MODEL1006230056
type: SBMLModel
parameter: 317878
rule: 317454
parameter: 317821
rule: 317529
parameter: 317940
parameter: 317982
parameter: 317931
parameter: 317872
parameter: 317958
parameter: 317967
parameter: 317646
parameter: 317667
parameter: 317779
parameter: 317866
rule: 317469
parameter: 317809
rule: 317535
parameter: 317689
parameter: 317860
parameter: 317919
rule: 317520
rule: 317436
parameter: 317719
rule: 317601
parameter: 317746
rule: 317622
parameter: 317893
parameter: 317737
parameter: 317676
parameter: 317902
parameter: 317907
rule: 317517
rule: 317463
rule: 317484
parameter: 317794
rule: 317487
parameter: 317979
parameter: 317734
parameter: 317743
parameter: 317803
rule: 317457
rule: 317592
rule: 317523
parameter: 317913
parameter: 317839
units def: 456535
rule: 317496
parameter: 317949
rule: 317499
rule: 317445
parameter: 317976
rule: 317424
parameter: 317710
parameter: 317946
rule: 317589
parameter: 317634
parameter: 317854
parameter: 317785
rule: 317505
rule: 317577
rule: 317451
rule: 317607
parameter: 318000
parameter: 317830
parameter: 317934
rule: 317472
rule: 317475
parameter: 317755
parameter: 317851
rule: 317493
units def: 456598
rule: 317562
substance units: 178797
parameter: 317701
rule: 317433
compartment: 317405
parameter: 317988
name: Bagci2006_ApoptoticStimuli
parameter: 317698

317878
type: Parameter
constant: true
value: 5.0
name: k_15c

317821
type: Parameter
constant: false
value: NaN
name: J_5b

317940
type: Parameter
constant: true
value: 0.1
name: k_f6b

317982
type: Parameter
constant: true
value: 3.0E-4
name: P_Pro9

317931
type: Parameter
constant: true
value: 0.0035
name: k_05c

317872
type: Parameter
constant: true
value: 5.0
name: k_15

317958
type: Parameter
constant: true
value: 10.0
name: k13

317967
type: Parameter
constant: true
value: 0.006
name: u_Bax

317646
type: Parameter
constant: false
value: NaN
name: J_1

317667
type: Parameter
constant: false
value: NaN
name: J_Cytc_mito

317779
type: Parameter
constant: false
value: NaN
name: J_f3

317866
type: Parameter
constant: true
value: 5.0
name: k_14

317809
type: Parameter
constant: false
value: 0.0
name: Casp9IAP

317689
type: Parameter
constant: false
value: NaN
name: J_tBid

317860
type: Parameter
constant: true
value: 0.5
name: k_02

317919
type: Parameter
constant: true
value: 0.5
name: k_04

317719
type: Parameter
constant: false
value: NaN
name: J_Bcl_2

317746
type: Parameter
constant: false
value: 0.0
name: Casp3

317893
type: Parameter
constant: true
value: 10.0
name: k_18

317737
type: Parameter
constant: false
value: NaN
name: J_f8

317676
type: Parameter
constant: false
value: 0.0
name: tBid_mito

317902
type: Parameter
constant: true
value: 10.0
name: k11

317907
type: Parameter
constant: true
value: 50000.0
name: k_11b

317794
type: Parameter
constant: false
value: NaN
name: J_f6

317979
type: Parameter
constant: true
value: 3.0E-4
name: P_Pro3

317734
type: Parameter
constant: false
value: NaN
name: J_8

317743
type: Parameter
constant: false
value: NaN
name: J_Bid

317803
type: Parameter
constant: false
value: NaN
name: J_Pro3

317913
type: Parameter
constant: true
value: 10.0
name: k_13

317839
type: Parameter
constant: false
value: 0.0
name: Casp9

456535
type: SBMLUnitsDef
unit: 456560
unit: 456548
name: micromolar

456560
type: SBMLUnit
exponent: -1.0
scale: 0
multipler: 1.0
kind: LITRE

456548
type: SBMLUnit
exponent: 1.0
scale: -6
multipler: 1.0
kind: MOLE

317949
type: Parameter
constant: true
value: 10.0
name: k_19

317976
type: Parameter
constant: true
value: 3.0E-5
name: P_IAP

317710
type: Parameter
constant: false
value: NaN
name: P_Bax

317946
type: Parameter
constant: true
value: 0.5
name: k_08

317634
type: Parameter
constant: false
value: NaN
name: J_f0

317854
type: Parameter
constant: true
value: 0.5
name: k_01

317785
type: Parameter
constant: false
value: NaN
name: J_6b

318000
type: Parameter
constant: true
value: 4.0
name: p

317830
type: Parameter
constant: false
value: 0.0
name: ApopCasp9

317934
type: Parameter
constant: true
value: 0.5
name: k_06

317755
type: Parameter
constant: false
value: NaN
name: J_Casp3

317851
type: Parameter
constant: true
value: 0.1
name: k_f0

456598
type: SBMLUnitsDef
unit: 456637
unit: 456624
unit: 456611
name: second_order_rate_constant

456637
type: SBMLUnit
exponent: 1.0
scale: 0
multipler: 1.0
kind: LITRE

456624
type: SBMLUnit
exponent: -1.0
scale: -6
multipler: 1.0
kind: MOLE

456611
type: SBMLUnit
exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND

317701
type: Parameter
constant: false
value: 0.004
name: Bax

317405
type: Compartment
constant: true
units: litre
size: 1.0
spatial dimensions: 3.0

317988
type: Parameter
constant: true
value: 8.0E-5
name: P_oBcl_2

317698
type: Parameter
constant: false
value: NaN
name: J_tBidBax

317722
type: Parameter
constant: false
value: NaN
name: P_Bcl_2

317682
type: Parameter
constant: false
value: NaN
name: J_tBid_mito

317664
type: Parameter
constant: false
value: NaN
name: J_14

317797
type: Parameter
constant: false
value: 0.004
name: Pro3

317679
type: Parameter
constant: false
value: NaN
name: J_12a

317627
type: Parameter
constant: false
value: 0.0
name: Casp8

317686
type: Parameter
constant: false
value: NaN
name: J_11

317964
type: Parameter
constant: true
value: 0.006
name: u

317985
type: Parameter
constant: true
value: 3.0E-5
name: P_Bid

317863
type: Parameter
constant: true
value: 0.5
name: k_03

317683
type: Parameter
constant: false
value: 0.0
name: tBid

317692
type: Parameter
constant: false
value: 0.0
name: tBidBax

317631
type: Parameter
constant: false
value: NaN
name: J_0

317899
type: Parameter
constant: true
value: 0.5
name: k_09

317764
type: Parameter
constant: false
value: 0.0
name: ApopPro9

317713
type: Parameter
constant: false
value: 0.004
name: Bcl_2

317812
type: Parameter
constant: false
value: 0.0
name: ApopCasp9IAP

317952
type: Parameter
constant: true
value: 0.1
name: k_f9

317991
type: Parameter
constant: true
value: 3.0E-5
name: P_oBax

317752
type: Parameter
constant: false
value: NaN
name: J_7

317637
type: Parameter
constant: false
value: NaN
name: J_Casp8

317903
type: Parameter
constant: true
value: 10.0
name: k12b

317904
type: Parameter
constant: true
value: 10.0
name: k14

ORG:
  orgname: The University of Auckland
n:
  given: Wendy
  family: Kang

317761
type: Parameter
constant: false
value: 0.004
name: Pro9

317800
type: Parameter
constant: false
value: NaN
name: J_6

317857
type: Parameter
constant: true
value: 0.5
name: k_01b

317997
type: Parameter
constant: true
value: 0.0066
name: p53

317833
type: Parameter
constant: false
value: NaN
name: J_4

ORG:
  orgname: The University of Auckland
n:
  given: Wendy
  family: Kang

317943
type: Parameter
constant: true
value: 0.0035
name: k_07

317758
type: Parameter
constant: false
value: 0.0
name: Apop

317643
type: Parameter
constant: false
value: NaN
name: J_Apaf_1

317670
type: Parameter
constant: false
value: 0.0
name: Bax_2

317652
type: Parameter
constant: false
value: NaN
name: J_1b

317905
type: Parameter
constant: true
value: 0.5
name: k_00

317640
type: Parameter
constant: false
value: 0.004
name: Apaf_1

317782
type: Parameter
constant: false
value: 0.0
name: ApopCasp9_2Pro3

317649
type: Parameter
constant: false
value: 0.0
name: CytcApaf_1

317773
type: Parameter
constant: false
value: NaN
name: J_Pro9

317869
type: Parameter
constant: true
value: 5.0
name: k_14b

317848
type: Parameter
constant: true
value: 10.0
name: k_10

317749
type: Parameter
constant: false
value: 0.0
name: Casp3IAP

456650
type: SBMLUnitsDef
unit: 456687
unit: 456675
unit: 456663
name: flux

456687
type: SBMLUnit
exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND

456675
type: SBMLUnit
exponent: -1.0
scale: 0
multipler: 1.0
kind: LITRE

456663
type: SBMLUnit
exponent: 1.0
scale: -6
multipler: 1.0
kind: MOLE

317818
type: Parameter
constant: false
value: NaN
name: J_5

317845
type: Parameter
constant: false
value: 0.0
name: ApopCasp9_2

317906
type: Parameter
constant: true
value: 5.0
name: k_11

317770
type: Parameter
constant: false
value: NaN
name: J_3

317955
type: Parameter
constant: true
value: 10.0
name: k12a

317896
type: Parameter
constant: true
value: 0.1
name: k_f8

317875
type: Parameter
constant: true
value: 5.0
name: k_15b

317740
type: Parameter
constant: false
value: 0.004
name: Bid

317695
type: Parameter
constant: false
value: NaN
name: J_12b

317716
type: Parameter
constant: false
value: NaN
name: J_9

317815
type: Parameter
constant: false
value: 0.0
name: ApopCasp9_2IAP

317806
type: Parameter
constant: false
value: 0.004
name: IAP

456699
type: SBMLUnitsDef
unit: 456735
unit: 456723
unit: 456711
name: rate

456735
type: SBMLUnit
exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND

456723
type: SBMLUnit
exponent: 3.0
scale: 0
multipler: 1.0
kind: LITRE

456711
type: SBMLUnit
exponent: -3.0
scale: -6
multipler: 1.0
kind: MOLE

317925
type: Parameter
constant: true
value: 0.0035
name: k_05

317842
type: Parameter
constant: false
value: NaN
name: J_Casp9

W3 CDTF: Fri Jun 25 14:18:40 BST 2010

317994
type: Parameter
constant: true
value: 3.0E-4
name: P_Cytc_mito

317884
type: Parameter
constant: true
value: 0.001
name: k_f6

317961
type: Parameter
constant: true
value: 0.004
name: p53_thresh

317661
type: Parameter
constant: false
value: 0.004
name: Cytc_mito

317922
type: Parameter
constant: true
value: 0.5
name: k_04b

317881
type: Parameter
constant: true
value: 10.0
name: k_16

317890
type: Parameter
constant: true
value: 5.0
name: k_17

317628
type: Parameter
constant: false
value: 0.0
name: Casp8Bid

317916
type: Parameter
constant: true
value: 0.1
name: k_f3

W3 CDTF: Fri Jun 25 14:18:40 BST 2010

456572
type: SBMLUnitsDef
unit: 456585
name: first_order_rate_constant

456585
type: SBMLUnit
exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND

317970
type: Parameter
constant: true
value: 0.006
name: u_Bcl_2

317910
type: Parameter
constant: true
value: 10.0
name: k_12

317791
type: Parameter
constant: false
value: 0.0
name: Casp9Pro3

317731
type: Parameter
constant: false
value: 0.0
name: Casp3Bid

317887
type: Parameter
constant: true
value: 0.5
name: k_06b

317673
type: Parameter
constant: false
value: NaN
name: J_Bax_2

317655
type: Parameter
constant: false
value: 0.0
name: Cytc

317767
type: Parameter
constant: false
value: NaN
name: J_2

317788
type: Parameter
constant: false
value: NaN
name: J_f6b

317827
type: Parameter
constant: false
value: NaN
name: J_IAP

317728
type: Parameter
constant: false
value: NaN
name: J_f9

317836
type: Parameter
constant: false
value: NaN
name: J_4b

317937
type: Parameter
constant: true
value: 10.0
name: k_16b

317973
type: Parameter
constant: true
value: 3.0E-4
name: P_Apaf_1

317707
type: Parameter
constant: false
value: NaN
name: J_Bax

317776
type: Parameter
constant: false
value: 0.0
name: ApopPro9_2

317824
type: Parameter
constant: false
value: NaN
name: J_5c

317928
type: Parameter
constant: true
value: 0.0035
name: k_05b

317658
type: Parameter
constant: false
value: NaN
name: J_Cytc

317704
type: Parameter
constant: false
value: NaN
name: J_13

317725
type: Parameter
constant: false
value: 0.0
name: Casp3Bcl_2

ORG:
  orgname: The University of Auckland
n:
  given: Wendy
  family: Kang

W3 CDTF: Fri Jun 25 14:18:40 BST 2010

W3 CDTF: Fri Jun 25 14:18:40 BST 2010