BIOMD0000000209
type: SBMLModel
reaction: metaid_0000079
parameter: metaid_0000085
species: metaid_0000060
parameter: metaid_0000010
species: metaid_0000056
parameter: metaid_0000007
parameter: metaid_0000047
units def: metaid_0000004
parameter: metaid_0000024
parameter: metaid_0000034
is version of: GO:0042663
parameter: metaid_0000033
parameter: metaid_0000020
parameter: metaid_0000030
species: metaid_0000053
reaction: metaid_0000074
reaction: metaid_0000073
species: metaid_0000064
is described by: http://identifiers.org/pubmed/18941526
volume units: metaid_0000005
parameter: metaid_0000014
species: metaid_0000061
is version of: GO:0048863
parameter: metaid_0000029
parameter: metaid_0000028
parameter: metaid_0000038
parameter: metaid_0000037
reaction: metaid_0000072
reaction: metaid_0000081
reaction: metaid_0000071
parameter: metaid_0000045
reaction: metaid_0000080
species: metaid_0000087
parameter: metaid_0000041
species: metaid_0000067
parameter: metaid_0000040
parameter: metaid_0000050
time units: metaid_0000006
is version of: GO:0001830
curated: true
species: metaid_0000069
parameter: metaid_0000012
parameter: metaid_0000011
parameter: metaid_0000009
name: Chickarmane2008 - Stem cell lineage determination
parameter: metaid_0000008
parameter: metaid_0000018
parameter: metaid_0000049
parameter: metaid_0000048
parameter: metaid_0000035
parameter: metaid_0000032
species: metaid_0000055
parameter: metaid_0000031
reaction: metaid_0000076
reaction: metaid_0000075
is: MODEL8390025091
units def: metaid_0000005
parameter: metaid_0000016
parameter: metaid_0000015
parameter: metaid_0000021
species: metaid_0000063
species: metaid_0000057
parameter: metaid_0000039
substance units: metaid_0000004
reaction: metaid_0000082
species: metaid_0000059
parameter: metaid_0000046
parameter: metaid_0000043
parameter: metaid_0000042
parameter: metaid_0000052
parameter: metaid_0000051
parameter: metaid_0000025
species: metaid_0000070
is derived from: BIOMD0000000204
species: metaid_0000086
species: metaid_0000066
parameter: metaid_0000013
parameter: metaid_0000019
parameter: metaid_0000083

metaid_0000079
type: Reaction
name: R9
product: 465639
fast: false
reversible: false
kinetic law: 465675
modifier: 465663
is version of: GO:0010467
modifier: 465651
reactant: 465627

465639
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000068

metaid_0000068
type: Species
is version of: Q15406
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.01
initial amount: NaN
in compartment: metaid_0000003

metaid_0000003
type: Compartment
is version of: GO:0005623
constant: true
size: 1.0
spatial dimensions: 3.0
name: cell

metaid_0000066
type: Species
is version of: Q92908
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.01
initial amount: NaN
in compartment: metaid_0000003

metaid_0000067
type: Species
is version of: Q99626
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.01
initial amount: NaN
in compartment: metaid_0000003

465627
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000058

metaid_0000058
type: Species
encodes: Q15406
is version of: ENSG00000148200
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003

metaid_0000085
type: Parameter
constant: true
value: 10.0
name: q3

metaid_0000060
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003

metaid_0000010
type: Parameter
constant: true
value: 0.025
name: a3

metaid_0000056
type: Species
encodes: Q92908
is version of: ENSG00000141448
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003

metaid_0000007
type: Parameter
constant: true
value: 0.001
name: a0

metaid_0000047
type: Parameter
constant: true
value: 2.5E-4
name: p2

metaid_0000004
type: SBMLUnitsDef
unit: 465154
name: arb_substance

465154
type: SBMLUnit
exponent: 1.0
scale: 0
multipler: 1.0
kind: DIMENSIONLESS

metaid_0000024
type: Parameter
constant: true
value: 0.05
name: d3

metaid_0000034
type: Parameter
constant: true
value: 0.001
name: g0

metaid_0000033
type: Parameter
constant: true
value: 0.1
name: gamma3

metaid_0000020
type: Parameter
constant: true
value: 0.025
name: c2

metaid_0000030
type: Parameter
constant: true
value: 0.1
name: f1

metaid_0000053
type: Species
encodes: Q01860
is version of: ENSG00000204531
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003

metaid_0000074
type: Reaction
kinetic law: 465411
product: 465399
reactant: 465386
is version of: GO:0030163
fast: false
reversible: false
name: R4

465399
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000060

465386
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000064

metaid_0000064
type: Species
is version of: Q6ZRP7
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.01
initial amount: NaN
in compartment: metaid_0000003

metaid_0000073
type: Reaction
modifier: 465350
reactant: 465326
reversible: false
kinetic law: 465374
product: 465338
modifier: 465362
name: R3
is version of: GO:0010467
fast: false

metaid_0000063
type: Species
is version of: Q01860
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.01
initial amount: NaN
in compartment: metaid_0000003

465326
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000055

metaid_0000055
type: Species
encodes: Q6ZRP7
encodes: ENSG00000165661
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003

465338
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000064

metaid_0000065
type: Species
is version of: Q8N7R0
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.01
initial amount: NaN
in compartment: metaid_0000003

metaid_0000005
type: SBMLUnitsDef
unit: 465167
name: arb_volume

465167
type: SBMLUnit
exponent: 1.0
scale: 0
multipler: 1.0
kind: LITRE

metaid_0000014
type: Parameter
constant: true
value: 0.025
name: b3

metaid_0000061
type: Species
is version of: P04637
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003

metaid_0000029
type: Parameter
constant: true
value: 0.001
name: f0

metaid_0000028
type: Parameter
constant: true
value: 0.1
name: e2

metaid_0000038
type: Parameter
constant: true
value: 0.1
name: gamma4

metaid_0000037
type: Parameter
constant: true
value: 5.0
name: h1

metaid_0000072
type: Reaction
kinetic law: 465314
product: 465302
reactant: 465290
is version of: GO:0030163
fast: false
reversible: false
name: R2

465302
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000060

465290
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000063

metaid_0000081
type: Reaction
name: R11
reversible: false
is version of: GO:0010467
modifier: 465771
modifier: 465759
kinetic law: 465783
product: 465735
modifier: 465747
fast: false
reactant: 465723

metaid_0000086
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003

465735
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000066

465723
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000056

metaid_0000071
type: Reaction
modifier: 465254
modifier: 465230
kinetic law: 465278
name: R1
fast: false
is version of: GO:0010467
reversible: false
modifier: 465217
reactant: 465193
product: 465205
modifier: 465266
modifier: 465242

metaid_0000062
type: Species
is version of: GO:0042813
constant: false
boundary condition: true
has only substance units: false
initial concentration: 25.0
initial amount: NaN
in compartment: metaid_0000003

465193
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000053

465205
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000063

metaid_0000045
type: Parameter
constant: true
value: 0.1
name: p0

metaid_0000080
type: Reaction
kinetic law: 465711
product: 465699
reactant: 465687
is version of: GO:0030163
fast: false
reversible: false
name: R10

465699
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000060

465687
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000068

metaid_0000087
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003

metaid_0000041
type: Parameter
constant: true
value: 0.1
name: i2

metaid_0000040
type: Parameter
constant: true
value: 0.1
name: i1

metaid_0000050
type: Parameter
constant: true
value: 15.0
name: q2

metaid_0000006
type: SBMLUnitsDef
unit: 465180
name: arb_time

465180
type: SBMLUnit
exponent: 1.0
scale: 0
multipler: 1.0
kind: DIMENSIONLESS

metaid_0000069
type: Species
has part: Q6ZRP7
has part: Q01860
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.1
initial amount: NaN
in compartment: metaid_0000003

metaid_0000012
type: Parameter
constant: true
value: 0.001
name: b1

metaid_0000011
type: Parameter
constant: true
value: 1.0
name: b0

metaid_0000009
type: Parameter
constant: true
value: 0.005
name: a2

metaid_0000008
type: Parameter
constant: true
value: 1.0
name: a1

metaid_0000018
type: Parameter
constant: true
value: 0.001
name: c0

metaid_0000049
type: Parameter
constant: true
value: 2.5E-4
name: q1

metaid_0000048
type: Parameter
constant: true
value: 1.0
name: q0

metaid_0000035
type: Parameter
constant: true
value: 2.0
name: g1

metaid_0000032
type: Parameter
constant: true
value: 10.0
name: f3

metaid_0000031
type: Parameter
constant: true
value: 0.1
name: f2

metaid_0000076
type: Reaction
kinetic law: 465531
product: 465519
reactant: 465507
is version of: GO:0030163
fast: false
reversible: false
name: R6

465519
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000060

465507
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000065

metaid_0000075
type: Reaction
modifier: 465471
modifier: 465459
name: R5
product: 465435
modifier: 465483
reactant: 465423
modifier: 465447
reversible: false
kinetic law: 465495
fast: false
is version of: GO:0010467

465435
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000065

465423
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000054

metaid_0000054
type: Species
encodes: Q8N7R0
is version of: ENSG00000176654
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003

metaid_0000016
type: Parameter
constant: true
value: 10.0
name: b5

metaid_0000015
type: Parameter
constant: true
value: 10.0
name: b4

metaid_0000021
type: Parameter
constant: true
value: 0.001
name: d0

metaid_0000057
type: Species
encodes: Q99626
is version of: ENSG00000165556
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003

metaid_0000039
type: Parameter
constant: true
value: 0.001
name: i0

metaid_0000082
type: Reaction
kinetic law: 465819
product: 465807
reactant: 465795
is version of: GO:0030163
fast: false
reversible: false
name: R12

465807
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000060

465795
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000066

metaid_0000059
type: Species
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.01
initial amount: NaN
in compartment: metaid_0000003

metaid_0000046
type: Parameter
constant: true
value: 1.0
name: p1

metaid_0000043
type: Parameter
constant: true
value: 0.1
name: j1

metaid_0000042
type: Parameter
constant: true
value: 0.1
name: j0

metaid_0000052
type: Parameter
constant: true
value: 0.01
name: gamman

metaid_0000051
type: Parameter
constant: true
value: 0.1
name: gammag

metaid_0000025
type: Parameter
constant: true
value: 0.1
name: gamma2

metaid_0000070
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: metaid_0000003

metaid_0000013
type: Parameter
constant: true
value: 0.005
name: b2

metaid_0000019
type: Parameter
constant: true
value: 0.005
name: c1

metaid_0000083
type: Parameter
constant: true
value: 1.0
name: e3

metaid_0000078
type: Reaction
kinetic law: 465615
product: 465603
reactant: 465591
is version of: GO:0030163
fast: false
reversible: false
name: R8

465603
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000060

465591
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000067

metaid_0000077
type: Reaction
kinetic law: 465579
modifier: 465567
product: 465555
reactant: 465543
is version of: GO:0010467
fast: false
reversible: false
name: R7

465555
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000067

465543
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000057

metaid_0000017
type: Parameter
constant: true
value: 0.1
name: gamma1

metaid_0000023
type: Parameter
constant: true
value: 0.025
name: d2

metaid_0000022
type: Parameter
constant: true
value: 0.005
name: d1

ORG:
  orgname: Keck Graduate Institute, California
n:
  given: Vijay
  family: Chickarmane

metaid_0000044
type: Parameter
constant: true
value: 0.1
name: gamma5

W3 CDTF: Fri Dec 05 14:17:42 GMT 2008

metaid_0000027
type: Parameter
constant: true
value: 0.1
name: e1

metaid_0000026
type: Parameter
constant: true
value: 0.001
name: e0

metaid_0000036
type: Parameter
constant: true
value: 2.0
name: h0

ORG:
  orgname: Lund Strategic Research Centre for Stem Cell Biology and Cell Therapy, Lund University, Sweden.
n:
  given: Carsten
  family: Peterson

metaid_0000084
type: Parameter
constant: true
value: 1.0
name: f4

ORG:
  orgname: EMBL-EBI
n:
  given: Vijayalakshmi
  family: Chelliah

W3 CDTF: Wed Jun 05 17:45:56 BST 2013