BIOMD0000000145
type: SBMLModel
reaction: metaid_0000062
species: metaid_0000043
parameter: metaid_0000005
parameter: metaid_0000011
parameter: metaid_0000009
reaction: metaid_0000059
parameter: metaid_0000028
parameter: metaid_0000017
parameter: metaid_0000034
species: metaid_0000067
rule: metaid_0000044
curated: true
reaction: metaid_0000056
notes: The model reproduces Fig 2 A of the paper. Simulation results successfully reproduced using MathSBML and Jarnac To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information. In summary, you are entitled to use this encoded model in absolutely any manner you deem suitable, verbatim, or with modification, alone or embedded it in a larger context, redistribute it, commercially or not, in a restricted way or not. To cite BioModels Database, please use: Li C, Donizelli M, Rodriguez N, Dharuri H, Endler L, Chelliah V, Li L, He E, Henry A, Stefan MI, Snoep JL, Hucka M, Le Novère N, Laibe C (2010) BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models. BMC Syst Biol., 4:92.
parameter: metaid_0000020
is: MODEL8342350003
substance units: metaid_0000068
has part: hsa04020
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occurs in: http://identifiers.org/taxonomy/131567
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units def: metaid_0000068
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parameter: metaid_0000015
is described by: http://identifiers.org/pubmed/17188305
reaction: metaid_0000063
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reaction: metaid_0000054
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parameter: metaid_0000029
parameter: metaid_0000018
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parameter: metaid_0000035
species: metaid_0000041
modified:
  W3 CDTF: Thu Jul 05 15:37:21 BST 2012
name: Wang2007_ATP_induced_Ca_Oscillation
compartment: metaid_0000066
volume units: metaid_0000084
has part: GO:0051482
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time units: metaid_0000134
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species: metaid_0000039
parameter: metaid_0000007
reaction: metaid_0000055
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parameter: metaid_0000013
parameter: metaid_0000030
parameter: metaid_0000019
reaction: metaid_0000061
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rule: metaid_0000053
parameter: metaid_0000004
creator:
  ORG:
    orgname: California Institute of Technology
  n:
    given: Harish
    family: Dharuri
parameter: metaid_0000010
species: metaid_0000040
parameter: metaid_0000008
reaction: metaid_0000058
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parameter: metaid_0000022
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reaction: metaid_0000064
created:
  W3 CDTF: Tue Aug 28 15:35:18 BST 2007
length unit: length
area units: metaid_0000005
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parameter: metaid_0000025
parameter: metaid_0000014
parameter: metaid_0000031

metaid_0000062
type: Reaction
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product: 434836
reactant: 434824
is version of: GO:0006816
fast: false
reversible: true

434836
type: SpeciesReference
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species: metaid_0000043

metaid_0000043
type: Species
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constant: false
is: C00076
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initial concentration: 200.0
has only substance units: false
name: Calcium
is: CHEBI:29108

metaid_0000037
type: Compartment
is: GO:0005829
constant: true
size: 1.0
spatial dimensions: 3.0

434824
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species: metaid_0000042

metaid_0000042
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initial concentration: 1000.0
constant: false
name: Calcium
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metaid_0000066
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metaid_0000005
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metaid_0000011
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metaid_0000009
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metaid_0000059
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fast: false
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434740
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metaid_0000028
type: Parameter
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metaid_0000017
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metaid_0000056
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434656
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metaid_0000039
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metaid_0000020
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metaid_0000068
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434589
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multipler: 1.0
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metaid_0000026
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metaid_0000015
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metaid_0000063
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fast: false
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434860
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metaid_0000006
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434608
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metaid_0000012
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metaid_0000029
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metaid_0000018
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metaid_0000060
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metaid_0000035
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434680
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metaid_0000021
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metaid_0000027
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metaid_0000007
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metaid_0000055
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reversible: false

434632
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metaid_0000024
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metaid_0000013
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metaid_0000030
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metaid_0000019
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metaid_0000004
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reversible: false

434884
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metaid_0000025
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metaid_0000031
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