BIOMD0000000364
type: SBMLModel
reaction: 23
parameter: 45
occurs in: http://identifiers.org/taxonomy/2759
length unit: length
is: MODEL1108260002
reaction: 29
species: 10
reaction: 18
is: GO:0007596
reaction: 28
species: 9
reaction: 30
parameter: 52
units def: 671381
parameter: 34
species: 6
species: 4
parameter: 51
parameter: 47
parameter: 32
parameter: 39
reaction: 16
species: 14
parameter: 46
parameter: 31
species: 1
reaction: 15
reaction: 22
parameter: 44
created:
  W3 CDTF: Fri Aug 26 17:37:45 BST 2011
species: 11
area units: 498119
is described by: http://identifiers.org/pubmed/20435402
reaction: 27
parameter: 37
reaction: 21
reaction: 26
species: 7
reaction: 20
parameter: 50
parameter: 38
species: 2
reaction: 25
species: 12
parameter: 43
reaction: 24
time units: 628102
volume units: 498095
substance units: 671381
parameter: 42
reaction: 19
compartment: 53
curated: true
creator:
  ORG:
    orgname: EBI
  n:
    given: Michael
    family: Schubert
parameter: 36
species: 8
parameter: 35
parameter: 49
modified:
  W3 CDTF: Fri Apr 20 21:01:39 BST 2012
parameter: 41
name: Lee2010_ThrombinActivation_OneForm
parameter: 48
parameter: 33
species: 5
species: 3
parameter: 40
reaction: 17
species: 13

23
type: Reaction
kinetic law: 671815
product: 671803
product: 671791
reactant: 671779
fast: false
reversible: false
name: r9

671803
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 10

10
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 53
name: P2

53
type: Compartment
constant: true
size: 1.0
spatial dimensions: 3.0
name: compartment

671791
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 1

1
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.5E-4
initial amount: NaN
in compartment: 53
name: E

671779
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 9

9
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 53
name: E_P_2

45
type: Parameter
is: SBO:0000035
constant: true
value: 2.39E-6
name: kC1

29
type: Reaction
kinetic law: 672080
product: 672068
reactant: 672056
fast: false
reversible: false
name: r15

672068
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 8

8
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 53
name: T

672056
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 2

2
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 53
name: E_P_1

18
type: Reaction
kinetic law: 671574
product: 671562
reactant: 671550
reactant: 671538
fast: false
reversible: true
name: r4

671562
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 6

6
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 53
name: E_M1

671550
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 5

5
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 53
name: M1

671538
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 1

28
type: Reaction
kinetic law: 672044
product: 672032
product: 672020
reactant: 672008
fast: false
reversible: false
name: r14

672032
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 8

672020
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 1

672008
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 13

13
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 53
name: E_P2

30
type: Reaction
kinetic law: 672116
product: 672104
reactant: 672092
fast: false
reversible: false
name: r16

672104
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 8

672092
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 9

52
type: Parameter
is: SBO:0000038
constant: true
value: 2.66E-5
name: j7a

671381
type: SBMLUnitsDef
unit: 671393
name: substance

671393
type: SBMLUnit
exponent: 1.0
scale: -6
multipler: 1.0
kind: MOLE

34
type: Parameter
is: SBO:0000036
constant: true
value: 38.1
name: k3

4
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 53
name: M

51
type: Parameter
is: SBO:0000038
constant: true
value: 4.46E-9
name: j7

47
type: Parameter
is: SBO:0000038
constant: true
value: 33.4
name: j1

32
type: Parameter
is: SBO:0000035
constant: true
value: 82.4
name: k2

39
type: Parameter
is: SBO:0000035
constant: true
value: 32.3
name: k6

16
type: Reaction
kinetic law: 671490
product: 671478
product: 671465
reactant: 671453
fast: false
reversible: false
name: r2

671478
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 4

671465
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 1

671453
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 2

14
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 53
name: E_P1

46
type: Parameter
is: SBO:0000035
constant: true
value: 0.031
name: kC2

31
type: Parameter
is: SBO:0000036
constant: true
value: 91.8
name: k1

15
type: Reaction
kinetic law: 671441
product: 671429
reactant: 671417
reactant: 671405
fast: false
reversible: true
name: r1

671429
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 2

671417
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 3

3
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.0
initial amount: NaN
in compartment: 53
name: P

671405
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 1

22
type: Reaction
kinetic law: 671766
product: 671754
reactant: 671742
reactant: 671730
fast: false
reversible: true
name: r8

671754
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 9

671742
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 3

671730
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 1

44
type: Parameter
is: SBO:0000035
constant: true
value: 42.6
name: k8a

11
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 53
name: P21

27
type: Reaction
kinetic law: 671996
product: 671984
product: 671972
reactant: 671960
fast: false
reversible: false
name: r13

671984
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 8

671972
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 1

671960
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 12

12
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 53
name: E_P21

37
type: Parameter
is: SBO:0000035
constant: true
value: 209.9
name: k4a

21
type: Reaction
kinetic law: 671718
product: 671706
product: 671694
reactant: 671682
fast: false
reversible: false
name: r7

671706
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 8

671694
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 1

671682
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 7

7
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 53
name: E_M

26
type: Reaction
kinetic law: 671948
product: 671935
reactant: 671923
reactant: 671911
fast: false
reversible: true
name: r12

671935
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 13

671923
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 10

671911
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 1

20
type: Reaction
kinetic law: 671670
product: 671658
product: 671646
reactant: 671634
fast: false
reversible: false
name: r6

671658
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 8

671646
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 1

671634
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 6

50
type: Parameter
is: SBO:0000038
constant: true
value: 21.8
name: j5

38
type: Parameter
is: SBO:0000036
constant: true
value: 5.16
name: k5

25
type: Reaction
kinetic law: 671899
product: 671887
reactant: 671875
reactant: 671863
fast: false
reversible: true
name: r11

671887
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 12

671875
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 11

671863
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 1

43
type: Parameter
is: SBO:0000035
constant: true
value: 0.00599
name: k8

24
type: Reaction
kinetic law: 671851
product: 671839
reactant: 671827
fast: false
reversible: false
name: r10

671839
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 11

671827
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 10

42
type: Parameter
is: SBO:0000036
constant: true
value: 4.7
name: k7a

19
type: Reaction
kinetic law: 671622
product: 671610
reactant: 671598
reactant: 671586
fast: false
reversible: true
name: r5

671610
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 7

671598
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 4

671586
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 1

36
type: Parameter
is: SBO:0000035
constant: true
value: 38.1
name: k4

35
type: Parameter
is: SBO:0000036
constant: true
value: 151.5
name: k3a

49
type: Parameter
is: SBO:0000038
constant: true
value: 0.185
name: j3a

41
type: Parameter
is: SBO:0000036
constant: true
value: 6.76E-8
name: k7

48
type: Parameter
is: SBO:0000038
constant: true
value: 1.58E-6
name: j3

33
type: Parameter
is: SBO:0000035
constant: true
value: 3.12E-8
name: k9

40
type: Parameter
is: SBO:0000035
constant: true
value: 7.23E-10
name: k10

17
type: Reaction
kinetic law: 671526
product: 671514
reactant: 671502
fast: false
reversible: false
name: r3

671514
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 5

671502
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 4