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modified:
  W3 CDTF: Fri Apr 20 23:41:29 BST 2012
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occurs in: http://identifiers.org/taxonomy/131567
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created:
  W3 CDTF: Fri Dec 21 09:55:45 GMT 2007
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name: Zhu2007_TF_modulated_by_Calcium
notes: This a model from the article: A theoretical study on activation of transcription factor modulated by intracellular Ca2+ oscillations. Zhu CL, Zheng Y, Jia Y Biophys. Chem. [2007 Aug:129(1):49-55 17560007 , Abstract: This work presents both deterministic and stochastic models of genetic expression modulated by intracellular calcium (Ca2+) oscillations, based on macroscopic differential equations and chemical Langevin equations, respectively. In deterministic case, the oscillations of intracellular Ca2+ decrease the effective Ca2+ threshold for the activation of transcriptional activator (TF-A). The average activation of TF-A increases with the increase of the average amplitude of intracellular Ca2+ oscillations, but decreases with the increase of the period of intracellular Ca2+ oscillations, which are qualitatively consistent with the experimental results on the gene expression in lymphocytes. In stochastic case, it is found that a large internal fluctuation of the biochemical reaction can enhance gene expression efficiency specifically at a low level of external stimulations or at a small rate of TF-A dimer phosphorylation activated by Ca2+, which reduces the threshold of the average intracellular Ca2+ concentration for gene expression. This model originates from BioModels Database: A Database of Annotated Published Models. It is copyright (c) 2005-2009 The BioModels Team. For more information see the terms of use . To cite BioModels Database, please use Le Novère N., Bornstein B., Broicher A., Courtot M., Donizelli M., Dharuri H., Li L., Sauro H., Schilstra M., Shapiro B., Snoep J.L., Hucka M.(2006) BioModels Database: A Free, Centralized Database of Curated, Published, Quantitative Kinetic Models of Biochemical and Cellular Systems Nucleic Acids Res., 34: D689-D691.
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creator:
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    orgname: California Institute of Technology
  n:
    given: Harish
    family: Dharuri
is described by: http://identifiers.org/pubmed/17560007

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