BIOMD0000000376
type: SBMLModel
parameter: COPASI52
rule: metaid_0000220
parameter: COPASI13
parameter: COPASI115
parameter: metaid_0000140
rule: metaid_0000257
rule: metaid_0000216
rule: metaid_0000182
parameter: COPASI40
rule: metaid_0000232
parameter: COPASI103
rule: metaid_0000211
parameter: COPASI7
parameter: COPASI69
rule: metaid_0000188
rule: metaid_0000167
parameter: COPASI97
rule: metaid_0000217
rule: metaid_0000183
parameter: COPASI3
rule: metaid_0000233
rule: metaid_0000179
parameter: COPASI85
species: metaid_0000270
parameter: COPASI93
rule: metaid_0000195
rule: metaid_0000189
parameter: COPASI65
species: metaid_0000265
parameter: COPASI19
parameter: COPASI18
parameter: COPASI128
parameter: COPASI73
rule: metaid_0000240
rule: metaid_0000180
parameter: COPASI81
is version of: GO:0044342
is: MODEL7889980156
parameter: COPASI117
rule: metaid_0000196
parameter: COPASI61
parameter: COPASI21
parameter: COPASI14
parameter: COPASI124
rule: metaid_0000247
rule: metaid_0000171
parameter: COPASI113
species: metaid_0000262
rule: metaid_0000181
parameter: COPASI8
parameter: COPASI132
rule: metaid_0000177
parameter: metaid_0000159
rule: metaid_0000248
time units: 709214
parameter: COPASI101
parameter: COPASI100
rule: metaid_0000207
rule: metaid_0000193
is described by: http://identifiers.org/pubmed/17172305
rule: metaid_0000172
parameter: COPASI78
parameter: COPASI99
parameter: COPASI98
rule: metaid_0000198
parameter: COPASI59
parameter: metaid_0000139
rule: metaid_0000223
parameter: COPASI120
parameter: metaid_0000147
parameter: COPASI4
parameter: COPASI66
parameter: COPASI39
parameter: COPASI86
parameter: COPASI47
parameter: COPASI94
rule: metaid_0000229
rule: metaid_0000208
parameter: COPASI55

COPASI52
type: Parameter
constant: false
value: 69.0195164600455
name: topa6

COPASI13
type: Parameter
is: SBO:0000009
constant: true
value: 300.0
name: gkCa

COPASI115
type: Parameter
is: SBO:0000009
constant: true
value: 2500.0
name: atot

metaid_0000140
type: Parameter
constant: false
value: 8514.42406191459
name: bottom4

COPASI40
type: Parameter
constant: false
value: 0.1630818
name: topa3

COPASI103
type: Parameter
is: SBO:0000009
constant: true
value: 0.01
name: p23

COPASI7
type: Parameter
constant: false
value: 1.50710358059757E-4
name: n_infinity

COPASI69
type: Parameter
constant: false
value: 3112.8828854517
name: topa14

COPASI97
type: Parameter
constant: false
value: 1.1239508472473
name: JANT

COPASI3
type: Parameter
is: SBO:0000258
constant: true
value: 5300.0
name: cm

COPASI85
type: Parameter
constant: false
value: 9.6
name: NADm

metaid_0000270
type: Species
is version of: CHEBI:29108
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: 0.17
in compartment: metaid_0000166
name: c

metaid_0000166
type: Compartment
constant: true
size: 1.0
spatial dimensions: 3.0
name: Compartment

COPASI93
type: Parameter
constant: false
value: 3.38704781122868
name: JHatp

COPASI65
type: Parameter
constant: false
value: 3112.8828854517
name: topa12

metaid_0000265
type: Species
is version of: CHEBI:16908
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: 0.4
in compartment: metaid_0000166
name: NADHm

COPASI19
type: Parameter
constant: false
value: 10871.9258612131
name: bottomo

COPASI18
type: Parameter
constant: false
value: 110.233638969723
name: topo

COPASI128
type: Parameter
is: SBO:0000009
constant: true
value: 0.01
name: fer

COPASI73
type: Parameter
constant: false
value: 4662.15266530272
name: topa16

COPASI81
type: Parameter
is: SBO:0000009
constant: true
value: 0.6
name: p4

COPASI117
type: Parameter
is: SBO:0000009
constant: true
value: 0.01
name: fcyt

COPASI61
type: Parameter
constant: false
value: 16521.1939655256
name: bottom10

COPASI21
type: Parameter
constant: false
value: 153.495
name: adp3m

COPASI14
type: Parameter
is: SBO:0000009
constant: true
value: 0.5
name: kd

COPASI124
type: Parameter
constant: false
value: 0.068
name: JSERCA

COPASI113
type: Parameter
is: SBO:0000009
constant: true
value: 5.0E-5
name: khydbas

metaid_0000262
type: Species
is version of: GO:0005251
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: 0.0
in compartment: metaid_0000166
name: n

COPASI8
type: Parameter
constant: true
value: 20.0
name: tau_n

COPASI132
type: Parameter
constant: false
value: 0.0733082706766917
name: delta

metaid_0000159
type: Parameter
is: SBO:0000009
constant: true
value: 35.0
name: p16

COPASI101
type: Parameter
is: SBO:0000009
constant: true
value: 0.04
name: p21

COPASI100
type: Parameter
constant: false
value: 0.157794
name: Juni

COPASI78
type: Parameter
is: SBO:0000009
constant: true
value: 5.0E-4
name: JGPDHbas

COPASI99
type: Parameter
constant: false
value: 0.351351351351351
name: RATm

COPASI98
type: Parameter
is: SBO:0000009
constant: true
value: 0.037410133
name: FRT

COPASI59
type: Parameter
constant: false
value: 7037.00378787879
name: weight10

metaid_0000139
type: Parameter
constant: false
value: 8445.56762725454
name: bottom3

COPASI120
type: Parameter
is: SBO:0000009
constant: true
value: 4.5E-6
name: alpha

metaid_0000147
type: Parameter
constant: false
value: 19526.1135763608
name: bottom12

COPASI4
type: Parameter
constant: false
value: 0.0
name: Ik

COPASI66
type: Parameter
constant: false
value: 36.0
name: weight13

COPASI39
type: Parameter
constant: false
value: 0.0
name: topa2

COPASI86
type: Parameter
is: SBO:0000009
constant: true
value: 10.0
name: NADmtot

COPASI47
type: Parameter
constant: false
value: 68.8564346600455
name: weight4

COPASI94
type: Parameter
constant: false
value: 4.0E-4
name: JGK_ms

COPASI55
type: Parameter
constant: false
value: 37.1824747164245
name: weight8

COPASI54
type: Parameter
constant: false
value: 70.7807999000455
name: topa7

metaid_0000156
type: Parameter
constant: true
value: 10.0
name: p13

metaid_0000155
type: Parameter
is: SBO:0000009
constant: true
value: 5.0
name: p11

metaid_0000163
type: Parameter
is: SBO:0000009
constant: true
value: 2.0
name: p20

COPASI27
type: Parameter
constant: false
value: 90.3
name: F6P

COPASI74
type: Parameter
constant: false
value: 1467.7362
name: topb

COPASI35
type: Parameter
is: SBO:0000009
constant: true
value: 50000.0
name: k3

COPASI82
type: Parameter
is: SBO:0000009
constant: true
value: 0.1
name: p5

COPASI42
type: Parameter
is: SBO:0000009
constant: true
value: 0.02
name: f13

COPASI16
type: Parameter
constant: true
value: 16000.0
name: gkATP_

COPASI126
type: Parameter
constant: false
value: 9.65999999999995E-4
name: Jer

metaid_0000143
type: Parameter
constant: false
value: 9430.34103626368
name: bottom7

metaid_0000151
type: Parameter
constant: false
value: 23339.1159653027
name: bottom16

COPASI62
type: Parameter
constant: false
value: 135.9015
name: weight11

metaid_0000264
type: Species
is version of: CHEBI:16905
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: 2.16
in compartment: metaid_0000166
name: FBP

COPASI23
type: Parameter
constant: false
value: 7.34846922834953E-4
name: JGPDH

COPASI70
type: Parameter
constant: false
value: 1467.7362
name: weight15

COPASI30
type: Parameter
is: SBO:0000009
constant: true
value: 1.0
name: bottom1

COPASI51
type: Parameter
constant: false
value: 911.995690909091
name: weight6

COPASI12
type: Parameter
constant: false
value: 466.296163499462
name: Ikca

metaid_0000267
type: Species
is version of: CHEBI:29108
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: 0.2
in compartment: metaid_0000166
name: Cam

COPASI122
type: Parameter
constant: false
value: 0.068966
name: Jleak

metaid_0000149
type: Parameter
constant: false
value: 20322.1099854517
name: bottom14

COPASI130
type: Parameter
is: SBO:0000009
constant: true
value: 0.001
name: gamma

COPASI68
type: Parameter
constant: false
value: 759.996409090909
name: weight14

COPASI89
type: Parameter
constant: false
value: 5.21282484607726
name: JHres

COPASI49
type: Parameter
constant: false
value: 2.16
name: weight5

COPASI96
type: Parameter
constant: false
value: 0.298
name: JHleak

COPASI57
type: Parameter
constant: false
value: 16.6666666666667
name: weight9

ORG:
  orgname: The University of Auckland,The Bioengineering Institute
n:
  given: Catherine
  family: Lloyd

metaid_0000165
type: Parameter
constant: false
value: 0.00445042955138744
name: Jmito

COPASI29
type: Parameter
constant: false
value: 3.74364085279847E-4
name: JPFK_ms

COPASI77
type: Parameter
is: SBO:0000009
constant: true
value: 0.01
name: p3

COPASI76
type: Parameter
is: SBO:0000009
constant: false
value: 0.451601160351069
name: JPDH

metaid_0000271
type: Species
is version of: CHEBI:29108
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: 345.0
in compartment: metaid_0000166
name: Caer

COPASI37
type: Parameter
is: SBO:0000009
constant: true
value: 5.0
name: VmaxPFK

W3 CDTF: Thu Sep 29 23:13:00 BST 2011

COPASI84
type: Parameter
is: SBO:0000009
constant: true
value: 5.0
name: p7

COPASI45
type: Parameter
is: SBO:0000009
constant: true
value: 20.0
name: f42

COPASI92
type: Parameter
constant: false
value: 1.12901593707623
name: JF1F0

metaid_0000153
type: Parameter
is: SBO:0000009
constant: true
value: 1.0
name: p2

metaid_0000161
type: Parameter
is: SBO:0000009
constant: true
value: -0.03
name: p18

COPASI64
type: Parameter
constant: false
value: 2869.01811083523
name: weight12

metaid_0000266
type: Species
is: SBO:0000009
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: 164.0
in compartment: metaid_0000166
name: delta_psi

COPASI72
type: Parameter
constant: false
value: 1549.26977985102
name: weight16

COPASI109
type: Parameter
is: SBO:0000009
constant: true
value: 15.0
name: Amtot

COPASI33
type: Parameter
is: SBO:0000009
constant: true
value: 30.0
name: k1

COPASI32
type: Parameter
is: SBO:0000009
constant: true
value: 0.0
name: topa1

COPASI135
type: Parameter
is: SBO:0000009
constant: true
value: 500.0
name: AMP

COPASI80
type: Parameter
constant: false
value: 0.446813558235194
name: JO

COPASI108
type: Parameter
constant: false
value: 3.9
name: ATPm

COPASI53
type: Parameter
constant: false
value: 1.76128344
name: weight7

metaid_0000141
type: Parameter
constant: false
value: 8516.58406191459
name: bottom5

metaid_0000269
type: Species
is version of: CHEBI:16761
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: 1137.0
in compartment: metaid_0000166
name: adp

COPASI60
type: Parameter
constant: false
value: 107.96327461647
name: topa10

COPASI20
type: Parameter
constant: false
value: 187.605
name: mgadp

COPASI123
type: Parameter
is: SBO:0000009
constant: true
value: 2.0E-4
name: pleak

COPASI41
type: Parameter
constant: false
value: 0.1630818
name: weight3

COPASI104
type: Parameter
is: SBO:0000009
constant: true
value: 0.016
name: p24

COPASI112
type: Parameter
is: SBO:0000009
constant: true
value: 5.0E-5
name: khyd

COPASI111
type: Parameter
constant: false
value: 0.0797355
name: Jhyd

COPASI131
type: Parameter
is: SBO:0000009
constant: true
value: 0.001
name: kappa

metaid_0000158
type: Parameter
is: SBO:0000009
constant: true
value: 8.5
name: p15

metaid_0000138
type: Parameter
constant: false
value: 8445.40454545454
name: bottom2

COPASI58
type: Parameter
constant: false
value: 107.96327461647
name: topa9

metaid_0000146
type: Parameter
constant: false
value: 16657.0954655256
name: bottom11

COPASI38
type: Parameter
constant: false
value: 8444.40454545454
name: weight2

COPASI46
type: Parameter
is: SBO:0000009
constant: true
value: 20.0
name: f41

COPASI129
type: Parameter
is: SBO:0000009
constant: true
value: 31.0
name: Vc_Ver

metaid_0000154
type: Parameter
is: SBO:0000009
constant: true
value: 177.0
name: p10

metaid_0000162
type: Parameter
is: SBO:0000009
constant: true
value: 0.35
name: p19

COPASI118
type: Parameter
constant: false
value: 0.00117528734232577
name: Jmem

COPASI34
type: Parameter
is: SBO:0000009
constant: true
value: 1.0
name: k2

COPASI15
type: Parameter
constant: false
value: 2433.43025793791
name: Ikatp

COPASI125
type: Parameter
is: SBO:0000009
constant: true
value: 0.4
name: kSERCA

metaid_0000142
type: Parameter
constant: false
value: 9428.57975282368
name: bottom6

metaid_0000150
type: Parameter
constant: false
value: 21789.8461854517
name: bottom15

COPASI106
type: Parameter
is: SBO:0000009
constant: true
value: 0.01
name: fmito

COPASI114
type: Parameter
constant: false
value: 1363.0
name: atp

COPASI22
type: Parameter
constant: false
value: 68.15
name: atp4m

metaid_0000261
type: Species
is: PATO:0001462
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: -60.0
in compartment: metaid_0000166
name: Vm

metaid_0000268
type: Species
is version of: CHEBI:16761
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: 11.1
in compartment: metaid_0000166
name: ADPm

COPASI50
type: Parameter
constant: false
value: 69.0195164600455
name: topa5

COPASI9
type: Parameter
constant: false
value: -2927.84163162795
name: Ica

COPASI134
type: Parameter
is: SBO:0000009
constant: true
value: 25.0
name: VCa

COPASI133
type: Parameter
is: SBO:0000009
constant: true
value: -75.0
name: VK

COPASI11
type: Parameter
constant: false
value: 0.0344451956662112
name: m_infinity

COPASI10
type: Parameter
is: SBO:0000009
constant: true
value: 1000.0
name: gCa

COPASI102
type: Parameter
constant: false
value: 0.162244429551387
name: JNaCa

COPASI121
type: Parameter
is: SBO:0000009
constant: true
value: 0.05
name: Cbas

metaid_0000148
type: Parameter
constant: false
value: 19562.1135763608
name: bottom13

COPASI5
type: Parameter
is: SBO:0000009
constant: true
value: 2700.0
name: gK

COPASI67
type: Parameter
constant: false
value: 3112.8828854517
name: topa13

COPASI88
type: Parameter
is: SBO:0000009
constant: true
value: 1.8
name: Cmito

COPASI48
type: Parameter
constant: false
value: 69.0195164600455
name: topa4

COPASI95
type: Parameter
is: SBO:0000009
constant: true
value: 0.4
name: JGK

COPASI56
type: Parameter
constant: false
value: 107.96327461647
name: topa8

metaid_0000157
type: Parameter
constant: true
value: 190.0
name: p14

metaid_0000164
type: Parameter
is: SBO:0000009
constant: true
value: 1.1
name: p22

COPASI28
type: Parameter
constant: false
value: 0.374364085279846
name: JPFK

COPASI75
type: Parameter
is: SBO:0000009
constant: true
value: 0.06
name: lambda

COPASI36
type: Parameter
is: SBO:0000009
constant: true
value: 220.0
name: k4

COPASI83
type: Parameter
is: SBO:0000009
constant: true
value: 177.0
name: p6

metaid_0000145
type: Parameter
constant: false
value: 9484.19017764677
name: bottom9

COPASI119
type: Parameter
is: SBO:0000009
constant: true
value: 0.1
name: kPMCA

COPASI44
type: Parameter
is: SBO:0000009
constant: true
value: 0.2
name: f23

COPASI91
type: Parameter
constant: true
value: 0.1
name: p9

COPASI43
type: Parameter
is: SBO:0000009
constant: true
value: 20.0
name: f43

COPASI17
type: Parameter
constant: false
value: 0.010139292741408
name: katpo

COPASI90
type: Parameter
is: SBO:0000009
constant: true
value: 7.0
name: p8

metaid_0000144
type: Parameter
constant: false
value: 9467.52351098011
name: bottom8

metaid_0000152
type: Parameter
is: SBO:0000009
constant: true
value: 400.0
name: p1

W3 CDTF: Thu Mar 08 12:56:32 GMT 2012

metaid_0000160
type: Parameter
is: SBO:0000009
constant: true
value: 0.002
name: p17

COPASI63
type: Parameter
constant: false
value: 243.86477461647
name: topa11

COPASI24
type: Parameter
is: SBO:0000009
constant: true
value: 5.0E-4
name: kGPDH

metaid_0000263
type: Species
is version of: CHEBI:14314
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: 301.0
in compartment: metaid_0000166
name: G6P

COPASI71
type: Parameter
constant: false
value: 3112.8828854517
name: topa15

COPASI31
type: Parameter
is: SBO:0000009
constant: true
value: 1.0
name: weight1

ORG:
  orgname: EMBL-EBI
n:
  given: Ishan
  family: Ajmera