MODEL1011080001
type: SBMLModel
reaction: 232920
reaction: 233788
reaction: 234009
reaction: 233076
species: 231998
reaction: 233672
reaction: 233928
reaction: 233772
reaction: 233933
reaction: 233497
species: 232659
reaction: 232896
species: 231969
reaction: 233189
reaction: 233160
reaction: 233261
reaction: 232912
reaction: 233280
reaction: 234133
species: 232627
species: 232420
reaction: 234000
species: 231730
reaction: 233384
reaction: 233805
reaction: 234228
reaction: 232972
species: 231993
reaction: 234084
reaction: 232997
species: 231737
species: 231326
reaction: 233841
reaction: 233533
reaction: 233613
reaction: 233400
reaction: 234105
reaction: 233005
reaction: 233305
reaction: 233945
reaction: 233592
reaction: 233469
species: 232607
reaction: 234185
species: 231837
reaction: 234052
reaction: 232859
reaction: 233584
species: 232587
reaction: 232935
species: 231897
reaction: 232726
species: 231938
reaction: 233728
reaction: 233192
reaction: 233593
reaction: 233208
reaction: 233357
reaction: 233460
species: 231605
reaction: 233065
reaction: 234165
reaction: 233897
reaction: 233564
reaction: 233224
reaction: 233688
reaction: 234032
reaction: 233661
species: 232391
reaction: 232840
reaction: 233821
species: 232278
reaction: 233941
species: 231913
reaction: 234233
species: 231797
species: 231745
reaction: 233328
species: 231334

232920
type: Reaction
product: 202519
product: 202507
reactant: 202495
fast: false
reversible: false
name: 1.14.99.30

202519
type: SpeciesReference
stoichiometry: 1.0
species: 232495

232495
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Hydrogen

231307
type: Compartment
constant: true
size: NaN
spatial dimensions: 3.0

202507
type: SpeciesReference
stoichiometry: 1.0
species: 232163

232163
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Neurosporene

202495
type: SpeciesReference
stoichiometry: 1.0
species: 232162

232162
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: zeta-Carotene

233788
type: Reaction
product: 224960
fast: false
reversible: true
name: Exchange: (Cobalamide Coenzyme)

224960
type: SpeciesReference
stoichiometry: 1.0
species: 231962

231962
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Cobamide coenzyme (E)

231308
type: Compartment
constant: true
size: NaN
spatial dimensions: 3.0

234009
type: Reaction
product: 230150
reactant: 230138
reactant: 230126
reactant: 230114
fast: false
reversible: false
name: ThiG

230150
type: SpeciesReference
stoichiometry: 1.0
species: 231485

231485
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 4-Methyl-5-(2-phosphoethyl)-thiazole

230138
type: SpeciesReference
stoichiometry: 1.0
species: 231921

231921
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Iminoglycine

230126
type: SpeciesReference
stoichiometry: 1.0
species: 232516

232516
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Tyrosine

230114
type: SpeciesReference
stoichiometry: 1.0
species: 231893

231893
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: C15815

233076
type: Reaction
product: 206610
product: 206598
reactant: 206586
reactant: 206574
fast: false
reversible: true
name: N-Succinyl-L-2,6-diaminoheptanedioate:2-ocoglytarate

206610
type: SpeciesReference
stoichiometry: 1.0
species: 232372

232372
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Glutamate

206598
type: SpeciesReference
stoichiometry: 1.0
species: 231990

231990
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: N-Succinyl-2-L-amino-6-oxoheptanedioate

206586
type: SpeciesReference
stoichiometry: 1.0
species: 232375

232375
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Oxoglutarate

206574
type: SpeciesReference
stoichiometry: 1.0
species: 231461

231461
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: N-Succinyl-LL-2,6-diaminoheptanedioate

231998
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Threonine (E)

233672
type: Reaction
name: 4.4.1.1; 4.4.1.8
reversible: false
product: 222300
product: 222276
product: 222288
fast: false
product: 222313
reactant: 222264
reactant: 222252

222300
type: SpeciesReference
stoichiometry: 1.0
species: 232106

232106
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Thiocysteine

222276
type: SpeciesReference
stoichiometry: 1.0
species: 232411

232411
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Pyruvate

222288
type: SpeciesReference
stoichiometry: 1.0
species: 231545

231545
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: NH3

222313
type: SpeciesReference
stoichiometry: 1.0
species: 232520

232520
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: H+

222264
type: SpeciesReference
stoichiometry: 1.0
species: 231570

231570
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: H2O

222252
type: SpeciesReference
stoichiometry: 1.0
species: 231866

231866
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Cystine

233928
type: Reaction
product: 228111
product: 228098
reactant: 228086
reactant: 228073
fast: false
reversible: true
name: Hexanoyl-CoA:acetyl-CoA C-acyltransferase

228111
type: SpeciesReference
stoichiometry: 1.0
species: 232127

232127
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Oxooctanoyl-CoA

228098
type: SpeciesReference
stoichiometry: 1.0
species: 231517

231517
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: CoA

228086
type: SpeciesReference
stoichiometry: 1.0
species: 232407

232407
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Acetyl-CoA

228073
type: SpeciesReference
stoichiometry: 1.0
species: 231713

231713
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Hexanoyl-CoA

233772
type: Reaction
product: 224603
product: 224591
reactant: 224579
reactant: 224567
fast: false
reversible: true
name: L-Ornithine:2-oxo-acid aminotransferase

224603
type: SpeciesReference
stoichiometry: 1.0
species: 232372

224591
type: SpeciesReference
stoichiometry: 1.0
species: 232202

232202
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Glutamate 5-semialdehyde

224579
type: SpeciesReference
stoichiometry: 1.0
species: 232375

224567
type: SpeciesReference
stoichiometry: 1.0
species: 232676

232676
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Ornithine

233933
type: Reaction
product: 228195
fast: false
reversible: true
name: Exchange: (H+)

228195
type: SpeciesReference
stoichiometry: 1.0
species: 232042

232042
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: H+ (E)

233497
type: Reaction
fast: false
reactant: 217462
product: 217498
reactant: 217450
product: 217486
reversible: false
reactant: 217474
reactant: 217438
name: L-Cystathionine Lysteine-lyase (deaminating)

217462
type: SpeciesReference
stoichiometry: 1.0
species: 231362

231362
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Oxobutanoate

217498
type: SpeciesReference
stoichiometry: 1.0
species: 231570

217450
type: SpeciesReference
stoichiometry: 1.0
species: 231545

217486
type: SpeciesReference
stoichiometry: 1.0
species: 232215

232215
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Cystathionine

217474
type: SpeciesReference
stoichiometry: 1.0
species: 232520

217438
type: SpeciesReference
stoichiometry: 1.0
species: 232567

232567
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Cysteine

232659
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Thymine

232896
type: Reaction
product: 201782
product: 201770
reactant: 201758
reactant: 201746
fast: false
reversible: false
name: Butanoyl-CoA:oxygen 2-oxidoreductase

201782
type: SpeciesReference
stoichiometry: 1.0
species: 232259

232259
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Crotonoyl-CoA

201770
type: SpeciesReference
stoichiometry: 1.0
species: 231914

231914
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: FADH2

201758
type: SpeciesReference
stoichiometry: 1.0
species: 231538

231538
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: FAD

201746
type: SpeciesReference
stoichiometry: 1.0
species: 231409

231409
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Butanoyl-CoA

231969
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5'-Deoxyadenosine

233189
type: Reaction
product: 210339
product: 210327
reactant: 210315
reactant: 210303
fast: false
reversible: true
name: ATP:nucleoside-diphosphate phosphatransferase

210339
type: SpeciesReference
stoichiometry: 1.0
species: 232675

232675
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: UTP

210327
type: SpeciesReference
stoichiometry: 1.0
species: 231605

231605
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: ADP

210315
type: SpeciesReference
stoichiometry: 1.0
species: 231542

231542
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: UDP

210303
type: SpeciesReference
stoichiometry: 1.0
species: 231573

231573
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: ATP

233160
type: Reaction
product: 209489
product: 209477
reactant: 209465
reactant: 209453
fast: false
reversible: false
name: O-Phospho-L-homoserine phospho-lyase (adding water)

209489
type: SpeciesReference
stoichiometry: 1.0
species: 231609

231609
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Orthophosphate

209477
type: SpeciesReference
stoichiometry: 1.0
species: 232255

232255
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Threonine

209465
type: SpeciesReference
stoichiometry: 1.0
species: 231570

209453
type: SpeciesReference
stoichiometry: 1.0
species: 231837

231837
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: O-Phospho-L-homoserine

233261
type: Reaction
reactant: 212241
reactant: 212265
product: 212313
product: 212289
fast: false
reactant: 212253
product: 212277
product: 212301
name: ATP:L-methione S-adenosyltransferase
reversible: false

212241
type: SpeciesReference
stoichiometry: 1.0
species: 231573

212265
type: SpeciesReference
stoichiometry: 1.0
species: 231570

212313
type: SpeciesReference
stoichiometry: 1.0
species: 232520

212289
type: SpeciesReference
stoichiometry: 1.0
species: 231513

231513
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Pyrophosphate

212253
type: SpeciesReference
stoichiometry: 1.0
species: 232668

232668
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Methionine

212277
type: SpeciesReference
stoichiometry: 1.0
species: 231609

212301
type: SpeciesReference
stoichiometry: 1.0
species: 231549

231549
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: S-Adenosyl-L-methionine

232912
type: Reaction
product: 202326
product: 202314
product: 202302
reactant: 202290
reactant: 202278
fast: false
reversible: true
name: 1.8.1.4

202326
type: SpeciesReference
stoichiometry: 1.0
species: 232520

202314
type: SpeciesReference
stoichiometry: 1.0
species: 231589

231589
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: NADH

202302
type: SpeciesReference
stoichiometry: 1.0
species: 231377

231377
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Lipoamide

202290
type: SpeciesReference
stoichiometry: 1.0
species: 231593

231593
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: NAD+

202278
type: SpeciesReference
stoichiometry: 1.0
species: 231981

231981
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Dihydrolipoamide

233280
type: Reaction
product: 212812
product: 212799
product: 212787
reactant: 212775
reactant: 212762
fast: false
reversible: true
name: (3S)-3-Hydroxyacyl-CoA:NAD+ oxidoreductase

212812
type: SpeciesReference
stoichiometry: 1.0
species: 232520

212799
type: SpeciesReference
stoichiometry: 1.0
species: 231589

212787
type: SpeciesReference
stoichiometry: 1.0
species: 231625

231625
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Benzoylsuccinyl-CoA

212775
type: SpeciesReference
stoichiometry: 1.0
species: 231593

212762
type: SpeciesReference
stoichiometry: 1.0
species: 231649

231649
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (Hydroxymethylphenyl)succinyl-CoA

234133
type: Reaction
product: 234035
product: 234023
reactant: 234010
reactant: 233998
fast: false
reversible: false
name: Inosine 5'-monophosphate phosphohydrolase

234035
type: SpeciesReference
stoichiometry: 1.0
species: 231609

234023
type: SpeciesReference
stoichiometry: 1.0
species: 232556

232556
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Inosine

234010
type: SpeciesReference
stoichiometry: 1.0
species: 231570

233998
type: SpeciesReference
stoichiometry: 1.0
species: 231438

231438
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: IMP

232627
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Ile)

232420
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Glycine

234000
type: Reaction
product: 229845
product: 229833
reactant: 229821
fast: false
reversible: true
name: (3R)-3-Hydroxyacyl-CoA hydro-lyase

229845
type: SpeciesReference
stoichiometry: 1.0
species: 231570

229833
type: SpeciesReference
stoichiometry: 1.0
species: 232065

232065
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: cis-2,3-Dehydroacyl-CoA

229821
type: SpeciesReference
stoichiometry: 1.0
species: 232347

232347
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (3R)-3-Hydroxyacyl-CoA

231730
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Iron (E)

233384
type: Reaction
product: 215419
product: 215407
reactant: 215395
reactant: 215383
fast: false
reversible: true
name: Symport: (Deoxyguanosine:H+)

215419
type: SpeciesReference
stoichiometry: 1.0
species: 232520

215407
type: SpeciesReference
stoichiometry: 1.0
species: 231777

231777
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Deoxyguanosine

215395
type: SpeciesReference
stoichiometry: 1.0
species: 232166

232166
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: H+ (pmf associated)

215383
type: SpeciesReference
stoichiometry: 1.0
species: 232472

232472
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Deoxyguanosine (E)

233805
type: Reaction
reactant: 225429
name: ABC-T: (Vit B12)
reactant: 225417
product: 225453
fast: false
product: 225489
product: 225465
reactant: 225441
reversible: false
product: 225477

225429
type: SpeciesReference
stoichiometry: 1.0
species: 231573

225417
type: SpeciesReference
stoichiometry: 1.0
species: 232672

232672
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Vitamin B12 (E)

225453
type: SpeciesReference
stoichiometry: 1.0
species: 232275

232275
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Vitamin B12

225489
type: SpeciesReference
stoichiometry: 1.0
species: 232520

225465
type: SpeciesReference
stoichiometry: 1.0
species: 231605

225441
type: SpeciesReference
stoichiometry: 1.0
species: 231570

225477
type: SpeciesReference
stoichiometry: 1.0
species: 231609

234228
type: Reaction
product: 236639
product: 236627
reactant: 236615
reactant: 236603
reactant: 236591
fast: false
reversible: false
name: 3-Methyl-2-oxobutanoate:lipoamide oxidoreductase(decarboxylating and

236639
type: SpeciesReference
stoichiometry: 1.0
species: 231518

231518
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: CO2

236627
type: SpeciesReference
stoichiometry: 1.0
species: 231465

231465
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: S-(2-Methylpropanoyl)-dihydrolipoamide

236615
type: SpeciesReference
stoichiometry: 1.0
species: 232520

236603
type: SpeciesReference
stoichiometry: 1.0
species: 231377

236591
type: SpeciesReference
stoichiometry: 1.0
species: 232475

232475
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Methyl-2-oxobutanoic acid

232972
type: Reaction
product: 204003
fast: false
reversible: true
name: Exchange: (Arsenite)

204003
type: SpeciesReference
stoichiometry: 1.0
species: 232343

232343
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Arsenite (E)

231993
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Succinate (E)

234084
type: Reaction
product: 232232
fast: false
reversible: true
name: Exchange: (Deoxyuridine)

232232
type: SpeciesReference
stoichiometry: 1.0
species: 232403

232403
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Deoxyuridine (E)

232997
type: Reaction
reactant: 204574
reactant: 204562
product: 204635
fast: false
product: 204598
reversible: false
product: 204610
reactant: 204586
product: 204623
name: 6.1.1.21

204574
type: SpeciesReference
stoichiometry: 1.0
species: 231410

231410
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Histidine

204562
type: SpeciesReference
stoichiometry: 1.0
species: 231573

204635
type: SpeciesReference
stoichiometry: 1.0
species: 232520

204598
type: SpeciesReference
stoichiometry: 1.0
species: 232396

232396
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: AMP

204610
type: SpeciesReference
stoichiometry: 1.0
species: 231513

204586
type: SpeciesReference
stoichiometry: 1.0
species: 232632

232632
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(His)

204623
type: SpeciesReference
stoichiometry: 1.0
species: 232119

232119
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Histidyl-tRNA(His)

231737
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: NH3 (E)

231326
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (R)-Lactate

233841
type: Reaction
product: 226504
product: 226492
product: 226480
reactant: 226468
reactant: 226456
fast: false
reversible: false
name: 2.7.8.26

226504
type: SpeciesReference
stoichiometry: 1.0
species: 232520

226492
type: SpeciesReference
stoichiometry: 1.0
species: 232476

232476
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: GMP

226480
type: SpeciesReference
stoichiometry: 1.0
species: 232314

232314
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cobamide coenzyme

226468
type: SpeciesReference
stoichiometry: 1.0
species: 232279

232279
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: alpha-Ribazole

226456
type: SpeciesReference
stoichiometry: 1.0
species: 231546

231546
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Adenosine-GDP-cobinamide

233533
type: Reaction
product: 218563
product: 218551
reactant: 218539
reactant: 218527
fast: false
reversible: true
name: Xanthosine:orthophosphate ribosyltransferase

218563
type: SpeciesReference
stoichiometry: 1.0
species: 231450

231450
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Ribose 1-phosphate

218551
type: SpeciesReference
stoichiometry: 1.0
species: 232034

232034
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Xanthine

218539
type: SpeciesReference
stoichiometry: 1.0
species: 231609

218527
type: SpeciesReference
stoichiometry: 1.0
species: 232491

232491
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Xanthosine

233613
type: Reaction
product: 220770
product: 220757
product: 220745
reactant: 220732
reactant: 220719
fast: false
reversible: true
name: (S)-3-Hydroxybutanoyl-CoA:NAD+ oxidoreductase

220770
type: SpeciesReference
stoichiometry: 1.0
species: 232520

220757
type: SpeciesReference
stoichiometry: 1.0
species: 231589

220745
type: SpeciesReference
stoichiometry: 1.0
species: 231769

231769
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Acetoacetyl-CoA

220732
type: SpeciesReference
stoichiometry: 1.0
species: 231593

220719
type: SpeciesReference
stoichiometry: 1.0
species: 232029

232029
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-3-Hydroxybutanoyl-CoA

233400
type: Reaction
product: 215758
fast: false
reversible: true
name: Exchange: (L-Glutamate)

215758
type: SpeciesReference
stoichiometry: 1.0
species: 231698

231698
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Glutamate (E)

234105
type: Reaction
product: 232938
product: 232926
reactant: 232914
reactant: 232902
reactant: 232890
fast: false
reversible: false
name: 4.1.1.39

232938
type: SpeciesReference
stoichiometry: 2.0
species: 232520

232926
type: SpeciesReference
stoichiometry: 2.0
species: 232323

232323
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Phospho-D-glycerate

232914
type: SpeciesReference
stoichiometry: 1.0
species: 231570

232902
type: SpeciesReference
stoichiometry: 1.0
species: 231518

232890
type: SpeciesReference
stoichiometry: 1.0
species: 232118

232118
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Ribulose 1,5-bisphosphate

233005
type: Reaction
product: 204955
product: 204943
product: 204931
reactant: 204919
reactant: 204907
fast: false
reversible: false
name: Formamide amidohydrolase

204955
type: SpeciesReference
stoichiometry: 1.0
species: 232520

204943
type: SpeciesReference
stoichiometry: 1.0
species: 231545

204931
type: SpeciesReference
stoichiometry: 1.0
species: 232307

232307
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Formate

204919
type: SpeciesReference
stoichiometry: 1.0
species: 231570

204907
type: SpeciesReference
stoichiometry: 1.0
species: 231846

231846
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Formamide

233305
type: Reaction
product: 213478
product: 213466
reactant: 213454
reactant: 213442
fast: false
reversible: false
name: Acetyl-CoA:D-glucosamine-6-phosphate N-acetyltransferase

213478
type: SpeciesReference
stoichiometry: 1.0
species: 231902

231902
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: N-Acetyl-D-glucosamine 6-phosphate

213466
type: SpeciesReference
stoichiometry: 1.0
species: 231517

213454
type: SpeciesReference
stoichiometry: 1.0
species: 231878

231878
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Glucosamine 6-phosphate

213442
type: SpeciesReference
stoichiometry: 1.0
species: 232407

233945
type: Reaction
product: 228388
product: 228376
product: 228364
reactant: 228351
reactant: 228339
fast: false
reversible: true
name: (S)-Hydroxydecanoyl-CoA:NAD+ oxidoreductase

228388
type: SpeciesReference
stoichiometry: 1.0
species: 232520

228376
type: SpeciesReference
stoichiometry: 1.0
species: 231589

228364
type: SpeciesReference
stoichiometry: 1.0
species: 232135

232135
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Oxodecanoyl-CoA

228351
type: SpeciesReference
stoichiometry: 1.0
species: 231593

228339
type: SpeciesReference
stoichiometry: 1.0
species: 232138

232138
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-Hydroxydecanoyl-CoA

233592
type: Reaction
product: 220184
product: 220172
reactant: 220160
reactant: 220147
fast: false
reversible: false
name: 3.1.3.-

220184
type: SpeciesReference
stoichiometry: 1.0
species: 231609

220172
type: SpeciesReference
stoichiometry: 1.0
species: 232053

232053
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 4-(1-D-Ribitylamino)-5-amino-2,6-dihydroxypyrimidine

220160
type: SpeciesReference
stoichiometry: 1.0
species: 231570

220147
type: SpeciesReference
stoichiometry: 1.0
species: 231329

231329
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5-Amino-6-(5'-phosphoribitylamino)uracil

233469
type: Reaction
product: 216977
reactant: 216915
product: 216951
reactant: 216927
reactant: 216939
name: (R)-Mevalonate:NADP+ oxidoreductase (CoA acylating)
product: 216964
reversible: false
fast: false

216977
type: SpeciesReference
stoichiometry: 2.0
species: 231597

231597
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: NADP+

216915
type: SpeciesReference
stoichiometry: 1.0
species: 231913

231913
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-3-Hydroxy-3-methylglutaryl-CoA

216951
type: SpeciesReference
stoichiometry: 1.0
species: 231550

231550
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (R)-Mevalonate

216927
type: SpeciesReference
stoichiometry: 2.0
species: 231598

231598
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: NADPH

216939
type: SpeciesReference
stoichiometry: 2.0
species: 232520

216964
type: SpeciesReference
stoichiometry: 1.0
species: 231517

232607
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Homoserine

234185
type: Reaction
product: 235551
reactant: 235539
fast: false
reversible: true
name: Isopentenyl-diphosphate delta3-delta2-isomerase

235551
type: SpeciesReference
stoichiometry: 1.0
species: 231422

231422
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Dimethylallyl diphosphate

235539
type: SpeciesReference
stoichiometry: 1.0
species: 231458

231458
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Isopentenyl diphosphate

234052
type: Reaction
product: 231131
product: 231118
reactant: 231106
reactant: 231094
fast: false
reversible: false
name: Antiport: (K+:H+)

231131
type: SpeciesReference
stoichiometry: 2.0
species: 232520

231118
type: SpeciesReference
stoichiometry: 1.0
species: 232427

232427
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Potassium (E)

231106
type: SpeciesReference
stoichiometry: 2.0
species: 232166

231094
type: SpeciesReference
stoichiometry: 1.0
species: 231418

231418
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Potassium

232859
type: Reaction
product: 200617
product: 200604
product: 200592
reactant: 200580
reactant: 200568
fast: false
reversible: false
name: 1.1.1.119

200617
type: SpeciesReference
stoichiometry: 1.0
species: 232520

200604
type: SpeciesReference
stoichiometry: 1.0
species: 231598

200592
type: SpeciesReference
stoichiometry: 1.0
species: 232327

232327
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Glucono-1,5-lactone

200580
type: SpeciesReference
stoichiometry: 1.0
species: 231597

200568
type: SpeciesReference
stoichiometry: 1.0
species: 232456

232456
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Glucose

233584
type: Reaction
product: 219953
product: 219941
product: 219929
reactant: 219917
reactant: 219905
fast: false
reversible: true
name: 2.1.1.107

219953
type: SpeciesReference
stoichiometry: 2.0
species: 232520

219941
type: SpeciesReference
stoichiometry: 1.0
species: 232246

232246
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Precorrin 2

219929
type: SpeciesReference
stoichiometry: 2.0
species: 232412

232412
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: S-Adenosyl-L-homocysteine

219917
type: SpeciesReference
stoichiometry: 1.0
species: 232158

232158
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Uroporphyrinogen III

219905
type: SpeciesReference
stoichiometry: 2.0
species: 231549

232587
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Acetoacetate

232935
type: Reaction
product: 202990
product: 202978
product: 202966
reactant: 202954
reactant: 202942
fast: false
reversible: false
name: ATP:riboflavin 5'-phosphotransferase

202990
type: SpeciesReference
stoichiometry: 1.0
species: 232520

202978
type: SpeciesReference
stoichiometry: 1.0
species: 232616

232616
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: FMN

202966
type: SpeciesReference
stoichiometry: 1.0
species: 231605

202954
type: SpeciesReference
stoichiometry: 1.0
species: 231341

231341
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Riboflavin

202942
type: SpeciesReference
stoichiometry: 1.0
species: 231573

231897
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Glutamine (E)

232726
type: Reaction
fast: false
product: 196889
reactant: 196829
reversible: false
reactant: 196853
product: 196877
product: 196865
name: Ferrocytochrome-c:oxygen oxidoreductase
reactant: 196841

196889
type: SpeciesReference
stoichiometry: 1.0
species: 231453

231453
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Ferricytochrome c

196829
type: SpeciesReference
stoichiometry: 1.0
species: 232503

232503
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Nitrite

196853
type: SpeciesReference
stoichiometry: 1.0
species: 232520

196877
type: SpeciesReference
stoichiometry: 1.0
species: 231570

196865
type: SpeciesReference
stoichiometry: 1.0
species: 231473

231473
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Nitric oxide

196841
type: SpeciesReference
stoichiometry: 1.0
species: 231457

231457
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Ferrocytochrome c

231938
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dTDP

233728
type: Reaction
product: 223578
product: 223566
reactant: 223554
reactant: 223542
reactant: 223530
fast: false
reversible: false
name: L-Serine hydro-lyase (adding homocysteine)

223578
type: SpeciesReference
stoichiometry: 1.0
species: 231570

223566
type: SpeciesReference
stoichiometry: 1.0
species: 232215

223554
type: SpeciesReference
stoichiometry: 1.0
species: 232520

223542
type: SpeciesReference
stoichiometry: 1.0
species: 232539

232539
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Homocysteine

223530
type: SpeciesReference
stoichiometry: 1.0
species: 232624

232624
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Serine

233192
type: Reaction
product: 210400
product: 210388
product: 210376
reactant: 210364
reactant: 210352
fast: false
reversible: true
name: Chorismate pyruvate-lyase (amino-accepting)

210400
type: SpeciesReference
stoichiometry: 1.0
species: 231570

210388
type: SpeciesReference
stoichiometry: 1.0
species: 232411

210376
type: SpeciesReference
stoichiometry: 1.0
species: 231366

231366
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Anthranilate

210364
type: SpeciesReference
stoichiometry: 1.0
species: 231545

210352
type: SpeciesReference
stoichiometry: 1.0
species: 231337

231337
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Chorismate

233593
type: Reaction
product: 220232
product: 220220
product: 220208
reactant: 220196
fast: false
reversible: false
name: 5.4.99.-

220232
type: SpeciesReference
stoichiometry: 1.0
species: 232520

220220
type: SpeciesReference
stoichiometry: 1.0
species: 232307

220208
type: SpeciesReference
stoichiometry: 1.0
species: 231773

231773
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3, 4-Dihydroxy-2-butanone 4-phosphate

220196
type: SpeciesReference
stoichiometry: 1.0
species: 232334

232334
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Ribulose 5-phosphate

233208
type: Reaction
product: 210875
product: 210863
reactant: 210851
reactant: 210839
fast: false
reversible: true
name: Symport: (L-Valine:H+)

210875
type: SpeciesReference
stoichiometry: 1.0
species: 232520

210863
type: SpeciesReference
stoichiometry: 1.0
species: 232254

232254
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Valine

210851
type: SpeciesReference
stoichiometry: 1.0
species: 232166

210839
type: SpeciesReference
stoichiometry: 1.0
species: 232005

232005
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Valine (E)

233357
type: Reaction
product: 214780
product: 214768
product: 214756
reactant: 214744
reactant: 214732
fast: false
reversible: false
name: 3.5.1.10

214780
type: SpeciesReference
stoichiometry: 1.0
species: 232520

214768
type: SpeciesReference
stoichiometry: 1.0
species: 231397

231397
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Tetrahydrofolate

214756
type: SpeciesReference
stoichiometry: 1.0
species: 232307

214744
type: SpeciesReference
stoichiometry: 1.0
species: 231570

214732
type: SpeciesReference
stoichiometry: 1.0
species: 231425

231425
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 10-Formyltetrahydrofolate

233460
type: Reaction
product: 216782
fast: false
reversible: true
name: Exchange: (Glycine)

216782
type: SpeciesReference
stoichiometry: 1.0
species: 231662

231662
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Glycine (E)

233065
type: Reaction
reversible: false
fast: false
product: 206296
product: 206308
name: O3-Acetyl-L-serine acetate-lyase (adding hydrogen sulfide)
reactant: 206259
reactant: 206247
product: 206272
product: 206321
reactant: 206235
product: 206284

206296
type: SpeciesReference
stoichiometry: 1.0
species: 231818

231818
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Oxidized thioredoxin

206308
type: SpeciesReference
stoichiometry: 1.0
species: 232463

232463
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Acetate

206259
type: SpeciesReference
stoichiometry: 1.0
species: 231821

231821
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Thioredoxin

206247
type: SpeciesReference
stoichiometry: 1.0
species: 231745

231745
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Thiosulfate

206272
type: SpeciesReference
stoichiometry: 1.0
species: 232567

206321
type: SpeciesReference
stoichiometry: 1.0
species: 232520

206235
type: SpeciesReference
stoichiometry: 1.0
species: 232278

232278
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: O-Acetyl-L-serine

206284
type: SpeciesReference
stoichiometry: 1.0
species: 232563

232563
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Sulfite

234165
type: Reaction
reactant: 234996
product: 235020
product: 235032
reversible: false
reactant: 234984
reactant: 235008
name: IMP:NAD+ oxidoreductase
fast: false
product: 235044

234996
type: SpeciesReference
stoichiometry: 1.0
species: 231593

235020
type: SpeciesReference
stoichiometry: 1.0
species: 231398

231398
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Xanthosine 5'-phosphate

235032
type: SpeciesReference
stoichiometry: 1.0
species: 231589

234984
type: SpeciesReference
stoichiometry: 1.0
species: 231438

235008
type: SpeciesReference
stoichiometry: 1.0
species: 231570

235044
type: SpeciesReference
stoichiometry: 1.0
species: 232520

233897
type: Reaction
product: 227472
product: 227460
product: 227447
reactant: 227435
reactant: 227423
fast: false
reversible: true
name: (S)-3-Hydroxytetradecanoyl-CoA:NAD+ oxidoreductase

227472
type: SpeciesReference
stoichiometry: 1.0
species: 232520

227460
type: SpeciesReference
stoichiometry: 1.0
species: 231589

227447
type: SpeciesReference
stoichiometry: 1.0
species: 232146

232146
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Oxotetradecanoyl-CoA

227435
type: SpeciesReference
stoichiometry: 1.0
species: 231593

227423
type: SpeciesReference
stoichiometry: 1.0
species: 232147

232147
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-3-Hydroxytetradecanoyl-CoA

233564
type: Reaction
product: 219422
product: 219409
reactant: 219396
reactant: 219384
fast: false
reversible: false
name: L-Asparagine amidohydrolase

219422
type: SpeciesReference
stoichiometry: 1.0
species: 231545

219409
type: SpeciesReference
stoichiometry: 1.0
species: 232243

232243
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Aspartate

219396
type: SpeciesReference
stoichiometry: 1.0
species: 231570

219384
type: SpeciesReference
stoichiometry: 1.0
species: 232527

232527
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Asparagine

233224
type: Reaction
product: 211323
product: 211311
product: 211299
reactant: 211287
reactant: 211275
fast: false
reversible: false
name: FAD nucleotidohydrolase

211323
type: SpeciesReference
stoichiometry: 2.0
species: 232520

211311
type: SpeciesReference
stoichiometry: 1.0
species: 232616

211299
type: SpeciesReference
stoichiometry: 1.0
species: 232396

211287
type: SpeciesReference
stoichiometry: 1.0
species: 231570

211275
type: SpeciesReference
stoichiometry: 1.0
species: 231538

233688
type: Reaction
product: 222614
product: 222602
product: 222590
reactant: 222578
reactant: 222566
fast: false
reversible: false
name: 4.1.1.39

222614
type: SpeciesReference
stoichiometry: 2.0
species: 232520

222602
type: SpeciesReference
stoichiometry: 1.0
species: 232680

232680
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Phosphoglycolate

222590
type: SpeciesReference
stoichiometry: 1.0
species: 232323

222578
type: SpeciesReference
stoichiometry: 1.0
species: 231606

231606
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Oxygen

222566
type: SpeciesReference
stoichiometry: 1.0
species: 232118

234032
type: Reaction
product: 230632
product: 230620
product: 230608
reactant: 230596
fast: false
reversible: true
name: -

230632
type: SpeciesReference
stoichiometry: 1.0
species: 232520

230620
type: SpeciesReference
stoichiometry: 1.0
species: 231570

230608
type: SpeciesReference
stoichiometry: 1.0
species: 231342

231342
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2,3,4,5-Tetrahydrodipicolinate

230596
type: SpeciesReference
stoichiometry: 1.0
species: 231346

231346
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-2-Amino-6-oxoheptanedioate

233661
type: Reaction
product: 222036
product: 222024
product: 222012
reactant: 222000
reactant: 221988
fast: false
reversible: false
name: 3.1.2.4

222036
type: SpeciesReference
stoichiometry: 1.0
species: 232520

222024
type: SpeciesReference
stoichiometry: 1.0
species: 232452

232452
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-3-Hydroxyisobutyrate

222012
type: SpeciesReference
stoichiometry: 1.0
species: 231517

222000
type: SpeciesReference
stoichiometry: 1.0
species: 231570

221988
type: SpeciesReference
stoichiometry: 1.0
species: 232459

232459
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-3-Hydroxyisobutyryl-CoA

232391
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Indoleglycerol phosphate

232840
type: Reaction
product: 200098
product: 200086
reactant: 200074
reactant: 200062
fast: false
reversible: true
name: 2.7.7.24

200098
type: SpeciesReference
stoichiometry: 1.0
species: 232663

232663
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dTDPglucose

200086
type: SpeciesReference
stoichiometry: 1.0
species: 231513

200074
type: SpeciesReference
stoichiometry: 1.0
species: 231369

231369
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Glucose 1-phosphate

200062
type: SpeciesReference
stoichiometry: 1.0
species: 231725

231725
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dTTP

233821
type: Reaction
product: 225925
product: 225913
product: 225901
reactant: 225889
reactant: 225876
fast: false
reversible: true
name: 3-Phosphoserine:2-oxoglutarate aminotransferase

225925
type: SpeciesReference
stoichiometry: 1.0
species: 232520

225913
type: SpeciesReference
stoichiometry: 1.0
species: 232375

225901
type: SpeciesReference
stoichiometry: 1.0
species: 232038

232038
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: O-Phospho-L-serine

225889
type: SpeciesReference
stoichiometry: 1.0
species: 232372

225876
type: SpeciesReference
stoichiometry: 1.0
species: 232002

232002
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Phosphonooxypyruvate

233941
type: Reaction
product: 228315
product: 228303
reactant: 228291
fast: false
reversible: true
name: (S)-Hydroxyoctanoyl-CoA hydro-lyase

228315
type: SpeciesReference
stoichiometry: 1.0
species: 231570

228303
type: SpeciesReference
stoichiometry: 1.0
species: 231697

231697
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: trans-Oct-2-enoyl-CoA

228291
type: SpeciesReference
stoichiometry: 1.0
species: 232134

232134
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-Hydroxyoctanoyl-CoA

234233
type: Reaction
product: 236797
product: 236785
product: 236773
reactant: 236761
reactant: 236749
fast: false
reversible: false
name: ATP:D-fructose 1-phosphotransferase

236797
type: SpeciesReference
stoichiometry: 1.0
species: 232520

236785
type: SpeciesReference
stoichiometry: 1.0
species: 232404

232404
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Fructose 1-phosphate

236773
type: SpeciesReference
stoichiometry: 1.0
species: 231605

236761
type: SpeciesReference
stoichiometry: 1.0
species: 232564

232564
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Fructose

236749
type: SpeciesReference
stoichiometry: 1.0
species: 231573

231797
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-Dihydroorotate

233328
type: Reaction
name: ABC-T: Orthophosphate
reversible: false
fast: false
reactant: 214117
product: 214141
product: 214153
product: 214129
reactant: 214093
reactant: 214105

214117
type: SpeciesReference
stoichiometry: 1.0
species: 231570

214141
type: SpeciesReference
stoichiometry: 1.0
species: 232520

214153
type: SpeciesReference
stoichiometry: 2.0
species: 231609

214129
type: SpeciesReference
stoichiometry: 1.0
species: 231605

214093
type: SpeciesReference
stoichiometry: 1.0
species: 231766

231766
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Orthophosphate (E)

214105
type: SpeciesReference
stoichiometry: 1.0
species: 231573

231334
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Folate

233868
type: Reaction
product: 226916
product: 226904
reactant: 226892
fast: false
reversible: true
name: (S)-3-Hydroxytetradecanoyl-CoA hydro-lyase

226916
type: SpeciesReference
stoichiometry: 1.0
species: 231570

226904
type: SpeciesReference
stoichiometry: 1.0
species: 231701

231701
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: trans-Tetradec-2-enoyl-CoA

226892
type: SpeciesReference
stoichiometry: 1.0
species: 232147

232282
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Isoleucine (E)

234089
type: Reaction
product: 232305
product: 232293
reactant: 232281
reactant: 232269
fast: false
reversible: true
name: Agmatine amidinohydrolase

232305
type: SpeciesReference
stoichiometry: 1.0
species: 232507

232507
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Urea

232293
type: SpeciesReference
stoichiometry: 1.0
species: 231445

231445
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Putrescine

232281
type: SpeciesReference
stoichiometry: 1.0
species: 231570

232269
type: SpeciesReference
stoichiometry: 1.0
species: 232688

232688
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Agmatine

233565
type: Reaction
product: 219446
reactant: 219434
fast: false
reversible: false
name: GTP 7,8-8,9-dihydrolase

219446
type: SpeciesReference
stoichiometry: 1.0
species: 232460

232460
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2,5-Diamino-6-(5'-triphosphoryl-3',4'-trihydroxy-2'-oxopentyl)-

219434
type: SpeciesReference
stoichiometry: 1.0
species: 231618

231618
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2,5-Diaminopyrimidine nucleoside triphosphate

231765
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cobalt-precorrin 2

233312
type: Reaction
product: 213599
product: 213586
product: 213574
reactant: 213562
reactant: 213550
fast: false
reversible: false
name: AMP:pyrophosphate phosphoribosyltransferase

213599
type: SpeciesReference
stoichiometry: 1.0
species: 232520

213586
type: SpeciesReference
stoichiometry: 1.0
species: 231513

213574
type: SpeciesReference
stoichiometry: 1.0
species: 232396

213562
type: SpeciesReference
stoichiometry: 1.0
species: 231310

231310
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5-Phospho-alpha-D-ribose 1-diphosphate

213550
type: SpeciesReference
stoichiometry: 1.0
species: 232519

232519
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Adenine

233493
type: Reaction
product: 217378
product: 217366
reactant: 217354
reactant: 217342
fast: false
reversible: true
name: N2-Acetyl-L-ornithine:2-oxoglutarate aminotransferase

217378
type: SpeciesReference
stoichiometry: 1.0
species: 232372

217366
type: SpeciesReference
stoichiometry: 1.0
species: 231898

231898
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: N-Acetyl-L-glutamate 5-semialdehyde

217354
type: SpeciesReference
stoichiometry: 1.0
species: 232375

217342
type: SpeciesReference
stoichiometry: 1.0
species: 231790

231790
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: N-Acetylornithine

232500
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Sulfur

233432
type: Reaction
product: 216232
product: 216219
product: 216206
reactant: 216194
reactant: 216182
fast: false
reversible: false
name: ATP:dephospho-CoA 3'-phosphotransferase

216232
type: SpeciesReference
stoichiometry: 1.0
species: 232520

216219
type: SpeciesReference
stoichiometry: 1.0
species: 231517

216206
type: SpeciesReference
stoichiometry: 1.0
species: 231605

216194
type: SpeciesReference
stoichiometry: 1.0
species: 232448

232448
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Dephospho-CoA

216182
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233037
type: Reaction
product: 205559
fast: false
reversible: true
name: Exchange: (Formate)

205559
type: SpeciesReference
stoichiometry: 1.0
species: 231929

231929
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Formate (E)

233996
type: Reaction
product: 229761
product: 229749
reactant: 229737
reactant: 229725
fast: false
reversible: false
name: 2.5.1.3

229761
type: SpeciesReference
stoichiometry: 1.0
species: 232352

232352
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Thiamin monophosphate

229749
type: SpeciesReference
stoichiometry: 1.0
species: 231513

229737
type: SpeciesReference
stoichiometry: 1.0
species: 231485

229725
type: SpeciesReference
stoichiometry: 1.0
species: 231885

231885
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate

231509
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Adenosine

233284
type: Reaction
product: 212950
product: 212938
reactant: 212926
reactant: 212914
fast: false
reversible: false
name: Symport: (L-Ornithine:H+)

212950
type: SpeciesReference
stoichiometry: 1.0
species: 232520

212938
type: SpeciesReference
stoichiometry: 1.0
species: 232676

212926
type: SpeciesReference
stoichiometry: 1.0
species: 232166

212914
type: SpeciesReference
stoichiometry: 1.0
species: 231833

231833
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Ornithine (E)

231429
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Succinate semialdehyde

234073
type: Reaction
product: 232076
fast: false
reversible: true
name: Exchange: (Guanosine)

232076
type: SpeciesReference
stoichiometry: 1.0
species: 232110

232110
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Guanosine (E)

231809
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Geranyl diphosphate

233760
type: Reaction
product: 224314
product: 224302
reactant: 224290
reactant: 224278
fast: false
reversible: false
name: 2.3.1.-

224314
type: SpeciesReference
stoichiometry: 1.0
species: 231981

224302
type: SpeciesReference
stoichiometry: 1.0
species: 232087

232087
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Methylbutanoyl-CoA

224290
type: SpeciesReference
stoichiometry: 1.0
species: 231517

224278
type: SpeciesReference
stoichiometry: 1.0
species: 232340

232340
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: S-(2-Methylbutanoyl)-dihydrolipoamide

234193
type: Reaction
product: 235767
product: 235755
product: 235743
reactant: 235731
reactant: 235719
fast: false
reversible: false
name: Nitrite:(acceptor) oxidoreductase

235767
type: SpeciesReference
stoichiometry: 1.0
species: 231570

235755
type: SpeciesReference
stoichiometry: 2.0
species: 231453

235743
type: SpeciesReference
stoichiometry: 1.0
species: 232503

235731
type: SpeciesReference
stoichiometry: 2.0
species: 231457

235719
type: SpeciesReference
stoichiometry: 1.0
species: 231393

231393
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Nitrate

233988
type: Reaction
name: 1.3.3.3
reactant: 229507
product: 229531
reactant: 229483
reactant: 229495
fast: false
product: 229543
product: 229519
reversible: true

229507
type: SpeciesReference
stoichiometry: 2.0
species: 232520

229531
type: SpeciesReference
stoichiometry: 2.0
species: 231518

229483
type: SpeciesReference
stoichiometry: 1.0
species: 231317

231317
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Coproporphyrinogen III

229495
type: SpeciesReference
stoichiometry: 1.0
species: 231606

229543
type: SpeciesReference
stoichiometry: 2.0
species: 231570

229519
type: SpeciesReference
stoichiometry: 1.0
species: 232266

232266
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Protoporphyrinogen IX

232595
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Gln)

232807
type: Reaction
product: 199194
product: 199182
reactant: 199170
reactant: 199158
fast: false
reversible: false
name: 2.1.2.10

199194
type: SpeciesReference
stoichiometry: 1.0
species: 232520

199182
type: SpeciesReference
stoichiometry: 1.0
species: 231426

231426
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5-Formyltetrahydrofolate

199170
type: SpeciesReference
stoichiometry: 1.0
species: 231570

199158
type: SpeciesReference
stoichiometry: 1.0
species: 231673

231673
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5,10-Methenyltetrahydrofolate

232258
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-(alpha-Hydroxyethyl)thiamine diphosphate

232871
type: Reaction
product: 200924
product: 200912
reactant: 200900
reactant: 200888
fast: false
reversible: false
name: D-Glucose-6-phosphate phosphohydrolase

200924
type: SpeciesReference
stoichiometry: 1.0
species: 231609

200912
type: SpeciesReference
stoichiometry: 1.0
species: 232456

200900
type: SpeciesReference
stoichiometry: 1.0
species: 231917

231917
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: alpha-D-Glucose 6-phosphate

200888
type: SpeciesReference
stoichiometry: 1.0
species: 231570

232339
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Phenylalanyl-tRNA(Phe)

231569
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Adenosyl cobyrinate hexaamide

232262
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cobyrinate

233161
type: Reaction
product: 209538
product: 209526
reactant: 209514
reactant: 209501
fast: false
reversible: false
name: 3-Methylbutanoyl-CoA:(acceptor) 2,3-oxidoreductase

209538
type: SpeciesReference
stoichiometry: 1.0
species: 231914

209526
type: SpeciesReference
stoichiometry: 1.0
species: 231353

231353
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Methylcrotonyl-CoA

209514
type: SpeciesReference
stoichiometry: 1.0
species: 231538

209501
type: SpeciesReference
stoichiometry: 1.0
species: 232376

232376
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Methylbutanoyl-CoA

232186
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: BM: Lipids (OD ml)

233997
type: Reaction
product: 229809
product: 229797
reactant: 229785
reactant: 229773
fast: false
reversible: true
name: Symport: (Inosine:H+)

229809
type: SpeciesReference
stoichiometry: 1.0
species: 232520

229797
type: SpeciesReference
stoichiometry: 1.0
species: 232556

229785
type: SpeciesReference
stoichiometry: 1.0
species: 232166

229773
type: SpeciesReference
stoichiometry: 1.0
species: 232022

232022
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Inosine (E)

233740
type: Reaction
product: 223820
fast: false
reversible: true
name: Exchange: (Thiamin)

223820
type: SpeciesReference
stoichiometry: 1.0
species: 232231

232231
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Thiamin (E)

233629
type: Reaction
product: 221203
product: 221191
reactant: 221179
reactant: 221167
fast: false
reversible: false
name: 2'-Deoxyguanosine 5'-monophosphate phosphohydrolase

221203
type: SpeciesReference
stoichiometry: 1.0
species: 231609

221191
type: SpeciesReference
stoichiometry: 1.0
species: 231777

221179
type: SpeciesReference
stoichiometry: 1.0
species: 231570

221167
type: SpeciesReference
stoichiometry: 1.0
species: 231942

231942
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dGMP

232696
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Copper

233389
type: Reaction
reactant: 215578
reactant: 215590
product: 215638
name: ABC-T: (D-Glucose)
product: 215602
reversible: false
product: 215626
reactant: 215566
fast: false
product: 215614

215578
type: SpeciesReference
stoichiometry: 1.0
species: 231573

215590
type: SpeciesReference
stoichiometry: 1.0
species: 231570

215638
type: SpeciesReference
stoichiometry: 1.0
species: 231609

215602
type: SpeciesReference
stoichiometry: 1.0
species: 232456

215626
type: SpeciesReference
stoichiometry: 1.0
species: 232520

215566
type: SpeciesReference
stoichiometry: 1.0
species: 231681

231681
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: D-Glucose (E)

215614
type: SpeciesReference
stoichiometry: 1.0
species: 231605

232359
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Deoxyadenosine (E)

233864
type: Reaction
product: 226868
fast: false
reversible: true
name: Sink: (Biomass)

226868
type: SpeciesReference
stoichiometry: 1.0
species: 232198

232198
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Biomass (OD ml)

231613
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Glycyl-tRNA(Gly)

232699
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Asn)

233136
type: Reaction
reactant: 208759
reversible: false
product: 208771
reactant: 208735
product: 208796
reactant: 208747
fast: false
product: 208783
name: Oxid Phos: Complex III

208759
type: SpeciesReference
stoichiometry: 2.0
species: 232214

232214
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Halocyanin (oxidized)

208771
type: SpeciesReference
stoichiometry: 1.0
species: 232547

232547
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Menaquinone

208735
type: SpeciesReference
stoichiometry: 1.0
species: 231642

231642
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Menaquinol

208796
type: SpeciesReference
stoichiometry: 2.0
species: 232207

232207
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Halocyanin (reduced)

208747
type: SpeciesReference
stoichiometry: 2.0
species: 232520

208783
type: SpeciesReference
stoichiometry: 2.0
species: 232166

234060
type: Reaction
fast: false
reactant: 231699
product: 231747
reactant: 231711
name: ABC-T: (Ferrichrome)
product: 231723
reactant: 231687
product: 231735
reversible: false
product: 231760

231699
type: SpeciesReference
stoichiometry: 1.0
species: 231573

231747
type: SpeciesReference
stoichiometry: 1.0
species: 231609

231711
type: SpeciesReference
stoichiometry: 1.0
species: 231570

231723
type: SpeciesReference
stoichiometry: 1.0
species: 231610

231610
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Ferrichrome

231687
type: SpeciesReference
stoichiometry: 1.0
species: 231910

231910
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Ferrichrome (E)

231735
type: SpeciesReference
stoichiometry: 1.0
species: 231605

231760
type: SpeciesReference
stoichiometry: 1.0
species: 232520

232230
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 1-(2-Carboxyphenylamino)-1'-deoxy-D-ribulose 5'-phosphate

233256
type: Reaction
product: 212133
product: 212121
reactant: 212109
reactant: 212097
fast: false
reversible: true
name: Symport: (L-Methionine:H+)

212133
type: SpeciesReference
stoichiometry: 1.0
species: 232520

212121
type: SpeciesReference
stoichiometry: 1.0
species: 232668

212109
type: SpeciesReference
stoichiometry: 1.0
species: 232166

212097
type: SpeciesReference
stoichiometry: 1.0
species: 231842

231842
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Methionine (E)

231746
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Citrate (E)

232867
type: Reaction
product: 200827
product: 200815
product: 200803
reactant: 200791
reactant: 200779
fast: false
reversible: true
name: Indole-3-acetamide amidohydrolase

200827
type: SpeciesReference
stoichiometry: 1.0
species: 232520

200815
type: SpeciesReference
stoichiometry: 1.0
species: 231545

200803
type: SpeciesReference
stoichiometry: 1.0
species: 232415

232415
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Indole-3-acetate

200791
type: SpeciesReference
stoichiometry: 1.0
species: 231570

200779
type: SpeciesReference
stoichiometry: 1.0
species: 231534

231534
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Indole-3-acetamide

232968
type: Reaction
reactant: 203834
reversible: false
name: L-Threonine:tRNA(Thr) ligase (AMP-forming)
product: 203882
product: 203870
reactant: 203858
reactant: 203846
fast: false
product: 203894
product: 203906

203834
type: SpeciesReference
stoichiometry: 1.0
species: 231573

203882
type: SpeciesReference
stoichiometry: 1.0
species: 231513

203870
type: SpeciesReference
stoichiometry: 1.0
species: 232396

203858
type: SpeciesReference
stoichiometry: 1.0
species: 232532

232532
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Thr)

203846
type: SpeciesReference
stoichiometry: 1.0
species: 232255

203894
type: SpeciesReference
stoichiometry: 1.0
species: 232091

232091
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Threonyl-tRNA(Thr)

203906
type: SpeciesReference
stoichiometry: 1.0
species: 232520

233693
type: Reaction
product: 222722
product: 222710
reactant: 222698
reactant: 222686
fast: false
reversible: true
name: ATP:nucleoside-diphosphate phosphatransferase

222722
type: SpeciesReference
stoichiometry: 1.0
species: 232078

232078
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dITP

222710
type: SpeciesReference
stoichiometry: 1.0
species: 231605

222698
type: SpeciesReference
stoichiometry: 1.0
species: 232058

232058
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dIDP

222686
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233949
type: Reaction
product: 228437
product: 228425
reactant: 228413
fast: false
reversible: true
name: (S)-Hydroxydecanoyl-CoA hydro-lyase

228437
type: SpeciesReference
stoichiometry: 1.0
species: 231570

228425
type: SpeciesReference
stoichiometry: 1.0
species: 231693

231693
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: trans-Dec-2-enoyl-CoA

228413
type: SpeciesReference
stoichiometry: 1.0
species: 232138

232363
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Glutathione

233028
type: Reaction
product: 205403
fast: false
reactant: 205355
product: 205415
product: 205427
name: L-Cysteine:tRNA(Cys) ligase (AMP-forming)
reactant: 205379
product: 205391
reactant: 205367
reversible: false

205403
type: SpeciesReference
stoichiometry: 1.0
species: 231513

205355
type: SpeciesReference
stoichiometry: 1.0
species: 231573

205415
type: SpeciesReference
stoichiometry: 1.0
species: 231661

231661
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Cysteinyl-tRNA(Cys)

205427
type: SpeciesReference
stoichiometry: 1.0
species: 232520

205379
type: SpeciesReference
stoichiometry: 1.0
species: 232667

232667
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Cys)

205391
type: SpeciesReference
stoichiometry: 1.0
species: 232396

205367
type: SpeciesReference
stoichiometry: 1.0
species: 232567

232872
type: Reaction
product: 200960
product: 200948
reactant: 200936
fast: false
reversible: true
name: 3-Hydroxypropionyl-CoA hydro-lyase

200960
type: SpeciesReference
stoichiometry: 1.0
species: 231570

200948
type: SpeciesReference
stoichiometry: 1.0
species: 232392

232392
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Propenoyl-CoA

200936
type: SpeciesReference
stoichiometry: 1.0
species: 232416

232416
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Hydroxypropionyl-CoA

234200
type: Reaction
product: 235899
product: 235887
product: 235875
reactant: 235863
reactant: 235851
fast: false
reversible: false
name: 3-Phospho-D-glyceroyl phosphate phosphohydrolase

235899
type: SpeciesReference
stoichiometry: 1.0
species: 232520

235887
type: SpeciesReference
stoichiometry: 1.0
species: 231609

235875
type: SpeciesReference
stoichiometry: 1.0
species: 232323

235863
type: SpeciesReference
stoichiometry: 1.0
species: 231570

235851
type: SpeciesReference
stoichiometry: 1.0
species: 231421

231421
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Phospho-D-glyceroyl phosphate

231973
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Glyceraldehyde

231714
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (R)-3-Hydroxy-3-methyl-2-oxopentanoate

233837
type: Reaction
product: 226372
reversible: true
reactant: 226300
reactant: 226324
product: 226348
reactant: 226336
product: 226396
name: 6.3.5.10
product: 226360
reactant: 226312
fast: false
product: 226384

226372
type: SpeciesReference
stoichiometry: 4.0
species: 231609

226300
type: SpeciesReference
stoichiometry: 1.0
species: 231574

231574
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Adenosyl cobyrinate a,c diamide

226324
type: SpeciesReference
stoichiometry: 4.0
species: 231573

226348
type: SpeciesReference
stoichiometry: 1.0
species: 231569

226336
type: SpeciesReference
stoichiometry: 4.0
species: 231570

226396
type: SpeciesReference
stoichiometry: 4.0
species: 232520

226360
type: SpeciesReference
stoichiometry: 4.0
species: 232372

226312
type: SpeciesReference
stoichiometry: 4.0
species: 232612

232612
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Glutamine

226384
type: SpeciesReference
stoichiometry: 4.0
species: 231605

233736
type: Reaction
product: 223796
product: 223783
reactant: 223771
reactant: 223759
fast: false
reversible: false
name: 3.6.1.-

223796
type: SpeciesReference
stoichiometry: 1.0
species: 231609

223783
type: SpeciesReference
stoichiometry: 1.0
species: 231966

231966
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-

223771
type: SpeciesReference
stoichiometry: 1.0
species: 231570

223759
type: SpeciesReference
stoichiometry: 1.0
species: 231626

231626
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Dihydroneopterin phosphate

231717
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Nicotinamide D-ribonucleotide

232671
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Phosphoenolpyruvate

232290
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-erythro-3-Methylmalate

231941
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 4-Aminobenzoate

233609
type: Reaction
product: 220667
reactant: 220654
fast: false
reversible: true
name: (S)-2-Acetolactate methylmutase

220667
type: SpeciesReference
stoichiometry: 1.0
species: 231586

231586
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Hydroxy-3-methyl-2-oxobutanoic acid

220654
type: SpeciesReference
stoichiometry: 1.0
species: 232399

232399
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-2-Acetolactate

232086
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-(4-Hydroxyphenyl)pyruvate

233673
type: Reaction
product: 222361
product: 222349
reactant: 222337
reactant: 222325
fast: false
reversible: true
name: L-Phenylalanine:2-oxoglutarate aminotransferase

222361
type: SpeciesReference
stoichiometry: 1.0
species: 232372

222349
type: SpeciesReference
stoichiometry: 1.0
species: 232584

232584
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Phenylpyruvate

222337
type: SpeciesReference
stoichiometry: 1.0
species: 232375

222325
type: SpeciesReference
stoichiometry: 1.0
species: 232683

232683
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Phenylalanine

234021
type: Reaction
product: 230390
product: 230378
reactant: 230366
reactant: 230354
fast: false
reversible: true
name: Symport: (L-Citrulline:H+)

230390
type: SpeciesReference
stoichiometry: 1.0
species: 232520

230378
type: SpeciesReference
stoichiometry: 1.0
species: 231758

231758
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Citrulline

230366
type: SpeciesReference
stoichiometry: 1.0
species: 232166

230354
type: SpeciesReference
stoichiometry: 1.0
species: 232380

232380
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Citrulline (E)

231349
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Glycerone phosphate

231437
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 4-Phospho-L-aspartate

234249
type: Reaction
reactant: 237279
reversible: false
product: 237291
fast: false
product: 237315
reactant: 237255
product: 237303
reactant: 237267
name: 1.8.7.1

237279
type: SpeciesReference
stoichiometry: 1.0
species: 232520

237291
type: SpeciesReference
stoichiometry: 1.0
species: 232492

232492
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Hydrogen sulfide

237315
type: SpeciesReference
stoichiometry: 6.0
species: 231413

231413
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Oxidized ferredoxin

237255
type: SpeciesReference
stoichiometry: 1.0
species: 232563

237303
type: SpeciesReference
stoichiometry: 3.0
species: 231570

237267
type: SpeciesReference
stoichiometry: 6.0
species: 231402

231402
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Reduced ferredoxin

232794
type: Reaction
product: 198820
product: 198808
product: 198796
reactant: 198784
reactant: 198772
fast: false
reversible: false
name: 6.3.3.2

198820
type: SpeciesReference
stoichiometry: 1.0
species: 231673

198808
type: SpeciesReference
stoichiometry: 1.0
species: 231609

198796
type: SpeciesReference
stoichiometry: 1.0
species: 231605

198784
type: SpeciesReference
stoichiometry: 1.0
species: 231426

198772
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232054
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Deoxyribose

232057
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole

232267
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Phytoene

232187
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Glycolaldehyde (E)

231497
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Porphobilinogen

233437
type: Reaction
product: 216352
reactant: 216340
fast: false
reversible: true
name: Reversible-T: (Ammonia)

216352
type: SpeciesReference
stoichiometry: 1.0
species: 231545

216340
type: SpeciesReference
stoichiometry: 1.0
species: 231737

232515
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-Malate

234028
type: Reaction
product: 230535
product: 230523
reactant: 230511
reactant: 230499
fast: false
reversible: true
name: Symport: (Hypoxanthine:H+)

230535
type: SpeciesReference
stoichiometry: 1.0
species: 232520

230523
type: SpeciesReference
stoichiometry: 1.0
species: 232600

232600
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Hypoxanthine

230511
type: SpeciesReference
stoichiometry: 1.0
species: 232166

230499
type: SpeciesReference
stoichiometry: 1.0
species: 232159

232159
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Hypoxanthine (E)

232648
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Carbamoyl phosphate

232025
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Apoprotein

231918
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Indole

231373
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: IDP

233808
type: Reaction
reactant: 225501
reactant: 225513
product: 225549
product: 225561
fast: false
reversible: false
product: 225537
name: ABC-T: (3-Phospho-glycerate)
reactant: 225525
product: 225573

225501
type: SpeciesReference
stoichiometry: 1.0
species: 231958

231958
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: 3-Phospho-D-Glycerate (E)

225513
type: SpeciesReference
stoichiometry: 1.0
species: 231573

225549
type: SpeciesReference
stoichiometry: 1.0
species: 231605

225561
type: SpeciesReference
stoichiometry: 1.0
species: 231609

225537
type: SpeciesReference
stoichiometry: 1.0
species: 232323

225525
type: SpeciesReference
stoichiometry: 1.0
species: 231570

225573
type: SpeciesReference
stoichiometry: 1.0
species: 232520

231541
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Tetradecanoyl-CoA

233421
type: Reaction
product: 216048
reactant: 216036
fast: false
reversible: true
name: Diffusion: (Oxygen)

216048
type: SpeciesReference
stoichiometry: 1.0
species: 231606

216036
type: SpeciesReference
stoichiometry: 1.0
species: 231774

231774
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Oxygen (E)

232907
type: Reaction
product: 202096
name: UTP:ammonia ligase(ADP-forming)
fast: false
product: 202072
reversible: false
reactant: 202048
reactant: 202036
product: 202108
product: 202084
reactant: 202060

202096
type: SpeciesReference
stoichiometry: 1.0
species: 232608

232608
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: CTP

202072
type: SpeciesReference
stoichiometry: 1.0
species: 231605

202048
type: SpeciesReference
stoichiometry: 1.0
species: 232675

202036
type: SpeciesReference
stoichiometry: 1.0
species: 231573

202108
type: SpeciesReference
stoichiometry: 1.0
species: 232520

202084
type: SpeciesReference
stoichiometry: 1.0
species: 231609

202060
type: SpeciesReference
stoichiometry: 1.0
species: 231545

232535
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Palmitoyl-CoA

231881
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate

231674
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: trans,trans-Farnesyl diphosphate

231922
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: LL-2,6-Diaminoheptanedioate

233408
type: Reaction
product: 215892
product: 215880
reactant: 215868
reactant: 215855
fast: false
reversible: true
name: ATP:nucleoside-diphosphate phosphatransferase

215892
type: SpeciesReference
stoichiometry: 1.0
species: 231573

215880
type: SpeciesReference
stoichiometry: 1.0
species: 231605

215868
type: SpeciesReference
stoichiometry: 1.0
species: 231605

215855
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233912
type: Reaction
product: 227845
product: 227833
reactant: 227821
reactant: 227809
fast: false
reversible: false
name: 3.1.3.73

227845
type: SpeciesReference
stoichiometry: 1.0
species: 231609

227833
type: SpeciesReference
stoichiometry: 1.0
species: 232279

227821
type: SpeciesReference
stoichiometry: 1.0
species: 231570

227809
type: SpeciesReference
stoichiometry: 1.0
species: 231985

231985
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: N1-(5-Phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole

233561
type: Reaction
product: 219372
product: 219360
reactant: 219348
reactant: 219335
fast: false
reversible: false
name: Nicotinate D-ribonucleotide:pyrophosphate phosphoribosyltransferase

219372
type: SpeciesReference
stoichiometry: 1.0
species: 231513

219360
type: SpeciesReference
stoichiometry: 1.0
species: 232111

232111
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Nicotinate D-ribonucleotide

219348
type: SpeciesReference
stoichiometry: 1.0
species: 231310

219335
type: SpeciesReference
stoichiometry: 1.0
species: 231345

231345
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Nicotinate

233817
type: Reaction
product: 225828
product: 225816
reactant: 225803
reactant: 225791
reactant: 225779
fast: false
reversible: true
name: Succinyl-CoA:2,3,4,5-tetrahydropyridine-2,6-dicarboxylate

225828
type: SpeciesReference
stoichiometry: 1.0
species: 231990

225816
type: SpeciesReference
stoichiometry: 1.0
species: 231517

225803
type: SpeciesReference
stoichiometry: 1.0
species: 231570

225791
type: SpeciesReference
stoichiometry: 1.0
species: 231342

225779
type: SpeciesReference
stoichiometry: 1.0
species: 232568

232568
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Succinyl-CoA

232916
type: Reaction
product: 202423
product: 202411
reactant: 202399
reactant: 202386
fast: false
reversible: false
name: CTP aminohydrolase

202423
type: SpeciesReference
stoichiometry: 1.0
species: 231545

202411
type: SpeciesReference
stoichiometry: 1.0
species: 232675

202399
type: SpeciesReference
stoichiometry: 1.0
species: 231570

202386
type: SpeciesReference
stoichiometry: 1.0
species: 232608

232371
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: N-(L-Arginino)succinate

233884
type: Reaction
product: 227242
fast: false
reversible: true
name: Exchange: (Malate)

227242
type: SpeciesReference
stoichiometry: 1.0
species: 231781

231781
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: (S)-Malate (E)

231982
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Alanine (E)

233789
type: Reaction
product: 224996
product: 224984
reactant: 224972
fast: false
reversible: true
name: 2-Phospho-D-glucerate hydro-lyase

224996
type: SpeciesReference
stoichiometry: 1.0
species: 231570

224984
type: SpeciesReference
stoichiometry: 1.0
species: 232671

224972
type: SpeciesReference
stoichiometry: 1.0
species: 231498

231498
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Phospho-D-glycerate

233489
type: Reaction
product: 217306
product: 217294
reactant: 217282
reactant: 217269
fast: false
reversible: false
name: 2'-Deoxyadenosine 5'-monophosphate phosphohydrolase

217306
type: SpeciesReference
stoichiometry: 1.0
species: 231609

217294
type: SpeciesReference
stoichiometry: 1.0
species: 231874

231874
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Deoxyadenosine

217282
type: SpeciesReference
stoichiometry: 1.0
species: 231570

217269
type: SpeciesReference
stoichiometry: 1.0
species: 231937

231937
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dAMP

231645
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Folate (E)

233033
type: Reaction
product: 205535
fast: false
reversible: true
name: Exchange: (3-P-D-Glycerate)

205535
type: SpeciesReference
stoichiometry: 1.0
species: 231958

232980
type: Reaction
product: 204075
fast: false
reversible: true
name: Exchange: (Guanine)

204075
type: SpeciesReference
stoichiometry: 1.0
species: 232095

232095
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Guanine (E)

233536
type: Reaction
reactant: 218599
fast: false
reactant: 218575
reactant: 218587
product: 218635
product: 218611
name: ABC-T: (Cobamide Coenzyme)
product: 218647
product: 218623
reversible: false

218599
type: SpeciesReference
stoichiometry: 1.0
species: 231570

218575
type: SpeciesReference
stoichiometry: 1.0
species: 231962

218587
type: SpeciesReference
stoichiometry: 1.0
species: 231573

218635
type: SpeciesReference
stoichiometry: 1.0
species: 232520

218611
type: SpeciesReference
stoichiometry: 1.0
species: 232314

218647
type: SpeciesReference
stoichiometry: 1.0
species: 231609

218623
type: SpeciesReference
stoichiometry: 1.0
species: 231605

233656
type: Reaction
product: 221844
reactant: 221820
product: 221832
reactant: 221796
reactant: 221808
reversible: true
product: 221856
name: D-Glyceraldehyde-3-phosphate:NADP+ oxidoreductase(phosphorylating)
fast: false

221844
type: SpeciesReference
stoichiometry: 1.0
species: 231598

221820
type: SpeciesReference
stoichiometry: 1.0
species: 231597

221832
type: SpeciesReference
stoichiometry: 1.0
species: 231421

221796
type: SpeciesReference
stoichiometry: 1.0
species: 231313

231313
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Glyceraldehyde 3-phosphate

221808
type: SpeciesReference
stoichiometry: 1.0
species: 231609

221856
type: SpeciesReference
stoichiometry: 1.0
species: 232520

233809
type: Reaction
product: 225621
product: 225609
reactant: 225597
reactant: 225585
fast: false
reversible: false
name: Antiport: (Na+:H+)

225621
type: SpeciesReference
stoichiometry: 1.0
species: 232155

232155
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Sodium (pmf associated)

225609
type: SpeciesReference
stoichiometry: 2.0
species: 232520

225597
type: SpeciesReference
stoichiometry: 2.0
species: 232166

225585
type: SpeciesReference
stoichiometry: 1.0
species: 232041

232041
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Sodium

234108
type: Reaction
reversible: false
product: 232999
reactant: 232963
fast: false
reactant: 232975
product: 233023
reactant: 232951
product: 232987
name: IMP:L-aspartate ligase (GDP-forming)
product: 233011

232999
type: SpeciesReference
stoichiometry: 1.0
species: 231609

232963
type: SpeciesReference
stoichiometry: 1.0
species: 231438

232975
type: SpeciesReference
stoichiometry: 1.0
species: 232243

233023
type: SpeciesReference
stoichiometry: 1.0
species: 232520

232951
type: SpeciesReference
stoichiometry: 1.0
species: 232283

232283
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: GTP

232987
type: SpeciesReference
stoichiometry: 1.0
species: 232467

232467
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: GDP

233011
type: SpeciesReference
stoichiometry: 1.0
species: 231354

231354
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: N6-(1,2-Dicarboxyethyl)-AMP

233773
type: Reaction
product: 224651
product: 224639
reactant: 224627
reactant: 224615
fast: false
reversible: false
name: (S)-2-Acetolactate pyruvate-lyase (carboxylating)

224651
type: SpeciesReference
stoichiometry: 1.0
species: 232623

232623
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Thiamin diphosphate

224639
type: SpeciesReference
stoichiometry: 1.0
species: 232399

224627
type: SpeciesReference
stoichiometry: 1.0
species: 232411

224615
type: SpeciesReference
stoichiometry: 1.0
species: 232258

234188
type: Reaction
product: 235599
product: 235587
reactant: 235575
reactant: 235563
fast: false
reversible: false
name: L-Glutamate 1-carboxy-lyase

235599
type: SpeciesReference
stoichiometry: 1.0
species: 231518

235587
type: SpeciesReference
stoichiometry: 1.0
species: 231793

231793
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 4-Aminobutanoate

235575
type: SpeciesReference
stoichiometry: 1.0
species: 232520

235563
type: SpeciesReference
stoichiometry: 1.0
species: 232372

233969
type: Reaction
product: 229049
product: 229037
product: 229025
reactant: 229013
reactant: 229001
fast: false
reversible: false
name: Carbamoyl-phosphate:L-aspartate carbamoyltransferase

229049
type: SpeciesReference
stoichiometry: 1.0
species: 232520

229037
type: SpeciesReference
stoichiometry: 1.0
species: 231789

231789
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: N-Carbamoyl-L-aspartate

229025
type: SpeciesReference
stoichiometry: 1.0
species: 231609

229013
type: SpeciesReference
stoichiometry: 1.0
species: 232243

229001
type: SpeciesReference
stoichiometry: 1.0
species: 232648

233640
type: Reaction
product: 221481
product: 221469
product: 221457
reactant: 221445
reactant: 221433
fast: false
reversible: false
name: ADPribose ribophosphohydrolase

221481
type: SpeciesReference
stoichiometry: 2.0
species: 232520

221469
type: SpeciesReference
stoichiometry: 1.0
species: 231314

231314
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Ribose 5-phosphate

221457
type: SpeciesReference
stoichiometry: 1.0
species: 232396

221445
type: SpeciesReference
stoichiometry: 1.0
species: 231570

221433
type: SpeciesReference
stoichiometry: 1.0
species: 231689

231689
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: ADPribose

233245
type: Reaction
product: 211892
product: 211880
reactant: 211868
reactant: 211856
fast: false
reversible: true
name: Symport: (L-Glutamate:H+)

211892
type: SpeciesReference
stoichiometry: 1.0
species: 232520

211880
type: SpeciesReference
stoichiometry: 1.0
species: 232372

211868
type: SpeciesReference
stoichiometry: 1.0
species: 232166

211856
type: SpeciesReference
stoichiometry: 1.0
species: 231698

231318
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Glycerol

233836
type: Reaction
product: 226276
product: 226264
fast: false
product: 226288
reactant: 226227
product: 226252
reactant: 226215
reversible: true
reactant: 226239
name: 2.5.1.17

226276
type: SpeciesReference
stoichiometry: 1.0
species: 231609

226264
type: SpeciesReference
stoichiometry: 1.0
species: 231513

226288
type: SpeciesReference
stoichiometry: 1.0
species: 232520

226227
type: SpeciesReference
stoichiometry: 1.0
species: 231573

226252
type: SpeciesReference
stoichiometry: 1.0
species: 231574

226215
type: SpeciesReference
stoichiometry: 1.0
species: 231561

231561
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cob(I)yrinate a,c diamide

226239
type: SpeciesReference
stoichiometry: 1.0
species: 231570

234212
type: Reaction
product: 236191
fast: false
product: 236216
reactant: 236167
reversible: false
reactant: 236155
product: 236204
name: 2-Hydroxybutane-1,2,4-tricarboxylate 2-oxoglutarate-lyase
reactant: 236179

236191
type: SpeciesReference
stoichiometry: 1.0
species: 231894

231894
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Hydroxybutane-1,2,4-tricarboxylate

236216
type: SpeciesReference
stoichiometry: 1.0
species: 232520

236167
type: SpeciesReference
stoichiometry: 1.0
species: 231570

236155
type: SpeciesReference
stoichiometry: 1.0
species: 232407

236204
type: SpeciesReference
stoichiometry: 1.0
species: 231517

236179
type: SpeciesReference
stoichiometry: 1.0
species: 232375

234117
type: Reaction
product: 233502
product: 233490
product: 233478
reactant: 233466
reactant: 233454
fast: false
reversible: true
name: 1.2.1.70

233502
type: SpeciesReference
stoichiometry: 1.0
species: 231597

233490
type: SpeciesReference
stoichiometry: 1.0
species: 232592

232592
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Glu)

233478
type: SpeciesReference
stoichiometry: 1.0
species: 232599

232599
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-4-Amino-5-oxopentanoate

233466
type: SpeciesReference
stoichiometry: 1.0
species: 231598

233454
type: SpeciesReference
stoichiometry: 1.0
species: 232139

232139
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Glutamyl-tRNA(Glu)

231826
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Phenylalanine (E)

232981
type: Reaction
product: 204135
product: 204123
reactant: 204111
reactant: 204099
reactant: 204087
fast: false
reversible: false
name: 5-Amino-6-(5-phosphoribitylamino)uracil:NADP+ 1'-oxidoreductase

204135
type: SpeciesReference
stoichiometry: 1.0
species: 231597

204123
type: SpeciesReference
stoichiometry: 1.0
species: 231329

204111
type: SpeciesReference
stoichiometry: 1.0
species: 232520

204099
type: SpeciesReference
stoichiometry: 1.0
species: 231598

204087
type: SpeciesReference
stoichiometry: 1.0
species: 231814

231814
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5-Amino-6-(5'-phosphoribosylamino)uracil

232443
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-2-Aceto-2-hydroxybutanoate

233537
type: Reaction
product: 218695
reversible: true
product: 218707
reactant: 218671
fast: false
name: L-Aspartate-4-semialdehyde:NADP+ oxidoreductase (phosphorylating)
reactant: 218659
product: 218719
reactant: 218683

218695
type: SpeciesReference
stoichiometry: 1.0
species: 231437

218707
type: SpeciesReference
stoichiometry: 1.0
species: 231598

218671
type: SpeciesReference
stoichiometry: 1.0
species: 231609

218659
type: SpeciesReference
stoichiometry: 1.0
species: 231669

231669
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Aspartate 4-semialdehyde

218719
type: SpeciesReference
stoichiometry: 1.0
species: 232520

218683
type: SpeciesReference
stoichiometry: 1.0
species: 231597

232026
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Deoxycytidine (E)

233480
type: Reaction
reactant: 217124
fast: false
product: 217148
reactant: 217112
name: Propanoate:CoA ligase (ADP-forming)
product: 217172
reactant: 217136
reversible: false
product: 217160

217124
type: SpeciesReference
stoichiometry: 1.0
species: 232591

232591
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Propanoate

217148
type: SpeciesReference
stoichiometry: 1.0
species: 231605

217112
type: SpeciesReference
stoichiometry: 1.0
species: 231573

217172
type: SpeciesReference
stoichiometry: 1.0
species: 231394

231394
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Propanoyl-CoA

217136
type: SpeciesReference
stoichiometry: 1.0
species: 231517

217160
type: SpeciesReference
stoichiometry: 1.0
species: 231609

233385
type: Reaction
product: 215468
name: ABC-T: (Adenosine-GDP-Cobinamide)
fast: false
reactant: 215444
reversible: false
product: 215505
product: 215493
reactant: 215432
product: 215481
reactant: 215456

215468
type: SpeciesReference
stoichiometry: 1.0
species: 231546

215444
type: SpeciesReference
stoichiometry: 1.0
species: 231573

215505
type: SpeciesReference
stoichiometry: 1.0
species: 232520

215493
type: SpeciesReference
stoichiometry: 1.0
species: 231609

215432
type: SpeciesReference
stoichiometry: 1.0
species: 232303

232303
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Adenosine-GDP-Cobinamide (E)

215481
type: SpeciesReference
stoichiometry: 1.0
species: 231605

215456
type: SpeciesReference
stoichiometry: 1.0
species: 231570

233132
type: Reaction
reactant: 208603
name: Oxid Phos: Complex V
product: 208651
fast: false
reversible: true
reactant: 208591
product: 208639
reactant: 208615
product: 208627

208603
type: SpeciesReference
stoichiometry: 1.0
species: 231609

208651
type: SpeciesReference
stoichiometry: 9.0
species: 232520

208591
type: SpeciesReference
stoichiometry: 1.0
species: 231605

208639
type: SpeciesReference
stoichiometry: 1.0
species: 231570

208615
type: SpeciesReference
stoichiometry: 10.0
species: 232166

208627
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233404
type: Reaction
product: 215830
product: 215818
reactant: 215806
reactant: 215794
reactant: 215782
fast: false
reversible: false
name: 5,6,7,8-Tetrahydrofolate:NADP+ oxidoreductase

215830
type: SpeciesReference
stoichiometry: 1.0
species: 231597

215818
type: SpeciesReference
stoichiometry: 1.0
species: 231397

215806
type: SpeciesReference
stoichiometry: 1.0
species: 232520

215794
type: SpeciesReference
stoichiometry: 1.0
species: 231598

215782
type: SpeciesReference
stoichiometry: 1.0
species: 231581

231581
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Dihydrofolate

232576
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Val)

232195
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Oxalosuccinate

232239
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: BM: Energy (OD ml)

233009
type: Reaction
product: 205065
product: 205053
reactant: 205041
reactant: 205029
fast: false
reversible: true
name: ATP:nucleoside-diphosphate phosphatransferase

205065
type: SpeciesReference
stoichiometry: 1.0
species: 232283

205053
type: SpeciesReference
stoichiometry: 1.0
species: 231605

205041
type: SpeciesReference
stoichiometry: 1.0
species: 232467

205029
type: SpeciesReference
stoichiometry: 1.0
species: 231573

234109
type: Reaction
product: 233134
product: 233071
product: 233059
reactant: 233047
reactant: 233035
fast: false
reversible: false
name: dATP:pyruvate O2-phosphotransferase

233134
type: SpeciesReference
stoichiometry: 1.0
species: 232520

233071
type: SpeciesReference
stoichiometry: 1.0
species: 232671

233059
type: SpeciesReference
stoichiometry: 1.0
species: 231565

231565
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dADP

233047
type: SpeciesReference
stoichiometry: 1.0
species: 232411

233035
type: SpeciesReference
stoichiometry: 1.0
species: 231449

231449
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dATP

233252
type: Reaction
product: 212036
product: 212024
reactant: 212012
reactant: 212000
fast: false
reversible: true
name: Symport: (Tryptophan:H+)

212036
type: SpeciesReference
stoichiometry: 1.0
species: 232520

212024
type: SpeciesReference
stoichiometry: 1.0
species: 232679

232679
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Tryptophan

212012
type: SpeciesReference
stoichiometry: 1.0
species: 232166

212000
type: SpeciesReference
stoichiometry: 1.0
species: 231834

231834
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Tryptophan (E)

231469
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Adenylylsulfate

233085
type: Reaction
name: 3-Carboxy-3-hydroxy-4-methylpentanoate 3-methyl-2-oxobutanoate-lyase
reversible: false
product: 206925
reactant: 206888
reactant: 206901
product: 206937
product: 206913
fast: false
reactant: 206876

206925
type: SpeciesReference
stoichiometry: 1.0
species: 231517

206888
type: SpeciesReference
stoichiometry: 1.0
species: 232475

206901
type: SpeciesReference
stoichiometry: 1.0
species: 231570

206937
type: SpeciesReference
stoichiometry: 1.0
species: 232520

206913
type: SpeciesReference
stoichiometry: 1.0
species: 232499

232499
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Isopropylmalate

206876
type: SpeciesReference
stoichiometry: 1.0
species: 232407

232620
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: beta-Carotene

231381
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Hexadecanoic acid

231850
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: meso-2,6-Diaminoheptanedioate

232843
type: Reaction
product: 200158
product: 200146
product: 200134
reactant: 200122
reactant: 200110
fast: false
reversible: false
name: LeuB

200158
type: SpeciesReference
stoichiometry: 1.0
species: 231589

200146
type: SpeciesReference
stoichiometry: 1.0
species: 231518

200134
type: SpeciesReference
stoichiometry: 1.0
species: 231362

200122
type: SpeciesReference
stoichiometry: 1.0
species: 231593

200110
type: SpeciesReference
stoichiometry: 1.0
species: 232290

231682
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Manganese (E)

232299
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Seryl-tRNA(Ser)

234056
type: Reaction
reactant: 231252
reactant: 231228
product: 231276
name: ABC-T: (Oligopeptide)
product: 231264
product: 231288
reversible: false
product: 231300
reactant: 231240
fast: false

231252
type: SpeciesReference
stoichiometry: 1.0
species: 231570

231228
type: SpeciesReference
stoichiometry: 1.0
species: 232066

232066
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Oligopeptide (E)

231276
type: SpeciesReference
stoichiometry: 1.0
species: 231605

231264
type: SpeciesReference
stoichiometry: 1.0
species: 232559

232559
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Oligopeptide

231288
type: SpeciesReference
stoichiometry: 1.0
species: 231609

231300
type: SpeciesReference
stoichiometry: 1.0
species: 232520

231240
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232710
type: Reaction
reactant: 196412
reversible: false
reactant: 196424
product: 196461
fast: false
product: 196436
product: 196473
name: 4.4.1.1; 4.4.1.8
product: 196448

196412
type: SpeciesReference
stoichiometry: 1.0
species: 232567

196424
type: SpeciesReference
stoichiometry: 1.0
species: 231570

196461
type: SpeciesReference
stoichiometry: 1.0
species: 231545

196436
type: SpeciesReference
stoichiometry: 1.0
species: 232492

196473
type: SpeciesReference
stoichiometry: 2.0
species: 232520

196448
type: SpeciesReference
stoichiometry: 1.0
species: 232411

232170
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Lycopene

232210
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Isopentenyl phosphate

233133
type: Reaction
reactant: 208663
reactant: 208687
product: 208711
product: 208723
product: 208699
reactant: 208675
reversible: false
name: Oxid Phos: C I (Ferredoxin)
fast: false

208663
type: SpeciesReference
stoichiometry: 1.0
species: 231402

208687
type: SpeciesReference
stoichiometry: 3.0
species: 232520

208711
type: SpeciesReference
stoichiometry: 1.0
species: 231642

208723
type: SpeciesReference
stoichiometry: 2.0
species: 232166

208699
type: SpeciesReference
stoichiometry: 1.0
species: 231413

208675
type: SpeciesReference
stoichiometry: 1.0
species: 232547

233965
type: Reaction
product: 228916
product: 228904
reactant: 228891
reactant: 228878
fast: false
reversible: false
name: MoCo Metabolism

228916
type: SpeciesReference
stoichiometry: 1.0
species: 231513

228904
type: SpeciesReference
stoichiometry: 1.0
species: 232219

232219
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: MoCo dinucleotide (Guanine)

228891
type: SpeciesReference
stoichiometry: 1.0
species: 232283

228878
type: SpeciesReference
stoichiometry: 1.0
species: 232218

232218
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Molybdenum cofactor

233796
type: Reaction
product: 225140
product: 225128
reactant: 225116
fast: false
reversible: false
name: L-serine ammonia-lyase

225140
type: SpeciesReference
stoichiometry: 1.0
species: 231545

225128
type: SpeciesReference
stoichiometry: 1.0
species: 232411

225116
type: SpeciesReference
stoichiometry: 1.0
species: 232624

233712
type: Reaction
product: 223230
product: 223218
reactant: 223206
reactant: 223194
fast: false
reversible: false
name: 2-Methylpropanoyl-CoA:(acceptor) 2,3-oxidoreductase

223230
type: SpeciesReference
stoichiometry: 1.0
species: 231914

223218
type: SpeciesReference
stoichiometry: 1.0
species: 231382

231382
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Methylprop-2-enoyl-CoA

223206
type: SpeciesReference
stoichiometry: 1.0
species: 231538

223194
type: SpeciesReference
stoichiometry: 1.0
species: 231490

231490
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Methylpropanoyl-CoA

233832
type: Reaction
product: 226155
product: 226143
product: 226131
reactant: 226119
reactant: 226107
fast: false
reversible: false
name: (S)-Malate:NADP+ oxidoreductase(oxaloacetate-decarboxylating)

226155
type: SpeciesReference
stoichiometry: 1.0
species: 231598

226143
type: SpeciesReference
stoichiometry: 1.0
species: 231518

226131
type: SpeciesReference
stoichiometry: 1.0
species: 232411

226119
type: SpeciesReference
stoichiometry: 1.0
species: 231597

226107
type: SpeciesReference
stoichiometry: 1.0
species: 232515

233000
type: Reaction
reactant: 204671
reactant: 204647
name: Glycine:tRNA(Gly) ligase (AMP-forming)
product: 204720
product: 204708
product: 204683
reversible: false
product: 204695
reactant: 204659
fast: false

204671
type: SpeciesReference
stoichiometry: 1.0
species: 232631

232631
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Gly)

204647
type: SpeciesReference
stoichiometry: 1.0
species: 231573

204720
type: SpeciesReference
stoichiometry: 1.0
species: 232520

204708
type: SpeciesReference
stoichiometry: 1.0
species: 231613

204683
type: SpeciesReference
stoichiometry: 1.0
species: 232396

204695
type: SpeciesReference
stoichiometry: 1.0
species: 231513

204659
type: SpeciesReference
stoichiometry: 1.0
species: 232420

232006
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Betaine (E)

231653
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: N-Methylhydantoin

233104
type: Reaction
reactant: 207758
reactant: 207782
reactant: 207770
name: Growth: RNA
reversible: false
fast: false
product: 207794
reactant: 207746
product: 207807

207758
type: SpeciesReference
stoichiometry: 21.16
species: 232675

207782
type: SpeciesReference
stoichiometry: 12.21
species: 232283

207770
type: SpeciesReference
stoichiometry: 12.21
species: 232608

207794
type: SpeciesReference
stoichiometry: 66.74
species: 231513

207746
type: SpeciesReference
stoichiometry: 21.16
species: 231573

207807
type: SpeciesReference
stoichiometry: 1.0
species: 232191

232191
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: BM: RNA (OD ml)

232790
type: Reaction
product: 198712
product: 198700
reactant: 198688
reactant: 198676
fast: false
reversible: true
name: Uridine:orthophosphate ribosyltransferase

198712
type: SpeciesReference
stoichiometry: 1.0
species: 231450

198700
type: SpeciesReference
stoichiometry: 1.0
species: 231361

231361
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Uracil

198688
type: SpeciesReference
stoichiometry: 1.0
species: 231609

198676
type: SpeciesReference
stoichiometry: 1.0
species: 232544

232544
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Uridine

233568
type: Reaction
product: 219482
product: 219470
reactant: 219458
fast: false
reversible: false
name: 4.1.3.1

219482
type: SpeciesReference
stoichiometry: 1.0
species: 232250

232250
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Glyoxylate

219470
type: SpeciesReference
stoichiometry: 1.0
species: 232287

232287
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Succinate

219458
type: SpeciesReference
stoichiometry: 1.0
species: 231734

231734
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Isocitrate

233228
type: Reaction
product: 211421
product: 211409
product: 211396
reactant: 211384
fast: false
reversible: false
name: Farnesyl-diphosphate:farnesyl-diphosphate farnesyltransferase

211421
type: SpeciesReference
stoichiometry: 1.0
species: 232520

211409
type: SpeciesReference
stoichiometry: 1.0
species: 231601

231601
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Presqualene diphosphate

211396
type: SpeciesReference
stoichiometry: 1.0
species: 231513

211384
type: SpeciesReference
stoichiometry: 2.0
species: 231674

232919
type: Reaction
product: 202483
product: 202471
product: 202459
reactant: 202447
reactant: 202435
fast: false
reversible: false
name: O-Succinyl-L-homoserine succinate-lyase (adding cysteine)

202483
type: SpeciesReference
stoichiometry: 1.0
species: 232520

202471
type: SpeciesReference
stoichiometry: 1.0
species: 232287

202459
type: SpeciesReference
stoichiometry: 1.0
species: 232215

202447
type: SpeciesReference
stoichiometry: 1.0
species: 232567

202435
type: SpeciesReference
stoichiometry: 1.0
species: 232049

232049
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: O-Succinyl-L-homoserine

231786
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cobalt-precorrin 3

233184
type: Reaction
product: 210180
product: 210168
reactant: 210156
reactant: 210144
fast: false
reversible: false
name: Palmitoyl-CoA:oxygen 2-oxidoreductase

210180
type: SpeciesReference
stoichiometry: 1.0
species: 231914

210168
type: SpeciesReference
stoichiometry: 1.0
species: 231709

231709
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: trans-Hexadec-2-enoyl-CoA

210156
type: SpeciesReference
stoichiometry: 1.0
species: 231538

210144
type: SpeciesReference
stoichiometry: 1.0
species: 232535

232936
type: Reaction
product: 203050
reactant: 203026
reactant: 203014
reversible: true
reactant: 203002
product: 203038
product: 203062
fast: false
name: N-Acetyl-L-glutamate-5-semialdehyde:NADP+ 5-oxidoreductase

203050
type: SpeciesReference
stoichiometry: 1.0
species: 231598

203026
type: SpeciesReference
stoichiometry: 1.0
species: 231597

203014
type: SpeciesReference
stoichiometry: 1.0
species: 231609

203002
type: SpeciesReference
stoichiometry: 1.0
species: 231898

203038
type: SpeciesReference
stoichiometry: 1.0
species: 232536

232536
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: N-Acetyl-L-glutamate 5-phosphate

203062
type: SpeciesReference
stoichiometry: 1.0
species: 232520

233917
type: Reaction
product: 227881
fast: false
reversible: true
name: Exchange: (Magnesium)

227881
type: SpeciesReference
stoichiometry: 1.0
species: 232484

232484
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Magnesium (E)

232271
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: O-Acetyl-L-homoserine

232311
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Adenosine (E)

232651
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: O2.-

233721
type: Reaction
product: 223470
product: 223458
product: 223446
reactant: 223434
reactant: 223422
fast: false
reversible: false
name: ATP:2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine

223470
type: SpeciesReference
stoichiometry: 1.0
species: 232520

223458
type: SpeciesReference
stoichiometry: 1.0
species: 232114

232114
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Amino-7,8-dihydro-4-hydroxy-6-(diphosphooxymethyl)pteridine

223446
type: SpeciesReference
stoichiometry: 1.0
species: 232396

223434
type: SpeciesReference
stoichiometry: 1.0
species: 232222

232222
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine

223422
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233113
type: Reaction
product: 208098
product: 208086
product: 208074
reactant: 208062
reactant: 208050
fast: false
reversible: false
name: GMP:pyrophosphate phosphoribosyltransferase

208098
type: SpeciesReference
stoichiometry: 1.0
species: 232520

208086
type: SpeciesReference
stoichiometry: 1.0
species: 231513

208074
type: SpeciesReference
stoichiometry: 1.0
species: 232476

208062
type: SpeciesReference
stoichiometry: 1.0
species: 231310

208050
type: SpeciesReference
stoichiometry: 1.0
species: 231390

231390
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Guanine

232444
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (R)-2,3-Dihydroxy-3-methylpentanoate

232107
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Prolyl-tRNA(Pro)

231754
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cobalt-precorrin 5

234024
type: Reaction
product: 230438
product: 230426
reactant: 230414
reactant: 230402
fast: false
reversible: true
name: Symport: (Succinate:H+)

230438
type: SpeciesReference
stoichiometry: 1.0
species: 232520

230426
type: SpeciesReference
stoichiometry: 1.0
species: 232287

230414
type: SpeciesReference
stoichiometry: 1.0
species: 232166

230402
type: SpeciesReference
stoichiometry: 1.0
species: 231993

233901
type: Reaction
product: 227592
product: 227580
product: 227568
reactant: 227556
reactant: 227544
fast: false
reversible: true
name: 2,3,4,5-Tetrahydrodipicolinate:NAD+ oxidoreductase

227592
type: SpeciesReference
stoichiometry: 1.0
species: 232520

227580
type: SpeciesReference
stoichiometry: 1.0
species: 231589

227568
type: SpeciesReference
stoichiometry: 1.0
species: 231954

231954
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-2,3-Dihydrodipicolinate

227556
type: SpeciesReference
stoichiometry: 1.0
species: 231593

227544
type: SpeciesReference
stoichiometry: 1.0
species: 231342

233209
type: Reaction
product: 210924
product: 210912
reactant: 210900
reactant: 210888
fast: false
reversible: true
name: Symport: (L-Threonine:H+)

210924
type: SpeciesReference
stoichiometry: 1.0
species: 232520

210912
type: SpeciesReference
stoichiometry: 1.0
species: 232255

210900
type: SpeciesReference
stoichiometry: 1.0
species: 232166

210888
type: SpeciesReference
stoichiometry: 1.0
species: 231998

233392
type: Reaction
product: 215650
fast: false
reversible: true
name: Exchange: (L-Csyteine)

215650
type: SpeciesReference
stoichiometry: 1.0
species: 232069

232069
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Cysteine (E)

232791
type: Reaction
product: 198760
product: 198748
reactant: 198736
reactant: 198724
fast: false
reversible: false
name: Cytidine aminohydrolase

198760
type: SpeciesReference
stoichiometry: 1.0
species: 231545

198748
type: SpeciesReference
stoichiometry: 1.0
species: 232544

198736
type: SpeciesReference
stoichiometry: 1.0
species: 231570

198724
type: SpeciesReference
stoichiometry: 1.0
species: 231965

231965
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cytidine

233645
type: Reaction
product: 221590
product: 221578
product: 221566
reactant: 221553
reactant: 221541
fast: false
reversible: false
name: ATP:D-ribose 5-phosphotransferase

221590
type: SpeciesReference
stoichiometry: 1.0
species: 232520

221578
type: SpeciesReference
stoichiometry: 1.0
species: 231314

221566
type: SpeciesReference
stoichiometry: 1.0
species: 231605

221553
type: SpeciesReference
stoichiometry: 1.0
species: 231494

231494
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Ribose

221541
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232247
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Lysine

233164
type: Reaction
product: 209599
product: 209586
product: 209574
reactant: 209562
reactant: 209550
fast: false
reversible: true
name: (2S,3S)-3-Hydroxy-2-methylbutanoyl-CoA:NAD+ oxidoreductase

209599
type: SpeciesReference
stoichiometry: 1.0
species: 232520

209586
type: SpeciesReference
stoichiometry: 1.0
species: 231589

209574
type: SpeciesReference
stoichiometry: 1.0
species: 231953

231953
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Methylacetoacetyl-CoA

209562
type: SpeciesReference
stoichiometry: 1.0
species: 231593

209550
type: SpeciesReference
stoichiometry: 1.0
species: 231594

231594
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (2S,3S)-3-Hydroxy-2-methylbutanoyl-CoA

232167
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Photon

231477
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (R)-Lactaldehyde

234217
type: Reaction
product: 236422
name: Acetate:CoA ligase (AMP-forming)
reversible: false
product: 236385
product: 236397
reactant: 236373
product: 236409
reactant: 236349
reactant: 236361
fast: false

236422
type: SpeciesReference
stoichiometry: 1.0
species: 232520

236385
type: SpeciesReference
stoichiometry: 1.0
species: 232396

236397
type: SpeciesReference
stoichiometry: 1.0
species: 231513

236373
type: SpeciesReference
stoichiometry: 1.0
species: 231517

236409
type: SpeciesReference
stoichiometry: 1.0
species: 232407

236349
type: SpeciesReference
stoichiometry: 1.0
species: 231573

236361
type: SpeciesReference
stoichiometry: 1.0
species: 232463

232762
type: Reaction
product: 197998
product: 197986
reactant: 197974
fast: false
reversible: false
name: Citrate oxaloacetate-lyase ((pro-3S)-CH2COO- -->acetate)

197998
type: SpeciesReference
stoichiometry: 1.0
species: 232419

232419
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Oxaloacetate

197986
type: SpeciesReference
stoichiometry: 1.0
species: 232463

197974
type: SpeciesReference
stoichiometry: 1.0
species: 232571

232571
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Citrate

232251
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Sirohydrochlorin

231481
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 6-Pyruvoyltetrahydropterin

231521
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5'-Phosphoribosylglycinamide

234201
type: Reaction
product: 235948
product: 235936
reactant: 235923
reactant: 235911
fast: false
reversible: true
name: Superoxide:superoxide oxidoreductase

235948
type: SpeciesReference
stoichiometry: 1.0
species: 231606

235936
type: SpeciesReference
stoichiometry: 1.0
species: 232368

232368
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: H2O2

235923
type: SpeciesReference
stoichiometry: 2.0
species: 232520

235911
type: SpeciesReference
stoichiometry: 2.0
species: 232651

232771
type: Reaction
product: 198204
product: 198192
product: 198179
reactant: 198167
reactant: 198155
fast: false
reversible: false
name: L-Glutamine:D-fructose-6-phosphate aminotransferase (hexose

198204
type: SpeciesReference
stoichiometry: 1.0
species: 232520

198192
type: SpeciesReference
stoichiometry: 1.0
species: 231878

198179
type: SpeciesReference
stoichiometry: 1.0
species: 232372

198167
type: SpeciesReference
stoichiometry: 1.0
species: 232504

232504
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Fructose 6-phosphate

198155
type: SpeciesReference
stoichiometry: 1.0
species: 232612

232348
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 6-Hydroxymelatonin

232875
type: Reaction
reactant: 200972
product: 201020
reversible: true
product: 201032
name: Phenylacetaldehyde:NAD+ oxidoreductase
reactant: 200984
product: 201008
reactant: 200996
fast: false

200972
type: SpeciesReference
stoichiometry: 1.0
species: 231530

231530
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Phenylacetaldehyde

201020
type: SpeciesReference
stoichiometry: 1.0
species: 231589

201032
type: SpeciesReference
stoichiometry: 2.0
species: 232520

200984
type: SpeciesReference
stoichiometry: 1.0
species: 231593

201008
type: SpeciesReference
stoichiometry: 1.0
species: 231385

231385
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Phenylacetic acid

200996
type: SpeciesReference
stoichiometry: 1.0
species: 231570

231578
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Glutamyl-tRNA(Gln)

231602
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Prephytoene diphosphate

231654
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate

233308
type: Reaction
product: 213514
product: 213502
reactant: 213490
fast: false
reversible: false
name: Phsophatidyl-L-serine carboxy-lyase

213514
type: SpeciesReference
stoichiometry: 1.0
species: 231518

213502
type: SpeciesReference
stoichiometry: 1.0
species: 231889

231889
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Phosphatidylethanolamine

213490
type: SpeciesReference
stoichiometry: 1.0
species: 232424

232424
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Phosphatidylserine

231321
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (3S)-3-Hydroxyacyl-CoA

233313
type: Reaction
reversible: false
product: 213683
fast: false
reactant: 213623
reactant: 213611
name: ABC-T: (Cobalt)
product: 213671
product: 213647
reactant: 213635
product: 213659

213683
type: SpeciesReference
stoichiometry: 1.0
species: 232520

213623
type: SpeciesReference
stoichiometry: 1.0
species: 231573

213611
type: SpeciesReference
stoichiometry: 1.0
species: 231858

231858
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Cobalt (E)

213671
type: SpeciesReference
stoichiometry: 1.0
species: 231609

213647
type: SpeciesReference
stoichiometry: 1.0
species: 232652

232652
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cobalt

213635
type: SpeciesReference
stoichiometry: 1.0
species: 231570

213659
type: SpeciesReference
stoichiometry: 1.0
species: 231605

232742
type: Reaction
product: 197408
product: 197396
reactant: 197384
reactant: 197372
fast: false
reversible: true
name: 2.1.1.133

197408
type: SpeciesReference
stoichiometry: 1.0
species: 232412

197396
type: SpeciesReference
stoichiometry: 1.0
species: 231754

197384
type: SpeciesReference
stoichiometry: 1.0
species: 231549

197372
type: SpeciesReference
stoichiometry: 1.0
species: 231753

231753
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cobalt-precorrin 4

233241
type: Reaction
product: 211796
product: 211784
reactant: 211772
reactant: 211760
fast: false
reversible: true
name: Symport: (L-Isoleucine:H+)

211796
type: SpeciesReference
stoichiometry: 1.0
species: 232520

211784
type: SpeciesReference
stoichiometry: 1.0
species: 231506

231506
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Isoleucine

211772
type: SpeciesReference
stoichiometry: 1.0
species: 232166

211760
type: SpeciesReference
stoichiometry: 1.0
species: 232282

231582
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Aspartyl-tRNA(Asn)

232763
type: Reaction
product: 198034
product: 198022
reactant: 198010
fast: false
reversible: false
name: LeuC/D

198034
type: SpeciesReference
stoichiometry: 1.0
species: 231570

198022
type: SpeciesReference
stoichiometry: 1.0
species: 232487

232487
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Methylmaleate

198010
type: SpeciesReference
stoichiometry: 1.0
species: 232572

232572
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (R)-2-Methylmalate

231622
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Formamidopyrimidine nucleoside triphosphate

233744
type: Reaction
product: 223905
product: 223893
reactant: 223881
reactant: 223869
fast: false
reversible: true
name: meso-2,6-Diaminoheptanedioate carboxy-lyase

223905
type: SpeciesReference
stoichiometry: 1.0
species: 231518

223893
type: SpeciesReference
stoichiometry: 1.0
species: 232247

223881
type: SpeciesReference
stoichiometry: 1.0
species: 232520

223869
type: SpeciesReference
stoichiometry: 1.0
species: 231850

234041
type: Reaction
product: 230901
product: 230889
reactant: 230877
reactant: 230865
fast: false
reversible: false
name: Thymidylate 5'-phosphohydrolase

230901
type: SpeciesReference
stoichiometry: 1.0
species: 231609

230889
type: SpeciesReference
stoichiometry: 1.0
species: 231505

231505
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Thymidine

230877
type: SpeciesReference
stoichiometry: 1.0
species: 231570

230865
type: SpeciesReference
stoichiometry: 1.0
species: 231946

231946
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dTMP

232848
type: Reaction
product: 200339
product: 200327
reactant: 200315
reactant: 200303
fast: false
reversible: true
name: 2.7.7.32

200339
type: SpeciesReference
stoichiometry: 1.0
species: 232635

232635
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dTDPgalactose

200327
type: SpeciesReference
stoichiometry: 1.0
species: 231513

200315
type: SpeciesReference
stoichiometry: 1.0
species: 231670

231670
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: alpha-D-Galactose 1-phosphate

200303
type: SpeciesReference
stoichiometry: 1.0
species: 231725

232700
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Asp)

231930
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dGDP

232715
type: Reaction
product: 196649
product: 196637
reactant: 196625
reactant: 196613
fast: false
reversible: false
name: 2.4.2.4

196649
type: SpeciesReference
stoichiometry: 1.0
species: 231994

231994
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Deoxy-D-ribose 1-phosphate

196637
type: SpeciesReference
stoichiometry: 1.0
species: 232600

196625
type: SpeciesReference
stoichiometry: 1.0
species: 231609

196613
type: SpeciesReference
stoichiometry: 1.0
species: 232294

232294
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Deoxyinosine

232952
type: Reaction
product: 203495
product: 203483
product: 203471
reactant: 203459
reactant: 203447
fast: false
reversible: true
name: (S)-Malate:NADP+ oxidoreductase

203495
type: SpeciesReference
stoichiometry: 1.0
species: 232520

203483
type: SpeciesReference
stoichiometry: 1.0
species: 231589

203471
type: SpeciesReference
stoichiometry: 1.0
species: 232419

203459
type: SpeciesReference
stoichiometry: 1.0
species: 231593

203447
type: SpeciesReference
stoichiometry: 1.0
species: 232515

233089
type: Reaction
product: 207045
product: 207033
product: 207021
reactant: 207009
reactant: 206997
fast: false
reversible: true
name: (R)-2,3-Dihydroxy-3-methylbutanoate:NADP+ oxidoreductase

207045
type: SpeciesReference
stoichiometry: 1.0
species: 232520

207033
type: SpeciesReference
stoichiometry: 1.0
species: 231586

207021
type: SpeciesReference
stoichiometry: 1.0
species: 231598

207009
type: SpeciesReference
stoichiometry: 1.0
species: 231597

206997
type: SpeciesReference
stoichiometry: 1.0
species: 232330

232330
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (R)-2,3-Dihydroxy-3-methylbutanoate

233588
type: Reaction
product: 220050
product: 220038
reactant: 220026
reactant: 220014
fast: false
reversible: true
name: 4.1.1.37

220050
type: SpeciesReference
stoichiometry: 4.0
species: 231518

220038
type: SpeciesReference
stoichiometry: 1.0
species: 231317

220026
type: SpeciesReference
stoichiometry: 4.0
species: 232520

220014
type: SpeciesReference
stoichiometry: 1.0
species: 232158

232075
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Tetrahydrofolyl-[Glu](2)

233145
type: Reaction
product: 209102
product: 209090
reactant: 209078
reactant: 209066
reactant: 209054
fast: false
reversible: true
name: L-Proline:NAD+ 5-oxidoreductase

209102
type: SpeciesReference
stoichiometry: 1.0
species: 231593

209090
type: SpeciesReference
stoichiometry: 1.0
species: 232512

232512
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Proline

209078
type: SpeciesReference
stoichiometry: 2.0
species: 232520

209066
type: SpeciesReference
stoichiometry: 1.0
species: 231589

209054
type: SpeciesReference
stoichiometry: 1.0
species: 231757

231757
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-1-Pyrroline-5-carboxylate

232115
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: N-Carbamoylsarcosine

233717
type: Reaction
product: 223362
product: 223350
reactant: 223338
reactant: 223326
fast: false
reversible: true
name: Succinate:(acceptor) oxidoreductase

223362
type: SpeciesReference
stoichiometry: 1.0
species: 231914

223350
type: SpeciesReference
stoichiometry: 1.0
species: 231501

231501
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Fumarate

223338
type: SpeciesReference
stoichiometry: 1.0
species: 231538

223326
type: SpeciesReference
stoichiometry: 1.0
species: 232287

233940
type: Reaction
product: 228279
fast: false
reversible: true
name: Exchange: (L-Citrulline)

228279
type: SpeciesReference
stoichiometry: 1.0
species: 232380

233741
type: Reaction
product: 223856
product: 223844
reactant: 223832
fast: false
reversible: true
name: 2-Isopropylmalate hydro-lyase

223856
type: SpeciesReference
stoichiometry: 1.0
species: 231570

223844
type: SpeciesReference
stoichiometry: 1.0
species: 232656

232656
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Isopropylmaleate

223832
type: SpeciesReference
stoichiometry: 1.0
species: 232499

231478
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Triphosphate

233597
type: Reaction
product: 220352
reactant: 220304
fast: false
product: 220364
name: 5-Phosphoribosylamine:pyrophosphate phosphoribosyltransferase
reversible: false
reactant: 220328
reactant: 220316
product: 220340
product: 220376

220352
type: SpeciesReference
stoichiometry: 1.0
species: 231513

220304
type: SpeciesReference
stoichiometry: 1.0
species: 232612

220364
type: SpeciesReference
stoichiometry: 1.0
species: 232372

220328
type: SpeciesReference
stoichiometry: 1.0
species: 231570

220316
type: SpeciesReference
stoichiometry: 1.0
species: 231310

220340
type: SpeciesReference
stoichiometry: 1.0
species: 232580

232580
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5-Phosphoribosylamine

220376
type: SpeciesReference
stoichiometry: 2.0
species: 232520

233213
type: Reaction
name: L-1-Pyrroline-5-carboxylate:NAD+ oxidoreductase
reversible: false
reactant: 210984
product: 211046
product: 211033
reactant: 211008
product: 211020
fast: false
reactant: 210996

210984
type: SpeciesReference
stoichiometry: 1.0
species: 231757

211046
type: SpeciesReference
stoichiometry: 1.0
species: 232520

211033
type: SpeciesReference
stoichiometry: 1.0
species: 231598

211008
type: SpeciesReference
stoichiometry: 2.0
species: 231570

211020
type: SpeciesReference
stoichiometry: 1.0
species: 232372

210996
type: SpeciesReference
stoichiometry: 1.0
species: 231597

233340
type: Reaction
reactant: 214372
reactant: 214384
product: 214444
reactant: 214396
fast: false
product: 214408
name: O-Succinylbenzoate:CoA ligase (AMP-forming)
product: 214432
reversible: false
product: 214420

214372
type: SpeciesReference
stoichiometry: 1.0
species: 231573

214384
type: SpeciesReference
stoichiometry: 1.0
species: 232464

232464
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Succinylbenzoate

214444
type: SpeciesReference
stoichiometry: 1.0
species: 232520

214396
type: SpeciesReference
stoichiometry: 1.0
species: 231517

214408
type: SpeciesReference
stoichiometry: 1.0
species: 232396

214432
type: SpeciesReference
stoichiometry: 1.0
species: 231526

231526
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Succinylbenzoyl-CoA

214420
type: SpeciesReference
stoichiometry: 1.0
species: 231513

232423
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Zinc

233677
type: Reaction
product: 222482
product: 222470
reactant: 222458
reactant: 222446
fast: false
reversible: false
name: 2',3'-Cyclic AMP 3'-nucleotidohydrolase

222482
type: SpeciesReference
stoichiometry: 1.0
species: 232520

222470
type: SpeciesReference
stoichiometry: 1.0
species: 231806

231806
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3'-AMP

222458
type: SpeciesReference
stoichiometry: 1.0
species: 231570

222446
type: SpeciesReference
stoichiometry: 1.0
species: 232439

232439
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2',3'-Cyclic AMP

231358
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Dipeptide

234169
type: Reaction
product: 235117
reactant: 235105
fast: false
reversible: false
name: pmf leak: (Na+)

235117
type: SpeciesReference
stoichiometry: 1.0
species: 232062

232062
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Sodium (E)

235105
type: SpeciesReference
stoichiometry: 1.0
species: 232155

233293
type: Reaction
product: 213238
product: 213226
reactant: 213214
reactant: 213202
fast: false
reversible: false
name: 1.3.99.1

213238
type: SpeciesReference
stoichiometry: 1.0
species: 231642

213226
type: SpeciesReference
stoichiometry: 1.0
species: 231538

213214
type: SpeciesReference
stoichiometry: 1.0
species: 232547

213202
type: SpeciesReference
stoichiometry: 1.0
species: 231914

233464
type: Reaction
product: 216842
product: 216830
reactant: 216818
reactant: 216806
fast: false
reversible: true
name: Propanoyl-CoA:(acceptor) 2,3-oxidoreductase

216842
type: SpeciesReference
stoichiometry: 1.0
species: 232392

216830
type: SpeciesReference
stoichiometry: 1.0
species: 231914

216818
type: SpeciesReference
stoichiometry: 1.0
species: 231538

216806
type: SpeciesReference
stoichiometry: 1.0
species: 231394

231446
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Dihydropteroate

233069
type: Reaction
name: Nicotinate-nucleotide:pyrophosphate phosphoribosyltransferase
reactant: 206393
product: 206441
reactant: 206381
reversible: false
fast: false
product: 206429
reactant: 206405
product: 206417

206393
type: SpeciesReference
stoichiometry: 1.0
species: 231310

206441
type: SpeciesReference
stoichiometry: 1.0
species: 231518

206381
type: SpeciesReference
stoichiometry: 1.0
species: 232274

232274
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Pyridine-2,3-dicarboxylate

206429
type: SpeciesReference
stoichiometry: 1.0
species: 231513

206405
type: SpeciesReference
stoichiometry: 1.0
species: 232520

206417
type: SpeciesReference
stoichiometry: 1.0
species: 232111

234140
type: Reaction
product: 234438
product: 234426
product: 234413
reactant: 234401
reactant: 234389
fast: false
reversible: true
name: N-Formylkynurenine amidohydrolase

234438
type: SpeciesReference
stoichiometry: 2.0
species: 232520

234426
type: SpeciesReference
stoichiometry: 1.0
species: 231761

231761
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Kynurenine

234413
type: SpeciesReference
stoichiometry: 1.0
species: 232307

234401
type: SpeciesReference
stoichiometry: 1.0
species: 231570

234389
type: SpeciesReference
stoichiometry: 1.0
species: 231641

231641
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Formylkynurenine

234260
type: Reaction
fast: false
reactant: 237484
reactant: 237472
product: 237496
product: 237508
reactant: 237460
product: 237532
product: 237520
reversible: false
name: 6.4.1.4

237484
type: SpeciesReference
stoichiometry: 1.0
species: 232483

232483
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: HCO3-

237472
type: SpeciesReference
stoichiometry: 1.0
species: 231353

237496
type: SpeciesReference
stoichiometry: 1.0
species: 231605

237508
type: SpeciesReference
stoichiometry: 1.0
species: 231609

237460
type: SpeciesReference
stoichiometry: 1.0
species: 231573

237532
type: SpeciesReference
stoichiometry: 1.0
species: 232520

237520
type: SpeciesReference
stoichiometry: 1.0
species: 232001

232001
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Methylglutaconyl-CoA

234036
type: Reaction
reactant: 230681
name: ABC-T: (Manganese)
reactant: 230706
product: 230730
product: 230743
fast: false
reversible: false
product: 230718
reactant: 230694
product: 230755

230681
type: SpeciesReference
stoichiometry: 1.0
species: 231682

230706
type: SpeciesReference
stoichiometry: 1.0
species: 231570

230730
type: SpeciesReference
stoichiometry: 1.0
species: 231605

230743
type: SpeciesReference
stoichiometry: 1.0
species: 231609

230718
type: SpeciesReference
stoichiometry: 1.0
species: 232471

232471
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Manganese

230694
type: SpeciesReference
stoichiometry: 1.0
species: 231573

230755
type: SpeciesReference
stoichiometry: 1.0
species: 232520

233792
type: Reaction
product: 225056
product: 225044
product: 225032
reactant: 225020
reactant: 225008
fast: false
reversible: true
name: 1.16.8.1

225056
type: SpeciesReference
stoichiometry: 1.0
species: 232520

225044
type: SpeciesReference
stoichiometry: 1.0
species: 231593

225032
type: SpeciesReference
stoichiometry: 1.0
species: 231561

225020
type: SpeciesReference
stoichiometry: 1.0
species: 231589

225008
type: SpeciesReference
stoichiometry: 1.0
species: 231566

231566
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cob(II)yrinate a,c diamide

232891
type: Reaction
product: 201516
product: 201504
reactant: 201492
reactant: 201480
fast: false
reversible: false
name: ATP:pantetheine-4'-phosphate adenylyltransferase

201516
type: SpeciesReference
stoichiometry: 1.0
species: 232448

201504
type: SpeciesReference
stoichiometry: 1.0
species: 231513

201492
type: SpeciesReference
stoichiometry: 1.0
species: 232014

232014
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Pantetheine 4'-phosphate

201480
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232524
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Ser)

233456
type: Reaction
product: 216706
fast: false
reversible: true
name: Exchange: (Sulfate)

216706
type: SpeciesReference
stoichiometry: 1.0
species: 231933

231933
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Sulfate (E)

231830
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Guanosine 3'-diphosphate 5'-triphosphate

232839
type: Reaction
product: 200050
product: 200038
product: 200026
reactant: 200014
reactant: 200002
fast: false
reversible: false
name: dATP:pyruvate O2-phosphotransferase

200050
type: SpeciesReference
stoichiometry: 1.0
species: 232520

200038
type: SpeciesReference
stoichiometry: 1.0
species: 232671

200026
type: SpeciesReference
stoichiometry: 1.0
species: 231930

200014
type: SpeciesReference
stoichiometry: 1.0
species: 232411

200002
type: SpeciesReference
stoichiometry: 1.0
species: 232488

232488
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dGTP

232844
type: Reaction
product: 200218
reactant: 200182
product: 200230
reversible: false
product: 200206
product: 200242
fast: false
name: Propanoyl-CoA:carbon-dioxide ligase (ADP-forming)
reactant: 200194
reactant: 200170

200218
type: SpeciesReference
stoichiometry: 1.0
species: 231609

200182
type: SpeciesReference
stoichiometry: 1.0
species: 231394

200230
type: SpeciesReference
stoichiometry: 1.0
species: 231861

231861
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-2-Methyl-3-oxopropanoyl-CoA

200206
type: SpeciesReference
stoichiometry: 1.0
species: 231605

200242
type: SpeciesReference
stoichiometry: 1.0
species: 232520

200194
type: SpeciesReference
stoichiometry: 1.0
species: 232483

200170
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233549
type: Reaction
product: 219031
product: 219019
reactant: 219007
reactant: 218995
fast: false
reversible: false
name: L-Aspartate 1-carboxy-lyase

219031
type: SpeciesReference
stoichiometry: 1.0
species: 231518

219019
type: SpeciesReference
stoichiometry: 1.0
species: 232560

232560
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: beta-Alanine

219007
type: SpeciesReference
stoichiometry: 1.0
species: 232520

218995
type: SpeciesReference
stoichiometry: 1.0
species: 232243

234097
type: Reaction
product: 232646
reactant: 232621
reactant: 232609
name: N-Carbamoylsarcosine amidohydrolase
reactant: 232634
reversible: false
fast: false
product: 232658
product: 232670

232646
type: SpeciesReference
stoichiometry: 1.0
species: 231510

231510
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Sarcosine

232621
type: SpeciesReference
stoichiometry: 1.0
species: 231570

232609
type: SpeciesReference
stoichiometry: 1.0
species: 232115

232634
type: SpeciesReference
stoichiometry: 1.0
species: 232520

232658
type: SpeciesReference
stoichiometry: 1.0
species: 231518

232670
type: SpeciesReference
stoichiometry: 1.0
species: 231545

232706
type: Reaction
product: 196374
product: 196362
product: 196350
reactant: 196338
reactant: 196326
fast: false
reversible: false
name: 2.4.1.15

196374
type: SpeciesReference
stoichiometry: 1.0
species: 232520

196362
type: SpeciesReference
stoichiometry: 1.0
species: 231802

231802
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: alpha,alpha'-Trehalose 6-phosphate

196350
type: SpeciesReference
stoichiometry: 1.0
species: 231542

196338
type: SpeciesReference
stoichiometry: 1.0
species: 231917

196326
type: SpeciesReference
stoichiometry: 1.0
species: 232384

232384
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: UDPglucose

232711
type: Reaction
product: 196499
reactant: 196486
fast: false
reversible: true
name: alpha-D-Glucose 6-phosphate ketol-isomerase

196499
type: SpeciesReference
stoichiometry: 1.0
species: 232504

196486
type: SpeciesReference
stoichiometry: 1.0
species: 231917

233708
type: Reaction
product: 223134
product: 223122
product: 223110
reactant: 223098
reactant: 223086
fast: false
reversible: true
name: 3-Isopropylmalate:NAD+ oxidoreductase

223134
type: SpeciesReference
stoichiometry: 1.0
species: 232520

223122
type: SpeciesReference
stoichiometry: 1.0
species: 231589

223110
type: SpeciesReference
stoichiometry: 1.0
species: 232552

232552
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Carboxy-4-methyl-2-oxopentanoate

223098
type: SpeciesReference
stoichiometry: 1.0
species: 231593

223086
type: SpeciesReference
stoichiometry: 1.0
species: 231514

231514
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Isopropylmalate

233273
type: Reaction
product: 212676
product: 212664
product: 212652
reactant: 212640
reactant: 212628
fast: false
reversible: false
name: CDPdiacylglycerol:L-serine 3-O-phosphatidyltransferase

212676
type: SpeciesReference
stoichiometry: 1.0
species: 232520

212664
type: SpeciesReference
stoichiometry: 1.0
species: 232424

212652
type: SpeciesReference
stoichiometry: 1.0
species: 232351

232351
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: CMP

212640
type: SpeciesReference
stoichiometry: 1.0
species: 232624

212628
type: SpeciesReference
stoichiometry: 1.0
species: 232611

232611
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: CDPdiacylglycerol

232360
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: alpha,alpha-Trehalose

231590
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: UDP-D-galacturonate

234120
type: Reaction
product: 233550
product: 233538
reactant: 233526
reactant: 233514
fast: false
reversible: true
name: Symport: (Thymine:H+)

233550
type: SpeciesReference
stoichiometry: 1.0
species: 232520

233538
type: SpeciesReference
stoichiometry: 1.0
species: 232659

233526
type: SpeciesReference
stoichiometry: 1.0
species: 232166

233514
type: SpeciesReference
stoichiometry: 1.0
species: 231798

231798
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Thymine (E)

234092
type: Reaction
product: 232354
product: 232341
reactant: 232329
reactant: 232317
fast: false
reversible: true
name: ATP:AMP phosphotransferase

232354
type: SpeciesReference
stoichiometry: 1.0
species: 231565

232341
type: SpeciesReference
stoichiometry: 1.0
species: 231605

232329
type: SpeciesReference
stoichiometry: 1.0
species: 231937

232317
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233288
type: Reaction
product: 213082
product: 213070
reactant: 213058
reactant: 213046
fast: false
reversible: false
name: Adenosine 3',5'-bisphosphate 3'(2')-phosphohydrolase

213082
type: SpeciesReference
stoichiometry: 1.0
species: 231609

213070
type: SpeciesReference
stoichiometry: 1.0
species: 232396

213058
type: SpeciesReference
stoichiometry: 1.0
species: 231570

213046
type: SpeciesReference
stoichiometry: 1.0
species: 232355

232355
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Adenosine 3',5'-bisphosphate

233764
type: Reaction
product: 224410
product: 224398
product: 224386
reactant: 224374
fast: false
reversible: false
name: L-Ornithine ammonia-lyase(cyclizing)

224410
type: SpeciesReference
stoichiometry: 1.0
species: 232520

224398
type: SpeciesReference
stoichiometry: 1.0
species: 231545

224386
type: SpeciesReference
stoichiometry: 1.0
species: 232512

224374
type: SpeciesReference
stoichiometry: 1.0
species: 232676

233052
type: Reaction
product: 205860
product: 205848
reactant: 205836
reactant: 205824
fast: false
reversible: true
name: Lauroyl-CoA:acetyl-CoA C-acyltransferase

205860
type: SpeciesReference
stoichiometry: 1.0
species: 232146

205848
type: SpeciesReference
stoichiometry: 1.0
species: 231517

205836
type: SpeciesReference
stoichiometry: 1.0
species: 232407

205824
type: SpeciesReference
stoichiometry: 1.0
species: 232226

232226
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Lauroyl-CoA

233888
type: Reaction
product: 227290
product: 227278
reactant: 227266
fast: false
reversible: true
name: Citrate hydro-lyase

227290
type: SpeciesReference
stoichiometry: 1.0
species: 231570

227278
type: SpeciesReference
stoichiometry: 1.0
species: 231585

231585
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: cis-Aconitate

227266
type: SpeciesReference
stoichiometry: 1.0
species: 232571

231637
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate

232984
type: Reaction
product: 204147
fast: false
reversible: true
name: Exchange: (Uracil)

204147
type: SpeciesReference
stoichiometry: 1.0
species: 231646

231646
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Uracil (E)

231977
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3',5'-Cyclic AMP

233417
type: Reaction
product: 216012
fast: false
reversible: true
name: Exchange: (L-Threonine)

216012
type: SpeciesReference
stoichiometry: 1.0
species: 231998

233904
type: Reaction
product: 227652
product: 227640
product: 227628
reactant: 227616
reactant: 227604
fast: false
reversible: true
name: ATP:D-glucose 6-phosphotransferase

227652
type: SpeciesReference
stoichiometry: 1.0
species: 232520

227640
type: SpeciesReference
stoichiometry: 1.0
species: 232664

232664
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Mannose 6-phosphate

227628
type: SpeciesReference
stoichiometry: 1.0
species: 231605

227616
type: SpeciesReference
stoichiometry: 1.0
species: 232575

232575
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Mannose

227604
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232810
type: Reaction
product: 199242
product: 199230
reactant: 199218
reactant: 199206
fast: false
reversible: true
name: 2.5.1.61

199242
type: SpeciesReference
stoichiometry: 4.0
species: 231545

199230
type: SpeciesReference
stoichiometry: 1.0
species: 232061

232061
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Hydroxymethylbilane

199218
type: SpeciesReference
stoichiometry: 1.0
species: 231570

199206
type: SpeciesReference
stoichiometry: 4.0
species: 231497

231945
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dUMP

232758
type: Reaction
product: 197902
product: 197890
reactant: 197878
reactant: 197866
fast: false
reversible: false
name: L-Alanine:glyoxylate aminotransferase

197902
type: SpeciesReference
stoichiometry: 1.0
species: 232420

197890
type: SpeciesReference
stoichiometry: 1.0
species: 232411

197878
type: SpeciesReference
stoichiometry: 1.0
species: 232250

197866
type: SpeciesReference
stoichiometry: 1.0
species: 232291

232291
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Alanine

231997
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Deoxy-D-ribose 5-phosphate

233853
type: Reaction
reactant: 226686
reactant: 226673
reactant: 226661
product: 226722
reversible: false
product: 226698
product: 226710
fast: false
name: Acetate:CoA ligase (ADP-forming)

226686
type: SpeciesReference
stoichiometry: 1.0
species: 231517

226673
type: SpeciesReference
stoichiometry: 1.0
species: 232463

226661
type: SpeciesReference
stoichiometry: 1.0
species: 231573

226722
type: SpeciesReference
stoichiometry: 1.0
species: 231609

226698
type: SpeciesReference
stoichiometry: 1.0
species: 231605

226710
type: SpeciesReference
stoichiometry: 1.0
species: 232407

233520
type: Reaction
product: 218164
reactant: 218152
reactant: 218139
fast: false
reversible: false
name: Halorhodopsin: (Cl-)

218164
type: SpeciesReference
stoichiometry: 1.0
species: 231865

231865
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cl-

218152
type: SpeciesReference
stoichiometry: 1.0
species: 232167

218139
type: SpeciesReference
stoichiometry: 1.0
species: 232010

232010
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Cl- (E)

233545
type: Reaction
product: 218923
reactant: 218911
fast: false
reversible: true
name: Nicotinate-nucleotide:dimethylbenzimidazole

218923
type: SpeciesReference
stoichiometry: 1.0
species: 231341

218911
type: SpeciesReference
stoichiometry: 1.0
species: 231694

231694
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Dimethylbenzimidazole

232856
type: Reaction
product: 200556
product: 200544
reactant: 200532
reactant: 200520
fast: false
reversible: false
name: dCTP aminohydrolase

200556
type: SpeciesReference
stoichiometry: 1.0
species: 231545

200544
type: SpeciesReference
stoichiometry: 1.0
species: 231925

231925
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dUTP

200532
type: SpeciesReference
stoichiometry: 1.0
species: 231570

200520
type: SpeciesReference
stoichiometry: 1.0
species: 231729

231729
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dCTP

232957
type: Reaction
product: 203628
fast: false
reversible: true
name: Exchange: (Phosphonate)

203628
type: SpeciesReference
stoichiometry: 1.0
species: 231389

231389
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Phosphonate (E)

233017
type: Reaction
product: 205258
product: 205246
product: 205234
reactant: 205222
reactant: 205210
fast: false
reversible: false
name: Acetyl phosphate phosphohydrolase

205258
type: SpeciesReference
stoichiometry: 1.0
species: 232520

205246
type: SpeciesReference
stoichiometry: 1.0
species: 231609

205234
type: SpeciesReference
stoichiometry: 1.0
species: 232463

205222
type: SpeciesReference
stoichiometry: 1.0
species: 231570

205210
type: SpeciesReference
stoichiometry: 1.0
species: 231462

231462
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Acetyl phosphate

234172
type: Reaction
product: 235177
product: 235165
reactant: 235153
reactant: 235141
reactant: 235129
fast: false
reversible: true
name: NADH:guanosine-5'-phosphate oxidoreductase(deaminating)

235177
type: SpeciesReference
stoichiometry: 1.0
species: 231598

235165
type: SpeciesReference
stoichiometry: 1.0
species: 232476

235153
type: SpeciesReference
stoichiometry: 1.0
species: 231597

235141
type: SpeciesReference
stoichiometry: 1.0
species: 231545

235129
type: SpeciesReference
stoichiometry: 1.0
species: 231438

233360
type: Reaction
product: 214840
product: 214828
reactant: 214816
reactant: 214804
reactant: 214792
fast: false
reversible: true
name: -

214840
type: SpeciesReference
stoichiometry: 3.0
species: 231597

214828
type: SpeciesReference
stoichiometry: 1.0
species: 232326

232326
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Phytyl diphosphate

214816
type: SpeciesReference
stoichiometry: 3.0
species: 232520

214804
type: SpeciesReference
stoichiometry: 3.0
species: 231598

214792
type: SpeciesReference
stoichiometry: 1.0
species: 231877

231877
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Geranylgeranyl diphosphate

233097
type: Reaction
reactant: 207456
reversible: false
reactant: 207468
reactant: 207480
product: 207504
fast: false
reactant: 207492
product: 207517
name: Growth: DNA

207456
type: SpeciesReference
stoichiometry: 3.73
species: 231449

207468
type: SpeciesReference
stoichiometry: 3.73
species: 231725

207480
type: SpeciesReference
stoichiometry: 2.16
species: 231729

207504
type: SpeciesReference
stoichiometry: 11.78
species: 231513

207492
type: SpeciesReference
stoichiometry: 2.16
species: 232488

207517
type: SpeciesReference
stoichiometry: 1.0
species: 232194

232194
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: BM: DNA (OD ml)

233697
type: Reaction
product: 222844
product: 222832
product: 222820
reactant: 222807
reactant: 222795
fast: false
reversible: false
name: 2.5.1.47; 2.5.1.48

222844
type: SpeciesReference
stoichiometry: 1.0
species: 232520

222832
type: SpeciesReference
stoichiometry: 1.0
species: 232463

222820
type: SpeciesReference
stoichiometry: 1.0
species: 231617

231617
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: S-Sulfo-L-cysteine

222807
type: SpeciesReference
stoichiometry: 1.0
species: 231745

222795
type: SpeciesReference
stoichiometry: 1.0
species: 232278

233484
type: Reaction
product: 217196
fast: false
reversible: true
name: Exchange: (Phenylalanine)

217196
type: SpeciesReference
stoichiometry: 1.0
species: 231826

231370
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: UMP

234045
type: Reaction
product: 231010
product: 230998
reactant: 230986
reactant: 230973
fast: false
reversible: false
name: Thymidine:orthophosphate deoxyribosyltransferase

231010
type: SpeciesReference
stoichiometry: 1.0
species: 231994

230998
type: SpeciesReference
stoichiometry: 1.0
species: 232659

230986
type: SpeciesReference
stoichiometry: 1.0
species: 231609

230973
type: SpeciesReference
stoichiometry: 1.0
species: 231505

234204
type: Reaction
product: 235972
reactant: 235960
fast: false
reversible: true
name: (R)-2-Methyl-3-oxopropanoyl-CoA CoA-carbonylmutase

235972
type: SpeciesReference
stoichiometry: 1.0
species: 232568

235960
type: SpeciesReference
stoichiometry: 1.0
species: 232017

232017
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (R)-2-Methyl-3-oxopropanoyl-CoA

233725
type: Reaction
product: 223518
product: 223506
reactant: 223494
fast: false
reversible: true
name: 2-Amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-

223518
type: SpeciesReference
stoichiometry: 1.0
species: 232222

223506
type: SpeciesReference
stoichiometry: 1.0
species: 232603

232603
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Glycolaldehyde

223494
type: SpeciesReference
stoichiometry: 1.0
species: 231966

231502
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Leucine

233516
type: Reaction
fast: false
reactant: 217994
product: 218055
reactant: 217982
product: 218043
product: 218018
name: ABC-T: (Glycerol)
reversible: false
reactant: 218006
product: 218030

217994
type: SpeciesReference
stoichiometry: 1.0
species: 231573

218055
type: SpeciesReference
stoichiometry: 1.0
species: 232520

217982
type: SpeciesReference
stoichiometry: 1.0
species: 231629

231629
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Glycerol (E)

218043
type: SpeciesReference
stoichiometry: 1.0
species: 231609

218018
type: SpeciesReference
stoichiometry: 1.0
species: 231318

218006
type: SpeciesReference
stoichiometry: 1.0
species: 231570

218030
type: SpeciesReference
stoichiometry: 1.0
species: 231605

231417
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dCMP

233141
type: Reaction
product: 208981
reactant: 208969
reactant: 208956
fast: false
reversible: false
name: (S)-3-Hydroxyisobutyryl-CoA hydro-lyase

208981
type: SpeciesReference
stoichiometry: 1.0
species: 232459

208969
type: SpeciesReference
stoichiometry: 1.0
species: 231570

208956
type: SpeciesReference
stoichiometry: 1.0
species: 231382

232615
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: alpha-D-Glucose

231845
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-(Imidazol-4-yl)-2-oxopropyl phosphate

231562
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Glycerol 1-phosphate (E)

234025
type: Reaction
product: 230487
product: 230475
reactant: 230463
reactant: 230451
fast: false
reversible: true
name: Symport: (Guanine:H+)

230487
type: SpeciesReference
stoichiometry: 1.0
species: 232520

230475
type: SpeciesReference
stoichiometry: 1.0
species: 231390

230463
type: SpeciesReference
stoichiometry: 1.0
species: 232166

230451
type: SpeciesReference
stoichiometry: 1.0
species: 232095

233369
type: Reaction
product: 215081
product: 215069
reactant: 215057
reactant: 215045
reactant: 215033
fast: false
reversible: false
name: MJ0400 Homolog reaction

215081
type: SpeciesReference
stoichiometry: 1.0
species: 232206

232206
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Compound I

215069
type: SpeciesReference
stoichiometry: 1.0
species: 232203

232203
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Hydroxypyruvaldehyde 3-P

215057
type: SpeciesReference
stoichiometry: 3.0
species: 232520

215045
type: SpeciesReference
stoichiometry: 1.0
species: 231657

231657
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 6-Deoxy-5-ketofructose 1-phosphate

215033
type: SpeciesReference
stoichiometry: 1.0
species: 231669

233116
type: Reaction
product: 208146
product: 208134
reactant: 208122
reactant: 208110
fast: false
reversible: false
name: Guanosine 5'-monophosphate phosphohydrolase

208146
type: SpeciesReference
stoichiometry: 1.0
species: 231609

208134
type: SpeciesReference
stoichiometry: 1.0
species: 232033

232033
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Guanosine

208122
type: SpeciesReference
stoichiometry: 1.0
species: 231570

208110
type: SpeciesReference
stoichiometry: 1.0
species: 232476

233445
type: Reaction
product: 216559
product: 216547
reactant: 216535
reactant: 216523
fast: false
reversible: false
name: Antiport: (Oxalate:Formate)

216559
type: SpeciesReference
stoichiometry: 1.0
species: 231929

216547
type: SpeciesReference
stoichiometry: 1.0
species: 231577

231577
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Oxalate

216535
type: SpeciesReference
stoichiometry: 1.0
species: 232307

216523
type: SpeciesReference
stoichiometry: 1.0
species: 232242

232242
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Oxalate (E)

231813
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Methylglyoxal

232948
type: Reaction
product: 203387
product: 203375
reactant: 203363
reactant: 203351
fast: false
reversible: true
name: ATP:(d)GMP phosphotransferase

203387
type: SpeciesReference
stoichiometry: 1.0
species: 232467

203375
type: SpeciesReference
stoichiometry: 1.0
species: 231605

203363
type: SpeciesReference
stoichiometry: 1.0
species: 232476

203351
type: SpeciesReference
stoichiometry: 1.0
species: 231573

234017
type: Reaction
product: 230306
reactant: 230294
reactant: 230282
fast: false
reversible: false
name: ThiI

230306
type: SpeciesReference
stoichiometry: 1.0
species: 231890

231890
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Thiamine biosynthesis intermediate 5

230294
type: SpeciesReference
stoichiometry: 1.0
species: 231886

231886
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Thiamine biosynthesis intermediate 4

230282
type: SpeciesReference
stoichiometry: 1.0
species: 231882

231882
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Thiamine biosynthesis intermediate 3

232852
type: Reaction
product: 200460
product: 200448
reactant: 200436
reactant: 200424
fast: false
reversible: true
name: ATP:nucleoside-diphosphate phosphatransferase

200460
type: SpeciesReference
stoichiometry: 1.0
species: 231729

200448
type: SpeciesReference
stoichiometry: 1.0
species: 231605

200436
type: SpeciesReference
stoichiometry: 1.0
species: 232655

232655
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dCDP

200424
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232953
type: Reaction
reactant: 203507
product: 203580
fast: false
product: 203556
reactant: 203520
reactant: 203532
name: Substrate,reduced-flaboprotein:oxygen oxidoreductase
product: 203568
reversible: true
reactant: 203544

203507
type: SpeciesReference
stoichiometry: 1.0
species: 231726

231726
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Melatonin

203580
type: SpeciesReference
stoichiometry: 1.0
species: 231570

203556
type: SpeciesReference
stoichiometry: 1.0
species: 232348

203520
type: SpeciesReference
stoichiometry: 1.0
species: 231525

231525
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Reduced flavoprotein

203532
type: SpeciesReference
stoichiometry: 1.0
species: 231606

203568
type: SpeciesReference
stoichiometry: 1.0
species: 231533

231533
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Oxidized flavoprotein

203544
type: SpeciesReference
stoichiometry: 1.0
species: 232520

233108
type: Reaction
product: 207953
reactant: 207941
reactant: 207929
fast: false
reversible: false
name: Growth: Salts

207953
type: SpeciesReference
stoichiometry: 1.0
species: 232235

232235
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: BM: Salts (OD ml)

207941
type: SpeciesReference
stoichiometry: 2813.36
species: 232041

207929
type: SpeciesReference
stoichiometry: 2813.36
species: 231865

233816
type: Reaction
product: 225755
product: 225767
fast: false
reactant: 225743
reactant: 225731
reactant: 225719
name: 2.4.2.-
reactant: 225707
reversible: true

225755
type: SpeciesReference
stoichiometry: 1.0
species: 232018

232018
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: N-(5'-Phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-D-

225767
type: SpeciesReference
stoichiometry: 1.0
species: 232612

225743
type: SpeciesReference
stoichiometry: 1.0
species: 232520

225731
type: SpeciesReference
stoichiometry: 1.0
species: 231654

225719
type: SpeciesReference
stoichiometry: 1.0
species: 232372

225707
type: SpeciesReference
stoichiometry: 1.0
species: 231630

231630
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide

234192
type: Reaction
product: 235707
product: 235695
reactant: 235683
reactant: 235671
fast: false
reversible: true
name: Oxalosuccinate:NADP+ oxidoreductase (decarboxylating)

235707
type: SpeciesReference
stoichiometry: 1.0
species: 231518

235695
type: SpeciesReference
stoichiometry: 1.0
species: 232375

235683
type: SpeciesReference
stoichiometry: 1.0
species: 232520

235671
type: SpeciesReference
stoichiometry: 1.0
species: 232195

231778
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5-Aminolevulinate

233936
type: Reaction
product: 228207
fast: false
reversible: true
name: Exchange: (Copper)

228207
type: SpeciesReference
stoichiometry: 1.0
species: 231853

231853
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Copper (E)

232779
type: Reaction
product: 198399
product: 198387
reactant: 198375
reactant: 198363
fast: false
reversible: true
name: L-Aspartate:2-oxoglutarate aminotransferase

198399
type: SpeciesReference
stoichiometry: 1.0
species: 232372

198387
type: SpeciesReference
stoichiometry: 1.0
species: 232419

198375
type: SpeciesReference
stoichiometry: 1.0
species: 232375

198363
type: SpeciesReference
stoichiometry: 1.0
species: 232243

232395
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Octanoyl-[acp]

233452
type: Reaction
product: 216644
fast: false
reversible: true
name: Exchange (L-Tryptophan)

216644
type: SpeciesReference
stoichiometry: 1.0
species: 231834

232306
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Sulfopyruvate

233117
type: Reaction
product: 208206
product: 208194
reactant: 208182
reactant: 208170
reactant: 208158
fast: false
reversible: false
name: 5,10-Methylenetetrahydrofolate:3-methyl-2-oxobutanoate

208206
type: SpeciesReference
stoichiometry: 1.0
species: 232356

232356
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Dehydropantoate

208194
type: SpeciesReference
stoichiometry: 1.0
species: 231397

208182
type: SpeciesReference
stoichiometry: 1.0
species: 231570

208170
type: SpeciesReference
stoichiometry: 1.0
species: 232475

208158
type: SpeciesReference
stoichiometry: 1.0
species: 232479

232479
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5,10-Methylenetetrahydrofolate

231749
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Asparagine (E)

233193
type: Reaction
product: 210472
reactant: 210424
reversible: true
product: 210460
product: 210448
name: Chorismate pyruvate-lyase (amino-accepting)
fast: false
product: 210436
reactant: 210412

210472
type: SpeciesReference
stoichiometry: 1.0
species: 232520

210424
type: SpeciesReference
stoichiometry: 1.0
species: 232612

210460
type: SpeciesReference
stoichiometry: 1.0
species: 232372

210448
type: SpeciesReference
stoichiometry: 1.0
species: 232411

210436
type: SpeciesReference
stoichiometry: 1.0
species: 231366

210412
type: SpeciesReference
stoichiometry: 1.0
species: 231337

234141
type: Reaction
product: 234499
product: 234487
product: 234475
reactant: 234462
reactant: 234450
fast: false
reversible: true
name: ATP:2-dehydro-3-deoxy-D-gluconate 6-phosphotransferase

234499
type: SpeciesReference
stoichiometry: 1.0
species: 232520

234487
type: SpeciesReference
stoichiometry: 1.0
species: 231378

231378
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Dehydro-3-deoxy-6-phospho-D-gluconate

234475
type: SpeciesReference
stoichiometry: 1.0
species: 231605

234462
type: SpeciesReference
stoichiometry: 1.0
species: 231558

231558
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Dehydro-3-deoxy-D-gluconate

234450
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233713
type: Reaction
product: 223254
reactant: 223242
fast: false
reversible: true
name: N-(5-Phospho-beta-D-ribosyl)anthranilate ketol-isomerase

223254
type: SpeciesReference
stoichiometry: 1.0
species: 232230

223242
type: SpeciesReference
stoichiometry: 1.0
species: 231365

231365
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: N-(5-Phospho-D-ribosyl)anthranilate

233797
type: Reaction
product: 225188
product: 225176
reactant: 225164
reactant: 225152
fast: false
reversible: true
name: Symport: (Proline:Na+)

225188
type: SpeciesReference
stoichiometry: 1.0
species: 232520

225176
type: SpeciesReference
stoichiometry: 1.0
species: 232512

225164
type: SpeciesReference
stoichiometry: 1.0
species: 232166

225152
type: SpeciesReference
stoichiometry: 1.0
species: 231785

231785
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Proline (E)

233041
type: Reaction
product: 205620
product: 205608
reactant: 205596
reactant: 205584
fast: false
reversible: true
name: 1.2.1.2

205620
type: SpeciesReference
stoichiometry: 1.0
species: 231589

205608
type: SpeciesReference
stoichiometry: 1.0
species: 231518

205596
type: SpeciesReference
stoichiometry: 1.0
species: 231593

205584
type: SpeciesReference
stoichiometry: 1.0
species: 232307

232286
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Phosphoribosyl-AMP

233873
type: Reaction
product: 227085
product: 227073
product: 227061
reactant: 227049
reactant: 227037
fast: false
reversible: true
name: (S)-3-Hydroxydodecanoyl-CoA:NAD+ oxidoreductase

227085
type: SpeciesReference
stoichiometry: 1.0
species: 232520

227073
type: SpeciesReference
stoichiometry: 1.0
species: 231589

227061
type: SpeciesReference
stoichiometry: 1.0
species: 232142

232142
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Oxododecanoyl-CoA

227049
type: SpeciesReference
stoichiometry: 1.0
species: 231593

227037
type: SpeciesReference
stoichiometry: 1.0
species: 232143

232143
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-3-Hydroxydodecanoyl-CoA

233060
type: Reaction
product: 206065
product: 206053
reactant: 206041
reactant: 206029
fast: false
reversible: false
name: ATP:nicotinamide-nucleotide adenylyltransferase

206065
type: SpeciesReference
stoichiometry: 1.0
species: 232583

232583
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Deamino-NAD+

206053
type: SpeciesReference
stoichiometry: 1.0
species: 231513

206041
type: SpeciesReference
stoichiometry: 1.0
species: 232111

206029
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233664
type: Reaction
product: 222096
product: 222084
product: 222072
reactant: 222060
reactant: 222048
fast: false
reversible: true
name: (R)-2,3-Dihydroxy-3-methylpentanoate:NADP+ oxidoreductase

222096
type: SpeciesReference
stoichiometry: 1.0
species: 232520

222084
type: SpeciesReference
stoichiometry: 1.0
species: 231714

222072
type: SpeciesReference
stoichiometry: 1.0
species: 231598

222060
type: SpeciesReference
stoichiometry: 1.0
species: 231597

222048
type: SpeciesReference
stoichiometry: 1.0
species: 232444

233269
type: Reaction
product: 212568
product: 212556
reactant: 212544
reactant: 212531
reactant: 212519
fast: false
reversible: false
name: UMP:pyrophosphate phosphoribosyltransferase

212568
type: SpeciesReference
stoichiometry: 1.0
species: 231310

212556
type: SpeciesReference
stoichiometry: 1.0
species: 231361

212544
type: SpeciesReference
stoichiometry: 1.0
species: 232520

212531
type: SpeciesReference
stoichiometry: 1.0
species: 231513

212519
type: SpeciesReference
stoichiometry: 1.0
species: 231370

234116
type: Reaction
product: 233442
product: 233430
reactant: 233418
reactant: 233406
fast: false
reversible: true
name: Symport: (Cytosine:H+)

233442
type: SpeciesReference
stoichiometry: 1.0
species: 232520

233430
type: SpeciesReference
stoichiometry: 1.0
species: 232030

232030
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cytosine

233418
type: SpeciesReference
stoichiometry: 1.0
species: 232166

233406
type: SpeciesReference
stoichiometry: 1.0
species: 232083

232083
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Cytosine (E)

231430
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (R)-Pantoate

234236
type: Reaction
product: 236857
product: 236845
product: 236833
reactant: 236821
reactant: 236809
fast: false
reversible: false
name: ATP:D-fructose 6-phosphotransferase

236857
type: SpeciesReference
stoichiometry: 1.0
species: 232520

236845
type: SpeciesReference
stoichiometry: 1.0
species: 232504

236833
type: SpeciesReference
stoichiometry: 1.0
species: 231605

236821
type: SpeciesReference
stoichiometry: 1.0
species: 232564

236809
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232766
type: Reaction
product: 198059
reactant: 198046
fast: false
reversible: true
name: (R)-2-Methyl-3-oxopropanoyl-CoA 2-epimerase

198059
type: SpeciesReference
stoichiometry: 1.0
species: 232017

198046
type: SpeciesReference
stoichiometry: 1.0
species: 231861

234008
type: Reaction
product: 230102
product: 230090
reactant: 230078
reactant: 230066
reactant: 230053
fast: false
reversible: true
name: Alt. Shikimate synth. reaction

230102
type: SpeciesReference
stoichiometry: 1.0
species: 232199

232199
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 6-Deoxy-5-ketomannitol-1-phosphate

230090
type: SpeciesReference
stoichiometry: 1.0
species: 231593

230078
type: SpeciesReference
stoichiometry: 1.0
species: 232520

230066
type: SpeciesReference
stoichiometry: 1.0
species: 231589

230053
type: SpeciesReference
stoichiometry: 1.0
species: 231657

233321
type: Reaction
product: 213949
name: ABC-T: (Sulfate)
product: 213925
reactant: 213889
reactant: 213877
reactant: 213901
fast: false
product: 213937
product: 213913
reversible: false

213949
type: SpeciesReference
stoichiometry: 1.0
species: 232520

213925
type: SpeciesReference
stoichiometry: 1.0
species: 231605

213889
type: SpeciesReference
stoichiometry: 1.0
species: 231573

213877
type: SpeciesReference
stoichiometry: 1.0
species: 231933

213901
type: SpeciesReference
stoichiometry: 1.0
species: 231570

213937
type: SpeciesReference
stoichiometry: 1.0
species: 231609

213913
type: SpeciesReference
stoichiometry: 1.0
species: 232310

232310
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Sulfate

233869
type: Reaction
product: 226976
product: 226964
product: 226952
reactant: 226940
reactant: 226928
fast: false
reversible: false
name: 3.6.1.15

226976
type: SpeciesReference
stoichiometry: 1.0
species: 232520

226964
type: SpeciesReference
stoichiometry: 1.0
species: 231609

226952
type: SpeciesReference
stoichiometry: 1.0
species: 232352

226940
type: SpeciesReference
stoichiometry: 1.0
species: 231570

226928
type: SpeciesReference
stoichiometry: 1.0
species: 232623

233812
type: Reaction
product: 225658
reactant: 225646
reactant: 225633
fast: false
reversible: false
name: Halorhodopsin: (Nitrate)

225658
type: SpeciesReference
stoichiometry: 1.0
species: 231393

225646
type: SpeciesReference
stoichiometry: 1.0
species: 232167

225633
type: SpeciesReference
stoichiometry: 1.0
species: 232099

232099
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Nitrate (E)

233276
type: Reaction
product: 212725
product: 212713
reactant: 212700
reactant: 212688
fast: false
reversible: false
name: 2.7.8.5

212725
type: SpeciesReference
stoichiometry: 1.0
species: 232660

232660
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Phosphatidylglycerophosphate

212713
type: SpeciesReference
stoichiometry: 1.0
species: 232351

212700
type: SpeciesReference
stoichiometry: 1.0
species: 231441

231441
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Glycerol 1-phosphate

212688
type: SpeciesReference
stoichiometry: 1.0
species: 232611

233376
type: Reaction
product: 215227
product: 215215
reactant: 215203
reactant: 215191
fast: false
reversible: true
name: Symport: (Guanosine:H+)

215227
type: SpeciesReference
stoichiometry: 1.0
species: 232520

215215
type: SpeciesReference
stoichiometry: 1.0
species: 232033

215203
type: SpeciesReference
stoichiometry: 1.0
species: 232166

215191
type: SpeciesReference
stoichiometry: 1.0
species: 232110

232775
type: Reaction
product: 198314
product: 198302
reactant: 198290
reactant: 198278
fast: false
reversible: true
name: 4.99.1.3

198314
type: SpeciesReference
stoichiometry: 2.0
species: 232520

198302
type: SpeciesReference
stoichiometry: 1.0
species: 231765

198290
type: SpeciesReference
stoichiometry: 1.0
species: 232652

198278
type: SpeciesReference
stoichiometry: 1.0
species: 232251

233393
type: Reaction
fast: false
reactant: 215686
product: 215722
product: 215710
product: 215698
reversible: false
reactant: 215674
name: (S)-Methylmalonate semialdehyde:NAD+ oxidoreductase
reactant: 215662

215686
type: SpeciesReference
stoichiometry: 1.0
species: 231593

215722
type: SpeciesReference
stoichiometry: 1.0
species: 231589

215710
type: SpeciesReference
stoichiometry: 1.0
species: 231518

215698
type: SpeciesReference
stoichiometry: 1.0
species: 231394

215674
type: SpeciesReference
stoichiometry: 1.0
species: 231517

215662
type: SpeciesReference
stoichiometry: 1.0
species: 232455

232455
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-Methylmalonate semialdehyde

233972
type: Reaction
product: 229073
reactant: 229061
fast: false
reversible: false
name: Molybdopterin biosynthesis

229073
type: SpeciesReference
stoichiometry: 1.0
species: 231621

231621
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Molybdopterin

229061
type: SpeciesReference
stoichiometry: 1.0
species: 232223

232223
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cyclic pyranopterin monophosphate

233260
type: Reaction
product: 212229
product: 212217
reactant: 212205
reactant: 212193
fast: false
reversible: false
name: Symport: (L-Arginine:H+)

212229
type: SpeciesReference
stoichiometry: 1.0
species: 232520

212217
type: SpeciesReference
stoichiometry: 1.0
species: 232619

232619
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Arginine

212205
type: SpeciesReference
stoichiometry: 1.0
species: 232166

212193
type: SpeciesReference
stoichiometry: 1.0
species: 231905

231905
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Arginine (E)

232734
type: Reaction
product: 197142
product: 197130
reactant: 197118
reactant: 197106
fast: false
reversible: false
name: 2.3.1.181

197142
type: SpeciesReference
stoichiometry: 1.0
species: 231466

231466
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Acyl-carrier protein

197130
type: SpeciesReference
stoichiometry: 1.0
species: 232171

232171
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Protein N6-(lipoyl)lysine

197118
type: SpeciesReference
stoichiometry: 1.0
species: 232025

197106
type: SpeciesReference
stoichiometry: 1.0
species: 232182

232182
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Lipoyl-[acp]

232234
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Tyr)

233729
type: Reaction
product: 223638
product: 223626
product: 223614
reactant: 223602
reactant: 223590
fast: false
reversible: false
name: 2-Amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)

223638
type: SpeciesReference
stoichiometry: 2.0
species: 232520

223626
type: SpeciesReference
stoichiometry: 3.0
species: 231609

223614
type: SpeciesReference
stoichiometry: 1.0
species: 231966

223602
type: SpeciesReference
stoichiometry: 3.0
species: 231570

223590
type: SpeciesReference
stoichiometry: 1.0
species: 231870

231870
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)

232367
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: UDP-D-galactose

233952
type: Reaction
product: 228497
product: 228485
product: 228473
reactant: 228461
reactant: 228449
fast: false
reversible: false
name: Met Bio Gap

228497
type: SpeciesReference
stoichiometry: 1.0
species: 231909

231909
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5-Methyltetrahydropteroyltri-L-glutamate

228485
type: SpeciesReference
stoichiometry: 1.0
species: 231518

228473
type: SpeciesReference
stoichiometry: 1.0
species: 231545

228461
type: SpeciesReference
stoichiometry: 1.0
species: 232387

232387
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Tetrahydropteroyltri-L-glutamate

228449
type: SpeciesReference
stoichiometry: 1.0
species: 232420

233856
type: Reaction
product: 226771
product: 226759
reactant: 226746
reactant: 226734
fast: false
reversible: false
name: 2.2.1.6

226771
type: SpeciesReference
stoichiometry: 1.0
species: 231518

226759
type: SpeciesReference
stoichiometry: 1.0
species: 232399

226746
type: SpeciesReference
stoichiometry: 1.0
species: 232520

226734
type: SpeciesReference
stoichiometry: 2.0
species: 232411

231677
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Pantothenate (E)

233973
type: Reaction
product: 229121
product: 229109
reactant: 229097
reactant: 229085
fast: false
reversible: false
name: ATP:carbamate phosphotransferase

229121
type: SpeciesReference
stoichiometry: 1.0
species: 232648

229109
type: SpeciesReference
stoichiometry: 1.0
species: 231605

229097
type: SpeciesReference
stoichiometry: 1.0
species: 232131

232131
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Carbamate

229085
type: SpeciesReference
stoichiometry: 1.0
species: 231573

231718
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Fumarate (E)

233840
type: Reaction
product: 226444
product: 226432
reactant: 226420
reactant: 226408
fast: false
reversible: true
name: 6.3.1.10

226444
type: SpeciesReference
stoichiometry: 1.0
species: 231570

226432
type: SpeciesReference
stoichiometry: 1.0
species: 231554

231554
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Adenosyl cobinamide

226420
type: SpeciesReference
stoichiometry: 1.0
species: 232270

232270
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 1-Aminopropan-2-ol

226408
type: SpeciesReference
stoichiometry: 1.0
species: 231569

233745
type: Reaction
reactant: 223929
product: 223953
product: 223965
reversible: false
product: 223977
name: N-Methylimidazolidine-2,4-dione amidohydrolase (ATP-hydrolysing)
fast: false
reactant: 223917
product: 223989
reactant: 223941

223929
type: SpeciesReference
stoichiometry: 1.0
species: 231653

223953
type: SpeciesReference
stoichiometry: 1.0
species: 231605

223965
type: SpeciesReference
stoichiometry: 1.0
species: 231609

223977
type: SpeciesReference
stoichiometry: 1.0
species: 232115

223917
type: SpeciesReference
stoichiometry: 1.0
species: 231573

223989
type: SpeciesReference
stoichiometry: 2.0
species: 232520

223941
type: SpeciesReference
stoichiometry: 2.0
species: 231570

233137
type: Reaction
fast: false
reversible: false
reactant: 208808
name: Oxid Phos: Complex IV
product: 208856
product: 208868
reactant: 208832
reactant: 208820
product: 208844

208808
type: SpeciesReference
stoichiometry: 1.0
species: 231606

208856
type: SpeciesReference
stoichiometry: 4.0
species: 232166

208868
type: SpeciesReference
stoichiometry: 4.0
species: 232214

208832
type: SpeciesReference
stoichiometry: 4.0
species: 232520

208820
type: SpeciesReference
stoichiometry: 4.0
species: 232207

208844
type: SpeciesReference
stoichiometry: 2.0
species: 231570

233612
type: Reaction
product: 220706
product: 220693
reactant: 220680
fast: false
reversible: false
name: (R)-2,3-Dihydroxy-3-methylpentanoate hydro-lyase

220706
type: SpeciesReference
stoichiometry: 1.0
species: 231570

220693
type: SpeciesReference
stoichiometry: 1.0
species: 232451

232451
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (3R)-3-Methyl-2-oxopentanoic acid

220680
type: SpeciesReference
stoichiometry: 1.0
species: 232444

233217
type: Reaction
reactant: 211106
reactant: 211118
product: 211142
fast: false
reversible: false
product: 211130
name: L-1-Pyrroline-5-carboxylate:NAD+ oxidoreductase
product: 211154
reactant: 211094

211106
type: SpeciesReference
stoichiometry: 1.0
species: 231593

211118
type: SpeciesReference
stoichiometry: 2.0
species: 231570

211142
type: SpeciesReference
stoichiometry: 1.0
species: 231589

211130
type: SpeciesReference
stoichiometry: 1.0
species: 232372

211154
type: SpeciesReference
stoichiometry: 1.0
species: 232520

211094
type: SpeciesReference
stoichiometry: 1.0
species: 231757

233824
type: Reaction
product: 225974
product: 225962
reactant: 225950
reactant: 225938
fast: false
reversible: false
name: Symport: (Cl-:H+)

225974
type: SpeciesReference
stoichiometry: 1.0
species: 232520

225962
type: SpeciesReference
stoichiometry: 1.0
species: 231865

225950
type: SpeciesReference
stoichiometry: 1.0
species: 232166

225938
type: SpeciesReference
stoichiometry: 1.0
species: 232010

233925
type: Reaction
product: 228061
product: 228049
reactant: 228037
reactant: 228025
reactant: 228013
fast: false
reversible: false
name: ATP:pyruvate O2-phosphotransferase

228061
type: SpeciesReference
stoichiometry: 1.0
species: 232411

228049
type: SpeciesReference
stoichiometry: 1.0
species: 231573

228037
type: SpeciesReference
stoichiometry: 1.0
species: 232520

228025
type: SpeciesReference
stoichiometry: 1.0
species: 232671

228013
type: SpeciesReference
stoichiometry: 1.0
species: 231605

233004
type: Reaction
product: 204895
fast: false
product: 204882
name: 6.1.1.5
reactant: 204833
reactant: 204846
product: 204870
reactant: 204820
reversible: false
product: 204858

204895
type: SpeciesReference
stoichiometry: 1.0
species: 232520

204882
type: SpeciesReference
stoichiometry: 1.0
species: 231685

231685
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Isoleucyl-tRNA(Ile)

204833
type: SpeciesReference
stoichiometry: 1.0
species: 231506

204846
type: SpeciesReference
stoichiometry: 1.0
species: 232627

204870
type: SpeciesReference
stoichiometry: 1.0
species: 231513

204820
type: SpeciesReference
stoichiometry: 1.0
species: 231573

204858
type: SpeciesReference
stoichiometry: 1.0
species: 232396

233468
type: Reaction
product: 216903
product: 216891
reactant: 216879
reactant: 216867
fast: false
reversible: false
name: (S)-2-Methyl-3-oxopropanoyl-CoA carboxy-lyase

216903
type: SpeciesReference
stoichiometry: 1.0
species: 231518

216891
type: SpeciesReference
stoichiometry: 1.0
species: 231394

216879
type: SpeciesReference
stoichiometry: 1.0
species: 232520

216867
type: SpeciesReference
stoichiometry: 1.0
species: 231861

232548
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Lipoate

233441
type: Reaction
name: ABC-T: (D-Ribose)
product: 216438
reactant: 216414
product: 216462
reactant: 216401
fast: false
reactant: 216388
product: 216450
product: 216426
reversible: false

216438
type: SpeciesReference
stoichiometry: 1.0
species: 231605

216414
type: SpeciesReference
stoichiometry: 1.0
species: 231570

216462
type: SpeciesReference
stoichiometry: 1.0
species: 232520

216401
type: SpeciesReference
stoichiometry: 1.0
species: 231573

216388
type: SpeciesReference
stoichiometry: 1.0
species: 231721

231721
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: D-Ribose (E)

216450
type: SpeciesReference
stoichiometry: 1.0
species: 231609

216426
type: SpeciesReference
stoichiometry: 1.0
species: 231494

233669
type: Reaction
product: 222240
product: 222228
product: 222216
reactant: 222204
reactant: 222192
fast: false
reversible: true
name: L-Arogenate hydro-lyase (decarboxylating)

222240
type: SpeciesReference
stoichiometry: 1.0
species: 231518

222228
type: SpeciesReference
stoichiometry: 1.0
species: 231570

222216
type: SpeciesReference
stoichiometry: 1.0
species: 232683

222204
type: SpeciesReference
stoichiometry: 1.0
species: 232520

222192
type: SpeciesReference
stoichiometry: 1.0
species: 232543

232543
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Arogenate

234013
type: Reaction
product: 230210
reactant: 230198
fast: false
reversible: false
name: ThiF

230210
type: SpeciesReference
stoichiometry: 1.0
species: 231893

230198
type: SpeciesReference
stoichiometry: 1.0
species: 231890

232814
type: Reaction
product: 199350
product: 199338
reactant: 199326
reactant: 199314
fast: false
reversible: true
name: ATP:CMP phosphotransferase

199350
type: SpeciesReference
stoichiometry: 1.0
species: 232655

199338
type: SpeciesReference
stoichiometry: 1.0
species: 231605

199326
type: SpeciesReference
stoichiometry: 1.0
species: 231417

199314
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233188
type: Reaction
product: 210291
product: 210278
product: 210265
reactant: 210253
reactant: 210241
fast: false
reversible: false
name: 2'-Deoxycytidine diphosphate:oxidized-thioredoxin 2'-oxidoreductase

210291
type: SpeciesReference
stoichiometry: 1.0
species: 231570

210278
type: SpeciesReference
stoichiometry: 1.0
species: 231818

210265
type: SpeciesReference
stoichiometry: 1.0
species: 232655

210253
type: SpeciesReference
stoichiometry: 1.0
species: 231350

231350
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: CDP

210241
type: SpeciesReference
stoichiometry: 1.0
species: 231821

233648
type: Reaction
product: 221626
reactant: 221614
reactant: 221602
fast: false
reversible: true
name: (S)-Dihydroorotate amidohydrolase

221626
type: SpeciesReference
stoichiometry: 1.0
species: 231789

221614
type: SpeciesReference
stoichiometry: 1.0
species: 231570

221602
type: SpeciesReference
stoichiometry: 1.0
species: 231797

231658
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: sn-3-O-(Geranylgeranyl)glycerol 1-phosphate

233341
type: Reaction
product: 214504
product: 214492
product: 214480
reactant: 214468
reactant: 214456
fast: false
reversible: false
name: trans,trans-Farnesyl-diphosphate:isopentenyl-diphosphate

214504
type: SpeciesReference
stoichiometry: 1.0
species: 232520

214492
type: SpeciesReference
stoichiometry: 1.0
species: 231877

214480
type: SpeciesReference
stoichiometry: 1.0
species: 231513

214468
type: SpeciesReference
stoichiometry: 1.0
species: 231458

214456
type: SpeciesReference
stoichiometry: 1.0
species: 231674

232823
type: Reaction
product: 199616
product: 199604
reactant: 199592
reactant: 199580
fast: false
reversible: false
name: 5,10-Methylenetetrahydrofolate:dUMP C-methyltransferase

199616
type: SpeciesReference
stoichiometry: 1.0
species: 231946

199604
type: SpeciesReference
stoichiometry: 1.0
species: 231581

199592
type: SpeciesReference
stoichiometry: 1.0
species: 232479

199580
type: SpeciesReference
stoichiometry: 1.0
species: 231945

234225
type: Reaction
product: 236579
product: 236567
reactant: 236555
fast: false
reversible: true
name: Isocitrate hydro-lyase

236579
type: SpeciesReference
stoichiometry: 1.0
species: 231570

236567
type: SpeciesReference
stoichiometry: 1.0
species: 231585

236555
type: SpeciesReference
stoichiometry: 1.0
species: 231734

233197
type: Reaction
product: 210571
reactant: 210558
fast: false
reversible: true
name: D-Glyceraldehyde-3-phosphate ketol-isomerase

210571
type: SpeciesReference
stoichiometry: 1.0
species: 231349

210558
type: SpeciesReference
stoichiometry: 1.0
species: 231313

232795
type: Reaction
product: 198856
product: 198844
reactant: 198832
fast: false
reversible: true
name: 3-Dehydroquinate hydro-lyase

198856
type: SpeciesReference
stoichiometry: 1.0
species: 231570

198844
type: SpeciesReference
stoichiometry: 1.0
species: 232687

232687
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Dehydroshikimate

198832
type: SpeciesReference
stoichiometry: 1.0
species: 232468

232468
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Dehydroquinate

233776
type: Reaction
product: 224699
product: 224687
reactant: 224675
reactant: 224663
fast: false
reversible: false
name: N2-Acetyl-L-ornithine amidohydrolase

224699
type: SpeciesReference
stoichiometry: 1.0
species: 232676

224687
type: SpeciesReference
stoichiometry: 1.0
species: 232463

224675
type: SpeciesReference
stoichiometry: 1.0
species: 231570

224663
type: SpeciesReference
stoichiometry: 1.0
species: 231790

231678
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Magnesium

233064
type: Reaction
fast: false
product: 206211
product: 206187
name: 5'-Phosphoribosylformylglycinamide:L-glutamine amido-ligase
reactant: 206126
product: 206174
product: 206199
product: 206223
reactant: 206150
reversible: false
reactant: 206162
reactant: 206138

206211
type: SpeciesReference
stoichiometry: 1.0
species: 232372

206187
type: SpeciesReference
stoichiometry: 1.0
species: 231609

206126
type: SpeciesReference
stoichiometry: 1.0
species: 231573

206174
type: SpeciesReference
stoichiometry: 1.0
species: 231605

206199
type: SpeciesReference
stoichiometry: 1.0
species: 231386

231386
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine

206223
type: SpeciesReference
stoichiometry: 2.0
species: 232520

206150
type: SpeciesReference
stoichiometry: 1.0
species: 232612

206162
type: SpeciesReference
stoichiometry: 1.0
species: 231570

206138
type: SpeciesReference
stoichiometry: 1.0
species: 231961

231961
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5'-Phosphoribosyl-N-formylglycinamide

233793
type: Reaction
product: 225104
product: 225092
reactant: 225080
reactant: 225068
fast: false
reversible: false
name: Propanoate:CoA ligase (AMP-forming)

225104
type: SpeciesReference
stoichiometry: 1.0
species: 232322

232322
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Propinol adenylate

225092
type: SpeciesReference
stoichiometry: 1.0
species: 231513

225080
type: SpeciesReference
stoichiometry: 1.0
species: 232591

225068
type: SpeciesReference
stoichiometry: 1.0
species: 231573

231926
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Fructose 2,6-bisphosphate

233168
type: Reaction
fast: false
product: 209707
reactant: 209659
product: 209683
product: 209719
name: L-Cystathionine L-homocysteine-lyase (deaminating)
reversible: false
reactant: 209671
product: 209695

209707
type: SpeciesReference
stoichiometry: 1.0
species: 232411

209659
type: SpeciesReference
stoichiometry: 1.0
species: 232215

209683
type: SpeciesReference
stoichiometry: 1.0
species: 232539

209719
type: SpeciesReference
stoichiometry: 1.0
species: 232520

209671
type: SpeciesReference
stoichiometry: 1.0
species: 231570

209695
type: SpeciesReference
stoichiometry: 1.0
species: 231545

233660
type: Reaction
product: 221976
product: 221964
product: 221952
reactant: 221940
reactant: 221928
fast: false
reversible: true
name: ATP:shikimate 3-phosphotransferase

221976
type: SpeciesReference
stoichiometry: 1.0
species: 232520

221964
type: SpeciesReference
stoichiometry: 1.0
species: 231482

231482
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Shikimate 3-phosphate

221952
type: SpeciesReference
stoichiometry: 1.0
species: 231605

221940
type: SpeciesReference
stoichiometry: 1.0
species: 231862

231862
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Shikimate

221928
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233265
type: Reaction
product: 212458
product: 212446
reactant: 212434
reactant: 212422
fast: false
reversible: true
name: Symport: (L-Cysteine:H+)

212458
type: SpeciesReference
stoichiometry: 1.0
species: 232520

212446
type: SpeciesReference
stoichiometry: 1.0
species: 232567

212434
type: SpeciesReference
stoichiometry: 1.0
species: 232166

212422
type: SpeciesReference
stoichiometry: 1.0
species: 232069

233820
type: Reaction
product: 225864
product: 225852
reactant: 225840
fast: false
reversible: true
name: (S)-3-Hydroxydodecanoyl-CoA hydro-lyase

225864
type: SpeciesReference
stoichiometry: 1.0
species: 231570

225852
type: SpeciesReference
stoichiometry: 1.0
species: 231857

231857
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-trans-Dodecenoyl-CoA

225840
type: SpeciesReference
stoichiometry: 1.0
species: 232143

233921
type: Reaction
fast: false
product: 227989
product: 227965
reactant: 227941
reversible: false
product: 227977
reactant: 227953
reactant: 227929
name: Pyruvaldehyde:NAD+ oxidoreductase

227989
type: SpeciesReference
stoichiometry: 2.0
species: 232520

227965
type: SpeciesReference
stoichiometry: 1.0
species: 232411

227941
type: SpeciesReference
stoichiometry: 1.0
species: 231593

227977
type: SpeciesReference
stoichiometry: 1.0
species: 231589

227953
type: SpeciesReference
stoichiometry: 1.0
species: 231570

227929
type: SpeciesReference
stoichiometry: 1.0
species: 231813

234112
type: Reaction
product: 233334
product: 233199
reactant: 233186
reactant: 233147
fast: false
reversible: true
name: ATP:nucleoside-diphosphate phosphatransferase

233334
type: SpeciesReference
stoichiometry: 1.0
species: 231449

233199
type: SpeciesReference
stoichiometry: 1.0
species: 231605

233186
type: SpeciesReference
stoichiometry: 1.0
species: 231565

233147
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233768
type: Reaction
product: 224483
reactant: 224470
fast: false
reversible: true
name: -

224483
type: SpeciesReference
stoichiometry: 1.0
species: 231633

231633
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Threonine O-3-phosphate

224470
type: SpeciesReference
stoichiometry: 1.0
species: 232255

231986
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Thiamin

234232
type: Reaction
product: 236736
product: 236723
reactant: 236711
fast: false
reversible: true
name: 4.2.1.24

236736
type: SpeciesReference
stoichiometry: 2.0
species: 231570

236723
type: SpeciesReference
stoichiometry: 1.0
species: 231497

236711
type: SpeciesReference
stoichiometry: 2.0
species: 231778

233908
type: Reaction
product: 227785
product: 227773
reactant: 227761
reactant: 227749
fast: false
reversible: false
name: Hexanoyl-CoA:(acceptor) 2,3-oxidoreductase

227785
type: SpeciesReference
stoichiometry: 1.0
species: 231914

227773
type: SpeciesReference
stoichiometry: 1.0
species: 231705

231705
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: trans-Hex-2-enoyl-CoA

227761
type: SpeciesReference
stoichiometry: 1.0
species: 231538

227749
type: SpeciesReference
stoichiometry: 1.0
species: 231713

232900
type: Reaction
product: 201914
product: 201890
reversible: false
reactant: 201866
product: 201878
reactant: 201854
product: 201902
fast: false
reactant: 201842
name: 6.1.1.9

201914
type: SpeciesReference
stoichiometry: 1.0
species: 232520

201890
type: SpeciesReference
stoichiometry: 1.0
species: 231513

201866
type: SpeciesReference
stoichiometry: 1.0
species: 232576

201878
type: SpeciesReference
stoichiometry: 1.0
species: 232396

201854
type: SpeciesReference
stoichiometry: 1.0
species: 232254

201902
type: SpeciesReference
stoichiometry: 1.0
species: 232298

232298
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Valyl-tRNA(Val)

201842
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232976
type: Reaction
product: 204027
fast: false
reversible: true
name: Exchange: (Inosine)

204027
type: SpeciesReference
stoichiometry: 1.0
species: 232022

234189
type: Reaction
product: 235659
product: 235647
product: 235635
reactant: 235623
reactant: 235611
fast: false
reversible: false
name: S-Aminomethyldihydrolipoylprotein:(6S)-tetrahydrofolate

235659
type: SpeciesReference
stoichiometry: 1.0
species: 232174

232174
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Dihydrolipoylprotein

235647
type: SpeciesReference
stoichiometry: 1.0
species: 231545

235635
type: SpeciesReference
stoichiometry: 1.0
species: 232479

235623
type: SpeciesReference
stoichiometry: 1.0
species: 231949

231949
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: S-Aminomethyldihydrolipoylprotein

235611
type: SpeciesReference
stoichiometry: 1.0
species: 231397

234088
type: Reaction
product: 232256
fast: false
reversible: true
name: Exchange: (Deoxyguanosine)

232256
type: SpeciesReference
stoichiometry: 1.0
species: 232472

233409
type: Reaction
product: 215904
fast: false
reversible: true
name: Exchange: (Orthophosphate)

215904
type: SpeciesReference
stoichiometry: 1.0
species: 231766

233169
type: Reaction
product: 209756
product: 209769
reactant: 209744
reactant: 209731
name: Cystathionine L-homocysteine-lyase (deaminating)
reversible: false
fast: false
product: 209794
product: 209781

209756
type: SpeciesReference
stoichiometry: 1.0
species: 232539

209769
type: SpeciesReference
stoichiometry: 1.0
species: 231545

209744
type: SpeciesReference
stoichiometry: 1.0
species: 231570

209731
type: SpeciesReference
stoichiometry: 1.0
species: 231822

231822
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cystathionine

209794
type: SpeciesReference
stoichiometry: 1.0
species: 232520

209781
type: SpeciesReference
stoichiometry: 1.0
species: 232411

233372
type: Reaction
product: 215129
product: 215117
reactant: 215105
reactant: 215093
fast: false
reversible: true
name: Symport: (Thymidine:H+)

215129
type: SpeciesReference
stoichiometry: 1.0
species: 232520

215117
type: SpeciesReference
stoichiometry: 1.0
species: 231505

215105
type: SpeciesReference
stoichiometry: 1.0
species: 232166

215093
type: SpeciesReference
stoichiometry: 1.0
species: 232319

232319
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Thymidine (E)

233036
type: Reaction
product: 205547
fast: false
reversible: true
name: Exchange: (Betaine)

205547
type: SpeciesReference
stoichiometry: 1.0
species: 232006

233845
type: Reaction
product: 226528
fast: false
reversible: true
name: Exchange: (Photon)

226528
type: SpeciesReference
stoichiometry: 1.0
species: 232167

232480
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-1-Aminopropan-2-ol O-phosphate

234072
type: Reaction
product: 232064
product: 232052
product: 232040
reactant: 232028
reactant: 232016
fast: false
reversible: false
name: 2.1.1.-

232064
type: SpeciesReference
stoichiometry: 1.0
species: 232520

232052
type: SpeciesReference
stoichiometry: 1.0
species: 232412

232040
type: SpeciesReference
stoichiometry: 1.0
species: 232547

232028
type: SpeciesReference
stoichiometry: 1.0
species: 231549

232016
type: SpeciesReference
stoichiometry: 1.0
species: 231638

231638
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Demethylmenaquinone

233632
type: Reaction
product: 221251
product: 221239
reactant: 221227
reactant: 221215
fast: false
reversible: true
name: 2.4.2.4

221251
type: SpeciesReference
stoichiometry: 1.0
species: 231994

221239
type: SpeciesReference
stoichiometry: 1.0
species: 231390

221227
type: SpeciesReference
stoichiometry: 1.0
species: 231609

221215
type: SpeciesReference
stoichiometry: 1.0
species: 231777

233364
type: Reaction
reversible: true
product: 214913
reactant: 214864
reactant: 214876
reactant: 214888
product: 214937
product: 214901
fast: false
product: 214925
name: 6.3.2.17

214913
type: SpeciesReference
stoichiometry: 1.0
species: 231609

214864
type: SpeciesReference
stoichiometry: 1.0
species: 231573

214876
type: SpeciesReference
stoichiometry: 1.0
species: 231397

214888
type: SpeciesReference
stoichiometry: 1.0
species: 232372

214937
type: SpeciesReference
stoichiometry: 1.0
species: 232520

214901
type: SpeciesReference
stoichiometry: 1.0
species: 231605

214925
type: SpeciesReference
stoichiometry: 1.0
species: 232075

232447
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Deoxycytidine

231406
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Glutamyl 5-phosphate

234208
type: Reaction
product: 236094
product: 236082
product: 236070
reactant: 236058
reactant: 236045
fast: false
reversible: true
name: 3-Phospho-D-glycerate:NAD+ 2-oxidoreductase

236094
type: SpeciesReference
stoichiometry: 1.0
species: 232520

236082
type: SpeciesReference
stoichiometry: 1.0
species: 231589

236070
type: SpeciesReference
stoichiometry: 1.0
species: 232002

236058
type: SpeciesReference
stoichiometry: 1.0
species: 231593

236045
type: SpeciesReference
stoichiometry: 1.0
species: 232323

232604
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Oxoacyl-CoA

232070
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: all-trans-Heptaprenyl diphosphate

233601
type: Reaction
product: 220485
product: 220473
product: 220461
reactant: 220449
reactant: 220437
fast: false
reversible: true
name: L-Homoserine:NADP+ oxidoreductase

220485
type: SpeciesReference
stoichiometry: 2.0
species: 232520

220473
type: SpeciesReference
stoichiometry: 1.0
species: 231598

220461
type: SpeciesReference
stoichiometry: 1.0
species: 231669

220449
type: SpeciesReference
stoichiometry: 1.0
species: 231597

220437
type: SpeciesReference
stoichiometry: 1.0
species: 232607

231854
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (R)-4'-Phosphopantothenoyl-L-cysteine

233453
type: Reaction
product: 216692
product: 216680
reactant: 216668
reactant: 216656
fast: false
reversible: false
name: 2.3.1.16

216692
type: SpeciesReference
stoichiometry: 1.0
species: 232407

216680
type: SpeciesReference
stoichiometry: 1.0
species: 231394

216668
type: SpeciesReference
stoichiometry: 1.0
species: 231953

216656
type: SpeciesReference
stoichiometry: 1.0
species: 231517

233344
type: Reaction
name: 5,10-Methylenetetrahydrofolate:glycine hydroxymethyltransferase
product: 214552
reversible: false
reactant: 214528
product: 214576
reactant: 214516
product: 214564
reactant: 214540
fast: false

214552
type: SpeciesReference
stoichiometry: 1.0
species: 232479

214528
type: SpeciesReference
stoichiometry: 1.0
species: 232624

214576
type: SpeciesReference
stoichiometry: 1.0
species: 231570

214516
type: SpeciesReference
stoichiometry: 1.0
species: 231397

214564
type: SpeciesReference
stoichiometry: 1.0
species: 232420

214540
type: SpeciesReference
stoichiometry: 1.0
species: 232520

231686
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Acetate (E)

234029
type: Reaction
product: 230584
product: 230572
reactant: 230559
reactant: 230547
fast: false
reversible: false
name: Fructose-1-6-bisP DH

230584
type: SpeciesReference
stoichiometry: 1.0
species: 231589

230572
type: SpeciesReference
stoichiometry: 1.0
species: 232150

232150
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 4-Ketofructose-1,6-bisphosphate

230559
type: SpeciesReference
stoichiometry: 1.0
species: 231593

230547
type: SpeciesReference
stoichiometry: 1.0
species: 231873

231873
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Fructose 1,6-bisphosphate

233572
type: Reaction
product: 219590
product: 219578
reactant: 219566
reactant: 219554
fast: false
reversible: true
name: L-Leucine:2-oxoglutarate aminotransferase

219590
type: SpeciesReference
stoichiometry: 1.0
species: 232372

219578
type: SpeciesReference
stoichiometry: 1.0
species: 231433

231433
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 4-Methyl-2-oxopentanoate

219566
type: SpeciesReference
stoichiometry: 1.0
species: 232375

219554
type: SpeciesReference
stoichiometry: 1.0
species: 231502

232551
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Cadmium (E)

232923
type: Reaction
product: 202555
product: 202543
reactant: 202531
fast: false
reversible: true
name: D-Fructose 1-phosphate D-glyceraldehyde-3-phosphate-lyase

202555
type: SpeciesReference
stoichiometry: 1.0
species: 231973

202543
type: SpeciesReference
stoichiometry: 1.0
species: 231349

202531
type: SpeciesReference
stoichiometry: 1.0
species: 232404

233297
type: Reaction
product: 213334
product: 213322
reactant: 213310
reactant: 213298
fast: false
reversible: false
name: Antiport: (Ornithine:L-Arginine)

213334
type: SpeciesReference
stoichiometry: 1.0
species: 232619

213322
type: SpeciesReference
stoichiometry: 1.0
species: 231833

213310
type: SpeciesReference
stoichiometry: 1.0
species: 231905

213298
type: SpeciesReference
stoichiometry: 1.0
species: 232676

233692
type: Reaction
product: 222674
fast: false
reversible: true
name: Exchange: (Cobalt)

222674
type: SpeciesReference
stoichiometry: 1.0
species: 231858

233196
type: Reaction
reactant: 210496
reactant: 210484
product: 210545
name: Adenosine 3',5'-bisphosphate,sulfite:oxidized-thioredoxin
product: 210521
reversible: false
product: 210509
fast: false
product: 210533

210496
type: SpeciesReference
stoichiometry: 1.0
species: 232364

232364
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3'-Phosphoadenylyl sulfate

210484
type: SpeciesReference
stoichiometry: 1.0
species: 231821

210545
type: SpeciesReference
stoichiometry: 2.0
species: 232520

210521
type: SpeciesReference
stoichiometry: 1.0
species: 232563

210509
type: SpeciesReference
stoichiometry: 1.0
species: 231818

210533
type: SpeciesReference
stoichiometry: 1.0
species: 232355

232684
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5-Amino-4-imidazolecarboxyamide

234144
type: Reaction
product: 234547
product: 234535
reactant: 234523
reactant: 234511
fast: false
reversible: true
name: Antiport: (Malate:Lactate)

234547
type: SpeciesReference
stoichiometry: 1.0
species: 232122

232122
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: (R)-Lactate (E)

234535
type: SpeciesReference
stoichiometry: 1.0
species: 232515

234523
type: SpeciesReference
stoichiometry: 1.0
species: 231326

234511
type: SpeciesReference
stoichiometry: 1.0
species: 231781

232895
type: Reaction
reactant: 201673
product: 201734
reversible: false
name: Carbon-dioxide:L-glutamine amido-ligase (ADP-forming,
product: 201685
product: 201722
reactant: 201661
product: 201697
reactant: 201637
fast: false
product: 201710
reactant: 201649

201673
type: SpeciesReference
stoichiometry: 1.0
species: 231570

201734
type: SpeciesReference
stoichiometry: 2.0
species: 232520

201685
type: SpeciesReference
stoichiometry: 2.0
species: 231605

201722
type: SpeciesReference
stoichiometry: 1.0
species: 232648

201661
type: SpeciesReference
stoichiometry: 1.0
species: 232483

201697
type: SpeciesReference
stoichiometry: 1.0
species: 231609

201637
type: SpeciesReference
stoichiometry: 2.0
species: 231573

201710
type: SpeciesReference
stoichiometry: 1.0
species: 232372

201649
type: SpeciesReference
stoichiometry: 1.0
species: 232612

232428
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Siroheme

232315
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Pantothenate

233920
type: Reaction
product: 227917
product: 227905
reactant: 227893
fast: false
reversible: true
name: (S)-Hydroxyhexanoyl-CoA hydro-lyase

227917
type: SpeciesReference
stoichiometry: 1.0
species: 231570

227905
type: SpeciesReference
stoichiometry: 1.0
species: 231705

227893
type: SpeciesReference
stoichiometry: 1.0
species: 232126

232126
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-Hydroxyhexanoyl-CoA

234153
type: Reaction
product: 234704
product: 234692
reactant: 234680
reactant: 234668
fast: false
reversible: true
name: Symport: (Lactate:H+)

234704
type: SpeciesReference
stoichiometry: 1.0
species: 231326

234692
type: SpeciesReference
stoichiometry: 1.0
species: 232520

234680
type: SpeciesReference
stoichiometry: 1.0
species: 232166

234668
type: SpeciesReference
stoichiometry: 1.0
species: 232122

233552
type: Reaction
product: 219091
product: 219079
product: 219067
reactant: 219055
reactant: 219043
fast: false
reversible: true
name: Prephenate:NAD+ oxidoreductase(decarboxylating)

219091
type: SpeciesReference
stoichiometry: 1.0
species: 231589

219079
type: SpeciesReference
stoichiometry: 1.0
species: 231518

219067
type: SpeciesReference
stoichiometry: 1.0
species: 232086

219055
type: SpeciesReference
stoichiometry: 1.0
species: 231593

219043
type: SpeciesReference
stoichiometry: 1.0
species: 231338

231338
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Prephenate

234081
type: Reaction
product: 232220
fast: false
reversible: true
name: Exchange: (Deoxyadenosine)

232220
type: SpeciesReference
stoichiometry: 1.0
species: 232359

233277
type: Reaction
product: 212749
reactant: 212737
fast: false
reversible: false
name: Influx: (Potassium)

212749
type: SpeciesReference
stoichiometry: 1.0
species: 231418

212737
type: SpeciesReference
stoichiometry: 1.0
species: 232427

231702
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Decanoyl-CoA

234124
type: Reaction
product: 233646
product: 233634
reactant: 233622
reactant: 233610
fast: false
reversible: true
name: Symport: (Uracil:H+)

233646
type: SpeciesReference
stoichiometry: 1.0
species: 232520

233634
type: SpeciesReference
stoichiometry: 1.0
species: 231361

233622
type: SpeciesReference
stoichiometry: 1.0
species: 232166

233610
type: SpeciesReference
stoichiometry: 1.0
species: 231646

234221
type: Reaction
product: 236506
product: 236494
reactant: 236482
fast: false
reversible: true
name: Acetyl-CoA:acetyl-CoA C-acetyltransferase

236506
type: SpeciesReference
stoichiometry: 1.0
species: 231769

236494
type: SpeciesReference
stoichiometry: 1.0
species: 231517

236482
type: SpeciesReference
stoichiometry: 2.0
species: 232407

233877
type: Reaction
product: 227193
product: 227181
product: 227169
reactant: 227157
reactant: 227145
fast: false
reversible: false
name: 2.7.1.49

227193
type: SpeciesReference
stoichiometry: 1.0
species: 232520

227181
type: SpeciesReference
stoichiometry: 1.0
species: 231522

231522
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 4-Amino-2-methyl-5-phosphomethylpyrimidine

227169
type: SpeciesReference
stoichiometry: 1.0
species: 231605

227157
type: SpeciesReference
stoichiometry: 1.0
species: 231770

231770
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 4-Amino-5-hydroxymethyl-2-methylpyrimidine

227145
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233544
type: Reaction
product: 218899
product: 218887
product: 218875
reactant: 218863
reactant: 218851
fast: false
reversible: false
name: ATP:D-Gluconate 6-phosphotransferase

218899
type: SpeciesReference
stoichiometry: 1.0
species: 232520

218887
type: SpeciesReference
stoichiometry: 1.0
species: 231841

231841
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 6-Phospho-D-gluconate

218875
type: SpeciesReference
stoichiometry: 1.0
species: 231605

218863
type: SpeciesReference
stoichiometry: 1.0
species: 231325

231325
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Gluconic acid

218851
type: SpeciesReference
stoichiometry: 1.0
species: 231573

231762
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: CO2 (E)

232701
type: Reaction
product: 196241
product: 196229
reactant: 196217
reactant: 196205
fast: false
reversible: false
name: D-Fructose-2,6-bisphosphate 2-phosphohydrolase

196241
type: SpeciesReference
stoichiometry: 1.0
species: 232504

196229
type: SpeciesReference
stoichiometry: 1.0
species: 231609

196217
type: SpeciesReference
stoichiometry: 1.0
species: 231570

196205
type: SpeciesReference
stoichiometry: 1.0
species: 231926

233569
type: Reaction
product: 219542
product: 219530
product: 219518
reactant: 219506
reactant: 219494
fast: false
reversible: false
name: Formamidopyrimidine nucleoside triphosphate 7,8-8,9-dihydrolase

219542
type: SpeciesReference
stoichiometry: 1.0
species: 232520

219530
type: SpeciesReference
stoichiometry: 1.0
species: 232307

219518
type: SpeciesReference
stoichiometry: 1.0
species: 231618

219506
type: SpeciesReference
stoichiometry: 1.0
species: 231570

219494
type: SpeciesReference
stoichiometry: 1.0
species: 231622

233316
type: Reaction
product: 213732
product: 213720
reactant: 213708
reactant: 213696
fast: false
reversible: false
name: Symport: (Biotin:H+)

213732
type: SpeciesReference
stoichiometry: 1.0
species: 232520

213720
type: SpeciesReference
stoichiometry: 1.0
species: 231493

231493
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Biotin

213708
type: SpeciesReference
stoichiometry: 1.0
species: 232166

213696
type: SpeciesReference
stoichiometry: 1.0
species: 231722

231722
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Biotin (E)

233436
type: Reaction
product: 216328
product: 216316
reactant: 216304
reactant: 216292
fast: false
reversible: true
name: L-Tyrosine:2-oxoglutarate aminotransferase

216328
type: SpeciesReference
stoichiometry: 1.0
species: 232372

216316
type: SpeciesReference
stoichiometry: 1.0
species: 232086

216304
type: SpeciesReference
stoichiometry: 1.0
species: 232375

216292
type: SpeciesReference
stoichiometry: 1.0
species: 232516

232588
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Acetyl adenylate

232747
type: Reaction
product: 197602
product: 197590
product: 197578
reactant: 197566
reactant: 197554
fast: false
reversible: true
name: Ethanol:NAD+ oxidoreductase

197602
type: SpeciesReference
stoichiometry: 1.0
species: 232520

197590
type: SpeciesReference
stoichiometry: 1.0
species: 231589

197578
type: SpeciesReference
stoichiometry: 1.0
species: 232508

232508
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Acetaldehyde

197566
type: SpeciesReference
stoichiometry: 1.0
species: 231593

197554
type: SpeciesReference
stoichiometry: 1.0
species: 231957

231957
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Ethanol

234077
type: Reaction
product: 232124
fast: false
reversible: true
name: Exchange: (D-Ribose)

232124
type: SpeciesReference
stoichiometry: 1.0
species: 231721

233553
type: Reaction
product: 219141
product: 219128
reactant: 219115
reactant: 219103
fast: false
reversible: false
name: 3.5.4.5; 3.5.4.14

219141
type: SpeciesReference
stoichiometry: 1.0
species: 231545

219128
type: SpeciesReference
stoichiometry: 1.0
species: 231434

231434
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Deoxyuridine

219115
type: SpeciesReference
stoichiometry: 1.0
species: 231570

219103
type: SpeciesReference
stoichiometry: 1.0
species: 232447

234197
type: Reaction
product: 235839
reactant: 235827
fast: false
reversible: true
name: 2-Phospho-D-glycerate 2,3-phosphomutase

235839
type: SpeciesReference
stoichiometry: 1.0
species: 232323

235827
type: SpeciesReference
stoichiometry: 1.0
species: 231498

234125
type: Reaction
reactant: 233682
product: 233706
reactant: 233670
product: 233718
reversible: true
reactant: 233658
name: UDPglucose:NAD+ oxidoreductase
fast: false
product: 233694

233682
type: SpeciesReference
stoichiometry: 2.0
species: 231593

233706
type: SpeciesReference
stoichiometry: 2.0
species: 231589

233670
type: SpeciesReference
stoichiometry: 1.0
species: 231570

233718
type: SpeciesReference
stoichiometry: 3.0
species: 232520

233658
type: SpeciesReference
stoichiometry: 1.0
species: 232384

233694
type: SpeciesReference
stoichiometry: 1.0
species: 232579

232579
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: UDPglucuronate

233420
type: Reaction
product: 216024
fast: false
reversible: true
name: Exchange: (L-Aspartate)

216024
type: SpeciesReference
stoichiometry: 1.0
species: 231970

231970
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Aspartate (E)

233749
type: Reaction
product: 224097
product: 224085
reactant: 224073
reactant: 224061
fast: false
reversible: true
name: Octanoyl-CoA:acetyl-CoA C-acyltransferase

224097
type: SpeciesReference
stoichiometry: 1.0
species: 232135

224085
type: SpeciesReference
stoichiometry: 1.0
species: 231517

224073
type: SpeciesReference
stoichiometry: 1.0
species: 232407

224061
type: SpeciesReference
stoichiometry: 1.0
species: 232050

232050
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Octanoyl-CoA

233325
type: Reaction
reversible: false
fast: false
reactant: 214021
reactant: 214009
product: 214069
name: ATP:pyruvate,water phosphotransferase
product: 214045
product: 214057
reactant: 214033
product: 214081

214021
type: SpeciesReference
stoichiometry: 1.0
species: 232411

214009
type: SpeciesReference
stoichiometry: 1.0
species: 231573

214069
type: SpeciesReference
stoichiometry: 1.0
species: 231609

214045
type: SpeciesReference
stoichiometry: 1.0
species: 232396

214057
type: SpeciesReference
stoichiometry: 1.0
species: 232671

214033
type: SpeciesReference
stoichiometry: 1.0
species: 231570

214081
type: SpeciesReference
stoichiometry: 2.0
species: 232520

233025
type: Reaction
product: 205343
fast: false
reversible: true
name: Exchange: (Vit B12)

205343
type: SpeciesReference
stoichiometry: 1.0
species: 232672

231357
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Cysteate

233616
type: Reaction
reactant: 220806
reactant: 220794
reversible: true
reactant: 220782
fast: false
product: 220830
product: 220818
product: 220842
name: (S)-3-Hydroxy-3-methylglutaryl-CoA acetoacetyl-CoA-lyase

220806
type: SpeciesReference
stoichiometry: 1.0
species: 232520

220794
type: SpeciesReference
stoichiometry: 1.0
species: 231517

220782
type: SpeciesReference
stoichiometry: 1.0
species: 231913

220830
type: SpeciesReference
stoichiometry: 1.0
species: 231570

220818
type: SpeciesReference
stoichiometry: 1.0
species: 232407

220842
type: SpeciesReference
stoichiometry: 1.0
species: 231769

233621
type: Reaction
product: 220974
reactant: 220950
reactant: 220938
reversible: false
product: 220962
name: Tetrahydrofolate:L-glutamate gamma-ligase (ADP-forming)
product: 220999
product: 220986
fast: false
reactant: 220926

220974
type: SpeciesReference
stoichiometry: 1.0
species: 231609

220950
type: SpeciesReference
stoichiometry: 1.0
species: 232372

220938
type: SpeciesReference
stoichiometry: 1.0
species: 231446

220962
type: SpeciesReference
stoichiometry: 1.0
species: 231605

220999
type: SpeciesReference
stoichiometry: 1.0
species: 232520

220986
type: SpeciesReference
stoichiometry: 1.0
species: 231581

220926
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232013
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cadmium

233473
type: Reaction
product: 217052
fast: false
reversible: true
name: Exchange: (L-Valine)

217052
type: SpeciesReference
stoichiometry: 1.0
species: 232005

233140
type: Reaction
product: 208917
reactant: 208880
product: 208904
fast: false
reversible: false
product: 208943
name: Prephytoene diphosphate:geranylgeranyl-diphosphate
product: 208930
reactant: 208892

208917
type: SpeciesReference
stoichiometry: 1.0
species: 231597

208880
type: SpeciesReference
stoichiometry: 1.0
species: 231602

208904
type: SpeciesReference
stoichiometry: 1.0
species: 231513

208943
type: SpeciesReference
stoichiometry: 2.0
species: 232520

208930
type: SpeciesReference
stoichiometry: 1.0
species: 232267

208892
type: SpeciesReference
stoichiometry: 1.0
species: 231598

233976
type: Reaction
product: 229181
product: 229169
product: 229157
reactant: 229145
reactant: 229133
fast: false
reversible: false
name: MoCo biosynthesis

229181
type: SpeciesReference
stoichiometry: 1.0
species: 231513

229169
type: SpeciesReference
stoichiometry: 1.0
species: 232396

229157
type: SpeciesReference
stoichiometry: 1.0
species: 232218

229145
type: SpeciesReference
stoichiometry: 1.0
species: 231573

229133
type: SpeciesReference
stoichiometry: 1.0
species: 231621

233165
type: Reaction
product: 209647
product: 209635
reactant: 209623
reactant: 209611
fast: false
reversible: false
name: 2.3.1.-

209647
type: SpeciesReference
stoichiometry: 1.0
species: 231981

209635
type: SpeciesReference
stoichiometry: 1.0
species: 232376

209623
type: SpeciesReference
stoichiometry: 1.0
species: 231517

209611
type: SpeciesReference
stoichiometry: 1.0
species: 232336

232336
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: S-(3-Methylbutanoyl)-dihydrolipoamide

232523
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Molybdenum

231869
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5-(5-Phospho-D-ribosylaminoformimino)-1-(5-phosphoribosyl)-

233505
type: Reaction
product: 217693
product: 217681
reactant: 217669
reactant: 217657
fast: false
reversible: true
name: ATP:dTMP phosphotransferase

217693
type: SpeciesReference
stoichiometry: 1.0
species: 232079

232079
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: dUDP

217681
type: SpeciesReference
stoichiometry: 1.0
species: 231605

217669
type: SpeciesReference
stoichiometry: 1.0
species: 231945

217657
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233488
type: Reaction
product: 217257
product: 217245
reactant: 217233
reactant: 217221
fast: false
reversible: false
name: ATP:nicotinamide-nucleotide adenylyltransferase

217257
type: SpeciesReference
stoichiometry: 1.0
species: 231593

217245
type: SpeciesReference
stoichiometry: 1.0
species: 231513

217233
type: SpeciesReference
stoichiometry: 1.0
species: 231717

217221
type: SpeciesReference
stoichiometry: 1.0
species: 231573

234049
type: Reaction
product: 231082
reactant: 231070
fast: false
reversible: false
name: ABC-T: (Cadmium)

231082
type: SpeciesReference
stoichiometry: 1.0
species: 232013

231070
type: SpeciesReference
stoichiometry: 1.0
species: 232551

233032
type: Reaction
fast: false
product: 205523
name: L-Glutamate:tRNA(Gln) ligase (AMP-forming)
reactant: 205463
product: 205499
reactant: 205475
product: 205511
product: 205487
reactant: 205451
reversible: false

205523
type: SpeciesReference
stoichiometry: 1.0
species: 232520

205463
type: SpeciesReference
stoichiometry: 1.0
species: 232372

205499
type: SpeciesReference
stoichiometry: 1.0
species: 231513

205475
type: SpeciesReference
stoichiometry: 1.0
species: 232595

205511
type: SpeciesReference
stoichiometry: 1.0
species: 231578

205487
type: SpeciesReference
stoichiometry: 1.0
species: 232396

205451
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233981
type: Reaction
product: 229326
product: 229314
reactant: 229302
fast: false
reversible: false
name: ThiF

229326
type: SpeciesReference
stoichiometry: 1.0
species: 231513

229314
type: SpeciesReference
stoichiometry: 1.0
species: 231886

229302
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232851
type: Reaction
product: 200412
reversible: false
product: 200387
product: 200375
name: O-Succinyl-L-homoserine succinate-lyase (adding cysteine)
reactant: 200351
fast: false
reactant: 200363
product: 200400

200412
type: SpeciesReference
stoichiometry: 2.0
species: 232520

200387
type: SpeciesReference
stoichiometry: 1.0
species: 232287

200375
type: SpeciesReference
stoichiometry: 1.0
species: 231362

200351
type: SpeciesReference
stoichiometry: 1.0
species: 232049

200363
type: SpeciesReference
stoichiometry: 1.0
species: 231570

200400
type: SpeciesReference
stoichiometry: 1.0
species: 231545

233377
type: Reaction
product: 215275
product: 215263
reactant: 215251
reactant: 215239
fast: false
reversible: true
name: Symport: (Deoxyadenosine:H+)

215275
type: SpeciesReference
stoichiometry: 1.0
species: 232520

215263
type: SpeciesReference
stoichiometry: 1.0
species: 231874

215251
type: SpeciesReference
stoichiometry: 1.0
species: 232166

215239
type: SpeciesReference
stoichiometry: 1.0
species: 232359

232876
type: Reaction
product: 201082
product: 201106
reactant: 201045
reversible: true
name: Aldehyde:NADP+ oxidoreductase
fast: false
product: 201094
reactant: 201069
reactant: 201057

201082
type: SpeciesReference
stoichiometry: 1.0
species: 231385

201106
type: SpeciesReference
stoichiometry: 2.0
species: 232520

201045
type: SpeciesReference
stoichiometry: 1.0
species: 231530

201094
type: SpeciesReference
stoichiometry: 1.0
species: 231598

201069
type: SpeciesReference
stoichiometry: 1.0
species: 231570

201057
type: SpeciesReference
stoichiometry: 1.0
species: 231597

233968
type: Reaction
name: Phosphomevalonate decarboxylase
product: 228964
reactant: 228928
reactant: 228940
product: 228977
fast: false
product: 228989
reversible: false
product: 228952

228964
type: SpeciesReference
stoichiometry: 1.0
species: 231605

228928
type: SpeciesReference
stoichiometry: 1.0
species: 231817

231817
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (R)-5-Phosphomevalonate

228940
type: SpeciesReference
stoichiometry: 1.0
species: 231573

228977
type: SpeciesReference
stoichiometry: 1.0
species: 231609

228989
type: SpeciesReference
stoichiometry: 1.0
species: 231518

228952
type: SpeciesReference
stoichiometry: 1.0
species: 232210

232190
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: BM: Cofactors (OD ml)

233092
type: Reaction
product: 207082
product: 207070
reactant: 207057
fast: false
reversible: false
name: (R)-2,3-Dihydroxy-3-methylbutanoate hydro-lyase

207082
type: SpeciesReference
stoichiometry: 1.0
species: 231570

207070
type: SpeciesReference
stoichiometry: 1.0
species: 232475

207057
type: SpeciesReference
stoichiometry: 1.0
species: 232330

233244
type: Reaction
product: 211844
product: 211832
reactant: 211820
reactant: 211808
fast: false
reversible: true
name: Symport: (L-Glutamine:H+)

211844
type: SpeciesReference
stoichiometry: 1.0
species: 232520

211832
type: SpeciesReference
stoichiometry: 1.0
species: 232612

211820
type: SpeciesReference
stoichiometry: 1.0
species: 232166

211808
type: SpeciesReference
stoichiometry: 1.0
species: 231897

232743
type: Reaction
product: 197457
name: 2.1.1.132
product: 197481
reactant: 197421
fast: false
product: 197445
product: 197469
reversible: true
reactant: 197433

197457
type: SpeciesReference
stoichiometry: 2.0
species: 232412

197481
type: SpeciesReference
stoichiometry: 1.0
species: 232520

197421
type: SpeciesReference
stoichiometry: 1.0
species: 231738

231738
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cobalt-dihydro-precorrin 6

197445
type: SpeciesReference
stoichiometry: 1.0
species: 231742

231742
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cobalt-precorrin 8

197469
type: SpeciesReference
stoichiometry: 1.0
species: 231518

197433
type: SpeciesReference
stoichiometry: 2.0
species: 231549

233681
type: Reaction
product: 222506
fast: false
reversible: true
name: Exchange: (Na+)

222506
type: SpeciesReference
stoichiometry: 1.0
species: 232062

233720
type: Reaction
product: 223410
product: 223398
reactant: 223386
reactant: 223374
fast: false
reversible: true
name: Succinyl-CoA:3-oxo-acid CoA-transferase

223410
type: SpeciesReference
stoichiometry: 1.0
species: 231769

223398
type: SpeciesReference
stoichiometry: 1.0
species: 232287

223386
type: SpeciesReference
stoichiometry: 1.0
species: 232587

223374
type: SpeciesReference
stoichiometry: 1.0
species: 232568

232937
type: Reaction
product: 203110
name: Citrate oxaloacetate-lyase ((pro-3S)-CH2COO- -> acetyl-CoA)
product: 203122
reactant: 203098
reactant: 203086
reversible: false
product: 203134
reactant: 203074
fast: false

203110
type: SpeciesReference
stoichiometry: 1.0
species: 232571

203122
type: SpeciesReference
stoichiometry: 1.0
species: 231517

203098
type: SpeciesReference
stoichiometry: 1.0
species: 232419

203086
type: SpeciesReference
stoichiometry: 1.0
species: 231570

203134
type: SpeciesReference
stoichiometry: 1.0
species: 232520

203074
type: SpeciesReference
stoichiometry: 1.0
species: 232407

232860
type: Reaction
product: 200682
product: 200669
product: 200656
reactant: 200643
reactant: 200630
fast: false
reversible: false
name: 2.5.1.-

200682
type: SpeciesReference
stoichiometry: 1.0
species: 232520

200669
type: SpeciesReference
stoichiometry: 1.0
species: 231513

200656
type: SpeciesReference
stoichiometry: 1.0
species: 232073

232073
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: all-trans-Pentaprenyl diphosphate

200643
type: SpeciesReference
stoichiometry: 1.0
species: 231458

200630
type: SpeciesReference
stoichiometry: 1.0
species: 231877

234253
type: Reaction
product: 237376
reactant: 237364
fast: false
reversible: true
name: Chorismate hydroxymutase

237376
type: SpeciesReference
stoichiometry: 1.0
species: 232436

232436
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Isochorismate

237364
type: SpeciesReference
stoichiometry: 1.0
species: 231337

232123
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Oxohexanoyl-CoA

231690
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Creatine

233008
type: Reaction
product: 205016
product: 205004
product: 204992
reactant: 204980
reactant: 204967
fast: false
reversible: false
name: ATP:pantothenate 4'-phosphotransferase

205016
type: SpeciesReference
stoichiometry: 1.0
species: 232520

205004
type: SpeciesReference
stoichiometry: 1.0
species: 231849

231849
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-4'-Phosphopantothenate

204992
type: SpeciesReference
stoichiometry: 1.0
species: 231605

204980
type: SpeciesReference
stoichiometry: 1.0
species: 232315

204967
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233084
type: Reaction
product: 206864
product: 206852
product: 206840
reactant: 206828
reactant: 206816
fast: false
reversible: false
name: ATP:adenylylsulfate 3'-phosphotransferase

206864
type: SpeciesReference
stoichiometry: 1.0
species: 232520

206852
type: SpeciesReference
stoichiometry: 1.0
species: 232364

206840
type: SpeciesReference
stoichiometry: 1.0
species: 231605

206828
type: SpeciesReference
stoichiometry: 1.0
species: 231469

206816
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232798
type: Reaction
product: 198892
product: 198880
reactant: 198868
fast: false
reversible: true
name: 2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate phosphate-lyase

198892
type: SpeciesReference
stoichiometry: 1.0
species: 231609

198880
type: SpeciesReference
stoichiometry: 1.0
species: 232468

198868
type: SpeciesReference
stoichiometry: 1.0
species: 231529

231529
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate

232431
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5-(2-Hydroxyethyl)-4-methylthiazole

233501
type: Reaction
product: 217597
product: 217584
reactant: 217572
reactant: 217560
fast: false
reversible: true
name: ATP:dTMP phosphotransferase

217597
type: SpeciesReference
stoichiometry: 1.0
species: 231938

217584
type: SpeciesReference
stoichiometry: 1.0
species: 231605

217572
type: SpeciesReference
stoichiometry: 1.0
species: 231946

217560
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232818
type: Reaction
product: 199459
product: 199447
reactant: 199435
reactant: 199423
reactant: 199411
fast: false
reversible: true
name: (S)-Dihydroorotate:oxygen oxidoreductase

199459
type: SpeciesReference
stoichiometry: 1.0
species: 232368

199447
type: SpeciesReference
stoichiometry: 1.0
species: 232555

232555
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Orotate

199435
type: SpeciesReference
stoichiometry: 1.0
species: 232520

199423
type: SpeciesReference
stoichiometry: 1.0
species: 231606

199411
type: SpeciesReference
stoichiometry: 1.0
species: 231797

231454
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Galactose

233653
type: Reaction
product: 221784
product: 221772
product: 221760
reactant: 221748
reactant: 221736
fast: false
reversible: true
name: ATP:D-glucose 6-phosphotransferase

221784
type: SpeciesReference
stoichiometry: 1.0
species: 232520

221772
type: SpeciesReference
stoichiometry: 1.0
species: 231917

221760
type: SpeciesReference
stoichiometry: 1.0
species: 231605

221748
type: SpeciesReference
stoichiometry: 1.0
species: 232615

221736
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233909
type: Reaction
product: 227797
fast: false
reversible: true
name: Exchange: (Glycerol)

227797
type: SpeciesReference
stoichiometry: 1.0
species: 231629

232151
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Creatinine

233425
type: Reaction
product: 216097
reactant: 216085
fast: false
reversible: true
name: Diffusion: (H2O)

216097
type: SpeciesReference
stoichiometry: 1.0
species: 231570

216085
type: SpeciesReference
stoichiometry: 1.0
species: 231794

231794
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: H2O (E)

232989
type: Reaction
fast: false
product: 204366
reactant: 204317
reactant: 204305
name: L-Methionine:tRNAMet ligase (AMP-forming)
product: 204329
product: 204354
product: 204342
reactant: 204293
reversible: false

204366
type: SpeciesReference
stoichiometry: 1.0
species: 232520

204317
type: SpeciesReference
stoichiometry: 1.0
species: 232647

232647
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Met)

204305
type: SpeciesReference
stoichiometry: 1.0
species: 232668

204329
type: SpeciesReference
stoichiometry: 1.0
species: 232396

204354
type: SpeciesReference
stoichiometry: 1.0
species: 231537

231537
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Methionyl-tRNA

204342
type: SpeciesReference
stoichiometry: 1.0
species: 231513

204293
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232799
type: Reaction
name: (R)-Lactaldehyde:NAD+ oxidoreductase (glutathione-formylating)
reversible: true
reactant: 198905
fast: false
product: 198965
reactant: 198917
reactant: 198929
product: 198953
product: 198941

198905
type: SpeciesReference
stoichiometry: 1.0
species: 231477

198965
type: SpeciesReference
stoichiometry: 1.0
species: 232520

198917
type: SpeciesReference
stoichiometry: 1.0
species: 232363

198929
type: SpeciesReference
stoichiometry: 1.0
species: 231593

198953
type: SpeciesReference
stoichiometry: 1.0
species: 231589

198941
type: SpeciesReference
stoichiometry: 1.0
species: 231330

231330
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (R)-S-Lactoylglutathione

232815
type: Reaction
product: 199399
product: 199387
reactant: 199374
reactant: 199362
fast: false
reversible: false
name: 2'-Deoxycytidine 5'-monophosphate phosphohydrolase

199399
type: SpeciesReference
stoichiometry: 1.0
species: 231609

199387
type: SpeciesReference
stoichiometry: 1.0
species: 232447

199374
type: SpeciesReference
stoichiometry: 1.0
species: 231570

199362
type: SpeciesReference
stoichiometry: 1.0
species: 231417

233540
type: Reaction
reversible: false
reactant: 218755
fast: false
product: 218779
product: 218791
name: Succinate-semialdehyde:NADP+ oxidoreductase
reactant: 218731
reactant: 218743
product: 218767

218755
type: SpeciesReference
stoichiometry: 1.0
species: 231570

218779
type: SpeciesReference
stoichiometry: 1.0
species: 231598

218791
type: SpeciesReference
stoichiometry: 2.0
species: 232520

218731
type: SpeciesReference
stoichiometry: 1.0
species: 231429

218743
type: SpeciesReference
stoichiometry: 1.0
species: 231597

218767
type: SpeciesReference
stoichiometry: 1.0
species: 232287

233916
type: Reaction
product: 227869
fast: false
reversible: true
name: Exchange: (Lactate)

227869
type: SpeciesReference
stoichiometry: 1.0
species: 232122

233801
type: Reaction
reversible: false
reactant: 225260
reactant: 225248
fast: false
product: 225285
reactant: 225273
product: 225321
product: 225297
product: 225309
name: ABC-T: (Copper)

225260
type: SpeciesReference
stoichiometry: 1.0
species: 231570

225248
type: SpeciesReference
stoichiometry: 1.0
species: 231573

225285
type: SpeciesReference
stoichiometry: 1.0
species: 231605

225273
type: SpeciesReference
stoichiometry: 1.0
species: 231853

225321
type: SpeciesReference
stoichiometry: 1.0
species: 232696

225297
type: SpeciesReference
stoichiometry: 1.0
species: 231609

225309
type: SpeciesReference
stoichiometry: 1.0
species: 232520

233649
type: Reaction
product: 221687
product: 221675
product: 221663
reactant: 221651
reactant: 221639
fast: false
reversible: true
name: ATP:D-ribose-5-phosphate pyrophosphotransferase

221687
type: SpeciesReference
stoichiometry: 1.0
species: 232520

221675
type: SpeciesReference
stoichiometry: 1.0
species: 231310

221663
type: SpeciesReference
stoichiometry: 1.0
species: 232396

221651
type: SpeciesReference
stoichiometry: 1.0
species: 231314

221639
type: SpeciesReference
stoichiometry: 1.0
species: 231573

231978
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Retinal

234180
type: Reaction
product: 235382
product: 235370
reactant: 235358
reactant: 235346
fast: false
reversible: true
name: L-Alanine:2-oxoglutarate aminotransferase

235382
type: SpeciesReference
stoichiometry: 1.0
species: 232372

235370
type: SpeciesReference
stoichiometry: 1.0
species: 232411

235358
type: SpeciesReference
stoichiometry: 1.0
species: 232375

235346
type: SpeciesReference
stoichiometry: 1.0
species: 232291

232904
type: Reaction
product: 202024
product: 202011
reactant: 201999
reactant: 201987
fast: false
reversible: true
name: ATP:nucleoside-diphosphate phosphatransferase

202024
type: SpeciesReference
stoichiometry: 1.0
species: 232608

202011
type: SpeciesReference
stoichiometry: 1.0
species: 231605

201999
type: SpeciesReference
stoichiometry: 1.0
species: 231350

201987
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233777
type: Reaction
reversible: true
fast: false
product: 224747
product: 224760
reactant: 224723
product: 224772
name: 6.3.1.10
product: 224784
reactant: 224711
reactant: 224735

224747
type: SpeciesReference
stoichiometry: 1.0
species: 231553

231553
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Adenosyl cobinamide phosphate

224760
type: SpeciesReference
stoichiometry: 1.0
species: 231605

224723
type: SpeciesReference
stoichiometry: 1.0
species: 232480

224772
type: SpeciesReference
stoichiometry: 1.0
species: 231609

224784
type: SpeciesReference
stoichiometry: 1.0
species: 232520

224711
type: SpeciesReference
stoichiometry: 1.0
species: 231569

224735
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233021
type: Reaction
product: 205318
fast: false
reversible: true
name: Exchange: (Pantothenate)

205318
type: SpeciesReference
stoichiometry: 1.0
species: 231677

234121
type: Reaction
product: 233598
product: 233586
reactant: 233574
reactant: 233562
fast: false
reversible: true
name: Symport: (Uridine:H+)

233598
type: SpeciesReference
stoichiometry: 1.0
species: 232520

233586
type: SpeciesReference
stoichiometry: 1.0
species: 232544

233574
type: SpeciesReference
stoichiometry: 1.0
species: 232166

233562
type: SpeciesReference
stoichiometry: 1.0
species: 232037

232037
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Uridine (E)

232639
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Pro)

233644
type: Reaction
product: 221529
reactant: 221517
fast: false
reversible: true
name: D-Ribose-5-phosphate ketol-isomerase

221529
type: SpeciesReference
stoichiometry: 1.0
species: 232334

221517
type: SpeciesReference
stoichiometry: 1.0
species: 231314

233249
type: Reaction
product: 211988
product: 211976
reactant: 211964
reactant: 211952
fast: false
reversible: true
name: Symport: (L-Histidine:H+)

211988
type: SpeciesReference
stoichiometry: 1.0
species: 232520

211976
type: SpeciesReference
stoichiometry: 1.0
species: 231410

211964
type: SpeciesReference
stoichiometry: 1.0
species: 232166

211952
type: SpeciesReference
stoichiometry: 1.0
species: 231666

231666
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Histidine (E)

234216
type: Reaction
product: 236337
product: 236325
product: 236313
reactant: 236301
reactant: 236289
fast: false
reversible: false
name: Acetyl adenylate:CoA ligase (AMP-forming)

236337
type: SpeciesReference
stoichiometry: 1.0
species: 232520

236325
type: SpeciesReference
stoichiometry: 1.0
species: 232407

236313
type: SpeciesReference
stoichiometry: 1.0
species: 232396

236301
type: SpeciesReference
stoichiometry: 1.0
species: 231517

236289
type: SpeciesReference
stoichiometry: 1.0
species: 232588

232960
type: Reaction
product: 203714
product: 203678
product: 203690
reactant: 203665
reactant: 203653
product: 203702
reactant: 203640
reversible: false
fast: false
name: 6.1.1.15

203714
type: SpeciesReference
stoichiometry: 1.0
species: 232520

203678
type: SpeciesReference
stoichiometry: 1.0
species: 232396

203690
type: SpeciesReference
stoichiometry: 1.0
species: 231513

203665
type: SpeciesReference
stoichiometry: 1.0
species: 232639

203653
type: SpeciesReference
stoichiometry: 1.0
species: 232512

203702
type: SpeciesReference
stoichiometry: 1.0
species: 232107

203640
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232400
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Lipoylprotein

232985
type: Reaction
product: 204195
product: 204183
reactant: 204171
reactant: 204159
fast: false
reversible: false
name: 2,5-Diamino-6-hydroxy-4-(5-phosphoribosylamino)-pyrimidine

204195
type: SpeciesReference
stoichiometry: 1.0
species: 231545

204183
type: SpeciesReference
stoichiometry: 1.0
species: 231814

204171
type: SpeciesReference
stoichiometry: 1.0
species: 231570

204159
type: SpeciesReference
stoichiometry: 1.0
species: 232227

232227
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2,5-Diamino-6-hydroxy-4-(5'-phosphoribosylamino)-pyrimidine

231710
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: D-Galactose (E)

234181
type: Reaction
product: 235418
product: 235406
reactant: 235394
fast: false
reversible: true
name: 3-Hydroxyisopentyl-CoA hydro-lyase

235418
type: SpeciesReference
stoichiometry: 1.0
species: 231570

235406
type: SpeciesReference
stoichiometry: 1.0
species: 231353

235394
type: SpeciesReference
stoichiometry: 1.0
species: 232643

232643
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Hydroxyisovaleryl-CoA

233636
type: Reaction
product: 221361
product: 221349
reactant: 221337
reactant: 221325
fast: false
reversible: false
name: ATP:N-acetyl-L-glutamate 5-phosphotransferase

221361
type: SpeciesReference
stoichiometry: 1.0
species: 232536

221349
type: SpeciesReference
stoichiometry: 1.0
species: 231605

221337
type: SpeciesReference
stoichiometry: 1.0
species: 231442

231442
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: N-Acetyl-L-glutamate

221325
type: SpeciesReference
stoichiometry: 1.0
species: 231573

231374
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Methyl-2-oxopentanoate

233521
type: Reaction
reactant: 218188
fast: false
product: 218212
reversible: false
product: 218237
reactant: 218176
product: 218225
reactant: 218200
name: Succinate-semialdehyde:NAD+ oxidoreductase

218188
type: SpeciesReference
stoichiometry: 1.0
species: 231593

218212
type: SpeciesReference
stoichiometry: 1.0
species: 232287

218237
type: SpeciesReference
stoichiometry: 2.0
species: 232520

218176
type: SpeciesReference
stoichiometry: 1.0
species: 231429

218225
type: SpeciesReference
stoichiometry: 1.0
species: 231589

218200
type: SpeciesReference
stoichiometry: 1.0
species: 231570

233373
type: Reaction
product: 215178
product: 215166
reactant: 215153
reactant: 215141
fast: false
reversible: true
name: Symport: (Cytidine:H+)

215178
type: SpeciesReference
stoichiometry: 1.0
species: 232520

215166
type: SpeciesReference
stoichiometry: 1.0
species: 231965

215153
type: SpeciesReference
stoichiometry: 1.0
species: 232166

215141
type: SpeciesReference
stoichiometry: 1.0
species: 232692

232692
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Cytidine (E)

232540
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Sulfide

233457
type: Reaction
product: 216770
product: 216758
product: 216746
reactant: 216732
reactant: 216719
fast: false
reversible: true
name: Propinol adenylate:CoA ligase (AMP-forming)

216770
type: SpeciesReference
stoichiometry: 1.0
species: 232520

216758
type: SpeciesReference
stoichiometry: 1.0
species: 231394

216746
type: SpeciesReference
stoichiometry: 1.0
species: 232396

216732
type: SpeciesReference
stoichiometry: 1.0
species: 231517

216719
type: SpeciesReference
stoichiometry: 1.0
species: 232322

233240
type: Reaction
product: 211748
product: 211736
product: 211724
reactant: 211712
reactant: 211700
fast: false
reversible: false
name: 2'-Deoxyadenosine 5'-diphosphate:oxidized-thioredoxin

211748
type: SpeciesReference
stoichiometry: 1.0
species: 231570

211736
type: SpeciesReference
stoichiometry: 1.0
species: 231818

211724
type: SpeciesReference
stoichiometry: 1.0
species: 231565

211712
type: SpeciesReference
stoichiometry: 1.0
species: 231605

211700
type: SpeciesReference
stoichiometry: 1.0
species: 231821

233508
type: Reaction
product: 217765
product: 217789
reversible: false
name: Carbon-dioxide:ammonia ligase
product: 217753
reactant: 217717
product: 217777
fast: false
reactant: 217741
reactant: 217705
reactant: 217729

217765
type: SpeciesReference
stoichiometry: 1.0
species: 231609

217789
type: SpeciesReference
stoichiometry: 2.0
species: 232520

217753
type: SpeciesReference
stoichiometry: 2.0
species: 231605

217717
type: SpeciesReference
stoichiometry: 1.0
species: 231545

217777
type: SpeciesReference
stoichiometry: 1.0
species: 232648

217741
type: SpeciesReference
stoichiometry: 1.0
species: 231570

217705
type: SpeciesReference
stoichiometry: 2.0
species: 231573

217729
type: SpeciesReference
stoichiometry: 1.0
species: 231518

234173
type: Reaction
product: 235225
product: 235213
reactant: 235201
reactant: 235189
fast: false
reversible: true
name: Symport: (pyruvate)

235225
type: SpeciesReference
stoichiometry: 1.0
species: 232520

235213
type: SpeciesReference
stoichiometry: 1.0
species: 232411

235201
type: SpeciesReference
stoichiometry: 1.0
species: 232166

235189
type: SpeciesReference
stoichiometry: 1.0
species: 231733

231733
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Pyruvate (E)

233073
type: Reaction
product: 206562
product: 206550
reactant: 206538
reactant: 206526
fast: false
reversible: false
name: 3-Aminopropanoate:2-oxoglutarate aminotransferase

206562
type: SpeciesReference
stoichiometry: 1.0
species: 232372

206550
type: SpeciesReference
stoichiometry: 1.0
species: 231474

231474
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Oxopropanoate

206538
type: SpeciesReference
stoichiometry: 1.0
species: 232375

206526
type: SpeciesReference
stoichiometry: 1.0
species: 232560

233348
type: Reaction
product: 214600
fast: false
reversible: true
name: Exchange: (L-Isoleucine)

214600
type: SpeciesReference
stoichiometry: 1.0
species: 232282

234040
type: Reaction
product: 230853
product: 230841
reactant: 230829
reactant: 230817
fast: false
reversible: false
name: beta-D-Fructose 1,6-bisphosphate 1-phosphohydrolase

230853
type: SpeciesReference
stoichiometry: 1.0
species: 232504

230841
type: SpeciesReference
stoichiometry: 1.0
species: 231609

230829
type: SpeciesReference
stoichiometry: 1.0
species: 231873

230817
type: SpeciesReference
stoichiometry: 1.0
species: 231570

232847
type: Reaction
product: 200290
product: 200278
reactant: 200266
reactant: 200254
fast: false
reversible: false
name: 3.1.3.-

200290
type: SpeciesReference
stoichiometry: 1.0
species: 231609

200278
type: SpeciesReference
stoichiometry: 1.0
species: 231986

200266
type: SpeciesReference
stoichiometry: 1.0
species: 231570

200254
type: SpeciesReference
stoichiometry: 1.0
species: 232352

233232
type: Reaction
product: 211530
product: 211518
reactant: 211506
reactant: 211494
fast: false
reversible: true
name: Symport: (L-Asparagine:H+)

211530
type: SpeciesReference
stoichiometry: 1.0
species: 232520

211518
type: SpeciesReference
stoichiometry: 1.0
species: 232527

211506
type: SpeciesReference
stoichiometry: 1.0
species: 232166

211494
type: SpeciesReference
stoichiometry: 1.0
species: 231749

232927
type: Reaction
reactant: 202627
reactant: 202652
product: 202677
reactant: 202640
product: 202689
product: 202701
product: 202664
name: 1.14.13.39
reversible: false
fast: false

202627
type: SpeciesReference
stoichiometry: 1.0
species: 232619

202652
type: SpeciesReference
stoichiometry: 1.0
species: 231598

202677
type: SpeciesReference
stoichiometry: 1.0
species: 231758

202640
type: SpeciesReference
stoichiometry: 1.0
species: 231606

202689
type: SpeciesReference
stoichiometry: 1.0
species: 231597

202701
type: SpeciesReference
stoichiometry: 3.0
species: 232520

202664
type: SpeciesReference
stoichiometry: 1.0
species: 231473

232714
type: Reaction
reactant: 196525
product: 196601
product: 196576
product: 196588
reactant: 196538
reactant: 196512
reactant: 196551
name: 6.6.1.1
product: 196564
reversible: true
fast: false

196525
type: SpeciesReference
stoichiometry: 1.0
species: 232211

232211
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Protoporphyrin

196601
type: SpeciesReference
stoichiometry: 3.0
species: 232520

196576
type: SpeciesReference
stoichiometry: 1.0
species: 231609

196588
type: SpeciesReference
stoichiometry: 1.0
species: 232318

232318
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Magnesium protoporphyrin

196538
type: SpeciesReference
stoichiometry: 1.0
species: 231678

196512
type: SpeciesReference
stoichiometry: 1.0
species: 231573

196551
type: SpeciesReference
stoichiometry: 1.0
species: 231570

196564
type: SpeciesReference
stoichiometry: 1.0
species: 231605

233088
type: Reaction
product: 206985
product: 206973
reactant: 206961
reactant: 206949
fast: false
reversible: true
name: L-Valine:2-oxoglutarate aminotransferase

206985
type: SpeciesReference
stoichiometry: 1.0
species: 232372

206973
type: SpeciesReference
stoichiometry: 1.0
species: 232475

206961
type: SpeciesReference
stoichiometry: 1.0
species: 232375

206949
type: SpeciesReference
stoichiometry: 1.0
species: 232254

232899
type: Reaction
product: 201830
product: 201818
reactant: 201806
reactant: 201794
fast: false
reversible: true
name: Acetyl-CoA:acetyl-CoA C-acetyltransferase

201830
type: SpeciesReference
stoichiometry: 1.0
species: 232123

201818
type: SpeciesReference
stoichiometry: 1.0
species: 231517

201806
type: SpeciesReference
stoichiometry: 1.0
species: 231409

201794
type: SpeciesReference
stoichiometry: 1.0
species: 232407

233329
type: Reaction
product: 214202
product: 214190
reactant: 214177
reactant: 214165
fast: false
reversible: false
name: Symport: (Nitrate: H+)

214202
type: SpeciesReference
stoichiometry: 1.0
species: 232520

214190
type: SpeciesReference
stoichiometry: 1.0
species: 231393

214177
type: SpeciesReference
stoichiometry: 1.0
species: 232166

214165
type: SpeciesReference
stoichiometry: 1.0
species: 232099

233716
type: Reaction
product: 223314
product: 223302
product: 223290
reactant: 223278
reactant: 223266
fast: false
reversible: true
name: 1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose-5-phosphate

223314
type: SpeciesReference
stoichiometry: 1.0
species: 231570

223302
type: SpeciesReference
stoichiometry: 1.0
species: 231518

223290
type: SpeciesReference
stoichiometry: 1.0
species: 232391

223278
type: SpeciesReference
stoichiometry: 1.0
species: 232520

223266
type: SpeciesReference
stoichiometry: 1.0
species: 232230

231901
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Serine (E)

233581
type: Reaction
product: 219893
product: 219881
reactant: 219869
reactant: 219857
fast: false
reversible: true
name: Myristoyl-CoA:acetylCoA C-myristoyltransferase

219893
type: SpeciesReference
stoichiometry: 1.0
species: 232102

232102
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Oxopalmitoyl-CoA

219881
type: SpeciesReference
stoichiometry: 1.0
species: 231517

219869
type: SpeciesReference
stoichiometry: 1.0
species: 232407

219857
type: SpeciesReference
stoichiometry: 1.0
species: 231541

233201
type: Reaction
product: 210667
product: 210655
reactant: 210643
reactant: 210631
fast: false
reversible: true
name: Symport: (L-Leucine:H+)

210667
type: SpeciesReference
stoichiometry: 1.0
species: 232520

210655
type: SpeciesReference
stoichiometry: 1.0
species: 231502

210643
type: SpeciesReference
stoichiometry: 1.0
species: 232166

210631
type: SpeciesReference
stoichiometry: 1.0
species: 231706

231706
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Leucine (E)

233345
type: Reaction
product: 214588
fast: false
reversible: true
name: Exchange: (L-Asparagine)

214588
type: SpeciesReference
stoichiometry: 1.0
species: 231749

233053
type: Reaction
product: 205909
product: 205897
reactant: 205884
reactant: 205872
fast: false
reversible: false
name: Cytidine-5'-monophosphate phosphohydrolase

205909
type: SpeciesReference
stoichiometry: 1.0
species: 231609

205897
type: SpeciesReference
stoichiometry: 1.0
species: 231965

205884
type: SpeciesReference
stoichiometry: 1.0
species: 231570

205872
type: SpeciesReference
stoichiometry: 1.0
species: 232351

233212
type: Reaction
product: 210972
product: 210960
reactant: 210948
reactant: 210936
fast: false
reversible: true
name: Symport: (Alanine:H+)

210972
type: SpeciesReference
stoichiometry: 1.0
species: 232520

210960
type: SpeciesReference
stoichiometry: 1.0
species: 232291

210948
type: SpeciesReference
stoichiometry: 1.0
species: 232166

210936
type: SpeciesReference
stoichiometry: 1.0
species: 231982

233556
type: Reaction
product: 219202
product: 219189
reactant: 219177
reactant: 219165
reactant: 219153
fast: false
reversible: false
name: 2.4.2.4

219202
type: SpeciesReference
stoichiometry: 1.0
species: 231838

231838
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Deoxy-ribose 1-phosphate

219189
type: SpeciesReference
stoichiometry: 1.0
species: 231361

219177
type: SpeciesReference
stoichiometry: 2.0
species: 232520

219165
type: SpeciesReference
stoichiometry: 1.0
species: 231609

219153
type: SpeciesReference
stoichiometry: 1.0
species: 231434

232924
type: Reaction
product: 202615
product: 202603
product: 202591
reactant: 202579
reactant: 202567
fast: false
reversible: false
name: 1.8.1.4

202615
type: SpeciesReference
stoichiometry: 1.0
species: 232520

202603
type: SpeciesReference
stoichiometry: 1.0
species: 231589

202591
type: SpeciesReference
stoichiometry: 1.0
species: 232400

202579
type: SpeciesReference
stoichiometry: 1.0
species: 231593

202567
type: SpeciesReference
stoichiometry: 1.0
species: 232174

233905
type: Reaction
product: 227725
reactant: 227676
reactant: 227664
reversible: true
product: 227737
fast: false
product: 227700
name: 1-(5-Phosphoribosyl)-5-amino-4-carboxyimidazole:L-aspartate ligase
reactant: 227688
product: 227713

227725
type: SpeciesReference
stoichiometry: 1.0
species: 232057

227676
type: SpeciesReference
stoichiometry: 1.0
species: 231881

227664
type: SpeciesReference
stoichiometry: 1.0
species: 231573

227737
type: SpeciesReference
stoichiometry: 1.0
species: 232520

227700
type: SpeciesReference
stoichiometry: 1.0
species: 231605

227688
type: SpeciesReference
stoichiometry: 1.0
species: 232243

227713
type: SpeciesReference
stoichiometry: 1.0
species: 231609

233292
type: Reaction
product: 213190
reactant: 213178
fast: false
reversible: false
name: Influx Diffusion: (Na+)

213190
type: SpeciesReference
stoichiometry: 1.0
species: 232041

213178
type: SpeciesReference
stoichiometry: 1.0
species: 232062

233068
type: Reaction
product: 206369
product: 206357
reactant: 206345
reactant: 206333
fast: false
reversible: false
name: Nicotinate D-ribonucleotide phosphohydrolase

206369
type: SpeciesReference
stoichiometry: 1.0
species: 231609

206357
type: SpeciesReference
stoichiometry: 1.0
species: 232302

232302
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Nicotinate D-ribonucleoside

206345
type: SpeciesReference
stoichiometry: 1.0
species: 231570

206333
type: SpeciesReference
stoichiometry: 1.0
species: 232111

234128
type: Reaction
product: 233742
reactant: 233730
fast: false
reversible: false
name: Excretion: (Glycoaldehyde)

233742
type: SpeciesReference
stoichiometry: 1.0
species: 232187

233730
type: SpeciesReference
stoichiometry: 1.0
species: 232603

234240
type: Reaction
product: 236954
product: 236942
reactant: 236930
reactant: 236918
fast: false
reversible: true
name: 2.6.1.42

236954
type: SpeciesReference
stoichiometry: 1.0
species: 232372

236942
type: SpeciesReference
stoichiometry: 1.0
species: 231374

236930
type: SpeciesReference
stoichiometry: 1.0
species: 232375

236918
type: SpeciesReference
stoichiometry: 1.0
species: 231506

232770
type: Reaction
product: 198143
product: 198131
reactant: 198119
reactant: 198107
fast: false
reversible: true
name: 2.1.1.131

198143
type: SpeciesReference
stoichiometry: 1.0
species: 232412

198131
type: SpeciesReference
stoichiometry: 1.0
species: 231753

198119
type: SpeciesReference
stoichiometry: 1.0
species: 231549

198107
type: SpeciesReference
stoichiometry: 1.0
species: 231786

233989
type: Reaction
product: 229603
product: 229591
product: 229579
reactant: 229567
reactant: 229555
fast: false
reversible: false
name: Molybdopterin biosynthesis

229603
type: SpeciesReference
stoichiometry: 1.0
species: 232520

229591
type: SpeciesReference
stoichiometry: 1.0
species: 231513

229579
type: SpeciesReference
stoichiometry: 1.0
species: 232223

229567
type: SpeciesReference
stoichiometry: 1.0
species: 231570

229555
type: SpeciesReference
stoichiometry: 1.0
species: 232283

233396
type: Reaction
product: 215734
fast: false
reversible: true
name: Exchange: (L-Proline)

215734
type: SpeciesReference
stoichiometry: 1.0
species: 231785

234096
type: Reaction
product: 232474
product: 232462
reactant: 232450
reactant: 232438
reactant: 232426
fast: false
reversible: true
name: L-Histidinal:NAD+ oxidoreductase

232474
type: SpeciesReference
stoichiometry: 2.0
species: 231589

232462
type: SpeciesReference
stoichiometry: 1.0
species: 231410

232450
type: SpeciesReference
stoichiometry: 2.0
species: 231593

232438
type: SpeciesReference
stoichiometry: 1.0
species: 231570

232426
type: SpeciesReference
stoichiometry: 1.0
species: 232021

232021
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Histidinal

233300
type: Reaction
product: 213358
reactant: 213346
fast: false
reversible: false
name: Excretion: (L-Ornithine)

213358
type: SpeciesReference
stoichiometry: 1.0
species: 231833

213346
type: SpeciesReference
stoichiometry: 1.0
species: 232676

233152
type: Reaction
product: 209259
product: 209247
product: 209235
reactant: 209222
fast: false
reversible: true
name: -

209259
type: SpeciesReference
stoichiometry: 1.0
species: 232520

209247
type: SpeciesReference
stoichiometry: 1.0
species: 231570

209235
type: SpeciesReference
stoichiometry: 1.0
species: 231757

209222
type: SpeciesReference
stoichiometry: 1.0
species: 232202

234205
type: Reaction
product: 236033
product: 236021
product: 236009
reactant: 235996
reactant: 235984
fast: false
reversible: false
name: ATP:(R)-glycerate 3-phosphotransferase

236033
type: SpeciesReference
stoichiometry: 1.0
species: 232520

236021
type: SpeciesReference
stoichiometry: 1.0
species: 232323

236009
type: SpeciesReference
stoichiometry: 1.0
species: 231605

235996
type: SpeciesReference
stoichiometry: 1.0
species: 231322

231322
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Glycerate

235984
type: SpeciesReference
stoichiometry: 1.0
species: 231573

234061
type: Reaction
product: 231943
reactant: 231772
fast: false
reversible: true
name: 5.1.3.6

231943
type: SpeciesReference
stoichiometry: 1.0
species: 231590

231772
type: SpeciesReference
stoichiometry: 1.0
species: 232579

232094
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Arginyl-tRNA(Arg)

233625
type: Reaction
product: 221095
product: 221083
product: 221071
reactant: 221059
reactant: 221047
fast: false
reversible: true
name: Dihydrofolate:NADP+ oxidoreductase

221095
type: SpeciesReference
stoichiometry: 1.0
species: 232520

221083
type: SpeciesReference
stoichiometry: 1.0
species: 231598

221071
type: SpeciesReference
stoichiometry: 1.0
species: 231334

221059
type: SpeciesReference
stoichiometry: 1.0
species: 231597

221047
type: SpeciesReference
stoichiometry: 1.0
species: 231581

233317
type: Reaction
product: 213780
reactant: 213744
product: 213792
reactant: 213756
name: ABC-T: (Thiamin)
product: 213816
fast: false
product: 213804
reversible: false
reactant: 213768

213780
type: SpeciesReference
stoichiometry: 1.0
species: 231986

213744
type: SpeciesReference
stoichiometry: 1.0
species: 232231

213792
type: SpeciesReference
stoichiometry: 1.0
species: 231605

213756
type: SpeciesReference
stoichiometry: 1.0
species: 231573

213816
type: SpeciesReference
stoichiometry: 1.0
species: 232520

213804
type: SpeciesReference
stoichiometry: 1.0
species: 231609

213768
type: SpeciesReference
stoichiometry: 1.0
species: 231570

233957
type: Reaction
name: ABC-T: (Molybdenum)
reversible: false
reactant: 228619
reactant: 228643
product: 228692
product: 228667
reactant: 228631
product: 228679
fast: false
product: 228655

228619
type: SpeciesReference
stoichiometry: 1.0
species: 231750

231750
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Molybdenum (E)

228643
type: SpeciesReference
stoichiometry: 1.0
species: 231570

228692
type: SpeciesReference
stoichiometry: 1.0
species: 232520

228667
type: SpeciesReference
stoichiometry: 1.0
species: 231605

228631
type: SpeciesReference
stoichiometry: 1.0
species: 231573

228679
type: SpeciesReference
stoichiometry: 1.0
species: 231609

228655
type: SpeciesReference
stoichiometry: 1.0
species: 232523

233368
type: Reaction
product: 215021
product: 215009
product: 214997
reactant: 214985
fast: false
reversible: false
name: Geranylgeranyl-diphosphate:geranylgeranyl-diphosphate

215021
type: SpeciesReference
stoichiometry: 1.0
species: 232520

215009
type: SpeciesReference
stoichiometry: 1.0
species: 231602

214997
type: SpeciesReference
stoichiometry: 1.0
species: 231513

214985
type: SpeciesReference
stoichiometry: 2.0
species: 231877

232863
type: Reaction
product: 200719
reactant: 200707
reactant: 200695
fast: false
reversible: false
name: (R)-S-Lactoylglutathione methylglyoxal-lyase (isomerizing)

200719
type: SpeciesReference
stoichiometry: 1.0
species: 231330

200707
type: SpeciesReference
stoichiometry: 1.0
species: 231813

200695
type: SpeciesReference
stoichiometry: 1.0
species: 232363

232767
type: Reaction
product: 198095
reactant: 198083
reactant: 198071
fast: false
reversible: false
name: LeuC/D

198095
type: SpeciesReference
stoichiometry: 1.0
species: 232290

198083
type: SpeciesReference
stoichiometry: 1.0
species: 231570

198071
type: SpeciesReference
stoichiometry: 1.0
species: 232487

232238
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Tyrosyl-tRNA(Tyr)

233985
type: Reaction
product: 229459
fast: false
reversible: false
name: ABC-T: (Hexadecanoic acid)
product: 229471
reactant: 229411
reactant: 229423
reactant: 229399
product: 229447
product: 229435

229459
type: SpeciesReference
stoichiometry: 1.0
species: 231609

229471
type: SpeciesReference
stoichiometry: 1.0
species: 232520

229411
type: SpeciesReference
stoichiometry: 1.0
species: 231573

229423
type: SpeciesReference
stoichiometry: 1.0
species: 231570

229399
type: SpeciesReference
stoichiometry: 1.0
species: 232103

232103
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Hexadecanoic acid (E)

229447
type: SpeciesReference
stoichiometry: 1.0
species: 231605

229435
type: SpeciesReference
stoichiometry: 1.0
species: 231381

233732
type: Reaction
product: 223698
product: 223686
product: 223674
reactant: 223662
reactant: 223650
fast: false
reversible: true
name: 2.7.1.156

223698
type: SpeciesReference
stoichiometry: 1.0
species: 232520

223686
type: SpeciesReference
stoichiometry: 1.0
species: 232467

223674
type: SpeciesReference
stoichiometry: 1.0
species: 231553

223662
type: SpeciesReference
stoichiometry: 1.0
species: 232283

223650
type: SpeciesReference
stoichiometry: 1.0
species: 231554

233617
type: Reaction
product: 220878
product: 220866
reactant: 220854
fast: false
reversible: true
name: N-(L-Argininosuccinate) arginie-lyase

220878
type: SpeciesReference
stoichiometry: 1.0
species: 232619

220866
type: SpeciesReference
stoichiometry: 1.0
species: 231501

220854
type: SpeciesReference
stoichiometry: 1.0
species: 232371

232719
type: Reaction
product: 196745
reactant: 196733
reactant: 196721
fast: false
reversible: true
name: Indole hydro-lyase (adding indoleglycerol-phosphate)

196745
type: SpeciesReference
stoichiometry: 1.0
species: 232391

196733
type: SpeciesReference
stoichiometry: 1.0
species: 231313

196721
type: SpeciesReference
stoichiometry: 1.0
species: 231918

233124
type: Reaction
product: 208386
product: 208374
product: 208362
reactant: 208350
reactant: 208338
fast: false
reversible: false
name: ATP:NAD+ 2'-phosphotransferase

208386
type: SpeciesReference
stoichiometry: 1.0
species: 232520

208374
type: SpeciesReference
stoichiometry: 1.0
species: 231597

208362
type: SpeciesReference
stoichiometry: 1.0
species: 231605

208350
type: SpeciesReference
stoichiometry: 1.0
species: 231593

208338
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233149
type: Reaction
reactant: 209162
product: 209198
name: (R)-4'-Phosphopantothenate:L-cysteine ligase
fast: false
reversible: false
reactant: 209138
product: 209210
product: 209174
reactant: 209150
product: 209186

209162
type: SpeciesReference
stoichiometry: 1.0
species: 232567

209198
type: SpeciesReference
stoichiometry: 1.0
species: 231854

209138
type: SpeciesReference
stoichiometry: 1.0
species: 232608

209210
type: SpeciesReference
stoichiometry: 1.0
species: 232520

209174
type: SpeciesReference
stoichiometry: 1.0
species: 231350

209150
type: SpeciesReference
stoichiometry: 1.0
species: 231849

209186
type: SpeciesReference
stoichiometry: 1.0
species: 231609

232836
type: Reaction
product: 199990
product: 199978
reactant: 199966
reactant: 199954
fast: false
reversible: true
name: ATP:nucleoside-diphosphate phosphatransferase

199990
type: SpeciesReference
stoichiometry: 1.0
species: 232488

199978
type: SpeciesReference
stoichiometry: 1.0
species: 231605

199966
type: SpeciesReference
stoichiometry: 1.0
species: 231930

199954
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233221
type: Reaction
product: 211262
product: 211250
reactant: 211238
reactant: 211226
fast: false
reversible: false
name: ATP:FMN adenylyltransferase

211262
type: SpeciesReference
stoichiometry: 1.0
species: 231538

211250
type: SpeciesReference
stoichiometry: 1.0
species: 231513

211238
type: SpeciesReference
stoichiometry: 1.0
species: 232616

211226
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232956
type: Reaction
product: 203616
product: 203604
reactant: 203592
fast: false
reversible: true
name: (S)-3-Hydroxybutanoyl-CoA hydro-lyase

203616
type: SpeciesReference
stoichiometry: 1.0
species: 231570

203604
type: SpeciesReference
stoichiometry: 1.0
species: 232259

203592
type: SpeciesReference
stoichiometry: 1.0
species: 232029

233944
type: Reaction
product: 228327
fast: false
reversible: true
name: Exchange: (Cadmium)

228327
type: SpeciesReference
stoichiometry: 1.0
species: 232551

232703
type: Reaction
product: 196314
product: 196302
reactant: 196290
reactant: 196278
fast: false
reversible: true
name: N-Succinyl-LL-2,6-diaminoheptanedioate amidohydrolase

196314
type: SpeciesReference
stoichiometry: 1.0
species: 231922

196302
type: SpeciesReference
stoichiometry: 1.0
species: 232287

196290
type: SpeciesReference
stoichiometry: 1.0
species: 231570

196278
type: SpeciesReference
stoichiometry: 1.0
species: 231461

234177
type: Reaction
product: 235334
product: 235322
product: 235310
reactant: 235298
reactant: 235286
fast: false
reversible: false
name: Acetyl-CoA:L-glutamate N-acetyltransferase

235334
type: SpeciesReference
stoichiometry: 1.0
species: 232520

235322
type: SpeciesReference
stoichiometry: 1.0
species: 231442

235310
type: SpeciesReference
stoichiometry: 1.0
species: 231517

235298
type: SpeciesReference
stoichiometry: 1.0
species: 232372

235286
type: SpeciesReference
stoichiometry: 1.0
species: 232407

233576
type: Reaction
product: 219711
product: 219699
reactant: 219687
reactant: 219675
reactant: 219663
fast: false
reversible: false
name: O3-Acetyl-L-serine acetate-lyase (adding hydrogen sulfide)

219711
type: SpeciesReference
stoichiometry: 1.0
species: 232463

219699
type: SpeciesReference
stoichiometry: 1.0
species: 232567

219687
type: SpeciesReference
stoichiometry: 1.0
species: 232520

219675
type: SpeciesReference
stoichiometry: 1.0
species: 232492

219663
type: SpeciesReference
stoichiometry: 1.0
species: 232278

233696
type: Reaction
product: 222783
product: 222771
reactant: 222759
reactant: 222747
reactant: 222734
fast: false
reversible: true
name: L-Serine hydro-lyase (adding indoleglycerol-phosphate)

222783
type: SpeciesReference
stoichiometry: 1.0
species: 231570

222771
type: SpeciesReference
stoichiometry: 1.0
species: 232679

222759
type: SpeciesReference
stoichiometry: 1.0
species: 232520

222747
type: SpeciesReference
stoichiometry: 1.0
species: 231918

222734
type: SpeciesReference
stoichiometry: 1.0
species: 232624

233705
type: Reaction
product: 223074
product: 223062
product: 223050
reactant: 223038
reactant: 223026
fast: false
reversible: false
name: GTP:pyruvate O2-phosphotransferase

223074
type: SpeciesReference
stoichiometry: 1.0
species: 232520

223062
type: SpeciesReference
stoichiometry: 1.0
species: 232671

223050
type: SpeciesReference
stoichiometry: 1.0
species: 232467

223038
type: SpeciesReference
stoichiometry: 1.0
species: 232411

223026
type: SpeciesReference
stoichiometry: 1.0
species: 232283

234044
type: Reaction
product: 230961
product: 230949
product: 230937
reactant: 230925
reactant: 230913
fast: false
reversible: true
name: Prephenate hydro-lyase (decarboxylating)

230961
type: SpeciesReference
stoichiometry: 1.0
species: 231518

230949
type: SpeciesReference
stoichiometry: 1.0
species: 231570

230937
type: SpeciesReference
stoichiometry: 1.0
species: 232584

230925
type: SpeciesReference
stoichiometry: 1.0
species: 232520

230913
type: SpeciesReference
stoichiometry: 1.0
species: 231338

233825
type: Reaction
product: 226022
product: 226010
reactant: 225998
reactant: 225986
fast: false
reversible: false
name: Symport: (Pantothenate:Na+)

226022
type: SpeciesReference
stoichiometry: 1.0
species: 232041

226010
type: SpeciesReference
stoichiometry: 1.0
species: 232315

225998
type: SpeciesReference
stoichiometry: 1.0
species: 232155

225986
type: SpeciesReference
stoichiometry: 1.0
species: 231677

234148
type: Reaction
product: 234607
reactant: 234595
reactant: 234583
fast: false
reversible: false
name: 3.6.1.1

234607
type: SpeciesReference
stoichiometry: 2.0
species: 231609

234595
type: SpeciesReference
stoichiometry: 1.0
species: 231570

234583
type: SpeciesReference
stoichiometry: 1.0
species: 231513

233953
type: Reaction
product: 228557
product: 228545
product: 228533
reactant: 228521
reactant: 228509
fast: false
reversible: false
name: Gal Synth Gap

228557
type: SpeciesReference
stoichiometry: 1.0
species: 232520

228545
type: SpeciesReference
stoichiometry: 1.0
species: 231542

228533
type: SpeciesReference
stoichiometry: 1.0
species: 231454

228521
type: SpeciesReference
stoichiometry: 1.0
species: 231570

228509
type: SpeciesReference
stoichiometry: 1.0
species: 232367

234157
type: Reaction
product: 234791
product: 234778
reactant: 234766
reactant: 234754
fast: false
reversible: true
name: Guanosine:orthophosphate ribosyltransferase

234791
type: SpeciesReference
stoichiometry: 1.0
species: 231450

234778
type: SpeciesReference
stoichiometry: 1.0
species: 231390

234766
type: SpeciesReference
stoichiometry: 1.0
species: 231609

234754
type: SpeciesReference
stoichiometry: 1.0
species: 232033

232782
type: Reaction
product: 198435
reactant: 198423
reactant: 198411
fast: false
reversible: true
name: Creatinine amidohydrolase

198435
type: SpeciesReference
stoichiometry: 1.0
species: 231690

198423
type: SpeciesReference
stoichiometry: 1.0
species: 231570

198411
type: SpeciesReference
stoichiometry: 1.0
species: 232151

234196
type: Reaction
product: 235815
product: 235803
reactant: 235791
reactant: 235779
fast: false
reversible: true
name: D-Glucono-1,5-lactone lactonohydrolase

235815
type: SpeciesReference
stoichiometry: 1.0
species: 232520

235803
type: SpeciesReference
stoichiometry: 1.0
species: 231325

235791
type: SpeciesReference
stoichiometry: 1.0
species: 231570

235779
type: SpeciesReference
stoichiometry: 1.0
species: 232327

233577
type: Reaction
product: 219784
reactant: 219748
fast: false
product: 219796
reactant: 219736
product: 219772
reversible: false
name: (R)-Pantoate:beta-alanine ligase (AMP-forming)
reactant: 219724
product: 219760

219784
type: SpeciesReference
stoichiometry: 1.0
species: 232315

219748
type: SpeciesReference
stoichiometry: 1.0
species: 232560

219796
type: SpeciesReference
stoichiometry: 2.0
species: 232520

219736
type: SpeciesReference
stoichiometry: 1.0
species: 231430

219772
type: SpeciesReference
stoichiometry: 1.0
species: 231513

219724
type: SpeciesReference
stoichiometry: 1.0
species: 231573

219760
type: SpeciesReference
stoichiometry: 1.0
species: 232396

234149
type: Reaction
product: 234631
reactant: 234619
fast: false
reversible: false
name: pmf leak: (H+)

234631
type: SpeciesReference
stoichiometry: 1.0
species: 232042

234619
type: SpeciesReference
stoichiometry: 1.0
species: 232166

233444
type: Reaction
product: 216511
product: 216499
reactant: 216487
reactant: 216475
fast: false
reversible: false
name: 4.1.1.25

216511
type: SpeciesReference
stoichiometry: 1.0
species: 231518

216499
type: SpeciesReference
stoichiometry: 1.0
species: 231805

231805
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Tyramine

216487
type: SpeciesReference
stoichiometry: 1.0
species: 232520

216475
type: SpeciesReference
stoichiometry: 1.0
species: 232516

231405
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 6,7-Dimethyl-8-(1-D-ribityl)lumazine

233049
type: Reaction
reactant: 205752
fast: false
product: 205776
product: 205788
name: 6.1.1.19
product: 205812
product: 205800
reversible: false
reactant: 205764
reactant: 205740

205752
type: SpeciesReference
stoichiometry: 1.0
species: 232619

205776
type: SpeciesReference
stoichiometry: 1.0
species: 232396

205788
type: SpeciesReference
stoichiometry: 1.0
species: 231513

205812
type: SpeciesReference
stoichiometry: 1.0
species: 232520

205800
type: SpeciesReference
stoichiometry: 1.0
species: 232094

205764
type: SpeciesReference
stoichiometry: 1.0
species: 232695

232695
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Arg)

205740
type: SpeciesReference
stoichiometry: 1.0
species: 231573

234016
type: Reaction
product: 230270
product: 230258
product: 230246
reactant: 230234
reactant: 230222
fast: false
reversible: false
name: O-Acetyl-L-homoserine succinate-lyase (adding cysteine)

230270
type: SpeciesReference
stoichiometry: 1.0
species: 232520

230258
type: SpeciesReference
stoichiometry: 1.0
species: 232463

230246
type: SpeciesReference
stoichiometry: 1.0
species: 232215

230234
type: SpeciesReference
stoichiometry: 1.0
species: 232567

230222
type: SpeciesReference
stoichiometry: 1.0
species: 232271

233892
type: Reaction
product: 227363
product: 227350
product: 227338
reactant: 227326
reactant: 227314
fast: false
reversible: true
name: (S)-3-Hydroxyhexadecanoyl-CoA:NAD+ oxidoreductase

227363
type: SpeciesReference
stoichiometry: 1.0
species: 232520

227350
type: SpeciesReference
stoichiometry: 1.0
species: 231589

227338
type: SpeciesReference
stoichiometry: 1.0
species: 232102

227326
type: SpeciesReference
stoichiometry: 1.0
species: 231593

227314
type: SpeciesReference
stoichiometry: 1.0
species: 232098

232098
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (S)-3-Hydroxyhexadecanoyl-CoA

232819
type: Reaction
product: 199508
product: 199495
reactant: 199483
reactant: 199471
fast: false
reversible: true
name: Inosine:orthophosphate ribosyltransferase

199508
type: SpeciesReference
stoichiometry: 1.0
species: 231450

199495
type: SpeciesReference
stoichiometry: 1.0
species: 232600

199483
type: SpeciesReference
stoichiometry: 1.0
species: 231609

199471
type: SpeciesReference
stoichiometry: 1.0
species: 232556

231801
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Arsenite

232883
type: Reaction
product: 201299
product: 201287
reactant: 201275
reactant: 201263
reactant: 201251
fast: false
reversible: true
name: 5-Amino-2-oxopentanoate:2-oxoglutarate aminotransferase

201299
type: SpeciesReference
stoichiometry: 1.0
species: 232372

201287
type: SpeciesReference
stoichiometry: 1.0
species: 231845

201275
type: SpeciesReference
stoichiometry: 1.0
species: 232520

201263
type: SpeciesReference
stoichiometry: 1.0
species: 232375

201251
type: SpeciesReference
stoichiometry: 1.0
species: 231829

231829
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Histidinol phosphate

233529
type: Reaction
product: 218465
reactant: 218405
product: 218453
reversible: false
product: 218441
fast: false
name: ATP:carbamate phosphotransferase
reactant: 218417
reactant: 218429

218465
type: SpeciesReference
stoichiometry: 1.0
species: 231518

218405
type: SpeciesReference
stoichiometry: 1.0
species: 231605

218453
type: SpeciesReference
stoichiometry: 1.0
species: 231545

218441
type: SpeciesReference
stoichiometry: 1.0
species: 231573

218417
type: SpeciesReference
stoichiometry: 1.0
species: 232648

218429
type: SpeciesReference
stoichiometry: 1.0
species: 232520

233056
type: Reaction
product: 205969
product: 205957
product: 205945
reactant: 205933
reactant: 205921
fast: false
reversible: true
name: Geranylgeranyl diphosphate:sn-3-O-(geranylgeranyl)glycerol

205969
type: SpeciesReference
stoichiometry: 1.0
species: 232520

205957
type: SpeciesReference
stoichiometry: 1.0
species: 231414

231414
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2,3-Bis-O-(geranylgeranyl)glycerol 1-phosphate

205945
type: SpeciesReference
stoichiometry: 1.0
species: 231513

205933
type: SpeciesReference
stoichiometry: 1.0
species: 231658

205921
type: SpeciesReference
stoichiometry: 1.0
species: 231877

232628
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Leu)

232379
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Squalene

232750
type: Reaction
reactant: 197626
reactant: 197614
product: 197662
product: 197674
fast: false
product: 197638
reversible: false
product: 197650
name: 2.5.1.-

197626
type: SpeciesReference
stoichiometry: 1.0
species: 232388

232388
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: all-trans-Octaprenyl diphosphate

197614
type: SpeciesReference
stoichiometry: 1.0
species: 231333

231333
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 1,4-Dihydroxy-2-naphthoate

197662
type: SpeciesReference
stoichiometry: 1.0
species: 231518

197674
type: SpeciesReference
stoichiometry: 2.0
species: 232520

197638
type: SpeciesReference
stoichiometry: 1.0
species: 231638

197650
type: SpeciesReference
stoichiometry: 1.0
species: 231513

233173
type: Reaction
product: 209891
product: 209879
reactant: 209867
reactant: 209854
fast: false
reversible: false
name: O-Acetyl-L-homoserine acetate-lyase (adding methanethiol)

209891
type: SpeciesReference
stoichiometry: 1.0
species: 232463

209879
type: SpeciesReference
stoichiometry: 1.0
species: 232539

209867
type: SpeciesReference
stoichiometry: 1.0
species: 232492

209854
type: SpeciesReference
stoichiometry: 1.0
species: 232271

233752
type: Reaction
product: 224146
product: 224134
reactant: 224122
reactant: 224109
fast: false
reversible: false
name: Octanoyl-CoA:oxygen 2-oxidoreductase

224146
type: SpeciesReference
stoichiometry: 1.0
species: 231914

224134
type: SpeciesReference
stoichiometry: 1.0
species: 231697

224122
type: SpeciesReference
stoichiometry: 1.0
species: 231538

224109
type: SpeciesReference
stoichiometry: 1.0
species: 232050

232383
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 4-amino-4-deoxychorismate

233040
type: Reaction
product: 205571
fast: false
reversible: true
name: Exchange: (Oxalate)

205571
type: SpeciesReference
stoichiometry: 1.0
species: 232242

233872
type: Reaction
product: 227025
product: 227013
reactant: 227000
reactant: 226988
fast: false
reversible: true
name: Decanoyl-CoA:acetyl-CoA C-acyltransferase

227025
type: SpeciesReference
stoichiometry: 1.0
species: 232142

227013
type: SpeciesReference
stoichiometry: 1.0
species: 231517

227000
type: SpeciesReference
stoichiometry: 1.0
species: 232407

226988
type: SpeciesReference
stoichiometry: 1.0
species: 231702

233477
type: Reaction
product: 217100
fast: false
reversible: true
name: Exchange: (L-Leucine)

217100
type: SpeciesReference
stoichiometry: 1.0
species: 231706

233524
type: Reaction
product: 218261
reactant: 218249
fast: false
reversible: false
name: Diffusion: (Formate)

218261
type: SpeciesReference
stoichiometry: 1.0
species: 231929

218249
type: SpeciesReference
stoichiometry: 1.0
species: 232307

233268
type: Reaction
product: 212506
product: 212494
reactant: 212482
reactant: 212470
fast: false
reversible: false
name: Orotidine-5'-phosphate carboxy-lyase

212506
type: SpeciesReference
stoichiometry: 1.0
species: 231518

212494
type: SpeciesReference
stoichiometry: 1.0
species: 231370

212482
type: SpeciesReference
stoichiometry: 1.0
species: 232520

212470
type: SpeciesReference
stoichiometry: 1.0
species: 231825

231825
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Orotidine 5'-phosphate

232884
type: Reaction
product: 201359
product: 201347
reactant: 201335
reactant: 201323
reactant: 201311
fast: false
reversible: true
name: L-Serine:pyruvate aminotransferase

201359
type: SpeciesReference
stoichiometry: 1.0
species: 232291

201347
type: SpeciesReference
stoichiometry: 1.0
species: 232640

232640
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Hydroxypyruvate

201335
type: SpeciesReference
stoichiometry: 1.0
species: 232520

201323
type: SpeciesReference
stoichiometry: 1.0
species: 232411

201311
type: SpeciesReference
stoichiometry: 1.0
species: 232624

232691
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Ala)

233761
type: Reaction
product: 224362
product: 224350
reactant: 224338
reactant: 224326
fast: false
reversible: false
name: 2-Methylbutanoyl-CoA:(acceptor) 2,3-oxidoreductase

224362
type: SpeciesReference
stoichiometry: 1.0
species: 231914

224350
type: SpeciesReference
stoichiometry: 1.0
species: 231950

231950
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Methylbut-2-enoyl-CoA

224338
type: SpeciesReference
stoichiometry: 1.0
species: 231538

224326
type: SpeciesReference
stoichiometry: 1.0
species: 232087

234176
type: Reaction
product: 235273
product: 235261
reactant: 235249
reactant: 235237
fast: false
reversible: false
name: 6,7-Dimethyl-8-(1-D-ribityl)lumazine:6,7-dimethyl-8-(1-D-ribityl)

235273
type: SpeciesReference
stoichiometry: 1.0
species: 232053

235261
type: SpeciesReference
stoichiometry: 1.0
species: 231341

235249
type: SpeciesReference
stoichiometry: 1.0
species: 232520

235237
type: SpeciesReference
stoichiometry: 2.0
species: 231405

232751
type: Reaction
product: 197734
product: 197722
product: 197710
reactant: 197698
reactant: 197686
fast: false
reversible: false
name: 2.5.1.30

197734
type: SpeciesReference
stoichiometry: 1.0
species: 232520

197722
type: SpeciesReference
stoichiometry: 1.0
species: 231513

197710
type: SpeciesReference
stoichiometry: 1.0
species: 232070

197698
type: SpeciesReference
stoichiometry: 1.0
species: 231458

197686
type: SpeciesReference
stoichiometry: 1.0
species: 231989

231989
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: all-trans-Hexaprenyl diphosphate

233081
type: Reaction
product: 206780
reactant: 206720
reactant: 206756
fast: false
product: 206804
name: glycine synthase
reactant: 206732
reactant: 206768
reversible: true
product: 206792
reactant: 206744

206780
type: SpeciesReference
stoichiometry: 1.0
species: 232420

206720
type: SpeciesReference
stoichiometry: 1.0
species: 232479

206756
type: SpeciesReference
stoichiometry: 1.0
species: 231589

206804
type: SpeciesReference
stoichiometry: 1.0
species: 231593

206732
type: SpeciesReference
stoichiometry: 1.0
species: 231545

206768
type: SpeciesReference
stoichiometry: 1.0
species: 232520

206792
type: SpeciesReference
stoichiometry: 1.0
species: 231397

206744
type: SpeciesReference
stoichiometry: 1.0
species: 231518

233233
type: Reaction
product: 211578
product: 211566
reactant: 211554
reactant: 211542
fast: false
reversible: true
name: Symport: (L-Phenylalanine:H+)

211578
type: SpeciesReference
stoichiometry: 1.0
species: 232520

211566
type: SpeciesReference
stoichiometry: 1.0
species: 232683

211554
type: SpeciesReference
stoichiometry: 1.0
species: 232166

211542
type: SpeciesReference
stoichiometry: 1.0
species: 231826

232945
type: Reaction
product: 203339
product: 203327
reactant: 203315
reactant: 203303
fast: false
reversible: false
name: N-[(R)-4'-Phosphopantothenoyl]-L-cysteine carboxy-lyase

203339
type: SpeciesReference
stoichiometry: 1.0
species: 231518

203327
type: SpeciesReference
stoichiometry: 1.0
species: 232014

203315
type: SpeciesReference
stoichiometry: 1.0
species: 232520

203303
type: SpeciesReference
stoichiometry: 1.0
species: 231854

234160
type: Reaction
product: 234839
product: 234827
reactant: 234815
reactant: 234803
fast: false
reversible: true
name: Symport: (Malate:H+)

234839
type: SpeciesReference
stoichiometry: 1.0
species: 232520

234827
type: SpeciesReference
stoichiometry: 1.0
species: 232515

234815
type: SpeciesReference
stoichiometry: 1.0
species: 232166

234803
type: SpeciesReference
stoichiometry: 1.0
species: 231781

234064
type: Reaction
product: 231967
reactant: 231955
fast: false
reversible: true
name: Channel: (Betaine)

231967
type: SpeciesReference
stoichiometry: 1.0
species: 232596

232596
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Betaine

231955
type: SpeciesReference
stoichiometry: 1.0
species: 232006

233525
type: Reaction
reactant: 218297
reactant: 218273
product: 218345
fast: false
product: 218321
reversible: false
product: 218309
name: ABC-T: (D-Galactose)
product: 218333
reactant: 218285

218297
type: SpeciesReference
stoichiometry: 1.0
species: 231570

218273
type: SpeciesReference
stoichiometry: 1.0
species: 231710

218345
type: SpeciesReference
stoichiometry: 1.0
species: 231609

218321
type: SpeciesReference
stoichiometry: 1.0
species: 231605

218309
type: SpeciesReference
stoichiometry: 1.0
species: 231454

218333
type: SpeciesReference
stoichiometry: 1.0
species: 232520

218285
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232074
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Lysyl-tRNA

233685
type: Reaction
product: 222554
product: 222542
reactant: 222530
fast: false
reversible: true
name: (3S)-3-Hydroxyacyl-CoA hydro-lyase

222554
type: SpeciesReference
stoichiometry: 1.0
species: 231570

222542
type: SpeciesReference
stoichiometry: 1.0
species: 231401

231401
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: trans-2,3-Dehydroacyl-CoA

222530
type: SpeciesReference
stoichiometry: 1.0
species: 231321

233120
type: Reaction
product: 208266
product: 208254
product: 208242
reactant: 208230
reactant: 208218
fast: false
reversible: true
name: 1.1.1.86

208266
type: SpeciesReference
stoichiometry: 1.0
species: 232520

208254
type: SpeciesReference
stoichiometry: 1.0
species: 231598

208242
type: SpeciesReference
stoichiometry: 1.0
species: 232399

208230
type: SpeciesReference
stoichiometry: 1.0
species: 231597

208218
type: SpeciesReference
stoichiometry: 1.0
species: 232330

234257
type: Reaction
product: 237448
reactant: 237436
fast: false
reversible: true
name: Chorismate pyruvatemutase

237448
type: SpeciesReference
stoichiometry: 1.0
species: 231338

237436
type: SpeciesReference
stoichiometry: 1.0
species: 231337

232045
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Tyrosine (E)

232175
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Lipoyl-AMP

233449
type: Reaction
product: 216632
product: 216620
product: 216608
reactant: 216595
fast: false
reversible: false
name: 4.2.3.12

216632
type: SpeciesReference
stoichiometry: 1.0
species: 232520

216620
type: SpeciesReference
stoichiometry: 1.0
species: 231478

216608
type: SpeciesReference
stoichiometry: 1.0
species: 231481

216595
type: SpeciesReference
stoichiometry: 1.0
species: 231870

232178
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: gamma-Carotene

233180
type: Reaction
product: 210060
product: 210048
reactant: 210036
reactant: 210024
fast: false
reversible: true
name: 1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate carboxy-lyase

210060
type: SpeciesReference
stoichiometry: 1.0
species: 231518

210048
type: SpeciesReference
stoichiometry: 1.0
species: 231470

231470
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Aminoimidazole ribotide

210036
type: SpeciesReference
stoichiometry: 1.0
species: 232520

210024
type: SpeciesReference
stoichiometry: 1.0
species: 231881

232831
type: Reaction
product: 199834
product: 199822
reactant: 199810
reactant: 199798
fast: false
reversible: true
name: -

199834
type: SpeciesReference
stoichiometry: 1.0
species: 232520

199822
type: SpeciesReference
stoichiometry: 1.0
species: 232552

199810
type: SpeciesReference
stoichiometry: 1.0
species: 231518

199798
type: SpeciesReference
stoichiometry: 1.0
species: 231433

232932
type: Reaction
product: 202930
reactant: 202881
product: 202906
name: Pyruvate:carbon-dioxide ligase (ADP-forming)
reactant: 202857
reversible: false
reactant: 202869
product: 202894
product: 202918
fast: false

202930
type: SpeciesReference
stoichiometry: 1.0
species: 232520

202881
type: SpeciesReference
stoichiometry: 1.0
species: 232483

202906
type: SpeciesReference
stoichiometry: 1.0
species: 231609

202857
type: SpeciesReference
stoichiometry: 1.0
species: 231573

202869
type: SpeciesReference
stoichiometry: 1.0
species: 232411

202894
type: SpeciesReference
stoichiometry: 1.0
species: 231605

202918
type: SpeciesReference
stoichiometry: 1.0
species: 232419

232636
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Phe)

233121
type: Reaction
product: 208326
product: 208314
product: 208302
reactant: 208290
reactant: 208278
fast: false
reversible: false
name: Adenine aminohydrolase

208326
type: SpeciesReference
stoichiometry: 1.0
species: 232520

208314
type: SpeciesReference
stoichiometry: 1.0
species: 231545

208302
type: SpeciesReference
stoichiometry: 1.0
species: 232600

208290
type: SpeciesReference
stoichiometry: 1.0
species: 231570

208278
type: SpeciesReference
stoichiometry: 1.0
species: 232519

234005
type: Reaction
reversible: false
reactant: 229981
product: 230017
reactant: 229968
fast: false
reactant: 229993
product: 230029
product: 230041
product: 230005
name: MJ1249 homolog reaction

229981
type: SpeciesReference
stoichiometry: 1.0
species: 231570

230017
type: SpeciesReference
stoichiometry: 1.0
species: 231589

229968
type: SpeciesReference
stoichiometry: 1.0
species: 231614

231614
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid

229993
type: SpeciesReference
stoichiometry: 1.0
species: 231593

230029
type: SpeciesReference
stoichiometry: 1.0
species: 231545

230041
type: SpeciesReference
stoichiometry: 1.0
species: 232520

230005
type: SpeciesReference
stoichiometry: 1.0
species: 232468

233700
type: Reaction
reversible: false
product: 222893
product: 222917
name: GTP 7,8-8,9-dihydrolase (pyrophosphate-forming)
fast: false
product: 222881
reactant: 222857
product: 222905
reactant: 222869

222893
type: SpeciesReference
stoichiometry: 1.0
species: 232227

222917
type: SpeciesReference
stoichiometry: 3.0
species: 232520

222881
type: SpeciesReference
stoichiometry: 1.0
species: 232307

222857
type: SpeciesReference
stoichiometry: 1.0
species: 232283

222905
type: SpeciesReference
stoichiometry: 1.0
species: 231513

222869
type: SpeciesReference
stoichiometry: 3.0
species: 231570

233784
type: Reaction
product: 224936
product: 224923
product: 224911
reactant: 224899
reactant: 224886
fast: false
reversible: true
name: 1.3.1.76

224936
type: SpeciesReference
stoichiometry: 1.0
species: 232520

224923
type: SpeciesReference
stoichiometry: 1.0
species: 231589

224911
type: SpeciesReference
stoichiometry: 1.0
species: 232251

224899
type: SpeciesReference
stoichiometry: 1.0
species: 231593

224886
type: SpeciesReference
stoichiometry: 1.0
species: 232246

233205
type: Reaction
product: 210826
product: 210814
product: 210802
reactant: 210790
reactant: 210777
fast: false
reversible: true
name: (R)-Lactate:NAD+ oxidoreductase

210826
type: SpeciesReference
stoichiometry: 1.0
species: 232520

210814
type: SpeciesReference
stoichiometry: 1.0
species: 231589

210802
type: SpeciesReference
stoichiometry: 1.0
species: 232411

210790
type: SpeciesReference
stoichiometry: 1.0
species: 231593

210777
type: SpeciesReference
stoichiometry: 1.0
species: 231326

233349
type: Reaction
product: 214612
fast: false
reversible: true
name: Exchange: (Iron)

214612
type: SpeciesReference
stoichiometry: 1.0
species: 231730

232941
type: Reaction
product: 203242
product: 203230
product: 203218
reactant: 203206
reactant: 203194
fast: false
reversible: false
name: Lycopene cyclase

203242
type: SpeciesReference
stoichiometry: 1.0
species: 232520

203230
type: SpeciesReference
stoichiometry: 1.0
species: 231597

203218
type: SpeciesReference
stoichiometry: 1.0
species: 232620

203206
type: SpeciesReference
stoichiometry: 1.0
species: 231598

203194
type: SpeciesReference
stoichiometry: 1.0
species: 232178

231665
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Zinc (E)

233881
type: Reaction
product: 227230
fast: false
reversible: true
name: Exchange: (Fumarate)

227230
type: SpeciesReference
stoichiometry: 1.0
species: 231718

233216
type: Reaction
product: 211082
reactant: 211070
reactant: 211058
fast: false
reversible: true
name: 4.2.1.17

211082
type: SpeciesReference
stoichiometry: 1.0
species: 232331

232331
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 3-Hydroxybutanoyl-CoA

211070
type: SpeciesReference
stoichiometry: 1.0
species: 231570

211058
type: SpeciesReference
stoichiometry: 1.0
species: 232259

233924
type: Reaction
product: 228001
fast: false
reversible: true
name: Exchange: (Zinc)

228001
type: SpeciesReference
stoichiometry: 1.0
species: 231665

233573
type: Reaction
product: 219650
product: 219638
product: 219626
reactant: 219614
reactant: 219602
fast: false
reversible: true
name: (R)-Pantoate:NADP+ 2-oxidoreductase

219650
type: SpeciesReference
stoichiometry: 1.0
species: 232520

219638
type: SpeciesReference
stoichiometry: 1.0
species: 231598

219626
type: SpeciesReference
stoichiometry: 1.0
species: 232356

219614
type: SpeciesReference
stoichiometry: 1.0
species: 231597

219602
type: SpeciesReference
stoichiometry: 1.0
species: 231430

233172
type: Reaction
product: 209842
product: 209830
reactant: 209818
reactant: 209806
fast: false
reversible: false
name: O-Succinyl-L-homoserine succinate-lyase (adding cysteine)

209842
type: SpeciesReference
stoichiometry: 1.0
species: 232287

209830
type: SpeciesReference
stoichiometry: 1.0
species: 232539

209818
type: SpeciesReference
stoichiometry: 1.0
species: 232492

209806
type: SpeciesReference
stoichiometry: 1.0
species: 232049

232928
type: Reaction
reactant: 202713
reversible: true
reactant: 202737
fast: false
name: 1.2.7.1
product: 202749
product: 202761
reactant: 202725
product: 202773

202713
type: SpeciesReference
stoichiometry: 1.0
species: 231413

202737
type: SpeciesReference
stoichiometry: 1.0
species: 231517

202749
type: SpeciesReference
stoichiometry: 1.0
species: 231402

202761
type: SpeciesReference
stoichiometry: 1.0
species: 232407

202725
type: SpeciesReference
stoichiometry: 1.0
species: 232411

202773
type: SpeciesReference
stoichiometry: 1.0
species: 231518

234145
type: Reaction
product: 234571
reactant: 234559
fast: false
reversible: true
name: UDPglucose 4-epimerase

234571
type: SpeciesReference
stoichiometry: 1.0
species: 232367

234559
type: SpeciesReference
stoichiometry: 1.0
species: 232384

233440
type: Reaction
product: 216376
reactant: 216364
fast: false
reversible: true
name: 5.4.3.8

216376
type: SpeciesReference
stoichiometry: 1.0
species: 232599

216364
type: SpeciesReference
stoichiometry: 1.0
species: 231778

233045
type: Reaction
product: 205644
fast: false
reversible: true
name: Exchange: (Thymine)

205644
type: SpeciesReference
stoichiometry: 1.0
species: 231798

232992
type: Reaction
product: 204427
reactant: 204390
product: 204451
fast: false
reactant: 204378
product: 204415
name: 6.1.1.6
reactant: 204402
product: 204439
reversible: false

204427
type: SpeciesReference
stoichiometry: 1.0
species: 231513

204390
type: SpeciesReference
stoichiometry: 1.0
species: 232247

204451
type: SpeciesReference
stoichiometry: 1.0
species: 232520

204378
type: SpeciesReference
stoichiometry: 1.0
species: 231573

204415
type: SpeciesReference
stoichiometry: 1.0
species: 232396

204402
type: SpeciesReference
stoichiometry: 1.0
species: 232644

232644
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Lys)

204439
type: SpeciesReference
stoichiometry: 1.0
species: 232074

233101
type: Reaction
reactant: 207673
reversible: false
reactant: 207722
reactant: 207601
reactant: 207625
reactant: 207709
reactant: 207697
fast: false
reactant: 207649
reactant: 207661
name: Growth: Cofactors
reactant: 207613
reactant: 207637
reactant: 207685
product: 207734

207673
type: SpeciesReference
stoichiometry: 0.03
species: 232428

207722
type: SpeciesReference
stoichiometry: 0.02
species: 232547

207601
type: SpeciesReference
stoichiometry: 0.04
species: 231538

207625
type: SpeciesReference
stoichiometry: 0.04
species: 231597

207709
type: SpeciesReference
stoichiometry: 0.1
species: 231978

207697
type: SpeciesReference
stoichiometry: 0.04
species: 231517

207649
type: SpeciesReference
stoichiometry: 0.06
species: 232479

207661
type: SpeciesReference
stoichiometry: 0.06
species: 231425

207613
type: SpeciesReference
stoichiometry: 0.04
species: 231593

207637
type: SpeciesReference
stoichiometry: 0.06
species: 231397

207685
type: SpeciesReference
stoichiometry: 0.02
species: 232314

207734
type: SpeciesReference
stoichiometry: 1.0
species: 232190

233668
type: Reaction
product: 222180
reactant: 222168
fast: false
reversible: true
name: (S)-2-Aceto-2-hydroxybutanoate:NADP+ oxidoreductase (isomerizing)

222180
type: SpeciesReference
stoichiometry: 1.0
species: 231714

222168
type: SpeciesReference
stoichiometry: 1.0
species: 232443

234012
type: Reaction
product: 230186
product: 230174
reactant: 230162
fast: false
reversible: false
name: 1.4.3.19

230186
type: SpeciesReference
stoichiometry: 3.0
species: 232520

230174
type: SpeciesReference
stoichiometry: 1.0
species: 231921

230162
type: SpeciesReference
stoichiometry: 1.0
species: 232420

233181
type: Reaction
reactant: 210072
reactant: 210084
product: 210132
fast: false
product: 210120
product: 210108
name: 2-(Formamido)-N1-(5-phosphoribosyl)acetamidine cyclo-ligase
product: 210096
reversible: false

210072
type: SpeciesReference
stoichiometry: 1.0
species: 231573

210084
type: SpeciesReference
stoichiometry: 1.0
species: 231386

210132
type: SpeciesReference
stoichiometry: 1.0
species: 232520

210120
type: SpeciesReference
stoichiometry: 1.0
species: 231470

210108
type: SpeciesReference
stoichiometry: 1.0
species: 231609

210096
type: SpeciesReference
stoichiometry: 1.0
species: 231605

233861
type: Reaction
product: 226856
fast: false
reversible: true
name: Exchange: (D-Galactose)

226856
type: SpeciesReference
stoichiometry: 1.0
species: 231710

233380
type: Reaction
product: 215323
product: 215311
reactant: 215299
reactant: 215287
fast: false
reversible: true
name: Symport: (Deoxyuridine:H+)

215323
type: SpeciesReference
stoichiometry: 1.0
species: 232520

215311
type: SpeciesReference
stoichiometry: 1.0
species: 231434

215299
type: SpeciesReference
stoichiometry: 1.0
species: 232166

215287
type: SpeciesReference
stoichiometry: 1.0
species: 232403

232046
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide

232908
type: Reaction
product: 202157
product: 202145
reactant: 202134
reactant: 202120
fast: false
reversible: true
name: 2.4.2.4

202157
type: SpeciesReference
stoichiometry: 1.0
species: 231994

202145
type: SpeciesReference
stoichiometry: 1.0
species: 232519

202134
type: SpeciesReference
stoichiometry: 1.0
species: 231609

202120
type: SpeciesReference
stoichiometry: 1.0
species: 231874

233633
type: Reaction
product: 221312
product: 221300
reactant: 221288
reactant: 221276
reactant: 221264
fast: false
reversible: true
name: 2.6.1.1

221312
type: SpeciesReference
stoichiometry: 1.0
species: 232372

221300
type: SpeciesReference
stoichiometry: 1.0
species: 232306

221288
type: SpeciesReference
stoichiometry: 1.0
species: 232520

221276
type: SpeciesReference
stoichiometry: 1.0
species: 232375

221264
type: SpeciesReference
stoichiometry: 1.0
species: 231357

233848
type: Reaction
product: 226577
product: 226565
reactant: 226553
reactant: 226540
fast: false
reversible: true
name: Acetyl-CoA:orthophosphate acetyltransferase

226577
type: SpeciesReference
stoichiometry: 1.0
species: 231462

226565
type: SpeciesReference
stoichiometry: 1.0
species: 231517

226553
type: SpeciesReference
stoichiometry: 1.0
species: 231609

226540
type: SpeciesReference
stoichiometry: 1.0
species: 232407

231486
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 4-Guanidinobutanamide

234224
type: Reaction
product: 236543
product: 236531
reactant: 236519
fast: false
reversible: true
name: O-Succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase

236543
type: SpeciesReference
stoichiometry: 1.0
species: 231517

236531
type: SpeciesReference
stoichiometry: 1.0
species: 231333

236519
type: SpeciesReference
stoichiometry: 1.0
species: 231526

231489
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Mannose 1-phosphate

232993
type: Reaction
product: 204501
product: 204488
reactant: 204476
reactant: 204463
fast: false
reversible: true
name: ATP:sulfate adenylyltransferase

204501
type: SpeciesReference
stoichiometry: 1.0
species: 231469

204488
type: SpeciesReference
stoichiometry: 1.0
species: 231513

204476
type: SpeciesReference
stoichiometry: 1.0
species: 232310

204463
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232130
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Aspartyl-tRNA(Asp)

233397
type: Reaction
product: 215746
fast: false
reversible: true
name: Exchange: (L-Glutamine)

215746
type: SpeciesReference
stoichiometry: 1.0
species: 231897

233412
type: Reaction
product: 215952
product: 215940
reactant: 215928
reactant: 215916
fast: false
reversible: true
name: Symport: (Adenosine:H+)

215952
type: SpeciesReference
stoichiometry: 1.0
species: 232520

215940
type: SpeciesReference
stoichiometry: 1.0
species: 231509

215928
type: SpeciesReference
stoichiometry: 1.0
species: 232166

215916
type: SpeciesReference
stoichiometry: 1.0
species: 232311

233264
type: Reaction
product: 212362
product: 212386
product: 212374
reactant: 212325
reversible: false
product: 212398
name: 2.5.1.49
reactant: 212338
reactant: 212350
fast: false
product: 212410

212362
type: SpeciesReference
stoichiometry: 1.0
species: 232539

212386
type: SpeciesReference
stoichiometry: 1.0
species: 231818

212374
type: SpeciesReference
stoichiometry: 1.0
species: 232563

212325
type: SpeciesReference
stoichiometry: 1.0
species: 232271

212398
type: SpeciesReference
stoichiometry: 1.0
species: 232463

212338
type: SpeciesReference
stoichiometry: 1.0
species: 231745

212350
type: SpeciesReference
stoichiometry: 1.0
species: 231821

212410
type: SpeciesReference
stoichiometry: 2.0
species: 232520

232090
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 4-Guanidinobutanoate

232880
type: Reaction
product: 201239
product: 201227
reactant: 201214
reactant: 201202
fast: false
reversible: true
name: 2.3.1.30

201239
type: SpeciesReference
stoichiometry: 1.0
species: 231517

201227
type: SpeciesReference
stoichiometry: 1.0
species: 232278

201214
type: SpeciesReference
stoichiometry: 1.0
species: 232407

201202
type: SpeciesReference
stoichiometry: 1.0
species: 232624

233301
type: Reaction
product: 213406
product: 213394
reactant: 213382
reactant: 213370
fast: false
reversible: true
name: UDPglucose:alpha-D-galactose-1-phosphate uridylyltransferase

213406
type: SpeciesReference
stoichiometry: 1.0
species: 232367

213394
type: SpeciesReference
stoichiometry: 1.0
species: 231369

213382
type: SpeciesReference
stoichiometry: 1.0
species: 231670

213370
type: SpeciesReference
stoichiometry: 1.0
species: 232384

233828
type: Reaction
product: 226034
fast: false
reversible: true
name: Exchange: (Cl-)

226034
type: SpeciesReference
stoichiometry: 1.0
species: 232010

232738
type: Reaction
product: 197275
reactant: 197263
fast: false
reversible: true
name: 5.4.1.2

197275
type: SpeciesReference
stoichiometry: 1.0
species: 232262

197263
type: SpeciesReference
stoichiometry: 1.0
species: 231742

231634
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (R)-3-Hydroxy-3-methyl-2-oxobutanoate

234068
type: Reaction
product: 231992
fast: false
reversible: true
name: Exchange: (Thymidine)

231992
type: SpeciesReference
stoichiometry: 1.0
species: 232319

233977
type: Reaction
product: 229241
product: 229229
reactant: 229217
reactant: 229205
reactant: 229193
fast: false
reversible: false
name: D-Glycerate:NADP+ 2-oxidoreductase

229241
type: SpeciesReference
stoichiometry: 1.0
species: 231597

229229
type: SpeciesReference
stoichiometry: 1.0
species: 231322

229217
type: SpeciesReference
stoichiometry: 1.0
species: 232520

229205
type: SpeciesReference
stoichiometry: 1.0
species: 231598

229193
type: SpeciesReference
stoichiometry: 1.0
species: 232640

233844
type: Reaction
product: 226516
fast: false
reversible: true
name: Exchange: (Glucose)

226516
type: SpeciesReference
stoichiometry: 1.0
species: 231681

232940
type: Reaction
product: 203182
product: 203170
reactant: 203158
reactant: 203146
fast: false
reversible: false
name: Riboflavin-5-phosphate phosphohydrolase (acid optimum)

203182
type: SpeciesReference
stoichiometry: 1.0
species: 231609

203170
type: SpeciesReference
stoichiometry: 1.0
species: 231341

203158
type: SpeciesReference
stoichiometry: 1.0
species: 231570

203146
type: SpeciesReference
stoichiometry: 1.0
species: 232616

233077
type: Reaction
product: 206659
product: 206647
reactant: 206635
reactant: 206623
fast: false
reversible: true
name: UTP:alpha-D-hexose-1-phosphate uridylyltransferase

206659
type: SpeciesReference
stoichiometry: 1.0
species: 232367

206647
type: SpeciesReference
stoichiometry: 1.0
species: 231513

206635
type: SpeciesReference
stoichiometry: 1.0
species: 231670

206623
type: SpeciesReference
stoichiometry: 1.0
species: 232675

233236
type: Reaction
product: 211627
product: 211615
reactant: 211602
reactant: 211590
fast: false
reversible: true
name: Symport: (L-Serine:H+)

211627
type: SpeciesReference
stoichiometry: 1.0
species: 232520

211615
type: SpeciesReference
stoichiometry: 1.0
species: 232624

211602
type: SpeciesReference
stoichiometry: 1.0
species: 232166

211590
type: SpeciesReference
stoichiometry: 1.0
species: 231901

233929
type: Reaction
product: 228123
fast: false
reversible: true
name: Exchange: (Citrate)

228123
type: SpeciesReference
stoichiometry: 1.0
species: 231746

233733
type: Reaction
product: 223746
product: 223734
reactant: 223722
reactant: 223710
fast: false
reversible: true
name: Donor:hydrogen-peroxide oxidoreductase

223746
type: SpeciesReference
stoichiometry: 1.0
species: 231518

223734
type: SpeciesReference
stoichiometry: 1.0
species: 232496

232496
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2-Phenylacetamide

223722
type: SpeciesReference
stoichiometry: 1.0
species: 231606

223710
type: SpeciesReference
stoichiometry: 1.0
species: 232683

233893
type: Reaction
product: 227375
fast: false
reversible: true
name: Exchange: (Hexadecanoic Acid)

227375
type: SpeciesReference
stoichiometry: 1.0
species: 232103

232432
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Phosphoribosyl-ATP

233585
type: Reaction
product: 220002
product: 219990
reactant: 219978
reactant: 219966
fast: false
reversible: true
name: 4.99.1.4

220002
type: SpeciesReference
stoichiometry: 1.0
species: 232251

219990
type: SpeciesReference
stoichiometry: 1.0
species: 232408

232408
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Iron

219978
type: SpeciesReference
stoichiometry: 2.0
species: 232520

219966
type: SpeciesReference
stoichiometry: 1.0
species: 232428

233600
type: Reaction
product: 220424
product: 220412
reactant: 220400
reactant: 220388
fast: false
reversible: false
name: Acetyl-CoA:L-homoserine O-acetyltransferase

220424
type: SpeciesReference
stoichiometry: 1.0
species: 232271

220412
type: SpeciesReference
stoichiometry: 1.0
species: 231517

220400
type: SpeciesReference
stoichiometry: 1.0
species: 232607

220388
type: SpeciesReference
stoichiometry: 1.0
species: 232407

232435
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Alanyl-tRNA

233332
type: Reaction
product: 214274
product: 214250
fast: false
product: 214262
reactant: 214226
reactant: 214238
product: 214286
reversible: false
reactant: 214214
name: ABC-T: Iron

214274
type: SpeciesReference
stoichiometry: 1.0
species: 232520

214250
type: SpeciesReference
stoichiometry: 1.0
species: 232408

214262
type: SpeciesReference
stoichiometry: 1.0
species: 231605

214226
type: SpeciesReference
stoichiometry: 1.0
species: 231570

214238
type: SpeciesReference
stoichiometry: 1.0
species: 231573

214286
type: SpeciesReference
stoichiometry: 1.0
species: 231609

214214
type: SpeciesReference
stoichiometry: 1.0
species: 231730

233281
type: Reaction
reactant: 212838
name: L-Glutamate:tRNA(Glu) ligase (AMP-forming)
product: 212890
fast: false
reactant: 212825
product: 212864
product: 212902
reversible: false
product: 212877
reactant: 212851

212838
type: SpeciesReference
stoichiometry: 1.0
species: 232372

212890
type: SpeciesReference
stoichiometry: 1.0
species: 232396

212825
type: SpeciesReference
stoichiometry: 1.0
species: 232592

212864
type: SpeciesReference
stoichiometry: 1.0
species: 232139

212902
type: SpeciesReference
stoichiometry: 1.0
species: 232520

212877
type: SpeciesReference
stoichiometry: 1.0
species: 231513

212851
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233057
type: Reaction
product: 206017
product: 206005
reactant: 205993
reactant: 205981
fast: false
reversible: false
name: Lauroyl-CoA:(acceptor) 2,3-oxidoreductase

206017
type: SpeciesReference
stoichiometry: 1.0
species: 231914

206005
type: SpeciesReference
stoichiometry: 1.0
species: 231857

205993
type: SpeciesReference
stoichiometry: 1.0
species: 231538

205981
type: SpeciesReference
stoichiometry: 1.0
species: 232226

233780
type: Reaction
product: 224821
product: 224808
reactant: 224796
fast: false
reversible: true
name: 4.2.1.75

224821
type: SpeciesReference
stoichiometry: 1.0
species: 231570

224808
type: SpeciesReference
stoichiometry: 1.0
species: 232158

224796
type: SpeciesReference
stoichiometry: 1.0
species: 232061

234001
type: Reaction
product: 229894
product: 229882
reactant: 229870
reactant: 229857
fast: false
reversible: true
name: 1.3.3.4

229894
type: SpeciesReference
stoichiometry: 6.0
species: 231570

229882
type: SpeciesReference
stoichiometry: 2.0
species: 232211

229870
type: SpeciesReference
stoichiometry: 3.0
species: 231606

229857
type: SpeciesReference
stoichiometry: 2.0
species: 232266

233324
type: Reaction
product: 213997
product: 213985
reactant: 213973
reactant: 213961
fast: false
reversible: false
name: Symport: (Orthophosphate:H+)

213997
type: SpeciesReference
stoichiometry: 1.0
species: 232520

213985
type: SpeciesReference
stoichiometry: 1.0
species: 231609

213973
type: SpeciesReference
stoichiometry: 1.0
species: 232166

213961
type: SpeciesReference
stoichiometry: 1.0
species: 231766

233176
type: Reaction
reactant: 209915
product: 209976
product: 209952
reactant: 209927
reactant: 209903
product: 209964
name: Palmitate:CoA ligase (AMP-forming)
reversible: true
fast: false
product: 209940

209915
type: SpeciesReference
stoichiometry: 1.0
species: 231381

209976
type: SpeciesReference
stoichiometry: 1.0
species: 232520

209952
type: SpeciesReference
stoichiometry: 1.0
species: 232535

209927
type: SpeciesReference
stoichiometry: 1.0
species: 231517

209903
type: SpeciesReference
stoichiometry: 1.0
species: 231573

209964
type: SpeciesReference
stoichiometry: 1.0
species: 231513

209940
type: SpeciesReference
stoichiometry: 1.0
species: 232396

232827
type: Reaction
reactant: 199676
reactant: 199701
reversible: false
name: isochorismate:2-oxoglutarate:cyclodienyltransferase(decarboxylating,
product: 199713
product: 199726
reactant: 199689
fast: false
product: 199738

199676
type: SpeciesReference
stoichiometry: 1.0
species: 232375

199701
type: SpeciesReference
stoichiometry: 1.0
species: 232520

199713
type: SpeciesReference
stoichiometry: 1.0
species: 231637

199726
type: SpeciesReference
stoichiometry: 1.0
species: 232411

199689
type: SpeciesReference
stoichiometry: 1.0
species: 232436

199738
type: SpeciesReference
stoichiometry: 1.0
species: 231518

234229
type: Reaction
product: 236699
product: 236687
reactant: 236675
reactant: 236663
reactant: 236651
fast: false
reversible: false
name: 4-Methyl-2-oxopentanoate:lipoamide oxidoreductase(decarboxylating

236699
type: SpeciesReference
stoichiometry: 1.0
species: 231518

236687
type: SpeciesReference
stoichiometry: 1.0
species: 232336

236675
type: SpeciesReference
stoichiometry: 1.0
species: 232520

236663
type: SpeciesReference
stoichiometry: 1.0
species: 231377

236651
type: SpeciesReference
stoichiometry: 1.0
species: 231433

233296
type: Reaction
product: 213286
product: 213274
reactant: 213262
reactant: 213250
fast: false
reversible: false
name: Adenosine 5'-monophosphate phosphohydrolase

213286
type: SpeciesReference
stoichiometry: 1.0
species: 231609

213274
type: SpeciesReference
stoichiometry: 1.0
species: 231509

213262
type: SpeciesReference
stoichiometry: 1.0
species: 231570

213250
type: SpeciesReference
stoichiometry: 1.0
species: 232396

232774
type: Reaction
product: 198266
product: 198254
reactant: 198242
reactant: 198229
reactant: 198217
fast: false
reversible: true
name: 2.1.1.130

198266
type: SpeciesReference
stoichiometry: 1.0
species: 232412

198254
type: SpeciesReference
stoichiometry: 1.0
species: 231786

198242
type: SpeciesReference
stoichiometry: 1.0
species: 232520

198229
type: SpeciesReference
stoichiometry: 1.0
species: 231549

198217
type: SpeciesReference
stoichiometry: 1.0
species: 231765

234085
type: Reaction
product: 232244
fast: false
reversible: true
name: Exchange: (Deoxycytidine)

232244
type: SpeciesReference
stoichiometry: 1.0
species: 232026

233992
type: Reaction
product: 229651
product: 229639
reactant: 229627
reactant: 229615
fast: false
reversible: true
name: 10-Formyltetrahydrofolate:5'-phosphoribosylglycinamide

229651
type: SpeciesReference
stoichiometry: 1.0
species: 231961

229639
type: SpeciesReference
stoichiometry: 1.0
species: 231397

229627
type: SpeciesReference
stoichiometry: 1.0
species: 231521

229615
type: SpeciesReference
stoichiometry: 1.0
species: 231425

231810
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5-O-(1-Carboxyvinyl)-3-phosphoshikimate

233900
type: Reaction
product: 227532
product: 227520
product: 227508
reactant: 227496
reactant: 227484
fast: false
reversible: true
name: 2,3,4,5-Tetrahydrodipicolinate:NADP+ oxidoreductase

227532
type: SpeciesReference
stoichiometry: 1.0
species: 232520

227520
type: SpeciesReference
stoichiometry: 1.0
species: 231598

227508
type: SpeciesReference
stoichiometry: 1.0
species: 231954

227496
type: SpeciesReference
stoichiometry: 1.0
species: 231597

227484
type: SpeciesReference
stoichiometry: 1.0
species: 231342

232887
type: Reaction
product: 201420
product: 201408
product: 201396
reactant: 201383
reactant: 201371
fast: false
reversible: true
name: 2-Phenylacetamide amidohydrolase

201420
type: SpeciesReference
stoichiometry: 1.0
species: 232520

201408
type: SpeciesReference
stoichiometry: 1.0
species: 231545

201396
type: SpeciesReference
stoichiometry: 1.0
species: 231385

201383
type: SpeciesReference
stoichiometry: 1.0
species: 231570

201371
type: SpeciesReference
stoichiometry: 1.0
species: 232496

233156
type: Reaction
reactant: 209343
product: 209379
product: 209392
fast: false
reactant: 209367
product: 209404
name: (R)-4'-Phosphopantothenate:L-cysteine ligase
product: 209417
reactant: 209355
reversible: false

209343
type: SpeciesReference
stoichiometry: 1.0
species: 231573

209379
type: SpeciesReference
stoichiometry: 1.0
species: 231605

209392
type: SpeciesReference
stoichiometry: 1.0
species: 231609

209367
type: SpeciesReference
stoichiometry: 1.0
species: 232567

209404
type: SpeciesReference
stoichiometry: 1.0
species: 231854

209417
type: SpeciesReference
stoichiometry: 1.0
species: 232520

209355
type: SpeciesReference
stoichiometry: 1.0
species: 231849

234080
type: Reaction
product: 232172
name: ABC-T: (Zinc)
product: 232196
reactant: 232160
reactant: 232148
fast: false
reversible: false
product: 232208
product: 232184
reactant: 232136

232172
type: SpeciesReference
stoichiometry: 1.0
species: 232423

232196
type: SpeciesReference
stoichiometry: 1.0
species: 231609

232160
type: SpeciesReference
stoichiometry: 1.0
species: 231570

232148
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232208
type: SpeciesReference
stoichiometry: 1.0
species: 232520

232184
type: SpeciesReference
stoichiometry: 1.0
species: 231605

232136
type: SpeciesReference
stoichiometry: 1.0
species: 231665

232754
type: Reaction
product: 197794
product: 197782
product: 197770
reactant: 197758
reactant: 197746
fast: false
reversible: true
name: Isocitrate:NADP+ oxidoreductase (decarboxylating)

197794
type: SpeciesReference
stoichiometry: 1.0
species: 232520

197782
type: SpeciesReference
stoichiometry: 1.0
species: 231598

197770
type: SpeciesReference
stoichiometry: 1.0
species: 232195

197758
type: SpeciesReference
stoichiometry: 1.0
species: 231597

197746
type: SpeciesReference
stoichiometry: 1.0
species: 231734

233401
type: Reaction
product: 215770
fast: false
reversible: true
name: Exchange: (L-Alanine)

215770
type: SpeciesReference
stoichiometry: 1.0
species: 231982

233756
type: Reaction
product: 224242
product: 224230
product: 224218
reactant: 224206
reactant: 224194
fast: false
reversible: false
name: 3.6.1.-

224242
type: SpeciesReference
stoichiometry: 2.0
species: 232520

224230
type: SpeciesReference
stoichiometry: 1.0
species: 231513

224218
type: SpeciesReference
stoichiometry: 1.0
species: 231626

224206
type: SpeciesReference
stoichiometry: 1.0
species: 231570

224194
type: SpeciesReference
stoichiometry: 1.0
species: 231870

234220
type: Reaction
product: 236470
product: 236458
reactant: 236446
reactant: 236434
fast: false
reversible: false
name: ATP:L-glutamate 5-phosphotransferase

236470
type: SpeciesReference
stoichiometry: 1.0
species: 231406

236458
type: SpeciesReference
stoichiometry: 1.0
species: 231605

236446
type: SpeciesReference
stoichiometry: 1.0
species: 232372

236434
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233876
type: Reaction
product: 227133
product: 227121
reactant: 227109
reactant: 227097
fast: false
reversible: false
name: 2.7.4.16

227133
type: SpeciesReference
stoichiometry: 1.0
species: 232623

227121
type: SpeciesReference
stoichiometry: 1.0
species: 231605

227109
type: SpeciesReference
stoichiometry: 1.0
species: 232352

227097
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233148
type: Reaction
product: 209126
reactant: 209114
fast: false
reversible: true
name: beta-D-Glucose 6-phosphate ketol-isomerase

209126
type: SpeciesReference
stoichiometry: 1.0
species: 232504

209114
type: SpeciesReference
stoichiometry: 1.0
species: 232082

232082
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: beta-D-Glucose 6-phosphate

234053
type: Reaction
reactant: 231167
name: ABC-T: (Phosphonate)
reactant: 231155
fast: false
reactant: 231143
product: 231179
product: 231216
product: 231191
reversible: false
product: 231203

231167
type: SpeciesReference
stoichiometry: 1.0
species: 231570

231155
type: SpeciesReference
stoichiometry: 1.0
species: 231573

231143
type: SpeciesReference
stoichiometry: 1.0
species: 231389

231179
type: SpeciesReference
stoichiometry: 1.0
species: 231557

231557
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Phosphonate

231216
type: SpeciesReference
stoichiometry: 1.0
species: 231609

231191
type: SpeciesReference
stoichiometry: 1.0
species: 231605

231203
type: SpeciesReference
stoichiometry: 1.0
species: 232520

232879
type: Reaction
product: 201154
product: 201190
reactant: 201130
reactant: 201142
name: L-Alanine:tRNA(Ala) ligase (AMP-forming)
product: 201166
reversible: false
reactant: 201118
product: 201178
fast: false

201154
type: SpeciesReference
stoichiometry: 1.0
species: 232396

201190
type: SpeciesReference
stoichiometry: 1.0
species: 232520

201130
type: SpeciesReference
stoichiometry: 1.0
species: 232291

201142
type: SpeciesReference
stoichiometry: 1.0
species: 232691

201166
type: SpeciesReference
stoichiometry: 1.0
species: 231513

201118
type: SpeciesReference
stoichiometry: 1.0
species: 231573

201178
type: SpeciesReference
stoichiometry: 1.0
species: 232435

232727
type: Reaction
reactant: 196901
product: 196962
product: 196950
name: Ammonia:ferredoxin oxidoreductase
fast: false
reactant: 196926
product: 196938
reversible: false
reactant: 196913

196901
type: SpeciesReference
stoichiometry: 1.0
species: 232503

196962
type: SpeciesReference
stoichiometry: 6.0
species: 231413

196950
type: SpeciesReference
stoichiometry: 2.0
species: 231570

196926
type: SpeciesReference
stoichiometry: 1.0
species: 232520

196938
type: SpeciesReference
stoichiometry: 1.0
species: 231545

196913
type: SpeciesReference
stoichiometry: 6.0
species: 231402

232746
type: Reaction
product: 197542
product: 197530
reactant: 197518
reactant: 197506
reactant: 197494
fast: false
reversible: true
name: 1.3.1.54

197542
type: SpeciesReference
stoichiometry: 1.0
species: 231597

197530
type: SpeciesReference
stoichiometry: 1.0
species: 231738

197518
type: SpeciesReference
stoichiometry: 1.0
species: 232520

197506
type: SpeciesReference
stoichiometry: 1.0
species: 231598

197494
type: SpeciesReference
stoichiometry: 1.0
species: 231741

231741
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Cobalt-precorrin 6

232009
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Hydrogen (E)

234076
type: Reaction
product: 232112
product: 232100
reactant: 232088
fast: false
reversible: false
name: CrtI

232112
type: SpeciesReference
stoichiometry: 2.0
species: 232520

232100
type: SpeciesReference
stoichiometry: 1.0
species: 232162

232088
type: SpeciesReference
stoichiometry: 1.0
species: 232263

232263
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Phytofluene

233157
type: Reaction
product: 209441
reactant: 209429
fast: false
reversible: false
name: Lycopene cyclase

209441
type: SpeciesReference
stoichiometry: 1.0
species: 232178

209429
type: SpeciesReference
stoichiometry: 1.0
species: 232170

233748
type: Reaction
product: 224049
product: 224037
product: 224025
reactant: 224013
reactant: 224001
fast: false
reversible: true
name: 4-Guanidinobutanamide amidohydrolase

224049
type: SpeciesReference
stoichiometry: 1.0
species: 232520

224037
type: SpeciesReference
stoichiometry: 1.0
species: 231545

224025
type: SpeciesReference
stoichiometry: 1.0
species: 232090

224013
type: SpeciesReference
stoichiometry: 1.0
species: 231570

224001
type: SpeciesReference
stoichiometry: 1.0
species: 231486

233849
type: Reaction
product: 226589
fast: false
reversible: true
name: Exchange: (Succinate)

226589
type: SpeciesReference
stoichiometry: 1.0
species: 231993

233024
type: Reaction
product: 205331
fast: false
reversible: true
name: Exchange: (Ferrichrome)

205331
type: SpeciesReference
stoichiometry: 1.0
species: 231910

233753
type: Reaction
product: 224182
product: 224170
reactant: 224158
fast: false
reversible: true
name: 2-Amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)

224182
type: SpeciesReference
stoichiometry: 1.0
species: 231570

224170
type: SpeciesReference
stoichiometry: 1.0
species: 231870

224158
type: SpeciesReference
stoichiometry: 1.0
species: 232460

233461
type: Reaction
product: 216794
fast: false
reversible: true
name: Exchange: (L-Histidine)

216794
type: SpeciesReference
stoichiometry: 1.0
species: 231666

233620
type: Reaction
product: 220914
product: 220902
reactant: 220890
fast: false
reversible: true
name: N6-(1,2-Dicarboxyethyl)AMP AMP-lyase

220914
type: SpeciesReference
stoichiometry: 1.0
species: 232396

220902
type: SpeciesReference
stoichiometry: 1.0
species: 231501

220890
type: SpeciesReference
stoichiometry: 1.0
species: 231354

233225
type: Reaction
product: 211371
product: 211359
reactant: 211347
reactant: 211335
fast: false
reversible: true
name: Symport: (L-Lysine:H+)

211371
type: SpeciesReference
stoichiometry: 1.0
species: 232520

211359
type: SpeciesReference
stoichiometry: 1.0
species: 232247

211347
type: SpeciesReference
stoichiometry: 1.0
species: 232166

211335
type: SpeciesReference
stoichiometry: 1.0
species: 231974

231974
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: L-Lysine (E)

233352
type: Reaction
product: 214648
reactant: 214636
reactant: 214624
fast: false
reversible: true
name: Phosphoribosyl-AMP 1,6-hydrolase

214648
type: SpeciesReference
stoichiometry: 1.0
species: 231869

214636
type: SpeciesReference
stoichiometry: 1.0
species: 231570

214624
type: SpeciesReference
stoichiometry: 1.0
species: 232286

233689
type: Reaction
product: 222662
product: 222650
reactant: 222638
reactant: 222626
fast: false
reversible: false
name: 5-Methyltetrahydropteroyltri-L-glutamate:L-homocysteine

222662
type: SpeciesReference
stoichiometry: 1.0
species: 232668

222650
type: SpeciesReference
stoichiometry: 1.0
species: 232387

222638
type: SpeciesReference
stoichiometry: 1.0
species: 232539

222626
type: SpeciesReference
stoichiometry: 1.0
species: 231909

233472
type: Reaction
product: 217040
product: 217027
product: 217014
reactant: 217002
reactant: 216989
fast: false
reversible: false
name: Geranyl-diphosphate:isopentenyl-diphosphate geranyltrans-transferase

217040
type: SpeciesReference
stoichiometry: 1.0
species: 232520

217027
type: SpeciesReference
stoichiometry: 1.0
species: 231674

217014
type: SpeciesReference
stoichiometry: 1.0
species: 231513

217002
type: SpeciesReference
stoichiometry: 1.0
species: 231458

216989
type: SpeciesReference
stoichiometry: 1.0
species: 231809

234033
type: Reaction
product: 230669
product: 230656
reactant: 230644
fast: false
reversible: false
name: CrtI

230669
type: SpeciesReference
stoichiometry: 1.0
species: 232495

230656
type: SpeciesReference
stoichiometry: 1.0
species: 232263

230644
type: SpeciesReference
stoichiometry: 1.0
species: 232267

232834
type: Reaction
product: 199882
product: 199870
reactant: 199858
reactant: 199846
fast: false
reversible: true
name: 3.5.4.9

199882
type: SpeciesReference
stoichiometry: 1.0
species: 232520

199870
type: SpeciesReference
stoichiometry: 1.0
species: 231425

199858
type: SpeciesReference
stoichiometry: 1.0
species: 231570

199846
type: SpeciesReference
stoichiometry: 1.0
species: 231673

232961
type: Reaction
product: 203726
fast: false
reversible: true
name: Exchange: (Glycoaldehyde)

203726
type: SpeciesReference
stoichiometry: 1.0
species: 232187

233109
type: Reaction
product: 207978
reactant: 207965
fast: false
reversible: false
name: Growth: Lipids

207978
type: SpeciesReference
stoichiometry: 1.0
species: 232186

207965
type: SpeciesReference
stoichiometry: 23.58
species: 231906

231906
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 2,3-Di-O-phytanyl-sn-glycerol

234048
type: Reaction
product: 231058
product: 231046
reactant: 231034
reactant: 231022
fast: false
reversible: true
name: 2.7.4.23

231058
type: SpeciesReference
stoichiometry: 1.0
species: 231605

231046
type: SpeciesReference
stoichiometry: 1.0
species: 231310

231034
type: SpeciesReference
stoichiometry: 1.0
species: 231573

231022
type: SpeciesReference
stoichiometry: 1.0
species: 232154

232154
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: D-Ribose 1,5-bisphosphate

232723
type: Reaction
product: 196817
reactant: 196805
fast: false
reversible: true
name: 5.4.2.7

196817
type: SpeciesReference
stoichiometry: 1.0
species: 231997

196805
type: SpeciesReference
stoichiometry: 1.0
species: 231994

233428
type: Reaction
product: 216122
reactant: 216110
fast: false
reversible: true
name: Diffusion: (CO2)

216122
type: SpeciesReference
stoichiometry: 1.0
species: 231518

216110
type: SpeciesReference
stoichiometry: 1.0
species: 231762

233433
type: Reaction
product: 216280
product: 216268
reactant: 216256
reactant: 216244
fast: false
reversible: false
name: Urea amidohydrolase

216280
type: SpeciesReference
stoichiometry: 2.0
species: 231545

216268
type: SpeciesReference
stoichiometry: 1.0
species: 231518

216256
type: SpeciesReference
stoichiometry: 1.0
species: 231570

216244
type: SpeciesReference
stoichiometry: 1.0
species: 232507

233680
type: Reaction
product: 222494
fast: false
reversible: true
name: Exchange: (NH3)

222494
type: SpeciesReference
stoichiometry: 1.0
species: 231737

233285
type: Reaction
product: 212998
product: 213010
reactant: 212974
product: 213022
fast: false
product: 213034
reactant: 212986
name: L-Aspartate:tRNA(Asp) ligase (AMP-forming)
reversible: false
reactant: 212962

212998
type: SpeciesReference
stoichiometry: 1.0
species: 232130

213010
type: SpeciesReference
stoichiometry: 1.0
species: 231513

212974
type: SpeciesReference
stoichiometry: 1.0
species: 232243

213022
type: SpeciesReference
stoichiometry: 1.0
species: 232396

213034
type: SpeciesReference
stoichiometry: 1.0
species: 232520

212986
type: SpeciesReference
stoichiometry: 1.0
species: 231573

212962
type: SpeciesReference
stoichiometry: 1.0
species: 232700

234132
type: Reaction
product: 233986
reactant: 233974
reactant: 233962
reactant: 233950
fast: false
reversible: true
name: IMP 1,2-hydrolase (decyclizing)

233986
type: SpeciesReference
stoichiometry: 1.0
species: 232046

233974
type: SpeciesReference
stoichiometry: 1.0
species: 232520

233962
type: SpeciesReference
stoichiometry: 1.0
species: 231570

233950
type: SpeciesReference
stoichiometry: 1.0
species: 231438

234252
type: Reaction
product: 237352
product: 237339
reactant: 237327
fast: false
reversible: true
name: 5-O-(1-Carboxyvinyl)-3-phosphoshikimate phosphate-lyase

237352
type: SpeciesReference
stoichiometry: 1.0
species: 231609

237339
type: SpeciesReference
stoichiometry: 1.0
species: 231337

237327
type: SpeciesReference
stoichiometry: 1.0
species: 231810

233804
type: Reaction
product: 225369
fast: false
reactant: 225345
product: 225393
reactant: 225333
reactant: 225357
product: 225381
reversible: false
name: ABC-T: (Arsenite)
product: 225405

225369
type: SpeciesReference
stoichiometry: 1.0
species: 231801

225345
type: SpeciesReference
stoichiometry: 1.0
species: 231573

225393
type: SpeciesReference
stoichiometry: 1.0
species: 231609

225333
type: SpeciesReference
stoichiometry: 1.0
species: 232343

225357
type: SpeciesReference
stoichiometry: 1.0
species: 231570

225381
type: SpeciesReference
stoichiometry: 1.0
species: 231605

225405
type: SpeciesReference
stoichiometry: 1.0
species: 232520

232903
type: Reaction
product: 201975
product: 201963
product: 201950
reactant: 201938
reactant: 201926
fast: false
reversible: false
name: 2-Amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine-

201975
type: SpeciesReference
stoichiometry: 1.0
species: 232520

201963
type: SpeciesReference
stoichiometry: 1.0
species: 231446

201950
type: SpeciesReference
stoichiometry: 1.0
species: 231513

201938
type: SpeciesReference
stoichiometry: 1.0
species: 231941

201926
type: SpeciesReference
stoichiometry: 1.0
species: 232114

233320
type: Reaction
product: 213865
product: 213852
reactant: 213840
reactant: 213828
fast: false
reversible: false
name: Symport: (Folate:H+)

213865
type: SpeciesReference
stoichiometry: 1.0
species: 232520

213852
type: SpeciesReference
stoichiometry: 1.0
species: 231334

213840
type: SpeciesReference
stoichiometry: 1.0
species: 232166

213828
type: SpeciesReference
stoichiometry: 1.0
species: 231645

233896
type: Reaction
product: 227411
product: 227399
reactant: 227387
fast: false
reversible: true
name: (S)-3-Hydroxyhexadecanoyl-CoA hydro-lyase

227411
type: SpeciesReference
stoichiometry: 1.0
species: 231570

227399
type: SpeciesReference
stoichiometry: 1.0
species: 231709

227387
type: SpeciesReference
stoichiometry: 1.0
species: 232098

232996
type: Reaction
product: 204550
product: 204538
reactant: 204526
reactant: 204513
fast: false
reversible: true
name: Phosphoenolpyruvate:3-phosphoshikimate

204550
type: SpeciesReference
stoichiometry: 1.0
species: 231810

204538
type: SpeciesReference
stoichiometry: 1.0
species: 231609

204526
type: SpeciesReference
stoichiometry: 1.0
species: 231482

204513
type: SpeciesReference
stoichiometry: 1.0
species: 232671

233548
type: Reaction
product: 218983
product: 218971
product: 218959
reactant: 218947
reactant: 218935
fast: false
reversible: false
name: S-(2-Hydroxyacyl)glutathione hydrolase

218983
type: SpeciesReference
stoichiometry: 1.0
species: 232520

218971
type: SpeciesReference
stoichiometry: 1.0
species: 231326

218959
type: SpeciesReference
stoichiometry: 1.0
species: 232363

218947
type: SpeciesReference
stoichiometry: 1.0
species: 231570

218935
type: SpeciesReference
stoichiometry: 1.0
species: 231330

233429
type: Reaction
product: 216170
product: 216158
reactant: 216146
reactant: 216134
fast: false
reversible: true
name: Symport: (Glycerol 1-P:H+)

216170
type: SpeciesReference
stoichiometry: 1.0
species: 232520

216158
type: SpeciesReference
stoichiometry: 1.0
species: 231441

216146
type: SpeciesReference
stoichiometry: 1.0
species: 232166

216134
type: SpeciesReference
stoichiometry: 1.0
species: 231562

233105
type: Reaction
reversible: false
reactant: 207831
name: Xanthosine-5'-phosphate:L-glutamine amido-ligase (AMP-forming)
product: 207867
reactant: 207843
product: 207892
reactant: 207855
fast: false
product: 207880
product: 207904
product: 207917
reactant: 207819

207831
type: SpeciesReference
stoichiometry: 1.0
species: 231398

207867
type: SpeciesReference
stoichiometry: 1.0
species: 232396

207843
type: SpeciesReference
stoichiometry: 1.0
species: 232612

207892
type: SpeciesReference
stoichiometry: 1.0
species: 232476

207855
type: SpeciesReference
stoichiometry: 1.0
species: 231570

207880
type: SpeciesReference
stoichiometry: 1.0
species: 231513

207904
type: SpeciesReference
stoichiometry: 1.0
species: 232372

207917
type: SpeciesReference
stoichiometry: 2.0
species: 232520

207819
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233813
type: Reaction
product: 225695
product: 225682
reactant: 225670
fast: false
reversible: true
name: 1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole

225695
type: SpeciesReference
stoichiometry: 1.0
species: 231630

225682
type: SpeciesReference
stoichiometry: 1.0
species: 231501

225670
type: SpeciesReference
stoichiometry: 1.0
species: 232057

233701
type: Reaction
product: 222953
reactant: 222941
reactant: 222929
fast: false
reversible: false
name: GTP 7,8-8,9-dihydrolase

222953
type: SpeciesReference
stoichiometry: 1.0
species: 231622

222941
type: SpeciesReference
stoichiometry: 1.0
species: 231570

222929
type: SpeciesReference
stoichiometry: 1.0
species: 232283

233785
type: Reaction
product: 224948
fast: false
reversible: true
name: Free: (Hydrogen)

224948
type: SpeciesReference
stoichiometry: 1.0
species: 232009

233865
type: Reaction
product: 226880
fast: false
reversible: true
name: Exchange: (Ornithine)

226880
type: SpeciesReference
stoichiometry: 1.0
species: 231833

233532
type: Reaction
product: 218515
product: 218502
reactant: 218490
reactant: 218478
fast: false
reversible: false
name: MJ1249 homolog reaction

218515
type: SpeciesReference
stoichiometry: 1.0
species: 231614

218502
type: SpeciesReference
stoichiometry: 1.0
species: 231589

218490
type: SpeciesReference
stoichiometry: 1.0
species: 232206

218478
type: SpeciesReference
stoichiometry: 1.0
species: 231593

233652
type: Reaction
product: 221724
product: 221712
reactant: 221699
fast: false
reversible: true
name: 2-Deoxy-D-ribose-5-phosphate acetaldehyde-lyase

221724
type: SpeciesReference
stoichiometry: 1.0
species: 232508

221712
type: SpeciesReference
stoichiometry: 1.0
species: 231313

221699
type: SpeciesReference
stoichiometry: 1.0
species: 231997

233557
type: Reaction
product: 219263
product: 219250
product: 219238
reactant: 219226
reactant: 219214
fast: false
reversible: false
name: 1.4.3.16

219263
type: SpeciesReference
stoichiometry: 1.0
species: 232520

219250
type: SpeciesReference
stoichiometry: 1.0
species: 232368

219238
type: SpeciesReference
stoichiometry: 1.0
species: 232295

232295
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: Iminoaspartate

219226
type: SpeciesReference
stoichiometry: 1.0
species: 231606

219214
type: SpeciesReference
stoichiometry: 1.0
species: 232243

233257
type: Reaction
product: 212181
product: 212169
reactant: 212157
reactant: 212145
fast: false
reversible: true
name: Symport: (L-Tyrosine:H+)

212181
type: SpeciesReference
stoichiometry: 1.0
species: 232520

212169
type: SpeciesReference
stoichiometry: 1.0
species: 232516

212157
type: SpeciesReference
stoichiometry: 1.0
species: 232166

212145
type: SpeciesReference
stoichiometry: 1.0
species: 232045

234104
type: Reaction
product: 232878
product: 232866
reactant: 232854
reactant: 232842
fast: false
reversible: true
name: Adenosine:orthophosphate ribosyltransferase

232878
type: SpeciesReference
stoichiometry: 1.0
species: 231450

232866
type: SpeciesReference
stoichiometry: 1.0
species: 232519

232854
type: SpeciesReference
stoichiometry: 1.0
species: 231609

232842
type: SpeciesReference
stoichiometry: 1.0
species: 231509

232868
type: Reaction
product: 200875
product: 200863
reactant: 200851
reactant: 200839
fast: false
reversible: false
name: 2.7.4.7

200875
type: SpeciesReference
stoichiometry: 1.0
species: 231885

200863
type: SpeciesReference
stoichiometry: 1.0
species: 231605

200851
type: SpeciesReference
stoichiometry: 1.0
species: 231522

200839
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232969
type: Reaction
fast: false
product: 203991
reversible: false
product: 203978
reactant: 203918
product: 203966
name: 6.1.1.2
product: 203954
reactant: 203942
reactant: 203930

203991
type: SpeciesReference
stoichiometry: 1.0
species: 232520

203978
type: SpeciesReference
stoichiometry: 1.0
species: 232335

232335
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Tryptophanyl-tRNA(Trp)

203918
type: SpeciesReference
stoichiometry: 1.0
species: 231573

203966
type: SpeciesReference
stoichiometry: 1.0
species: 231513

203954
type: SpeciesReference
stoichiometry: 1.0
species: 232396

203942
type: SpeciesReference
stoichiometry: 1.0
species: 232528

232528
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: tRNA(Trp)

203930
type: SpeciesReference
stoichiometry: 1.0
species: 232679

233424
type: Reaction
product: 216073
reactant: 216060
fast: false
reversible: true
name: Diffusion: (Hydrogen)

216073
type: SpeciesReference
stoichiometry: 1.0
species: 232495

216060
type: SpeciesReference
stoichiometry: 1.0
species: 232009

234129
type: Reaction
product: 233803
product: 233791
product: 233779
reactant: 233767
reactant: 233754
fast: false
reversible: false
name: 6-Phospho-D-gluconate:NADP+ 2-oxidoreductase (decarboxylating)

233803
type: SpeciesReference
stoichiometry: 1.0
species: 231598

233791
type: SpeciesReference
stoichiometry: 1.0
species: 231518

233779
type: SpeciesReference
stoichiometry: 1.0
species: 232334

233767
type: SpeciesReference
stoichiometry: 1.0
species: 231597

233754
type: SpeciesReference
stoichiometry: 1.0
species: 231841

233029
type: Reaction
product: 205439
fast: false
reversible: true
name: Exchange: (Adenosine-GDP-cobinamide)

205439
type: SpeciesReference
stoichiometry: 1.0
species: 232303

234069
type: Reaction
product: 232004
fast: false
reversible: true
name: Exchange: (Cytidine)

232004
type: SpeciesReference
stoichiometry: 1.0
species: 232692

232988
type: Reaction
product: 204269
product: 204257
reactant: 204219
reactant: 204207
product: 204281
reactant: 204232
product: 204245
reversible: false
name: 6.1.1.20
fast: false

204269
type: SpeciesReference
stoichiometry: 1.0
species: 232339

204257
type: SpeciesReference
stoichiometry: 1.0
species: 231513

204219
type: SpeciesReference
stoichiometry: 1.0
species: 232683

204207
type: SpeciesReference
stoichiometry: 1.0
species: 231573

204281
type: SpeciesReference
stoichiometry: 1.0
species: 232520

204232
type: SpeciesReference
stoichiometry: 1.0
species: 232636

204245
type: SpeciesReference
stoichiometry: 1.0
species: 232396

233980
type: Reaction
product: 229290
product: 229277
reactant: 229265
reactant: 229253
fast: false
reversible: false
name: Decanoyl-CoA:(acceptor) 2,3-oxidoreductase

229290
type: SpeciesReference
stoichiometry: 1.0
species: 231914

229277
type: SpeciesReference
stoichiometry: 1.0
species: 231693

229265
type: SpeciesReference
stoichiometry: 1.0
species: 231538

229253
type: SpeciesReference
stoichiometry: 1.0
species: 231702

234184
type: Reaction
reactant: 235467
product: 235503
reversible: false
reactant: 235454
fast: false
name: Deamido-NAD+:L-glutamine amido-ligase (AMP-forming)
product: 235479
reactant: 235442
product: 235527
product: 235491
product: 235515
reactant: 235430

235467
type: SpeciesReference
stoichiometry: 1.0
species: 231570

235503
type: SpeciesReference
stoichiometry: 1.0
species: 231593

235454
type: SpeciesReference
stoichiometry: 1.0
species: 232612

235479
type: SpeciesReference
stoichiometry: 1.0
species: 232396

235442
type: SpeciesReference
stoichiometry: 1.0
species: 232583

235527
type: SpeciesReference
stoichiometry: 2.0
species: 232520

235491
type: SpeciesReference
stoichiometry: 1.0
species: 231513

235515
type: SpeciesReference
stoichiometry: 1.0
species: 232372

235430
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232735
type: Reaction
reactant: 197191
product: 197239
product: 197227
fast: false
product: 197215
product: 197251
reactant: 197167
reactant: 197179
reactant: 197155
name: 6.3.1.-
reversible: true
product: 197203

197191
type: SpeciesReference
stoichiometry: 2.0
species: 231570

197239
type: SpeciesReference
stoichiometry: 2.0
species: 231609

197227
type: SpeciesReference
stoichiometry: 2.0
species: 231605

197215
type: SpeciesReference
stoichiometry: 2.0
species: 232372

197251
type: SpeciesReference
stoichiometry: 2.0
species: 232520

197167
type: SpeciesReference
stoichiometry: 2.0
species: 232612

197179
type: SpeciesReference
stoichiometry: 2.0
species: 231573

197155
type: SpeciesReference
stoichiometry: 1.0
species: 232262

197203
type: SpeciesReference
stoichiometry: 1.0
species: 231566

233492
type: Reaction
product: 217330
reactant: 217318
fast: false
reversible: true
name: 5.1.3.2

217330
type: SpeciesReference
stoichiometry: 1.0
species: 232635

217318
type: SpeciesReference
stoichiometry: 1.0
species: 232663

233737
type: Reaction
product: 223808
fast: false
reversible: true
name: Exchange: (Folate)

223808
type: SpeciesReference
stoichiometry: 1.0
species: 231645

233144
type: Reaction
product: 209042
product: 209030
reactant: 209018
reactant: 209006
reactant: 208993
fast: false
reversible: false
name: 3-Methyl-2-oxopentanoate:lipoamide oxidoreductase(decarboxylating

209042
type: SpeciesReference
stoichiometry: 1.0
species: 231518

209030
type: SpeciesReference
stoichiometry: 1.0
species: 232340

209018
type: SpeciesReference
stoichiometry: 1.0
species: 232520

209006
type: SpeciesReference
stoichiometry: 1.0
species: 231377

208993
type: SpeciesReference
stoichiometry: 1.0
species: 231374

234113
type: Reaction
product: 233394
product: 233382
product: 233370
reactant: 233358
reactant: 233346
fast: false
reversible: false
name: XMP:pyrophosphate phosphoribosyltransferase

233394
type: SpeciesReference
stoichiometry: 1.0
species: 232520

233382
type: SpeciesReference
stoichiometry: 1.0
species: 231513

233370
type: SpeciesReference
stoichiometry: 1.0
species: 231398

233358
type: SpeciesReference
stoichiometry: 1.0
species: 231310

233346
type: SpeciesReference
stoichiometry: 1.0
species: 232034

233416
type: Reaction
product: 216000
reactant: 215988
reactant: 215976
fast: false
reversible: true
name: ATP:AMP phosphotransferase

216000
type: SpeciesReference
stoichiometry: 2.0
species: 231605

215988
type: SpeciesReference
stoichiometry: 1.0
species: 232396

215976
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233857
type: Reaction
product: 226784
fast: false
reversible: true
name: Exchange: (Acetate)

226784
type: SpeciesReference
stoichiometry: 1.0
species: 231686

233800
type: Reaction
product: 225236
product: 225224
reactant: 225212
reactant: 225200
fast: false
reversible: true
name: 10-Formyltetrahydrofolate:5'-phosphoribosyl-5-amino-4-

225236
type: SpeciesReference
stoichiometry: 1.0
species: 232046

225224
type: SpeciesReference
stoichiometry: 1.0
species: 231397

225212
type: SpeciesReference
stoichiometry: 1.0
species: 231630

225200
type: SpeciesReference
stoichiometry: 1.0
species: 231425

233604
type: Reaction
product: 220545
product: 220533
product: 220521
reactant: 220509
reactant: 220497
fast: false
reversible: true
name: (3S)-3-Hydroxyacyl-CoA:NAD+ oxidoreductase

220545
type: SpeciesReference
stoichiometry: 1.0
species: 232520

220533
type: SpeciesReference
stoichiometry: 1.0
species: 231589

220521
type: SpeciesReference
stoichiometry: 1.0
species: 232604

220509
type: SpeciesReference
stoichiometry: 1.0
species: 231593

220497
type: SpeciesReference
stoichiometry: 1.0
species: 231321

233509
type: Reaction
product: 217825
product: 217813
reactant: 217801
fast: false
reversible: true
name: 3-Isopropylmalate hydro-lyase

217825
type: SpeciesReference
stoichiometry: 1.0
species: 231570

217813
type: SpeciesReference
stoichiometry: 1.0
species: 232656

217801
type: SpeciesReference
stoichiometry: 1.0
species: 231514

233381
type: Reaction
product: 215371
product: 215359
reactant: 215347
reactant: 215335
fast: false
reversible: true
name: Symport: (Deoxycytidine:H+)

215371
type: SpeciesReference
stoichiometry: 1.0
species: 232520

215359
type: SpeciesReference
stoichiometry: 1.0
species: 232447

215347
type: SpeciesReference
stoichiometry: 1.0
species: 232166

215335
type: SpeciesReference
stoichiometry: 1.0
species: 232026

233960
type: Reaction
product: 228740
product: 228728
reactant: 228716
reactant: 228704
fast: false
reversible: false
name: Isopentyl phosphate kinase

228740
type: SpeciesReference
stoichiometry: 1.0
species: 231605

228728
type: SpeciesReference
stoichiometry: 1.0
species: 231458

228716
type: SpeciesReference
stoichiometry: 1.0
species: 231573

228704
type: SpeciesReference
stoichiometry: 1.0
species: 232210

233153
type: Reaction
product: 209307
fast: false
reactant: 209271
reversible: true
product: 209331
reactant: 209283
name: L-Glutamate-5-semialdehyde:NADP+ 5-oxidoreductase (phosphorylationg)
product: 209319
reactant: 209295

209307
type: SpeciesReference
stoichiometry: 1.0
species: 232202

209271
type: SpeciesReference
stoichiometry: 1.0
species: 231406

209331
type: SpeciesReference
stoichiometry: 1.0
species: 231597

209283
type: SpeciesReference
stoichiometry: 1.0
species: 231598

209319
type: SpeciesReference
stoichiometry: 1.0
species: 231609

209295
type: SpeciesReference
stoichiometry: 1.0
species: 232520

232855
type: Reaction
product: 200508
product: 200496
product: 200484
reactant: 200472
fast: false
reversible: false
name: L-threonine ammonia-lyase

200508
type: SpeciesReference
stoichiometry: 1.0
species: 232520

200496
type: SpeciesReference
stoichiometry: 1.0
species: 231545

200484
type: SpeciesReference
stoichiometry: 1.0
species: 231362

200472
type: SpeciesReference
stoichiometry: 1.0
species: 232255

233020
type: Reaction
product: 205306
product: 205294
reactant: 205282
reactant: 205270
fast: false
reversible: false
name: Acetate:CoA ligase (AMP-forming)

205306
type: SpeciesReference
stoichiometry: 1.0
species: 232588

205294
type: SpeciesReference
stoichiometry: 1.0
species: 231513

205282
type: SpeciesReference
stoichiometry: 1.0
species: 232463

205270
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232722
type: Reaction
product: 196793
product: 196781
reactant: 196769
reactant: 196757
fast: false
reversible: false
name: 2.7.7.63

196793
type: SpeciesReference
stoichiometry: 1.0
species: 232175

196781
type: SpeciesReference
stoichiometry: 1.0
species: 231513

196769
type: SpeciesReference
stoichiometry: 1.0
species: 232548

196757
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233248
type: Reaction
product: 211940
product: 211928
reactant: 211916
reactant: 211904
fast: false
reversible: true
name: Symport: (L-Aspartate:H+)

211940
type: SpeciesReference
stoichiometry: 1.0
species: 232520

211928
type: SpeciesReference
stoichiometry: 1.0
species: 232243

211916
type: SpeciesReference
stoichiometry: 1.0
species: 232166

211904
type: SpeciesReference
stoichiometry: 1.0
species: 231970

233724
type: Reaction
product: 223482
fast: false
reversible: true
name: Exchange: (K+)

223482
type: SpeciesReference
stoichiometry: 1.0
species: 232427

233012
type: Reaction
product: 205125
product: 205113
reactant: 205101
reactant: 205089
reactant: 205077
fast: false
reversible: true
name: L-Histidinol-phosphate phosphohydrolase

205125
type: SpeciesReference
stoichiometry: 1.0
species: 231609

205113
type: SpeciesReference
stoichiometry: 1.0
species: 232344

232344
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Histidinol

205101
type: SpeciesReference
stoichiometry: 1.0
species: 232520

205089
type: SpeciesReference
stoichiometry: 1.0
species: 231570

205077
type: SpeciesReference
stoichiometry: 1.0
species: 231829

232864
type: Reaction
product: 200767
product: 200755
reactant: 200743
reactant: 200731
fast: false
reversible: false
name: 4-Aminobutanoate:2-oxoglutarate aminotransferase

200767
type: SpeciesReference
stoichiometry: 1.0
species: 232372

200755
type: SpeciesReference
stoichiometry: 1.0
species: 231429

200743
type: SpeciesReference
stoichiometry: 1.0
species: 232375

200731
type: SpeciesReference
stoichiometry: 1.0
species: 231793

232965
type: Reaction
product: 203822
fast: false
reversible: true
name: Exchange: (Hypoxanthine)

203822
type: SpeciesReference
stoichiometry: 1.0
species: 232159

231934
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: (3S)-Citryl-CoA

232731
type: Reaction
product: 197094
reversible: false
fast: false
product: 197070
reactant: 197034
name: 2.8.1.8
reactant: 197046
reactant: 197058
product: 197082

197094
type: SpeciesReference
stoichiometry: 2.0
species: 231969

197070
type: SpeciesReference
stoichiometry: 1.0
species: 232182

197034
type: SpeciesReference
stoichiometry: 1.0
species: 232395

197046
type: SpeciesReference
stoichiometry: 2.0
species: 232500

197058
type: SpeciesReference
stoichiometry: 2.0
species: 231549

197082
type: SpeciesReference
stoichiometry: 2.0
species: 232668

233961
type: Reaction
product: 228800
product: 228788
reactant: 228776
reactant: 228764
reactant: 228752
fast: false
reversible: false
name: MJ0601 Ma2851 Reaction

228800
type: SpeciesReference
stoichiometry: 1.0
species: 231589

228788
type: SpeciesReference
stoichiometry: 1.0
species: 232118

228776
type: SpeciesReference
stoichiometry: 1.0
species: 232520

228764
type: SpeciesReference
stoichiometry: 1.0
species: 231593

228752
type: SpeciesReference
stoichiometry: 1.0
species: 232154

233948
type: Reaction
product: 228400
fast: false
reversible: true
name: Exchange: (Manganese)

228400
type: SpeciesReference
stoichiometry: 1.0
species: 231682

234241
type: Reaction
product: 237014
product: 237002
product: 236990
reactant: 236978
reactant: 236966
fast: false
reversible: false
name: Nicotinate-nucleotide:dimethylbenzimidazole

237014
type: SpeciesReference
stoichiometry: 1.0
species: 232520

237002
type: SpeciesReference
stoichiometry: 1.0
species: 231985

236990
type: SpeciesReference
stoichiometry: 1.0
species: 231345

236978
type: SpeciesReference
stoichiometry: 1.0
species: 231694

236966
type: SpeciesReference
stoichiometry: 1.0
species: 232111

233125
type: Reaction
product: 208446
product: 208434
product: 208422
reactant: 208410
reactant: 208398
fast: false
reversible: false
name: 2.7.1.50

208446
type: SpeciesReference
stoichiometry: 1.0
species: 232520

208434
type: SpeciesReference
stoichiometry: 1.0
species: 231485

208422
type: SpeciesReference
stoichiometry: 1.0
species: 231605

208410
type: SpeciesReference
stoichiometry: 1.0
species: 232431

208398
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233589
type: Reaction
product: 220135
product: 220099
reactant: 220086
product: 220111
reactant: 220062
fast: false
reactant: 220074
reversible: false
product: 220123
name: Presqualene diphosphate:farnesyl-diphosphate farnesyltransferase

220135
type: SpeciesReference
stoichiometry: 1.0
species: 232520

220099
type: SpeciesReference
stoichiometry: 1.0
species: 231513

220086
type: SpeciesReference
stoichiometry: 1.0
species: 232520

220111
type: SpeciesReference
stoichiometry: 1.0
species: 232379

220062
type: SpeciesReference
stoichiometry: 1.0
species: 231601

220074
type: SpeciesReference
stoichiometry: 1.0
species: 231598

220123
type: SpeciesReference
stoichiometry: 1.0
species: 231597

233913
type: Reaction
product: 227857
fast: false
reversible: true
name: Exchange: (Glycerol 1-p)

227857
type: SpeciesReference
stoichiometry: 1.0
species: 231562

233336
type: Reaction
product: 214348
fast: false
reversible: true
name: Exchange: (L-Tyrosine)

214348
type: SpeciesReference
stoichiometry: 1.0
species: 232045

233885
type: Reaction
product: 227254
fast: false
reversible: true
name: Exchange (Molybdenum)

227254
type: SpeciesReference
stoichiometry: 1.0
species: 231750

233072
type: Reaction
product: 206514
product: 206490
product: 206502
product: 206477
reversible: false
reactant: 206453
fast: false
reactant: 206465
name: 6,7-Dimethyl-8-(1-D-ribityl)lumazine:6,7-dimethyl-8-(1-D-ribityl)

206514
type: SpeciesReference
stoichiometry: 1.0
species: 232520

206490
type: SpeciesReference
stoichiometry: 1.0
species: 231609

206502
type: SpeciesReference
stoichiometry: 2.0
species: 231570

206477
type: SpeciesReference
stoichiometry: 1.0
species: 231405

206453
type: SpeciesReference
stoichiometry: 1.0
species: 232053

206465
type: SpeciesReference
stoichiometry: 1.0
species: 231773

234020
type: Reaction
product: 230342
product: 230330
reactant: 230318
fast: false
reversible: false
name: 2.8.1.7

230342
type: SpeciesReference
stoichiometry: 1.0
species: 232291

230330
type: SpeciesReference
stoichiometry: 1.0
species: 231882

230318
type: SpeciesReference
stoichiometry: 1.0
species: 232567

233657
type: Reaction
product: 221916
product: 221904
product: 221892
reactant: 221880
reactant: 221868
fast: false
reversible: true
name: Shikimate:NADP+ 5-oxidoreductase

221916
type: SpeciesReference
stoichiometry: 1.0
species: 232520

221904
type: SpeciesReference
stoichiometry: 1.0
species: 231598

221892
type: SpeciesReference
stoichiometry: 1.0
species: 232687

221880
type: SpeciesReference
stoichiometry: 1.0
species: 231597

221868
type: SpeciesReference
stoichiometry: 1.0
species: 231862

232802
type: Reaction
product: 199025
product: 199013
product: 199001
reactant: 198989
reactant: 198977
fast: false
reversible: false
name: ATP phosphohydrolase (protein-secreting)

199025
type: SpeciesReference
stoichiometry: 1.0
species: 232520

199013
type: SpeciesReference
stoichiometry: 1.0
species: 231609

199001
type: SpeciesReference
stoichiometry: 1.0
species: 231605

198989
type: SpeciesReference
stoichiometry: 1.0
species: 231570

198977
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233769
type: Reaction
product: 224531
reactant: 224495
product: 224543
reversible: false
fast: false
reactant: 224519
reactant: 224507
product: 224555
name: L-Malate glyoxylate-lyase (CoA-acetylating)

224531
type: SpeciesReference
stoichiometry: 1.0
species: 232515

224495
type: SpeciesReference
stoichiometry: 1.0
species: 232407

224543
type: SpeciesReference
stoichiometry: 1.0
species: 231517

224519
type: SpeciesReference
stoichiometry: 1.0
species: 232250

224507
type: SpeciesReference
stoichiometry: 1.0
species: 231570

224555
type: SpeciesReference
stoichiometry: 1.0
species: 232520

234248
type: Reaction
product: 237243
product: 237231
product: 237219
reactant: 237207
reactant: 237195
fast: false
reversible: true
name: 1.1.1.261

237243
type: SpeciesReference
stoichiometry: 1.0
species: 232520

237231
type: SpeciesReference
stoichiometry: 1.0
species: 231589

237219
type: SpeciesReference
stoichiometry: 1.0
species: 231349

237207
type: SpeciesReference
stoichiometry: 1.0
species: 231593

237195
type: SpeciesReference
stoichiometry: 1.0
species: 231441

232778
type: Reaction
product: 198351
reactant: 198339
reactant: 198327
fast: false
reversible: false
name: (3S)-Citryl-CoA oxaloacetate-lyase

198351
type: SpeciesReference
stoichiometry: 1.0
species: 231934

198339
type: SpeciesReference
stoichiometry: 1.0
species: 232419

198327
type: SpeciesReference
stoichiometry: 1.0
species: 232407

233641
type: Reaction
product: 221505
reactant: 221493
fast: false
reversible: true
name: D-Ribose 1,5-phosphomutase

221505
type: SpeciesReference
stoichiometry: 1.0
species: 231314

221493
type: SpeciesReference
stoichiometry: 1.0
species: 231450

233333
type: Reaction
product: 214336
product: 214323
reactant: 214311
reactant: 214298
fast: false
reversible: true
name: S-Adenosyl-L-homocysteine hydrolase

214336
type: SpeciesReference
stoichiometry: 1.0
species: 232539

214323
type: SpeciesReference
stoichiometry: 1.0
species: 231509

214311
type: SpeciesReference
stoichiometry: 1.0
species: 231570

214298
type: SpeciesReference
stoichiometry: 1.0
species: 232412

234213
type: Reaction
product: 236277
product: 236264
product: 236252
reactant: 236240
reactant: 236228
fast: false
reversible: false
name: Geranylgeranyl diphosphate:sn-glyceryl phosphate

236277
type: SpeciesReference
stoichiometry: 1.0
species: 232520

236264
type: SpeciesReference
stoichiometry: 1.0
species: 231658

236252
type: SpeciesReference
stoichiometry: 1.0
species: 231513

236240
type: SpeciesReference
stoichiometry: 1.0
species: 231441

236228
type: SpeciesReference
stoichiometry: 1.0
species: 231877

233185
type: Reaction
product: 210229
product: 210217
reactant: 210204
reactant: 210192
fast: false
reversible: true
name: ATP:nucleoside-phosphate phosphotransferase

210229
type: SpeciesReference
stoichiometry: 1.0
species: 231542

210217
type: SpeciesReference
stoichiometry: 1.0
species: 231605

210204
type: SpeciesReference
stoichiometry: 1.0
species: 231370

210192
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232977
type: Reaction
product: 204063
product: 204051
reactant: 204039
fast: false
reversible: true
name: D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate hydro-lyase

204063
type: SpeciesReference
stoichiometry: 1.0
species: 231570

204051
type: SpeciesReference
stoichiometry: 1.0
species: 231845

204039
type: SpeciesReference
stoichiometry: 1.0
species: 231654

233200
type: Reaction
product: 210619
product: 210607
reactant: 210595
reactant: 210583
fast: false
reversible: true
name: Symport: (Glycine:H+)

210619
type: SpeciesReference
stoichiometry: 1.0
species: 232520

210607
type: SpeciesReference
stoichiometry: 1.0
species: 232420

210595
type: SpeciesReference
stoichiometry: 1.0
species: 232166

210583
type: SpeciesReference
stoichiometry: 1.0
species: 231662

232783
type: Reaction
reactant: 198471
product: 198483
name: L-Aspartic acid:oxygen oxidoreductase (deaminating)
reactant: 198459
fast: false
reversible: false
product: 198495
product: 198519
product: 198507
reactant: 198447

198471
type: SpeciesReference
stoichiometry: 1.0
species: 231606

198483
type: SpeciesReference
stoichiometry: 1.0
species: 232419

198459
type: SpeciesReference
stoichiometry: 1.0
species: 231570

198495
type: SpeciesReference
stoichiometry: 1.0
species: 231545

198519
type: SpeciesReference
stoichiometry: 1.0
species: 232520

198507
type: SpeciesReference
stoichiometry: 1.0
species: 232368

198447
type: SpeciesReference
stoichiometry: 1.0
species: 232243

233481
type: Reaction
product: 217184
fast: false
reversible: true
name: Exchange: (L-Methionine)

217184
type: SpeciesReference
stoichiometry: 1.0
species: 231842

233781
type: Reaction
product: 224873
product: 224860
reactant: 224847
reactant: 224834
fast: false
reversible: false
name: (S)-2-Aceto-2-hydroxybutanoate pyruvate-lyase (carboxylating)

224873
type: SpeciesReference
stoichiometry: 1.0
species: 232623

224860
type: SpeciesReference
stoichiometry: 1.0
species: 232443

224847
type: SpeciesReference
stoichiometry: 1.0
species: 232258

224834
type: SpeciesReference
stoichiometry: 1.0
species: 231362

233405
type: Reaction
product: 215843
fast: false
reversible: true
name: Exchange: (L-Serine)

215843
type: SpeciesReference
stoichiometry: 1.0
species: 231901

233253
type: Reaction
product: 212085
product: 212073
reactant: 212061
reactant: 212048
fast: false
reversible: true
name: 3.5.4.1

212085
type: SpeciesReference
stoichiometry: 1.0
species: 231545

212073
type: SpeciesReference
stoichiometry: 1.0
species: 232659

212061
type: SpeciesReference
stoichiometry: 1.0
species: 231570

212048
type: SpeciesReference
stoichiometry: 1.0
species: 232531

232531
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: 5-Methylcytosine

234100
type: Reaction
product: 232757
product: 232745
product: 232733
reactant: 232720
reactant: 232682
fast: false
reversible: true
name: 1.8.1.4

232757
type: SpeciesReference
stoichiometry: 1.0
species: 232520

232745
type: SpeciesReference
stoichiometry: 1.0
species: 232400

232733
type: SpeciesReference
stoichiometry: 1.0
species: 231589

232720
type: SpeciesReference
stoichiometry: 1.0
species: 232174

232682
type: SpeciesReference
stoichiometry: 1.0
species: 231593

234209
type: Reaction
product: 236142
product: 236130
reactant: 236118
reactant: 236106
fast: false
reversible: true
name: ATP:3-phospho-D-glycerate 1-phosphotransferase

236142
type: SpeciesReference
stoichiometry: 1.0
species: 231421

236130
type: SpeciesReference
stoichiometry: 1.0
species: 231605

236118
type: SpeciesReference
stoichiometry: 1.0
species: 232323

236106
type: SpeciesReference
stoichiometry: 1.0
species: 231573

234057
type: Reaction
fast: false
name: ABC-T: (Dipeptide)
product: 231651
reactant: 231615
reactant: 231603
reactant: 231627
product: 231639
product: 231675
product: 231663
reversible: false

231651
type: SpeciesReference
stoichiometry: 1.0
species: 231605

231615
type: SpeciesReference
stoichiometry: 1.0
species: 231573

231603
type: SpeciesReference
stoichiometry: 1.0
species: 231650

231650
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Dipeptide (E)

231627
type: SpeciesReference
stoichiometry: 1.0
species: 231570

231639
type: SpeciesReference
stoichiometry: 1.0
species: 231358

231675
type: SpeciesReference
stoichiometry: 1.0
species: 232520

231663
type: SpeciesReference
stoichiometry: 1.0
species: 231609

232964
type: Reaction
fast: false
product: 203810
reversible: false
reactant: 203738
product: 203798
name: L-Serine:tRNA(Ser) ligase (AMP-forming)
reactant: 203750
product: 203774
product: 203786
reactant: 203762

203810
type: SpeciesReference
stoichiometry: 1.0
species: 232520

203738
type: SpeciesReference
stoichiometry: 1.0
species: 231573

203798
type: SpeciesReference
stoichiometry: 1.0
species: 232299

203750
type: SpeciesReference
stoichiometry: 1.0
species: 232624

203774
type: SpeciesReference
stoichiometry: 1.0
species: 232396

203786
type: SpeciesReference
stoichiometry: 1.0
species: 231513

203762
type: SpeciesReference
stoichiometry: 1.0
species: 232524

234101
type: Reaction
product: 232793
reactant: 232781
reactant: 232769
fast: false
reversible: false
name: beta-Carotene:oxygen 15,15'-oxidoreductase (bond-cleaving)

232793
type: SpeciesReference
stoichiometry: 2.0
species: 231978

232781
type: SpeciesReference
stoichiometry: 1.0
species: 231606

232769
type: SpeciesReference
stoichiometry: 1.0
species: 232620

233757
type: Reaction
product: 224266
reactant: 224254
fast: false
reversible: true
name: N-(5'-Phospho-D-ribosylformimino)-5-amino-1-

224266
type: SpeciesReference
stoichiometry: 1.0
species: 232018

224254
type: SpeciesReference
stoichiometry: 1.0
species: 231869

233001
type: Reaction
fast: false
name: 6.1.1.4
reactant: 204744
product: 204794
reactant: 204732
product: 204781
product: 204768
reactant: 204756
reversible: false
product: 204807

204744
type: SpeciesReference
stoichiometry: 1.0
species: 231502

204794
type: SpeciesReference
stoichiometry: 1.0
species: 232440

232440
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: L-Leucyl-tRNA

204732
type: SpeciesReference
stoichiometry: 1.0
species: 231573

204781
type: SpeciesReference
stoichiometry: 1.0
species: 231513

204768
type: SpeciesReference
stoichiometry: 1.0
species: 232396

204756
type: SpeciesReference
stoichiometry: 1.0
species: 232628

204807
type: SpeciesReference
stoichiometry: 1.0
species: 232520

233833
type: Reaction
product: 226203
product: 226191
reactant: 226179
reactant: 226167
fast: false
reversible: true
name: 2.7.7.62

226203
type: SpeciesReference
stoichiometry: 1.0
species: 231513

226191
type: SpeciesReference
stoichiometry: 1.0
species: 231546

226179
type: SpeciesReference
stoichiometry: 1.0
species: 232283

226167
type: SpeciesReference
stoichiometry: 1.0
species: 231553

233500
type: Reaction
product: 217547
product: 217534
reactant: 217522
reactant: 217510
fast: false
reversible: true
name: ATP:(d)GMP phosphotransferase

217547
type: SpeciesReference
stoichiometry: 1.0
species: 231930

217534
type: SpeciesReference
stoichiometry: 1.0
species: 231605

217522
type: SpeciesReference
stoichiometry: 1.0
species: 231942

217510
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232973
type: Reaction
product: 204015
fast: false
reversible: true
name: Exchange: (Uridine)

204015
type: SpeciesReference
stoichiometry: 1.0
species: 232037

233624
type: Reaction
product: 221035
reactant: 221023
reactant: 221011
fast: false
reversible: true
name: (S)-Malate hydro-lyase

221035
type: SpeciesReference
stoichiometry: 1.0
species: 232515

221023
type: SpeciesReference
stoichiometry: 1.0
species: 231570

221011
type: SpeciesReference
stoichiometry: 1.0
species: 231501

233229
type: Reaction
product: 211482
product: 211470
reactant: 211458
reactant: 211445
reactant: 211433
fast: false
reversible: false
name: NADPH:oxidized-thioredoxin oxidoreductase

211482
type: SpeciesReference
stoichiometry: 1.0
species: 231597

211470
type: SpeciesReference
stoichiometry: 1.0
species: 231821

211458
type: SpeciesReference
stoichiometry: 1.0
species: 232520

211445
type: SpeciesReference
stoichiometry: 1.0
species: 231598

211433
type: SpeciesReference
stoichiometry: 1.0
species: 231818

233956
type: Reaction
product: 228607
product: 228595
reactant: 228582
reactant: 228570
fast: false
reversible: false
name: AMP phosphorylase (rib-pp forming)

228607
type: SpeciesReference
stoichiometry: 1.0
species: 232519

228595
type: SpeciesReference
stoichiometry: 1.0
species: 232154

228582
type: SpeciesReference
stoichiometry: 1.0
species: 231609

228570
type: SpeciesReference
stoichiometry: 1.0
species: 232396

234152
type: Reaction
product: 234656
reactant: 234644
fast: false
reversible: false
name: Influx Diffusion: (H+)

234656
type: SpeciesReference
stoichiometry: 1.0
species: 232520

234644
type: SpeciesReference
stoichiometry: 1.0
species: 232042

232179
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: BM: Amino acids (OD ml)

234161
type: Reaction
reversible: false
fast: false
name: ABC-T: (Magnesium)
reactant: 234875
product: 234899
product: 234887
product: 234911
reactant: 234863
product: 234923
reactant: 234851

234875
type: SpeciesReference
stoichiometry: 1.0
species: 231570

234899
type: SpeciesReference
stoichiometry: 1.0
species: 231605

234887
type: SpeciesReference
stoichiometry: 1.0
species: 231678

234911
type: SpeciesReference
stoichiometry: 1.0
species: 231609

234863
type: SpeciesReference
stoichiometry: 1.0
species: 231573

234923
type: SpeciesReference
stoichiometry: 1.0
species: 232520

234851
type: SpeciesReference
stoichiometry: 1.0
species: 232484

232718
type: Reaction
product: 196709
product: 196697
product: 196685
reactant: 196673
reactant: 196661
fast: false
reversible: false
name: 2.7.7.63

196709
type: SpeciesReference
stoichiometry: 1.0
species: 232520

196697
type: SpeciesReference
stoichiometry: 1.0
species: 232396

196685
type: SpeciesReference
stoichiometry: 1.0
species: 232171

196673
type: SpeciesReference
stoichiometry: 1.0
species: 232025

196661
type: SpeciesReference
stoichiometry: 1.0
species: 232175

233353
type: Reaction
product: 214708
product: 214696
product: 214684
reactant: 214672
reactant: 214660
fast: false
reversible: true
name: Phosphoribosyl-ATP pyrophosphohydrolase

214708
type: SpeciesReference
stoichiometry: 2.0
species: 232520

214696
type: SpeciesReference
stoichiometry: 1.0
species: 231513

214684
type: SpeciesReference
stoichiometry: 1.0
species: 232286

214672
type: SpeciesReference
stoichiometry: 1.0
species: 231570

214660
type: SpeciesReference
stoichiometry: 1.0
species: 232432

232183
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: BM: S-layer glyco (OD ml)

232835
type: Reaction
product: 199942
product: 199930
product: 199918
reactant: 199906
reactant: 199894
fast: false
reversible: false
name: Dimethylallyl-diphosphate:isopentenyl-diphosphate

199942
type: SpeciesReference
stoichiometry: 1.0
species: 232520

199930
type: SpeciesReference
stoichiometry: 1.0
species: 231809

199918
type: SpeciesReference
stoichiometry: 1.0
species: 231513

199906
type: SpeciesReference
stoichiometry: 1.0
species: 231458

199894
type: SpeciesReference
stoichiometry: 1.0
species: 231422

233560
type: Reaction
product: 219323
product: 219311
product: 219299
reactant: 219287
reactant: 219275
fast: false
reversible: true
name: ATP:L-aspartate 4-phosphotransferase

219323
type: SpeciesReference
stoichiometry: 1.0
species: 232520

219311
type: SpeciesReference
stoichiometry: 1.0
species: 231437

219299
type: SpeciesReference
stoichiometry: 1.0
species: 231605

219287
type: SpeciesReference
stoichiometry: 1.0
species: 232243

219275
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233220
type: Reaction
product: 211214
product: 211202
product: 211190
reactant: 211178
reactant: 211166
fast: false
reversible: false
name: 2'-Deoxyguanosine 5'-diphosphate:oxidized-thioredoxin

211214
type: SpeciesReference
stoichiometry: 1.0
species: 231570

211202
type: SpeciesReference
stoichiometry: 1.0
species: 231818

211190
type: SpeciesReference
stoichiometry: 1.0
species: 231930

211178
type: SpeciesReference
stoichiometry: 1.0
species: 231821

211166
type: SpeciesReference
stoichiometry: 1.0
species: 232467

232911
type: Reaction
product: 202218
reactant: 202182
product: 202230
reactant: 202206
product: 202254
reactant: 202170
name: UTP:ammonia ligase(ADP-forming)
reactant: 202194
fast: false
product: 202242
reversible: false
product: 202266

202218
type: SpeciesReference
stoichiometry: 1.0
species: 231605

202182
type: SpeciesReference
stoichiometry: 1.0
species: 232675

202230
type: SpeciesReference
stoichiometry: 1.0
species: 231609

202206
type: SpeciesReference
stoichiometry: 1.0
species: 231570

202254
type: SpeciesReference
stoichiometry: 1.0
species: 232372

202170
type: SpeciesReference
stoichiometry: 1.0
species: 231573

202194
type: SpeciesReference
stoichiometry: 1.0
species: 232612

202242
type: SpeciesReference
stoichiometry: 1.0
species: 232608

202266
type: SpeciesReference
stoichiometry: 2.0
species: 232520

232702
type: Reaction
product: 196266
reactant: 196254
fast: false
reversible: true
name: LL-2,6-Diaminoheptanedioate 2-epimerase

196266
type: SpeciesReference
stoichiometry: 1.0
species: 231850

196254
type: SpeciesReference
stoichiometry: 1.0
species: 231922

233704
type: Reaction
product: 223014
product: 223002
product: 222990
reactant: 222978
reactant: 222965
fast: false
reversible: false
name: ATP:GTP 3'-pyrophosphotransferase

223014
type: SpeciesReference
stoichiometry: 1.0
species: 232520

223002
type: SpeciesReference
stoichiometry: 1.0
species: 231830

222990
type: SpeciesReference
stoichiometry: 1.0
species: 232396

222978
type: SpeciesReference
stoichiometry: 1.0
species: 232283

222965
type: SpeciesReference
stoichiometry: 1.0
species: 231573

234244
type: Reaction
name: L-Glutamate:NADP+ oxidoreductase (deaminating)
product: 237098
reversible: true
product: 237062
fast: false
reactant: 237050
reactant: 237026
reactant: 237038
product: 237086
product: 237074

237098
type: SpeciesReference
stoichiometry: 2.0
species: 232520

237062
type: SpeciesReference
stoichiometry: 1.0
species: 232375

237050
type: SpeciesReference
stoichiometry: 1.0
species: 231570

237026
type: SpeciesReference
stoichiometry: 1.0
species: 232372

237038
type: SpeciesReference
stoichiometry: 1.0
species: 231597

237086
type: SpeciesReference
stoichiometry: 1.0
species: 231598

237074
type: SpeciesReference
stoichiometry: 1.0
species: 231545

232892
type: Reaction
product: 201625
product: 201613
reactant: 201564
reactant: 201540
product: 201589
fast: false
reactant: 201528
reactant: 201552
reversible: false
product: 201601
product: 201577
name: L-aspartate:L-glutamine amido-ligase (AMP-forming)

201625
type: SpeciesReference
stoichiometry: 3.0
species: 232520

201613
type: SpeciesReference
stoichiometry: 1.0
species: 232372

201564
type: SpeciesReference
stoichiometry: 1.0
species: 231570

201540
type: SpeciesReference
stoichiometry: 1.0
species: 232243

201589
type: SpeciesReference
stoichiometry: 1.0
species: 231513

201528
type: SpeciesReference
stoichiometry: 1.0
species: 231573

201552
type: SpeciesReference
stoichiometry: 1.0
species: 232612

201601
type: SpeciesReference
stoichiometry: 1.0
species: 232527

201577
type: SpeciesReference
stoichiometry: 1.0
species: 232396

233309
type: Reaction
product: 213538
reactant: 213526
fast: false
reversible: true
name: alpha-D-Glucose 1-phosphate 1,6-phosphomutase

213538
type: SpeciesReference
stoichiometry: 1.0
species: 231917

213526
type: SpeciesReference
stoichiometry: 1.0
species: 231369

232822
type: Reaction
product: 199568
product: 199556
reactant: 199544
reactant: 199532
reactant: 199520
fast: false
reversible: true
name: 2.5.1.48

199568
type: SpeciesReference
stoichiometry: 1.0
species: 232567

199556
type: SpeciesReference
stoichiometry: 1.0
species: 232049

199544
type: SpeciesReference
stoichiometry: 1.0
species: 232520

199532
type: SpeciesReference
stoichiometry: 1.0
species: 232287

199520
type: SpeciesReference
stoichiometry: 1.0
species: 231822

233304
type: Reaction
product: 213430
reactant: 213418
fast: false
reversible: true
name: D-Mannose 6-phosphate 1,6-phosphomutase

213430
type: SpeciesReference
stoichiometry: 1.0
species: 231489

213418
type: SpeciesReference
stoichiometry: 1.0
species: 232664

233048
type: Reaction
product: 205728
name: L-Aspartate:tRNAAsp ligase (AMP-forming)
product: 205716
reactant: 205680
product: 205704
reversible: false
product: 205692
reactant: 205656
fast: false
reactant: 205668

205728
type: SpeciesReference
stoichiometry: 1.0
species: 232520

205716
type: SpeciesReference
stoichiometry: 1.0
species: 231582

205680
type: SpeciesReference
stoichiometry: 1.0
species: 232699

205704
type: SpeciesReference
stoichiometry: 1.0
species: 231513

205692
type: SpeciesReference
stoichiometry: 1.0
species: 232396

205656
type: SpeciesReference
stoichiometry: 1.0
species: 231573

205668
type: SpeciesReference
stoichiometry: 1.0
species: 232243

234065
type: Reaction
product: 231979
fast: false
reversible: true
name: Exchange: (Adenosine)

231979
type: SpeciesReference
stoichiometry: 1.0
species: 232311

233541
type: Reaction
product: 218839
product: 218827
reactant: 218815
reactant: 218803
fast: false
reversible: true
name: L-Aspartate-4-semialdehyde hydro-lyase (adding pyruvate and

218839
type: SpeciesReference
stoichiometry: 2.0
species: 231570

218827
type: SpeciesReference
stoichiometry: 1.0
species: 231954

218815
type: SpeciesReference
stoichiometry: 1.0
species: 232411

218803
type: SpeciesReference
stoichiometry: 1.0
species: 231669

233496
type: Reaction
product: 217426
product: 217414
reactant: 217402
reactant: 217390
fast: false
reversible: true
name: ATP:nucleoside-diphosphate phosphatransferase

217426
type: SpeciesReference
stoichiometry: 1.0
species: 232511

232511
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231307
name: ITP

217414
type: SpeciesReference
stoichiometry: 1.0
species: 231605

217402
type: SpeciesReference
stoichiometry: 1.0
species: 231373

217390
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233013
type: Reaction
product: 205185
product: 205173
product: 205161
reactant: 205149
reactant: 205137
fast: false
reversible: true
name: L-Histidinol:NAD+ oxidoreductase

205185
type: SpeciesReference
stoichiometry: 2.0
species: 232520

205173
type: SpeciesReference
stoichiometry: 1.0
species: 231589

205161
type: SpeciesReference
stoichiometry: 1.0
species: 232021

205149
type: SpeciesReference
stoichiometry: 1.0
species: 231593

205137
type: SpeciesReference
stoichiometry: 1.0
species: 232344

233528
type: Reaction
product: 218393
product: 218381
reactant: 218369
reactant: 218357
fast: false
reversible: true
name: Symport: (Acetate:H+)

218393
type: SpeciesReference
stoichiometry: 1.0
species: 232520

218381
type: SpeciesReference
stoichiometry: 1.0
species: 232463

218369
type: SpeciesReference
stoichiometry: 1.0
species: 232166

218357
type: SpeciesReference
stoichiometry: 1.0
species: 231686

233093
type: Reaction
reactant: 207144
reactant: 207252
reactant: 207192
reactant: 207240
reactant: 207276
fast: false
reactant: 207228
reactant: 207180
reactant: 207216
reversible: false
reactant: 207108
reactant: 207168
reactant: 207204
reactant: 207324
reactant: 207156
reactant: 207132
reactant: 207095
name: Growth: Protein
reactant: 207312
reactant: 207120
reactant: 207288
reactant: 207264
reactant: 207300
product: 207336

207144
type: SpeciesReference
stoichiometry: 107.76
species: 232683

207252
type: SpeciesReference
stoichiometry: 110.12
species: 232612

207192
type: SpeciesReference
stoichiometry: 97.7
species: 232247

207240
type: SpeciesReference
stoichiometry: 159.82
species: 232512

207276
type: SpeciesReference
stoichiometry: 148.08
species: 232624

207228
type: SpeciesReference
stoichiometry: 81.42
species: 232527

207180
type: SpeciesReference
stoichiometry: 121.33
species: 231506

207216
type: SpeciesReference
stoichiometry: 55.06
species: 232668

207108
type: SpeciesReference
stoichiometry: 24.82
species: 232567

207168
type: SpeciesReference
stoichiometry: 46.48
species: 231410

207204
type: SpeciesReference
stoichiometry: 210.08
species: 231502

207324
type: SpeciesReference
stoichiometry: 74.12
species: 232516

207156
type: SpeciesReference
stoichiometry: 249.99
species: 232420

207132
type: SpeciesReference
stoichiometry: 368.67
species: 232372

207095
type: SpeciesReference
stoichiometry: 248.21
species: 232291

207312
type: SpeciesReference
stoichiometry: 33.73
species: 232679

207120
type: SpeciesReference
stoichiometry: 325.68
species: 232243

207288
type: SpeciesReference
stoichiometry: 185.04
species: 232255

207264
type: SpeciesReference
stoichiometry: 168.82
species: 232619

207300
type: SpeciesReference
stoichiometry: 213.87
species: 232254

207336
type: SpeciesReference
stoichiometry: 1.0
species: 232179

233964
type: Reaction
product: 228865
product: 228852
product: 228839
reactant: 228826
reactant: 228813
fast: false
reversible: true
name: Carbamoyl-phosphate:L-ornithine carbamoyltransferase

228865
type: SpeciesReference
stoichiometry: 1.0
species: 232520

228852
type: SpeciesReference
stoichiometry: 1.0
species: 231758

228839
type: SpeciesReference
stoichiometry: 1.0
species: 231609

228826
type: SpeciesReference
stoichiometry: 1.0
species: 232676

228813
type: SpeciesReference
stoichiometry: 1.0
species: 232648

233465
type: Reaction
product: 216854
fast: false
reversible: true
name: Exchange: (L-Arginine)

216854
type: SpeciesReference
stoichiometry: 1.0
species: 231905

233356
type: Reaction
product: 214720
fast: false
reversible: true
name: Free: (CO2)

214720
type: SpeciesReference
stoichiometry: 1.0
species: 231762

234261
type: Reaction
product: 237605
reactant: 237544
reactant: 237568
name: L-Glutamate:ammonia ligase (ADP-forming)
reactant: 237556
product: 237593
product: 237580
reversible: false
fast: false

237605
type: SpeciesReference
stoichiometry: 1.0
species: 232612

237544
type: SpeciesReference
stoichiometry: 1.0
species: 231573

237568
type: SpeciesReference
stoichiometry: 1.0
species: 231545

237556
type: SpeciesReference
stoichiometry: 1.0
species: 232372

237593
type: SpeciesReference
stoichiometry: 1.0
species: 231609

237580
type: SpeciesReference
stoichiometry: 1.0
species: 231605

233476
type: Reaction
product: 217088
product: 217076
reactant: 217064
fast: false
reversible: true
name: 4.2.1.18

217088
type: SpeciesReference
stoichiometry: 1.0
species: 231570

217076
type: SpeciesReference
stoichiometry: 1.0
species: 232001

217064
type: SpeciesReference
stoichiometry: 1.0
species: 231913

234037
type: Reaction
product: 230804
product: 230791
reactant: 230779
reactant: 230767
fast: false
reversible: true
name: Symport: (Adenine:H+)

230804
type: SpeciesReference
stoichiometry: 1.0
species: 232520

230791
type: SpeciesReference
stoichiometry: 1.0
species: 232519

230779
type: SpeciesReference
stoichiometry: 1.0
species: 232166

230767
type: SpeciesReference
stoichiometry: 1.0
species: 231782

231782
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 231308
name: Adenine (E)

233128
type: Reaction
product: 208506
product: 208494
reactant: 208482
reactant: 208470
reactant: 208458
fast: false
reversible: true
name: L-Proline:NADP+ 5-oxidoreductase

208506
type: SpeciesReference
stoichiometry: 1.0
species: 231597

208494
type: SpeciesReference
stoichiometry: 1.0
species: 232512

208482
type: SpeciesReference
stoichiometry: 2.0
species: 232520

208470
type: SpeciesReference
stoichiometry: 1.0
species: 231598

208458
type: SpeciesReference
stoichiometry: 1.0
species: 231757

233580
type: Reaction
product: 219845
product: 219833
reactant: 219820
reactant: 219808
fast: false
reversible: false
name: Tetradecanoyl-CoA:(acceptor) 2,3-oxidoreductase

219845
type: SpeciesReference
stoichiometry: 1.0
species: 231914

219833
type: SpeciesReference
stoichiometry: 1.0
species: 231701

219820
type: SpeciesReference
stoichiometry: 1.0
species: 231538

219808
type: SpeciesReference
stoichiometry: 1.0
species: 231541

234156
type: Reaction
product: 234742
product: 234729
reactant: 234716
fast: false
reversible: false
name: Hydorogen-peroxide:hydrogen-peroxide oxidoreductase

234742
type: SpeciesReference
stoichiometry: 2.0
species: 231570

234729
type: SpeciesReference
stoichiometry: 1.0
species: 231606

234716
type: SpeciesReference
stoichiometry: 2.0
species: 232368

233605
type: Reaction
product: 220605
product: 220593
reactant: 220581
reactant: 220569
reactant: 220557
fast: false
reversible: true
name: 1-(5-Phospho-D-ribosyl)-ATP:pyrophosphate phosphoribosyl-transferase

220605
type: SpeciesReference
stoichiometry: 1.0
species: 231310

220593
type: SpeciesReference
stoichiometry: 1.0
species: 231573

220581
type: SpeciesReference
stoichiometry: 1.0
species: 232520

220569
type: SpeciesReference
stoichiometry: 1.0
species: 231513

220557
type: SpeciesReference
stoichiometry: 1.0
species: 232432

233365
type: Reaction
product: 214973
product: 214961
reactant: 214949
fast: false
reversible: false
name: 4.2.1.-

214973
type: SpeciesReference
stoichiometry: 1.0
species: 231570

214961
type: SpeciesReference
stoichiometry: 1.0
species: 232464

214949
type: SpeciesReference
stoichiometry: 1.0
species: 231637

232707
type: Reaction
product: 196400
reactant: 196387
fast: false
reversible: true
name: alpha-D-Glucose 6-phosphate ketol-isomerase

196400
type: SpeciesReference
stoichiometry: 1.0
species: 232082

196387
type: SpeciesReference
stoichiometry: 1.0
species: 231917

233112
type: Reaction
product: 208038
product: 208026
product: 208014
reactant: 208002
reactant: 207990
fast: false
reversible: false
name: Growth: Energy

208038
type: SpeciesReference
stoichiometry: 1.0
species: 232239

208026
type: SpeciesReference
stoichiometry: 1.0
species: 231609

208014
type: SpeciesReference
stoichiometry: 1.0
species: 231605

208002
type: SpeciesReference
stoichiometry: 1.0
species: 231570

207990
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233080
type: Reaction
product: 206708
product: 206696
reactant: 206684
reactant: 206671
fast: false
reversible: true
name: 1.5.1.5

206708
type: SpeciesReference
stoichiometry: 1.0
species: 231598

206696
type: SpeciesReference
stoichiometry: 1.0
species: 231673

206684
type: SpeciesReference
stoichiometry: 1.0
species: 231597

206671
type: SpeciesReference
stoichiometry: 1.0
species: 232479

233709
type: Reaction
product: 223182
product: 223170
reactant: 223158
reactant: 223146
fast: false
reversible: false
name: 2.3.1.-

223182
type: SpeciesReference
stoichiometry: 1.0
species: 231981

223170
type: SpeciesReference
stoichiometry: 1.0
species: 231490

223158
type: SpeciesReference
stoichiometry: 1.0
species: 231517

223146
type: SpeciesReference
stoichiometry: 1.0
species: 231465

232944
type: Reaction
product: 203291
product: 203278
reactant: 203266
reactant: 203254
fast: false
reversible: false
name: 3.1.3.12

203291
type: SpeciesReference
stoichiometry: 1.0
species: 231609

203278
type: SpeciesReference
stoichiometry: 1.0
species: 232360

203266
type: SpeciesReference
stoichiometry: 1.0
species: 231570

203254
type: SpeciesReference
stoichiometry: 1.0
species: 231802

233829
type: Reaction
product: 226094
product: 226082
product: 226070
reactant: 226058
reactant: 226046
fast: false
reversible: true
name: 2.7.1.156

226094
type: SpeciesReference
stoichiometry: 1.0
species: 232520

226082
type: SpeciesReference
stoichiometry: 1.0
species: 231605

226070
type: SpeciesReference
stoichiometry: 1.0
species: 231553

226058
type: SpeciesReference
stoichiometry: 1.0
species: 231573

226046
type: SpeciesReference
stoichiometry: 1.0
species: 231554

233932
type: Reaction
product: 228183
product: 228171
product: 228159
reactant: 228147
reactant: 228135
fast: false
reversible: true
name: (S)-Hydroxyhexanoyl-CoA:NAD+ oxidoreductase

228183
type: SpeciesReference
stoichiometry: 1.0
species: 232520

228171
type: SpeciesReference
stoichiometry: 1.0
species: 231589

228159
type: SpeciesReference
stoichiometry: 1.0
species: 232123

228147
type: SpeciesReference
stoichiometry: 1.0
species: 231593

228135
type: SpeciesReference
stoichiometry: 1.0
species: 232126

233129
type: Reaction
product: 208554
name: Oxid Phos: C I (NADH)
product: 208566
reversible: false
reactant: 208530
fast: false
reactant: 208518
product: 208578
reactant: 208542

208554
type: SpeciesReference
stoichiometry: 1.0
species: 231593

208566
type: SpeciesReference
stoichiometry: 1.0
species: 231642

208530
type: SpeciesReference
stoichiometry: 1.0
species: 232547

208518
type: SpeciesReference
stoichiometry: 1.0
species: 231589

208578
type: SpeciesReference
stoichiometry: 4.0
species: 232166

208542
type: SpeciesReference
stoichiometry: 5.0
species: 232520

233684
type: Reaction
product: 222518
fast: false
reversible: true
name: Exchange: (Biotin)

222518
type: SpeciesReference
stoichiometry: 1.0
species: 231722

234093
type: Reaction
product: 232414
product: 232402
reactant: 232390
reactant: 232378
reactant: 232366
fast: false
reversible: false
name: 2.2.1.6

232414
type: SpeciesReference
stoichiometry: 1.0
species: 231518

232402
type: SpeciesReference
stoichiometry: 1.0
species: 232258

232390
type: SpeciesReference
stoichiometry: 1.0
species: 232520

232378
type: SpeciesReference
stoichiometry: 1.0
species: 232623

232366
type: SpeciesReference
stoichiometry: 1.0
species: 232411

233289
type: Reaction
product: 213142
reactant: 213130
reactant: 213118
product: 213166
reactant: 213094
reactant: 213106
reversible: false
name: Archaeol Synthesis
product: 213154
fast: false

213142
type: SpeciesReference
stoichiometry: 1.0
species: 231906

213130
type: SpeciesReference
stoichiometry: 8.0
species: 232520

213118
type: SpeciesReference
stoichiometry: 8.0
species: 231598

213166
type: SpeciesReference
stoichiometry: 8.0
species: 231597

213094
type: SpeciesReference
stoichiometry: 1.0
species: 231414

213106
type: SpeciesReference
stoichiometry: 1.0
species: 231570

213154
type: SpeciesReference
stoichiometry: 1.0
species: 231609

234136
type: Reaction
product: 234327
product: 234314
reversible: false
product: 234289
fast: false
reactant: 234047
reactant: 234265
reactant: 234277
product: 234301
name: L-Citrulline:L-aspartate ligase (AMP-forming)

234327
type: SpeciesReference
stoichiometry: 2.0
species: 232520

234314
type: SpeciesReference
stoichiometry: 1.0
species: 232371

234289
type: SpeciesReference
stoichiometry: 1.0
species: 232396

234047
type: SpeciesReference
stoichiometry: 1.0
species: 231573

234265
type: SpeciesReference
stoichiometry: 1.0
species: 231758

234277
type: SpeciesReference
stoichiometry: 1.0
species: 232243

234301
type: SpeciesReference
stoichiometry: 1.0
species: 231513

234256
type: Reaction
product: 237424
product: 237412
reactant: 237400
reactant: 237388
fast: false
reversible: true
name: Chorismate:L-glutamine amido-ligase

237424
type: SpeciesReference
stoichiometry: 1.0
species: 232372

237412
type: SpeciesReference
stoichiometry: 1.0
species: 232383

237400
type: SpeciesReference
stoichiometry: 1.0
species: 232612

237388
type: SpeciesReference
stoichiometry: 1.0
species: 231337

233889
type: Reaction
product: 227302
fast: false
reversible: true
name: Exchange: (Pyruvate)

227302
type: SpeciesReference
stoichiometry: 1.0
species: 231733

232786
type: Reaction
product: 198579
reversible: false
product: 198592
product: 198604
fast: false
name: 6.1.1.1
reactant: 198543
product: 198567
reactant: 198531
reactant: 198555

198579
type: SpeciesReference
stoichiometry: 1.0
species: 231513

198592
type: SpeciesReference
stoichiometry: 1.0
species: 232238

198604
type: SpeciesReference
stoichiometry: 1.0
species: 232520

198543
type: SpeciesReference
stoichiometry: 1.0
species: 232516

198567
type: SpeciesReference
stoichiometry: 1.0
species: 232396

198531
type: SpeciesReference
stoichiometry: 1.0
species: 231573

198555
type: SpeciesReference
stoichiometry: 1.0
species: 232234

233676
type: Reaction
reactant: 222373
fast: false
reversible: true
product: 222433
reactant: 222397
name: Succinate:CoA ligase (ADP-forming)
product: 222421
product: 222409
reactant: 222385

222373
type: SpeciesReference
stoichiometry: 1.0
species: 231573

222433
type: SpeciesReference
stoichiometry: 1.0
species: 232568

222397
type: SpeciesReference
stoichiometry: 1.0
species: 231517

222421
type: SpeciesReference
stoichiometry: 1.0
species: 231609

222409
type: SpeciesReference
stoichiometry: 1.0
species: 231605

222385
type: SpeciesReference
stoichiometry: 1.0
species: 232287

233448
type: Reaction
product: 216583
reactant: 216571
fast: false
reversible: false
name: Diffusion: (Cl-)

216583
type: SpeciesReference
stoichiometry: 1.0
species: 232010

216571
type: SpeciesReference
stoichiometry: 1.0
species: 231865

232806
type: Reaction
product: 199146
product: 199134
product: 199122
reactant: 199110
fast: false
reversible: false
name: ATP pyrophosphate-lyase (cyclizing)

199146
type: SpeciesReference
stoichiometry: 1.0
species: 232520

199134
type: SpeciesReference
stoichiometry: 1.0
species: 231513

199122
type: SpeciesReference
stoichiometry: 1.0
species: 231977

199110
type: SpeciesReference
stoichiometry: 1.0
species: 231573

232811
type: Reaction
product: 199302
product: 199290
reactant: 199278
reactant: 199266
reactant: 199254
fast: false
reversible: true
name: Orotidine-5'-phosphate:pyrophosphate phosphoribosyltransferase

199302
type: SpeciesReference
stoichiometry: 1.0
species: 231310

199290
type: SpeciesReference
stoichiometry: 1.0
species: 232555

199278
type: SpeciesReference
stoichiometry: 1.0
species: 232520

199266
type: SpeciesReference
stoichiometry: 1.0
species: 231513

199254
type: SpeciesReference
stoichiometry: 1.0
species: 231825

232830
type: Reaction
product: 199786
product: 199774
reactant: 199762
reactant: 199750
fast: false
reversible: false
name: Xanthosine 5'-phosphate phosphohydrolase

199786
type: SpeciesReference
stoichiometry: 1.0
species: 231609

199774
type: SpeciesReference
stoichiometry: 1.0
species: 232491

199762
type: SpeciesReference
stoichiometry: 1.0
species: 231570

199750
type: SpeciesReference
stoichiometry: 1.0
species: 231398

232759
type: Reaction
product: 197962
product: 197950
product: 197938
reactant: 197926
reactant: 197914
fast: false
reversible: false
name: 2.5.1.11

197962
type: SpeciesReference
stoichiometry: 1.0
species: 232520

197950
type: SpeciesReference
stoichiometry: 1.0
species: 231513

197938
type: SpeciesReference
stoichiometry: 1.0
species: 232388

197926
type: SpeciesReference
stoichiometry: 1.0
species: 231458

197914
type: SpeciesReference
stoichiometry: 1.0
species: 232070

232931
type: Reaction
name: 1.2.7.3
product: 202821
reactant: 202785
reactant: 202809
reactant: 202797
reversible: true
product: 202833
fast: false
product: 202845

202821
type: SpeciesReference
stoichiometry: 1.0
species: 231402

202785
type: SpeciesReference
stoichiometry: 1.0
species: 231413

202809
type: SpeciesReference
stoichiometry: 1.0
species: 231517

202797
type: SpeciesReference
stoichiometry: 1.0
species: 232375

202833
type: SpeciesReference
stoichiometry: 1.0
species: 232568

202845
type: SpeciesReference
stoichiometry: 1.0
species: 231518

234137
type: Reaction
product: 234376
product: 234364
reactant: 234352
reactant: 234340
fast: false
reversible: true
name: UTP:alpha-D-glucose-1-phosphate uridylyltransferase

234376
type: SpeciesReference
stoichiometry: 1.0
species: 232384

234364
type: SpeciesReference
stoichiometry: 1.0
species: 231513

234352
type: SpeciesReference
stoichiometry: 1.0
species: 231369

234340
type: SpeciesReference
stoichiometry: 1.0
species: 232675

233337
type: Reaction
product: 214360
fast: false
reversible: true
name: Free: (H2O)

214360
type: SpeciesReference
stoichiometry: 1.0
species: 231794

233413
type: Reaction
product: 215964
fast: false
reversible: true
name: Exchange: (Nitrate)

215964
type: SpeciesReference
stoichiometry: 1.0
species: 232099

233628
type: Reaction
product: 221155
product: 221143
product: 221131
reactant: 221119
reactant: 221107
fast: false
reversible: false
name: ATP:(R)-mevalonate 5-phosphotransferase

221155
type: SpeciesReference
stoichiometry: 1.0
species: 232520

221143
type: SpeciesReference
stoichiometry: 1.0
species: 231817

221131
type: SpeciesReference
stoichiometry: 1.0
species: 231605

221119
type: SpeciesReference
stoichiometry: 1.0
species: 231550

221107
type: SpeciesReference
stoichiometry: 1.0
species: 231573

234004
type: Reaction
product: 229956
product: 229943
product: 229931
reactant: 229918
reactant: 229906
fast: false
reversible: false
name: Shikimate synth. reaction

229956
type: SpeciesReference
stoichiometry: 1.0
species: 231657

229943
type: SpeciesReference
stoichiometry: 1.0
species: 231593

229931
type: SpeciesReference
stoichiometry: 1.0
species: 231609

229918
type: SpeciesReference
stoichiometry: 1.0
species: 231589

229906
type: SpeciesReference
stoichiometry: 1.0
species: 232150

233388
type: Reaction
product: 215554
product: 215542
product: 215530
reactant: 215517
fast: false
reversible: true
name: 4-amino-4-deoxychorismate pyruvate-lyase

215554
type: SpeciesReference
stoichiometry: 1.0
species: 232520

215542
type: SpeciesReference
stoichiometry: 1.0
species: 232411

215530
type: SpeciesReference
stoichiometry: 1.0
species: 231941

215517
type: SpeciesReference
stoichiometry: 1.0
species: 232383

233204
type: Reaction
product: 210753
reactant: 210703
fast: false
product: 210765
reactant: 210691
reactant: 210715
product: 210740
product: 210728
reactant: 210679
reversible: false
name: 3-Oxopropanoate:NAD+ oxidoreductase (decarboxylating,

210753
type: SpeciesReference
stoichiometry: 1.0
species: 231589

210703
type: SpeciesReference
stoichiometry: 1.0
species: 231593

210765
type: SpeciesReference
stoichiometry: 1.0
species: 232520

210691
type: SpeciesReference
stoichiometry: 1.0
species: 231517

210715
type: SpeciesReference
stoichiometry: 1.0
species: 232520

210740
type: SpeciesReference
stoichiometry: 1.0
species: 231518

210728
type: SpeciesReference
stoichiometry: 1.0
species: 232407

210679
type: SpeciesReference
stoichiometry: 1.0
species: 231474

232787
type: Reaction
product: 198664
product: 198652
product: 198640
reactant: 198628
reactant: 198616
fast: false
reversible: false
name: Guanine aminohydrolase

198664
type: SpeciesReference
stoichiometry: 1.0
species: 232520

198652
type: SpeciesReference
stoichiometry: 1.0
species: 231545

198640
type: SpeciesReference
stoichiometry: 1.0
species: 232034

198628
type: SpeciesReference
stoichiometry: 1.0
species: 231570

198616
type: SpeciesReference
stoichiometry: 1.0
species: 231390

233880
type: Reaction
product: 227218
reactant: 227205
fast: false
reversible: false
name: ThiC

227218
type: SpeciesReference
stoichiometry: 1.0
species: 231770

227205
type: SpeciesReference
stoichiometry: 1.0
species: 231470

233485
type: Reaction
product: 217209
fast: false
reversible: true
name: Exchange: (L-Lysine)

217209
type: SpeciesReference
stoichiometry: 1.0
species: 231974

233984
type: Reaction
product: 229387
product: 229375
reactant: 229363
reactant: 229350
reactant: 229338
fast: false
reversible: false
name: D-Glycerate:NADP+ 2-oxidoreductase

229387
type: SpeciesReference
stoichiometry: 1.0
species: 231593

229375
type: SpeciesReference
stoichiometry: 1.0
species: 231322

229363
type: SpeciesReference
stoichiometry: 1.0
species: 232520

229350
type: SpeciesReference
stoichiometry: 1.0
species: 231589

229338
type: SpeciesReference
stoichiometry: 1.0
species: 232640

232803
type: Reaction
name: 1.3.99.22
product: 199073
reversible: true
product: 199098
product: 199061
reactant: 199037
product: 199086
fast: false
reactant: 199049

199073
type: SpeciesReference
stoichiometry: 2.0
species: 231518

199098
type: SpeciesReference
stoichiometry: 2.0
species: 231969

199061
type: SpeciesReference
stoichiometry: 1.0
species: 232266

199037
type: SpeciesReference
stoichiometry: 1.0
species: 231317

199086
type: SpeciesReference
stoichiometry: 2.0
species: 232668

199049
type: SpeciesReference
stoichiometry: 2.0
species: 231549

233272
type: Reaction
product: 212616
product: 212604
reactant: 212592
reactant: 212580
fast: false
reversible: false
name: Uridine 5'-monophosphate phosphohydrolase

212616
type: SpeciesReference
stoichiometry: 1.0
species: 231609

212604
type: SpeciesReference
stoichiometry: 1.0
species: 232544

212592
type: SpeciesReference
stoichiometry: 1.0
species: 231570

212580
type: SpeciesReference
stoichiometry: 1.0
species: 231370

233177
type: Reaction
product: 210012
reactant: 210000
reactant: 209988
fast: false
reversible: false
name: (2S,3S)-3-Hydroxy-2-methylbutanoyl-CoA hydro-liase

210012
type: SpeciesReference
stoichiometry: 1.0
species: 231594

210000
type: SpeciesReference
stoichiometry: 1.0
species: 231570

209988
type: SpeciesReference
stoichiometry: 1.0
species: 231950

233517
type: Reaction
reversible: false
product: 218127
reactant: 218079
reactant: 218067
name: Acetaldehyde:NAD+ oxidoreductase
fast: false
product: 218115
reactant: 218091
product: 218103

218127
type: SpeciesReference
stoichiometry: 2.0
species: 232520

218079
type: SpeciesReference
stoichiometry: 1.0
species: 231593

218067
type: SpeciesReference
stoichiometry: 1.0
species: 232508

218115
type: SpeciesReference
stoichiometry: 1.0
species: 231589

218091
type: SpeciesReference
stoichiometry: 1.0
species: 231570

218103
type: SpeciesReference
stoichiometry: 1.0
species: 232463

233637
type: Reaction
product: 221421
product: 221409
product: 221397
reactant: 221385
reactant: 221373
fast: false
reversible: false
name: ATP:L-homoserine O-phosphotransferase

221421
type: SpeciesReference
stoichiometry: 1.0
species: 232520

221409
type: SpeciesReference
stoichiometry: 1.0
species: 231837

221397
type: SpeciesReference
stoichiometry: 1.0
species: 231605

221385
type: SpeciesReference
stoichiometry: 1.0
species: 232607

221373
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233044
type: Reaction
product: 205632
fast: false
reversible: true
name: Exchange: (Cytosine)

205632
type: SpeciesReference
stoichiometry: 1.0
species: 232083

232739
type: Reaction
reactant: 197299
product: 197323
product: 197360
reversible: true
reactant: 197287
fast: false
product: 197336
reactant: 197311
name: 2.1.1.-
product: 197348

197299
type: SpeciesReference
stoichiometry: 1.0
species: 231549

197323
type: SpeciesReference
stoichiometry: 1.0
species: 231741

197360
type: SpeciesReference
stoichiometry: 2.0
species: 232520

197287
type: SpeciesReference
stoichiometry: 1.0
species: 231754

197336
type: SpeciesReference
stoichiometry: 1.0
species: 232412

197311
type: SpeciesReference
stoichiometry: 1.0
species: 231570

197348
type: SpeciesReference
stoichiometry: 1.0
species: 232508

233993
type: Reaction
product: 229712
product: 229700
reactant: 229688
reactant: 229676
reactant: 229663
fast: false
reversible: false
name: MJ0400 homolog reaction

229712
type: SpeciesReference
stoichiometry: 1.0
species: 232206

229700
type: SpeciesReference
stoichiometry: 1.0
species: 231313

229688
type: SpeciesReference
stoichiometry: 1.0
species: 232520

229676
type: SpeciesReference
stoichiometry: 1.0
species: 232199

229663
type: SpeciesReference
stoichiometry: 1.0
species: 231669

233860
type: Reaction
product: 226844
product: 226832
product: 226820
reactant: 226808
reactant: 226796
fast: false
reversible: false
name: Acetyl-CoA hydrolase

226844
type: SpeciesReference
stoichiometry: 1.0
species: 232520

226832
type: SpeciesReference
stoichiometry: 1.0
species: 232463

226820
type: SpeciesReference
stoichiometry: 1.0
species: 231517

226808
type: SpeciesReference
stoichiometry: 1.0
species: 231570

226796
type: SpeciesReference
stoichiometry: 1.0
species: 232407

232888
type: Reaction
product: 201468
product: 201456
reactant: 201444
reactant: 201432
fast: false
reversible: false
name: L-O-Phosphoserine phosphohydrolase

201468
type: SpeciesReference
stoichiometry: 1.0
species: 231609

201456
type: SpeciesReference
stoichiometry: 1.0
species: 232624

201444
type: SpeciesReference
stoichiometry: 1.0
species: 231570

201432
type: SpeciesReference
stoichiometry: 1.0
species: 232038

233765
type: Reaction
product: 224458
product: 224446
reactant: 224434
reactant: 224422
fast: false
reversible: true
name: 4.1.1.81

224458
type: SpeciesReference
stoichiometry: 1.0
species: 231518

224446
type: SpeciesReference
stoichiometry: 1.0
species: 232480

224434
type: SpeciesReference
stoichiometry: 2.0
species: 232520

224422
type: SpeciesReference
stoichiometry: 1.0
species: 231633

233608
type: Reaction
product: 220642
product: 220630
reactant: 220617
fast: false
reversible: true
name: beta-D-Fructose 1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase

220642
type: SpeciesReference
stoichiometry: 1.0
species: 231313

220630
type: SpeciesReference
stoichiometry: 1.0
species: 231349

220617
type: SpeciesReference
stoichiometry: 1.0
species: 231873

232730
type: Reaction
product: 197022
product: 197010
product: 196998
reactant: 196986
reactant: 196974
fast: false
reversible: false
name: 2.7.1.15

197022
type: SpeciesReference
stoichiometry: 1.0
species: 232520

197010
type: SpeciesReference
stoichiometry: 1.0
species: 231605

196998
type: SpeciesReference
stoichiometry: 1.0
species: 231997

196986
type: SpeciesReference
stoichiometry: 1.0
species: 231573

196974
type: SpeciesReference
stoichiometry: 1.0
species: 232054

233512
type: Reaction
fast: false
product: 217910
product: 217886
product: 217898
reactant: 217838
reactant: 217862
reversible: false
name: Neurosporene, hydrogen-donor:oxygen oxidoreductase
reactant: 217874
reactant: 217850

217910
type: SpeciesReference
stoichiometry: 1.0
species: 231597

217886
type: SpeciesReference
stoichiometry: 1.0
species: 232170

217898
type: SpeciesReference
stoichiometry: 2.0
species: 231570

217838
type: SpeciesReference
stoichiometry: 1.0
species: 232163

217862
type: SpeciesReference
stoichiometry: 1.0
species: 231598

217874
type: SpeciesReference
stoichiometry: 1.0
species: 232520

217850
type: SpeciesReference
stoichiometry: 1.0
species: 231606

233596
type: Reaction
product: 220292
product: 220280
reactant: 220268
reactant: 220256
reactant: 220244
fast: false
reversible: true
name: N-(5-Phospho-D-ribosyl)anthranilate:pyrophosphate

220292
type: SpeciesReference
stoichiometry: 1.0
species: 231310

220280
type: SpeciesReference
stoichiometry: 1.0
species: 231366

220268
type: SpeciesReference
stoichiometry: 1.0
species: 232520

220256
type: SpeciesReference
stoichiometry: 1.0
species: 231513

220244
type: SpeciesReference
stoichiometry: 1.0
species: 231365

232755
type: Reaction
product: 197854
product: 197842
product: 197830
reactant: 197818
reactant: 197806
fast: false
reversible: false
name: 2.5.1.33

197854
type: SpeciesReference
stoichiometry: 1.0
species: 232520

197842
type: SpeciesReference
stoichiometry: 1.0
species: 231513

197830
type: SpeciesReference
stoichiometry: 1.0
species: 231989

197818
type: SpeciesReference
stoichiometry: 1.0
species: 231458

197806
type: SpeciesReference
stoichiometry: 1.0
species: 232073

233237
type: Reaction
product: 211688
product: 211675
product: 211663
reactant: 211651
reactant: 211639
fast: false
reversible: false
name: 2'-Deoxyuridine 5'-diphosphate:oxidized-thioredoxin

211688
type: SpeciesReference
stoichiometry: 1.0
species: 231570

211675
type: SpeciesReference
stoichiometry: 1.0
species: 231818

211663
type: SpeciesReference
stoichiometry: 1.0
species: 232079

211651
type: SpeciesReference
stoichiometry: 1.0
species: 231542

211639
type: SpeciesReference
stoichiometry: 1.0
species: 231821

234168
type: Reaction
product: 235093
product: 235080
reactant: 235068
reactant: 235056
fast: false
reversible: true
name: Symport: (Fumarate:H+)

235093
type: SpeciesReference
stoichiometry: 1.0
species: 232520

235080
type: SpeciesReference
stoichiometry: 1.0
species: 231501

235068
type: SpeciesReference
stoichiometry: 1.0
species: 232166

235056
type: SpeciesReference
stoichiometry: 1.0
species: 231718

232949
type: Reaction
product: 203435
product: 203423
reactant: 203411
reactant: 203399
fast: false
reversible: false
name: Glycine:lipoylprotein oxidoreductase (decarboxylating and

203435
type: SpeciesReference
stoichiometry: 1.0
species: 231518

203423
type: SpeciesReference
stoichiometry: 1.0
species: 231949

203411
type: SpeciesReference
stoichiometry: 1.0
species: 232400

203399
type: SpeciesReference
stoichiometry: 1.0
species: 232420

233852
type: Reaction
product: 226649
product: 226637
reactant: 226625
reactant: 226613
reactant: 226601
fast: false
reversible: true
name: 1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide:pyrophosphate

226649
type: SpeciesReference
stoichiometry: 1.0
species: 231310

226637
type: SpeciesReference
stoichiometry: 1.0
species: 232684

226625
type: SpeciesReference
stoichiometry: 1.0
species: 232520

226613
type: SpeciesReference
stoichiometry: 1.0
species: 231513

226601
type: SpeciesReference
stoichiometry: 1.0
species: 231630

234164
type: Reaction
product: 234972
product: 234960
reactant: 234947
reactant: 234935
fast: false
reversible: true
name: Symport: (Citrate:H+)

234972
type: SpeciesReference
stoichiometry: 1.0
species: 232520

234960
type: SpeciesReference
stoichiometry: 1.0
species: 232571

234947
type: SpeciesReference
stoichiometry: 1.0
species: 232166

234935
type: SpeciesReference
stoichiometry: 1.0
species: 231746

233504
type: Reaction
product: 217645
product: 217633
reactant: 217621
reactant: 217609
fast: false
reversible: true
name: ATP:nucleoside-diphosphate phosphatransferase

217645
type: SpeciesReference
stoichiometry: 1.0
species: 231725

217633
type: SpeciesReference
stoichiometry: 1.0
species: 231605

217621
type: SpeciesReference
stoichiometry: 1.0
species: 231938

217609
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233937
type: Reaction
product: 228267
product: 228255
product: 228243
reactant: 228231
reactant: 228219
fast: false
reversible: true
name: (S)-Hydroxyoctanoyl-CoA:NAD+ oxidoreductase

228267
type: SpeciesReference
stoichiometry: 1.0
species: 232520

228255
type: SpeciesReference
stoichiometry: 1.0
species: 231589

228243
type: SpeciesReference
stoichiometry: 1.0
species: 232127

228231
type: SpeciesReference
stoichiometry: 1.0
species: 231593

228219
type: SpeciesReference
stoichiometry: 1.0
species: 232134

233016
type: Reaction
product: 205198
fast: false
reversible: true
name: Exchange: (Adenine)

205198
type: SpeciesReference
stoichiometry: 1.0
species: 231782

233096
type: Reaction
reactant: 207372
reactant: 207360
fast: false
reactant: 207408
product: 207444
reversible: false
reactant: 207396
reactant: 207432
reactant: 207348
reactant: 207384
name: Growth: (Assemble)
reactant: 207420

207372
type: SpeciesReference
stoichiometry: 1.0
species: 232194

207360
type: SpeciesReference
stoichiometry: 1.0
species: 232183

207408
type: SpeciesReference
stoichiometry: 1.0
species: 232235

207444
type: SpeciesReference
stoichiometry: 1.0
species: 232198

207396
type: SpeciesReference
stoichiometry: 1.0
species: 232186

207432
type: SpeciesReference
stoichiometry: 1.0
species: 232239

207348
type: SpeciesReference
stoichiometry: 1.0
species: 232179

207384
type: SpeciesReference
stoichiometry: 1.0
species: 232191

207420
type: SpeciesReference
stoichiometry: 1.0
species: 232190

233513
type: Reaction
product: 217970
product: 217958
product: 217946
reactant: 217934
reactant: 217922
fast: false
reversible: false
name: 4.1.99.-

217970
type: SpeciesReference
stoichiometry: 1.0
species: 231609

217958
type: SpeciesReference
stoichiometry: 2.0
species: 231570

217946
type: SpeciesReference
stoichiometry: 1.0
species: 232274

217934
type: SpeciesReference
stoichiometry: 1.0
species: 231349

217922
type: SpeciesReference
stoichiometry: 1.0
species: 232295

233361
type: Reaction
product: 214852
fast: false
reversible: true
name: Free: (Oxygen)

214852
type: SpeciesReference
stoichiometry: 1.0
species: 231774

232826
type: Reaction
product: 199664
product: 199652
reactant: 199640
reactant: 199628
fast: false
reversible: true
name: ATP:nucleoside-diphosphate phosphatransferase

199664
type: SpeciesReference
stoichiometry: 1.0
species: 231925

199652
type: SpeciesReference
stoichiometry: 1.0
species: 231605

199640
type: SpeciesReference
stoichiometry: 1.0
species: 232079

199628
type: SpeciesReference
stoichiometry: 1.0
species: 231573

234245
type: Reaction
reactant: 237122
reversible: true
reactant: 237110
name: 5-Phospho-D-ribosylamine:glycine ligase (ADP-forming)
product: 237170
fast: false
reactant: 237134
product: 237183
product: 237146
product: 237158

237122
type: SpeciesReference
stoichiometry: 1.0
species: 232580

237110
type: SpeciesReference
stoichiometry: 1.0
species: 231573

237170
type: SpeciesReference
stoichiometry: 1.0
species: 231521

237134
type: SpeciesReference
stoichiometry: 1.0
species: 232420

237183
type: SpeciesReference
stoichiometry: 1.0
species: 232520

237146
type: SpeciesReference
stoichiometry: 1.0
species: 231605

237158
type: SpeciesReference
stoichiometry: 1.0
species: 231609

233061
type: Reaction
product: 206114
product: 206101
reactant: 206089
reactant: 206077
fast: false
reversible: true
name: ATP:CMP phosphotransferase

206114
type: SpeciesReference
stoichiometry: 1.0
species: 231350

206101
type: SpeciesReference
stoichiometry: 1.0
species: 231605

206089
type: SpeciesReference
stoichiometry: 1.0
species: 232351

206077
type: SpeciesReference
stoichiometry: 1.0
species: 231573

233665
type: Reaction
product: 222156
product: 222144
product: 222132
reactant: 222120
reactant: 222108
fast: false
reversible: true
name: 3-Hydroxy-2-methylpropanoate:NAD+ oxidoreductase

222156
type: SpeciesReference
stoichiometry: 1.0
species: 232520

222144
type: SpeciesReference
stoichiometry: 1.0
species: 231589

222132
type: SpeciesReference
stoichiometry: 1.0
species: 232455

222120
type: SpeciesReference
stoichiometry: 1.0
species: 231593

222108
type: SpeciesReference
stoichiometry: 1.0
species: 232452

233100
type: Reaction
reversible: false
fast: false
product: 207577
name: Growth: S-layer glyco
reactant: 207553
reactant: 207541
product: 207589
reactant: 207565
reactant: 207529

207577
type: SpeciesReference
stoichiometry: 4.44
species: 231609

207553
type: SpeciesReference
stoichiometry: 9.61
species: 231454

207541
type: SpeciesReference
stoichiometry: 9.61
species: 232456

207589
type: SpeciesReference
stoichiometry: 1.0
species: 232183

207565
type: SpeciesReference
stoichiometry: 20.7
species: 232310

207529
type: SpeciesReference
stoichiometry: 4.44
species: 231902

234237
type: Reaction
product: 236905
product: 236893
reactant: 236881
reactant: 236869
fast: false
reversible: true
name: L-Isoleucine:2-oxoglutarate aminotransferase

236905
type: SpeciesReference
stoichiometry: 1.0
species: 232372

236893
type: SpeciesReference
stoichiometry: 1.0
species: 232451

236881
type: SpeciesReference
stoichiometry: 1.0
species: 232375

236869
type: SpeciesReference
stoichiometry: 1.0
species: 231506

232915
type: Reaction
product: 202374
product: 202362
reactant: 202350
reactant: 202338
fast: false
reversible: true
name: L-Arginine carboxy-lyase

202374
type: SpeciesReference
stoichiometry: 1.0
species: 231518

202362
type: SpeciesReference
stoichiometry: 1.0
species: 232688

202350
type: SpeciesReference
stoichiometry: 1.0
species: 232520

202338
type: SpeciesReference
stoichiometry: 1.0
species: 232619