BIOMD0000000357
type: SBMLModel
parameter: 20
reaction: 11
reaction: 15
modified:
  W3 CDTF: Fri Jun 07 17:14:37 BST 2013
parameter: 18
curated: true
parameter: 23
parameter: 26
compartment: 30
is described by: http://identifiers.org/pubmed/20435402
parameter: 29
reaction: 12
reaction: 13
reaction: 16
is version of: GO:0003804
volume units: 498095
species: 5
parameter: 21
parameter: 24
species: 1
parameter: 19
occurs in: http://identifiers.org/taxonomy/2759
substance units: 377942
is: MODEL1108260003
parameter: 27
species: 9
reaction: 10
reaction: 14
created:
  W3 CDTF: Fri Aug 26 17:35:05 BST 2011
species: 8
species: 4
creator:
  ORG:
    orgname: EBI
  n:
    given: Michael
    family: Schubert
parameter: 22
reaction: 17
is version of: GO:0007596
time units: metaid_0000075
parameter: 25
parameter: 28
name: Lee2010_ThrombinActivation_OneForm_reduced
species: 7
area units: 498119
length unit: length
species: 3
units def: 377942
species: 6
species: 2

20
type: Parameter
is: SBO:0000036
constant: true
value: 151.5
name: k3a

11
type: Reaction
kinetic law: 378052
reversible: false
fast: false
product: 378027
product: 378040
reactant: 378015
is version of: GO:0004252
name: r2
is version of: http://identifiers.org/ec-code/3.4.21.6

378027
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 1

1
type: Species
is version of: PR:000007294
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.5E-4
initial amount: NaN
in compartment: 30
name: E

30
type: Compartment
constant: true
size: 1.0
spatial dimensions: 3.0
name: compartment

378040
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 4

4
type: Species
is version of: PR:000007299
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 30
name: M

378015
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 2

2
type: Species
in compartment: 30
constant: false
initial amount: NaN
has only substance units: false
name: E_P_1
has part: PR:000007299
has part: PR:000007294
boundary condition: false
initial concentration: 0.0

15
type: Reaction
product: 378232
reactant: 378208
name: r9
reversible: false
kinetic law: 378244
is version of: GO:0004252
fast: false
is version of: http://identifiers.org/ec-code/3.4.21.6
product: 378220

378232
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 8

8
type: Species
has part: PR:000007299
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 30
name: P2

378208
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 7

7
type: Species
initial concentration: 0.0
boundary condition: false
has only substance units: false
initial amount: NaN
name: E_P_2
has part: PR:000007294
in compartment: 30
has part: PR:000007299
constant: false

378220
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 1

18
type: Parameter
is: SBO:0000036
constant: true
value: 91.8
name: k1

23
type: Parameter
is: SBO:0000035
constant: true
value: 32.3
name: k6

26
type: Parameter
is: SBO:0000038
constant: true
value: 33.4
name: j1

29
type: Parameter
is: SBO:0000038
constant: true
value: 2.66E-5
name: j7a

12
type: Reaction
kinetic law: 378100
product: 378088
reactant: 378076
reactant: 378064
fast: false
reversible: true
name: r5

378088
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 5

5
type: Species
has only substance units: false
name: E_M
boundary condition: false
in compartment: 30
constant: false
has part: PR:000007299
has part: PR:000007294
initial concentration: 0.0
initial amount: NaN

378076
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 4

378064
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 1

13
type: Reaction
kinetic law: 378148
reversible: false
product: 378136
is version of: GO:0004252
reactant: 378112
name: r7
fast: false
is version of: http://identifiers.org/ec-code/3.4.21.6
product: 378124

378136
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 6

6
type: Species
is version of: PR:000007299
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 30
name: T

378112
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 5

378124
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 1

16
type: Reaction
kinetic law: 378292
product: 378280
reactant: 378268
reactant: 378256
fast: false
reversible: true
name: r12

378280
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 9

9
type: Species
initial amount: NaN
in compartment: 30
has part: PR:000007294
constant: false
initial concentration: 0.0
name: E_P2
has part: PR:000007299
boundary condition: false
has only substance units: false

378268
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 8

378256
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 1

21
type: Parameter
is: SBO:0000035
constant: true
value: 209.9
name: k4a

24
type: Parameter
is: SBO:0000036
constant: true
value: 4.7
name: k7a

19
type: Parameter
is: SBO:0000035
constant: true
value: 82.4
name: k2

377942
type: SBMLUnitsDef
unit: 377954
name: substance

377954
type: SBMLUnit
exponent: 1.0
scale: -6
multipler: 1.0
kind: MOLE

27
type: Parameter
is: SBO:0000038
constant: true
value: 0.185
name: j3a

10
type: Reaction
kinetic law: 378003
product: 377991
reactant: 377979
reactant: 377966
fast: false
reversible: true
name: r1

377991
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 2

377979
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 3

3
type: Species
is version of: PR:000007299
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.0
initial amount: NaN
in compartment: 30
name: P

377966
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 1

14
type: Reaction
kinetic law: 378196
product: 378184
reactant: 378172
reactant: 378160
fast: false
reversible: true
name: r8

378184
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 7

378172
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 3

378160
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 1

22
type: Parameter
is: SBO:0000036
constant: true
value: 5.16
name: k5

17
type: Reaction
name: r14
fast: false
is version of: GO:0004252
product: 378328
reversible: false
is version of: http://identifiers.org/ec-code/3.4.21.6
kinetic law: 378340
reactant: 378304
product: 378316

378328
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 6

378304
type: SpeciesReference
is: SBO:0000010
stoichiometry: 1.0
species: 9

378316
type: SpeciesReference
is: SBO:0000011
stoichiometry: 1.0
species: 1

25
type: Parameter
is: SBO:0000035
constant: true
value: 42.6
name: k8a

28
type: Parameter
is: SBO:0000038
constant: true
value: 21.8
name: j5