MODEL1006230026
type: SBMLModel
parameter: 693462
parameter: 693336
parameter: 693204
parameter: 693413
parameter: 693354
parameter: 693441
rule: 693029
rule: 693152
parameter: 693315
parameter: 693222
rule: 693163
rule: 693140
rule: 693099
parameter: 693192
parameter: 693421
rule: 693068
parameter: 693427
rule: 693092
parameter: 693208
rule: 693122
rule: 693037
curated: false
rule: 693065
parameter: 693406
rule: 693160
parameter: 693386
parameter: 693340
rule: 693138
parameter: 693384
rule: 693060
parameter: 693214
parameter: 693279
parameter: 693326
rule: 693055
parameter: 693344
parameter: 693305
parameter: 693380
rule: 693050
parameter: 693188
parameter: 693227
rule: 693045
units def: 328915
rule: 693132
parameter: 693206
rule: 693082
parameter: 693444
is described by: http://identifiers.org/pubmed/18509469
rule: 693075
rule: 693063
parameter: 693423
parameter: 693442
volume units: 290956
parameter: 693402
parameter: 693181
rule: 693145
parameter: 693382
parameter: 693179
rule: 693097
parameter: 693230
rule: 693085
parameter: 693210
parameter: 693349
rule: 693115
rule: 693090
parameter: 693387
parameter: 693217
parameter: 693328
rule: 693108
parameter: 693366
parameter: 693434
parameter: 693308
rule: 693148
parameter: 693296
parameter: 693173
rule: 693124
rule: 693153
parameter: 693199
rule: 693117
parameter: 693447

693462
type: Parameter
constant: true
value: 1.0
name: k_1

693336
type: Parameter
constant: false
value: NaN
name: r_17NO

693204
type: Parameter
constant: false
value: NaN
name: P_Bax

693413
type: Parameter
constant: true
value: 3.0E-4
name: P_Apaf_1

693354
type: Parameter
constant: true
value: 0.5
name: k_01b

693441
type: Parameter
constant: true
value: 1100.0
name: k_12bNOp

693315
type: Parameter
constant: false
value: NaN
name: r_5NO

693222
type: Parameter
constant: false
value: NaN
name: J_7

693192
type: Parameter
constant: false
value: NaN
name: J_tBid_mito

693421
type: Parameter
constant: true
value: 3.0E-5
name: P_oBax

693427
type: Parameter
constant: true
value: 6700.0
name: k_4NO

693208
type: Parameter
constant: false
value: NaN
name: J_Bcl_2

693406
type: Parameter
constant: true
value: 10.0
name: k13

693386
type: Parameter
constant: true
value: 0.1
name: k_f3

693340
type: Parameter
constant: false
value: NaN
name: r_13NO

693384
type: Parameter
constant: true
value: 10.0
name: k_13

693214
type: Parameter
constant: false
value: NaN
name: J_8

693279
type: Parameter
constant: false
value: 0.0
name: ApopCasp9_2IAP

693326
type: Parameter
constant: false
value: NaN
name: r_7NO

693344
type: Parameter
constant: false
value: NaN
name: r_21NO

693305
type: Parameter
constant: false
value: NaN
name: r_12bNOm

693380
type: Parameter
constant: true
value: 5.0
name: k_11

693188
type: Parameter
constant: false
value: NaN
name: J_Bax_2

693227
type: Parameter
constant: false
value: 0.0
name: ApopPro9

328915
type: SBMLUnitsDef
unit: 328951
unit: 328939
unit: 328927
name: rate

328951
type: SBMLUnit
exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND

328939
type: SBMLUnit
exponent: 3.0
scale: 0
multipler: 1.0
kind: LITRE

328927
type: SBMLUnit
exponent: -3.0
scale: -6
multipler: 1.0
kind: MOLE

693206
type: Parameter
constant: false
value: NaN
name: J_9

693444
type: Parameter
constant: true
value: 50.0
name: k_m

693423
type: Parameter
constant: true
value: 0.0066
name: p53

693442
type: Parameter
constant: true
value: 1600.0
name: k_13NO

693402
type: Parameter
constant: true
value: 10.0
name: k_19

693181
type: Parameter
constant: false
value: NaN
name: PTPC_act

693382
type: Parameter
constant: true
value: 50000.0
name: k_11b

693179
type: Parameter
constant: false
value: 0.0
name: Cytc

693230
type: Parameter
constant: false
value: NaN
name: J_3

693210
type: Parameter
constant: false
value: 0.0
name: Casp3Bcl_2

693349
type: Parameter
constant: true
value: 10.0
name: k_10

693387
type: Parameter
constant: true
value: 0.5
name: k_04

693217
type: Parameter
constant: false
value: 0.004
name: Bid

693328
type: Parameter
constant: false
value: NaN
name: r_9NO

693366
type: Parameter
constant: true
value: 10.0
name: k_16

693434
type: Parameter
constant: true
value: 0.025
name: k_9NO

693308
type: Parameter
constant: false
value: NaN
name: r_15NO

693296
type: Parameter
constant: true
value: 35.0
name: O_2

693173
type: Parameter
constant: false
value: 0.004
name: Apaf_1

693199
type: Parameter
constant: false
value: NaN
name: J_tBidBax

693447
type: Parameter
constant: true
value: 100.0
name: k_15NO

693171
type: Parameter
constant: false
value: NaN
name: J_Casp8

693189
type: Parameter
constant: false
value: 0.0
name: tBid_mito

693426
type: Parameter
constant: true
value: 0.1
name: k_2NO

693177
type: Parameter
constant: false
value: 0.0
name: CytcApaf_1

ORG:
  orgname: The University of Auckland
n:
  given: Wendy
  family: Kang

693393
type: Parameter
constant: true
value: 0.0035
name: k_05c

693383
type: Parameter
constant: true
value: 10.0
name: k_12

693213
type: Parameter
constant: false
value: 0.0
name: Casp3Bid

693278
type: Parameter
constant: false
value: 0.0
name: ApopCasp9IAP

693343
type: Parameter
constant: false
value: 0.0
name: FeLnNO

693430
type: Parameter
constant: true
value: 0.00135
name: k_6NO

693191
type: Parameter
constant: false
value: NaN
name: J_12a

693211
type: Parameter
constant: false
value: NaN
name: J_f9

693304
type: Parameter
constant: false
value: NaN
name: r_12bNOp

693294
type: Parameter
constant: false
value: 0.0
name: ApopCasp9_2

693237
type: Parameter
constant: false
value: NaN
name: J_f6b

693410
type: Parameter
constant: true
value: 0.006
name: u_Bax

693312
type: Parameter
constant: true
value: 10.0
name: SOD

W3 CDTF: Fri Jun 25 13:34:56 BST 2010

693292
type: Parameter
constant: false
value: NaN
name: J_Casp9

693357
type: Parameter
constant: true
value: 0.5
name: k_03

693226
type: Parameter
constant: false
value: 0.004
name: Pro9

693463
type: Parameter
constant: true
value: 0.0
name: PTPC_0

693443
type: Parameter
constant: true
value: 320.0
name: v_m

693174
type: Parameter
constant: false
value: NaN
name: J_Apaf_1

693429
type: Parameter
constant: true
value: 2400.0
name: k_5NO

693178
type: Parameter
constant: false
value: NaN
name: J_1b

693348
type: Parameter
constant: false
value: NaN
name: r_19NO

693375
type: Parameter
constant: true
value: 10.0
name: k11

693290
type: Parameter
constant: false
value: NaN
name: J_4b

693327
type: Parameter
constant: false
value: NaN
name: r_8NO

693243
type: Parameter
constant: false
value: NaN
name: J_Pro3

693299
type: Parameter
constant: false
value: 0.1
name: CcOX

693233
type: Parameter
constant: false
value: NaN
name: J_f3

693433
type: Parameter
constant: true
value: 0.058
name: k_8NO

693307
type: Parameter
constant: false
value: NaN
name: r_14NO

693335
type: Parameter
constant: false
value: NaN
name: r_m

693203
type: Parameter
constant: false
value: NaN
name: J_Bax

693460
type: Parameter
constant: true
value: 66.0
name: k_22NO

693379
type: Parameter
constant: true
value: 0.5
name: k_00

693295
type: Parameter
constant: false
value: 0.0
name: NO

693172
type: Parameter
constant: false
value: NaN
name: r_20NO

693419
type: Parameter
constant: true
value: 8.0E-5
name: P_oBcl_2

693198
type: Parameter
constant: false
value: NaN
name: J_12b

693446
type: Parameter
constant: true
value: 2.0E-4
name: k_14NO

693464
type: Parameter
constant: true
value: 4.0
name: p

693425
type: Parameter
constant: true
value: 1.0
name: k_1NO

693176
type: Parameter
constant: false
value: NaN
name: J_1

W3 CDTF: Fri Jun 25 13:34:56 BST 2010

693392
type: Parameter
constant: true
value: 0.0035
name: k_05b

693297
type: Parameter
constant: false
value: 0.0
name: NO_2

693371
type: Parameter
constant: true
value: 10.0
name: k_18

693450
type: Parameter
constant: true
value: 66.0
name: k_17NO

693352
type: Parameter
constant: true
value: 0.5
name: k_01

693238
type: Parameter
constant: false
value: 0.0
name: Casp9Pro3

693220
type: Parameter
constant: false
value: 0.0
name: Casp3IAP

693218
type: Parameter
constant: false
value: NaN
name: J_Bid

693456
type: Parameter
constant: true
value: 10.0
name: k_19NO

693303
type: Parameter
constant: false
value: NaN
name: r_12aNO

693331
type: Parameter
constant: false
value: 10000.0
name: GSH

693396
type: Parameter
constant: true
value: 10.0
name: k_16b

693311
type: Parameter
constant: false
value: 35.0
name: O_2m

693454
type: Parameter
constant: true
value: 10000.0
name: GSH_0

693376
type: Parameter
constant: true
value: 10.0
name: k12b

693291
type: Parameter
constant: false
value: 0.0
name: Casp9

693415
type: Parameter
constant: true
value: 3.0E-4
name: P_Pro3

693317
type: Parameter
constant: false
value: NaN
name: r_10NO

693224
type: Parameter
constant: false
value: 0.0
name: Apop

693166
type: Parameter
constant: false
value: 0.0
name: Casp8

693194
type: Parameter
constant: false
value: NaN
name: J_11

693448
type: Parameter
constant: true
value: 1.21
name: k_16NO

693401
type: Parameter
constant: true
value: 0.5
name: k_08

693187
type: Parameter
constant: false
value: 0.0
name: Bax_2

328866
type: SBMLUnitsDef
unit: 328902
unit: 328890
unit: 328878
name: flux

328902
type: SBMLUnit
exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND

328890
type: SBMLUnit
exponent: -1.0
scale: 0
multipler: 1.0
kind: LITRE

328878
type: SBMLUnit
exponent: 1.0
scale: -6
multipler: 1.0
kind: MOLE

693283
type: Parameter
constant: false
value: NaN
name: J_5b

693301
type: Parameter
constant: false
value: NaN
name: r_4NO

693347
type: Parameter
constant: false
value: 0.0
name: PTPC

693215
type: Parameter
constant: false
value: NaN
name: J_f8

693452
type: Parameter
constant: true
value: 0.05
name: FeLn_0

693374
type: Parameter
constant: true
value: 0.5
name: k_09

693242
type: Parameter
constant: false
value: NaN
name: J_6

693287
type: Parameter
constant: false
value: 0.0
name: ApopCasp9

693459
type: Parameter
constant: true
value: 66.0
name: k_21NO

328817
type: SBMLUnitsDef
unit: 328854
unit: 328841
unit: 328829
name: second_order_rate_constant

328854
type: SBMLUnit
exponent: 1.0
scale: 0
multipler: 1.0
kind: LITRE

328841
type: SBMLUnit
exponent: -1.0
scale: -6
multipler: 1.0
kind: MOLE

328829
type: SBMLUnit
exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND

693372
type: Parameter
constant: true
value: 0.1
name: k_f8

693334
type: Parameter
constant: false
value: NaN
name: r_11NO

693399
type: Parameter
constant: true
value: 0.0035
name: k_07

693240
type: Parameter
constant: false
value: NaN
name: J_f6

693438
type: Parameter
constant: true
value: 6.0E-6
name: k_12aNO

693411
type: Parameter
constant: true
value: 0.006
name: u_Bcl_2

693314
type: Parameter
constant: false
value: NaN
name: r_2NO

693219
type: Parameter
constant: false
value: 0.0
name: Casp3

693378
type: Parameter
constant: true
value: 10.0
name: k14

693332
type: Parameter
constant: false
value: NaN
name: GSSG

693246
type: Parameter
constant: false
value: 0.0
name: Casp9IAP

693418
type: Parameter
constant: true
value: 3.0E-5
name: P_Bid

693200
type: Parameter
constant: false
value: 0.004
name: Bax

693169
type: Parameter
constant: false
value: NaN
name: J_f0

693197
type: Parameter
constant: false
value: 0.0
name: tBidBax

693318
type: Parameter
constant: false
value: 0.0
name: ONOO_m

693167
type: Parameter
constant: false
value: 0.0
name: Casp8Bid

693183
type: Parameter
constant: false
value: 0.004
name: Cytc_mito

693364
type: Parameter
constant: true
value: 5.0
name: k_15c

693232
type: Parameter
constant: false
value: 0.0
name: ApopPro9_2

693324
type: Parameter
constant: false
value: NaN
name: r_6NO

693389
type: Parameter
constant: true
value: 0.5
name: k_04b

693370
type: Parameter
constant: true
value: 5.0
name: k_17

693351
type: Parameter
constant: true
value: 0.1
name: k_f0

693022
type: Compartment
constant: true
units: litre
size: 1.0
spatial dimensions: 3.0

693368
type: Parameter
constant: true
value: 0.5
name: k_06b

328792
type: SBMLUnitsDef
unit: 328805
name: first_order_rate_constant

328805
type: SBMLUnit
exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND

693284
type: Parameter
constant: false
value: NaN
name: J_5c

693236
type: Parameter
constant: false
value: NaN
name: J_6b

ORG:
  orgname: The University of Auckland
n:
  given: Wendy
  family: Kang

693455
type: Parameter
constant: true
value: 1.0
name: k_18NO

693330
type: Parameter
constant: false
value: NaN
name: r_18NO

693395
type: Parameter
constant: true
value: 0.5
name: k_06

693435
type: Parameter
constant: true
value: 6.0E-4
name: k_10NO

693337
type: Parameter
constant: false
value: 0.0
name: GSNO

693205
type: Parameter
constant: false
value: 0.004
name: Bcl_2

693414
type: Parameter
constant: true
value: 3.0E-5
name: P_IAP

693355
type: Parameter
constant: true
value: 0.5
name: k_02

693223
type: Parameter
constant: false
value: NaN
name: J_Casp3

693288
type: Parameter
constant: false
value: NaN
name: J_4

693193
type: Parameter
constant: false
value: 0.0
name: tBid

693422
type: Parameter
constant: true
value: 3.0E-4
name: P_Cytc_mito

693439
type: Parameter
constant: true
value: 81000.0
name: k_12bNOm

693209
type: Parameter
constant: false
value: NaN
name: P_Bcl_2

693407
type: Parameter
constant: true
value: 0.004
name: p53_thresh

693186
type: Parameter
constant: false
value: NaN
name: J_Cytc_mito

693360
type: Parameter
constant: true
value: 5.0
name: k_14b

693341
type: Parameter
constant: false
value: 0.05
name: FeLn

W3 CDTF: Fri Jun 25 13:34:56 BST 2010

693320
type: Parameter
constant: true
value: 5.8
name: GPX

ORG:
  orgname: The University of Auckland
n:
  given: Wendy
  family: Kang

693300
type: Parameter
constant: false
value: NaN
name: r_1NO

693280
type: Parameter
constant: false
value: NaN
name: J_5

693345
type: Parameter
constant: false
value: NaN
name: r_22NO

693451
type: Parameter
constant: true
value: 2.0E-4
name: k_17bNO

693241
type: Parameter
constant: false
value: 0.004
name: Pro3

693286
type: Parameter
constant: false
value: NaN
name: J_IAP

693458
type: Parameter
constant: true
value: 66.0
name: k_20NO

693431
type: Parameter
constant: true
value: 2.0
name: k_7NO

328963
type: SBMLUnitsDef
unit: 329000
unit: 328988
unit: 328975
name: rate2

329000
type: SBMLUnit
exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND

328988
type: SBMLUnit
exponent: 2.0
scale: 0
multipler: 1.0
kind: LITRE

328975
type: SBMLUnit
exponent: -2.0
scale: -6
multipler: 1.0
kind: MOLE

693398
type: Parameter
constant: true
value: 0.1
name: k_f6b

693228
type: Parameter
constant: false
value: NaN
name: J_2

693201
type: Parameter
constant: false
value: NaN
name: J_13

693437
type: Parameter
constant: true
value: 66.0
name: k_11NO

693339
type: Parameter
constant: false
value: 0.0
name: N2O3

693358
type: Parameter
constant: true
value: 5.0
name: k_14

693245
type: Parameter
constant: false
value: 0.004
name: IAP

693417
type: Parameter
constant: true
value: 3.0E-4
name: P_Pro9

693168
type: Parameter
constant: false
value: NaN
name: J_0

693196
type: Parameter
constant: false
value: NaN
name: J_tBid

693405
type: Parameter
constant: true
value: 10.0
name: k12a

693184
type: Parameter
constant: false
value: NaN
name: J_14

693403
type: Parameter
constant: true
value: 0.1
name: k_f9

328756
type: SBMLUnitsDef
unit: 328780
unit: 328768
name: micromolar

328780
type: SBMLUnit
exponent: -1.0
scale: 0
multipler: 1.0
kind: LITRE

328768
type: SBMLUnit
exponent: 1.0
scale: -6
multipler: 1.0
kind: MOLE

693182
type: Parameter
constant: false
value: NaN
name: J_Cytc

693409
type: Parameter
constant: true
value: 0.006
name: u

W3 CDTF: Fri Jun 25 13:34:56 BST 2010

693363
type: Parameter
constant: true
value: 5.0
name: k_15b

693231
type: Parameter
constant: false
value: NaN
name: J_Pro9

693390
type: Parameter
constant: true
value: 0.0035
name: k_05

693361
type: Parameter
constant: true
value: 5.0
name: k_15

693323
type: Parameter
constant: true
value: 400.0
name: Cyt_c

693367
type: Parameter
constant: true
value: 0.001
name: k_f6

693321
type: Parameter
constant: true
value: 1000.0
name: CO_2

693235
type: Parameter
constant: false
value: 0.0
name: ApopCasp9_2Pro3

693309
type: Parameter
constant: false
value: NaN
name: r_16NO