
species: 144334

283712
type: SpeciesReference
stoichiometry: 1.0
species: 144383

283784
type: SpeciesReference
stoichiometry: 5.0
species: 144330

145220
type: Reaction
name: R__3R__3_Hydroxydecanoyl_acyl_carrier_proteinNADP_oxidoreductase
reactant: 280468
reactant: 280456
notes: GENE_ASSOCIATION: ( 340 or 189 ) PROTEIN_ASSOCIATION: FabG1 SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.100
reactant: 280443
product: 280493
reversible: false
product: 280480
fast: false

280468
type: SpeciesReference
stoichiometry: 1.0
species: 144581

280456
type: SpeciesReference
stoichiometry: 1.0
species: 144334

280443
type: SpeciesReference
stoichiometry: 1.0
species: 144002

144002
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Oxodecanoyl_acyl_carrier_protein_C10H17O2X

280493
type: SpeciesReference
stoichiometry: 1.0
species: 144580

280480
type: SpeciesReference
stoichiometry: 1.0
species: 143987

145594
type: Reaction
reversible: false
reactant: 295117
reactant: 295105
notes: GENE_ASSOCIATION: 121 PROTEIN_ASSOCIATION: DapD SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.3.1.117
reactant: 295129
fast: false
name: R_tetrahydropicolinate_succinylase
product: 295141
product: 295153

295117
type: SpeciesReference
stoichiometry: 1.0
species: 144692

295105
type: SpeciesReference
stoichiometry: 1.0
species: 144330

295129
type: SpeciesReference
stoichiometry: 1.0
species: 144700

295141
type: SpeciesReference
stoichiometry: 1.0
species: 144161

295153
type: SpeciesReference
stoichiometry: 1.0
species: 144685

145342
type: Reaction
reactant: 285342
notes: GENE_ASSOCIATION: 16 PROTEIN_ASSOCIATION: IspD SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
reactant: 285330
name: R_2_C_methyl_D_erythritol_4_phosphate_cytidylyltransferase
product: 285366
fast: false
product: 285354
reversible: false
reactant: 285318

285342
type: SpeciesReference
stoichiometry: 1.0
species: 144334

285330
type: SpeciesReference
stoichiometry: 1.0
species: 144174

285366
type: SpeciesReference
stoichiometry: 1.0
species: 144639

285354
type: SpeciesReference
stoichiometry: 1.0
species: 144022

285318
type: SpeciesReference
stoichiometry: 1.0
species: 143951

144716
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Arg__HOX

144751
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

144977
type: Reaction
reactant: 271862
reactant: 271850
product: 271874
name: R_carbon_monoxide_dehydrogenase
fast: false
notes: GENE_ASSOCIATION: ( 171 or 170 or 172 or 174 ) PROTEIN_ASSOCIATION: CooS SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.2.99.2
reactant: 271838
product: 271898
product: 271886
reversible: true

271862
type: SpeciesReference
stoichiometry: 1.0
species: 144330

271850
type: SpeciesReference
stoichiometry: 2.0
species: 144256

271874
type: SpeciesReference
stoichiometry: 1.0
species: 144155

271838
type: SpeciesReference
stoichiometry: 1.0
species: 144159

144159
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Carbon_monoxide_CO

271898
type: SpeciesReference
stoichiometry: 2.0
species: 144334

271886
type: SpeciesReference
stoichiometry: 2.0
species: 144259

145516
type: Reaction
product: 292197
notes: GENE_ASSOCIATION: 226 PROTEIN_ASSOCIATION: PurD SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 6.3.4.13
product: 292209
reactant: 292161
reactant: 292137
reversible: false
product: 292185
name: R_phosphoribosylglycinamide_synthetase
fast: false
product: 292173
reactant: 292149

292197
type: SpeciesReference
stoichiometry: 1.0
species: 144334

292209
type: SpeciesReference
stoichiometry: 1.0
species: 144630

292161
type: SpeciesReference
stoichiometry: 1.0
species: 144644

144644
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_Phospho_beta_D_ribosylamine_C5H11NO7P

292137
type: SpeciesReference
stoichiometry: 1.0
species: 144126

292185
type: SpeciesReference
stoichiometry: 1.0
species: 144284

144284
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N1__5_Phospho_D_ribosyl_glycinamide_C7H14N2O8P

292173
type: SpeciesReference
stoichiometry: 1.0
species: 144081

292149
type: SpeciesReference
stoichiometry: 1.0
species: 144303

145510
type: Reaction
product: 291908
reactant: 291896
notes: GENE_ASSOCIATION: 102 PROTEIN_ASSOCIATION: TyrA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.3.1.12
product: 291932
name: R_prephenate_dehydrogenase
product: 291920
reversible: false
reactant: 291884
fast: false

291908
type: SpeciesReference
stoichiometry: 1.0
species: 143974

291896
type: SpeciesReference
stoichiometry: 1.0
species: 144638

291932
type: SpeciesReference
stoichiometry: 1.0
species: 144579

291920
type: SpeciesReference
stoichiometry: 1.0
species: 144155

291884
type: SpeciesReference
stoichiometry: 1.0
species: 144578

145214
type: Reaction
product: 280297
product: 280285
reactant: 280273
reactant: 280261
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.2.1.1
fast: false
reversible: true
name: R_carbonate_dehydratase__HCO3_equilibration_reaction_

280297
type: SpeciesReference
stoichiometry: 1.0
species: 144339

280285
type: SpeciesReference
stoichiometry: 1.0
species: 144334

280273
type: SpeciesReference
stoichiometry: 1.0
species: 144330

280261
type: SpeciesReference
stoichiometry: 1.0
species: 144155

145588
type: Reaction
name: R_sulfate_transport_via_ABC_system
product: 294949
reactant: 294901
product: 294925
fast: false
reversible: false
reactant: 294877
notes: GENE_ASSOCIATION: 213 PROTEIN_ASSOCIATION: CysAP SUBSYSTEM: S_Transport PROTEIN_CLASS:
reactant: 294889
product: 294913
product: 294937

294949
type: SpeciesReference
stoichiometry: 1.0
species: 144687

294901
type: SpeciesReference
stoichiometry: 1.0
species: 144688

294925
type: SpeciesReference
stoichiometry: 1.0
species: 144334

294877
type: SpeciesReference
stoichiometry: 1.0
species: 144126

294889
type: SpeciesReference
stoichiometry: 1.0
species: 144330

294913
type: SpeciesReference
stoichiometry: 1.0
species: 144081

294937
type: SpeciesReference
stoichiometry: 1.0
species: 144630

144917
type: Reaction
product: 268921
reactant: 268909
notes: GENE_ASSOCIATION: 437 PROTEIN_ASSOCIATION: ArsB2 SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: false
name: R_Arsenate_transporter

268921
type: SpeciesReference
stoichiometry: 1.0
species: 144117

268909
type: SpeciesReference
stoichiometry: 1.0
species: 144115

144115
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Arsenate_AsHO4

145388
type: Reaction
product: 287218
product: 287205
reactant: 287192
reactant: 287179
notes: GENE_ASSOCIATION: 68 PROTEIN_ASSOCIATION: Ndk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.4.6
fast: false
reversible: true
name: R_nucleoside_diphosphate_kinase__ATPUDP_

287218
type: SpeciesReference
stoichiometry: 1.0
species: 144771

287205
type: SpeciesReference
stoichiometry: 1.0
species: 144081

287192
type: SpeciesReference
stoichiometry: 1.0
species: 144761

287179
type: SpeciesReference
stoichiometry: 1.0
species: 144126

144834
type: Reaction
reversible: false
reactant: 265639
reactant: 265652
product: 265664
reactant: 265627
product: 265688
name: R_acetyl_CoA_carboxylase
notes: GENE_ASSOCIATION: ( 24 and 25 ) PROTEIN_ASSOCIATION: AccC SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 6.4.1.2
product: 265700
product: 265676
fast: false

265639
type: SpeciesReference
stoichiometry: 1.0
species: 144126

265652
type: SpeciesReference
stoichiometry: 1.0
species: 144339

265664
type: SpeciesReference
stoichiometry: 1.0
species: 144081

265627
type: SpeciesReference
stoichiometry: 1.0
species: 144058

265688
type: SpeciesReference
stoichiometry: 1.0
species: 144406

265700
type: SpeciesReference
stoichiometry: 1.0
species: 144630

265676
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145382
type: Reaction
reactant: 286863
product: 286923
reactant: 286875
notes: GENE_ASSOCIATION: 289 PROTEIN_ASSOCIATION: NadE2 SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 6.3.5.1
product: 286935
product: 286911
fast: false
name: R_NAD___synthase__glutamine_hydrolyzing_
reactant: 286887
reversible: false
product: 286947
product: 286959
reactant: 286899

286863
type: SpeciesReference
stoichiometry: 1.0
species: 144126

286923
type: SpeciesReference
stoichiometry: 1.0
species: 144300

286875
type: SpeciesReference
stoichiometry: 1.0
species: 144227

286935
type: SpeciesReference
stoichiometry: 1.0
species: 144334

286911
type: SpeciesReference
stoichiometry: 1.0
species: 144103

286887
type: SpeciesReference
stoichiometry: 1.0
species: 144294

286947
type: SpeciesReference
stoichiometry: 1.0
species: 144578

286959
type: SpeciesReference
stoichiometry: 1.0
species: 144639

286899
type: SpeciesReference
stoichiometry: 1.0
species: 144330

144874
type: Reaction
product: 267218
product: 267206
reactant: 267194
notes: GENE_ASSOCIATION: 228 PROTEIN_ASSOCIATION: PurB SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 4.3.2.2
fast: false
reversible: false
name: R_adenylosuccinate_lyase

267218
type: SpeciesReference
stoichiometry: 1.0
species: 144276

267206
type: SpeciesReference
stoichiometry: 1.0
species: 144089

267194
type: SpeciesReference
stoichiometry: 1.0
species: 143926

143926
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__S__2_5_Amino_1__5_phospho_D_ribosyl_imidazole_4_carboxamidosuccinate_C13H15N4O12P

145328
type: Reaction
fast: false
product: 284787
reactant: 284727
product: 284775
notes: GENE_ASSOCIATION: 274 PROTEIN_ASSOCIATION: FabF SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.41
reversible: false
product: 284763
name: R_Octanoyl_acyl_carrier_proteinmalonyl_acyl_carrier_protein___C_acyltransferase__decarboxylating_
reactant: 284739
reactant: 284751

284787
type: SpeciesReference
stoichiometry: 1.0
species: 144155

284727
type: SpeciesReference
stoichiometry: 1.0
species: 144334

284775
type: SpeciesReference
stoichiometry: 1.0
species: 144050

284763
type: SpeciesReference
stoichiometry: 1.0
species: 144002

284739
type: SpeciesReference
stoichiometry: 1.0
species: 144403

284751
type: SpeciesReference
stoichiometry: 1.0
species: 144600

144127
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Biotinyl_5__AMP_C20H27N7O9PS

145292
type: Reaction
product: 283336
product: 283324
reactant: 283312
notes: GENE_ASSOCIATION: ( 93 and 94 and 218 and 219 ) PROTEIN_ASSOCIATION: LeuCD SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.2.1.35
fast: false
reversible: true
name: R_Isopropylmalate_isomerase

283336
type: SpeciesReference
stoichiometry: 1.0
species: 144330

283324
type: SpeciesReference
stoichiometry: 1.0
species: 144139

144139
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Citraconate_C5H6O4

283312
type: SpeciesReference
stoichiometry: 1.0
species: 144150

144165
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Cobamide_coenzyme_C72H100CoN18O17P

145612
type: Reaction
product: 295834
product: 295821
reactant: 295808
reactant: 295795
notes: GENE_ASSOCIATION: 69 PROTEIN_ASSOCIATION: ThiL SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.7.4.16
fast: false
reversible: true
name: R_thiamine_phosphate_kinase

295834
type: SpeciesReference
stoichiometry: 1.0
species: 144704

144704
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Thiamine_diphosphate_C12H16N4O7P2S

295821
type: SpeciesReference
stoichiometry: 1.0
species: 144081

295808
type: SpeciesReference
stoichiometry: 1.0
species: 144703

295795
type: SpeciesReference
stoichiometry: 1.0
species: 144126

144988
type: Reaction
name: R_Cob_II_yrinate_a_c_diamide_synthase__glutamine_hydrolysing_
reactant: 272455
reactant: 272467
reversible: false
product: 272491
reactant: 272443
fast: false
product: 272527
product: 272540
product: 272515
reactant: 272479
notes: GENE_ASSOCIATION: 29 PROTEIN_ASSOCIATION: CobB SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
product: 272503

272455
type: SpeciesReference
stoichiometry: 2.0
species: 144166

144166
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Cobyrinate_C45H52CoN4O14

272467
type: SpeciesReference
stoichiometry: 4.0
species: 144294

272491
type: SpeciesReference
stoichiometry: 4.0
species: 144081

272443
type: SpeciesReference
stoichiometry: 4.0
species: 144126

272527
type: SpeciesReference
stoichiometry: 2.0
species: 144334

272540
type: SpeciesReference
stoichiometry: 2.0
species: 144639

272515
type: SpeciesReference
stoichiometry: 4.0
species: 144300

272479
type: SpeciesReference
stoichiometry: 2.0
species: 144330

272503
type: SpeciesReference
stoichiometry: 2.0
species: 144158

144158
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

145156
type: Reaction
fast: false
reactant: 277839
reactant: 277851
product: 277863
product: 277875
reactant: 277827
notes: GENE_ASSOCIATION: ( 121 or 122 ) PROTEIN_ASSOCIATION: RfbA SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.7.24
reversible: false
name: R_glucose_1_phosphate_thymidylyltransferase

277839
type: SpeciesReference
stoichiometry: 1.0
species: 144278

277851
type: SpeciesReference
stoichiometry: 1.0
species: 144334

277863
type: SpeciesReference
stoichiometry: 1.0
species: 144232

277875
type: SpeciesReference
stoichiometry: 1.0
species: 144639

277827
type: SpeciesReference
stoichiometry: 1.0
species: 144235

143949
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Methylbutanoyl_CoA_C26H40N7O17P3S

144996
type: Reaction
product: 272889
product: 272877
reactant: 272865
reactant: 272853
notes: GENE_ASSOCIATION: 111 PROTEIN_ASSOCIATION: Adk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.4.11
fast: false
reversible: true
name: R_deoxyadenylate_kinase

272889
type: SpeciesReference
stoichiometry: 1.0
species: 144183

144183
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_dADP_C10H12N5O9P2

272877
type: SpeciesReference
stoichiometry: 1.0
species: 144081

272865
type: SpeciesReference
stoichiometry: 1.0
species: 144184

272853
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145573
type: Reaction
product: 294347
product: 294335
reactant: 294323
reactant: 294311
notes: GENE_ASSOCIATION: ( 198 or 127 ) PROTEIN_ASSOCIATION: DapE SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 3.5.1.18
fast: false
reversible: false
name: R_succinyl_diaminopimelate_desuccinylase

294347
type: SpeciesReference
stoichiometry: 1.0
species: 144691

294335
type: SpeciesReference
stoichiometry: 1.0
species: 143929

294323
type: SpeciesReference
stoichiometry: 1.0
species: 144683

294311
type: SpeciesReference
stoichiometry: 1.0
species: 144330

145535
type: Reaction
product: 292954
product: 292942
reactant: 292930
reactant: 292918
notes: GENE_ASSOCIATION: 324 PROTEIN_ASSOCIATION: SerB SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 3.1.3.3
fast: false
reversible: false
name: R_phosphoserine_phosphatase__L_serine_

292954
type: SpeciesReference
stoichiometry: 1.0
species: 144677

292942
type: SpeciesReference
stoichiometry: 1.0
species: 144630

292930
type: SpeciesReference
stoichiometry: 1.0
species: 144659

292918
type: SpeciesReference
stoichiometry: 1.0
species: 144330

145196
type: Reaction
product: 279634
reversible: false
fast: false
notes: GENE_ASSOCIATION: 65 PROTEIN_ASSOCIATION: GuaC SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 1.7.1.7
reactant: 279586
reactant: 279574
product: 279610
name: R_GMP_reductase
reactant: 279598
product: 279622

279634
type: SpeciesReference
stoichiometry: 1.0
species: 144582

279586
type: SpeciesReference
stoichiometry: 2.0
species: 144334

279574
type: SpeciesReference
stoichiometry: 1.0
species: 144316

279610
type: SpeciesReference
stoichiometry: 1.0
species: 144376

279598
type: SpeciesReference
stoichiometry: 1.0
species: 144581

279622
type: SpeciesReference
stoichiometry: 1.0
species: 144580

145079
type: Reaction
product: 275541
reactant: 275529
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Fe2_exchange

275541
type: SpeciesReference
stoichiometry: 1.0
species: 144799

144799
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Fe2_Fe

275529
type: SpeciesReference
stoichiometry: 1.0
species: 144262

145490
type: Reaction
product: 291154
product: 291142
reactant: 291130
reactant: 291118
notes: GENE_ASSOCIATION: 8 PROTEIN_ASSOCIATION: PitA SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_phosphate_transport_inout_via_proton_symporter

291154
type: SpeciesReference
stoichiometry: 1.0
species: 144630

291142
type: SpeciesReference
stoichiometry: 1.0
species: 144334

291130
type: SpeciesReference
stoichiometry: 1.0
species: 144631

291118
type: SpeciesReference
stoichiometry: 1.0
species: 144335

144755
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_UDP_N_acetylmuramate_C20H28N3O19P2

144898
type: Reaction
name: R_aldehyde_dehydrogenase__glyceraldehyde__NAD_
fast: false
notes: GENE_ASSOCIATION: 342 PROTEIN_ASSOCIATION: AldH SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.2.1.3
reactant: 268173
reactant: 268149
product: 268209
product: 268185
reactant: 268161
reversible: true
product: 268197

268173
type: SpeciesReference
stoichiometry: 1.0
species: 144578

268149
type: SpeciesReference
stoichiometry: 1.0
species: 144304

268209
type: SpeciesReference
stoichiometry: 1.0
species: 144579

268185
type: SpeciesReference
stoichiometry: 1.0
species: 144310

144310
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__R__Glycerate_C3H5O4

268161
type: SpeciesReference
stoichiometry: 1.0
species: 144330

268197
type: SpeciesReference
stoichiometry: 2.0
species: 144334

144563
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Menaquinol_8_C51H74O2

145405
type: Reaction
fast: false
reversible: true
reactant: 287825
product: 287837
product: 287850
reactant: 287813
notes: GENE_ASSOCIATION: 1 PROTEIN_ASSOCIATION: NadD SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.7.7.1
reactant: 287801
name: R_nicotinamide_nucleotide_adenylyltransferase

287825
type: SpeciesReference
stoichiometry: 1.0
species: 144590

287837
type: SpeciesReference
stoichiometry: 1.0
species: 144578

287850
type: SpeciesReference
stoichiometry: 1.0
species: 144639

287813
type: SpeciesReference
stoichiometry: 1.0
species: 144334

287801
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145430
type: Reaction
reactant: 288809
notes: GENE_ASSOCIATION: 362 PROTEIN_ASSOCIATION: ArgF SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.1.3.3
product: 288857
reactant: 288821
product: 288845
fast: false
product: 288833
reversible: true
name: R_ornithine_carbamoyltransferase

288809
type: SpeciesReference
stoichiometry: 1.0
species: 144138

288857
type: SpeciesReference
stoichiometry: 1.0
species: 144630

288821
type: SpeciesReference
stoichiometry: 1.0
species: 144603

288845
type: SpeciesReference
stoichiometry: 1.0
species: 144334

288833
type: SpeciesReference
stoichiometry: 1.0
species: 144149

144358
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Homoserine_C4H9NO3

145445
type: Reaction
product: 289463
product: 289451
reactant: 289438
reactant: 289426
notes: GENE_ASSOCIATION: 6 PROTEIN_ASSOCIATION: PyrF SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 4.1.1.23
fast: false
reversible: false
name: R_orotidine_5__phosphate_decarboxylase

289463
type: SpeciesReference
stoichiometry: 1.0
species: 144765

289451
type: SpeciesReference
stoichiometry: 1.0
species: 144155

289438
type: SpeciesReference
stoichiometry: 1.0
species: 144604

144604
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Orotidine_5__phosphate_C10H10N2O11P

289426
type: SpeciesReference
stoichiometry: 1.0
species: 144334

144396
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Lipid_A_Disaccharide_C68H127N2O20P

144135
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Cob_I_alamin_C62H88CoN13O14P

145636
type: Reaction
product: 296704
product: 296692
reactant: 296680
notes: GENE_ASSOCIATION: 412 PROTEIN_ASSOCIATION: HemD SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 4.2.1.75
fast: false
reversible: false
name: R_uroporphyrinogen_III_synthase

296704
type: SpeciesReference
stoichiometry: 1.0
species: 144767

296692
type: SpeciesReference
stoichiometry: 1.0
species: 144330

296680
type: SpeciesReference
stoichiometry: 1.0
species: 144356

144356
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Hydroxymethylbilane_C40H38N4O17

144083
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_ADPribose_C15H21N5O14P2

145559
type: Reaction
reversible: false
reactant: 293826
product: 293838
reactant: 293814
product: 293862
notes: GENE_ASSOCIATION: ( 52 or 364 ) PROTEIN_ASSOCIATION: NrdD SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 1.17.4.2
fast: false
name: R_ribonucleoside_triphosphate_reductase__ATP_
product: 293850

293826
type: SpeciesReference
stoichiometry: 1.0
species: 144714

293838
type: SpeciesReference
stoichiometry: 1.0
species: 144187

293814
type: SpeciesReference
stoichiometry: 1.0
species: 144126

293862
type: SpeciesReference
stoichiometry: 1.0
species: 144712

293850
type: SpeciesReference
stoichiometry: 1.0
species: 144330

145181
type: Reaction
reversible: false
reactant: 278876
fast: false
reactant: 278864
product: 278912
reactant: 278888
product: 278936
name: R_L_glutamine_transport_via_ABC_system
product: 278900
notes: GENE_ASSOCIATION: ( 81 and 80 and 79 ) PROTEIN_ASSOCIATION: ( GlnH and GlnP and GlnQ ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
product: 278924

278876
type: SpeciesReference
stoichiometry: 1.0
species: 144330

278864
type: SpeciesReference
stoichiometry: 1.0
species: 144126

278912
type: SpeciesReference
stoichiometry: 1.0
species: 144294

278888
type: SpeciesReference
stoichiometry: 1.0
species: 144295

144295
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_L_Glutamine_C5H10N2O3

278936
type: SpeciesReference
stoichiometry: 1.0
species: 144630

278900
type: SpeciesReference
stoichiometry: 1.0
species: 144081

278924
type: SpeciesReference
stoichiometry: 1.0
species: 144334

144839
type: Reaction
product: 265917
product: 265905
reactant: 265893
reactant: 265881
notes: GENE_ASSOCIATION: ( 222 and 223 ) PROTEIN_ASSOCIATION: IlvBH SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.1.3.18
fast: false
reversible: false
name: R_acetolactate_synthase__Also_catalyzes_ACHBS_

265917
type: SpeciesReference
stoichiometry: 1.0
species: 144155

265905
type: SpeciesReference
stoichiometry: 1.0
species: 144098

265893
type: SpeciesReference
stoichiometry: 2.0
species: 144664

265881
type: SpeciesReference
stoichiometry: 1.0
species: 144334

144877
type: Reaction
product: 267350
product: 267338
reactant: 267326
reactant: 267314
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 3.5.3.11
fast: false
reversible: false
name: R_agmatinase

267350
type: SpeciesReference
stoichiometry: 1.0
species: 144769

144769
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Urea_CH4N2O

267338
type: SpeciesReference
stoichiometry: 1.0
species: 144660

267326
type: SpeciesReference
stoichiometry: 1.0
species: 144330

267314
type: SpeciesReference
stoichiometry: 1.0
species: 144085

145136
type: Reaction
fast: false
product: 277138
product: 277126
notes: GENE_ASSOCIATION: 381 PROTEIN_ASSOCIATION: ThyX SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
name: R_Thymidylate_synthase__FAD_
reversible: false
reactant: 277090
reactant: 277078
product: 277114
reactant: 277102

277138
type: SpeciesReference
stoichiometry: 1.0
species: 144702

277126
type: SpeciesReference
stoichiometry: 1.0
species: 144252

277090
type: SpeciesReference
stoichiometry: 1.0
species: 144254

144254
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_FADH2_C27H33N9O15P2

277078
type: SpeciesReference
stoichiometry: 1.0
species: 144238

277114
type: SpeciesReference
stoichiometry: 1.0
species: 144234

277102
type: SpeciesReference
stoichiometry: 1.0
species: 144554

145424
type: Reaction
product: 288604
product: 288592
reactant: 288580
reactant: 288568
notes: GENE_ASSOCIATION: ( 128 or 500 ) PROTEIN_ASSOCIATION: Dgt SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 3.1.5.1
fast: false
reversible: false
name: R_Nucleoside_triphosphate_tripolyhydrolase

288604
type: SpeciesReference
stoichiometry: 1.0
species: 144643

288592
type: SpeciesReference
stoichiometry: 1.0
species: 144319

144319
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Guanosine_C10H13N5O5

288580
type: SpeciesReference
stoichiometry: 1.0
species: 144330

288568
type: SpeciesReference
stoichiometry: 1.0
species: 144322

144619
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Phosphatidylglycerophosphate_C8H11O13P2R2

145615
type: Reaction
product: 295923
reactant: 295911
notes: GENE_ASSOCIATION: 192 PROTEIN_ASSOCIATION: TpiA SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 5.3.1.1
fast: false
reversible: true
name: R_triose_phosphate_isomerase

295923
type: SpeciesReference
stoichiometry: 1.0
species: 144279

295911
type: SpeciesReference
stoichiometry: 1.0
species: 144210

145120
type: Reaction
reversible: true
product: 276428
name: R_fatty_acyl_ACP_hydrolase
product: 276416
fast: false
reactant: 276404
reactant: 276392
notes: GENE_ASSOCIATION: 339 PROTEIN_ASSOCIATION: FatB SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 3.1.2.14
product: 276440

276428
type: SpeciesReference
stoichiometry: 1.0
species: 144334

276416
type: SpeciesReference
stoichiometry: 1.0
species: 144050

276404
type: SpeciesReference
stoichiometry: 1.0
species: 144366

276392
type: SpeciesReference
stoichiometry: 1.0
species: 144330

276440
type: SpeciesReference
stoichiometry: 1.0
species: 144367

144037
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_Amino_6__5__phosphoribitylamino_uracil_C9H15N4O9P

144306
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Glycine_betaine_C5H11NO2

144940
type: Reaction
product: 269757
reactant: 269745
product: 269769
fast: false
reversible: false
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS:
reactant: 269733
name: R_ATP_maintenance_requirment
product: 269781

269757
type: SpeciesReference
stoichiometry: 1.0
species: 144081

269745
type: SpeciesReference
stoichiometry: 1.0
species: 144330

269769
type: SpeciesReference
stoichiometry: 1.0
species: 144334

269733
type: SpeciesReference
stoichiometry: 1.0
species: 144126

269781
type: SpeciesReference
stoichiometry: 1.0
species: 144630

144190
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N6__1_2_Dicarboxyethyl__AMP_C14H14N5O11P

145023
type: Reaction
product: 273817
product: 273805
reactant: 273792
reactant: 273780
notes: GENE_ASSOCIATION: 214 PROTEIN_ASSOCIATION: DfrA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 1.5.1.3
fast: false
reversible: true
name: R_dihydrofolate_reductase

273817
type: SpeciesReference
stoichiometry: 1.0
species: 144581

273805
type: SpeciesReference
stoichiometry: 1.0
species: 144268

273792
type: SpeciesReference
stoichiometry: 1.0
species: 144580

273780
type: SpeciesReference
stoichiometry: 1.0
species: 144211

144730
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Met__HOX

145106
type: Reaction
product: 276002
reactant: 275990
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Sulfate_exchange

276002
type: SpeciesReference
stoichiometry: 1.0
species: 144825

144825
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Sulfate_O4S

275990
type: SpeciesReference
stoichiometry: 1.0
species: 144688

145448
type: Reaction
product: 289584
product: 289572
reactant: 289560
notes: GENE_ASSOCIATION: 414 PROTEIN_ASSOCIATION: Ocd SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 4.3.1.12
fast: false
reversible: false
name: R_ornithine_cyclodeaminase

289584
type: SpeciesReference
stoichiometry: 1.0
species: 144653

289572
type: SpeciesReference
stoichiometry: 1.0
species: 144582

289560
type: SpeciesReference
stoichiometry: 1.0
species: 144603

145351
type: Reaction
product: 285717
name: R_Methionyl_tRNA_synthetase
notes: GENE_ASSOCIATION: 66 PROTEIN_ASSOCIATION: MetG SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.10
reactant: 285668
reactant: 285680
reversible: false
product: 285729
product: 285705
reactant: 285692
fast: false

285717
type: SpeciesReference
stoichiometry: 1.0
species: 144547

144547
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Methionyl_tRNA__Met__C5H11NO2SX

285668
type: SpeciesReference
stoichiometry: 1.0
species: 144126

285680
type: SpeciesReference
stoichiometry: 1.0
species: 144410

285729
type: SpeciesReference
stoichiometry: 1.0
species: 144639

285705
type: SpeciesReference
stoichiometry: 1.0
species: 144103

285692
type: SpeciesReference
stoichiometry: 1.0
species: 144730

145487
type: Reaction
product: 291021
product: 291009
reactant: 290997
reversible: false
product: 291034
reactant: 290985
notes: GENE_ASSOCIATION: ( 53 and 54 ) PROTEIN_ASSOCIATION: PheRS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.20
name: R_Phenylalanyl_tRNA_synthetase
reactant: 290973
fast: false

291021
type: SpeciesReference
stoichiometry: 1.0
species: 144624

144624
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Phenylalanyl_tRNA_Phe__C9H11NO2X

291009
type: SpeciesReference
stoichiometry: 1.0
species: 144103

290997
type: SpeciesReference
stoichiometry: 1.0
species: 144732

291034
type: SpeciesReference
stoichiometry: 1.0
species: 144639

290985
type: SpeciesReference
stoichiometry: 1.0
species: 144622

290973
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145312
type: Reaction
reactant: 284085
product: 284121
reactant: 284097
notes: GENE_ASSOCIATION: 46 PROTEIN_ASSOCIATION: LeuS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.4
reactant: 284073
name: R_Leucyl_tRNA_synthetase
product: 284133
reversible: false
product: 284109
fast: false

284085
type: SpeciesReference
stoichiometry: 1.0
species: 144391

284121
type: SpeciesReference
stoichiometry: 1.0
species: 144394

144394
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Leucyl_tRNA_Leu__C6H13NO2X

284097
type: SpeciesReference
stoichiometry: 1.0
species: 144727

144727
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Leu__HOX

284073
type: SpeciesReference
stoichiometry: 1.0
species: 144126

284133
type: SpeciesReference
stoichiometry: 1.0
species: 144639

284109
type: SpeciesReference
stoichiometry: 1.0
species: 144103

144212
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Dihydrolipolprotein_H2S2X

144932
type: Reaction
reactant: 269454
product: 269478
fast: false
product: 269490
name: R_L_aspartate_oxidase
product: 269502
reactant: 269466
notes: GENE_ASSOCIATION: 420 PROTEIN_ASSOCIATION: NadB SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
reversible: false

269454
type: SpeciesReference
stoichiometry: 1.0
species: 144122

269478
type: SpeciesReference
stoichiometry: 1.0
species: 144334

269490
type: SpeciesReference
stoichiometry: 1.0
species: 144362

269502
type: SpeciesReference
stoichiometry: 1.0
species: 144691

269466
type: SpeciesReference
stoichiometry: 1.0
species: 144276

144926
type: Reaction
product: 269260
product: 269248
reactant: 269236
reactant: 269224
notes: GENE_ASSOCIATION: 407 PROTEIN_ASSOCIATION: AspK SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.7.2.4
fast: false
reversible: true
name: R_aspartate_kinase

269260
type: SpeciesReference
stoichiometry: 1.0
species: 144081

269248
type: SpeciesReference
stoichiometry: 1.0
species: 144029

269236
type: SpeciesReference
stoichiometry: 1.0
species: 144126

269224
type: SpeciesReference
stoichiometry: 1.0
species: 144122

145543
type: Reaction
reversible: false
notes: GENE_ASSOCIATION: 129 PROTEIN_ASSOCIATION: Pyk SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 2.7.1.40
reactant: 293195
reactant: 293183
name: R_pyruvate_kinase
product: 293233
reactant: 293208
fast: false
product: 293220

293195
type: SpeciesReference
stoichiometry: 1.0
species: 144334

293183
type: SpeciesReference
stoichiometry: 1.0
species: 144081

293233
type: SpeciesReference
stoichiometry: 1.0
species: 144664

293208
type: SpeciesReference
stoichiometry: 1.0
species: 144616

293220
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145049
type: Reaction
product: 274830
name: R_dephospho_CoA_kinase
product: 274805
fast: false
product: 274817
reactant: 274793
reactant: 274781
notes: GENE_ASSOCIATION: 345 PROTEIN_ASSOCIATION: CoaE SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.7.1.24
reversible: false

274830
type: SpeciesReference
stoichiometry: 1.0
species: 144334

274805
type: SpeciesReference
stoichiometry: 1.0
species: 144081

274817
type: SpeciesReference
stoichiometry: 1.0
species: 144161

274793
type: SpeciesReference
stoichiometry: 1.0
species: 144228

274781
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145375
type: Reaction
name: R_NADH_dehydrogenase__menaquinone_8__2_protons_
reactant: 286525
reactant: 286513
product: 286574
fast: false
notes: GENE_ASSOCIATION: ( ( 35 and 36 and 37 and 38 ) or ( 249 and 250 and 251 and 252 and 253 and 254 and 255 and 256 and 257 and 258 and 259 ) or 149 or ( 241 and 242 and 243 ) or 91 or ( 185 and 186 and 187 ) or ( 391 and 392 and 393 and 394 and 395 and 396 ) ) PROTEIN_ASSOCIATION: Nadhd5 SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.6.5.3
reversible: false
product: 286562
reactant: 286537
product: 286549

286525
type: SpeciesReference
stoichiometry: 1.0
species: 144569

286513
type: SpeciesReference
stoichiometry: 3.0
species: 144334

286574
type: SpeciesReference
stoichiometry: 2.0
species: 144335

286562
type: SpeciesReference
stoichiometry: 1.0
species: 144578

286537
type: SpeciesReference
stoichiometry: 1.0
species: 144579

286549
type: SpeciesReference
stoichiometry: 1.0
species: 144563

145094
type: Reaction
product: 275807
reactant: 275795
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Mn2_exchange

275807
type: SpeciesReference
stoichiometry: 1.0
species: 144814

275795
type: SpeciesReference
stoichiometry: 1.0
species: 144558

144038
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_Amino_6__5__phosphoribosylamino_uracil_C9H13N4O9P

145009
type: Reaction
reactant: 273346
notes: GENE_ASSOCIATION: 338 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.3.1.10
name: R_Dodecanoyl_acyl_carrier_protein_malonyl_CoA__C_acyltransferase
reversible: false
product: 273382
reactant: 273334
fast: false
product: 273370
reactant: 273358

273346
type: SpeciesReference
stoichiometry: 1.0
species: 144334

273382
type: SpeciesReference
stoichiometry: 1.0
species: 144578

273334
type: SpeciesReference
stoichiometry: 1.0
species: 143966

273370
type: SpeciesReference
stoichiometry: 1.0
species: 144196

273358
type: SpeciesReference
stoichiometry: 1.0
species: 144579

145582
type: Reaction
reactant: 294624
reversible: false
product: 294660
product: 294648
name: R_shikimate_kinase
fast: false
product: 294672
reactant: 294636
notes: GENE_ASSOCIATION: 106 PROTEIN_ASSOCIATION: AroK SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.7.1.71

294624
type: SpeciesReference
stoichiometry: 1.0
species: 144126

294660
type: SpeciesReference
stoichiometry: 1.0
species: 144334

294648
type: SpeciesReference
stoichiometry: 1.0
species: 144081

294672
type: SpeciesReference
stoichiometry: 1.0
species: 144681

294636
type: SpeciesReference
stoichiometry: 1.0
species: 144682

144682
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Shikimate_C7H9O5

145294
type: Reaction
product: 283373
reactant: 283360
reactant: 283348
notes: GENE_ASSOCIATION: ( 93 and 94 and 218 and 219 ) PROTEIN_ASSOCIATION: LeuCD SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
fast: false
reversible: true
name: R_Isopropylmalate_isomerase

283373
type: SpeciesReference
stoichiometry: 1.0
species: 144200

144200
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_erythro_3_Methylmalate_C5H8O5

283360
type: SpeciesReference
stoichiometry: 1.0
species: 144330

283348
type: SpeciesReference
stoichiometry: 1.0
species: 144139

145337
type: Reaction
product: 285196
reactant: 285160
notes: GENE_ASSOCIATION: 96 PROTEIN_ASSOCIATION: Mdh SUBSYSTEM: S_Citrate_Cycle__TCA_ PROTEIN_CLASS: 1.1.1.37
name: R_malate_dehydrogenase
product: 285209
fast: false
reversible: true
reactant: 285172
product: 285184

285196
type: SpeciesReference
stoichiometry: 1.0
species: 144579

285160
type: SpeciesReference
stoichiometry: 1.0
species: 144404

144404
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Malate_C4H4O5

285209
type: SpeciesReference
stoichiometry: 1.0
species: 144595

144595
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Oxaloacetate_C4H2O5

285172
type: SpeciesReference
stoichiometry: 1.0
species: 144578

285184
type: SpeciesReference
stoichiometry: 1.0
species: 144334

144911
type: Reaction
product: 268704
product: 268692
reactant: 268680
reactant: 268668
notes: GENE_ASSOCIATION: 124 PROTEIN_ASSOCIATION: SpeA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.1.1.19
fast: false
reversible: false
name: R_arginine_decarboxylase

268704
type: SpeciesReference
stoichiometry: 1.0
species: 144155

268692
type: SpeciesReference
stoichiometry: 1.0
species: 144085

268680
type: SpeciesReference
stoichiometry: 1.0
species: 144334

268668
type: SpeciesReference
stoichiometry: 1.0
species: 144111

144734
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Ser__HOX

144989
type: Reaction
product: 272588
product: 272576
reactant: 272564
reactant: 272552
notes: GENE_ASSOCIATION: 299 PROTEIN_ASSOCIATION: CysKec SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.2.99.8
fast: false
reversible: false
name: R_cysteine_synthase

272588
type: SpeciesReference
stoichiometry: 1.0
species: 144178

272576
type: SpeciesReference
stoichiometry: 1.0
species: 144054

272564
type: SpeciesReference
stoichiometry: 1.0
species: 144332

272552
type: SpeciesReference
stoichiometry: 1.0
species: 144067

143959
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Octaprenyl_3_methyl_5_hydroxy_6_methoxy_1_4_benzoquinol_C48H74O4

144951
type: Reaction
reversible: false
name: R_Cob_1_alamin_transport_via_ABC_system
reactant: 270823
product: 270860
product: 270835
product: 270847
reactant: 270811
product: 270872
fast: false
notes: GENE_ASSOCIATION: ( ( 162 or 525 ) and ( 163 or 526 ) and ( 431 or 161 or 480 or 524 ) ) PROTEIN_ASSOCIATION: ( BtuC and BtuD and BtuF ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
reactant: 270799

270823
type: SpeciesReference
stoichiometry: 1.0
species: 144137

270860
type: SpeciesReference
stoichiometry: 1.0
species: 144334

270835
type: SpeciesReference
stoichiometry: 1.0
species: 144081

270847
type: SpeciesReference
stoichiometry: 1.0
species: 144135

270811
type: SpeciesReference
stoichiometry: 1.0
species: 144330

270872
type: SpeciesReference
stoichiometry: 1.0
species: 144630

270799
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145528
type: Reaction
reversible: false
product: 292702
product: 292690
product: 292678
name: R_Prolyl_tRNA_synthetase
fast: false
reactant: 292666
reactant: 292654
notes: GENE_ASSOCIATION: 56 PROTEIN_ASSOCIATION: ProS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.15
reactant: 292642

292702
type: SpeciesReference
stoichiometry: 1.0
species: 144655

292690
type: SpeciesReference
stoichiometry: 1.0
species: 144639

292678
type: SpeciesReference
stoichiometry: 1.0
species: 144103

292666
type: SpeciesReference
stoichiometry: 1.0
species: 144733

144733
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Pro__HOX

292654
type: SpeciesReference
stoichiometry: 1.0
species: 144653

292642
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145522
type: Reaction
notes: GENE_ASSOCIATION: 229 PROTEIN_ASSOCIATION: PurC SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 6.3.2.6
reactant: 292377
product: 292438
reactant: 292365
product: 292402
fast: false
product: 292414
reactant: 292389
product: 292426
name: R_phosphoribosylaminoimidazolesuccinocarboxamide_synthase
reversible: true

292377
type: SpeciesReference
stoichiometry: 1.0
species: 144122

292438
type: SpeciesReference
stoichiometry: 1.0
species: 144630

292365
type: SpeciesReference
stoichiometry: 1.0
species: 144035

144035
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_amino_1__5_phospho_D_ribosyl_imidazole_4_carboxylate_C9H11N3O9P

292402
type: SpeciesReference
stoichiometry: 1.0
species: 143926

292414
type: SpeciesReference
stoichiometry: 1.0
species: 144081

292389
type: SpeciesReference
stoichiometry: 1.0
species: 144126

292426
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145151
type: Reaction
product: 277695
reactant: 277670
fast: false
name: R_formate_tetrahydrofolate_ligase
reactant: 277658
product: 277719
reversible: true
product: 277707
reactant: 277683
notes: GENE_ASSOCIATION: 175 PROTEIN_ASSOCIATION: Fhs SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.3.4.3

277695
type: SpeciesReference
stoichiometry: 1.0
species: 143913

277670
type: SpeciesReference
stoichiometry: 1.0
species: 144270

277658
type: SpeciesReference
stoichiometry: 1.0
species: 144126

277719
type: SpeciesReference
stoichiometry: 1.0
species: 144630

277707
type: SpeciesReference
stoichiometry: 1.0
species: 144081

277683
type: SpeciesReference
stoichiometry: 1.0
species: 144702

144114
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Arginyl_tRNA_Arg__C6H15N4O2X

145109
type: Reaction
product: 276050
reactant: 276038
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Valine_exchange

276050
type: SpeciesReference
stoichiometry: 1.0
species: 144828

144828
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_L_Valine_C5H11NO2

276038
type: SpeciesReference
stoichiometry: 1.0
species: 144773

144402
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Lysine_tRNA__Lys__C6H15N2O2X

145074
type: Reaction
product: 275469
reactant: 275457
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Cu2_exchange

275469
type: SpeciesReference
stoichiometry: 1.0
species: 144795

144795
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Cu2_Cu

275457
type: SpeciesReference
stoichiometry: 1.0
species: 144177

144177
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Cu2_Cu

144860
type: Reaction
notes: GENE_ASSOCIATION: 208 PROTEIN_ASSOCIATION: AdeC SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 3.5.4.2
name: R_adenine_deaminase
reversible: false
fast: false
product: 266759
reactant: 266723
product: 266747
reactant: 266711
reactant: 266735

266759
type: SpeciesReference
stoichiometry: 1.0
species: 144582

266723
type: SpeciesReference
stoichiometry: 1.0
species: 144334

266747
type: SpeciesReference
stoichiometry: 1.0
species: 144360

266711
type: SpeciesReference
stoichiometry: 1.0
species: 144075

266735
type: SpeciesReference
stoichiometry: 1.0
species: 144330

144062
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N_Acetyl_D_glucosamine_1_phosphate_C8H14NO9P

144861
type: Reaction
product: 266795
reactant: 266783
reactant: 266771
notes: GENE_ASSOCIATION: 111 PROTEIN_ASSOCIATION: Adk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.4.3
fast: false
reversible: true
name: R_adenylate_kinase

266795
type: SpeciesReference
stoichiometry: 2.0
species: 144081

266783
type: SpeciesReference
stoichiometry: 1.0
species: 144126

266771
type: SpeciesReference
stoichiometry: 1.0
species: 144103

144350
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Mercury__charged_2__Hg

145273
type: Reaction
product: 282457
product: 282445
reactant: 282433
reactant: 282421
notes: GENE_ASSOCIATION: 230 PROTEIN_ASSOCIATION: HisB SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.2.1.19
fast: false
reversible: false
name: R_imidazoleglycerol_phosphate_dehydratase

282457
type: SpeciesReference
stoichiometry: 1.0
species: 144375

282445
type: SpeciesReference
stoichiometry: 1.0
species: 144330

282433
type: SpeciesReference
stoichiometry: 1.0
species: 144334

282421
type: SpeciesReference
stoichiometry: 1.0
species: 144243

145232
type: Reaction
product: 280962
product: 280950
reactant: 280937
notes: GENE_ASSOCIATION: 339 PROTEIN_ASSOCIATION: FabZ SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 4.2.1.58
fast: false
reversible: false
name: R__3R__3_Hydroxybutanoyl_acyl_carrier_protein_hydro_lyase

280962
type: SpeciesReference
stoichiometry: 1.0
species: 144330

280950
type: SpeciesReference
stoichiometry: 1.0
species: 143969

143969
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_trans_Hex_2_enoyl_acp_C6H9OX

280937
type: SpeciesReference
stoichiometry: 1.0
species: 143989

143989
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__R__3_Hydroxyhexanoyl_acp_C6H11O2X

145354
type: Reaction
product: 285789
reactant: 285777
notes: GENE_ASSOCIATION: ( 82 or 142 ) PROTEIN_ASSOCIATION: CorA1 SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_magnesium_transport_inout_via_permease__no_H_

285789
type: SpeciesReference
stoichiometry: 1.0
species: 144551

144551
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Mg_Mg

285777
type: SpeciesReference
stoichiometry: 1.0
species: 144550

144550
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Mg_Mg

145508
type: Reaction
notes: GENE_ASSOCIATION: 84 PROTEIN_ASSOCIATION: Dfp SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 6.3.2.5
reversible: false
product: 291847
product: 291872
product: 291860
name: R_phosphopantothenate_cysteine_ligase
reactant: 291799
reactant: 291811
product: 291835
reactant: 291823
fast: false

291847
type: SpeciesReference
stoichiometry: 1.0
species: 144142

291872
type: SpeciesReference
stoichiometry: 1.0
species: 144630

291860
type: SpeciesReference
stoichiometry: 1.0
species: 144334

291799
type: SpeciesReference
stoichiometry: 1.0
species: 144031

291811
type: SpeciesReference
stoichiometry: 1.0
species: 144174

291835
type: SpeciesReference
stoichiometry: 1.0
species: 144033

291823
type: SpeciesReference
stoichiometry: 1.0
species: 144178

145259
type: Reaction
notes: GENE_ASSOCIATION: ( 74 or 303 ) PROTEIN_ASSOCIATION: ThrB SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.7.1.39
reactant: 281928
reversible: false
product: 281952
product: 281964
fast: false
reactant: 281940
product: 281976
name: R_homoserine_kinase

281928
type: SpeciesReference
stoichiometry: 1.0
species: 144126

281952
type: SpeciesReference
stoichiometry: 1.0
species: 144081

281964
type: SpeciesReference
stoichiometry: 1.0
species: 144334

281940
type: SpeciesReference
stoichiometry: 1.0
species: 144358

281976
type: SpeciesReference
stoichiometry: 1.0
species: 144626

145130
type: Reaction
reactant: 276897
reactant: 276909
name: R_fatty_acid__CoA_ligase__icosanoate_
product: 276921
notes: GENE_ASSOCIATION: ( 419 or 268 or 286 ) PROTEIN_ASSOCIATION: FadD SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 6.2.1.3
fast: false
product: 276933
reversible: true
product: 276945
reactant: 276885

276897
type: SpeciesReference
stoichiometry: 1.0
species: 144161

276909
type: SpeciesReference
stoichiometry: 1.0
species: 144367

276921
type: SpeciesReference
stoichiometry: 1.0
species: 144103

276933
type: SpeciesReference
stoichiometry: 1.0
species: 144368

276945
type: SpeciesReference
stoichiometry: 1.0
species: 144639

276885
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145211
type: Reaction
notes: GENE_ASSOCIATION: ( 340 or 189 ) PROTEIN_ASSOCIATION: FabG1 SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.100
reactant: 280152
product: 280176
name: R__3R__3_Hydroxybutanoyl_acyl_carrier_proteinNADP_oxidoreductase
fast: false
reactant: 280140
reactant: 280128
reversible: false
product: 280164

280152
type: SpeciesReference
stoichiometry: 1.0
species: 144581

280176
type: SpeciesReference
stoichiometry: 1.0
species: 144580

280140
type: SpeciesReference
stoichiometry: 1.0
species: 144334

280128
type: SpeciesReference
stoichiometry: 1.0
species: 144069

280164
type: SpeciesReference
stoichiometry: 1.0
species: 143985

145585
type: Reaction
product: 294781
reactant: 294745
reactant: 294732
reversible: true
name: R_succinyl_CoA_synthetase__ADP_forming_
product: 294769
reactant: 294757
product: 294793
fast: false
notes: GENE_ASSOCIATION: 419 PROTEIN_ASSOCIATION: SucCD1 SUBSYSTEM: S_Citrate_Cycle__TCA_ PROTEIN_CLASS: 6.2.1.5

294781
type: SpeciesReference
stoichiometry: 1.0
species: 144630

294745
type: SpeciesReference
stoichiometry: 1.0
species: 144161

294732
type: SpeciesReference
stoichiometry: 1.0
species: 144126

294769
type: SpeciesReference
stoichiometry: 1.0
species: 144081

294757
type: SpeciesReference
stoichiometry: 1.0
species: 144691

294793
type: SpeciesReference
stoichiometry: 1.0
species: 144692

145226
type: Reaction
reactant: 280673
name: R_hexokinase__D_glucoseATP_
fast: false
reactant: 280685
product: 280697
notes: GENE_ASSOCIATION: 13 PROTEIN_ASSOCIATION: GlcK SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 2.7.1.2
product: 280709
reversible: false
product: 280721

280673
type: SpeciesReference
stoichiometry: 1.0
species: 144126

280685
type: SpeciesReference
stoichiometry: 1.0
species: 144292

280697
type: SpeciesReference
stoichiometry: 1.0
species: 144081

280709
type: SpeciesReference
stoichiometry: 1.0
species: 144280

280721
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145471
type: Reaction
product: 290540
product: 290528
reactant: 290516
reactant: 290504
notes: GENE_ASSOCIATION: 422 PROTEIN_ASSOCIATION: PflC SUBSYSTEM: S_Carbohydrate_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_pyruvate_formate_lyase

290540
type: SpeciesReference
stoichiometry: 1.0
species: 144270

290528
type: SpeciesReference
stoichiometry: 1.0
species: 144058

290516
type: SpeciesReference
stoichiometry: 1.0
species: 144664

290504
type: SpeciesReference
stoichiometry: 1.0
species: 144161

144929
type: Reaction
reversible: false
product: 269381
product: 269357
fast: false
reactant: 269332
notes: GENE_ASSOCIATION: 420 PROTEIN_ASSOCIATION: NadB SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
reactant: 269344
name: R_L_aspartate_oxidase
product: 269369

269381
type: SpeciesReference
stoichiometry: 1.0
species: 144758

144758
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Ubiquinol_8_C49H76O4

269357
type: SpeciesReference
stoichiometry: 1.0
species: 144334

269332
type: SpeciesReference
stoichiometry: 1.0
species: 144122

269344
type: SpeciesReference
stoichiometry: 1.0
species: 144757

269369
type: SpeciesReference
stoichiometry: 1.0
species: 144362

144846
type: Reaction
product: 266170
product: 266194
name: R_acetyl_CoA_synthetase
notes: GENE_ASSOCIATION: 323 PROTEIN_ASSOCIATION: Acs SUBSYSTEM: S_Carbohydrate_Metabolism PROTEIN_CLASS: 6.2.1.1
reactant: 266134
product: 266182
fast: false
reactant: 266146
reversible: false
reactant: 266158

266170
type: SpeciesReference
stoichiometry: 1.0
species: 144058

266194
type: SpeciesReference
stoichiometry: 1.0
species: 144639

266134
type: SpeciesReference
stoichiometry: 1.0
species: 144054

266182
type: SpeciesReference
stoichiometry: 1.0
species: 144103

266146
type: SpeciesReference
stoichiometry: 1.0
species: 144126

266158
type: SpeciesReference
stoichiometry: 1.0
species: 144161

145129
type: Reaction
product: 276873
product: 276861
notes: GENE_ASSOCIATION: ( 419 or 268 or 286 ) PROTEIN_ASSOCIATION: FadD SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 6.2.1.3
name: R_fatty_acid__CoA_ligase__octadecenoate_
product: 276849
fast: false
reactant: 276837
reversible: true
reactant: 276825
reactant: 276813

276873
type: SpeciesReference
stoichiometry: 1.0
species: 144639

276861
type: SpeciesReference
stoichiometry: 1.0
species: 144602

276849
type: SpeciesReference
stoichiometry: 1.0
species: 144103

276837
type: SpeciesReference
stoichiometry: 1.0
species: 144599

276825
type: SpeciesReference
stoichiometry: 1.0
species: 144161

276813
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145417
type: Reaction
name: R_Nucleoside_triphosphate_pyrophosphorylase__ctp_
product: 288298
product: 288310
reactant: 288262
notes: GENE_ASSOCIATION: 409 PROTEIN_ASSOCIATION: MazG SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
product: 288286
fast: false
reactant: 288274
reversible: false

288298
type: SpeciesReference
stoichiometry: 1.0
species: 144334

288310
type: SpeciesReference
stoichiometry: 1.0
species: 144639

288262
type: SpeciesReference
stoichiometry: 1.0
species: 144174

288286
type: SpeciesReference
stoichiometry: 1.0
species: 144153

288274
type: SpeciesReference
stoichiometry: 1.0
species: 144330

144886
type: Reaction
product: 267712
name: R_D_alanine_D_alanine_ligase__reversible_
fast: false
product: 267676
reversible: true
notes: GENE_ASSOCIATION: 154 PROTEIN_ASSOCIATION: Ddl SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.3.2.4
product: 267700
reactant: 267664
product: 267688
reactant: 267652

267712
type: SpeciesReference
stoichiometry: 1.0
species: 144630

267676
type: SpeciesReference
stoichiometry: 1.0
species: 144081

267700
type: SpeciesReference
stoichiometry: 1.0
species: 144334

267664
type: SpeciesReference
stoichiometry: 1.0
species: 144126

267688
type: SpeciesReference
stoichiometry: 1.0
species: 144097

144097
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Alanyl_D_alanine_C6H12N2O3

267652
type: SpeciesReference
stoichiometry: 2.0
species: 144094

144320
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Reduced_glutathione_C10H16N3O6S

145411
type: Reaction
product: 288068
notes: GENE_ASSOCIATION: 360 PROTEIN_ASSOCIATION: NadC1 SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.4.2.19
name: R_nicotinate_nucleotide_diphosphorylase__carboxylating_
reversible: false
reactant: 288031
reactant: 288019
product: 288044
reactant: 288007
product: 288056
fast: false

288068
type: SpeciesReference
stoichiometry: 1.0
species: 144639

288031
type: SpeciesReference
stoichiometry: 1.0
species: 144666

288019
type: SpeciesReference
stoichiometry: 1.0
species: 144656

288044
type: SpeciesReference
stoichiometry: 1.0
species: 144155

288007
type: SpeciesReference
stoichiometry: 2.0
species: 144334

288056
type: SpeciesReference
stoichiometry: 1.0
species: 144589

145457
type: Reaction
product: 289888
product: 289876
reversible: false
reactant: 289863
fast: false
reactant: 289839
notes: GENE_ASSOCIATION: 45 PROTEIN_ASSOCIATION: ProC SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.5.1.2
name: R_pyrroline_5_carboxylate_reductase
reactant: 289851

289888
type: SpeciesReference
stoichiometry: 1.0
species: 144653

289876
type: SpeciesReference
stoichiometry: 1.0
species: 144580

289863
type: SpeciesReference
stoichiometry: 1.0
species: 144581

289839
type: SpeciesReference
stoichiometry: 1.0
species: 143921

143921
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_1_Pyrroline_5_carboxylate_C5H6NO2

289851
type: SpeciesReference
stoichiometry: 2.0
species: 144334

145297
type: Reaction
product: 283445
reactant: 283433
reactant: 283421
notes: GENE_ASSOCIATION: ( 93 and 94 and 218 and 219 ) PROTEIN_ASSOCIATION: LeuCD SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
fast: false
reversible: true
name: R_2_isopropylmalate_hydratase

283445
type: SpeciesReference
stoichiometry: 1.0
species: 143978

283433
type: SpeciesReference
stoichiometry: 1.0
species: 144330

283421
type: SpeciesReference
stoichiometry: 1.0
species: 143945

145154
type: Reaction
fast: false
product: 277791
reactant: 277767
product: 277815
product: 277803
name: R_glucosamine_1_phosphate_N_acetyltransferase
reactant: 277779
notes: GENE_ASSOCIATION: ( 121 or 122 ) PROTEIN_ASSOCIATION: GlmU SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 2.3.1.157
reversible: false

277791
type: SpeciesReference
stoichiometry: 1.0
species: 144062

277767
type: SpeciesReference
stoichiometry: 1.0
species: 144058

277815
type: SpeciesReference
stoichiometry: 1.0
species: 144334

277803
type: SpeciesReference
stoichiometry: 1.0
species: 144161

277779
type: SpeciesReference
stoichiometry: 1.0
species: 144282

145168
type: Reaction
notes: GENE_ASSOCIATION: 188 PROTEIN_ASSOCIATION: LpdA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.8.1.4
product: 278358
fast: false
product: 278382
reactant: 278345
name: R_glycine_cleavage_complex
reversible: false
reactant: 278333
product: 278370

278358
type: SpeciesReference
stoichiometry: 1.0
species: 144334

278382
type: SpeciesReference
stoichiometry: 1.0
species: 144579

278345
type: SpeciesReference
stoichiometry: 1.0
species: 144578

278333
type: SpeciesReference
stoichiometry: 1.0
species: 144212

278370
type: SpeciesReference
stoichiometry: 1.0
species: 144399

145169
type: Reaction
product: 278430
product: 278418
reactant: 278406
reactant: 278394
notes: GENE_ASSOCIATION: 123 PROTEIN_ASSOCIATION: GlmS SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 2.6.1.16
fast: false
reversible: false
name: R_glutamine_fructose_6_phosphate_transaminase

278430
type: SpeciesReference
stoichiometry: 1.0
species: 144300

278418
type: SpeciesReference
stoichiometry: 1.0
species: 144283

278406
type: SpeciesReference
stoichiometry: 1.0
species: 144294

278394
type: SpeciesReference
stoichiometry: 1.0
species: 144248

144811
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_L_Leucine_C6H13NO2

145193
type: Reaction
name: R_hydroxyacylglutathione_hydrolase
product: 279477
reactant: 279453
fast: false
reactant: 279441
product: 279465
notes: GENE_ASSOCIATION: ( 88 or 205 ) PROTEIN_ASSOCIATION: GloB SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 3.1.2.6
product: 279489
reversible: false

279477
type: SpeciesReference
stoichiometry: 1.0
species: 144334

279453
type: SpeciesReference
stoichiometry: 1.0
species: 144395

144395
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__R__S_Lactoylglutathione_C13H20N3O8S

279441
type: SpeciesReference
stoichiometry: 1.0
species: 144330

279465
type: SpeciesReference
stoichiometry: 1.0
species: 144320

279489
type: SpeciesReference
stoichiometry: 1.0
species: 144387

144387
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Lactate_C3H5O3

145205
type: Reaction
product: 280032
product: 280020
reactant: 280008
reactant: 279996
notes: GENE_ASSOCIATION: ( 196 or 209 ) PROTEIN_ASSOCIATION: Hpt SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_guanine_phosphoribosyltransferase

280032
type: SpeciesReference
stoichiometry: 1.0
species: 144639

280020
type: SpeciesReference
stoichiometry: 1.0
species: 144316

280008
type: SpeciesReference
stoichiometry: 1.0
species: 144656

279996
type: SpeciesReference
stoichiometry: 1.0
species: 144323

144323
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Guanine_C5H5N5O

145495
type: Reaction
product: 291275
product: 291262
reactant: 291250
reactant: 291238
notes: GENE_ASSOCIATION: 421 PROTEIN_ASSOCIATION: ThiD SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.7.4.7
fast: false
reversible: false
name: R_phosphomethylpyrimidine_kinase

291275
type: SpeciesReference
stoichiometry: 1.0
species: 144081

291262
type: SpeciesReference
stoichiometry: 1.0
species: 143947

291250
type: SpeciesReference
stoichiometry: 1.0
species: 144126

291238
type: SpeciesReference
stoichiometry: 1.0
species: 144021

144678
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Seryl_tRNA_Ser__C3H7NO3X

145399
type: Reaction
product: 287536
reactant: 287524
notes: GENE_ASSOCIATION: 291 PROTEIN_ASSOCIATION: AmtB SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_ammonium_transport_via_diffusion

287536
type: SpeciesReference
stoichiometry: 1.0
species: 144582

287524
type: SpeciesReference
stoichiometry: 1.0
species: 144583

145148
type: Reaction
product: 277585
product: 277573
reactant: 277561
reactant: 277549
notes: GENE_ASSOCIATION: 67 PROTEIN_ASSOCIATION: HepT SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.5.1.29
fast: false
reversible: false
name: R_farnesyltranstransferase

277585
type: SpeciesReference
stoichiometry: 1.0
species: 144639

277573
type: SpeciesReference
stoichiometry: 1.0
species: 144291

144291
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Geranylgeranyl_diphosphate_C20H33O7P2

277561
type: SpeciesReference
stoichiometry: 1.0
species: 144380

277549
type: SpeciesReference
stoichiometry: 1.0
species: 144274

144274
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Farnesyl_diphosphate_C15H25O7P2

145442
type: Reaction
reversible: false
fast: false
product: 289342
reactant: 289330
notes: GENE_ASSOCIATION: ( 70 or 71 or 12 or 400 ) PROTEIN_ASSOCIATION: UbiE SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
reactant: 289318
product: 289366
name: R_2_Octaprenyl_6_methoxy_benzoquinol_methylase
product: 289354

289342
type: SpeciesReference
stoichiometry: 1.0
species: 143961

289330
type: SpeciesReference
stoichiometry: 1.0
species: 144101

289318
type: SpeciesReference
stoichiometry: 1.0
species: 143958

143958
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Octaprenyl_6_methoxy_1_4_benzoquinol_C47H72O3

289366
type: SpeciesReference
stoichiometry: 1.0
species: 144334

289354
type: SpeciesReference
stoichiometry: 1.0
species: 144086

145436
type: Reaction
fast: false
reactant: 289038
product: 289062
product: 289075
reactant: 289050
reversible: false
notes: GENE_ASSOCIATION: 371 PROTEIN_ASSOCIATION: UbiG SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
name: R_R04988
product: 289087

289038
type: SpeciesReference
stoichiometry: 1.0
species: 143957

143957
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Octaprenyl_6_hydroxyphenol_C46H70O2

289062
type: SpeciesReference
stoichiometry: 1.0
species: 143962

143962
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Octaprenyl_6_methoxyphenol_C47H72O2

289075
type: SpeciesReference
stoichiometry: 1.0
species: 144086

289050
type: SpeciesReference
stoichiometry: 1.0
species: 144101

289087
type: SpeciesReference
stoichiometry: 1.0
species: 144334

144346
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Hexanoyl_acyl_carrier_protein_C6H11OX

145648
type: Reaction
name: R_XTP_pyrophosphatase
reactant: 297114
notes: GENE_ASSOCIATION: 328 PROTEIN_ASSOCIATION: IxpP SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
reversible: false
fast: false
product: 297163
product: 297138
reactant: 297126
product: 297150

297114
type: SpeciesReference
stoichiometry: 1.0
species: 144330

297163
type: SpeciesReference
stoichiometry: 1.0
species: 144776

297138
type: SpeciesReference
stoichiometry: 1.0
species: 144334

297126
type: SpeciesReference
stoichiometry: 1.0
species: 144777

144777
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_XTP_C10H11N4O15P3

297150
type: SpeciesReference
stoichiometry: 1.0
species: 144639

145642
type: Reaction
product: 296897
product: 296885
reactant: 296873
reactant: 296861
notes: GENE_ASSOCIATION: 5 PROTEIN_ASSOCIATION: IlvE SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.6.1.42
fast: false
reversible: true
name: R_valine_transaminase

296897
type: SpeciesReference
stoichiometry: 1.0
species: 144300

296885
type: SpeciesReference
stoichiometry: 1.0
species: 143998

296873
type: SpeciesReference
stoichiometry: 1.0
species: 144772

296861
type: SpeciesReference
stoichiometry: 1.0
species: 144091

144889
type: Reaction
product: 267784
product: 267772
reactant: 267760
reactant: 267748
notes: GENE_ASSOCIATION: 87 PROTEIN_ASSOCIATION: GlyA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_D_alanine_transaminase

267784
type: SpeciesReference
stoichiometry: 1.0
species: 144664

267772
type: SpeciesReference
stoichiometry: 1.0
species: 144662

267760
type: SpeciesReference
stoichiometry: 1.0
species: 144663

267748
type: SpeciesReference
stoichiometry: 1.0
species: 144094

144030
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_4_Phospho_D_erythronate_C4H6O8P

144607
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Palmitoyl_ACP__n_C160ACP__C16H31OX

145627
type: Reaction
fast: false
name: R_UDP_N_acetylglucosamine_diphosphorylase
reactant: 296379
notes: GENE_ASSOCIATION: ( 121 or 122 ) PROTEIN_ASSOCIATION: GlmU SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 2.7.7.23
reactant: 296392
product: 296416
reversible: false
reactant: 296404
product: 296428

296379
type: SpeciesReference
stoichiometry: 1.0
species: 144062

296392
type: SpeciesReference
stoichiometry: 1.0
species: 144334

296416
type: SpeciesReference
stoichiometry: 1.0
species: 144639

296404
type: SpeciesReference
stoichiometry: 1.0
species: 144771

296428
type: SpeciesReference
stoichiometry: 1.0
species: 144754

145628
type: Reaction
reversible: false
reactant: 296452
name: R_UDP_N_acetylenolpyruvoylglucosamine_reductase
fast: false
reactant: 296464
product: 296488
product: 296476
notes: GENE_ASSOCIATION: 154 PROTEIN_ASSOCIATION: MurB SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.1.1.158
reactant: 296440

296452
type: SpeciesReference
stoichiometry: 1.0
species: 144581

296464
type: SpeciesReference
stoichiometry: 1.0
species: 144752

296488
type: SpeciesReference
stoichiometry: 1.0
species: 144755

296476
type: SpeciesReference
stoichiometry: 1.0
species: 144580

296440
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145324
type: Reaction
product: 284570
reactant: 284558
notes: GENE_ASSOCIATION: 113 PROTEIN_ASSOCIATION: ManA SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 5.3.1.8
fast: false
reversible: true
name: R_mannose_6_phosphate_isomerase

284570
type: SpeciesReference
stoichiometry: 1.0
species: 144248

284558
type: SpeciesReference
stoichiometry: 1.0
species: 144408

144230
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Dethiobiotin_C10H17N2O3

144286
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Glycolaldehyde_C2H4O2

144944
type: Reaction
reversible: false
fast: false
product: 269963
reactant: 269927
name: R_biotin_acetyl_CoA_carboxylase_ligase
reactant: 269915
product: 269951
notes: GENE_ASSOCIATION: 235 PROTEIN_ASSOCIATION: BirA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 6.3.4.15
reactant: 269939

269963
type: SpeciesReference
stoichiometry: 1.0
species: 144639

269927
type: SpeciesReference
stoichiometry: 1.0
species: 144129

144129
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Biotin_C10H15N2O3S

269915
type: SpeciesReference
stoichiometry: 1.0
species: 144126

269951
type: SpeciesReference
stoichiometry: 1.0
species: 144127

269939
type: SpeciesReference
stoichiometry: 1.0
species: 144334

144913
type: Reaction
product: 268740
product: 268728
reactant: 268716
notes: GENE_ASSOCIATION: 335 PROTEIN_ASSOCIATION: ArgH SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.3.2.1
fast: false
reversible: true
name: R_argininosuccinate_lyase

268740
type: SpeciesReference
stoichiometry: 1.0
species: 144276

268728
type: SpeciesReference
stoichiometry: 1.0
species: 144111

268716
type: SpeciesReference
stoichiometry: 1.0
species: 144113

144952
type: Reaction
reactant: 270896
fast: false
reversible: true
notes: GENE_ASSOCIATION: ( 429 or 326 or 301 ) PROTEIN_ASSOCIATION: CobA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.17
reactant: 270884
product: 270920
reactant: 270908
product: 270932
name: R_cob_I_alamin_adenosyltransferase

270896
type: SpeciesReference
stoichiometry: 1.0
species: 144135

270884
type: SpeciesReference
stoichiometry: 1.0
species: 144126

270920
type: SpeciesReference
stoichiometry: 1.0
species: 144079

270908
type: SpeciesReference
stoichiometry: 1.0
species: 144334

270932
type: SpeciesReference
stoichiometry: 1.0
species: 144643

145035
type: Reaction
product: 274300
name: R_diaminohydroxyphosphoribosylaminopyrimidine_deaminase
reactant: 274264
reactant: 274288
fast: false
product: 274312
reversible: false
notes: GENE_ASSOCIATION: 310 PROTEIN_ASSOCIATION: RibD SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 3.5.4.26
reactant: 274276

274300
type: SpeciesReference
stoichiometry: 1.0
species: 144038

274264
type: SpeciesReference
stoichiometry: 1.0
species: 143927

274288
type: SpeciesReference
stoichiometry: 1.0
species: 144330

274312
type: SpeciesReference
stoichiometry: 1.0
species: 144582

274276
type: SpeciesReference
stoichiometry: 1.0
species: 144334

143946
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2__alpha_D_Mannosyl__3_phosphoglycerate_C9H17O12P

145015
type: Reaction
product: 273576
product: 273564
reactant: 273552
notes: GENE_ASSOCIATION: 224 PROTEIN_ASSOCIATION: IlvD SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.2.1.9
fast: false
reversible: false
name: R_dihydroxy_acid_dehydratase__2_3_dihydroxy_3_methylbutanoate_

273576
type: SpeciesReference
stoichiometry: 1.0
species: 144330

273564
type: SpeciesReference
stoichiometry: 1.0
species: 143998

273552
type: SpeciesReference
stoichiometry: 1.0
species: 143923

145303
type: Reaction
reactant: 283664
product: 283676
fast: false
reversible: true
name: R_ketol_acid_reductoisomerase__2_Acetolactate_
notes: GENE_ASSOCIATION: 221 PROTEIN_ASSOCIATION: IlvC SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.1.1.86
product: 283688
reactant: 283639
reactant: 283651

283664
type: SpeciesReference
stoichiometry: 1.0
species: 144581

283676
type: SpeciesReference
stoichiometry: 1.0
species: 143925

283688
type: SpeciesReference
stoichiometry: 1.0
species: 144580

283639
type: SpeciesReference
stoichiometry: 1.0
species: 143931

143931
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__S__2_Aceto_2_hydroxybutanoate_C6H9O4

283651
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145609
type: Reaction
reversible: false
name: R_thymidine_kinase__ATPthymidine_
notes: GENE_ASSOCIATION: 202 PROTEIN_ASSOCIATION: Tmk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.1.21
reactant: 295684
fast: false
product: 295709
product: 295721
reactant: 295696
product: 295733

295684
type: SpeciesReference
stoichiometry: 1.0
species: 144126

295709
type: SpeciesReference
stoichiometry: 1.0
species: 144081

295721
type: SpeciesReference
stoichiometry: 1.0
species: 144234

295696
type: SpeciesReference
stoichiometry: 1.0
species: 144711

295733
type: SpeciesReference
stoichiometry: 1.0
species: 144334

144923
type: Reaction
product: 269151
product: 269139
reactant: 269127
reactant: 269115
notes: GENE_ASSOCIATION: 210 PROTEIN_ASSOCIATION: PanD SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 4.1.1.11
fast: false
reversible: false
name: R_aspartate_1_decarboxylase

269151
type: SpeciesReference
stoichiometry: 1.0
species: 144155

269139
type: SpeciesReference
stoichiometry: 1.0
species: 144093

269127
type: SpeciesReference
stoichiometry: 1.0
species: 144334

269115
type: SpeciesReference
stoichiometry: 1.0
species: 144122

144938
type: Reaction
reactant: 269659
fast: false
product: 269696
notes: GENE_ASSOCIATION: 177 PROTEIN_ASSOCIATION: AspS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.12
name: R_Aspartyl_tRNA_synthetase
product: 269708
product: 269721
reversible: false
reactant: 269684
reactant: 269671

269659
type: SpeciesReference
stoichiometry: 1.0
species: 144122

269696
type: SpeciesReference
stoichiometry: 1.0
species: 144103

269708
type: SpeciesReference
stoichiometry: 1.0
species: 144125

144125
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Aspartyl_tRNA_Asp__C4H6NO4X

269721
type: SpeciesReference
stoichiometry: 1.0
species: 144639

269684
type: SpeciesReference
stoichiometry: 1.0
species: 144718

269671
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145046
type: Reaction
product: 274709
product: 274697
reactant: 274685
reactant: 274673
notes: GENE_ASSOCIATION: ( 125 or 336 or 312 ) PROTEIN_ASSOCIATION: NtpA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_Dihydroneopterin_monophosphate_dephosphorylase

274709
type: SpeciesReference
stoichiometry: 1.0
species: 144630

274697
type: SpeciesReference
stoichiometry: 1.0
species: 144215

144215
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Amino_4_hydroxy_6__D_erythro_1_2_3_trihydroxypropyl__7_8_dihydropteridine_C9H13N5O4

274685
type: SpeciesReference
stoichiometry: 1.0
species: 144330

274673
type: SpeciesReference
stoichiometry: 1.0
species: 144218

145555
type: Reaction
reversible: false
product: 293657
product: 293669
name: R_ribonucleoside_diphosphate_reductase__GDP_
reactant: 293633
product: 293681
notes: GENE_ASSOCIATION: ( 52 or 428 or 151 ) PROTEIN_ASSOCIATION: NrdEF SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 1.17.4.1
fast: false
reactant: 293645

293657
type: SpeciesReference
stoichiometry: 1.0
species: 144204

293669
type: SpeciesReference
stoichiometry: 1.0
species: 144330

293633
type: SpeciesReference
stoichiometry: 1.0
species: 144287

293681
type: SpeciesReference
stoichiometry: 1.0
species: 144712

293645
type: SpeciesReference
stoichiometry: 1.0
species: 144714

145213
type: Reaction
reversible: false
name: R_homocitrate_synthase
product: 280237
notes: GENE_ASSOCIATION: 404 PROTEIN_ASSOCIATION: NifV SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.1.3.21
product: 280249
reactant: 280200
fast: false
product: 280224
reactant: 280188
reactant: 280212

280237
type: SpeciesReference
stoichiometry: 1.0
species: 144334

280249
type: SpeciesReference
stoichiometry: 1.0
species: 144338

280200
type: SpeciesReference
stoichiometry: 1.0
species: 144091

280224
type: SpeciesReference
stoichiometry: 1.0
species: 144161

280188
type: SpeciesReference
stoichiometry: 1.0
species: 144058

280212
type: SpeciesReference
stoichiometry: 1.0
species: 144330

145099
type: Reaction
product: 275881
reactant: 275869
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Ammonium_exchange

275881
type: SpeciesReference
stoichiometry: 1.0
species: 144818

144818
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Ammonium_H4N

275869
type: SpeciesReference
stoichiometry: 1.0
species: 144583

145086
type: Reaction
product: 275662
reactant: 275650
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_H_exchange

275662
type: SpeciesReference
stoichiometry: 1.0
species: 144806

275650
type: SpeciesReference
stoichiometry: 1.0
species: 144335

145387
type: Reaction
product: 287166
product: 287153
reactant: 287140
reactant: 287128
notes: GENE_ASSOCIATION: 68 PROTEIN_ASSOCIATION: Ndk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.4.6
fast: false
reversible: true
name: R_nucleoside_diphosphate_kinase__ATPGDP_

287166
type: SpeciesReference
stoichiometry: 1.0
species: 144322

287153
type: SpeciesReference
stoichiometry: 1.0
species: 144081

287140
type: SpeciesReference
stoichiometry: 1.0
species: 144287

287128
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145327
type: Reaction
name: R_Hexanoyl_acyl_carrier_proteinmalonyl_acyl_carrier_protein_C_acyltransferase
notes: GENE_ASSOCIATION: 274 PROTEIN_ASSOCIATION: FabF SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.41
reversible: false
reactant: 284679
reactant: 284655
reactant: 284667
product: 284691
fast: false
product: 284715
product: 284703

284679
type: SpeciesReference
stoichiometry: 1.0
species: 144403

284655
type: SpeciesReference
stoichiometry: 1.0
species: 144334

284667
type: SpeciesReference
stoichiometry: 1.0
species: 144346

284691
type: SpeciesReference
stoichiometry: 1.0
species: 144007

284715
type: SpeciesReference
stoichiometry: 1.0
species: 144155

284703
type: SpeciesReference
stoichiometry: 1.0
species: 144050

145285
type: Reaction
notes: GENE_ASSOCIATION: ( 269 and 270 ) PROTEIN_ASSOCIATION: IorAB1 SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS:
fast: false
reversible: true
reactant: 282942
reactant: 282928
name: R_indolepyruvate_ferredoxin_oxidoreductase__phenylpyvurate_
product: 282994
product: 282981
reactant: 282955
product: 282968
product: 283007

282942
type: SpeciesReference
stoichiometry: 2.0
species: 144256

282928
type: SpeciesReference
stoichiometry: 1.0
species: 144161

282994
type: SpeciesReference
stoichiometry: 1.0
species: 144334

282981
type: SpeciesReference
stoichiometry: 2.0
species: 144259

282955
type: SpeciesReference
stoichiometry: 1.0
species: 144627

282968
type: SpeciesReference
stoichiometry: 1.0
species: 144155

283007
type: SpeciesReference
stoichiometry: 1.0
species: 144620

144620
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Phenylacetyl_CoA_C29H38N7O17P3S

145291
type: Reaction
product: 283264
product: 283288
reversible: true
name: R_Isopropylmalate_dehydrogenase
product: 283300
reactant: 283252
fast: false
notes: GENE_ASSOCIATION: 217 PROTEIN_ASSOCIATION: LeuB SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
reactant: 283240
product: 283276

283264
type: SpeciesReference
stoichiometry: 1.0
species: 143955

143955
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Oxobutanoate_C4H5O3

283288
type: SpeciesReference
stoichiometry: 2.0
species: 144334

283300
type: SpeciesReference
stoichiometry: 1.0
species: 144579

283252
type: SpeciesReference
stoichiometry: 1.0
species: 144578

283240
type: SpeciesReference
stoichiometry: 1.0
species: 144200

283276
type: SpeciesReference
stoichiometry: 1.0
species: 144155

145244
type: Reaction
reversible: false
notes: GENE_ASSOCIATION: 203 PROTEIN_ASSOCIATION: ThiE SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.7.1.49
product: 281435
reactant: 281398
name: R_hydroxymethylpyrimidine_kinase__CTP_
product: 281422
fast: false
reactant: 281386
product: 281410

281435
type: SpeciesReference
stoichiometry: 1.0
species: 144334

281398
type: SpeciesReference
stoichiometry: 1.0
species: 144174

281422
type: SpeciesReference
stoichiometry: 1.0
species: 144142

281386
type: SpeciesReference
stoichiometry: 1.0
species: 144019

281410
type: SpeciesReference
stoichiometry: 1.0
species: 144021

145366
type: Reaction
product: 286261
product: 286249
reactant: 286237
reactant: 286225
notes: GENE_ASSOCIATION: ( 173 or 175 ) PROTEIN_ASSOCIATION: ( FolD ) or ( Fhs ) SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 1.5.1.5
fast: false
reversible: true
name: R_methylenetetrahydrofolate_dehydrogenase__NADP_

286261
type: SpeciesReference
stoichiometry: 1.0
species: 144581

286249
type: SpeciesReference
stoichiometry: 1.0
species: 144411

286237
type: SpeciesReference
stoichiometry: 1.0
species: 144580

286225
type: SpeciesReference
stoichiometry: 1.0
species: 144554

145367
type: Reaction
product: 286309
product: 286321
reactant: 286297
fast: false
name: R_5_10_methylenetetrahydrofolate_reductase__NADP_
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.7.99.5
reversible: false
reactant: 286285
reactant: 286273

286309
type: SpeciesReference
stoichiometry: 1.0
species: 144043

286321
type: SpeciesReference
stoichiometry: 1.0
species: 144580

286297
type: SpeciesReference
stoichiometry: 1.0
species: 144581

286285
type: SpeciesReference
stoichiometry: 1.0
species: 144554

286273
type: SpeciesReference
stoichiometry: 2.0
species: 144334

145534
type: Reaction
product: 292906
product: 292894
reactant: 292882
reactant: 292870
notes: GENE_ASSOCIATION: 146 PROTEIN_ASSOCIATION: SerC SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.6.1.52
fast: false
reversible: true
name: R_3_phosphoserine_aminotransferase

292906
type: SpeciesReference
stoichiometry: 1.0
species: 144659

292894
type: SpeciesReference
stoichiometry: 1.0
species: 144091

292882
type: SpeciesReference
stoichiometry: 1.0
species: 144300

292870
type: SpeciesReference
stoichiometry: 1.0
species: 144013

144363
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Isobutyryl_CoA_C25H38N7O17P3S

145163
type: Reaction
reversible: true
notes: GENE_ASSOCIATION: ( 121 or 122 ) PROTEIN_ASSOCIATION: GalF SUBSYSTEM: S_Carbohydrate_Metabolism PROTEIN_CLASS: 2.7.7.9
reactant: 278149
name: R_UTP_glucose_1_phosphate_uridylyltransferase
reactant: 278162
product: 278175
product: 278187
fast: false
reactant: 278136

278149
type: SpeciesReference
stoichiometry: 1.0
species: 144334

278162
type: SpeciesReference
stoichiometry: 1.0
species: 144771

278175
type: SpeciesReference
stoichiometry: 1.0
species: 144639

278187
type: SpeciesReference
stoichiometry: 1.0
species: 144763

278136
type: SpeciesReference
stoichiometry: 1.0
species: 144278

145238
type: Reaction
product: 281180
reactant: 281132
reactant: 281144
fast: false
name: R_histidinol_dehydrogenase
reactant: 281156
reversible: false
product: 281192
product: 281168
notes: GENE_ASSOCIATION: 232 PROTEIN_ASSOCIATION: HisD SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.1.1.23

281180
type: SpeciesReference
stoichiometry: 1.0
species: 144351

281132
type: SpeciesReference
stoichiometry: 1.0
species: 144330

281144
type: SpeciesReference
stoichiometry: 1.0
species: 144354

281156
type: SpeciesReference
stoichiometry: 2.0
species: 144578

281192
type: SpeciesReference
stoichiometry: 2.0
species: 144579

281168
type: SpeciesReference
stoichiometry: 3.0
species: 144334

145483
type: Reaction
product: 290852
product: 290840
reactant: 290828
reactant: 290816
notes: GENE_ASSOCIATION: 361 PROTEIN_ASSOCIATION: PgpA SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 3.1.3.27
fast: false
reversible: false
name: R_Phosphatidylglycerophosphate_phosphohydrolase

290852
type: SpeciesReference
stoichiometry: 1.0
species: 144630

290840
type: SpeciesReference
stoichiometry: 1.0
species: 144618

144618
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Phosphatidylglycerol_C8H12O10PR2

290828
type: SpeciesReference
stoichiometry: 1.0
species: 144619

290816
type: SpeciesReference
stoichiometry: 1.0
species: 144330

144852
type: Reaction
product: 266399
product: 266387
reactant: 266374
reactant: 266362
notes: GENE_ASSOCIATION: ( 164 or ( 430 or 300 ) ) PROTEIN_ASSOCIATION: ( CbiB ) or ( CbiD ) SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_adenosylcobinamide_phosphate_synthase

266399
type: SpeciesReference
stoichiometry: 1.0
species: 144330

266387
type: SpeciesReference
stoichiometry: 1.0
species: 144070

266374
type: SpeciesReference
stoichiometry: 1.0
species: 144074

266362
type: SpeciesReference
stoichiometry: 1.0
species: 143918

145444
type: Reaction
product: 289414
product: 289402
reactant: 289390
reactant: 289378
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_2_Oxo_4_methyl_3_carboxypentanoate_decarboxylation

289414
type: SpeciesReference
stoichiometry: 1.0
species: 144155

289402
type: SpeciesReference
stoichiometry: 1.0
species: 144026

289390
type: SpeciesReference
stoichiometry: 1.0
species: 144334

289378
type: SpeciesReference
stoichiometry: 1.0
species: 143979

143979
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Carboxy_4_methyl_2_oxopentanoate_C7H8O5

144133
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N_Carbamoyl_L_aspartate_C5H6N2O5

144556
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__S__Methylmalonyl_CoA_C25H35N7O19P3S

145558
type: Reaction
notes: GENE_ASSOCIATION: ( 52 or 428 or 151 ) PROTEIN_ASSOCIATION: NrdEF SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 1.17.4.1
fast: false
name: R_ribonucleoside_diphosphate_reductase__UDP_
product: 293802
reactant: 293753
product: 293790
reactant: 293766
product: 293778
reversible: false

293802
type: SpeciesReference
stoichiometry: 1.0
species: 144712

293753
type: SpeciesReference
stoichiometry: 1.0
species: 144714

293790
type: SpeciesReference
stoichiometry: 1.0
species: 144330

293766
type: SpeciesReference
stoichiometry: 1.0
species: 144761

293778
type: SpeciesReference
stoichiometry: 1.0
species: 144236

145142
type: Reaction
fast: false
product: 277367
product: 277379
name: R_FMN_adenylyltransferase
notes: GENE_ASSOCIATION: 148 PROTEIN_ASSOCIATION: RibF SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.7.7.2
reactant: 277330
reactant: 277354
reactant: 277342
reversible: false

277367
type: SpeciesReference
stoichiometry: 1.0
species: 144252

277379
type: SpeciesReference
stoichiometry: 1.0
species: 144639

277330
type: SpeciesReference
stoichiometry: 1.0
species: 144126

277354
type: SpeciesReference
stoichiometry: 1.0
species: 144334

277342
type: SpeciesReference
stoichiometry: 1.0
species: 144267

144267
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_flavin_mononucleotide_C17H19N4O9P

145187
type: Reaction
product: 279237
reactant: 279177
reactant: 279213
reversible: false
product: 279225
name: R_glutamate_synthase__NADH2_
reactant: 279201
notes: GENE_ASSOCIATION: ( 296 or 298 ) PROTEIN_ASSOCIATION: GltAB SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.4.1.14
reactant: 279189
fast: false

279237
type: SpeciesReference
stoichiometry: 1.0
species: 144578

279177
type: SpeciesReference
stoichiometry: 1.0
species: 144091

279213
type: SpeciesReference
stoichiometry: 1.0
species: 144579

279225
type: SpeciesReference
stoichiometry: 2.0
species: 144300

279201
type: SpeciesReference
stoichiometry: 1.0
species: 144334

279189
type: SpeciesReference
stoichiometry: 1.0
species: 144294

145180
type: Reaction
name: R_Glutaminyl_tRNA_synthetase
reversible: false
fast: false
product: 278852
reactant: 278791
product: 278828
product: 278840
reactant: 278815
notes: GENE_ASSOCIATION: 357 PROTEIN_ASSOCIATION: GlnS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.18
reactant: 278803

278852
type: SpeciesReference
stoichiometry: 1.0
species: 144639

278791
type: SpeciesReference
stoichiometry: 1.0
species: 144126

278828
type: SpeciesReference
stoichiometry: 1.0
species: 144103

278840
type: SpeciesReference
stoichiometry: 1.0
species: 144296

278815
type: SpeciesReference
stoichiometry: 1.0
species: 144721

144721
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_tRNA_Gln__HOX

278803
type: SpeciesReference
stoichiometry: 1.0
species: 144294

145223
type: Reaction
reactant: 280577
fast: false
reactant: 280565
name: R_Hexanoyl_acyl_carrier_proteinmalonyl_CoA_C_acyltransferase
reversible: false
product: 280613
reactant: 280589
product: 280601
notes: GENE_ASSOCIATION: 338 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.3.1.10

280577
type: SpeciesReference
stoichiometry: 1.0
species: 144334

280565
type: SpeciesReference
stoichiometry: 1.0
species: 143969

280613
type: SpeciesReference
stoichiometry: 1.0
species: 144578

280589
type: SpeciesReference
stoichiometry: 1.0
species: 144579

280601
type: SpeciesReference
stoichiometry: 1.0
species: 144346

145597
type: Reaction
product: 295225
product: 295213
reactant: 295201
notes: GENE_ASSOCIATION: 320 PROTEIN_ASSOCIATION: IlvA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_L_threonine_deaminase

295225
type: SpeciesReference
stoichiometry: 1.0
species: 144582

295213
type: SpeciesReference
stoichiometry: 1.0
species: 143955

295201
type: SpeciesReference
stoichiometry: 1.0
species: 144707

145598
type: Reaction
product: 295262
product: 295249
reactant: 295237
notes: GENE_ASSOCIATION: 415 PROTEIN_ASSOCIATION: LtaA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_L_allo_threonine_aldolase

295262
type: SpeciesReference
stoichiometry: 1.0
species: 144303

295249
type: SpeciesReference
stoichiometry: 1.0
species: 144057

295237
type: SpeciesReference
stoichiometry: 1.0
species: 144706

144838
type: Reaction
reversible: false
fast: false
reactant: 265821
name: R_2_aceto_2_hydroxybutanoate_synthase
notes: GENE_ASSOCIATION: ( 222 and 223 ) PROTEIN_ASSOCIATION: IlvBH SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
reactant: 265845
reactant: 265833
product: 265857
product: 265869

265821
type: SpeciesReference
stoichiometry: 1.0
species: 143955

265845
type: SpeciesReference
stoichiometry: 1.0
species: 144664

265833
type: SpeciesReference
stoichiometry: 1.0
species: 144334

265857
type: SpeciesReference
stoichiometry: 1.0
species: 143931

265869
type: SpeciesReference
stoichiometry: 1.0
species: 144155

143990
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__3R__3_Hydroxyicosanoyl_aceyl_carrier_protein_C20H39O2X

145415
type: Reaction
product: 288238
product: 288250
product: 288226
reactant: 288214
notes: GENE_ASSOCIATION: 409 PROTEIN_ASSOCIATION: MazG SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 3.6.1.12
reactant: 288200
fast: false
reversible: false
name: R_dCTP_diphosphatase

288238
type: SpeciesReference
stoichiometry: 1.0
species: 144334

288250
type: SpeciesReference
stoichiometry: 1.0
species: 144639

288226
type: SpeciesReference
stoichiometry: 1.0
species: 144194

288214
type: SpeciesReference
stoichiometry: 1.0
species: 144330

288200
type: SpeciesReference
stoichiometry: 1.0
species: 144195

145429
type: Reaction
product: 288797
product: 288784
reactant: 288772
reactant: 288760
notes: GENE_ASSOCIATION: 422 PROTEIN_ASSOCIATION: PflC SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_2_Oxobutanoate_formate_lyase

288797
type: SpeciesReference
stoichiometry: 1.0
species: 144636

144636
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Propanoyl_CoA_C24H36N7O17P3S

288784
type: SpeciesReference
stoichiometry: 1.0
species: 144270

288772
type: SpeciesReference
stoichiometry: 1.0
species: 144161

288760
type: SpeciesReference
stoichiometry: 1.0
species: 143955

145454
type: Reaction
product: 289778
product: 289766
reactant: 289754
reactant: 289742
notes: GENE_ASSOCIATION: 311 PROTEIN_ASSOCIATION: PyrE SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.4.2.10
fast: false
reversible: true
name: R_orotate_phosphoribosyltransferase

289778
type: SpeciesReference
stoichiometry: 1.0
species: 144656

289766
type: SpeciesReference
stoichiometry: 1.0
species: 144606

289754
type: SpeciesReference
stoichiometry: 1.0
species: 144639

289742
type: SpeciesReference
stoichiometry: 1.0
species: 144604

145423
type: Reaction
product: 288544
reversible: false
product: 288531
name: R_Nucleoside_triphosphate_pyrophosphorylase__utp_
reactant: 288519
notes: GENE_ASSOCIATION: 409 PROTEIN_ASSOCIATION: MazG SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
product: 288556
reactant: 288506
fast: false

288544
type: SpeciesReference
stoichiometry: 1.0
species: 144639

288531
type: SpeciesReference
stoichiometry: 1.0
species: 144334

288519
type: SpeciesReference
stoichiometry: 1.0
species: 144771

288556
type: SpeciesReference
stoichiometry: 1.0
species: 144765

288506
type: SpeciesReference
stoichiometry: 1.0
species: 144330

145469
type: Reaction
product: 290467
name: R_Phosphofructokinase
reversible: false
fast: false
reactant: 290455
product: 290480
notes: GENE_ASSOCIATION: 355 PROTEIN_ASSOCIATION: PfkB SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 2.7.1.11
reactant: 290443
product: 290492

290467
type: SpeciesReference
stoichiometry: 1.0
species: 144081

290455
type: SpeciesReference
stoichiometry: 1.0
species: 144695

144695
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Tagatose_6_phosphate_C6H11O9P

290480
type: SpeciesReference
stoichiometry: 1.0
species: 144334

290443
type: SpeciesReference
stoichiometry: 1.0
species: 144126

290492
type: SpeciesReference
stoichiometry: 1.0
species: 144696

145166
type: Reaction
reactant: 278284
product: 278321
product: 278308
fast: false
reversible: true
notes: GENE_ASSOCIATION: ( 329 or 179 ) PROTEIN_ASSOCIATION: PurN SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.1.2.2
reactant: 278272
product: 278296
name: R_phosphoribosylglycinamide_formyltransferase

278284
type: SpeciesReference
stoichiometry: 1.0
species: 144284

278321
type: SpeciesReference
stoichiometry: 1.0
species: 144702

278308
type: SpeciesReference
stoichiometry: 1.0
species: 144334

278272
type: SpeciesReference
stoichiometry: 1.0
species: 143913

278296
type: SpeciesReference
stoichiometry: 1.0
species: 144263

145111
type: Reaction
product: 276076
reactant: 276063
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Zinc_exchange

276076
type: SpeciesReference
stoichiometry: 1.0
species: 144829

276063
type: SpeciesReference
stoichiometry: 1.0
species: 144781

144817
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_N2_N2

145397
type: Reaction
product: 287512
product: 287500
reactant: 287488
reactant: 287476
notes: GENE_ASSOCIATION: 68 PROTEIN_ASSOCIATION: Ndk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.4.6
fast: false
reversible: true
name: R_nucleoside_diphosphate_kinase__ATPdADP_

287512
type: SpeciesReference
stoichiometry: 1.0
species: 144187

287500
type: SpeciesReference
stoichiometry: 1.0
species: 144081

287488
type: SpeciesReference
stoichiometry: 1.0
species: 144183

287476
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145030
type: Reaction
product: 274144
product: 274132
reactant: 274120
notes: GENE_ASSOCIATION: ( 402 or 401 ) PROTEIN_ASSOCIATION: FolB SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 4.1.2.25
fast: false
reversible: false
name: R_dihydroneopterin_aldolase

274144
type: SpeciesReference
stoichiometry: 1.0
species: 144286

274132
type: SpeciesReference
stoichiometry: 1.0
species: 143934

274120
type: SpeciesReference
stoichiometry: 1.0
species: 144215

145409
type: Reaction
product: 287995
reactant: 287983
notes: GENE_ASSOCIATION: 166 PROTEIN_ASSOCIATION: CobT SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_nicotinate_nucleotide_dimethylbenzimidazole_phosphoribosyltransferase

287995
type: SpeciesReference
stoichiometry: 1.0
species: 144223

144223
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5_6_Dimethylbenzimidazole_C9H10N2

287983
type: SpeciesReference
stoichiometry: 1.0
species: 144672

145105
type: Reaction
product: 275978
reactant: 275966
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Proline_exchange

275978
type: SpeciesReference
stoichiometry: 1.0
species: 144823

144823
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_L_Proline_C5H9NO2

275966
type: SpeciesReference
stoichiometry: 1.0
species: 144654

145310
type: Reaction
product: 284061
product: 284049
reactant: 284037
reactant: 284025
notes: GENE_ASSOCIATION: 5 PROTEIN_ASSOCIATION: IlvE SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.6.1.42
fast: false
reversible: true
name: R_leucine_transaminase

284061
type: SpeciesReference
stoichiometry: 1.0
species: 144300

284049
type: SpeciesReference
stoichiometry: 1.0
species: 144026

284037
type: SpeciesReference
stoichiometry: 1.0
species: 144391

284025
type: SpeciesReference
stoichiometry: 1.0
species: 144091

144266
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N_Formylmethionyl_tRNA_C6H11NO3SX

144005
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Oxohexadecanoyl_acp_C16H29O2X

144925
type: Reaction
reversible: false
product: 269200
product: 269187
notes: GENE_ASSOCIATION: 314 PROTEIN_ASSOCIATION: PyrB SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.1.3.2
reactant: 269163
name: R_aspartate_carbamoyltransferase
fast: false
reactant: 269175
product: 269212

269200
type: SpeciesReference
stoichiometry: 1.0
species: 144334

269187
type: SpeciesReference
stoichiometry: 1.0
species: 144133

269163
type: SpeciesReference
stoichiometry: 1.0
species: 144122

269175
type: SpeciesReference
stoichiometry: 1.0
species: 144138

269212
type: SpeciesReference
stoichiometry: 1.0
species: 144630

144931
type: Reaction
product: 269429
name: R_L_aspartate_oxidase
reactant: 269405
notes: GENE_ASSOCIATION: 420 PROTEIN_ASSOCIATION: NadB SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
reactant: 269393
reversible: false
product: 269417
fast: false
product: 269441

269429
type: SpeciesReference
stoichiometry: 1.0
species: 144362

269405
type: SpeciesReference
stoichiometry: 1.0
species: 144569

269393
type: SpeciesReference
stoichiometry: 1.0
species: 144122

269417
type: SpeciesReference
stoichiometry: 1.0
species: 144334

269441
type: SpeciesReference
stoichiometry: 1.0
species: 144563

144970
type: Reaction
product: 271656
product: 271644
reactant: 271632
reactant: 271620
notes: GENE_ASSOCIATION: 39 PROTEIN_ASSOCIATION: PcaC2 SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 4.1.1.44
fast: false
reversible: false
name: R_4_carboxymuconolactone_decarboxylase

271656
type: SpeciesReference
stoichiometry: 1.0
species: 144155

271644
type: SpeciesReference
stoichiometry: 1.0
species: 144045

271632
type: SpeciesReference
stoichiometry: 1.0
species: 144334

271620
type: SpeciesReference
stoichiometry: 1.0
species: 143937

143937
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_2_Carboxy_2_5_dihydro_5_oxofuran_2_acetate_C7H4O6

144971
type: Reaction
product: 271680
reactant: 271668
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_CO2_transport_out_via_diffusion

271680
type: SpeciesReference
stoichiometry: 1.0
species: 144155

271668
type: SpeciesReference
stoichiometry: 1.0
species: 144157

144157
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_CO2_CO2

145541
type: Reaction
product: 293171
reactant: 293123
product: 293159
reversible: false
fast: false
name: R_pyridoxamine_phosphate_oxidase
notes: GENE_ASSOCIATION: 418 PROTEIN_ASSOCIATION: PdxHec SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 1.4.3.5
reactant: 293135
reactant: 293110
product: 293147

293171
type: SpeciesReference
stoichiometry: 1.0
species: 144663

293123
type: SpeciesReference
stoichiometry: 1.0
species: 144594

293159
type: SpeciesReference
stoichiometry: 1.0
species: 144582

293135
type: SpeciesReference
stoichiometry: 1.0
species: 144662

293110
type: SpeciesReference
stoichiometry: 1.0
species: 144330

293147
type: SpeciesReference
stoichiometry: 1.0
species: 144328

145048
type: Reaction
reactant: 274721
notes: GENE_ASSOCIATION: ( 125 or 336 or 312 ) PROTEIN_ASSOCIATION: NtpA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
name: R_Dihydroneopterin_triphosphate_pyrophosphatase
product: 274757
product: 274769
reversible: false
product: 274745
reactant: 274733

274721
type: SpeciesReference
stoichiometry: 1.0
species: 144087

274757
type: SpeciesReference
stoichiometry: 1.0
species: 144334

274769
type: SpeciesReference
stoichiometry: 1.0
species: 144639

274745
type: SpeciesReference
stoichiometry: 1.0
species: 144218

274733
type: SpeciesReference
stoichiometry: 1.0
species: 144330

145093
type: Reaction
product: 275783
reactant: 275771
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Mg_exchange

275783
type: SpeciesReference
stoichiometry: 1.0
species: 144813

275771
type: SpeciesReference
stoichiometry: 1.0
species: 144551

144792
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_CO2_CO2

145008
type: Reaction
product: 273322
reactant: 273298
reversible: false
product: 273310
fast: false
name: R_dCMP_deaminase__CMP_
reactant: 273286
notes: GENE_ASSOCIATION: 76 PROTEIN_ASSOCIATION: ComEB SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 3.5.4.12
reactant: 273274

273322
type: SpeciesReference
stoichiometry: 1.0
species: 144765

273298
type: SpeciesReference
stoichiometry: 1.0
species: 144330

273310
type: SpeciesReference
stoichiometry: 1.0
species: 144582

273286
type: SpeciesReference
stoichiometry: 1.0
species: 144334

273274
type: SpeciesReference
stoichiometry: 1.0
species: 144153

145321
type: Reaction
reactant: 284437
notes: GENE_ASSOCIATION: ( 322 or 481 ) PROTEIN_ASSOCIATION: Mpg SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.7.7.13
reactant: 284449
reactant: 284461
fast: false
product: 284485
product: 284473
reversible: false
name: R_mannose_1_phosphate_guanylyltransferase

284437
type: SpeciesReference
stoichiometry: 1.0
species: 144322

284449
type: SpeciesReference
stoichiometry: 1.0
species: 144334

284461
type: SpeciesReference
stoichiometry: 1.0
species: 144407

144407
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_D_Mannose_1_phosphate_C6H11O9P

284485
type: SpeciesReference
stoichiometry: 1.0
species: 144639

284473
type: SpeciesReference
stoichiometry: 1.0
species: 144288

145336
type: Reaction
notes: GENE_ASSOCIATION: 274 PROTEIN_ASSOCIATION: FabF SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.41
reversible: false
reactant: 285112
product: 285124
product: 285148
reactant: 285088
name: R_Octadecanoyl_acyl_carrier_proteinmalonyl_acyl_carrier_protein__C_acyltransferase
reactant: 285100
fast: false
product: 285136

285112
type: SpeciesReference
stoichiometry: 1.0
species: 144597

285124
type: SpeciesReference
stoichiometry: 1.0
species: 144006

285148
type: SpeciesReference
stoichiometry: 1.0
species: 144155

285088
type: SpeciesReference
stoichiometry: 1.0
species: 144334

285100
type: SpeciesReference
stoichiometry: 1.0
species: 144403

285136
type: SpeciesReference
stoichiometry: 1.0
species: 144050

144910
type: Reaction
notes: GENE_ASSOCIATION: 325 PROTEIN_ASSOCIATION: P_3.7.1.5 SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 3.7.1.5
product: 268656
fast: false
product: 268632
product: 268644
reversible: false
name: R_3_Fumarylpyruvate_acylhydrolase
reactant: 268620
reactant: 268608

268656
type: SpeciesReference
stoichiometry: 1.0
species: 144664

268632
type: SpeciesReference
stoichiometry: 1.0
species: 144276

268644
type: SpeciesReference
stoichiometry: 1.0
species: 144334

268620
type: SpeciesReference
stoichiometry: 1.0
species: 144330

268608
type: SpeciesReference
stoichiometry: 1.0
species: 143983

143983
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Fumarylpyruvate_C7H4O6

144956
type: Reaction
fast: false
notes: GENE_ASSOCIATION: 279 PROTEIN_ASSOCIATION: PgsA SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS:
reactant: 271125
product: 271149
reactant: 271137
product: 271173
name: R_CDPdiacylglycerolsn_glycerol_3_phosphate_3_phosphatidyltransferase
reversible: false
product: 271161

271125
type: SpeciesReference
stoichiometry: 1.0
species: 144143

271149
type: SpeciesReference
stoichiometry: 1.0
species: 144153

271137
type: SpeciesReference
stoichiometry: 1.0
species: 144308

271173
type: SpeciesReference
stoichiometry: 1.0
species: 144619

271161
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145520
type: Reaction
product: 292353
reactant: 292341
reactant: 292329
reactant: 292317
notes: GENE_ASSOCIATION: 347 PROTEIN_ASSOCIATION: HisI_N SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 3.5.4.19
fast: false
reversible: false
name: R_phosphoribosyl_AMP_cyclohydrolase

292353
type: SpeciesReference
stoichiometry: 1.0
species: 144650

144650
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

292341
type: SpeciesReference
stoichiometry: 1.0
species: 144647

292329
type: SpeciesReference
stoichiometry: 1.0
species: 144330

292317
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145150
type: Reaction
product: 277622
name: R_formyltetrahydrofolate_deformylase
product: 277634
reactant: 277610
notes: GENE_ASSOCIATION: 329 PROTEIN_ASSOCIATION: PurUec SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 3.5.1.10
reversible: false
product: 277646
fast: false
reactant: 277597

277622
type: SpeciesReference
stoichiometry: 1.0
species: 144270

277634
type: SpeciesReference
stoichiometry: 1.0
species: 144334

277610
type: SpeciesReference
stoichiometry: 1.0
species: 144330

277646
type: SpeciesReference
stoichiometry: 1.0
species: 144702

277597
type: SpeciesReference
stoichiometry: 1.0
species: 143913

145033
type: Reaction
product: 274252
product: 274240
reactant: 274228
reactant: 274216
notes: GENE_ASSOCIATION: 315 PROTEIN_ASSOCIATION: PyrC SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 3.5.2.3
fast: false
reversible: true
name: R_dihydroorotase

274252
type: SpeciesReference
stoichiometry: 1.0
species: 144334

274240
type: SpeciesReference
stoichiometry: 1.0
species: 144133

274228
type: SpeciesReference
stoichiometry: 1.0
species: 144330

274216
type: SpeciesReference
stoichiometry: 1.0
species: 144216

145567
type: Reaction
product: 294093
reactant: 294081
notes: GENE_ASSOCIATION: 159 PROTEIN_ASSOCIATION: RpiB SUBSYSTEM: S_Pentose_Phosphate_Pathway PROTEIN_CLASS: 5.3.1.6
fast: false
reversible: true
name: R_ribose_5_phosphate_isomerase

294093
type: SpeciesReference
stoichiometry: 1.0
species: 144673

294081
type: SpeciesReference
stoichiometry: 1.0
species: 144667

145073
type: Reaction
product: 275445
reactant: 275433
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Co2_exchange

275445
type: SpeciesReference
stoichiometry: 1.0
species: 144794

275433
type: SpeciesReference
stoichiometry: 1.0
species: 144163

145361
type: Reaction
reversible: true
notes: GENE_ASSOCIATION: 356 PROTEIN_ASSOCIATION: MpgSP SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.4.1.217
reactant: 286080
name: R_Mannosyl_3_phosphoglycerate_synthase
fast: false
product: 286104
reactant: 286068
reactant: 286092
product: 286117

286080
type: SpeciesReference
stoichiometry: 1.0
species: 144288

286104
type: SpeciesReference
stoichiometry: 1.0
species: 143946

286068
type: SpeciesReference
stoichiometry: 1.0
species: 144011

286092
type: SpeciesReference
stoichiometry: 2.0
species: 144334

286117
type: SpeciesReference
stoichiometry: 1.0
species: 144287

145279
type: Reaction
reactant: 282673
reactant: 282649
reversible: false
product: 282709
product: 282721
product: 282697
reactant: 282661
notes: GENE_ASSOCIATION: ( 261 or ( 263 and 264 and 265 and 266 and 267 ) ) PROTEIN_ASSOCIATION: ( BraB ) or ( AzlCD ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
name: R_L_isoleucine_transport_via_ABC_system
product: 282685
fast: false

282673
type: SpeciesReference
stoichiometry: 1.0
species: 144372

282649
type: SpeciesReference
stoichiometry: 1.0
species: 144126

282709
type: SpeciesReference
stoichiometry: 1.0
species: 144371

282721
type: SpeciesReference
stoichiometry: 1.0
species: 144630

282697
type: SpeciesReference
stoichiometry: 1.0
species: 144334

282661
type: SpeciesReference
stoichiometry: 1.0
species: 144330

282685
type: SpeciesReference
stoichiometry: 1.0
species: 144081

145264
type: Reaction
product: 282108
product: 282096
reactant: 282084
notes: GENE_ASSOCIATION: 339 PROTEIN_ASSOCIATION: FabZ SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 4.2.1.58
fast: false
reversible: false
name: R__3R__3_Hydroxypalmitoyl_acyl_carrier_protein_hydro_lyase

282108
type: SpeciesReference
stoichiometry: 1.0
species: 144699

282096
type: SpeciesReference
stoichiometry: 1.0
species: 144330

282084
type: SpeciesReference
stoichiometry: 1.0
species: 143995

143995
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M__3R__3_Hydroxytetradecanoyl_acyl_carrier_protein_C14H27O2X

145027
type: Reaction
notes: GENE_ASSOCIATION: 7 PROTEIN_ASSOCIATION: FolC SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 6.3.2.12
reactant: 273951
product: 274023
reactant: 273963
reversible: false
product: 273987
product: 273999
product: 274011
reactant: 273975
fast: false
name: R_dihydrofolate_synthase

273951
type: SpeciesReference
stoichiometry: 1.0
species: 144126

274023
type: SpeciesReference
stoichiometry: 1.0
species: 144630

273963
type: SpeciesReference
stoichiometry: 1.0
species: 144219

273987
type: SpeciesReference
stoichiometry: 1.0
species: 144081

273999
type: SpeciesReference
stoichiometry: 1.0
species: 144211

274011
type: SpeciesReference
stoichiometry: 1.0
species: 144334

273975
type: SpeciesReference
stoichiometry: 1.0
species: 144300

145315
type: Reaction
reactant: 284243
fast: false
reactant: 284231
product: 284279
product: 284255
reversible: false
name: R_Lipid_A_disaccaride_synthase
product: 284267
notes: GENE_ASSOCIATION: 176 PROTEIN_ASSOCIATION: LpxB SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 2.4.1.182

284243
type: SpeciesReference
stoichiometry: 1.0
species: 144751

284231
type: SpeciesReference
stoichiometry: 1.0
species: 144398

284279
type: SpeciesReference
stoichiometry: 1.0
species: 144761

284255
type: SpeciesReference
stoichiometry: 1.0
species: 144334

284267
type: SpeciesReference
stoichiometry: 1.0
species: 144396

145231
type: Reaction
product: 280913
reactant: 280889
product: 280925
reactant: 280877
reversible: false
fast: false
name: R__3R__3_Hydroxypalmitoyl_acyl_carrier_proteinNADP_oxidoreductase
notes: GENE_ASSOCIATION: ( 340 or 189 ) PROTEIN_ASSOCIATION: FabG1 SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.100
reactant: 280901

280913
type: SpeciesReference
stoichiometry: 1.0
species: 143994

280889
type: SpeciesReference
stoichiometry: 1.0
species: 144334

280925
type: SpeciesReference
stoichiometry: 1.0
species: 144580

280877
type: SpeciesReference
stoichiometry: 1.0
species: 144005

280901
type: SpeciesReference
stoichiometry: 1.0
species: 144581

145546
type: Reaction
fast: false
product: 293355
product: 293331
name: R_riboflavin_kinase
notes: GENE_ASSOCIATION: 148 PROTEIN_ASSOCIATION: RibF SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.7.1.26
reactant: 293319
reactant: 293306
reversible: false
product: 293343

293355
type: SpeciesReference
stoichiometry: 1.0
species: 144334

293331
type: SpeciesReference
stoichiometry: 1.0
species: 144081

293319
type: SpeciesReference
stoichiometry: 1.0
species: 144672

293306
type: SpeciesReference
stoichiometry: 1.0
species: 144126

293343
type: SpeciesReference
stoichiometry: 1.0
species: 144267

145507
type: Reaction
product: 291750
notes: GENE_ASSOCIATION: 129 PROTEIN_ASSOCIATION: PpdK SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 2.7.9.1
product: 291763
product: 291787
fast: false
reactant: 291738
reactant: 291713
reactant: 291725
reversible: false
name: R_pyruvate_phosphate_dikinase
product: 291775

291750
type: SpeciesReference
stoichiometry: 1.0
species: 144103

291763
type: SpeciesReference
stoichiometry: 1.0
species: 144334

291787
type: SpeciesReference
stoichiometry: 1.0
species: 144639

291738
type: SpeciesReference
stoichiometry: 1.0
species: 144664

291713
type: SpeciesReference
stoichiometry: 1.0
species: 144126

291725
type: SpeciesReference
stoichiometry: 1.0
species: 144630

291775
type: SpeciesReference
stoichiometry: 1.0
species: 144616

145135
type: Reaction
product: 277066
product: 277054
reactant: 277042
notes: GENE_ASSOCIATION: 410 PROTEIN_ASSOCIATION: FucA SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 4.1.2.17
fast: false
reversible: true
name: R_L_fuculose_1_phosphate_aldolase

277066
type: SpeciesReference
stoichiometry: 1.0
species: 144390

277054
type: SpeciesReference
stoichiometry: 1.0
species: 144210

277042
type: SpeciesReference
stoichiometry: 1.0
species: 144255

145462
type: Reaction
reactant: 290068
name: R_pyruvate_carboxylase
product: 290117
product: 290105
product: 290093
notes: GENE_ASSOCIATION: ( 24 and 25 ) PROTEIN_ASSOCIATION: Pyc SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 6.4.1.1
product: 290129
fast: false
reactant: 290056
reversible: false
reactant: 290081

290068
type: SpeciesReference
stoichiometry: 1.0
species: 144339

290117
type: SpeciesReference
stoichiometry: 1.0
species: 144595

290105
type: SpeciesReference
stoichiometry: 1.0
species: 144334

290093
type: SpeciesReference
stoichiometry: 1.0
species: 144081

290129
type: SpeciesReference
stoichiometry: 1.0
species: 144630

290056
type: SpeciesReference
stoichiometry: 1.0
species: 144126

290081
type: SpeciesReference
stoichiometry: 1.0
species: 144664

145258
type: Reaction
notes: GENE_ASSOCIATION: 321 PROTEIN_ASSOCIATION: Hom SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.1.1.3
product: 281904
name: R_homoserine_dehydrogenase__NADPH_
reactant: 281880
reactant: 281868
product: 281916
fast: false
product: 281892
reversible: true

281904
type: SpeciesReference
stoichiometry: 1.0
species: 144334

281880
type: SpeciesReference
stoichiometry: 1.0
species: 144580

281868
type: SpeciesReference
stoichiometry: 1.0
species: 144358

281916
type: SpeciesReference
stoichiometry: 1.0
species: 144581

281892
type: SpeciesReference
stoichiometry: 1.0
species: 144123

144343
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Hexadecenoyl_ACP__n_C161ACP__C16H29OX

145217
type: Reaction
notes: GENE_ASSOCIATION: ( 340 or 189 ) PROTEIN_ASSOCIATION: FabG1 SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.100
name: R_3R__3_Hydroxydodecanoyl_acyl_carrier_proteinNADP_oxidoreductase
product: 280383
product: 280395
fast: false
reactant: 280371
reactant: 280359
reversible: false
reactant: 280346

280383
type: SpeciesReference
stoichiometry: 1.0
species: 143986

280395
type: SpeciesReference
stoichiometry: 1.0
species: 144580

280371
type: SpeciesReference
stoichiometry: 1.0
species: 144581

280359
type: SpeciesReference
stoichiometry: 1.0
species: 144334

280346
type: SpeciesReference
stoichiometry: 1.0
species: 144001

145210
type: Reaction
product: 280116
product: 280104
reactant: 280092
notes: GENE_ASSOCIATION: 339 PROTEIN_ASSOCIATION: FabZ SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 4.2.1.58
fast: false
reversible: false
name: R__3R__3_Hydroxybutanoyl_acyl_carrier_protein_hydro_lyase

280116
type: SpeciesReference
stoichiometry: 1.0
species: 144330

280104
type: SpeciesReference
stoichiometry: 1.0
species: 143935

280092
type: SpeciesReference
stoichiometry: 1.0
species: 143985

145175
type: Reaction
product: 278634
product: 278622
product: 278610
reactant: 278598
notes: GENE_ASSOCIATION: ( 280 or 284 ) PROTEIN_ASSOCIATION: GlgA1 SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 2.4.1.21
fast: false
reversible: false
name: R_glycogen_synthase__ADPGlc_

278634
type: SpeciesReference
stoichiometry: 1.0
species: 144334

278622
type: SpeciesReference
stoichiometry: 1.0
species: 144312

278610
type: SpeciesReference
stoichiometry: 1.0
species: 144081

278598
type: SpeciesReference
stoichiometry: 1.0
species: 144082

145058
type: Reaction
name: R_Erythrose_4_phosphate_dehydrogenase
reactant: 275156
product: 275168
product: 275192
reversible: true
product: 275180
notes: GENE_ASSOCIATION: 143 PROTEIN_ASSOCIATION: Epd SUBSYSTEM: S_Pentose_Phosphate_Pathway PROTEIN_CLASS:
fast: false
reactant: 275144
reactant: 275132

275156
type: SpeciesReference
stoichiometry: 1.0
species: 144578

275168
type: SpeciesReference
stoichiometry: 1.0
species: 144030

275192
type: SpeciesReference
stoichiometry: 1.0
species: 144579

275180
type: SpeciesReference
stoichiometry: 2.0
species: 144334

275144
type: SpeciesReference
stoichiometry: 1.0
species: 144330

275132
type: SpeciesReference
stoichiometry: 1.0
species: 144242

145225
type: Reaction
product: 280661
product: 280649
reactant: 280637
reactant: 280625
notes: GENE_ASSOCIATION: 67 PROTEIN_ASSOCIATION: HepT SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_trans_heptaprenyltranstransferase

280661
type: SpeciesReference
stoichiometry: 1.0
species: 144639

280649
type: SpeciesReference
stoichiometry: 1.0
species: 144601

280637
type: SpeciesReference
stoichiometry: 1.0
species: 144380

280625
type: SpeciesReference
stoichiometry: 1.0
species: 144344

145385
type: Reaction
name: R_nicotinate_phosphoribosyltransferase
reversible: true
notes: GENE_ASSOCIATION: 370 PROTEIN_ASSOCIATION: PncB SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.4.2.11
reactant: 287080
fast: false
reactant: 287068
product: 287104
product: 287092
product: 287116

287080
type: SpeciesReference
stoichiometry: 1.0
species: 144639

287068
type: SpeciesReference
stoichiometry: 1.0
species: 144589

287104
type: SpeciesReference
stoichiometry: 1.0
species: 144577

287092
type: SpeciesReference
stoichiometry: 1.0
species: 144334

287116
type: SpeciesReference
stoichiometry: 1.0
species: 144656

144845
type: Reaction
name: R_acyl_carrier_protein_synthase
notes: GENE_ASSOCIATION: 90 PROTEIN_ASSOCIATION: AcpS SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.7.8.7
product: 266110
reactant: 266086
fast: false
reactant: 266074
product: 266098
reversible: false
product: 266122

266110
type: SpeciesReference
stoichiometry: 1.0
species: 144334

266086
type: SpeciesReference
stoichiometry: 1.0
species: 144161

266074
type: SpeciesReference
stoichiometry: 1.0
species: 144109

144109
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_apoprotein_acyl_carrier_protein_RHO

266098
type: SpeciesReference
stoichiometry: 1.0
species: 144050

266122
type: SpeciesReference
stoichiometry: 1.0
species: 144611

144611
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

144870
type: Reaction
product: 267086
fast: false
product: 267074
reactant: 267062
product: 267098
notes: GENE_ASSOCIATION: 99 PROTEIN_ASSOCIATION: NudF SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 3.6.1.13
name: R_ADPribose_diphosphatase
reactant: 267050
reversible: false

267086
type: SpeciesReference
stoichiometry: 2.0
species: 144334

267074
type: SpeciesReference
stoichiometry: 1.0
species: 144103

267062
type: SpeciesReference
stoichiometry: 1.0
species: 144330

267098
type: SpeciesReference
stoichiometry: 1.0
species: 144667

267050
type: SpeciesReference
stoichiometry: 1.0
species: 144083

145456
type: Reaction
product: 289827
product: 289815
reactant: 289803
reactant: 289790
notes: GENE_ASSOCIATION: 24 PROTEIN_ASSOCIATION: OadD SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 4.1.1.3
fast: false
reversible: false
name: R_Oxaloacetate_decarboxylase

289827
type: SpeciesReference
stoichiometry: 1.0
species: 144664

289815
type: SpeciesReference
stoichiometry: 1.0
species: 144155

289803
type: SpeciesReference
stoichiometry: 1.0
species: 144595

289790
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145339
type: Reaction
reactant: 285234
reversible: false
product: 285246
product: 285258
reactant: 285221
product: 285270
name: R_2C_methyl_D_erythritol_2_4_cyclodiphosphate_dehydratase
fast: false
notes: GENE_ASSOCIATION: 57 PROTEIN_ASSOCIATION: IspG SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:

285234
type: SpeciesReference
stoichiometry: 1.0
species: 144579

285246
type: SpeciesReference
stoichiometry: 1.0
species: 144327

285258
type: SpeciesReference
stoichiometry: 1.0
species: 144330

285221
type: SpeciesReference
stoichiometry: 1.0
species: 143953

285270
type: SpeciesReference
stoichiometry: 1.0
species: 144578

144698
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

145256
type: Reaction
product: 281856
product: 281844
reactant: 281832
reactant: 281820
notes: GENE_ASSOCIATION: 7 PROTEIN_ASSOCIATION: MetA1 SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.3.1.31
fast: false
reversible: true
name: R_Acetyl_CoAL_homoserine_O_acetyltransferase

281856
type: SpeciesReference
stoichiometry: 1.0
species: 144161

281844
type: SpeciesReference
stoichiometry: 1.0
species: 144065

281832
type: SpeciesReference
stoichiometry: 1.0
species: 144358

281820
type: SpeciesReference
stoichiometry: 1.0
species: 144058

145379
type: Reaction
reactant: 286731
fast: false
name: R_Quinone_oxidoreductase
reactant: 286719
reversible: false
product: 286755
reactant: 286743
notes: GENE_ASSOCIATION: ( 37 and 187 and 243 ) PROTEIN_ASSOCIATION: Nadphd SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.6.5.5
product: 286767

286731
type: SpeciesReference
stoichiometry: 1.0
species: 144581

286719
type: SpeciesReference
stoichiometry: 1.0
species: 144334

286755
type: SpeciesReference
stoichiometry: 1.0
species: 144580

286743
type: SpeciesReference
stoichiometry: 1.0
species: 144757

286767
type: SpeciesReference
stoichiometry: 1.0
species: 144758

145250
type: Reaction
fast: false
reactant: 281628
product: 281640
reversible: false
notes: GENE_ASSOCIATION: ( 340 or 189 ) PROTEIN_ASSOCIATION: FabG1 SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.100
product: 281652
reactant: 281616
name: R__3R__3_Hydroxyoctanoyl_acyl_carrier_proteinNADP_oxidoreductase
reactant: 281604

281628
type: SpeciesReference
stoichiometry: 1.0
species: 144581

281640
type: SpeciesReference
stoichiometry: 1.0
species: 143991

281652
type: SpeciesReference
stoichiometry: 1.0
species: 144580

281616
type: SpeciesReference
stoichiometry: 1.0
species: 144334

281604
type: SpeciesReference
stoichiometry: 1.0
species: 144007

144999
type: Reaction
reversible: false
notes: GENE_ASSOCIATION: ( 110 or 378 ) PROTEIN_ASSOCIATION: ( AroG ) or ( AroA2 ) SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.1.2.15
fast: false
reactant: 272973
reactant: 272985
reactant: 272961
product: 273009
product: 272997
name: R_3_deoxy_D_arabino_heptulosonate_7_phosphate_synthetase

272973
type: SpeciesReference
stoichiometry: 1.0
species: 144330

272985
type: SpeciesReference
stoichiometry: 1.0
species: 144616

272961
type: SpeciesReference
stoichiometry: 1.0
species: 144242

273009
type: SpeciesReference
stoichiometry: 1.0
species: 144630

272997
type: SpeciesReference
stoichiometry: 1.0
species: 143939

145199
type: Reaction
product: 279791
product: 279779
reactant: 279767
reactant: 279755
notes: GENE_ASSOCIATION: 67 PROTEIN_ASSOCIATION: IspA SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.5.1.10
fast: false
reversible: false
name: R_geranyltranstransferase

279791
type: SpeciesReference
stoichiometry: 1.0
species: 144639

279779
type: SpeciesReference
stoichiometry: 1.0
species: 144274

279767
type: SpeciesReference
stoichiometry: 1.0
species: 144380

279755
type: SpeciesReference
stoichiometry: 1.0
species: 144318

145192
type: Reaction
product: 279429
product: 279417
reactant: 279405
reactant: 279393
notes: GENE_ASSOCIATION: 344 PROTEIN_ASSOCIATION: ProPec SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_betaine__glycine_betaine__transport_inout_via_proton_symport

279429
type: SpeciesReference
stoichiometry: 1.0
species: 144334

279417
type: SpeciesReference
stoichiometry: 1.0
species: 144306

279405
type: SpeciesReference
stoichiometry: 1.0
species: 144335

279393
type: SpeciesReference
stoichiometry: 1.0
species: 144307

145481
type: Reaction
product: 290804
reactant: 290792
notes: GENE_ASSOCIATION: ( 114 or 120 ) PROTEIN_ASSOCIATION: Pmgm1 SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 5.4.2.2
fast: false
reversible: true
name: R_phosphoglucomutase

290804
type: SpeciesReference
stoichiometry: 1.0
species: 144280

290792
type: SpeciesReference
stoichiometry: 1.0
species: 144278

144864
type: Reaction
product: 266892
product: 266880
reactant: 266868
reactant: 266856
notes: GENE_ASSOCIATION: 111 PROTEIN_ASSOCIATION: Adk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.4.8
fast: false
reversible: true
name: R_guanylate_kinase__aMPgTP_

266892
type: SpeciesReference
stoichiometry: 1.0
species: 144287

266880
type: SpeciesReference
stoichiometry: 1.0
species: 144081

266868
type: SpeciesReference
stoichiometry: 1.0
species: 144322

266856
type: SpeciesReference
stoichiometry: 1.0
species: 144103

145441
type: Reaction
reactant: 289255
reversible: false
product: 289280
fast: false
name: R_2_oxoisovalerate_dehydrogenase__acylating_3_methyl_2_oxopentanoate_
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.2.1.25
product: 289306
reactant: 289267
product: 289293
reactant: 289243

289255
type: SpeciesReference
stoichiometry: 1.0
species: 144161

289280
type: SpeciesReference
stoichiometry: 1.0
species: 143949

289306
type: SpeciesReference
stoichiometry: 1.0
species: 144579

289267
type: SpeciesReference
stoichiometry: 1.0
species: 144578

289293
type: SpeciesReference
stoichiometry: 1.0
species: 144155

289243
type: SpeciesReference
stoichiometry: 1.0
species: 143999

145435
type: Reaction
product: 289026
product: 289014
reactant: 289002
reactant: 288990
notes: GENE_ASSOCIATION: 67 PROTEIN_ASSOCIATION: HepT SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.5.1.11
fast: false
reversible: false
name: R_trans_octaprenyltranstransferase

289026
type: SpeciesReference
stoichiometry: 1.0
species: 144639

289014
type: SpeciesReference
stoichiometry: 1.0
species: 144592

144592
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_all_trans_Nonaprenyl_diphosphate_C45H73O7P2

289002
type: SpeciesReference
stoichiometry: 1.0
species: 144601

288990
type: SpeciesReference
stoichiometry: 1.0
species: 144380

145178
type: Reaction
reversible: false
reactant: 278730
product: 278742
fast: false
reactant: 278718
product: 278766
reactant: 278706
name: R_glutamine_synthetase
product: 278754
product: 278779
notes: GENE_ASSOCIATION: ( 290 or 454 ) PROTEIN_ASSOCIATION: GlnA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.3.1.2

278730
type: SpeciesReference
stoichiometry: 1.0
species: 144582

278742
type: SpeciesReference
stoichiometry: 1.0
species: 144081

278718
type: SpeciesReference
stoichiometry: 1.0
species: 144300

278766
type: SpeciesReference
stoichiometry: 1.0
species: 144334

278706
type: SpeciesReference
stoichiometry: 1.0
species: 144126

278754
type: SpeciesReference
stoichiometry: 1.0
species: 144294

278779
type: SpeciesReference
stoichiometry: 1.0
species: 144630

144612
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Tetrchloroethene_C2Cl4

145002
type: Reaction
product: 273129
product: 273117
reactant: 273105
reactant: 273093
notes: GENE_ASSOCIATION: 124 PROTEIN_ASSOCIATION: LysA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.1.1.20
fast: false
reversible: false
name: R_diaminopimelate_decarboxylase

273129
type: SpeciesReference
stoichiometry: 1.0
species: 144400

273117
type: SpeciesReference
stoichiometry: 1.0
species: 144155

273105
type: SpeciesReference
stoichiometry: 1.0
species: 144334

273093
type: SpeciesReference
stoichiometry: 1.0
species: 143930

145042
type: Reaction
product: 274529
product: 274517
reactant: 274505
reactant: 274493
notes: GENE_ASSOCIATION: 67 PROTEIN_ASSOCIATION: IspA SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.5.1.1
fast: false
reversible: false
name: R_dimethylallyltranstransferase

274529
type: SpeciesReference
stoichiometry: 1.0
species: 144639

274517
type: SpeciesReference
stoichiometry: 1.0
species: 144318

274505
type: SpeciesReference
stoichiometry: 1.0
species: 144380

274493
type: SpeciesReference
stoichiometry: 1.0
species: 144226

145427
type: Reaction
product: 288748
reactant: 288688
reactant: 288700
name: R_nitrite_reductase__NADPH_
fast: false
reactant: 288712
notes: GENE_ASSOCIATION: 296 PROTEIN_ASSOCIATION: NasDE SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.7.1.4
reversible: false
product: 288736
product: 288724

288748
type: SpeciesReference
stoichiometry: 1.0
species: 144584

288688
type: SpeciesReference
stoichiometry: 4.0
species: 144334

288700
type: SpeciesReference
stoichiometry: 3.0
species: 144581

288712
type: SpeciesReference
stoichiometry: 1.0
species: 144591

288736
type: SpeciesReference
stoichiometry: 3.0
species: 144580

288724
type: SpeciesReference
stoichiometry: 1.0
species: 144330

145080
type: Reaction
product: 275565
reactant: 275553
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Glutamine_exchange

275565
type: SpeciesReference
stoichiometry: 1.0
species: 144800

275553
type: SpeciesReference
stoichiometry: 1.0
species: 144295

145499
type: Reaction
product: 291460
reactant: 291424
product: 291436
reactant: 291400
notes: GENE_ASSOCIATION: ( 181 and 182 and 183 and 184 ) PROTEIN_ASSOCIATION: Pfor SUBSYSTEM: S_Citrate_Cycle__TCA_ PROTEIN_CLASS: 1.2.7.1
reactant: 291412
reversible: true
name: R_pyruvate_synthase
product: 291472
fast: false
product: 291448

291460
type: SpeciesReference
stoichiometry: 2.0
species: 144259

291424
type: SpeciesReference
stoichiometry: 1.0
species: 144664

291436
type: SpeciesReference
stoichiometry: 1.0
species: 144058

291400
type: SpeciesReference
stoichiometry: 1.0
species: 144161

291412
type: SpeciesReference
stoichiometry: 2.0
species: 144256

291472
type: SpeciesReference
stoichiometry: 1.0
species: 144334

291448
type: SpeciesReference
stoichiometry: 1.0
species: 144155

145322
type: Reaction
reactant: 284522
notes: GENE_ASSOCIATION: 75 PROTEIN_ASSOCIATION: ManC SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.7.7.22
reactant: 284509
product: 284546
reactant: 284497
product: 284534
name: R_mannose_1_phosphate_guanylyltransferase__GDP_
fast: false
reversible: false

284522
type: SpeciesReference
stoichiometry: 1.0
species: 144407

284509
type: SpeciesReference
stoichiometry: 1.0
species: 144334

284546
type: SpeciesReference
stoichiometry: 1.0
species: 144630

284497
type: SpeciesReference
stoichiometry: 1.0
species: 144287

284534
type: SpeciesReference
stoichiometry: 1.0
species: 144288

145123
type: Reaction
product: 276560
reactant: 276548
reactant: 276536
notes: GENE_ASSOCIATION: ( 419 or 268 or 286 ) PROTEIN_ASSOCIATION: FadD SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 6.2.1.3
name: R_fatty_acid__CoA_ligase__tetradecanoate_
product: 276584
reactant: 276524
fast: false
product: 276572
reversible: true

276560
type: SpeciesReference
stoichiometry: 1.0
species: 144103

276548
type: SpeciesReference
stoichiometry: 1.0
species: 144746

276536
type: SpeciesReference
stoichiometry: 1.0
species: 144161

276584
type: SpeciesReference
stoichiometry: 1.0
species: 144698

276524
type: SpeciesReference
stoichiometry: 1.0
species: 144126

276572
type: SpeciesReference
stoichiometry: 1.0
species: 144639

144805
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_H2O_H2O

144983
type: Reaction
product: 272224
reactant: 272176
product: 272249
reversible: false
reactant: 272188
product: 272236
reactant: 272200
notes: GENE_ASSOCIATION: 366 PROTEIN_ASSOCIATION: PyrG SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 6.3.4.2
name: R_CTP_synthase__NH3_
product: 272212
fast: false

272224
type: SpeciesReference
stoichiometry: 1.0
species: 144174

272176
type: SpeciesReference
stoichiometry: 1.0
species: 144126

272249
type: SpeciesReference
stoichiometry: 1.0
species: 144630

272188
type: SpeciesReference
stoichiometry: 1.0
species: 144582

272236
type: SpeciesReference
stoichiometry: 2.0
species: 144334

272200
type: SpeciesReference
stoichiometry: 1.0
species: 144771

272212
type: SpeciesReference
stoichiometry: 1.0
species: 144081

145021
type: Reaction
product: 273768
notes: GENE_ASSOCIATION: 277 PROTEIN_ASSOCIATION: DapA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.2.1.52
fast: false
reversible: false
reactant: 273720
product: 273756
product: 273744
reactant: 273732
name: R_dihydrodipicolinate_synthase

273768
type: SpeciesReference
stoichiometry: 2.0
species: 144330

273720
type: SpeciesReference
stoichiometry: 1.0
species: 144123

273756
type: SpeciesReference
stoichiometry: 1.0
species: 144334

273744
type: SpeciesReference
stoichiometry: 1.0
species: 143922

273732
type: SpeciesReference
stoichiometry: 1.0
species: 144664

145117
type: Reaction
reversible: true
notes: GENE_ASSOCIATION: 339 PROTEIN_ASSOCIATION: FatB SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 3.1.2.14
reactant: 276269
product: 276293
reactant: 276281
fast: false
product: 276318
product: 276305
name: R_fatty_acyl_ACP_hydrolase

276269
type: SpeciesReference
stoichiometry: 1.0
species: 144330

276293
type: SpeciesReference
stoichiometry: 1.0
species: 144050

276281
type: SpeciesReference
stoichiometry: 1.0
species: 144607

276318
type: SpeciesReference
stoichiometry: 1.0
species: 144342

276305
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145102
type: Reaction
product: 275929
reactant: 275917
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Tetrchloroethene_exchange

275929
type: SpeciesReference
stoichiometry: 1.0
species: 144821

275917
type: SpeciesReference
stoichiometry: 1.0
species: 144612

145103
type: Reaction
product: 275953
reactant: 275941
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Phosphate_exchange

275953
type: SpeciesReference
stoichiometry: 1.0
species: 144822

144822
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_Phosphate_HO4P

275941
type: SpeciesReference
stoichiometry: 1.0
species: 144631

145265
type: Reaction
fast: false
reactant: 282132
name: R_3R__3_Hydroxytetradecanoyl_acyl_carrier_proteinNADP_oxidoreductase
product: 282168
product: 282156
reactant: 282120
notes: GENE_ASSOCIATION: ( 340 or 189 ) PROTEIN_ASSOCIATION: FabG1 SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.100
reactant: 282144
reversible: false

282132
type: SpeciesReference
stoichiometry: 1.0
species: 144334

282168
type: SpeciesReference
stoichiometry: 1.0
species: 144580

282156
type: SpeciesReference
stoichiometry: 1.0
species: 143995

282120
type: SpeciesReference
stoichiometry: 1.0
species: 144010

282144
type: SpeciesReference
stoichiometry: 1.0
species: 144581

145309
type: Reaction
product: 284001
reversible: true
reactant: 283977
reactant: 283965
product: 283989
product: 284013
fast: false
notes: GENE_ASSOCIATION: 96 PROTEIN_ASSOCIATION: Ldh SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 1.1.1.27
name: R_L_lactate_dehydrogenase

284001
type: SpeciesReference
stoichiometry: 1.0
species: 144579

283977
type: SpeciesReference
stoichiometry: 1.0
species: 144578

283965
type: SpeciesReference
stoichiometry: 1.0
species: 144388

144388
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Lactate_C3H5O3

283989
type: SpeciesReference
stoichiometry: 1.0
species: 144334

284013
type: SpeciesReference
stoichiometry: 1.0
species: 144664

145348
type: Reaction
product: 285584
fast: false
reactant: 285572
product: 285608
reversible: false
reactant: 285560
product: 285596
name: R_L_methionine_S_oxide_reductase__trdrd_
notes: GENE_ASSOCIATION: ( 438 or 330 ) PROTEIN_ASSOCIATION: MsrA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:

285584
type: SpeciesReference
stoichiometry: 1.0
species: 144330

285572
type: SpeciesReference
stoichiometry: 1.0
species: 144714

285608
type: SpeciesReference
stoichiometry: 1.0
species: 144712

285560
type: SpeciesReference
stoichiometry: 1.0
species: 144546

285596
type: SpeciesReference
stoichiometry: 1.0
species: 144410

144922
type: Reaction
notes: GENE_ASSOCIATION: 42 PROTEIN_ASSOCIATION: AsnA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.3.1.1
reactant: 269054
fast: false
product: 269066
reversible: false
product: 269091
reactant: 269042
product: 269079
product: 269103
reactant: 269030
name: R_asparagine_synthetase

269054
type: SpeciesReference
stoichiometry: 1.0
species: 144582

269066
type: SpeciesReference
stoichiometry: 1.0
species: 144103

269091
type: SpeciesReference
stoichiometry: 1.0
species: 144334

269042
type: SpeciesReference
stoichiometry: 1.0
species: 144126

269079
type: SpeciesReference
stoichiometry: 1.0
species: 144121

269103
type: SpeciesReference
stoichiometry: 1.0
species: 144639

269030
type: SpeciesReference
stoichiometry: 1.0
species: 144122

145601
type: Reaction
product: 295359
product: 295347
reactant: 295335
reactant: 295323
notes: GENE_ASSOCIATION: 320 PROTEIN_ASSOCIATION: ThrC SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.2.3.1
fast: false
reversible: false
name: R_threonine_synthase

295359
type: SpeciesReference
stoichiometry: 1.0
species: 144707

295347
type: SpeciesReference
stoichiometry: 1.0
species: 144630

295335
type: SpeciesReference
stoichiometry: 1.0
species: 144626

295323
type: SpeciesReference
stoichiometry: 1.0
species: 144330

144937
type: Reaction
product: 269646
product: 269634
reactant: 269622
reactant: 269610
notes: GENE_ASSOCIATION: ( 190 or 139 or 351 ) PROTEIN_ASSOCIATION: AspC SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.6.1.1
fast: false
reversible: true
name: R_aspartate_transaminase

269646
type: SpeciesReference
stoichiometry: 1.0
species: 144595

269634
type: SpeciesReference
stoichiometry: 1.0
species: 144300

269622
type: SpeciesReference
stoichiometry: 1.0
species: 144122

269610
type: SpeciesReference
stoichiometry: 1.0
species: 144091

144962
type: Reaction
product: 271391
reactant: 271379
notes: GENE_ASSOCIATION: ( 103 or 389 ) PROTEIN_ASSOCIATION: PheA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 5.4.99.5
fast: false
reversible: false
name: R_chorismate_mutase

271391
type: SpeciesReference
stoichiometry: 1.0
species: 144638

271379
type: SpeciesReference
stoichiometry: 1.0
species: 144145

145514
type: Reaction
product: 292125
product: 292113
reactant: 292100
reactant: 292088
notes: GENE_ASSOCIATION: 67 PROTEIN_ASSOCIATION: HepT SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.5.1.33
fast: false
reversible: false
name: R_trans_pentaprenyltranstransferase

292125
type: SpeciesReference
stoichiometry: 1.0
species: 144639

292113
type: SpeciesReference
stoichiometry: 1.0
species: 144347

292100
type: SpeciesReference
stoichiometry: 1.0
species: 144615

144615
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_all_trans_Pentaprenyl_diphosphate_C25H41O7P2

292088
type: SpeciesReference
stoichiometry: 1.0
species: 144380

145045
type: Reaction
fast: false
reactant: 274613
product: 274637
reversible: false
name: R_3_Dimethylubiquinonol_3_methyltransferase
notes: GENE_ASSOCIATION: 371 PROTEIN_ASSOCIATION: UbiG SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
product: 274661
reactant: 274625
product: 274649

274613
type: SpeciesReference
stoichiometry: 1.0
species: 143959

274637
type: SpeciesReference
stoichiometry: 1.0
species: 144086

274661
type: SpeciesReference
stoichiometry: 1.0
species: 144758

274625
type: SpeciesReference
stoichiometry: 1.0
species: 144101

274649
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145553
type: Reaction
product: 293621
product: 293608
reactant: 293584
reversible: false
fast: false
name: R_ribonucleoside_diphosphate_reductase__ADP_
reactant: 293572
product: 293596
notes: GENE_ASSOCIATION: ( 52 or 428 or 151 ) PROTEIN_ASSOCIATION: NrdEF SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 1.17.4.1

293621
type: SpeciesReference
stoichiometry: 1.0
species: 144712

293608
type: SpeciesReference
stoichiometry: 1.0
species: 144330

293584
type: SpeciesReference
stoichiometry: 1.0
species: 144714

293572
type: SpeciesReference
stoichiometry: 1.0
species: 144081

293596
type: SpeciesReference
stoichiometry: 1.0
species: 144183

145373
type: Reaction
product: 286477
reactant: 286465
notes: GENE_ASSOCIATION: ( ( 35 and 36 and 37 and 38 ) or ( 249 and 250 and 251 and 252 and 253 and 254 and 255 and 256 and 257 and 258 and 259 ) or 149 or ( 241 and 242 and 243 ) or 91 or ( 185 and 186 and 187 ) or ( 391 and 392 and 393 and 394 and 395 and 396 ) ) PROTEIN_ASSOCIATION: Nadhd5 SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.6.5.3
name: R_NADH_dehydrogenase__ubiquinone_8__35_protons_
reversible: false
reactant: 286441
fast: false
product: 286501
product: 286489
reactant: 286453

286477
type: SpeciesReference
stoichiometry: 1.0
species: 144578

286465
type: SpeciesReference
stoichiometry: 1.0
species: 144757

286441
type: SpeciesReference
stoichiometry: 4.5
species: 144334

286501
type: SpeciesReference
stoichiometry: 3.5
species: 144335

286489
type: SpeciesReference
stoichiometry: 1.0
species: 144758

286453
type: SpeciesReference
stoichiometry: 1.0
species: 144579

145085
type: Reaction
product: 275638
reactant: 275626
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_H2O_exchange

275638
type: SpeciesReference
stoichiometry: 1.0
species: 144805

275626
type: SpeciesReference
stoichiometry: 1.0
species: 144331

144331
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143911
name: M_H2O_H2O

144832
type: Reaction
notes: GENE_ASSOCIATION: 169 PROTEIN_ASSOCIATION: CobU SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
reactant: 265590
reactant: 265578
product: 265602
reactant: 265566
product: 265614
reversible: false
fast: false
name: R_Adenosyl_cobainamide_GTP_transferase

265590
type: SpeciesReference
stoichiometry: 1.0
species: 144334

265578
type: SpeciesReference
stoichiometry: 1.0
species: 144322

265602
type: SpeciesReference
stoichiometry: 1.0
species: 144077

265566
type: SpeciesReference
stoichiometry: 1.0
species: 144071

144071
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

265614
type: SpeciesReference
stoichiometry: 1.0
species: 144639

144871
type: Reaction
product: 267146
product: 267134
reactant: 267122
reactant: 267110
notes: GENE_ASSOCIATION: 311 PROTEIN_ASSOCIATION: Apt SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.4.2.7
fast: false
reversible: false
name: R_adenine_phosphoribosyltransferase

267146
type: SpeciesReference
stoichiometry: 1.0
species: 144639

267134
type: SpeciesReference
stoichiometry: 1.0
species: 144103

267122
type: SpeciesReference
stoichiometry: 1.0
species: 144656

267110
type: SpeciesReference
stoichiometry: 1.0
species: 144075

144872
type: Reaction
product: 267182
product: 267170
reactant: 267158
notes: GENE_ASSOCIATION: 228 PROTEIN_ASSOCIATION: PurB SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 4.3.2.2
fast: false
reversible: false
name: R_adenylosuccinate_lyase

267182
type: SpeciesReference
stoichiometry: 1.0
species: 144276

267170
type: SpeciesReference
stoichiometry: 1.0
species: 144103

267158
type: SpeciesReference
stoichiometry: 1.0
species: 144190

145039
type: Reaction
product: 274445
product: 274433
reactant: 274421
notes: GENE_ASSOCIATION: 108 PROTEIN_ASSOCIATION: AroD1 SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.2.1.10
fast: false
reversible: true
name: R_3_dehydroquinate_dehydratase

274445
type: SpeciesReference
stoichiometry: 1.0
species: 144330

274433
type: SpeciesReference
stoichiometry: 1.0
species: 143982

143982
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_3_Dehydroshikimate_C7H7O5

274421
type: SpeciesReference
stoichiometry: 1.0
species: 143981

144690
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

145333
type: Reaction
name: R_Tetradecanoyl_acyl_carrier_proteinmalonyl_acyl_carrier_protein__C_acyltransferase
product: 285004
notes: GENE_ASSOCIATION: 274 PROTEIN_ASSOCIATION: FabF SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.41
reactant: 284956
reactant: 284968
fast: false
reactant: 284943
product: 284992
reversible: false
product: 284980

285004
type: SpeciesReference
stoichiometry: 1.0
species: 144155

284956
type: SpeciesReference
stoichiometry: 1.0
species: 144403

284968
type: SpeciesReference
stoichiometry: 1.0
species: 144573

284943
type: SpeciesReference
stoichiometry: 1.0
species: 144334

284992
type: SpeciesReference
stoichiometry: 1.0
species: 144050

284980
type: SpeciesReference
stoichiometry: 1.0
species: 144005

145243
type: Reaction
reversible: false
product: 281362
notes: GENE_ASSOCIATION: 203 PROTEIN_ASSOCIATION: ThiE SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.7.1.49
product: 281374
reactant: 281325
reactant: 281337
name: R_hydroxymethylpyrimidine_kinase__ATP_
product: 281349
fast: false

281362
type: SpeciesReference
stoichiometry: 1.0
species: 144081

281374
type: SpeciesReference
stoichiometry: 1.0
species: 144334

281325
type: SpeciesReference
stoichiometry: 1.0
species: 144019

281337
type: SpeciesReference
stoichiometry: 1.0
species: 144126

281349
type: SpeciesReference
stoichiometry: 1.0
species: 144021

144948
type: Reaction
reactant: 270667
reversible: false
product: 270691
fast: false
notes: GENE_ASSOCIATION: 306 PROTEIN_ASSOCIATION: BioBec SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.8.1.6
product: 270703
product: 270715
name: R_Biotin_synthase
reactant: 270679

270667
type: SpeciesReference
stoichiometry: 1.0
species: 144230

270691
type: SpeciesReference
stoichiometry: 1.0
species: 144129

270703
type: SpeciesReference
stoichiometry: 1.0
species: 144334

270715
type: SpeciesReference
stoichiometry: 1.0
species: 144332

270679
type: SpeciesReference
stoichiometry: 2.0
species: 144675

145610
type: Reaction
product: 295782
product: 295770
reactant: 295758
reactant: 295746
notes: GENE_ASSOCIATION: 214 PROTEIN_ASSOCIATION: ThyA SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.1.1.45
fast: false
reversible: false
name: R_thymidylate_synthase

295782
type: SpeciesReference
stoichiometry: 1.0
species: 144234

295770
type: SpeciesReference
stoichiometry: 1.0
species: 144211

295758
type: SpeciesReference
stoichiometry: 1.0
species: 144554

295746
type: SpeciesReference
stoichiometry: 1.0
species: 144238

144986
type: Reaction
reactant: 272380
reactant: 272406
reversible: false
name: R_cob_I_yrinic_acid_a_c_diamide_adenosyltransferase
notes: GENE_ASSOCIATION: ( 429 or 326 or 301 ) PROTEIN_ASSOCIATION: CobA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.17
fast: false
reactant: 272393
product: 272431
product: 272419

272380
type: SpeciesReference
stoichiometry: 1.0
species: 144126

272406
type: SpeciesReference
stoichiometry: 1.0
species: 144334

272393
type: SpeciesReference
stoichiometry: 1.0
species: 144154

272431
type: SpeciesReference
stoichiometry: 1.0
species: 144643

272419
type: SpeciesReference
stoichiometry: 1.0
species: 144073

145579
type: Reaction
name: R_Seryl_tRNA_synthetase
product: 294528
reactant: 294492
reversible: false
product: 294552
reactant: 294504
fast: false
reactant: 294516
notes: GENE_ASSOCIATION: 140 PROTEIN_ASSOCIATION: SerS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.11
product: 294540

294528
type: SpeciesReference
stoichiometry: 1.0
species: 144103

294492
type: SpeciesReference
stoichiometry: 1.0
species: 144126

294552
type: SpeciesReference
stoichiometry: 1.0
species: 144678

294504
type: SpeciesReference
stoichiometry: 1.0
species: 144677

294516
type: SpeciesReference
stoichiometry: 1.0
species: 144734

294540
type: SpeciesReference
stoichiometry: 1.0
species: 144639

145162
type: Reaction
reactant: 278057
product: 278097
notes: GENE_ASSOCIATION: 342 PROTEIN_ASSOCIATION: ProA SUBSYSTEM: S_Amino_acid_Metabolism PROTEIN_CLASS: 1.2.1.41
name: R_glutamate_5_semialdehyde_dehydrogenase
reactant: 278083
reactant: 278070
product: 278110
reversible: false
fast: false
product: 278123

278057
type: SpeciesReference
stoichiometry: 1.0
species: 144298

278097
type: SpeciesReference
stoichiometry: 1.0
species: 144299

278083
type: SpeciesReference
stoichiometry: 1.0
species: 144581

278070
type: SpeciesReference
stoichiometry: 1.0
species: 144334

278110
type: SpeciesReference
stoichiometry: 1.0
species: 144580

278123
type: SpeciesReference
stoichiometry: 1.0
species: 144630

145450
type: Reaction
product: 289632
product: 289620
reactant: 289608
reactant: 289596
notes: GENE_ASSOCIATION: 124 PROTEIN_ASSOCIATION: SpeC SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.1.1.17
fast: false
reversible: false
name: R_ornithine_decarboxylase

289632
type: SpeciesReference
stoichiometry: 1.0
species: 144660

289620
type: SpeciesReference
stoichiometry: 1.0
species: 144155

289608
type: SpeciesReference
stoichiometry: 1.0
species: 144603

289596
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145237
type: Reaction
product: 281108
reactant: 281071
fast: false
reversible: false
name: R__3R__3_Hydroxyicosanoyl_acyl_carrier_proteinNADP_oxidoreductase
notes: GENE_ASSOCIATION: ( 340 or 189 ) PROTEIN_ASSOCIATION: FabG1 SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.100
reactant: 281084
reactant: 281096
product: 281120

281108
type: SpeciesReference
stoichiometry: 1.0
species: 143990

281071
type: SpeciesReference
stoichiometry: 1.0
species: 144006

281084
type: SpeciesReference
stoichiometry: 1.0
species: 144334

281096
type: SpeciesReference
stoichiometry: 1.0
species: 144581

281120
type: SpeciesReference
stoichiometry: 1.0
species: 144580

144908
type: Reaction
reversible: true
reactant: 268548
product: 268596
fast: false
name: R_adenosine_5__phosphosulfate_reductase
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
reactant: 268536
product: 268572
product: 268560
product: 268584

268548
type: SpeciesReference
stoichiometry: 1.0
species: 144714

268596
type: SpeciesReference
stoichiometry: 1.0
species: 144712

268536
type: SpeciesReference
stoichiometry: 1.0
species: 144110

268572
type: SpeciesReference
stoichiometry: 2.0
species: 144334

268560
type: SpeciesReference
stoichiometry: 1.0
species: 144103

268584
type: SpeciesReference
stoichiometry: 1.0
species: 144686

144857
type: Reaction
fast: false
product: 266615
reversible: false
reactant: 266591
reactant: 266603
product: 266651
product: 266639
name: R_adenosylcobinamide_phosphate_synthase
notes: GENE_ASSOCIATION: ( ( 430 or 300 ) or 164 ) PROTEIN_ASSOCIATION: ( CbiD ) or ( CbiB ) SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
reactant: 266578
product: 266627

266615
type: SpeciesReference
stoichiometry: 1.0
species: 144071

266591
type: SpeciesReference
stoichiometry: 1.0
species: 144074

266603
type: SpeciesReference
stoichiometry: 1.0
species: 144126

266651
type: SpeciesReference
stoichiometry: 1.0
species: 144630

266639
type: SpeciesReference
stoichiometry: 1.0
species: 144334

266578
type: SpeciesReference
stoichiometry: 1.0
species: 143919

266627
type: SpeciesReference
stoichiometry: 1.0
species: 144081

144858
type: Reaction
product: 266699
product: 266687
reactant: 266675
reactant: 266663
notes: GENE_ASSOCIATION: 373 PROTEIN_ASSOCIATION: PabABC SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_4_amino_4_deoxychorismate_synthase

266699
type: SpeciesReference
stoichiometry: 1.0
species: 144300

266687
type: SpeciesReference
stoichiometry: 1.0
species: 144018

266675
type: SpeciesReference
stoichiometry: 1.0
species: 144294

266663
type: SpeciesReference
stoichiometry: 1.0
species: 144145

144851
type: Reaction
notes: GENE_ASSOCIATION: 169 PROTEIN_ASSOCIATION: CobU SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
product: 266338
reactant: 266302
name: R_Adenosyl_cobinamide_kinase
product: 266326
reversible: false
reactant: 266314
product: 266350

266338
type: SpeciesReference
stoichiometry: 1.0
species: 144081

266302
type: SpeciesReference
stoichiometry: 1.0
species: 144070

266326
type: SpeciesReference
stoichiometry: 1.0
species: 144071

266314
type: SpeciesReference
stoichiometry: 1.0
species: 144126

266350
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145393
type: Reaction
product: 287367
product: 287354
reactant: 287342
reactant: 287330
notes: GENE_ASSOCIATION: 68 PROTEIN_ASSOCIATION: Ndk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.4.6
fast: false
reversible: true
name: R_nucleoside_diphosphate_kinase__ATPdGDP_

287367
type: SpeciesReference
stoichiometry: 1.0
species: 144208

287354
type: SpeciesReference
stoichiometry: 1.0
species: 144081

287342
type: SpeciesReference
stoichiometry: 1.0
species: 144204

287330
type: SpeciesReference
stoichiometry: 1.0
species: 144126

144897
type: Reaction
reactant: 268100
reversible: true
product: 268124
reactant: 268088
fast: false
product: 268136
notes: GENE_ASSOCIATION: ( 27 or 15 ) PROTEIN_ASSOCIATION: AdhC SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.1.1.1
product: 268112
name: R_alcohol_dehydrogenase__propanol_NAD_

268100
type: SpeciesReference
stoichiometry: 1.0
species: 144640

268124
type: SpeciesReference
stoichiometry: 1.0
species: 144579

268088
type: SpeciesReference
stoichiometry: 1.0
species: 144578

268136
type: SpeciesReference
stoichiometry: 1.0
species: 144635

144635
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Propanal_C3H6O

268112
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145276
type: Reaction
product: 282565
product: 282553
reactant: 282541
reactant: 282529
notes: GENE_ASSOCIATION: 5 PROTEIN_ASSOCIATION: IlvE SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.6.1.42
fast: false
reversible: true
name: R_isoleucine_transaminase

282565
type: SpeciesReference
stoichiometry: 1.0
species: 144300

282553
type: SpeciesReference
stoichiometry: 1.0
species: 143999

282541
type: SpeciesReference
stoichiometry: 1.0
species: 144371

282529
type: SpeciesReference
stoichiometry: 1.0
species: 144091

145519
type: Reaction
reactant: 292245
reactant: 292257
product: 292293
notes: GENE_ASSOCIATION: 368 PROTEIN_ASSOCIATION: PurM SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 6.3.3.1
fast: false
reversible: false
product: 292281
product: 292269
product: 292305
name: R_phosphoribosylaminoimidazole_synthetase

292245
type: SpeciesReference
stoichiometry: 1.0
species: 144126

292257
type: SpeciesReference
stoichiometry: 1.0
species: 144271

292293
type: SpeciesReference
stoichiometry: 1.0
species: 144334

292281
type: SpeciesReference
stoichiometry: 1.0
species: 144090

292269
type: SpeciesReference
stoichiometry: 1.0
species: 144081

292305
type: SpeciesReference
stoichiometry: 1.0
species: 144630

145474
type: Reaction
product: 290612
name: R_phosphoglycerate_dehydrogenase
reactant: 290576
product: 290600
reactant: 290588
fast: false
reversible: false
notes: GENE_ASSOCIATION: 145 PROTEIN_ASSOCIATION: SerA2 SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.1.1.95
product: 290624

290612
type: SpeciesReference
stoichiometry: 1.0
species: 144334

290576
type: SpeciesReference
stoichiometry: 1.0
species: 144011

290600
type: SpeciesReference
stoichiometry: 1.0
species: 144013

290588
type: SpeciesReference
stoichiometry: 1.0
species: 144578

290624
type: SpeciesReference
stoichiometry: 1.0
species: 144579

145141
type: Reaction
product: 277318
product: 277306
reactant: 277294
reactant: 277282
notes: GENE_ASSOCIATION: 411 PROTEIN_ASSOCIATION: Fmt SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.1.2.9
fast: false
reversible: false
name: R_Methionyl_tRNA_formyltransferase

277318
type: SpeciesReference
stoichiometry: 1.0
species: 144702

277306
type: SpeciesReference
stoichiometry: 1.0
species: 144266

277294
type: SpeciesReference
stoichiometry: 1.0
species: 144547

277282
type: SpeciesReference
stoichiometry: 1.0
species: 143913

145229
type: Reaction
product: 280865
product: 280853
reactant: 280841
notes: GENE_ASSOCIATION: 339 PROTEIN_ASSOCIATION: FabZ SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 4.2.1.58
fast: false
reversible: false
name: R__3R__3_Hydroxypalmitoyl_acyl_carrier_protein_hydro_lyase

280865
type: SpeciesReference
stoichiometry: 1.0
species: 144343

280853
type: SpeciesReference
stoichiometry: 1.0
species: 144330

280841
type: SpeciesReference
stoichiometry: 1.0
species: 143994

145222
type: Reaction
name: R_Hexadecanoyl_acyl_carrier_proteinmalonyl_CoA__C_acyltransferase
product: 280553
reactant: 280517
reversible: true
product: 280541
product: 280529
reactant: 280505
notes: GENE_ASSOCIATION: 338 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.3.1.10
fast: false

280553
type: SpeciesReference
stoichiometry: 1.0
species: 144579

280517
type: SpeciesReference
stoichiometry: 1.0
species: 144607

280541
type: SpeciesReference
stoichiometry: 1.0
species: 144343

280529
type: SpeciesReference
stoichiometry: 1.0
species: 144334

280505
type: SpeciesReference
stoichiometry: 1.0
species: 144578

145127
type: Reaction
notes: GENE_ASSOCIATION: ( 419 or 268 or 286 ) PROTEIN_ASSOCIATION: FadD SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 6.2.1.3
product: 276777
product: 276801
fast: false
reactant: 276741
reversible: true
product: 276789
reactant: 276753
reactant: 276765
name: R_fatty_acid__CoA_ligase__octadecanoate_

276777
type: SpeciesReference
stoichiometry: 1.0
species: 144103

276801
type: SpeciesReference
stoichiometry: 1.0
species: 144690

276741
type: SpeciesReference
stoichiometry: 1.0
species: 144126

276789
type: SpeciesReference
stoichiometry: 1.0
species: 144639

276753
type: SpeciesReference
stoichiometry: 1.0
species: 144161

276765
type: SpeciesReference
stoichiometry: 1.0
species: 144598

145453
type: Reaction
product: 289730
product: 289718
reactant: 289706
reactant: 289694
notes: GENE_ASSOCIATION: 331 PROTEIN_ASSOCIATION: ArgJ SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.3.1.35
fast: false
reversible: true
name: R_ornithine_transacetylase

289730
type: SpeciesReference
stoichiometry: 1.0
species: 144603

289718
type: SpeciesReference
stoichiometry: 1.0
species: 144063

289706
type: SpeciesReference
stoichiometry: 1.0
species: 144300

289694
type: SpeciesReference
stoichiometry: 1.0
species: 144066

144066
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N2_Acetyl_L_ornithine_C7H14N2O3

145468
type: Reaction
reactant: 290382
fast: false
name: R_phosphofructokinase
product: 290431
product: 290406
reactant: 290394
notes: GENE_ASSOCIATION: 355 PROTEIN_ASSOCIATION: PfkB SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 2.7.1.11
product: 290418
reversible: false

290382
type: SpeciesReference
stoichiometry: 1.0
species: 144126

290431
type: SpeciesReference
stoichiometry: 1.0
species: 144334

290406
type: SpeciesReference
stoichiometry: 1.0
species: 144081

290394
type: SpeciesReference
stoichiometry: 1.0
species: 144248

290418
type: SpeciesReference
stoichiometry: 1.0
species: 144258

145165
type: Reaction
product: 278248
fast: false
product: 278260
name: R_glyceraldehyde_3_phosphate_dehydrogenase__NAD_
notes: GENE_ASSOCIATION: 143 PROTEIN_ASSOCIATION: Gap SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 1.2.1.12
reversible: true
product: 278236
reactant: 278199
reactant: 278224
reactant: 278211

278248
type: SpeciesReference
stoichiometry: 1.0
species: 144334

278260
type: SpeciesReference
stoichiometry: 1.0
species: 144579

278236
type: SpeciesReference
stoichiometry: 1.0
species: 143917

278199
type: SpeciesReference
stoichiometry: 1.0
species: 144279

278224
type: SpeciesReference
stoichiometry: 1.0
species: 144630

278211
type: SpeciesReference
stoichiometry: 1.0
species: 144578

145208
type: Reaction
product: 280080
reactant: 280068
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_hydrogen_transport

280080
type: SpeciesReference
stoichiometry: 1.0
species: 144326

280068
type: SpeciesReference
stoichiometry: 1.0
species: 144324

144324
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_H2_H2

145493
type: Reaction
product: 291226
product: 291214
reactant: 291202
reactant: 291190
notes: GENE_ASSOCIATION: 361 PROTEIN_ASSOCIATION: Pmdpht SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_pyrimidine_phosphatase

291226
type: SpeciesReference
stoichiometry: 1.0
species: 144630

291214
type: SpeciesReference
stoichiometry: 1.0
species: 144034

291202
type: SpeciesReference
stoichiometry: 1.0
species: 144330

291190
type: SpeciesReference
stoichiometry: 1.0
species: 144037

145439
type: Reaction
reversible: false
product: 289231
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.2.1.25
product: 289219
product: 289207
reactant: 289195
name: R_2_oxoisovalerate_dehydrogenase__acylating_3_methyl_2_oxobutanoate_
fast: false
reactant: 289183
reactant: 289171

289231
type: SpeciesReference
stoichiometry: 1.0
species: 144579

289219
type: SpeciesReference
stoichiometry: 1.0
species: 144363

289207
type: SpeciesReference
stoichiometry: 1.0
species: 144155

289195
type: SpeciesReference
stoichiometry: 1.0
species: 144578

289183
type: SpeciesReference
stoichiometry: 1.0
species: 144161

289171
type: SpeciesReference
stoichiometry: 1.0
species: 143998

145408
type: Reaction
product: 287970
name: R_nicotinate_nucleotide_dimethylbenzimidazole_phosphoribosyltransferase
reversible: false
fast: false
product: 287946
product: 287958
notes: GENE_ASSOCIATION: 166 PROTEIN_ASSOCIATION: CobT SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.4.2.21
reactant: 287934
reactant: 287922

287970
type: SpeciesReference
stoichiometry: 1.0
species: 144577

287946
type: SpeciesReference
stoichiometry: 1.0
species: 144046

144046
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N1__5_Phospho_alpha_D_ribosyl__5_6_dimethylbenzimidazole_C14H17N2O7P

287958
type: SpeciesReference
stoichiometry: 1.0
species: 144334

287934
type: SpeciesReference
stoichiometry: 1.0
species: 144589

287922
type: SpeciesReference
stoichiometry: 1.0
species: 144223

145396
type: Reaction
product: 287464
product: 287452
reactant: 287440
reactant: 287428
notes: GENE_ASSOCIATION: 68 PROTEIN_ASSOCIATION: Ndk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.4.6
fast: false
reversible: true
name: R_nucleoside_diphosphate_kinase__ATPdCDP_

287464
type: SpeciesReference
stoichiometry: 1.0
species: 144195

287452
type: SpeciesReference
stoichiometry: 1.0
species: 144081

287440
type: SpeciesReference
stoichiometry: 1.0
species: 144192

287428
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145447
type: Reaction
name: R_2_oxoglutarate_synthase
reactant: 289500
product: 289536
reactant: 289476
product: 289548
notes: GENE_ASSOCIATION: ( 181 and 182 and 183 and 184 ) PROTEIN_ASSOCIATION: Ofo SUBSYSTEM: S_Citrate_Cycle__TCA_ PROTEIN_CLASS: 1.2.7.3
reactant: 289488
product: 289512
fast: false
reversible: true
product: 289524

289500
type: SpeciesReference
stoichiometry: 2.0
species: 144256

289536
type: SpeciesReference
stoichiometry: 1.0
species: 144334

289476
type: SpeciesReference
stoichiometry: 1.0
species: 144091

289548
type: SpeciesReference
stoichiometry: 1.0
species: 144692

289488
type: SpeciesReference
stoichiometry: 1.0
species: 144161

289512
type: SpeciesReference
stoichiometry: 1.0
species: 144155

289524
type: SpeciesReference
stoichiometry: 2.0
species: 144259

145639
type: Reaction
product: 296800
product: 296788
reactant: 296776
reactant: 296764
notes: GENE_ASSOCIATION: 61 PROTEIN_ASSOCIATION: PyrH SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_uridylate_kinase__UMP_

296800
type: SpeciesReference
stoichiometry: 1.0
species: 144761

296788
type: SpeciesReference
stoichiometry: 1.0
species: 144081

296776
type: SpeciesReference
stoichiometry: 1.0
species: 144765

296764
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145502
type: Reaction
product: 291569
product: 291557
reactant: 291545
reactant: 291533
notes: GENE_ASSOCIATION: ( 204 or 200 ) PROTEIN_ASSOCIATION: Ppa1 SUBSYSTEM: S_Transport PROTEIN_CLASS: 3.6.1.1
fast: false
reversible: false
name: R_inorganic_diphosphatase__one_proton_translocation_

291569
type: SpeciesReference
stoichiometry: 1.0
species: 144335

291557
type: SpeciesReference
stoichiometry: 2.0
species: 144630

291545
type: SpeciesReference
stoichiometry: 1.0
species: 144639

291533
type: SpeciesReference
stoichiometry: 1.0
species: 144330

145014
type: Reaction
product: 273539
product: 273527
reactant: 273515
reactant: 273503
notes: GENE_ASSOCIATION: ( 128 or 500 ) PROTEIN_ASSOCIATION: Dgt SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 3.1.5.1
fast: false
reversible: false
name: R_dGTPase

273539
type: SpeciesReference
stoichiometry: 1.0
species: 144643

273527
type: SpeciesReference
stoichiometry: 1.0
species: 144207

144207
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Deoxyguanosine_C10H13N5O4

273515
type: SpeciesReference
stoichiometry: 1.0
species: 144330

273503
type: SpeciesReference
stoichiometry: 1.0
species: 144208

145540
type: Reaction
product: 293086
reactant: 293050
name: R_pantetheine_phosphate_adenylyltransferase
reactant: 293074
reversible: true
reactant: 293062
product: 293098
fast: false
notes: GENE_ASSOCIATION: 43 PROTEIN_ASSOCIATION: CoaD SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.7.7.3

293086
type: SpeciesReference
stoichiometry: 1.0
species: 144228

293050
type: SpeciesReference
stoichiometry: 1.0
species: 144126

293074
type: SpeciesReference
stoichiometry: 1.0
species: 144608

293062
type: SpeciesReference
stoichiometry: 1.0
species: 144334

293098
type: SpeciesReference
stoichiometry: 1.0
species: 144639

145381
type: Reaction
product: 286827
reversible: false
notes: GENE_ASSOCIATION: 302 PROTEIN_ASSOCIATION: NadE SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 6.3.1.5
name: R_NAD_synthase__nh4_
reactant: 286779
reactant: 286803
product: 286851
reactant: 286791
product: 286839
product: 286815
fast: false

286827
type: SpeciesReference
stoichiometry: 1.0
species: 144334

286779
type: SpeciesReference
stoichiometry: 1.0
species: 144126

286803
type: SpeciesReference
stoichiometry: 1.0
species: 144582

286851
type: SpeciesReference
stoichiometry: 1.0
species: 144639

286791
type: SpeciesReference
stoichiometry: 1.0
species: 144227

286839
type: SpeciesReference
stoichiometry: 1.0
species: 144578

286815
type: SpeciesReference
stoichiometry: 1.0
species: 144103

145580
type: Reaction
notes: GENE_ASSOCIATION: 107 PROTEIN_ASSOCIATION: AroE1 SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.1.1.25
product: 294612
reactant: 294564
name: R_shikimate_dehdrogenase
fast: false
reversible: true
product: 294600
reactant: 294576
reactant: 294588

294612
type: SpeciesReference
stoichiometry: 1.0
species: 144682

294564
type: SpeciesReference
stoichiometry: 1.0
species: 143982

294600
type: SpeciesReference
stoichiometry: 1.0
species: 144580

294576
type: SpeciesReference
stoichiometry: 1.0
species: 144334

294588
type: SpeciesReference
stoichiometry: 1.0
species: 144581

144949
type: Reaction
name: R_Cobinamide_adenyltransferase
reactant: 270739
product: 270787
product: 270775
product: 270763
reactant: 270727
fast: false
notes: GENE_ASSOCIATION: ( 429 or 326 or 301 ) PROTEIN_ASSOCIATION: CobA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.17
reversible: true
reactant: 270751

270739
type: SpeciesReference
stoichiometry: 1.0
species: 144134

270787
type: SpeciesReference
stoichiometry: 1.0
species: 144639

270775
type: SpeciesReference
stoichiometry: 1.0
species: 144630

270763
type: SpeciesReference
stoichiometry: 1.0
species: 144070

270727
type: SpeciesReference
stoichiometry: 1.0
species: 144126

270751
type: SpeciesReference
stoichiometry: 1.0
species: 144330

144955
type: Reaction
notes: GENE_ASSOCIATION: ( ( ( 459 or 461 or 463 or 465 or 469 or 471 or 473 or 474 or 426 or 425 or 19 or 439 or 427 or 441 or 503 or 504 or 505 or 453 or 511 or 456 or 40 or 443 or 49 or 445 or 51 or 304 or 507 or 451 or 509 or 458 or 467 or 448 or 478 or 484 or 485 or 486 or 487 or 513 or 514 or 516 or 517 or 528 or 529 or 530 or 531 or 532 or 533 or 534 or 535 or 536 or 537 ) and ( 457 or 512 or 462 or 466 or 468 or 472 or 501 or 41 or 499 or 50 or 305 or 440 or 442 or 444 or 502 or 447 or 449 or 450 or 452 or 508 or 510 or 446 or 455 or 460 or 464 or 470 or 388 or 506 or 479 or 482 or 515 or 518 or 519 or 520 or 521 or 522 or 523 or 527 or 538 or 539 or 540 or 541 or 542 or 543 or 544 or 545 or 546 or 547 or 548 or 549 ) ) ) PROTEIN_ASSOCIATION: ( RdhA and RdhB ) or ( RdhA and RdhB ) SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS:
name: R_Chlorobenzene_reductive_dechlorination
reactant: 271077
product: 271101
product: 271089
reactant: 271052
reactant: 271065
reversible: false
fast: false
product: 271113

271077
type: SpeciesReference
stoichiometry: 1.0
species: 144336

271101
type: SpeciesReference
stoichiometry: 4.0
species: 144151

271089
type: SpeciesReference
stoichiometry: 8.0
species: 144256

271052
type: SpeciesReference
stoichiometry: 8.0
species: 144259

271065
type: SpeciesReference
stoichiometry: 4.0
species: 144334

271113
type: SpeciesReference
stoichiometry: 1.0
species: 144191

145526
type: Reaction
product: 292630
reactant: 292618
notes: GENE_ASSOCIATION: 348 PROTEIN_ASSOCIATION: HisA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 5.3.1.16
fast: false
reversible: true
name: R_1__5_phosphoribosyl__5__5_phosphoribosylamino_methylideneamino_imidazole_4_carboxamide_isomerase

292630
type: SpeciesReference
stoichiometry: 1.0
species: 144651

292618
type: SpeciesReference
stoichiometry: 1.0
species: 144650

144995
type: Reaction
name: R_Copper_transport_via_ABC_system
notes: GENE_ASSOCIATION: 271 PROTEIN_ASSOCIATION: Cudp SUBSYSTEM: S_Transport PROTEIN_CLASS:
reversible: false
reactant: 272780
fast: false
product: 272817
product: 272804
product: 272841
product: 272829
reactant: 272768
reactant: 272792

272780
type: SpeciesReference
stoichiometry: 1.0
species: 144330

272817
type: SpeciesReference
stoichiometry: 1.0
species: 144175

272804
type: SpeciesReference
stoichiometry: 1.0
species: 144081

272841
type: SpeciesReference
stoichiometry: 1.0
species: 144630

272829
type: SpeciesReference
stoichiometry: 1.0
species: 144334

272768
type: SpeciesReference
stoichiometry: 1.0
species: 144126

272792
type: SpeciesReference
stoichiometry: 1.0
species: 144177

145071
type: Reaction
product: 275421
reactant: 275409
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_CO2_exchange

275421
type: SpeciesReference
stoichiometry: 1.0
species: 144792

275409
type: SpeciesReference
stoichiometry: 1.0
species: 144157

145115
type: Reaction
product: 276257
product: 276233
fast: false
reactant: 276209
notes: GENE_ASSOCIATION: 339 PROTEIN_ASSOCIATION: FatB SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 3.1.2.14
name: R_fatty_acyl_ACP_hydrolase
product: 276245
reactant: 276221
reversible: true

276257
type: SpeciesReference
stoichiometry: 1.0
species: 144746

276233
type: SpeciesReference
stoichiometry: 1.0
species: 144050

276209
type: SpeciesReference
stoichiometry: 1.0
species: 144330

276245
type: SpeciesReference
stoichiometry: 1.0
species: 144334

276221
type: SpeciesReference
stoichiometry: 1.0
species: 144573

145360
type: Reaction
product: 286056
reactant: 286032
reversible: false
name: R_3_methyl_2_oxobutanoate_hydroxymethyltransferase
fast: false
reactant: 286020
reactant: 286008
notes: GENE_ASSOCIATION: 211 PROTEIN_ASSOCIATION: PanB SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.1.2.11
product: 286044

286056
type: SpeciesReference
stoichiometry: 1.0
species: 144702

286032
type: SpeciesReference
stoichiometry: 1.0
species: 144554

286020
type: SpeciesReference
stoichiometry: 1.0
species: 144330

286008
type: SpeciesReference
stoichiometry: 1.0
species: 143998

286044
type: SpeciesReference
stoichiometry: 1.0
species: 143941

144890
type: Reaction
product: 267833
product: 267821
reactant: 267809
reactant: 267796
notes: GENE_ASSOCIATION: 351 PROTEIN_ASSOCIATION: AlaT SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.6.1.2
fast: false
reversible: true
name: R_L_alanine_transaminase

267833
type: SpeciesReference
stoichiometry: 1.0
species: 144664

267821
type: SpeciesReference
stoichiometry: 1.0
species: 144300

267809
type: SpeciesReference
stoichiometry: 1.0
species: 144095

267796
type: SpeciesReference
stoichiometry: 1.0
species: 144091

145306
type: Reaction
reversible: false
product: 283868
reactant: 283844
name: R_b_ketoacyl_synthetase__n_C181_
product: 283904
product: 283856
product: 283892
reactant: 283820
fast: false
product: 283880
notes: GENE_ASSOCIATION: 338 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.41
reactant: 283832
reactant: 283808

283868
type: SpeciesReference
stoichiometry: 9.0
species: 144161

283844
type: SpeciesReference
stoichiometry: 15.0
species: 144581

283904
type: SpeciesReference
stoichiometry: 1.0
species: 144599

283856
type: SpeciesReference
stoichiometry: 8.0
species: 144155

283892
type: SpeciesReference
stoichiometry: 15.0
species: 144580

283820
type: SpeciesReference
stoichiometry: 22.0
species: 144334

283880
type: SpeciesReference
stoichiometry: 7.0
species: 144330

283832
type: SpeciesReference
stoichiometry: 8.0
species: 144406

283808
type: SpeciesReference
stoichiometry: 1.0
species: 144058

145277
type: Reaction
reactant: 282601
reactant: 282577
name: R_Isoleucyl_tRNA_synthetase
reversible: false
product: 282637
fast: false
reactant: 282589
product: 282625
notes: GENE_ASSOCIATION: 288 PROTEIN_ASSOCIATION: IleS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.5
product: 282613

282601
type: SpeciesReference
stoichiometry: 1.0
species: 144726

282577
type: SpeciesReference
stoichiometry: 1.0
species: 144126

282637
type: SpeciesReference
stoichiometry: 1.0
species: 144639

282589
type: SpeciesReference
stoichiometry: 1.0
species: 144371

282625
type: SpeciesReference
stoichiometry: 1.0
species: 144374

144374
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_L_Isoleucyl_tRNA_Ile__C6H13NO2X

282613
type: SpeciesReference
stoichiometry: 1.0
species: 144103

145591
type: Reaction
product: 295045
name: R_Tetradecanoyl_acyl_carrier_proteinmalonyl_CoA__C_acyltransferase
reactant: 295009
product: 295057
fast: false
product: 295033
reactant: 295021
reversible: true
notes: GENE_ASSOCIATION: 338 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.3.1.10

295045
type: SpeciesReference
stoichiometry: 1.0
species: 144579

295009
type: SpeciesReference
stoichiometry: 1.0
species: 144573

295057
type: SpeciesReference
stoichiometry: 1.0
species: 144699

295033
type: SpeciesReference
stoichiometry: 1.0
species: 144334

295021
type: SpeciesReference
stoichiometry: 1.0
species: 144578

144934
type: Reaction
product: 269550
fast: false
reversible: false
reactant: 269526
product: 269562
notes: GENE_ASSOCIATION: 420 PROTEIN_ASSOCIATION: NadB SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
name: R_L_aspartate_oxidase
reactant: 269514
product: 269538

269550
type: SpeciesReference
stoichiometry: 1.0
species: 144328

269526
type: SpeciesReference
stoichiometry: 1.0
species: 144594

269562
type: SpeciesReference
stoichiometry: 1.0
species: 144362

269514
type: SpeciesReference
stoichiometry: 1.0
species: 144122

269538
type: SpeciesReference
stoichiometry: 1.0
species: 144334

144935
type: Reaction
product: 269598
product: 269586
reactant: 269574
notes: GENE_ASSOCIATION: 335 PROTEIN_ASSOCIATION: AspA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.3.1.1
fast: false
reversible: false
name: R_L_aspartase

269598
type: SpeciesReference
stoichiometry: 1.0
species: 144582

269586
type: SpeciesReference
stoichiometry: 1.0
species: 144276

269574
type: SpeciesReference
stoichiometry: 1.0
species: 144122

145505
type: Reaction
product: 291677
reversible: false
fast: false
product: 291701
notes: GENE_ASSOCIATION: 92 PROTEIN_ASSOCIATION: YngE SUBSYSTEM: S_Carbohydrate_Metabolism PROTEIN_CLASS: 6.4.1.3
reactant: 291653
reactant: 291641
reactant: 291629
product: 291665
name: R_Propionyl_CoA_carboxylase
product: 291689

291677
type: SpeciesReference
stoichiometry: 1.0
species: 144334

291701
type: SpeciesReference
stoichiometry: 1.0
species: 144630

291653
type: SpeciesReference
stoichiometry: 1.0
species: 144636

291641
type: SpeciesReference
stoichiometry: 1.0
species: 144339

291629
type: SpeciesReference
stoichiometry: 1.0
species: 144126

291665
type: SpeciesReference
stoichiometry: 1.0
species: 144081

291689
type: SpeciesReference
stoichiometry: 1.0
species: 144556

144974
type: Reaction
reactant: 271716
product: 271765
reactant: 271729
name: R_cobalamin_5__phosphate_synthase
reversible: false
notes: GENE_ASSOCIATION: 167 PROTEIN_ASSOCIATION: CobS SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
product: 271741
product: 271753

271716
type: SpeciesReference
stoichiometry: 1.0
species: 144077

271765
type: SpeciesReference
stoichiometry: 1.0
species: 144334

271729
type: SpeciesReference
stoichiometry: 1.0
species: 144668

271741
type: SpeciesReference
stoichiometry: 1.0
species: 144165

271753
type: SpeciesReference
stoichiometry: 1.0
species: 144316

145174
type: Reaction
product: 278586
product: 278574
reactant: 278562
reactant: 278550
notes: GENE_ASSOCIATION: 9 PROTEIN_ASSOCIATION: Gmk SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 2.7.4.8
fast: false
reversible: true
name: R_guanylate_kinase__GMPATP_

278586
type: SpeciesReference
stoichiometry: 1.0
species: 144287

278574
type: SpeciesReference
stoichiometry: 1.0
species: 144081

278562
type: SpeciesReference
stoichiometry: 1.0
species: 144316

278550
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145097
type: Reaction
product: 275857
reactant: 275844
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_N2_exchange

275857
type: SpeciesReference
stoichiometry: 1.0
species: 144817

275844
type: SpeciesReference
stoichiometry: 1.0
species: 144576

144844
type: Reaction
product: 266062
product: 266049
reactant: 266037
reactant: 266025
notes: GENE_ASSOCIATION: 333 PROTEIN_ASSOCIATION: ArgD SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.6.1.11
fast: false
reversible: true
name: R_acetylornithine_transaminase

266062
type: SpeciesReference
stoichiometry: 1.0
species: 144300

266049
type: SpeciesReference
stoichiometry: 1.0
species: 144061

266037
type: SpeciesReference
stoichiometry: 1.0
species: 144091

266025
type: SpeciesReference
stoichiometry: 1.0
species: 144066

144884
type: Reaction
product: 267640
product: 267628
reactant: 267616
reactant: 267604
notes: GENE_ASSOCIATION: 227 PROTEIN_ASSOCIATION: PurE SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 4.1.1.21
fast: false
reversible: false
name: R_phosphoribosylaminoimidazole_carboxylase

267640
type: SpeciesReference
stoichiometry: 1.0
species: 144334

267628
type: SpeciesReference
stoichiometry: 1.0
species: 144035

267616
type: SpeciesReference
stoichiometry: 1.0
species: 144155

267604
type: SpeciesReference
stoichiometry: 1.0
species: 144090

145288
type: Reaction
name: R_1_hydroxy_2_methyl_2__E__butenyl_4_diphosphate_reductase__ipdp_
reactant: 283104
reversible: false
product: 283141
fast: false
notes: GENE_ASSOCIATION: 353 PROTEIN_ASSOCIATION: LytB SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
product: 283166
reactant: 283129
product: 283153
reactant: 283116

283104
type: SpeciesReference
stoichiometry: 1.0
species: 144334

283141
type: SpeciesReference
stoichiometry: 1.0
species: 144330

283166
type: SpeciesReference
stoichiometry: 1.0
species: 144578

283129
type: SpeciesReference
stoichiometry: 1.0
species: 144579

283153
type: SpeciesReference
stoichiometry: 1.0
species: 144380

283116
type: SpeciesReference
stoichiometry: 1.0
species: 144327

145255
type: Reaction
notes: GENE_ASSOCIATION: 402 PROTEIN_ASSOCIATION: FolK SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.7.6.3
product: 281784
reactant: 281772
fast: false
reactant: 281760
product: 281808
name: R_2_amino_4_hydroxy_6_hydroxymethyldihydropteridine_diphosphokinase
product: 281796
reversible: false

281784
type: SpeciesReference
stoichiometry: 1.0
species: 143933

281772
type: SpeciesReference
stoichiometry: 1.0
species: 144126

281760
type: SpeciesReference
stoichiometry: 1.0
species: 143934

281808
type: SpeciesReference
stoichiometry: 1.0
species: 144334

281796
type: SpeciesReference
stoichiometry: 1.0
species: 144103

145378
type: Reaction
notes: GENE_ASSOCIATION: 101 PROTEIN_ASSOCIATION: NadK SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.7.1.23
reactant: 286671
fast: false
product: 286683
product: 286695
product: 286707
reactant: 286659
reversible: false
name: R_NAD_kinase

286671
type: SpeciesReference
stoichiometry: 1.0
species: 144578

286683
type: SpeciesReference
stoichiometry: 1.0
species: 144081

286695
type: SpeciesReference
stoichiometry: 1.0
species: 144334

286707
type: SpeciesReference
stoichiometry: 1.0
species: 144580

286659
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145622
type: Reaction
product: 296247
product: 296235
reactant: 296223
reactant: 296211
notes: GENE_ASSOCIATION: 231 PROTEIN_ASSOCIATION: HisC SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.6.1.5
fast: false
reversible: true
name: R_tyrosine_transaminase

296247
type: SpeciesReference
stoichiometry: 1.0
species: 144300

296235
type: SpeciesReference
stoichiometry: 1.0
species: 143974

296223
type: SpeciesReference
stoichiometry: 1.0
species: 144748

296211
type: SpeciesReference
stoichiometry: 1.0
species: 144091

144998
type: Reaction
product: 272937
reactant: 272913
product: 272925
reversible: false
reactant: 272901
notes: GENE_ASSOCIATION: 77 PROTEIN_ASSOCIATION: DgkA SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.7.1.107
name: R_diacylglycerol_kinase
fast: false
product: 272949

272937
type: SpeciesReference
stoichiometry: 1.0
species: 144081

272913
type: SpeciesReference
stoichiometry: 1.0
species: 144126

272925
type: SpeciesReference
stoichiometry: 1.0
species: 143914

272901
type: SpeciesReference
stoichiometry: 1.0
species: 143915

272949
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145153
type: Reaction
product: 277755
reactant: 277743
reactant: 277731
notes: GENE_ASSOCIATION: ( 98 and 97 ) PROTEIN_ASSOCIATION: ( FumB and TtdA ) SUBSYSTEM: S_Citrate_Cycle__TCA_ PROTEIN_CLASS: 4.2.1.2
fast: false
reversible: true
name: R_fumarase

277755
type: SpeciesReference
stoichiometry: 1.0
species: 144404

277743
type: SpeciesReference
stoichiometry: 1.0
species: 144330

277731
type: SpeciesReference
stoichiometry: 1.0
species: 144276

145198
type: Reaction
product: 279706
product: 279730
name: R_GMP_synthase__glutamine_hydrolysing_
reactant: 279682
reactant: 279670
notes: GENE_ASSOCIATION: 225 PROTEIN_ASSOCIATION: GuaA SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 6.3.5.2
reactant: 279658
product: 279694
product: 279742
reversible: false
fast: false
reactant: 279646
product: 279718

279706
type: SpeciesReference
stoichiometry: 1.0
species: 144300

279730
type: SpeciesReference
stoichiometry: 2.0
species: 144334

279682
type: SpeciesReference
stoichiometry: 1.0
species: 144776

279670
type: SpeciesReference
stoichiometry: 1.0
species: 144330

279658
type: SpeciesReference
stoichiometry: 1.0
species: 144294

279694
type: SpeciesReference
stoichiometry: 1.0
species: 144103

279742
type: SpeciesReference
stoichiometry: 1.0
species: 144639

279646
type: SpeciesReference
stoichiometry: 1.0
species: 144126

279718
type: SpeciesReference
stoichiometry: 1.0
species: 144316

145486
type: Reaction
product: 290961
product: 290949
reactant: 290937
reactant: 290925
notes: GENE_ASSOCIATION: 231 PROTEIN_ASSOCIATION: HisC SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.6.1.58
fast: false
reversible: true
name: R_phenylalanine_transaminase

290961
type: SpeciesReference
stoichiometry: 1.0
species: 144627

290949
type: SpeciesReference
stoichiometry: 1.0
species: 144300

290937
type: SpeciesReference
stoichiometry: 1.0
species: 144622

290925
type: SpeciesReference
stoichiometry: 1.0
species: 144091

145234
type: Reaction
reversible: false
notes: GENE_ASSOCIATION: ( 340 or 189 ) PROTEIN_ASSOCIATION: FabG1 SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.100
fast: false
reactant: 280998
name: R__3R__3_Hydroxyhexanoyl_acyl_carrier_proteinNADP_oxidoreductase
product: 281010
product: 281022
reactant: 280974
reactant: 280986

280998
type: SpeciesReference
stoichiometry: 1.0
species: 144581

281010
type: SpeciesReference
stoichiometry: 1.0
species: 143989

281022
type: SpeciesReference
stoichiometry: 1.0
species: 144580

280974
type: SpeciesReference
stoichiometry: 1.0
species: 144003

280986
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145480
type: Reaction
product: 290780
reactant: 290768
notes: GENE_ASSOCIATION: ( 372 or ( 408 or 193 ) ) PROTEIN_ASSOCIATION: ( GpmA ) or ( Pgml ) SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 5.4.2.1
fast: false
reversible: true
name: R_phosphoglycerate_mutase

290780
type: SpeciesReference
stoichiometry: 1.0
species: 143965

290768
type: SpeciesReference
stoichiometry: 1.0
species: 144011

145235
type: Reaction
product: 281058
product: 281046
reactant: 281034
notes: GENE_ASSOCIATION: 339 PROTEIN_ASSOCIATION: FabZ SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 4.2.1.58
fast: false
reversible: false
name: R__3R__3_Hydroxyicosanoyl_acyl_carrier_protein_hydro_lyase

281058
type: SpeciesReference
stoichiometry: 1.0
species: 144330

281046
type: SpeciesReference
stoichiometry: 1.0
species: 143970

281034
type: SpeciesReference
stoichiometry: 1.0
species: 143990

145249
type: Reaction
product: 281592
product: 281579
reactant: 281567
notes: GENE_ASSOCIATION: 339 PROTEIN_ASSOCIATION: FabZ SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 4.2.1.58
fast: false
reversible: false
name: R___3R__3_Hydroxybutanoyl_acyl_carrier_protein_hydro_lyase

281592
type: SpeciesReference
stoichiometry: 1.0
species: 144330

281579
type: SpeciesReference
stoichiometry: 1.0
species: 143973

281567
type: SpeciesReference
stoichiometry: 1.0
species: 143991

144182
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_5__Deoxyadenosine_C10H13N5O3

144855
type: Reaction
product: 266565
product: 266552
reactant: 266540
reactant: 266526
notes: GENE_ASSOCIATION: 413 PROTEIN_ASSOCIATION: CbiZ SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 3.5.1
fast: false
reversible: true
name: R_Adenosylcobinamide_hydrolase

266565
type: SpeciesReference
stoichiometry: 1.0
species: 144330

266552
type: SpeciesReference
stoichiometry: 1.0
species: 144070

266540
type: SpeciesReference
stoichiometry: 1.0
species: 144074

266526
type: SpeciesReference
stoichiometry: 1.0
species: 143918

144863
type: Reaction
product: 266844
product: 266832
reactant: 266820
reactant: 266808
notes: GENE_ASSOCIATION: 111 PROTEIN_ASSOCIATION: Adk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.4.3
fast: false
reversible: true
name: R_adenylate_kinase__Inorganic_triphosphate_

266844
type: SpeciesReference
stoichiometry: 1.0
species: 144639

266832
type: SpeciesReference
stoichiometry: 1.0
species: 144081

266820
type: SpeciesReference
stoichiometry: 1.0
species: 144643

266808
type: SpeciesReference
stoichiometry: 1.0
species: 144103

145402
type: Reaction
notes: GENE_ASSOCIATION: ( 495 or 489 or 490 or 491 or 492 or 493 or 494 ) PROTEIN_ASSOCIATION: Nif SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.18.6.1
reactant: 287633
product: 287669
reactant: 287609
product: 287681
reactant: 287596
product: 287705
reversible: true
product: 287693
product: 287645
reactant: 287621
product: 287657
name: R_nitrogenase
fast: false

287633
type: SpeciesReference
stoichiometry: 1.0
species: 144575

287669
type: SpeciesReference
stoichiometry: 6.0
species: 144334

287609
type: SpeciesReference
stoichiometry: 8.0
species: 144259

287681
type: SpeciesReference
stoichiometry: 1.0
species: 144324

287596
type: SpeciesReference
stoichiometry: 16.0
species: 144126

287705
type: SpeciesReference
stoichiometry: 16.0
species: 144630

287693
type: SpeciesReference
stoichiometry: 2.0
species: 144582

287645
type: SpeciesReference
stoichiometry: 16.0
species: 144081

287621
type: SpeciesReference
stoichiometry: 16.0
species: 144330

287657
type: SpeciesReference
stoichiometry: 8.0
species: 144256

145646
type: Reaction
product: 297102
product: 297090
reactant: 297078
reactant: 297066
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_Lumped_reaction_for_degradation_of_glycoaldehyde

297102
type: SpeciesReference
stoichiometry: 1.0
species: 144330

297090
type: SpeciesReference
stoichiometry: 1.0
species: 144058

297078
type: SpeciesReference
stoichiometry: 1.0
species: 144286

297066
type: SpeciesReference
stoichiometry: 1.0
species: 144161

145177
type: Reaction
reversible: false
name: R_glucose_1_phosphate_adenylyltransferase
product: 278694
fast: false
product: 278682
reactant: 278658
reactant: 278646
notes: GENE_ASSOCIATION: ( 215 or 89 or 322 or 481 ) PROTEIN_ASSOCIATION: GlgC SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 2.7.7.27
reactant: 278670

278694
type: SpeciesReference
stoichiometry: 1.0
species: 144639

278682
type: SpeciesReference
stoichiometry: 1.0
species: 144082

278658
type: SpeciesReference
stoichiometry: 1.0
species: 144278

278646
type: SpeciesReference
stoichiometry: 1.0
species: 144126

278670
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145001
type: Reaction
name: R_LL_Diaminopimelate_aminotransferase
reactant: 273033
product: 273057
product: 273045
reversible: true
notes: GENE_ASSOCIATION: 190 PROTEIN_ASSOCIATION: DapAT SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
fast: false
reactant: 273021
product: 273081
product: 273069

273033
type: SpeciesReference
stoichiometry: 1.0
species: 144091

273057
type: SpeciesReference
stoichiometry: 1.0
species: 144334

273045
type: SpeciesReference
stoichiometry: 1.0
species: 144300

273021
type: SpeciesReference
stoichiometry: 1.0
species: 143929

273081
type: SpeciesReference
stoichiometry: 1.0
species: 144700

273069
type: SpeciesReference
stoichiometry: 1.0
species: 144330

144849
type: Reaction
product: 266290
product: 266278
product: 266266
reactant: 266254
notes: GENE_ASSOCIATION: 373 PROTEIN_ASSOCIATION: PabABC SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_4_aminobenzoate_synthase

266290
type: SpeciesReference
stoichiometry: 1.0
species: 144664

266278
type: SpeciesReference
stoichiometry: 1.0
species: 144334

266266
type: SpeciesReference
stoichiometry: 1.0
species: 144017

266254
type: SpeciesReference
stoichiometry: 1.0
species: 144018

144251
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Iso_C170_CoA_C38H64N7O17P3S1

145139
type: Reaction
product: 277270
product: 277258
reactant: 277246
reactant: 277234
notes: GENE_ASSOCIATION: 199 PROTEIN_ASSOCIATION: Def SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 3.5.1.31
fast: false
reversible: false
name: R_formylmethionine_deformylase

277270
type: SpeciesReference
stoichiometry: 1.0
species: 144410

277258
type: SpeciesReference
stoichiometry: 1.0
species: 144270

277246
type: SpeciesReference
stoichiometry: 1.0
species: 144330

277234
type: SpeciesReference
stoichiometry: 1.0
species: 144264

144264
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_N_Formyl_L_methionine_C6H10NO3S

145426
type: Reaction
notes: GENE_ASSOCIATION: 296 PROTEIN_ASSOCIATION: NasDE SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.7.1.4
reactant: 288640
reactant: 288628
product: 288664
name: R_nitrite_reductase__NADH_
fast: false
reversible: false
reactant: 288616
product: 288652
product: 288676

288640
type: SpeciesReference
stoichiometry: 1.0
species: 144591

288628
type: SpeciesReference
stoichiometry: 3.0
species: 144579

288664
type: SpeciesReference
stoichiometry: 3.0
species: 144578

288616
type: SpeciesReference
stoichiometry: 4.0
species: 144334

288652
type: SpeciesReference
stoichiometry: 1.0
species: 144330

288676
type: SpeciesReference
stoichiometry: 1.0
species: 144584

145465
type: Reaction
product: 290261
notes: GENE_ASSOCIATION: 418 PROTEIN_ASSOCIATION: PdxHec SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 1.4.3.5
reactant: 290225
product: 290237
reversible: true
reactant: 290213
name: R_pyridoxine_5__phosphate_oxidase
product: 290249
fast: false

290261
type: SpeciesReference
stoichiometry: 1.0
species: 144663

290225
type: SpeciesReference
stoichiometry: 1.0
species: 144614

290237
type: SpeciesReference
stoichiometry: 1.0
species: 144334

290213
type: SpeciesReference
stoichiometry: 1.0
species: 144594

290249
type: SpeciesReference
stoichiometry: 1.0
species: 144328

145466
type: Reaction
reversible: false
fast: false
product: 290310
product: 290346
notes: GENE_ASSOCIATION: 64 PROTEIN_ASSOCIATION: PdxAJ SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
reactant: 290298
name: R_Pyridoxine_5__phosphate_synthase
product: 290322
product: 290358
reactant: 290273
reactant: 290285
product: 290370
product: 290334

290310
type: SpeciesReference
stoichiometry: 1.0
species: 144155

290346
type: SpeciesReference
stoichiometry: 1.0
species: 144579

290298
type: SpeciesReference
stoichiometry: 1.0
species: 144628

290322
type: SpeciesReference
stoichiometry: 1.0
species: 144334

290358
type: SpeciesReference
stoichiometry: 1.0
species: 144614

290273
type: SpeciesReference
stoichiometry: 1.0
species: 144240

290285
type: SpeciesReference
stoichiometry: 1.0
species: 144578

290370
type: SpeciesReference
stoichiometry: 1.0
species: 144630

290334
type: SpeciesReference
stoichiometry: 2.0
species: 144330

144246
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Ethanol_C2H6O

144904
type: Reaction
product: 268403
product: 268416
product: 268428
reactant: 268378
notes: GENE_ASSOCIATION: ( 373 and 374 ) PROTEIN_ASSOCIATION: ( TrpE and TrpG ) SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 4.1.3.27
name: R_anthranilate_synthase
product: 268440
reversible: false
reactant: 268391
fast: false

268403
type: SpeciesReference
stoichiometry: 1.0
species: 144105

268416
type: SpeciesReference
stoichiometry: 1.0
species: 144300

268428
type: SpeciesReference
stoichiometry: 1.0
species: 144334

268378
type: SpeciesReference
stoichiometry: 1.0
species: 144145

268440
type: SpeciesReference
stoichiometry: 1.0
species: 144664

268391
type: SpeciesReference
stoichiometry: 1.0
species: 144294

144942
type: Reaction
product: 269878
reactant: 269854
fast: false
reversible: true
reactant: 269866
name: R_ATPase
notes: GENE_ASSOCIATION: ( 130 and 131 and 132 and 133 and 134 and 135 and 136 and 137 ) PROTEIN_ASSOCIATION: AtpABCDEFGHI SUBSYSTEM: S_Transport PROTEIN_CLASS:
product: 269891
product: 269903
reactant: 269842

269878
type: SpeciesReference
stoichiometry: 1.0
species: 144126

269854
type: SpeciesReference
stoichiometry: 1.0
species: 144630

269866
type: SpeciesReference
stoichiometry: 3.0
species: 144335

269891
type: SpeciesReference
stoichiometry: 2.0
species: 144334

269903
type: SpeciesReference
stoichiometry: 1.0
species: 144330

269842
type: SpeciesReference
stoichiometry: 1.0
species: 144081

144348
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Mercury__uncharged__Hg

144982
type: Reaction
product: 272152
product: 272116
notes: GENE_ASSOCIATION: 236 PROTEIN_ASSOCIATION: HemN SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
product: 272092
name: R_Oxygen_Independent_coproporphyrinogen_III_oxidase
reactant: 272068
reactant: 272044
reversible: false
reactant: 272056
product: 272164
reactant: 272080
product: 272128
product: 272140
product: 272104
fast: false

272152
type: SpeciesReference
stoichiometry: 2.0
species: 144580

272116
type: SpeciesReference
stoichiometry: 4.0
species: 144259

272092
type: SpeciesReference
stoichiometry: 2.0
species: 144155

272068
type: SpeciesReference
stoichiometry: 4.0
species: 144256

272044
type: SpeciesReference
stoichiometry: 2.0
species: 144101

272056
type: SpeciesReference
stoichiometry: 1.0
species: 144173

272164
type: SpeciesReference
stoichiometry: 1.0
species: 144642

272080
type: SpeciesReference
stoichiometry: 2.0
species: 144581

272128
type: SpeciesReference
stoichiometry: 2.0
species: 144334

272140
type: SpeciesReference
stoichiometry: 2.0
species: 144410

272104
type: SpeciesReference
stoichiometry: 2.0
species: 144182

145020
type: Reaction
reactant: 273684
name: R_dihydrodipicolinate_reductase__NADPH_
notes: GENE_ASSOCIATION: 275 PROTEIN_ASSOCIATION: DapB SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.3.1.26
fast: false
reversible: false
product: 273696
product: 273708
reactant: 273660
reactant: 273672

273684
type: SpeciesReference
stoichiometry: 1.0
species: 144581

273696
type: SpeciesReference
stoichiometry: 1.0
species: 144580

273708
type: SpeciesReference
stoichiometry: 1.0
species: 144700

273660
type: SpeciesReference
stoichiometry: 1.0
species: 143922

273672
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145108
type: Reaction
product: 276026
reactant: 276014
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Thiosulfate_exchange

276026
type: SpeciesReference
stoichiometry: 1.0
species: 144826

276014
type: SpeciesReference
stoichiometry: 1.0
species: 144745

145307
type: Reaction
product: 283953
product: 283940
reactant: 283928
reactant: 283916
notes: GENE_ASSOCIATION: ( 180 or 406 ) PROTEIN_ASSOCIATION: ( KefC2 ) or ( KefC ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_potassium_transport_inout_via_proton_symport

283953
type: SpeciesReference
stoichiometry: 1.0
species: 144384

283940
type: SpeciesReference
stoichiometry: 1.0
species: 144334

283928
type: SpeciesReference
stoichiometry: 1.0
species: 144386

283916
type: SpeciesReference
stoichiometry: 1.0
species: 144335

145607
type: Reaction
product: 295672
product: 295660
reactant: 295648
reactant: 295636
notes: GENE_ASSOCIATION: 160 PROTEIN_ASSOCIATION: TktB SUBSYSTEM: S_Pentose_Phosphate_Pathway PROTEIN_CLASS: 2.2.1.1
fast: false
reversible: true
name: R_transketolase

295672
type: SpeciesReference
stoichiometry: 1.0
species: 144279

295660
type: SpeciesReference
stoichiometry: 1.0
species: 144248

295648
type: SpeciesReference
stoichiometry: 1.0
species: 144779

295636
type: SpeciesReference
stoichiometry: 1.0
species: 144242

144928
type: Reaction
fast: false
reactant: 269284
product: 269308
reversible: false
product: 269320
product: 269296
name: R_L_aspartate_oxidase
reactant: 269272
notes: GENE_ASSOCIATION: 420 PROTEIN_ASSOCIATION: NadB SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:

269284
type: SpeciesReference
stoichiometry: 1.0
species: 144578

269308
type: SpeciesReference
stoichiometry: 1.0
species: 144362

269320
type: SpeciesReference
stoichiometry: 1.0
species: 144579

269296
type: SpeciesReference
stoichiometry: 2.0
species: 144334

269272
type: SpeciesReference
stoichiometry: 1.0
species: 144122

145592
type: Reaction
product: 295093
product: 295081
reactant: 295069
notes: GENE_ASSOCIATION: 354 PROTEIN_ASSOCIATION: AgaZ SUBSYSTEM: S_Carbohydrate_Metabolism PROTEIN_CLASS: 4.1.2.40
fast: false
reversible: true
name: R_Tagatose_bisphosphate_aldolase

295093
type: SpeciesReference
stoichiometry: 1.0
species: 144279

295081
type: SpeciesReference
stoichiometry: 1.0
species: 144210

295069
type: SpeciesReference
stoichiometry: 1.0
species: 144696

144290
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912

144967
type: Reaction
product: 271548
product: 271536
reactant: 271524
reactant: 271512
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_citrate_transport_inout_via_proton_symport

271548
type: SpeciesReference
stoichiometry: 1.0
species: 144334

271536
type: SpeciesReference
stoichiometry: 1.0
species: 144146

271524
type: SpeciesReference
stoichiometry: 1.0
species: 144335

271512
type: SpeciesReference
stoichiometry: 1.0
species: 144147

144968
type: Reaction
reversible: false
notes: GENE_ASSOCIATION: 279 PROTEIN_ASSOCIATION: Cls SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS:
product: 271608
fast: false
product: 271584
reactant: 271572
reactant: 271560
product: 271596
name: R_cardiolipin_synthetase

271608
type: SpeciesReference
stoichiometry: 1.0
species: 144334

271584
type: SpeciesReference
stoichiometry: 1.0
species: 144141

271572
type: SpeciesReference
stoichiometry: 1.0
species: 144618

271560
type: SpeciesReference
stoichiometry: 1.0
species: 144143

271596
type: SpeciesReference
stoichiometry: 1.0
species: 144153

144961
type: Reaction
product: 271355
product: 271367
fast: false
reactant: 271307
name: R_Chloroethene_reductive_dechlorination
reactant: 271319
notes: GENE_ASSOCIATION: ( ( ( 459 or 461 or 463 or 465 or 469 or 471 or 473 or 474 or 426 or 425 or 19 or 439 or 427 or 441 or 503 or 504 or 505 or 453 or 511 or 456 or 40 or 443 or 49 or 445 or 51 or 304 or 507 or 451 or 509 or 458 or 467 or 448 or 478 or 484 or 485 or 486 or 487 or 513 or 514 or 516 or 517 or 528 or 529 or 530 or 531 or 532 or 533 or 534 or 535 or 536 or 537 ) and ( 457 or 512 or 462 or 466 or 468 or 472 or 501 or 41 or 499 or 50 or 305 or 440 or 442 or 444 or 502 or 447 or 449 or 450 or 452 or 508 or 510 or 446 or 455 or 460 or 464 or 470 or 388 or 506 or 479 or 482 or 515 or 518 or 519 or 520 or 521 or 522 or 523 or 527 or 538 or 539 or 540 or 541 or 542 or 543 or 544 or 545 or 546 or 547 or 548 or 549 ) ) ) PROTEIN_ASSOCIATION: ( RdhA and RdhB ) or ( RdhA and RdhB ) SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS:
reversible: false
product: 271343
reactant: 271331

271355
type: SpeciesReference
stoichiometry: 4.0
species: 144151

271367
type: SpeciesReference
stoichiometry: 1.0
species: 144244

271307
type: SpeciesReference
stoichiometry: 8.0
species: 144259

271319
type: SpeciesReference
stoichiometry: 4.0
species: 144334

271343
type: SpeciesReference
stoichiometry: 8.0
species: 144256

271331
type: SpeciesReference
stoichiometry: 1.0
species: 144612

145552
type: Reaction
product: 293560
product: 293548
reactant: 293536
reactant: 293524
notes: GENE_ASSOCIATION: 168 PROTEIN_ASSOCIATION: CobC SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_alpha_ribazole_5_phosphatase

293560
type: SpeciesReference
stoichiometry: 1.0
species: 144668

293548
type: SpeciesReference
stoichiometry: 1.0
species: 144630

293536
type: SpeciesReference
stoichiometry: 1.0
species: 144330

293524
type: SpeciesReference
stoichiometry: 1.0
species: 144046

145059
type: Reaction
product: 275228
product: 275216
reactant: 275204
notes: GENE_ASSOCIATION: 144 PROTEIN_ASSOCIATION: Eno SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 4.2.1.11
fast: false
reversible: true
name: R_enolase

275228
type: SpeciesReference
stoichiometry: 1.0
species: 144616

275216
type: SpeciesReference
stoichiometry: 1.0
species: 144330

275204
type: SpeciesReference
stoichiometry: 1.0
species: 143965

145083
type: Reaction
product: 275614
reactant: 275601
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_H2_exchange

275614
type: SpeciesReference
stoichiometry: 1.0
species: 144803

275601
type: SpeciesReference
stoichiometry: 1.0
species: 144326

145372
type: Reaction
product: 286417
reactant: 286393
fast: false
reactant: 286405
product: 286429
notes: GENE_ASSOCIATION: ( ( 35 and 36 and 37 and 38 ) or ( 249 and 250 and 251 and 252 and 253 and 254 and 255 and 256 and 257 and 258 and 259 ) or 149 or ( 241 and 242 and 243 ) or 91 or ( 185 and 186 and 187 ) or ( 391 and 392 and 393 and 394 and 395 and 396 ) ) PROTEIN_ASSOCIATION: Nadhd5 SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.6.5.3
reactant: 286381
reversible: false
name: R_NADH_dehydrogenase__Menaquinone_7__no_proton_

286417
type: SpeciesReference
stoichiometry: 1.0
species: 144562

286393
type: SpeciesReference
stoichiometry: 1.0
species: 144564

286405
type: SpeciesReference
stoichiometry: 1.0
species: 144579

286429
type: SpeciesReference
stoichiometry: 1.0
species: 144578

286381
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145289
type: Reaction
name: R_3_isopropylmalate_dehydrogenase
reactant: 283191
reversible: false
reactant: 283178
product: 283204
product: 283216
product: 283228
fast: false
notes: GENE_ASSOCIATION: 217 PROTEIN_ASSOCIATION: LeuB SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.1.1.85

283191
type: SpeciesReference
stoichiometry: 1.0
species: 144578

283178
type: SpeciesReference
stoichiometry: 1.0
species: 143977

283204
type: SpeciesReference
stoichiometry: 1.0
species: 143979

283216
type: SpeciesReference
stoichiometry: 1.0
species: 144334

283228
type: SpeciesReference
stoichiometry: 1.0
species: 144579

145006
type: Reaction
product: 273250
name: R_dCMP_deaminase
fast: false
reactant: 273214
reactant: 273226
reversible: false
notes: GENE_ASSOCIATION: 76 PROTEIN_ASSOCIATION: ComEB SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 3.5.4.12
product: 273262
reactant: 273238

273250
type: SpeciesReference
stoichiometry: 1.0
species: 144238

273214
type: SpeciesReference
stoichiometry: 1.0
species: 144194

273226
type: SpeciesReference
stoichiometry: 1.0
species: 144334

273262
type: SpeciesReference
stoichiometry: 1.0
species: 144582

273238
type: SpeciesReference
stoichiometry: 1.0
species: 144330

145538
type: Reaction
product: 293038
product: 293026
reactant: 293014
notes: GENE_ASSOCIATION: 403 PROTEIN_ASSOCIATION: Ptps SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 4.2.3.12
fast: false
reversible: false
name: R_6_pyruvoyltetrahydropterin_synthase

293038
type: SpeciesReference
stoichiometry: 1.0
species: 144643

293026
type: SpeciesReference
stoichiometry: 1.0
species: 144047

293014
type: SpeciesReference
stoichiometry: 1.0
species: 144087

145160
type: Reaction
product: 278044
product: 278032
product: 278020
reactant: 278008
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_glutamate_5_semialdehyde_dehydratase__spontaneous_

278044
type: SpeciesReference
stoichiometry: 1.0
species: 144330

278032
type: SpeciesReference
stoichiometry: 1.0
species: 144334

278020
type: SpeciesReference
stoichiometry: 1.0
species: 143921

278008
type: SpeciesReference
stoichiometry: 1.0
species: 144299

145532
type: Reaction
product: 292858
product: 292846
reactant: 292834
reactant: 292822
notes: GENE_ASSOCIATION: 105 PROTEIN_ASSOCIATION: AroA SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.5.1.19
fast: false
reversible: true
name: R_3_phosphoshikimate_1_carboxyvinyltransferase

292858
type: SpeciesReference
stoichiometry: 1.0
species: 144630

292846
type: SpeciesReference
stoichiometry: 1.0
species: 144014

292834
type: SpeciesReference
stoichiometry: 1.0
species: 144681

292822
type: SpeciesReference
stoichiometry: 1.0
species: 144616

145204
type: Reaction
product: 279984
fast: false
product: 279960
notes: GENE_ASSOCIATION: 2 PROTEIN_ASSOCIATION: RelA SUBSYSTEM: S_Pentose_Phosphate_Pathway PROTEIN_CLASS: 2.7.6.5
reactant: 279936
product: 279972
reversible: false
reactant: 279948
name: R_GTP_diphosphokinase

279984
type: SpeciesReference
stoichiometry: 1.0
species: 144334

279960
type: SpeciesReference
stoichiometry: 1.0
species: 144103

279936
type: SpeciesReference
stoichiometry: 1.0
species: 144126

279972
type: SpeciesReference
stoichiometry: 1.0
species: 144290

279948
type: SpeciesReference
stoichiometry: 1.0
species: 144322

144907
type: Reaction
reactant: 268488
name: R_5_amino_6__5_phosphoribosylamino_uracil_reductase
product: 268524
product: 268512
reactant: 268476
fast: false
notes: GENE_ASSOCIATION: 310 PROTEIN_ASSOCIATION: RibD SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 1.1.1.193
reversible: false
reactant: 268500

268488
type: SpeciesReference
stoichiometry: 1.0
species: 144334

268524
type: SpeciesReference
stoichiometry: 1.0
species: 144580

268512
type: SpeciesReference
stoichiometry: 1.0
species: 144037

268476
type: SpeciesReference
stoichiometry: 1.0
species: 144038

268500
type: SpeciesReference
stoichiometry: 1.0
species: 144581

145403
type: Reaction
fast: false
notes: GENE_ASSOCIATION: ( ( 382 or 138 or 436 ) and ( 383 or 435 ) and ( 384 or 434 ) and ( 385 or 433 ) and ( 432 or 386 ) ) PROTEIN_ASSOCIATION: ( NikA and NikB and NikC and NikD and NikE ) SUBSYSTEM: S_Transport PROTEIN_CLASS:
name: R_nickel_transport_via_ABC_system
product: 287777
reactant: 287717
product: 287789
reversible: false
product: 287753
reactant: 287741
product: 287765
reactant: 287729

287777
type: SpeciesReference
stoichiometry: 1.0
species: 144586

287717
type: SpeciesReference
stoichiometry: 1.0
species: 144126

287789
type: SpeciesReference
stoichiometry: 1.0
species: 144630

287753
type: SpeciesReference
stoichiometry: 1.0
species: 144081

287741
type: SpeciesReference
stoichiometry: 1.0
species: 144587

287765
type: SpeciesReference
stoichiometry: 1.0
species: 144334

287729
type: SpeciesReference
stoichiometry: 1.0
species: 144330

145391
type: Reaction
product: 287318
product: 287306
reactant: 287294
reactant: 287282
notes: GENE_ASSOCIATION: 68 PROTEIN_ASSOCIATION: Ndk SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.7.4.6
fast: false
reversible: true
name: R_nucleoside_diphosphate_kinase__ATPdTDP_

287318
type: SpeciesReference
stoichiometry: 1.0
species: 144235

287306
type: SpeciesReference
stoichiometry: 1.0
species: 144081

287294
type: SpeciesReference
stoichiometry: 1.0
species: 144231

287282
type: SpeciesReference
stoichiometry: 1.0
species: 144126

144896
type: Reaction
reactant: 268040
reactant: 268028
fast: false
product: 268076
product: 268052
name: R_alcohol_dehydrogenase__ethanol_NAD_
reversible: true
product: 268064
notes: GENE_ASSOCIATION: ( 27 or 15 ) PROTEIN_ASSOCIATION: AdhC SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.1.1.1

268040
type: SpeciesReference
stoichiometry: 1.0
species: 144578

268028
type: SpeciesReference
stoichiometry: 1.0
species: 144246

268076
type: SpeciesReference
stoichiometry: 1.0
species: 144579

268052
type: SpeciesReference
stoichiometry: 1.0
species: 144057

268064
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145318
type: Reaction
product: 284352
product: 284376
notes: GENE_ASSOCIATION: ( 141 or 247 ) PROTEIN_ASSOCIATION: LysS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.6
name: R_Lysyl_tRNA_synthetase
reactant: 284328
reactant: 284340
fast: false
reversible: false
reactant: 284315
product: 284364

284352
type: SpeciesReference
stoichiometry: 1.0
species: 144103

284376
type: SpeciesReference
stoichiometry: 1.0
species: 144639

284328
type: SpeciesReference
stoichiometry: 1.0
species: 144400

284340
type: SpeciesReference
stoichiometry: 1.0
species: 144729

284315
type: SpeciesReference
stoichiometry: 1.0
species: 144126

284364
type: SpeciesReference
stoichiometry: 1.0
species: 144402

144131
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_cAMP_C10H11N5O6P

145640
type: Reaction
product: 296849
product: 296837
reactant: 296824
reactant: 296812
notes: GENE_ASSOCIATION: 61 PROTEIN_ASSOCIATION: PyrH SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_uridylate_kinase__dUMP_

296849
type: SpeciesReference
stoichiometry: 1.0
species: 144236

296837
type: SpeciesReference
stoichiometry: 1.0
species: 144081

296824
type: SpeciesReference
stoichiometry: 1.0
species: 144238

296812
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145634
type: Reaction
fast: false
reactant: 296632
reversible: false
product: 296644
notes: GENE_ASSOCIATION: 412 PROTEIN_ASSOCIATION: HemD SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.1.1.107
product: 296656
reactant: 296620
product: 296668
name: R_uroporphyrinogen_methyltransferase

296632
type: SpeciesReference
stoichiometry: 1.0
species: 144767

296644
type: SpeciesReference
stoichiometry: 2.0
species: 144086

296656
type: SpeciesReference
stoichiometry: 2.0
species: 144334

296620
type: SpeciesReference
stoichiometry: 2.0
species: 144101

296668
type: SpeciesReference
stoichiometry: 1.0
species: 144679

145517
type: Reaction
product: 292233
reactant: 292221
notes: GENE_ASSOCIATION: 377 PROTEIN_ASSOCIATION: TrpF SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 5.3.1.24
fast: false
reversible: true
name: R_phosphoribosylanthranilate_isomerase

292233
type: SpeciesReference
stoichiometry: 1.0
species: 143938

292221
type: SpeciesReference
stoichiometry: 1.0
species: 144646

145147
type: Reaction
product: 277536
product: 277524
reactant: 277512
reactant: 277500
notes: GENE_ASSOCIATION: ( ( ( 44 and 47 ) or 37 or 187 or 243 or 488 ) or ( ( 238 and 239 and 240 and 245 and 246 ) or ( 20 and 21 and 22 and 23 ) or 150 or 483 ) ) PROTEIN_ASSOCIATION: ( Fdx ) or ( FrdH ) SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.12.7
fast: false
reversible: true
name: R_Ferredoxin_hydrogenase

277536
type: SpeciesReference
stoichiometry: 2.0
species: 144335

277524
type: SpeciesReference
stoichiometry: 2.0
species: 144259

277512
type: SpeciesReference
stoichiometry: 1.0
species: 144326

277500
type: SpeciesReference
stoichiometry: 2.0
species: 144256

145171
type: Reaction
product: 278478
product: 278466
reactant: 278454
reactant: 278442
notes: GENE_ASSOCIATION: 67 PROTEIN_ASSOCIATION: HepT SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_geranylgeranyltranstransferase

278478
type: SpeciesReference
stoichiometry: 1.0
species: 144639

278466
type: SpeciesReference
stoichiometry: 1.0
species: 144615

278454
type: SpeciesReference
stoichiometry: 1.0
species: 144380

278442
type: SpeciesReference
stoichiometry: 1.0
species: 144291

145228
type: Reaction
product: 280817
product: 280805
fast: false
reversible: true
reactant: 280793
name: R_mercury_II__reductase
reactant: 280781
notes: GENE_ASSOCIATION: 188 PROTEIN_ASSOCIATION: MerA SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 1.16.1.1
product: 280829

280817
type: SpeciesReference
stoichiometry: 1.0
species: 144348

280805
type: SpeciesReference
stoichiometry: 1.0
species: 144334

280793
type: SpeciesReference
stoichiometry: 1.0
species: 144581

280781
type: SpeciesReference
stoichiometry: 1.0
species: 144350

280829
type: SpeciesReference
stoichiometry: 1.0
species: 144580

145186
type: Reaction
notes: GENE_ASSOCIATION: 367 PROTEIN_ASSOCIATION: PurF SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 2.4.2.14
reactant: 279129
name: R_glutamine_phosphoribosyldiphosphate_amidotransferase
reactant: 279117
product: 279141
product: 279153
fast: false
reactant: 279104
product: 279165
reversible: false

279129
type: SpeciesReference
stoichiometry: 1.0
species: 144656

279117
type: SpeciesReference
stoichiometry: 1.0
species: 144330

279141
type: SpeciesReference
stoichiometry: 1.0
species: 144300

279153
type: SpeciesReference
stoichiometry: 1.0
species: 144639

279104
type: SpeciesReference
stoichiometry: 1.0
species: 144294

279165
type: SpeciesReference
stoichiometry: 1.0
species: 144644

144836
type: Reaction
reversible: false
fast: false
product: 265796
notes: GENE_ASSOCIATION: ( 331 or ( 100 or 119 ) ) PROTEIN_ASSOCIATION: ( ArgJ ) or ( ArgA ) SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 2.3.1.1
name: R_N_acetylglutamate_synthase
reactant: 265772
reactant: 265760
product: 265784
product: 265809

265796
type: SpeciesReference
stoichiometry: 1.0
species: 144161

265772
type: SpeciesReference
stoichiometry: 1.0
species: 144300

265760
type: SpeciesReference
stoichiometry: 1.0
species: 144058

265784
type: SpeciesReference
stoichiometry: 1.0
species: 144063

265809
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145126
type: Reaction
name: R_fatty_acid__CoA_ligase__Iso_C170_
reversible: true
product: 276729
reactant: 276681
reactant: 276693
fast: false
notes: GENE_ASSOCIATION: ( 419 or 268 or 286 ) PROTEIN_ASSOCIATION: FadD SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 6.2.1.3
reactant: 276668
product: 276705
product: 276717

276729
type: SpeciesReference
stoichiometry: 1.0
species: 144639

276681
type: SpeciesReference
stoichiometry: 1.0
species: 144161

276693
type: SpeciesReference
stoichiometry: 1.0
species: 144250

276668
type: SpeciesReference
stoichiometry: 1.0
species: 144126

276705
type: SpeciesReference
stoichiometry: 1.0
species: 144103

276717
type: SpeciesReference
stoichiometry: 1.0
species: 144251

144875
type: Reaction
reactant: 267242
reversible: false
name: R_adenylosuccinate_synthetase
product: 267266
product: 267302
product: 267290
reactant: 267254
notes: GENE_ASSOCIATION: 278 PROTEIN_ASSOCIATION: PurA SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 6.3.4.4
product: 267278
fast: false
reactant: 267230

267242
type: SpeciesReference
stoichiometry: 1.0
species: 144322

267266
type: SpeciesReference
stoichiometry: 1.0
species: 144190

267302
type: SpeciesReference
stoichiometry: 1.0
species: 144630

267290
type: SpeciesReference
stoichiometry: 2.0
species: 144334

267254
type: SpeciesReference
stoichiometry: 1.0
species: 144376

267278
type: SpeciesReference
stoichiometry: 1.0
species: 144287

267230
type: SpeciesReference
stoichiometry: 1.0
species: 144122

144881
type: Reaction
product: 267520
notes: GENE_ASSOCIATION: 201 PROTEIN_ASSOCIATION: ThiC SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS:
reversible: false
reactant: 267484
reactant: 267496
fast: false
product: 267508
product: 267544
product: 267532
name: R_4_amino_5_hydroxymethyl_2_methylpyrimidine_synthetase

267520
type: SpeciesReference
stoichiometry: 1.0
species: 144286

267484
type: SpeciesReference
stoichiometry: 1.0
species: 144090

267496
type: SpeciesReference
stoichiometry: 1.0
species: 144330

267508
type: SpeciesReference
stoichiometry: 1.0
species: 144019

267544
type: SpeciesReference
stoichiometry: 1.0
species: 144630

267532
type: SpeciesReference
stoichiometry: 0.5
species: 144594

145459
type: Reaction
reactant: 289900
product: 289948
name: R_phenylacetate_CoA_ligase
reactant: 289912
product: 289936
fast: false
product: 289960
reactant: 289924
notes: GENE_ASSOCIATION: ( 262 or 285 ) PROTEIN_ASSOCIATION: PaaK SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 6.2.1.30
reversible: false

289900
type: SpeciesReference
stoichiometry: 1.0
species: 144126

289948
type: SpeciesReference
stoichiometry: 1.0
species: 144620

289912
type: SpeciesReference
stoichiometry: 1.0
species: 144161

289936
type: SpeciesReference
stoichiometry: 1.0
species: 144103

289960
type: SpeciesReference
stoichiometry: 1.0
species: 144639

289924
type: SpeciesReference
stoichiometry: 1.0
species: 144623

144623
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 143912
name: M_Phenylacetate_C8H7O2

145414
type: Reaction
reactant: 288152
fast: false
name: R_Nucleoside_triphosphate_pyrophosphorylase__gtp_
notes: GENE_ASSOCIATION: 409 PROTEIN_ASSOCIATION: MazG SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS:
reversible: false
reactant: 288140
product: 288164
product: 288176
product: 288188

288152
type: SpeciesReference
stoichiometry: 1.0
species: 144330

288140
type: SpeciesReference
stoichiometry: 1.0
species: 144322

288164
type: SpeciesReference
stoichiometry: 1.0
species: 144316

288176
type: SpeciesReference
stoichiometry: 1.0
species: 144334

288188
type: SpeciesReference
stoichiometry: 1.0
species: 144639

145207
type: Reaction
product: 280056
reactant: 280044
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport PROTEIN_CLASS:
fast: false
reversible: true
name: R_H2O_transport_via_diffusion

280056
type: SpeciesReference
stoichiometry: 1.0
species: 144330

280044
type: SpeciesReference
stoichiometry: 1.0
species: 144331

145498
type: Reaction
name: R_pantothenate_kinase
fast: false
product: 291376
reactant: 291340
reactant: 291352
notes: GENE_ASSOCIATION: 83 PROTEIN_ASSOCIATION: CoaA SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.7.1.33
product: 291388
product: 291364
reversible: false

291376
type: SpeciesReference
stoichiometry: 1.0
species: 144081

291340
type: SpeciesReference
stoichiometry: 1.0
species: 144126

291352
type: SpeciesReference
stoichiometry: 1.0
species: 144634

291388
type: SpeciesReference
stoichiometry: 1.0
species: 144334

291364
type: SpeciesReference
stoichiometry: 1.0
species: 144031

145247
type: Reaction
reactant: 281507
fast: false
reactant: 281519
reversible: false
product: 281543
notes: GENE_ASSOCIATION: 203 PROTEIN_ASSOCIATION: ThiE SUBSYSTEM: S_Cofactor_and_Prostehtic_Group_Biosynthesis PROTEIN_CLASS: 2.7.1.49
name: R_hydroxymethylpyrimidine_kinase__GTP_
product: 281555
product: 281531

281507
type: SpeciesReference
stoichiometry: 1.0
species: 144019

281519
type: SpeciesReference
stoichiometry: 1.0
species: 144322

281543
type: SpeciesReference
stoichiometry: 1.0
species: 144287

281555
type: SpeciesReference
stoichiometry: 1.0
species: 144334

281531
type: SpeciesReference
stoichiometry: 1.0
species: 144021

145492
type: Reaction
product: 291178
reactant: 291166
notes: GENE_ASSOCIATION: ( 114 or 120 ) PROTEIN_ASSOCIATION: Pmgm1 SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 5.4.2.8
fast: false
reversible: true
name: R_phosphomannomutase

291178
type: SpeciesReference
stoichiometry: 1.0
species: 144408

291166
type: SpeciesReference
stoichiometry: 1.0
species: 144407

144867
type: Reaction
product: 266977
product: 266965
reactant: 266953
notes: GENE_ASSOCIATION: 152 PROTEIN_ASSOCIATION: CyaA SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 4.6.1.1
fast: false
reversible: false
name: R_adenylate_cyclase

266977
type: SpeciesReference
stoichiometry: 1.0
species: 144639

266965
type: SpeciesReference
stoichiometry: 1.0
species: 144131

266953
type: SpeciesReference
stoichiometry: 1.0
species: 144126

145438
type: Reaction
fast: false
product: 289159
product: 289147
reactant: 289099
product: 289135
reversible: true
name: R_2_oxoisovalerate_dehydrogenase__acylating_4_methyl_2_oxopentaoate_
reactant: 289111
reactant: 289123
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.2.1.25

289159
type: SpeciesReference
stoichiometry: 1.0
species: 144579

289147
type: SpeciesReference
stoichiometry: 1.0
species: 144383

289099
type: SpeciesReference
stoichiometry: 1.0
species: 144026

289135
type: SpeciesReference
stoichiometry: 1.0
species: 144155

289111
type: SpeciesReference
stoichiometry: 1.0
species: 144161

289123
type: SpeciesReference
stoichiometry: 1.0
species: 144578

145478
type: Reaction
product: 290756
product: 290744
reactant: 290732
reactant: 290720
notes: GENE_ASSOCIATION: 194 PROTEIN_ASSOCIATION: Pgk SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 2.7.2.3
fast: false
reversible: true
name: R_phosphoglycerate_kinase

290756
type: SpeciesReference
stoichiometry: 1.0
species: 144126

290744
type: SpeciesReference
stoichiometry: 1.0
species: 144011

290732
type: SpeciesReference
stoichiometry: 1.0
species: 144081

290720
type: SpeciesReference
stoichiometry: 1.0
species: 143917

145189
type: Reaction
product: 279309
name: R_glutamate_synthase__NADPH_
reactant: 279261
reactant: 279285
reactant: 279273
product: 279297
reactant: 279249
reversible: false
fast: false
notes: GENE_ASSOCIATION: ( ( 26 or 295 or 244 ) or ( ( 292 and 293 ) or 11 ) ) PROTEIN_ASSOCIATION: ( GltB ) or ( GltBD ) SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 1.4.1.13

279309
type: SpeciesReference
stoichiometry: 1.0
species: 144580

279261
type: SpeciesReference
stoichiometry: 1.0
species: 144294

279285
type: SpeciesReference
stoichiometry: 1.0
species: 144581

279273
type: SpeciesReference
stoichiometry: 1.0
species: 144334

279297
type: SpeciesReference
stoichiometry: 2.0
species: 144300

279249
type: SpeciesReference
stoichiometry: 1.0
species: 144091

145501
type: Reaction
product: 291521
product: 291509
reactant: 291497
reactant: 291484
notes: GENE_ASSOCIATION: 55 PROTEIN_ASSOCIATION: Ppa SUBSYSTEM: S_Energy_Metabolism PROTEIN_CLASS: 3.6.1.1
fast: false
reversible: false
name: R_inorganic_diphosphatase

291521
type: SpeciesReference
stoichiometry: 2.0
species: 144630

291509
type: SpeciesReference
stoichiometry: 1.0
species: 144334

291497
type: SpeciesReference
stoichiometry: 1.0
species: 144639

291484
type: SpeciesReference
stoichiometry: 1.0
species: 144330

145053
type: Reaction
reactant: 274963
product: 274999
reactant: 274951
product: 274975
name: R_dUTP_diphosphatase
reversible: false
fast: false
notes: GENE_ASSOCIATION: 78 PROTEIN_ASSOCIATION: Dutec SUBSYSTEM: S_Nucleotide_Metabolism PROTEIN_CLASS: 3.6.1.23
product: 274987

274963
type: SpeciesReference
stoichiometry: 1.0
species: 144330

274999
type: SpeciesReference
stoichiometry: 1.0
species: 144639

274951
type: SpeciesReference
stoichiometry: 1.0
species: 144239

274975
type: SpeciesReference
stoichiometry: 1.0
species: 144238

274987
type: SpeciesReference
stoichiometry: 1.0
species: 144334

145091
type: Reaction
product: 275759
reactant: 275747
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Leucine_exchange

275759
type: SpeciesReference
stoichiometry: 1.0
species: 144811

275747
type: SpeciesReference
stoichiometry: 1.0
species: 144392

145334
type: Reaction
reactant: 285016
product: 285076
product: 285052
reactant: 285040
fast: false
product: 285064
notes: GENE_ASSOCIATION: 274 PROTEIN_ASSOCIATION: FabF SUBSYSTEM: S_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.41
reversible: false
reactant: 285028
name: R_Hexadecanoyl_acyl_carrier_proteinmalonyl_acyl_carrier_protein__C_acyltransferase

285016
type: SpeciesReference
stoichiometry: 1.0
species: 144334

285076
type: SpeciesReference
stoichiometry: 1.0
species: 144155

285052
type: SpeciesReference
stoichiometry: 1.0
species: 144009

285040
type: SpeciesReference
stoichiometry: 1.0
species: 144607

285064
type: SpeciesReference
stoichiometry: 1.0
species: 144050

285028
type: SpeciesReference
stoichiometry: 1.0
species: 144403

144916
type: Reaction
name: R_Arginyl_tRNA_synthetase
product: 268885
product: 268873
reactant: 268861
product: 268897
reactant: 268837
reversible: false
notes: GENE_ASSOCIATION: 337 PROTEIN_ASSOCIATION: ArgS SUBSYSTEM: S_Amino_Acid_Metabolism PROTEIN_CLASS: 6.1.1.19
reactant: 268849
fast: false

268885
type: SpeciesReference
stoichiometry: 1.0
species: 144114

268873
type: SpeciesReference
stoichiometry: 1.0
species: 144103

268861
type: SpeciesReference
stoichiometry: 1.0
species: 144716

268897
type: SpeciesReference
stoichiometry: 1.0
species: 144639

268837
type: SpeciesReference
stoichiometry: 1.0
species: 144111

268849
type: SpeciesReference
stoichiometry: 1.0
species: 144126