MODEL1001200000
type: SBMLModel
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species: metaid M 2
reaction: metaid R 1827
reaction: metaid R 36
species: metaid E 390
species: metaid E 4
species: metaid M 507
species: metaid E 769
species: metaid E 483
reaction: metaid R 1050
reaction: metaid R 493
species: metaid E 48
reaction: metaid R 357
parameter: metaid M 1022 0
reaction: metaid R 522
reaction: metaid R 888
reaction: metaid R 667
species: metaid E 650
species: metaid E 34
species: metaid M 411
reaction: metaid R 807
species: metaid E 509
species: metaid M 745
species: metaid M 95
species: metaid E 280
parameter: metaid M 148 0
species: metaid M 471
reaction: metaid R 10
species: metaid M 139
species: metaid E 553
species: metaid E 569
reaction: metaid R 439
species: metaid M 731
species: metaid Cx 16
species: metaid E 464
species: metaid M 487
reaction: metaid R 976
species: metaid M 81
species: metaid M 652
species: metaid M 66
species: metaid M 563
species: metaid E 29
parameter: metaid M 505 0
parameter: metaid M 742 0
reaction: metaid R 641
reaction: metaid R 395
species: metaid E 199
parameter: metaid M 186 0
species: metaid E 275
species: metaid M 303
parameter: metaid M 299 0
species: metaid E 548
species: metaid M 361
species: metaid M 549
species: metaid Cx 60
reaction: metaid R 1177
species: metaid E 459
reaction: metaid R 1092
parameter: metaid M 265 0
species: metaid M 76
species: metaid E 261
species: metaid E 624
species: metaid M 647
species: metaid M 542
species: metaid E 114
species: metaid M 558
reaction: metaid R 8
species: metaid E 610
reaction: metaid R 950
species: metaid E 178
species: metaid E 83
reaction: metaid R 814
reaction: metaid R 1790
species: metaid Cx 54
species: metaid M 723
species: metaid E 363
species: metaid M 165
species: metaid M 787
parameter: metaid M 550 0

metaid M 494 0
type: Parameter
is part of: http://identifiers.org/taxonomy/9606
is part of: http://identifiers.org/taxonomy/1
is described by: BIOMD0000000070
is described by: BIOMD0000000013
constant: true
units: 781101
value: 0.01041

781101
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781125
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kind: LITRE

781113
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scale: -3
multipler: 1.0
kind: MOLE

metaid M 2
type: Species
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initial concentration: NaN
initial amount: NaN

http://identifiers.org/biomodels.db/MODEL1001200000#_1217b6f5_0b2e_4e8e_b3d0_f9c20aac5b5f
type: Compartment
is: GO:0005622
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: intracellular

metaid R 1827
type: Reaction
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product: 938923
reactant: 938911
reactant: 938899
is: SBO:0000176
fast: false
reversible: true
name: YEL039C, YEL071W

938923
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species: metaid Cx 66

metaid Cx 66
type: Species
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initial concentration: NaN
initial amount: NaN

938911
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species: metaid E 302

metaid E 302
type: Species
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boundary condition: true
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initial concentration: NaN
initial amount: NaN

938899
type: SpeciesReference
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species: metaid E 236

metaid E 236
type: Species
constant: true
boundary condition: true
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initial concentration: NaN
initial amount: NaN

metaid R 36
type: Reaction
product: 792509
name: 3-Hexaprenyl-4-hydroxy-5-methoxybenzoate decarboxylase, mitochondrial
fast: false
is described by: http://identifiers.org/pubmed/15792955
is: SBO:0000176
reversible: true
kinetic law: 792533
reactant: 792497
product: 792521

792509
type: SpeciesReference
stoichiometry: 1.0
species: metaid M 772

metaid M 772
type: Species
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initial concentration: NaN
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792581
type: LocalParameter
units: dimensionless
value: -1.0

792569
type: LocalParameter
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value: -1.0

792557
type: LocalParameter
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value: 1.0

792545
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value: 0.0

781137
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unit: 781149
name: mmol/s

781161
type: SBMLUnit
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scale: 0
multipler: 1.0
kind: SECOND

781149
type: SBMLUnit
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scale: -3
multipler: 1.0
kind: MOLE

792497
type: SpeciesReference
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species: metaid M 787

metaid M 787
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

792521
type: SpeciesReference
stoichiometry: 1.0
species: metaid M 203

metaid M 203
type: Species
constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN

metaid E 390
type: Species
constant: true
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

metaid E 4
type: Species
constant: true
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

http://identifiers.org/biomodels.db/MODEL1001200000#_92c9529f_1e07_4688_9948_4e75cf03b2e1
type: Compartment
is: GO:0005576
is: SBO:0000290
constant: true
size: 1.0
spatial dimensions: 3.0
name: extracellular

metaid M 507
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

metaid E 769
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN

metaid E 483
type: Species
constant: true
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

metaid R 1050
type: Reaction
product: 903297
reactant: 903273
is: http://identifiers.org/ec-code/2.7.1.33
fast: false
reactant: 903260
product: 903309
modifier: 903321
reversible: true
product: 903285
name: pantothenate kinase
kinetic law: 903333
is: SBO:0000176

903297
type: SpeciesReference
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species: metaid M 135

metaid M 135
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
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903273
type: SpeciesReference
stoichiometry: 1.0
species: metaid M 457

metaid M 457
type: Species
constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN

903260
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species: metaid M 172

metaid M 172
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

903309
type: SpeciesReference
stoichiometry: 1.0
species: metaid M 329

metaid M 329
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

metaid E 695
type: Species
constant: true
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

903285
type: SpeciesReference
stoichiometry: 1.0
species: metaid M 84

metaid M 84
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

903405
type: LocalParameter
units: dimensionless
value: -1.0

903393
type: LocalParameter
units: dimensionless
value: -1.0

903381
type: LocalParameter
units: dimensionless
value: -1.0

903369
type: LocalParameter
units: dimensionless
value: 1.0

903357
type: LocalParameter
units: dimensionless
value: 1.0

903345
type: LocalParameter
units: 781137
value: 0.0

metaid R 493
type: Reaction
reversible: true
product: 838998
kinetic law: 839022
is: http://identifiers.org/ec-code/2.3.1.86
product: 838986
fast: false
reactant: 838962
product: 838974
name: fatty-acyl-ACP hydrolase
reactant: 838950
modifier: 839010
is: SBO:0000176

838998
type: SpeciesReference
stoichiometry: 1.0
species: metaid M 425

metaid M 425
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

839095
type: LocalParameter
units: dimensionless
value: -1.0

839083
type: LocalParameter
units: dimensionless
value: -1.0

839070
type: LocalParameter
units: dimensionless
value: -1.0

839058
type: LocalParameter
units: dimensionless
value: 1.0

839046
type: LocalParameter
units: dimensionless
value: 1.0

839034
type: LocalParameter
units: 781137
value: 0.0

838986
type: SpeciesReference
stoichiometry: 1.0
species: metaid M 329

838962
type: SpeciesReference
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species: metaid M 426

metaid M 426
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

838974
type: SpeciesReference
stoichiometry: 1.0
species: metaid M 100

metaid M 100
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

838950
type: SpeciesReference
stoichiometry: 1.0
species: metaid M 330

metaid M 330
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

metaid Cx 4
type: Species
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN

metaid E 48
type: Species
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boundary condition: true
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initial concentration: NaN
initial amount: NaN

metaid R 357
type: Reaction
modifier: 826040
name: Ubiquinol:ferricytochrome-c oxidoreductase
kinetic law: 826052
product: 826004
is: SBO:0000176
is: http://identifiers.org/ec-code/1.10.2.2
product: 826016
reversible: true
reactant: 825967
reactant: 825979
product: 825992
modifier: 826028
fast: false

metaid Cx 65
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN

826124
type: LocalParameter
units: dimensionless
value: -2.0

826112
type: LocalParameter
units: dimensionless
value: -1.0

826100
type: LocalParameter
units: dimensionless
value: -2.0

826088
type: LocalParameter
units: dimensionless
value: 2.0

826076
type: LocalParameter
units: dimensionless
value: 1.0

826064
type: LocalParameter
units: 781137
value: 0.0

826004
type: SpeciesReference
stoichiometry: 1.0
species: metaid M 956

metaid M 956
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

826016
type: SpeciesReference
stoichiometry: 2.0
species: metaid M 1167

metaid M 1167
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

825967
type: SpeciesReference
stoichiometry: 1.0
species: metaid M 957

metaid M 957
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

825979
type: SpeciesReference
stoichiometry: 2.0
species: metaid M 1166

metaid M 1166
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

825992
type: SpeciesReference
stoichiometry: 2.0
species: metaid M 329

metaid Cx 16
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN

metaid M 1022 0
type: Parameter
constant: true
units: 781101
value: 0.176

metaid R 522
type: Reaction
is: http://identifiers.org/ec-code/1.3.3.6
modifier: 843306
reactant: 843210
modifier: 843319
reactant: 843198
is described by: http://identifiers.org/pubmed/9837886
reactant: 843234
reactant: 843222
product: 843294
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product: 843282
product: 843258
kinetic law: 843331
name: Fatty acid oxidation
reactant: 843246
product: 843270
is: SBO:0000176
fast: false

metaid Cx 22
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
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843210
type: SpeciesReference
stoichiometry: 8.0
species: metaid M 330

metaid Cx 73
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN

843198
type: SpeciesReference
stoichiometry: 8.0
species: metaid M 204

metaid M 204
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

843234
type: SpeciesReference
stoichiometry: 7.0
species: metaid M 419

metaid M 419
type: Species
constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN

843222
type: SpeciesReference
stoichiometry: 8.0
species: metaid M 411

metaid M 411
type: Species
constant: false
boundary condition: false
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initial concentration: NaN
initial amount: NaN

843294
type: SpeciesReference
stoichiometry: 8.0
species: metaid M 412

metaid M 412
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
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843282
type: SpeciesReference
stoichiometry: 7.0
species: metaid M 331

metaid M 331
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

843258
type: SpeciesReference
stoichiometry: 9.0
species: metaid M 122

metaid M 122
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

843440
type: LocalParameter
units: dimensionless
value: -7.0

843452
type: LocalParameter
units: dimensionless
value: -8.0

843343
type: LocalParameter
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value: 0.0

843380
type: LocalParameter
units: dimensionless
value: 8.0

843404
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value: 1.0

843355
type: LocalParameter
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843416
type: LocalParameter
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843392
type: LocalParameter
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843428
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value: -8.0

843367
type: LocalParameter
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843246
type: SpeciesReference
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species: metaid M 430

metaid M 430
type: Species
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initial concentration: NaN
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843270
type: SpeciesReference
stoichiometry: 8.0
species: metaid M 329

metaid R 888
type: Reaction
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product: 886782
reactant: 886770
is: SBO:0000176
reactant: 886758
product: 886794
reversible: true
modifier: 886806
kinetic law: 886818
is described by: http://identifiers.org/pubmed/14506228
fast: false

886782
type: SpeciesReference
stoichiometry: 1.0
species: metaid M 92

metaid M 92
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN

886770
type: SpeciesReference
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species: metaid M 454

metaid M 454
type: Species
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boundary condition: false
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initial concentration: NaN
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886758
type: SpeciesReference
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species: metaid M 94

metaid M 94
type: Species
constant: false
boundary condition: false
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initial concentration: NaN
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886794
type: SpeciesReference
stoichiometry: 1.0
species: metaid M 133

metaid M 133
type: Species
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boundary condition: false
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initial concentration: NaN
initial amount: NaN

metaid E 596
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boundary condition: true
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initial concentration: NaN
initial amount: NaN

886879
type: LocalParameter
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886867
type: LocalParameter
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value: -1.0

886855
type: LocalParameter
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value: 1.0

886843
type: LocalParameter
units: dimensionless
value: 1.0

886831
type: LocalParameter
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value: -0.01398

metaid R 667
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product: 863595
reactant: 863583
is: SBO:0000185
fast: false
reversible: true
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863631
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863619
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value: 0.0

863595
type: SpeciesReference
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species: metaid M 658

metaid M 658
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boundary condition: true
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initial concentration: 0.0
initial amount: NaN

863583
type: SpeciesReference
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species: metaid M 314

metaid M 314
type: Species
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initial concentration: NaN
initial amount: NaN

metaid E 650
type: Species
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boundary condition: true
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initial concentration: NaN
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metaid E 34
type: Species
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boundary condition: false
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initial concentration: NaN
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metaid R 807
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product: 877551
modifier: 877563
is: http://identifiers.org/ec-code/2.3.3.13
product: 877527
reactant: 877491
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product: 877539
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modifier: 877575
reactant: 877503
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877671
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877659
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877647
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877635
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value: 1.0

877623
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value: 1.0

877611
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877599
type: LocalParameter
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877551
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species: metaid M 329

metaid E 543
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877527
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species: metaid M 44

metaid M 44
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877491
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metaid M 54
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877539
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877503
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877515
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metaid E 509
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metaid M 745
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initial amount: NaN

metaid M 95
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initial concentration: NaN
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metaid E 280
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metaid M 148 0
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metaid M 471
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metaid R 10
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product: 790879
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790975
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790963
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790951
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value: 1.0

790939
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790927
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metaid Cx 1
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790855
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metaid M 773
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790879
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initial concentration: NaN
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metaid M 148
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initial concentration: NaN
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metaid M 139
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boundary condition: false
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initial concentration: NaN
initial amount: NaN

metaid E 553
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initial concentration: NaN
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metaid E 569
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initial concentration: NaN
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metaid R 439
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reactant: 835547
product: 835571
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product: 835559
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835655
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835643
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835631
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835619
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835607
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835547
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835571
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metaid M 573
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835535
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metaid M 256
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initial concentration: NaN
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835559
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metaid M 23
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metaid M 731
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883017
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882993
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879969
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metaid R 1016
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