BIOMD0000000036
type: SBMLModel
reaction: metaid_0000013
reaction: metaid_0000014
species: metaid_0000008
occurs in: http://identifiers.org/taxonomy/7227
is: MODEL6619720081
notes: To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information. In summary, you are entitled to use this encoded model in absolutely any manner you deem suitable, verbatim, or with modification, alone or embedded it in a larger context, redistribute it, commercially or not, in a restricted way or not. To cite BioModels Database, please use: Li C, Donizelli M, Rodriguez N, Dharuri H, Endler L, Chelliah V, Li L, He E, Henry A, Stefan MI, Snoep JL, Hucka M, Le Novère N, Laibe C (2010) BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models. BMC Syst Biol., 4:92.
compartment: metaid_0000006
time units: metaid_0000016
is described by: http://identifiers.org/pubmed/20540926
modified:
  W3 CDTF: Thu Jul 05 15:49:59 BST 2012
name: Tyson1999_CircClock
reaction: metaid_0000010
species: metaid_0000007
is: dme04710
created:
  W3 CDTF: Thu Jul 07 16:19:53 BST 2005
volume units: metaid_0000323
units def: metaid_0000016
compartment: metaid_0000004
substance units: metaid_0000009
parameter: metaid_0000003
species: metaid_0000009
curated: true
area units: area
creator:
  ORG:
    orgname: EMBL-EBI
  n:
    given: Nicolas
    family: Le Novère
length unit: length
reaction: metaid_0000011
is version of: GO:0007623
reaction: metaid_0000012

metaid_0000013
type: Reaction
kinetic law: 192435
product: 192423
reactant: 192411
is version of: GO:0030163
fast: false
reversible: false
name: protein degradation

192447
type: LocalParameter
value: 0.1
name: kp3

192423
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000007

metaid_0000007
type: Species
constant: true
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: 0.0
in compartment: metaid_0000004

metaid_0000004
type: Compartment
constant: true
size: 1.0
spatial dimensions: 3.0

192411
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000009

metaid_0000009
type: Species
is: P07663
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: 1.0
in compartment: metaid_0000006
name: Pt

metaid_0000006
type: Compartment
is version of: GO:0005737
constant: true
size: 1.0
spatial dimensions: 3.0

metaid_0000014
type: Reaction
is version of: http://identifiers.org/ec-code/2.7.1.37
kinetic law: 192483
is version of: GO:0006468
reversible: false
is version of: GO:0030163
name: Per phosphorylation and degradation
fast: false
product: 192471
reactant: 192459

192532
type: LocalParameter
value: 200.0

192520
type: LocalParameter
value: 0.05
name: Jp

192508
type: LocalParameter
value: 0.03
name: kp2

192496
type: LocalParameter
value: 10.0
name: kp1

192471
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000007

192459
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000009

metaid_0000008
type: Species
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: 1.0
in compartment: metaid_0000006

metaid_0000016
type: SBMLUnitsDef
unit: 192207
name: hour

192207
type: SBMLUnit
exponent: 1.0
scale: 0
multipler: 3600.0
kind: SECOND

metaid_0000010
type: Reaction
name: transcription
is version of: GO:0009299
reversible: false
kinetic law: 192255
modifier: 192243
product: 192231
is version of: GO:0006355
reactant: 192219
fast: false

192291
type: LocalParameter
value: 200.0

192279
type: LocalParameter
value: 0.1

192267
type: LocalParameter
value: 1.0

192231
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000008

192219
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000007

metaid_0000003
type: Parameter
constant: true
value: 6.0221367E23

metaid_0000011
type: Reaction
kinetic law: 192339
modifier: 192327
product: 192315
reactant: 192303
is version of: GO:0006412
fast: false
reversible: false
name: translation

192351
type: LocalParameter
value: 0.5
name: Vp

192315
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000009

192303
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000007

metaid_0000012
type: Reaction
kinetic law: 192387
product: 192375
reactant: 192363
is version of: GO:0006402
fast: false
reversible: false
name: mRNA degradation

192399
type: LocalParameter
value: 0.1
name: km

192375
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000007

192363
type: SpeciesReference
stoichiometry: 1.0
species: metaid_0000008