950850
stoichiometry: 1.0
species: 242583
type: SpeciesReference

746167
value: 0.0
type: LocalParameter

303058
kinetic law: 924858
product: 924845
reactant: 924832
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_nickel_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

927118
stoichiometry: 1.0
species: 251222
type: SpeciesReference

280400
type: Reaction
reactant: 778914
product: 778938
name: R_cysteine_synthase
reactant: 778902
kinetic law: 778962
notes: GENE_ASSOCIATION: ( b2414 or b2421 ) PROTEIN_ASSOCIATION: ( CysKec ) or ( CysM ) SUBSYSTEM: S_Cysteine_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
product: 778950
product: 778926

864202
units: 716537
value: 0.329252
type: LocalParameter

896398
stoichiometry: 1.0
species: 251382
type: SpeciesReference

004944
units: 716537
value: -999999.0
type: LocalParameter

303057
kinetic law: 924760
type: Reaction
name: R_nickle__Ni2__transport_out_via_proton_antiport__periplasm_
notes: GENE_ASSOCIATION: ( b3915 or b0752 ) PROTEIN_ASSOCIATION: ( FieF ) or ( ZitB ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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fast: false
reactant: 924723
product: 924748
reversible: false
reactant: 924711

312157
kinetic law: 985274
product: 985262
product: 985250
reactant: 985238
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fast: false
reversible: true
name: R_Tagatose_bisphosphate_aldolase
type: Reaction

754500
value: 0.0
type: LocalParameter

984649
stoichiometry: 1.0
species: 256002
type: SpeciesReference

799730
stoichiometry: 1.0
species: 263422
type: SpeciesReference

762658
value: 0.0
type: LocalParameter

853691
value: -0.004012
type: LocalParameter

961986
stoichiometry: 1.0
species: 255962
type: SpeciesReference

752991
units: 716537
value: 999999.0
type: LocalParameter

877464
stoichiometry: 1.0
species: 237564
type: SpeciesReference

248063
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Farnesyl_diphosphate_C15H25O7P2
type: Species

986914
stoichiometry: 1.0
species: 258902
type: SpeciesReference

816111
units: 716537
value: 0.0
type: LocalParameter

897328
stoichiometry: 1.0
species: 251382
type: SpeciesReference

749832
stoichiometry: 1.0
species: 238743
type: SpeciesReference

843224
stoichiometry: 1.0
species: 247623
type: SpeciesReference

831102
value: 0.0
type: LocalParameter

954692
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species: 256882
type: SpeciesReference

747536
value: 0.0
type: LocalParameter

975418
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type: LocalParameter

981345
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species: 251382
type: SpeciesReference

876944
stoichiometry: 1.0
species: 251342
type: SpeciesReference

859524
units: 716537
value: 999999.0
type: LocalParameter

914944
units: 716537
value: 999999.0
type: LocalParameter

989216
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type: LocalParameter

960030
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species: 259042
type: SpeciesReference

961770
stoichiometry: 1.0
species: 259142
type: SpeciesReference

965175
stoichiometry: 1.0
species: 258062
type: SpeciesReference

847349
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type: LocalParameter

835601
units: 716537
value: 0.0
type: LocalParameter

952494
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value: 0.0
type: LocalParameter

801086
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species: 257002
type: SpeciesReference

839316
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type: LocalParameter

829157
units: 716537
value: 999999.0
type: LocalParameter

983916
units: 716537
value: 0.0
type: LocalParameter

737806
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type: LocalParameter

756886
stoichiometry: 1.0
species: 243283
type: SpeciesReference

725627
units: 716537
value: 0.0
type: LocalParameter

869563
units: 716537
value: 0.0
type: LocalParameter

940751
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species: 240703
type: SpeciesReference

907003
stoichiometry: 1.0
species: 246983
type: SpeciesReference

738733
units: 716537
value: -999999.0
type: LocalParameter

003992
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type: LocalParameter

864627
stoichiometry: 1.0
species: 249962
type: SpeciesReference

242863
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Choline_C5H14NO
type: Species

760821
units: 716537
value: 0.0
type: LocalParameter

993421
value: 0.0
type: LocalParameter

916094
units: 716537
value: 0.0
type: LocalParameter

888951
value: 0.0
type: LocalParameter

284599
kinetic law: 806769
product: 806757
reactant: 806745
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Adenosine_exchange
type: Reaction

972928
value: 0.0
type: LocalParameter

822676
units: 716537
value: 999999.0
type: LocalParameter

275820
reactant: 749979
product: 750040
reactant: 749991
product: 750015
name: R_aldehyde_dehydrogenase__propanal__NADP_
fast: false
reversible: false
reactant: 750003
type: Reaction
kinetic law: 750052
product: 750028
notes: GENE_ASSOCIATION: b3588 PROTEIN_ASSOCIATION: AldB SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:

234814
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Acyl_sn_glycero_3_phosphoethanolamine__n_C141__C19H38NO7P1
type: Species

754089
units: 716537
value: 0.0
type: LocalParameter

977863
stoichiometry: 1.0
species: 238523
type: SpeciesReference

939556
stoichiometry: 1.0
species: 241883
type: SpeciesReference

875702
units: 716537
value: -999999.0
type: LocalParameter

887567
stoichiometry: 1.0
species: 252722
type: SpeciesReference

753111
units: 716537
value: 999999.0
type: LocalParameter

759673
units: 716537
value: 0.0
type: LocalParameter

988532
units: 716537
value: 0.0
type: LocalParameter

802727
units: 716537
value: -999999.0
type: LocalParameter

932802
value: -0.004012
type: LocalParameter

808377
value: -0.108332
type: LocalParameter

739180
units: 716537
value: 999999.0
type: LocalParameter

895022
units: 716537
value: 999999.0
type: LocalParameter

741081
units: 716537
value: 999999.0
type: LocalParameter

794809
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type: LocalParameter

768755
units: 716537
value: 0.0
type: LocalParameter

251662
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Hexanoyl_ACP__n_C60ACP__C17H31N2O8PRS
type: Species

004522
value: -0.004012
type: LocalParameter

941418
stoichiometry: 1.0
species: 258942
type: SpeciesReference

789014
units: 716537
value: 999999.0
type: LocalParameter

775228
value: -0.003009
type: LocalParameter

976488
stoichiometry: 1.0
species: 260261
type: SpeciesReference

782381
stoichiometry: 1.0
species: 239803
type: SpeciesReference

741757
units: 716537
value: 999999.0
type: LocalParameter

960766
stoichiometry: 1.0
species: 259121
type: SpeciesReference

743628
stoichiometry: 1.0
species: 258902
type: SpeciesReference

849454
stoichiometry: 1.0
species: 253862
type: SpeciesReference

274660
product: 742860
name: R_Adenosylcobalimin_transport_via_ton_system__extermal_
fast: false
reactant: 742824
notes: GENE_ASSOCIATION: ( b3966 and ( b1252 and b3005 and b3006 ) ) PROTEIN_ASSOCIATION: ( BtuB and Ton ) SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
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product: 742848
reversible: false
type: Reaction
kinetic law: 742872

932257
units: 716537
value: 0.0
type: LocalParameter

885220
value: -0.001003
type: LocalParameter

760215
stoichiometry: 1.0
species: 259761
type: SpeciesReference

994390
units: 716537
value: -999999.0
type: LocalParameter

829855
units: 716537
value: 0.0
type: LocalParameter

890761
stoichiometry: 1.0
species: 237404
type: SpeciesReference

818241
units: 716537
value: 0.0
type: LocalParameter

868191
stoichiometry: 1.0
species: 250062
type: SpeciesReference

280820
notes: GENE_ASSOCIATION: b2838 PROTEIN_ASSOCIATION: LysA SUBSYSTEM: S_Threonine_and_Lysine_Metabolism PROTEIN_CLASS: 4.1.1.20
type: Reaction
product: 783360
name: R_diaminopimelate_decarboxylase
reversible: false
reactant: 783323
product: 783347
fast: false
kinetic law: 783372
reactant: 783335

307197
product: 954280
reactant: 954241
fast: false
notes: GENE_ASSOCIATION: b3821 PROTEIN_ASSOCIATION: PldA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.32
product: 954267
reactant: 954254
name: R_Phospholipase_A1__phosphatidylethanolamine__n_C160___periplasm_
product: 954293
type: Reaction
kinetic law: 954306
reversible: false

237984
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_5_Amino_6__5__phosphoribitylamino_uracil_C9H15N4O9P
type: Species

785951
stoichiometry: 1.0
species: 239803
type: SpeciesReference

911737
stoichiometry: 1.0
species: 254602
type: SpeciesReference

874047
stoichiometry: 1.0
species: 250942
type: SpeciesReference

789642
units: 716537
value: 999999.0
type: LocalParameter

767512
stoichiometry: 1.0
species: 236134
type: SpeciesReference

302457
product: 917263
kinetic law: 917288
type: Reaction
reversible: false
reactant: 917239
reactant: 917251
name: R_mannose_6_phosphate_phosphatase
fast: false
notes: GENE_ASSOCIATION: b0822 PROTEIN_ASSOCIATION: YbiV SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
product: 917275

913342
value: 0.0
type: LocalParameter

884629
units: 716537
value: 999999.0
type: LocalParameter

833920
value: -0.004012
type: LocalParameter

789858
units: 716537
value: 0.0
type: LocalParameter

933078
stoichiometry: 1.0
species: 251222
type: SpeciesReference

775663
value: 0.0
type: LocalParameter

728332
units: 716537
value: 0.151333
type: LocalParameter

237983
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_5_Amino_4_oxopentanoate_C5H9NO3
type: Species

990292
units: 716537
value: 999999.0
type: LocalParameter

772996
value: -0.023071
type: LocalParameter

302458
fast: false
type: Reaction
product: 917385
kinetic law: 917409
notes: GENE_ASSOCIATION: ( b3599 and b2415 and b2416 ) PROTEIN_ASSOCIATION: ( MtlA and PtsH and PtsI ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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reactant: 917361
name: R_mannitol_transport_via_PEPPyr_PTS__periplasm_
reversible: false
reactant: 917373

894647
stoichiometry: 1.0
species: 243443
type: SpeciesReference

752663
units: 716537
value: 0.0
type: LocalParameter

759264
stoichiometry: 1.0
species: 251342
type: SpeciesReference

913559
value: 0.0
type: LocalParameter

721587
stoichiometry: 1.0
species: 235054
type: SpeciesReference

834004
units: 716537
value: 0.0
type: LocalParameter

861361
units: 716537
value: -999999.0
type: LocalParameter

949777
stoichiometry: 1.0
species: 258182
type: SpeciesReference

881947
stoichiometry: 1.0
species: 259721
type: SpeciesReference

919332
stoichiometry: 1.0
species: 254702
type: SpeciesReference

851830
stoichiometry: 1.0
species: 259761
type: SpeciesReference

962930
stoichiometry: 2.0
species: 251342
type: SpeciesReference

234394
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_2_3_diaminopropionate_C3H9N2O2
type: Species

914427
stoichiometry: 1.0
species: 240263
type: SpeciesReference

955330
stoichiometry: 1.0
species: 235194
type: SpeciesReference

819825
stoichiometry: 1.0
species: 268281
type: SpeciesReference

902296
value: -0.00652
type: LocalParameter

737576
value: 0.0
type: LocalParameter

936720
stoichiometry: 1.0
species: 240023
type: SpeciesReference

763602
stoichiometry: 1.0
species: 246103
type: SpeciesReference

798398
stoichiometry: 1.0
species: 256002
type: SpeciesReference

784709
value: 0.0
type: LocalParameter

273060
notes: GENE_ASSOCIATION: ( b2662 or b1302 ) PROTEIN_ASSOCIATION: ( GabT ) or ( PuuE ) SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 2.6.1.19
reactant: 733342
product: 733378
reversible: false
reactant: 733354
name: R_4_aminobutyrate_transaminase
fast: false
type: Reaction
kinetic law: 733390
product: 733366

852471
stoichiometry: 1.0
species: 239803
type: SpeciesReference

978587
units: 716537
value: 0.0
type: LocalParameter

930053
units: 716537
value: 999999.0
type: LocalParameter

900703
value: -1.322057
type: LocalParameter

309717
reversible: false
product: 970217
reactant: 970169
kinetic law: 970229
reactant: 970193
fast: false
product: 970205
reactant: 970181
notes: GENE_ASSOCIATION: ( b1854 or b1676 ) PROTEIN_ASSOCIATION: ( Pyka ) or ( Pykf ) SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 2.7.1.40
name: R_pyruvate_kinase
type: Reaction

984157
stoichiometry: 1.0
species: 251342
type: SpeciesReference

806033
value: 0.0
type: LocalParameter

957601
stoichiometry: 1.0
species: 245003
type: SpeciesReference

988326
stoichiometry: 1.0
species: 246543
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966821
units: 716537
value: 999999.0
type: LocalParameter

312597
kinetic law: 987916
product: 987904
reactant: 987891
notes: GENE_ASSOCIATION: ( b1377 or b2215 or b0241 or b0929 ) PROTEIN_ASSOCIATION: ( OmpN ) or ( OmpC ) or ( PhoE ) or ( OmpF ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_thymine_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

260561
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_sulfur_dioxide_O2S
type: Species

885439
units: 716537
value: 0.0
type: LocalParameter

816982
units: 716537
value: 0.0
type: LocalParameter

956719
units: 716537
value: 999999.0
type: LocalParameter

797841
value: 0.0
type: LocalParameter

924870
units: 716537
value: -999999.0
type: LocalParameter

966275
stoichiometry: 1.0
species: 259581
type: SpeciesReference

945386
units: 716537
value: 999999.0
type: LocalParameter

876347
units: 716537
value: 0.0
type: LocalParameter

854643
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species: 255962
type: SpeciesReference

980581
stoichiometry: 1.0
species: 251202
type: SpeciesReference

971965
units: 716537
value: 999999.0
type: LocalParameter

935966
units: 716537
value: 999999.0
type: LocalParameter

895443
stoichiometry: 1.0
species: 251262
type: SpeciesReference

987371
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value: 0.0
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865887
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species: 251342
type: SpeciesReference

291159
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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name: R_Fe_III_hydroxamate_unloaded_secretion__extracellular_
type: Reaction
reactant: 841869
kinetic law: 841905
reversible: false
fast: false
product: 841881
reactant: 841857

807893
value: -0.166009
type: LocalParameter

748916
units: 716537
value: 0.0
type: LocalParameter

803701
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type: LocalParameter

728932
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type: LocalParameter

903046
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species: 258902
type: SpeciesReference

277180
notes: GENE_ASSOCIATION: ( b1767 or b0828 ) PROTEIN_ASSOCIATION: ( AnsA ) or ( YbiK ) SUBSYSTEM: S_Alanine_and_Aspartate_Metabolism PROTEIN_CLASS: 3.5.1.1
reactant: 758481
kinetic law: 758529
product: 758505
type: Reaction
product: 758517
fast: false
reactant: 758493
reversible: false
name: R_L_asparaginase

800284
value: 0.0
type: LocalParameter

821897
units: 716537
value: 999999.0
type: LocalParameter

789447
stoichiometry: 1.0
species: 245423
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852071
stoichiometry: 1.0
species: 250302
type: SpeciesReference

727302
stoichiometry: 1.0
species: 236774
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894079
stoichiometry: 1.0
species: 258902
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956102
stoichiometry: 1.0
species: 251262
type: SpeciesReference

003361
units: 716537
value: -999999.0
type: LocalParameter

764794
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type: LocalParameter

761014
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species: 241843
type: SpeciesReference

847130
stoichiometry: 1.0
species: 247923
type: SpeciesReference

976247
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species: 251222
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891787
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species: 251382
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747986
stoichiometry: 1.0
species: 240363
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934445
units: 716537
value: 0.0
type: LocalParameter

945628
units: 716537
value: 999999.0
type: LocalParameter

771753
value: 0.0
type: LocalParameter

729708
stoichiometry: 1.0
species: 238383
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894865
units: 716537
value: 999999.0
type: LocalParameter

273280
product: 734640
reactant: 734616
reversible: false
notes: GENE_ASSOCIATION: b1463 PROTEIN_ASSOCIATION: NhoA SUBSYSTEM: S_Tyrosine__Tryptophan__and_Phenylalanine_Metabolism PROTEIN_CLASS: 2.3.1.118
name: R_acetyl_CoAanthranilate_acetyltransferase
type: Reaction
product: 734652
kinetic law: 734664
reactant: 734628
fast: false

832760
stoichiometry: 2.23E-4
species: 260001
type: SpeciesReference

940038
stoichiometry: 1.0
species: 251222
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822246
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species: 268801
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928786
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species: 251262
type: SpeciesReference

989070
units: 716537
value: -999999.0
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962711
value: 0.0
type: LocalParameter

254842
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
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type: Species

752446
stoichiometry: 1.0
species: 253962
type: SpeciesReference

785530
units: 716537
value: 0.0
type: LocalParameter

243543
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_cyclopropane_phosphatidylglycerol__dioctadec_11_12_cyclo_anoyl__n_C180_cyclo__C44H82O10P1
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979957
stoichiometry: 1.0
species: 255802
type: SpeciesReference

283939
kinetic law: 803568
product: 803556
reactant: 803544
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_1_5_Diaminopentane_exchange
type: Reaction

775445
value: 0.0
type: LocalParameter

992444
units: 716537
value: 999999.0
type: LocalParameter

308057
kinetic law: 959825
product: 959813
reactant: 959801
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
fast: false
reversible: true
name: R_propanal_transport_via_channel__periplasm_
type: Reaction

282159
kinetic law: 792815
product: 792803
reactant: 792790
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: false
name: R_Sink_needed_to_allow_oxamate_to_leave_system
type: Reaction

837827
units: 716537
value: -999999.0
type: LocalParameter

953700
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value: 0.0
type: LocalParameter

854848
stoichiometry: 1.0
species: 248882
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793458
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value: 999999.0
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846901
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species: 247043
type: SpeciesReference

994172
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value: 999999.0
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776609
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897775
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value: 999999.0
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911954
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species: 251162
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881728
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species: 251342
type: SpeciesReference

811188
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285979
kinetic law: 813450
product: 813438
reactant: 813426
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_D_fructose_6_phosphate_exchange
type: Reaction

864021
units: 716537
value: 0.0
type: LocalParameter

967219
units: 716537
value: 999999.0
type: LocalParameter

302678
kinetic law: 920092
product: 920080
reactant: 920068
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_nitrious_oxide_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

819608
value: 0.0
type: LocalParameter

784167
units: 716537
value: 0.0
type: LocalParameter

759806
units: 716537
value: 0.0
type: LocalParameter

717863
units: 716537
value: 999999.0
type: LocalParameter

902078
stoichiometry: 1.0
species: 251342
type: SpeciesReference

981141
stoichiometry: 1.0
species: 260821
type: SpeciesReference

955788
units: 716537
value: 999999.0
type: LocalParameter

920530
units: 716537
value: 999999.0
type: LocalParameter

302677
fast: false
kinetic law: 919996
product: 919960
type: Reaction
reversible: false
reactant: 919923
product: 919972
name: R_N_methyltryptophan_oxidase
reactant: 919948
product: 919984
notes: GENE_ASSOCIATION: b1059 PROTEIN_ASSOCIATION: SolA SUBSYSTEM: S_Glycine_and_Serine_Metabolism PROTEIN_CLASS: 1.5.3.2
reactant: 919936

281639
product: 789606
product: 789594
type: Reaction
notes: GENE_ASSOCIATION: b0414 PROTEIN_ASSOCIATION: RibDec SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 3.5.4.26
reversible: false
reactant: 789557
kinetic law: 789618
reactant: 789570
reactant: 789582
name: R_diaminohydroxyphosphoribosylaminopryrimidine_deaminase__25drapp_
fast: false

737359
value: 0.0
type: LocalParameter

834222
stoichiometry: 1.0
species: 238303
type: SpeciesReference

904970
units: 716537
value: 4.93E-4
type: LocalParameter

753945
units: 716537
value: -999999.0
type: LocalParameter

768088
units: 716537
value: 0.0
type: LocalParameter

942901
stoichiometry: 1.0
species: 262121
type: SpeciesReference

977332
units: 716537
value: 999999.0
type: LocalParameter

903263
stoichiometry: 1.0
species: 251382
type: SpeciesReference

816765
units: 716537
value: 999999.0
type: LocalParameter

289459
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product: 830280
reactant: 830268
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_tungstate_exchange
type: Reaction

988109
stoichiometry: 1.0
species: 251222
type: SpeciesReference

732231
stoichiometry: 1.0
species: 259141
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744088
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species: 251222
type: SpeciesReference

927989
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species: 255502
type: SpeciesReference

263801
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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species: 250942
type: SpeciesReference

255002
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
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units: 716537
value: 999999.0
type: LocalParameter

817090
value: 0.0
type: LocalParameter

830534
units: 716537
value: 0.0
type: LocalParameter

786207
units: 716537
value: -999999.0
type: LocalParameter

717656
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species: 241883
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819427
stoichiometry: 1.0
species: 251302
type: SpeciesReference

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type: LocalParameter

986204
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type: LocalParameter

914728
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963230
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species: 237964
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value: 999999.0
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987155
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species: 241883
type: SpeciesReference

003144
stoichiometry: 1.0
species: 264501
type: SpeciesReference

855150
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797625
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species: 255982
type: SpeciesReference

921483
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755730
units: 716537
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type: LocalParameter

970001
units: 716537
value: 999999.0
type: LocalParameter

870630
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823302
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species: 254662
type: SpeciesReference

268101
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
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880001
units: 716537
value: 0.0
type: LocalParameter

259581
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_O_Phospho_L_serine_C3H6NO6P
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763819
units: 716537
value: 999999.0
type: LocalParameter

735064
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species: 239803
type: SpeciesReference

854429
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value: -999999.0
type: LocalParameter

963459
units: 716537
value: 0.0
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867466
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species: 256002
type: SpeciesReference

970217
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species: 259721
type: SpeciesReference

906617
units: 716537
value: 0.0
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975636
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species: 249262
type: SpeciesReference

783636
units: 716537
value: 0.0
type: LocalParameter

899145
stoichiometry: 1.0
species: 234774
type: SpeciesReference

720692
units: 716537
value: 0.0
type: LocalParameter

936949
stoichiometry: 0.5
species: 256562
type: SpeciesReference

270181
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_UDPgalactose_C15H22N2O17P2
type: Species

243123
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_cardiolipin__tetratetradec_7_enoyl__n_C141__C65H116O17P2
type: Species

771303
units: 716537
value: 999999.0
type: LocalParameter

751072
value: 0.0
type: LocalParameter

982515
units: 716537
value: 0.0
type: LocalParameter

900290
units: 716537
value: 0.0
type: LocalParameter

732968
units: 716537
value: 0.0
type: LocalParameter

874470
stoichiometry: 1.0
species: 251342
type: SpeciesReference

264361
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Xanthine_C5H4N4O2
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288219
kinetic law: 824296
product: 824284
reactant: 824272
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Nitrous_oxide_exchange
type: Reaction

869780
units: 716537
value: 0.0
type: LocalParameter

738302
stoichiometry: 1.0
species: 245023
type: SpeciesReference

802328
stoichiometry: 1.0
species: 247663
type: SpeciesReference

294318
type: Reaction
kinetic law: 864688
reactant: 864627
reactant: 864615
notes: GENE_ASSOCIATION: b2400 PROTEIN_ASSOCIATION: GltX SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 6.1.1.17
product: 864676
name: R_Glutamyl_tRNA_synthetase
product: 864651
reactant: 864639
product: 864663
fast: false
reversible: false

286719
kinetic law: 817030
product: 817018
reactant: 817006
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_GDP_exchange
type: Reaction

900896
stoichiometry: 1.0
species: 262741
type: SpeciesReference

002662
stoichiometry: 1.0
species: 264381
type: SpeciesReference

844380
value: 0.0
type: LocalParameter

853474
stoichiometry: 1.0
species: 249922
type: SpeciesReference

960465
value: 0.0
type: LocalParameter

725844
stoichiometry: 1.0
species: 236514
type: SpeciesReference

886335
value: 0.0
type: LocalParameter

928353
units: 716537
value: 0.0
type: LocalParameter

994800
value: 0.0
type: LocalParameter

807263
units: 716537
value: 0.0
type: LocalParameter

979534
units: 716537
value: 0.0
type: LocalParameter

933210
stoichiometry: 1.0
species: 251222
type: SpeciesReference

735487
stoichiometry: 1.0
species: 239023
type: SpeciesReference

276060
notes: GENE_ASSOCIATION: ( b0657 and b1677 ) PROTEIN_ASSOCIATION: ( Lnt and Lpp ) SUBSYSTEM: S_Unassigned PROTEIN_CLASS:
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fast: false
reactant: 751461
reactant: 751473
kinetic law: 751509
type: Reaction
reversible: false
product: 751485
product: 751497

248283
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_L_Fucose_C6H12O5
type: Species

996938
stoichiometry: 1.0
species: 263781
type: SpeciesReference

860118
value: 0.0
type: LocalParameter

726368
stoichiometry: 1.0
species: 250802
type: SpeciesReference

758420
units: 716537
value: -999999.0
type: LocalParameter

859308
value: 0.0
type: LocalParameter

891110
value: 0.0
type: LocalParameter

721709
units: 716537
value: 0.0
type: LocalParameter

984865
stoichiometry: 1.0
species: 241883
type: SpeciesReference

924651
units: 716537
value: 0.0
type: LocalParameter

863514
value: 0.0
type: LocalParameter

792075
stoichiometry: 1.0
species: 235634
type: SpeciesReference

752215
stoichiometry: 1.0
species: 251222
type: SpeciesReference

312377
reversible: false
notes: GENE_ASSOCIATION: b3616 PROTEIN_ASSOCIATION: Tdh SUBSYSTEM: S_Glycine_and_Serine_Metabolism PROTEIN_CLASS: 1.1.1.103
reactant: 986553
type: Reaction
fast: false
name: R_L_threonine_dehydrogenase
reactant: 986565
product: 986589
product: 986601
product: 986577
kinetic law: 986613

275520
kinetic law: 748108
product: 748096
reactant: 748084
notes: GENE_ASSOCIATION: b1325 PROTEIN_ASSOCIATION: YcjG SUBSYSTEM: S_Murein_Recycling PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_alanyl_gamma_glutamate_epimerase
type: Reaction

802111
stoichiometry: 1.0
species: 246723
type: SpeciesReference

898571
units: 716537
value: 999999.0
type: LocalParameter

844156
stoichiometry: 2.0
species: 251342
type: SpeciesReference

792778
value: 0.0
type: LocalParameter

260781
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Sucrose_6_phosphate_C12H21O14P
type: Species

981961
stoichiometry: 1.0
species: 239803
type: SpeciesReference

818464
stoichiometry: 1.0
species: 250482
type: SpeciesReference

274440
reactant: 741468
notes: GENE_ASSOCIATION: b0474 PROTEIN_ASSOCIATION: Adk SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS:
reactant: 741456
name: R_adentylate_kinase__ITP_
reversible: true
product: 741492
product: 741480
type: Reaction
kinetic law: 741504
fast: false

736874
units: 716537
value: 999999.0
type: LocalParameter

800562
units: 716537
value: -999999.0
type: LocalParameter

269081
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_magnesium_Mg
type: Species

924422
stoichiometry: 1.0
species: 255962
type: SpeciesReference

980739
stoichiometry: 1.0
species: 260841
type: SpeciesReference

837138
value: 0.0
type: LocalParameter

293358
product: 858154
product: 858166
fast: false
reactant: 858142
kinetic law: 858190
name: R_GDP_diphosphokinase
type: Reaction
reversible: false
product: 858178
notes: GENE_ASSOCIATION: ( b2784 or b3650 ) PROTEIN_ASSOCIATION: ( RelA ) or ( SpoT ) SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
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716648
value: 0.0
type: LocalParameter

946899
stoichiometry: 1.0
species: 251342
type: SpeciesReference

912182
units: 716537
value: 0.113724
type: LocalParameter

885864
stoichiometry: 1.0
species: 246663
type: SpeciesReference

988750
stoichiometry: 1.0
species: 251342
type: SpeciesReference

289039
kinetic law: 828263
product: 828251
reactant: 828239
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Sulfite_exchange
type: Reaction

958380
stoichiometry: 1.0
species: 258342
type: SpeciesReference

935132
stoichiometry: 1.0
species: 263601
type: SpeciesReference

290979
product: 840681
reactant: 840633
notes: GENE_ASSOCIATION: ( b4290 and b4289 and b4288 and b4287 ) PROTEIN_ASSOCIATION: ( FecB and FecC and FecD and FecE ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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product: 840669
reactant: 840621
type: Reaction
kinetic law: 840717
product: 840705
product: 840693
name: R_iron_transport_from_ferric_dicitrate_via_ABC_system__periplasm_
fast: false
product: 840657
reversible: false

961103
value: 0.0
type: LocalParameter

955162
value: 0.0
type: LocalParameter

946184
value: 0.0
type: LocalParameter

255422
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
type: Species

742241
units: 716537
value: -999999.0
type: LocalParameter

722966
units: 716537
value: 0.0
type: LocalParameter

772123
units: 716537
value: 0.0
type: LocalParameter

889773
stoichiometry: 1.0
species: 251342
type: SpeciesReference

981561
units: 716537
value: 0.0
type: LocalParameter

888530
stoichiometry: 1.0
species: 251342
type: SpeciesReference

886818
value: 0.0
type: LocalParameter

251442
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Homocysteine_C4H9NO2S
type: Species

233874
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_1_Acyl_sn_glycero_3_phosphoglycerol__n_C180__C24H48O9P1
type: Species

791254
units: 716537
value: 0.0
type: LocalParameter

762437
stoichiometry: 1.0
species: 259282
type: SpeciesReference

812457
stoichiometry: 1.0
species: 245863
type: SpeciesReference

733916
value: 0.0
type: LocalParameter

909364
units: 716537
value: 999999.0
type: LocalParameter

276760
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fast: false
type: Reaction
product: 755888
name: R_aerobactin_secretion__to_extracellular_
reactant: 755876
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
kinetic law: 755912
product: 755900
reversible: false

876797
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species: 237304
type: SpeciesReference

746866
stoichiometry: 1.0
species: 261561
type: SpeciesReference

790401
units: 716537
value: 999999.0
type: LocalParameter

720065
value: 0.0
type: LocalParameter

918833
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species: 251342
type: SpeciesReference

264141
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Urea_CH4N2O
type: Species

747380
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species: 240103
type: SpeciesReference

728115
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species: 238303
type: SpeciesReference

873097
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species: 251342
type: SpeciesReference

979111
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value: 0.0
type: LocalParameter

848062
value: 0.0
type: LocalParameter

294178
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product: 863732
kinetic law: 863756
product: 863720
product: 863708
reactant: 863684
reversible: true
notes: GENE_ASSOCIATION: b1761 PROTEIN_ASSOCIATION: GdhA SUBSYSTEM: S_Glutamate_Metabolism PROTEIN_CLASS: 1.4.1.4
reactant: 863696
product: 863744
type: Reaction
reactant: 863672
name: R_glutamate_dehydrogenase__NADP_

743845
stoichiometry: 1.0
species: 251222
type: SpeciesReference

270180
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_UDPglucose_C15H22N2O17P2
type: Species

757056
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type: LocalParameter

838382
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value: 999999.0
type: LocalParameter

882468
value: 0.0
type: LocalParameter

890182
stoichiometry: 1.0
species: 238823
type: SpeciesReference

875112
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value: 999999.0
type: LocalParameter

981357
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species: 260881
type: SpeciesReference

233514
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
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812895
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value: 999999.0
type: LocalParameter

864493
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species: 256002
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839329
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value: 0.0
type: LocalParameter

936503
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value: 999999.0
type: LocalParameter

859536
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type: LocalParameter

891340
value: 0.0
type: LocalParameter

268961
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
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923490
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species: 241883
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876931
stoichiometry: 1.0
species: 237324
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737818
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species: 242003
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983904
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type: LocalParameter

725639
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value: 999999.0
type: LocalParameter

889760
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species: 238603
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896386
stoichiometry: 1.0
species: 248442
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965187
stoichiometry: 1.0
species: 260441
type: SpeciesReference

952482
value: 0.0
type: LocalParameter

829169
value: 0.0
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864639
stoichiometry: 1.0
species: 262341
type: SpeciesReference

779430
stoichiometry: 1.0
species: 241883
type: SpeciesReference

869575
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type: LocalParameter

738745
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value: 999999.0
type: LocalParameter

717427
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type: LocalParameter

929315
units: 716537
value: 0.0
type: LocalParameter

992880
units: 716537
value: -999999.0
type: LocalParameter

877451
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species: 256962
type: SpeciesReference

950862
stoichiometry: 1.0
species: 250302
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731590
stoichiometry: 1.0
species: 238303
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746155
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value: 999999.0
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927106
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species: 256302
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740159
stoichiometry: 1.0
species: 238663
type: SpeciesReference

255862
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
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type: Species

242163
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_butanesulfonate_C4H9O3S
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984637
stoichiometry: 1.0
species: 251342
type: SpeciesReference

313536
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notes: GENE_ASSOCIATION: b2255 PROTEIN_ASSOCIATION: ArnA SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
kinetic law: 996854
product: 996841
type: Reaction
reversible: false
reactant: 996805
fast: false
product: 996829
reactant: 996792
product: 996817

263181
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
type: Species

716660
units: 716537
value: 0.0
type: LocalParameter

859320
stoichiometry: 1.0
species: 260321
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733603
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989204
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value: 0.0
type: LocalParameter

842280
stoichiometry: 1.0
species: 247463
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961998
stoichiometry: 1.0
species: 256562
type: SpeciesReference

280839
kinetic law: 783468
product: 783456
reactant: 783444
notes: GENE_ASSOCIATION: b3809 PROTEIN_ASSOCIATION: DapF SUBSYSTEM: S_Threonine_and_Lysine_Metabolism PROTEIN_CLASS: 5.1.1.7
fast: false
reversible: true
name: R_diaminopimelate_epimerase
type: Reaction

954680
stoichiometry: 1.0
species: 251382
type: SpeciesReference

285339
kinetic law: 810356
product: 810344
reactant: 810332
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_L_Carnitine_exchange
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747548
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986902
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species: 258822
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816123
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749820
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831114
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741094
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775216
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type: LocalParameter

275500
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product: 747998
reactant: 747986
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_D_alanyl_D_alanine__DalaDala__transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

977875
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species: 251222
type: SpeciesReference

737371
units: 716537
value: 0.0
type: LocalParameter

304397
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product: 935457
reactant: 935445
notes: GENE_ASSOCIATION: s0001 PROTEIN_ASSOCIATION: SPONTANEOUS SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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reversible: true
name: R_o2_transport_via_diffusion__periplasm_
type: Reaction

904202
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741745
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value: 0.0
type: LocalParameter

246783
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Ethanolamine_C2H8NO
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value: 999999.0
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743616
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species: 251342
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782393
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species: 251342
type: SpeciesReference

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product: 811308
reactant: 811296
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_dAMP_exchange
type: Reaction

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species: 247743
type: SpeciesReference

960778
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species: 249262
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789654
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921049
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916082
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940764
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species: 258642
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753123
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794108
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802340
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854860
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270161
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boundary condition: true
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initial concentration: NaN
initial amount: NaN
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type: LocalParameter

739192
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895010
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type: LocalParameter

259142
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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802739
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value: 999999.0
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932814
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species: 241883
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species: 241563
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752651
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737589
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value: 0.0
type: LocalParameter

259141
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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type: Species

721575
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species: 235074
type: SpeciesReference

297818
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kinetic law: 886299
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notes: GENE_ASSOCIATION: b0026 PROTEIN_ASSOCIATION: IleS SUBSYSTEM: S_tRNA_Charging PROTEIN_CLASS: 6.1.1.5
product: 886263
reactant: 886227
product: 886287
reactant: 886251
type: Reaction
reactant: 886239
reversible: false

915659
units: 716537
value: 999999.0
type: LocalParameter

256522
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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type: Species

306597
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fast: false
notes: GENE_ASSOCIATION: ( b0418 or b1278 ) PROTEIN_ASSOCIATION: ( PgpA ) or ( PgpB ) SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.3.27
reactant: 950364
type: Reaction
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kinetic law: 950414
product: 950402
product: 950390
reactant: 950377

919320
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species: 251222
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881935
stoichiometry: 1.0
species: 238743
type: SpeciesReference

295298
notes: GENE_ASSOCIATION: b3449 PROTEIN_ASSOCIATION: UgpQ SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.4.46
product: 870812
product: 870824
reactant: 870800
kinetic law: 870848
type: Reaction
name: R_Glycerophosphodiester_phosphodiesterase__Glycerophosphocholine_
fast: false
product: 870836
reactant: 870788
reversible: false

922824
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species: 255862
type: SpeciesReference

748314
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species: 259721
type: SpeciesReference

866901
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species: 250362
type: SpeciesReference

267721
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Glucose_C6H12O6
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751289
units: 716537
value: 999999.0
type: LocalParameter

955342
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species: 251382
type: SpeciesReference

740378
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value: 0.0
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942208
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852483
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species: 248443
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957613
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species: 251382
type: SpeciesReference

930041
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818253
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829843
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type: LocalParameter

761027
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species: 259141
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849441
stoichiometry: 1.0
species: 251222
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760227
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species: 251342
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species: 251222
type: SpeciesReference

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874035
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731384
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value: -999999.0
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913354
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value: 0.0
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767524
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species: 239803
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stoichiometry: 1.0
species: 254622
type: SpeciesReference

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882480
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775675
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812689
units: 716537
value: 0.0
type: LocalParameter

294898
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product: 868289
reactant: 868277
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_glycerol_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

728320
value: 0.0
type: LocalParameter

833932
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species: 251222
type: SpeciesReference

289899
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type: Reaction
product: 833220
reactant: 833196
product: 833232
reactant: 833208
reversible: false
name: R_D_fructose_6_phosphate_phosphatase
notes: GENE_ASSOCIATION: b0822 PROTEIN_ASSOCIATION: YbiV SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
kinetic law: 833244

950621
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species: 258602
type: SpeciesReference

807408
value: -0.045139
type: LocalParameter

772984
units: 716537
value: 0.0
type: LocalParameter

894659
stoichiometry: 1.0
species: 251362
type: SpeciesReference

004739
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type: LocalParameter

990280
units: 716537
value: 0.0
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768210
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type: SpeciesReference

728944
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species: 251342
type: SpeciesReference

967651
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934193
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type: LocalParameter

865875
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species: 250202
type: SpeciesReference

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type: LocalParameter

860130
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value: 0.0
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803713
units: 716537
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721721
units: 716537
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type: LocalParameter

807881
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value: 0.0
type: LocalParameter

307397
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reactant: 955583
product: 955595
kinetic law: 955631
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notes: GENE_ASSOCIATION: b3821 PROTEIN_ASSOCIATION: PldA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.32
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name: R_Phospholipase_A1__phosphatidylglycerol__n_C181___periplasm_
reversible: false
fast: false

738519
units: 716537
value: 0.0
type: LocalParameter

852083
stoichiometry: 1.0
species: 235634
type: SpeciesReference

747974
value: 0.0
type: LocalParameter

239323
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
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903034
stoichiometry: 1.0
species: 253642
type: SpeciesReference

302697
kinetic law: 920188
product: 920176
reactant: 920164
notes: GENE_ASSOCIATION: s0001 PROTEIN_ASSOCIATION: SPONTANEOUS SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
fast: false
reversible: true
name: R_nitrious_oxide_transport__diffusion_
type: Reaction

800296
stoichiometry: 1.0
species: 236654
type: SpeciesReference

976259
stoichiometry: 1.0
species: 260521
type: SpeciesReference

279940
type: Reaction
product: 776000
reactant: 775976
notes: GENE_ASSOCIATION: b0336 PROTEIN_ASSOCIATION: CodB SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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product: 776012
name: R_cytosine_transport_in_via_proton_symport__periplasm_
fast: false
kinetic law: 776024
reversible: false

847142
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species: 251342
type: SpeciesReference

934457
units: 716537
value: 999999.0
type: LocalParameter

254482
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_2_alpha_D_Mannosyl__D_glycerate_C9H15O9
type: Species

313537
kinetic law: 996950
product: 996938
reactant: 996926
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_UDP_D_glucuronate_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

843661
value: 0.0
type: LocalParameter

302698
reactant: 920274
notes: GENE_ASSOCIATION: b3957 PROTEIN_ASSOCIATION: ArgE SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS:
kinetic law: 920310
fast: false
name: R_N_acetylornithine_deacetylase
reactant: 920262
type: Reaction
product: 920298
reversible: false
product: 920286

757395
stoichiometry: 1.0
species: 259141
type: SpeciesReference

988314
value: 0.0
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841808
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value: 999999.0
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966833
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984169
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species: 258902
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891774
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species: 252882
type: SpeciesReference

806021
units: 716537
value: 999999.0
type: LocalParameter

890399
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species: 237304
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943096
value: 0.0
type: LocalParameter

282599
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product: 795400
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notes: GENE_ASSOCIATION: b0411 PROTEIN_ASSOCIATION: Tsx SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
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reversible: true
name: R_deoxyuridine_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

244363
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Cytidine_C9H13N3O5
type: Species

816970
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type: LocalParameter

907860
value: 0.0
type: LocalParameter

876359
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type: LocalParameter

243983
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Cu2_Cu
type: Species

886191
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type: LocalParameter

844368
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value: 999999.0
type: LocalParameter

900001
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species: 258122
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286099
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Fe_III_hydroxamate_exchange
type: Reaction

283919
kinetic law: 803472
product: 803460
reactant: 803448
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_1_4_alpha_D_glucan_exchange
type: Reaction

945398
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770724
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species: 250442
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895455
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species: 250342
type: SpeciesReference

249702
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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name: M_D_Glucuronate_1_phosphate_C6H8O10P
type: Species

803991
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type: LocalParameter

987383
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value: 999999.0
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species: 256602
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971977
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239963
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initial concentration: NaN
initial amount: NaN
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967207
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881716
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885208
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value: 0.0
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252182
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925608
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949548
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759818
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920542
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811790
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species: 266621
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896809
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842705
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value: 999999.0
type: LocalParameter

258702
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initial concentration: NaN
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834210
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species: 251622
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813847
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249562
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832772
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species: 260321
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295558
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notes: GENE_ASSOCIATION: b2964 PROTEIN_ASSOCIATION: NupG SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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894877
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822234
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species: 270021
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775457
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752434
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731166
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989083
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295078
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name: R_GDP_D_mannose_dehydratase
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992432
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872304
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value: 999999.0
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897763
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994184
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846913
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950402
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notes: GENE_ASSOCIATION: b1297 PROTEIN_ASSOCIATION: YcjK SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
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kinetic law: 859248
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product: 859200
product: 859212
reversible: false
reactant: 859188
name: R_gamma_glutamyl_putrescine_synthase
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product: 859224
reactant: 859164
type: Reaction

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type: LocalParameter

290619
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product: 838226
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notes: GENE_ASSOCIATION: ( b2097 or b1773 or b2925 ) PROTEIN_ASSOCIATION: ( FbaB ) or ( B1773 ) or ( FbaA ) SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 4.1.2.13
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name: R_fructose_bisphosphate_aldolase
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987167
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003132
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species: 251342
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264681
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name: M_L_Xylulose_C5H10O5
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species: 253462
type: SpeciesReference

970013
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755742
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823314
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species: 269021
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304117
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product: 933114
fast: false
notes: GENE_ASSOCIATION: b2781 PROTEIN_ASSOCIATION: MazG SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS:
reactant: 933078
product: 933126
reversible: false
name: R_Nucleoside_triphosphate_pyrophosphorylase__utp_
kinetic law: 933138
type: Reaction

921495
units: 716537
value: 999999.0
type: LocalParameter

797613
stoichiometry: 1.0
species: 261161
type: SpeciesReference

793711
value: 0.0
type: LocalParameter

880013
value: 0.0
type: LocalParameter

891558
stoichiometry: 1.0
species: 252882
type: SpeciesReference

947830
units: 716537
value: 0.0
type: LocalParameter

313756
product: 999567
fast: false
notes: GENE_ASSOCIATION: b3997 PROTEIN_ASSOCIATION: HemE SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 4.1.1.37
reactant: 999543
type: Reaction
reactant: 999555
name: R_uroporphyrinogen_decarboxylase__uroporphyrinogen_III_
product: 999579
reversible: false
kinetic law: 999591

735052
stoichiometry: 1.0
species: 259022
type: SpeciesReference

903251
stoichiometry: 1.0
species: 253642
type: SpeciesReference

816753
units: 716537
value: 0.0
type: LocalParameter

302478
kinetic law: 917615
product: 917603
product: 917591
reactant: 917579
notes: GENE_ASSOCIATION: b4322 PROTEIN_ASSOCIATION: UxuAec SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 4.2.1.8
fast: false
reversible: false
name: R_D_mannonate_hydrolyase
type: Reaction

977344
value: 0.0
type: LocalParameter

279720
kinetic law: 774589
product: 774577
product: 774565
reactant: 774553
notes: GENE_ASSOCIATION: b0036 PROTEIN_ASSOCIATION: CaiD SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS:
fast: false
reversible: true
name: R_Carnityl_CoA_dehydratse
type: Reaction

720899
stoichiometry: 1.0
species: 234854
type: SpeciesReference

313757
notes: GENE_ASSOCIATION: b2498 PROTEIN_ASSOCIATION: Upp SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 2.4.2.9
product: 999700
reactant: 999663
reversible: false
type: Reaction
kinetic law: 999712
fast: false
name: R_uracil_phosphoribosyltransferase
product: 999688
reactant: 999676

307177
product: 954144
reversible: false
type: Reaction
product: 954132
reactant: 954108
reactant: 954120
notes: GENE_ASSOCIATION: b3821 PROTEIN_ASSOCIATION: PldA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.32
kinetic law: 954168
product: 954156
name: R_Phospholipase_A1__phosphatidylethanolamine__n_C141___periplasm_
fast: false

770941
stoichiometry: 1.0
species: 250442
type: SpeciesReference

780646
stoichiometry: 1.0
species: 243223
type: SpeciesReference

914403
stoichiometry: 1.0
species: 251262
type: SpeciesReference

302477
kinetic law: 917506
product: 917494
reactant: 917482
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_mannitol_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

286019
kinetic law: 813642
product: 813630
reactant: 813618
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Fe2_exchange
type: Reaction

914716
units: 716537
value: 999999.0
type: LocalParameter

819439
stoichiometry: 1.0
species: 268201
type: SpeciesReference

303497
reactant: 928293
name: R_5__nucleotidase__XMP_
notes: GENE_ASSOCIATION: ( b0480 or b4055 ) PROTEIN_ASSOCIATION: ( UshA ) or ( AphA ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.3.5
reversible: false
reactant: 928305
product: 928317
fast: false
product: 928329
type: Reaction
kinetic law: 928341

999737
units: 716537
value: 999999.0
type: LocalParameter

986216
units: 716537
value: 0.0
type: LocalParameter

717668
stoichiometry: 1.0
species: 251222
type: SpeciesReference

830522
value: 0.0
type: LocalParameter

308777
product: 964387
reversible: false
type: Reaction
notes: GENE_ASSOCIATION: ( b2677 and b2678 and b2679 ) PROTEIN_ASSOCIATION: ( ProVec and ProW and ProX ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
kinetic law: 964411
fast: false
name: R_L_proline_transport_via_ABC_system__periplasm_
product: 964363
reactant: 964339
reactant: 964351
product: 964399
reactant: 964327
product: 964375

838795
stoichiometry: 2.0
species: 251342
type: SpeciesReference

735499
stoichiometry: 1.0
species: 251262
type: SpeciesReference

807275
units: 716537
value: 999999.0
type: LocalParameter

879602
value: 0.0
type: LocalParameter

979546
value: 0.0
type: LocalParameter

265301
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Aminoacetaldehyde_C2H6NO
type: Species

725857
stoichiometry: 1.0
species: 241883
type: SpeciesReference

758432
units: 716537
value: 999999.0
type: LocalParameter

996926
stoichiometry: 1.0
species: 263761
type: SpeciesReference

272840
product: 731930
reactant: 731881
product: 731942
notes: GENE_ASSOCIATION: ( b2836 and b1094 ) PROTEIN_ASSOCIATION: ( Aas and AcpP ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 6.2.1.20
fast: false
reversible: false
type: Reaction
kinetic law: 731954
name: R_acyl_acyl_carrier_protein_synthetase___n_C161_
product: 731917
reactant: 731905
reactant: 731893

792087
stoichiometry: 1.0
species: 245823
type: SpeciesReference

863526
units: 716537
value: 0.0
type: LocalParameter

752227
stoichiometry: 1.0
species: 240223
type: SpeciesReference

834440
units: 716537
value: 0.0
type: LocalParameter

891122
stoichiometry: 1.0
species: 251222
type: SpeciesReference

984853
value: 0.0
type: LocalParameter

244903
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Deoxycytidine_C9H13N3O4
type: Species

924663
units: 716537
value: 999999.0
type: LocalParameter

794821
stoichiometry: 1.0
species: 246283
type: SpeciesReference

981973
stoichiometry: 1.0
species: 258902
type: SpeciesReference

844144
stoichiometry: 2.0
species: 247203
type: SpeciesReference

792766
units: 716537
value: 3.29E-4
type: LocalParameter

804488
units: 716537
value: 0.0
type: LocalParameter

802123
stoichiometry: 9.0
species: 251342
type: SpeciesReference

906629
value: 0.0
type: LocalParameter

867454
stoichiometry: 1.0
species: 251342
type: SpeciesReference

975624
stoichiometry: 1.0
species: 241183
type: SpeciesReference

783648
units: 716537
value: 999999.0
type: LocalParameter

971606
units: 716537
value: 0.0
type: LocalParameter

936937
stoichiometry: 1.0
species: 236074
type: SpeciesReference

285759
kinetic law: 812384
product: 812372
reactant: 812360
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Dimethyl_sulfoxide_exchange
type: Reaction

771315
value: 0.0
type: LocalParameter

982503
value: 0.0
type: LocalParameter

751060
units: 716537
value: 0.0
type: LocalParameter

874482
stoichiometry: 1.0
species: 251222
type: SpeciesReference

869792
units: 716537
value: 999999.0
type: LocalParameter

760809
value: 0.0
type: LocalParameter

847361
units: 716537
value: 0.0
type: LocalParameter

888939
units: 716537
value: 999999.0
type: LocalParameter

718297
stoichiometry: 1.0
species: 234414
type: SpeciesReference

886323
units: 716537
value: 999999.0
type: LocalParameter

239103
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_N_Acetyl_D_glucosamine_C8H15NO6
type: Species

960477
units: 716537
value: 4.24E-4
type: LocalParameter

002674
stoichiometry: 1.0
species: 264341
type: SpeciesReference

900884
stoichiometry: 1.0
species: 251342
type: SpeciesReference

853486
stoichiometry: 1.0
species: 255982
type: SpeciesReference

259362
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Prolinylglycine_C7H12N2O3
type: Species

783420
units: 716537
value: 0.252836
type: LocalParameter

733904
units: 716537
value: 999999.0
type: LocalParameter

812469
stoichiometry: 1.0
species: 266761
type: SpeciesReference

285119
kinetic law: 809282
product: 809270
reactant: 809258
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Cadmium_exchange
type: Reaction

909352
units: 716537
value: 0.0
type: LocalParameter

876785
stoichiometry: 1.0
species: 255942
type: SpeciesReference

764155
stoichiometry: 1.0
species: 251342
type: SpeciesReference

918845
stoichiometry: 1.0
species: 263421
type: SpeciesReference

913571
units: 716537
value: 0.005816
type: LocalParameter

309437
notes: GENE_ASSOCIATION: ( b1296 or b0692 ) PROTEIN_ASSOCIATION: ( PuuP ) or ( PotEec ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
kinetic law: 968489
name: R_putrescine_transport_in_via_proton_symport
product: 968477
reactant: 968453
reactant: 968441
product: 968465
reversible: false
fast: false
type: Reaction

725978
stoichiometry: 1.0
species: 237644
type: SpeciesReference

720077
stoichiometry: 1.0
species: 234874
type: SpeciesReference

845532
value: 0.0
type: LocalParameter

790413
value: 0.0
type: LocalParameter

241483
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_L_Arginine_C6H15N4O2
type: Species

848074
stoichiometry: 1.0
species: 259502
type: SpeciesReference

736079
stoichiometry: 1.0
species: 239083
type: SpeciesReference

747392
stoichiometry: 1.0
species: 251342
type: SpeciesReference

728103
stoichiometry: 1.0
species: 237364
type: SpeciesReference

960249
stoichiometry: 1.0
species: 251222
type: SpeciesReference

899158
stoichiometry: 1.0
species: 258122
type: SpeciesReference

838370
units: 716537
value: 0.0
type: LocalParameter

890170
stoichiometry: 1.0
species: 243343
type: SpeciesReference

941990
stoichiometry: 1.0
species: 251222
type: SpeciesReference

875100
units: 716537
value: -999999.0
type: LocalParameter

743833
stoichiometry: 1.0
species: 240763
type: SpeciesReference

843212
stoichiometry: 1.0
species: 251342
type: SpeciesReference

789870
units: 716537
value: 999999.0
type: LocalParameter

757044
units: 716537
value: 999999.0
type: LocalParameter

924434
stoichiometry: 2.0
species: 256362
type: SpeciesReference

761891
stoichiometry: 1.0
species: 243343
type: SpeciesReference

818476
stoichiometry: 1.0
species: 268001
type: SpeciesReference

736862
units: 716537
value: 0.0
type: LocalParameter

800574
units: 716537
value: 999999.0
type: LocalParameter

793019
stoichiometry: 1.0
species: 251222
type: SpeciesReference

912194
value: 0.0
type: LocalParameter

296218
reactant: 876383
type: Reaction
name: R_3_hydroxyacyl_CoA_dehydrogenase__acetoacetyl_CoA_
fast: false
product: 876407
kinetic law: 876432
reactant: 876371
product: 876420
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) PROTEIN_ASSOCIATION: ( FadB ) or ( FadJ ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.35
product: 876395
reversible: false

302898
fast: false
reactant: 922910
reversible: false
product: 922934
product: 922946
name: R_sodium_proton_antiporter__HNA_is_2___periplasm_
notes: GENE_ASSOCIATION: b0019 PROTEIN_ASSOCIATION: NhaA SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
reactant: 922922
kinetic law: 922958
type: Reaction

988762
stoichiometry: 1.0
species: 261981
type: SpeciesReference

257902
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_phosphatidylethanolamine__dihexadec_9enoyl__n_C161__C37H70N1O8P1
type: Species

885876
stoichiometry: 1.0
species: 251222
type: SpeciesReference

958392
stoichiometry: 1.0
species: 233894
type: SpeciesReference

886805
units: 716537
value: 999999.0
type: LocalParameter

980727
stoichiometry: 1.0
species: 255962
type: SpeciesReference

957829
stoichiometry: 1.0
species: 251262
type: SpeciesReference

831391
value: 0.0
type: LocalParameter

772135
value: -0.004012
type: LocalParameter

742253
units: 716537
value: 999999.0
type: LocalParameter

259361
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Prolinylglycine_C7H12N2O3
type: Species

955174
stoichiometry: 1.0
species: 251262
type: SpeciesReference

935120
stoichiometry: 1.0
species: 249422
type: SpeciesReference

828468
units: 716537
value: 0.0
type: LocalParameter

951249
stoichiometry: 1.0
species: 242623
type: SpeciesReference

946196
units: 716537
value: 0.0
type: LocalParameter

946887
stoichiometry: 1.0
species: 239803
type: SpeciesReference

850720
stoichiometry: 1.0
species: 255722
type: SpeciesReference

791266
value: 0.0
type: LocalParameter

302897
reversible: false
notes: GENE_ASSOCIATION: b1186 PROTEIN_ASSOCIATION: NhaB SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
kinetic law: 922836
reactant: 922800
type: Reaction
reactant: 922788
name: R_sodium_proton_antiporter__HNA_is_15___periplasm_
product: 922824
product: 922812
fast: false

237544
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
type: Species

981573
value: -0.003009
type: LocalParameter

717439
units: 716537
value: 0.0
type: LocalParameter

312177
product: 985395
notes: GENE_ASSOCIATION: ( b1602 and b1603 ) PROTEIN_ASSOCIATION: Pnt SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS: 1.6.1.1
product: 985407
name: R_NAD_P__transhydrogenase__periplasm_
product: 985383
type: Reaction
reactant: 985371
reversible: false
reactant: 985359
reactant: 985347
kinetic law: 985419
fast: false

916070
units: 716537
value: 999999.0
type: LocalParameter

993445
stoichiometry: 1.0
species: 262561
type: SpeciesReference

888975
value: 0.0
type: LocalParameter

237964
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_5_amino_1__5_phospho_D_ribosyl_imidazole_4_carboxylate_C9H11N3O9P
type: Species

294338
product: 864808
notes: GENE_ASSOCIATION: ( b0655 and b0654 and b0653 and b0652 ) PROTEIN_ASSOCIATION: ( GltI and GltJ and GltK and GltL ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
reversible: false
product: 864820
kinetic law: 864844
reactant: 864760
product: 864832
product: 864796
reactant: 864772
reactant: 864784
type: Reaction
fast: false
name: R_L_glutamate_transport_via_ABC_system__periplasm_

303038
product: 924591
reactant: 924579
kinetic law: 924639
reactant: 924554
product: 924615
reactant: 924567
name: R_Nickle__Ni2__ABC_transporter__periplasm_
product: 924627
fast: false
reversible: false
product: 924603
notes: GENE_ASSOCIATION: b3469 PROTEIN_ASSOCIATION: ZntA SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
type: Reaction

729900
units: 716537
value: 0.0
type: LocalParameter

932826
stoichiometry: 1.0
species: 251222
type: SpeciesReference

790209
units: 716537
value: 0.273872
type: LocalParameter

811766
value: -0.267822
type: LocalParameter

243103
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_cardiolipin__tetratetradecanoyl__n_C140__C65H124O17P2
type: Species

248043
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_5_Formamido_1__5_phospho_D_ribosyl_imidazole_4_carboxamide_C10H13N4O9P
type: Species

754065
stoichiometry: 1.0
species: 251342
type: SpeciesReference

939532
units: 716537
value: 0.0
type: LocalParameter

895047
units: 716537
value: 0.0
type: LocalParameter

237963
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_4__1_D_Ribitylamino__5_aminouracil_C9H16N4O6
type: Species

759697
value: 0.0
type: LocalParameter

296258
fast: false
reactant: 876639
reactant: 876651
type: Reaction
product: 876664
notes: GENE_ASSOCIATION: ( b2341 or b3846 ) PROTEIN_ASSOCIATION: ( FadJ ) or ( FadB ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.35
kinetic law: 876701
reversible: false
product: 876676
name: R_3_hydroxyacyl_CoA_dehydrogenase__3_oxooctanoyl_CoA_
product: 876688

822270
units: 716537
value: 0.0
type: LocalParameter

802352
stoichiometry: 3.0
species: 234494
type: SpeciesReference

915683
units: 716537
value: 0.0
type: LocalParameter

303037
fast: false
notes: GENE_ASSOCIATION: ( b2710 and b2711 ) PROTEIN_ASSOCIATION: ( NorV and NorW ) SUBSYSTEM: S_Nitrogen_Metabolism PROTEIN_CLASS:
reactant: 924434
reactant: 924410
product: 924446
reactant: 924422
product: 924458
type: Reaction
name: R_NADHflavorubredoxin_oxidoreductase
product: 924470
reversible: false
kinetic law: 924482

737383
value: 0.0
type: LocalParameter

717206
units: 716537
value: 0.0
type: LocalParameter

940050
stoichiometry: 1.0
species: 257422
type: SpeciesReference

977887
stoichiometry: 1.0
species: 247963
type: SpeciesReference

749856
stoichiometry: 1.0
species: 255982
type: SpeciesReference

881207
stoichiometry: 1.0
species: 251342
type: SpeciesReference

768779
stoichiometry: 1.0
species: 242883
type: SpeciesReference

985298
units: 716537
value: 999999.0
type: LocalParameter

849478
units: 716537
value: -999999.0
type: LocalParameter

920518
units: 716537
value: 0.0
type: LocalParameter

803966
units: 716537
value: 0.0
type: LocalParameter

761473
value: 0.0
type: LocalParameter

932233
units: 716537
value: 999999.0
type: LocalParameter

789666
units: 716537
value: 3.29E-4
type: LocalParameter

949572
units: 716537
value: 0.0
type: LocalParameter

776404
stoichiometry: 1.0
species: 251342
type: SpeciesReference

743604
stoichiometry: 1.0
species: 249262
type: SpeciesReference

885244
stoichiometry: 1.0
species: 251342
type: SpeciesReference

948807
units: 716537
value: 0.0
type: LocalParameter

309017
kinetic law: 965828
reactant: 965780
reversible: false
fast: false
reactant: 965792
product: 965816
notes: GENE_ASSOCIATION: b4160 PROTEIN_ASSOCIATION: Psd SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 4.1.1.65
product: 965804
type: Reaction
name: R_Phosphatidylserine_decarboxylase__n_C161_

784721
stoichiometry: 1.0
species: 244583
type: SpeciesReference

997590
value: 0.0
type: LocalParameter

951273
stoichiometry: 1.0
species: 243223
type: SpeciesReference

234834
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_2_Acyl_sn_glycero_3_phosphoethanolamine__n_C141__C19H38NO7P1
type: Species

828492
value: 0.0
type: LocalParameter

740147
value: -0.073225
type: LocalParameter

864226
stoichiometry: 1.0
species: 249942
type: SpeciesReference

004968
value: 0.0
type: LocalParameter

716672
value: 0.0
type: LocalParameter

722254
units: 716537
value: 999999.0
type: LocalParameter

747512
units: 716537
value: -999999.0
type: LocalParameter

746143
units: 716537
value: 0.0
type: LocalParameter

260541
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_N_Succinyl_2_L_amino_6_oxoheptanedioate_C11H12NO8
type: Species

867226
stoichiometry: 1.0
species: 256042
type: SpeciesReference

769298
units: 716537
value: 999999.0
type: LocalParameter

992892
units: 716537
value: 999999.0
type: LocalParameter

959089
stoichiometry: 1.0
species: 259001
type: SpeciesReference

843248
units: 716537
value: 0.0
type: LocalParameter

831126
value: -0.212653
type: LocalParameter

998517
units: 716537
value: 999999.0
type: LocalParameter

961962
value: 0.0
type: LocalParameter

293338
kinetic law: 858057
product: 858045
reactant: 858033
notes: GENE_ASSOCIATION: b2052 PROTEIN_ASSOCIATION: Fcl SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS:
fast: false
reversible: false
name: R_GDP_4_dehydro_6_deoxy_D_mannose_epimerase
type: Reaction

804693
value: -0.166009
type: LocalParameter

999761
units: 716537
value: 0.0
type: LocalParameter

947806
units: 716537
value: 999999.0
type: LocalParameter

289019
kinetic law: 828166
product: 828154
reactant: 828142
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_sulfur_dioxide_exchange
type: Reaction

763831
value: 0.0
type: LocalParameter

756862
stoichiometry: 1.0
species: 251342
type: SpeciesReference

244943
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
type: Species

960054
units: 716537
value: -999999.0
type: LocalParameter

834670
units: 716537
value: 0.0
type: LocalParameter

258182
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Phosphatidylglycerol__ditetradec_7_enoyl__n_C141__C34H62O10P1
type: Species

729514
value: 0.0
type: LocalParameter

264121
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Urea_CH4N2O
type: Species

994608
stoichiometry: 1.0
species: 263301
type: SpeciesReference

981369
stoichiometry: 3.0
species: 251342
type: SpeciesReference

812883
units: 716537
value: 0.0
type: LocalParameter

841384
units: 716537
value: 0.0
type: LocalParameter

738757
value: 0.0
type: LocalParameter

251642
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Heme_O_C49H56FeN4O5
type: Species

957854
stoichiometry: 1.0
species: 233814
type: SpeciesReference

817297
stoichiometry: 1.0
species: 249662
type: SpeciesReference

717415
units: 716537
value: 999999.0
type: LocalParameter

869587
stoichiometry: 1.0
species: 241883
type: SpeciesReference

870836
stoichiometry: 1.0
species: 251342
type: SpeciesReference

274680
product: 742971
reactant: 742946
notes: GENE_ASSOCIATION: b3397 PROTEIN_ASSOCIATION: NudE SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.6.1.13
product: 742997
type: Reaction
product: 742984
reversible: false
fast: false
kinetic law: 743010
name: R_ADPribose_diphosphatase
reactant: 742958

738543
stoichiometry: 1.0
species: 247043
type: SpeciesReference

835625
value: 0.0
type: LocalParameter

936515
value: 0.0
type: LocalParameter

925186
stoichiometry: 1.0
species: 241883
type: SpeciesReference

965199
stoichiometry: 1.0
species: 237623
type: SpeciesReference

725603
stoichiometry: 1.0
species: 255942
type: SpeciesReference

914752
value: -0.002006
type: LocalParameter

963471
units: 716537
value: 999999.0
type: LocalParameter

907872
units: 716537
value: 0.0
type: LocalParameter

819849
units: 716537
value: 0.0
type: LocalParameter

839593
stoichiometry: 1.0
species: 251222
type: SpeciesReference

302437
fast: false
reversible: false
name: R_manganese__Mn2__transport_out_via_proton_antiport__periplasm_
product: 917058
reactant: 917022
kinetic law: 917070
product: 917046
reactant: 917034
notes: GENE_ASSOCIATION: ( b3915 or b0752 ) PROTEIN_ASSOCIATION: ( FieF ) or ( ZitB ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
type: Reaction

950838
value: 0.0
type: LocalParameter

280800
kinetic law: 783131
product: 783119
reactant: 783107
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_dAMP_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

890387
value: 0.0
type: LocalParameter

891762
value: 0.0
type: LocalParameter

806057
value: -0.127391
type: LocalParameter

966845
units: 716537
value: 0.0
type: LocalParameter

933781
stoichiometry: 2.0
species: 251262
type: SpeciesReference

972519
stoichiometry: 1.0
species: 245463
type: SpeciesReference

988302
units: 716537
value: 1.023295
type: LocalParameter

302438
kinetic law: 917167
product: 917155
reactant: 917143
notes: GENE_ASSOCIATION: b3040 PROTEIN_ASSOCIATION: ZupT SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
fast: false
reversible: false
name: R_manganese_transport_in_via_permease__no_H_
type: Reaction

721563
value: 0.0
type: LocalParameter

880242
units: 716537
value: 0.0
type: LocalParameter

895467
stoichiometry: 1.0
species: 251382
type: SpeciesReference

788046
stoichiometry: 1.0
species: 255962
type: SpeciesReference

797865
stoichiometry: 1.0
species: 256002
type: SpeciesReference

966251
value: 0.0
type: LocalParameter

924894
value: 0.0
type: LocalParameter

900013
stoichiometry: 1.0
species: 241043
type: SpeciesReference

914969
units: 716537
value: 0.0
type: LocalParameter

970241
units: 716537
value: 0.0
type: LocalParameter

747962
units: 716537
value: 0.020466
type: LocalParameter

907292
value: 0.0
type: LocalParameter

771778
value: 0.0
type: LocalParameter

851251
units: 716537
value: 0.0
type: LocalParameter

792790
stoichiometry: 1.0
species: 257222
type: SpeciesReference

982310
stoichiometry: 1.0
species: 261101
type: SpeciesReference

789423
stoichiometry: 1.0
species: 242723
type: SpeciesReference

726161
units: 716537
value: 0.0
type: LocalParameter

903022
stoichiometry: 1.0
species: 251342
type: SpeciesReference

852095
stoichiometry: 1.0
species: 245263
type: SpeciesReference

803725
value: -0.166009
type: LocalParameter

243992
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Cu2_Cu
type: Species

728956
stoichiometry: 1.0
species: 253782
type: SpeciesReference

762670
stoichiometry: 1.0
species: 240203
type: SpeciesReference

843673
units: 716537
value: 0.0
type: LocalParameter

810380
units: 716537
value: 999999.0
type: LocalParameter

293918
fast: false
reversible: false
product: 861711
name: R_D_glucose_transport_via_ABC_system__periplasm_
type: Reaction
product: 861687
reactant: 861662
reactant: 861638
notes: GENE_ASSOCIATION: ( b2149 and b2150 and b2148 ) PROTEIN_ASSOCIATION: ( MglA and MglB and MglC ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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product: 861674
reactant: 861650
kinetic law: 861724

956126
stoichiometry: 1.0
species: 234014
type: SpeciesReference

847154
stoichiometry: 1.0
species: 256002
type: SpeciesReference

896109
stoichiometry: 1.0
species: 251262
type: SpeciesReference

243993
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Cu2_Cu
type: Species

886612
value: 0.0
type: LocalParameter

976223
units: 716537
value: 0.0
type: LocalParameter

913366
value: 0.0
type: LocalParameter

767536
stoichiometry: 1.0
species: 251342
type: SpeciesReference

934469
value: 0.0
type: LocalParameter

263821
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
type: Species

775036
units: 716537
value: 999999.0
type: LocalParameter

831367
units: 716537
value: 0.0
type: LocalParameter

760239
stoichiometry: 1.0
species: 252282
type: SpeciesReference

794132
stoichiometry: 1.0
species: 246023
type: SpeciesReference

829879
stoichiometry: 1.0
species: 262621
type: SpeciesReference

727119
value: 0.0
type: LocalParameter

988738
stoichiometry: 1.0
species: 235634
type: SpeciesReference

918809
stoichiometry: 1.0
species: 263201
type: SpeciesReference

817066
value: 0.0
type: LocalParameter

275840
name: R_aldehyde_dehydrogenase__butanal__NAD_
type: Reaction
kinetic law: 750198
fast: false
product: 750161
reactant: 750124
reactant: 750149
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
product: 750186
product: 750174
reactant: 750136
reversible: false

997157
stoichiometry: 1.0
species: 263621
type: SpeciesReference

004727
units: 716537
value: 0.002327
type: LocalParameter

742447
stoichiometry: 1.0
species: 251342
type: SpeciesReference

772702
value: 0.0
type: LocalParameter

958368
stoichiometry: 1.0
species: 251262
type: SpeciesReference

241903
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Crotonoyl_CoA_C25H36N7O17P3S
type: Species

950633
stoichiometry: 1.0
species: 258322
type: SpeciesReference

775687
value: 0.0
type: LocalParameter

728356
stoichiometry: 1.0
species: 242543
type: SpeciesReference

881923
stoichiometry: 1.0
species: 237764
type: SpeciesReference

757080
value: -0.024074
type: LocalParameter

852496
stoichiometry: 1.0
species: 251342
type: SpeciesReference

834029
value: 0.0
type: LocalParameter

812653
stoichiometry: 1.0
species: 246383
type: SpeciesReference

266061
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Cobinamide_C48H72CoN11O8
type: Species

277160
kinetic law: 758408
product: 758396
reactant: 758384
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_L_ascorbate_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

897340
stoichiometry: 1.0
species: 262781
type: SpeciesReference

724577
stoichiometry: 1.0
species: 262041
type: SpeciesReference

309997
kinetic law: 971941
product: 971929
product: 971917
reactant: 971905
notes: GENE_ASSOCIATION: b0415 PROTEIN_ASSOCIATION: RibE SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.9
fast: false
reversible: false
name: R_riboflavin_synthase
type: Reaction

762462
units: 716537
value: 0.0
type: LocalParameter

236594
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_3__GMP_C10H12N5O8P
type: Species

759240
stoichiometry: 1.0
species: 239803
type: SpeciesReference

853679
units: 716537
value: 0.0
type: LocalParameter

808813
units: 716537
value: 0.0
type: LocalParameter

930077
units: 716537
value: 0.0
type: LocalParameter

924214
stoichiometry: 1.0
species: 256062
type: SpeciesReference

740366
value: 0.0
type: LocalParameter

900727
stoichiometry: 1.0
species: 251222
type: SpeciesReference

751277
units: 716537
value: -999999.0
type: LocalParameter

955354
stoichiometry: 1.0
species: 251562
type: SpeciesReference

763626
stoichiometry: 1.0
species: 242023
type: SpeciesReference

866913
stoichiometry: 1.0
species: 237584
type: SpeciesReference

798374
value: -0.021566
type: LocalParameter

960261
stoichiometry: 1.0
species: 258062
type: SpeciesReference

941978
value: 0.0
type: LocalParameter

755706
units: 716537
value: 999999.0
type: LocalParameter

243563
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_coprogen_C35H52N6O13Fe
type: Species

283959
kinetic law: 803664
product: 803652
reactant: 803640
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_2__3__Cyclic_AMP_exchange
type: Reaction

884798
value: 0.0
type: LocalParameter

768064
stoichiometry: 2.0
species: 251342
type: SpeciesReference

977356
units: 716537
value: 0.0
type: LocalParameter

861337
stoichiometry: 1.0
species: 249722
type: SpeciesReference

816789
units: 716537
value: 0.0
type: LocalParameter

942925
units: 716537
value: 0.0
type: LocalParameter

942232
stoichiometry: 1.0
species: 251222
type: SpeciesReference

717632
units: 716537
value: 0.0
type: LocalParameter

830558
stoichiometry: 1.0
species: 263021
type: SpeciesReference

288239
kinetic law: 824392
product: 824380
reactant: 824368
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Sodium_exchange
type: Reaction

798155
stoichiometry: 1.0
species: 251622
type: SpeciesReference

986228
value: 0.0
type: LocalParameter

799706
stoichiometry: 1.0
species: 246623
type: SpeciesReference

936961
stoichiometry: 1.0
species: 236054
type: SpeciesReference

927130
stoichiometry: 1.0
species: 255322
type: SpeciesReference

282179
reactant: 792899
kinetic law: 792935
reactant: 792887
type: Reaction
name: R_Dihydroneopterin_monophosphate_dephosphorylase
reversible: false
fast: false
product: 792923
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
product: 792911

770977
units: 716537
value: 999999.0
type: LocalParameter

780610
value: -0.016049
type: LocalParameter

304817
product: 938180
kinetic law: 938204
product: 938192
reactant: 938156
notes: GENE_ASSOCIATION: ( b2965 or b0693 ) PROTEIN_ASSOCIATION: ( SpeC ) or ( SpeF ) SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 4.1.1.17
name: R_Ornithine_Decarboxylase
reversible: false
type: Reaction
reactant: 938168
fast: false

308077
reactant: 959898
reversible: false
notes: GENE_ASSOCIATION: b1015 PROTEIN_ASSOCIATION: PutPec SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
product: 959922
kinetic law: 959946
reactant: 959910
fast: false
name: R_NaPropionate_symporter__periplasm_
type: Reaction
product: 959934

957408
units: 716537
value: 0.0
type: LocalParameter

981165
units: 716537
value: 0.0
type: LocalParameter

875981
stoichiometry: 1.0
species: 251282
type: SpeciesReference

276040
product: 751363
name: R_apolipoprotein_N_acyltransferase__phosphatidylethanolamine__periplasm_
notes: GENE_ASSOCIATION: ( b0657 and b1677 ) PROTEIN_ASSOCIATION: ( Lnt and Lpp ) SUBSYSTEM: S_Unassigned PROTEIN_CLASS:
reactant: 751350
kinetic law: 751387
fast: false
product: 751375
reactant: 751337
reversible: false
type: Reaction

855174
value: 0.0
type: LocalParameter

970025
units: 716537
value: 0.0
type: LocalParameter

961746
stoichiometry: 1.0
species: 259161
type: SpeciesReference

963254
stoichiometry: 1.0
species: 241883
type: SpeciesReference

302658
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 2.7.1.100
type: Reaction
reversible: false
product: 919838
reactant: 919790
fast: false
product: 919814
name: R_5_methylthioribose_kinase
kinetic law: 919850
product: 919826
reactant: 919802

726380
stoichiometry: 1.0
species: 258942
type: SpeciesReference

987131
units: 716537
value: 0.0
type: LocalParameter

285999
kinetic law: 813546
product: 813534
reactant: 813522
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Formaldehyde_exchange
type: Reaction

727107
units: 716537
value: 0.110815
type: LocalParameter

273080
reactant: 733486
fast: false
type: Reaction
reversible: false
product: 733511
reactant: 733462
product: 733524
product: 733499
name: R_Aminobutyraldehyde_dehydrogenase
kinetic law: 733537
reactant: 733474
notes: GENE_ASSOCIATION: b1444 PROTEIN_ASSOCIATION: YdcW SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 1.2.1.19

003120
stoichiometry: 1.0
species: 264541
type: SpeciesReference

821029
units: 716537
value: 999999.0
type: LocalParameter

735088
stoichiometry: 1.0
species: 259102
type: SpeciesReference

891546
stoichiometry: 1.0
species: 251342
type: SpeciesReference

812104
units: 716537
value: 0.0
type: LocalParameter

302657
kinetic law: 919718
product: 919706
reactant: 919694
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 5.3.1.23
fast: false
reversible: true
name: R_5_methylthioribose_1_phosphate_isomerase
type: Reaction

263601
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_UDPglucose_C15H22N2O17P2
type: Species

851818
stoichiometry: 1.0
species: 250302
type: SpeciesReference

842983
units: 716537
value: 0.0
type: LocalParameter

880025
stoichiometry: 1.0
species: 241883
type: SpeciesReference

793723
units: 716537
value: 0.0
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779406
units: 716537
value: 0.0
type: LocalParameter

289479
kinetic law: 830389
product: 830377
reactant: 830365
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Tyramine_exchange
type: Reaction

876505
stoichiometry: 1.0
species: 236894
type: SpeciesReference

775469
value: 0.0
type: LocalParameter

803508
value: 0.0
type: LocalParameter

894889
units: 716537
value: 0.0
type: LocalParameter

885464
value: 0.0
type: LocalParameter

748351
units: 716537
value: 999999.0
type: LocalParameter

769708
stoichiometry: 1.0
species: 258102
type: SpeciesReference

824706
units: 716537
value: 999999.0
type: LocalParameter

944402
units: 716537
value: 0.0
type: LocalParameter

239983
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Agmatine_C5H16N4
type: Species

953724
stoichiometry: 1.0
species: 251262
type: SpeciesReference

766188
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value: 999999.0
type: LocalParameter

897799
units: 716537
value: 0.0
type: LocalParameter

238283
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
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994196
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value: 0.0
type: LocalParameter

854824
units: 716537
value: 0.0
type: LocalParameter

743411
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825588
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741299
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812433
units: 716537
value: 0.0
type: LocalParameter

992468
units: 716537
value: 0.0
type: LocalParameter

872316
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type: LocalParameter

731130
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species: 238024
type: SpeciesReference

886830
units: 716537
value: -0.398883
type: LocalParameter

784143
units: 716537
value: 999999.0
type: LocalParameter

763408
value: 0.0
type: LocalParameter

890736
units: 716537
value: 0.0
type: LocalParameter

267301
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Fucose_C6H12O5
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276780
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reactant: 755997
name: R_aerobactin_transport_via_ton_system__extracellular_
product: 756009
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
product: 756021
reversible: false
kinetic law: 756033
fast: false
type: Reaction

881704
stoichiometry: 1.0
species: 252002
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864045
value: 0.0
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911978
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species: 251222
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811164
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794989
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value: 0.0
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775252
stoichiometry: 1.0
species: 251382
type: SpeciesReference

958584
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836605
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888517
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species: 236454
type: SpeciesReference

752421
units: 716537
value: 0.0
type: LocalParameter

753921
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species: 240883
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902722
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species: 253642
type: SpeciesReference

813811
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species: 247323
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291179
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product: 842014
kinetic law: 842063
fast: false
reactant: 841977
reversible: false
product: 842051
product: 842027
reactant: 842002
reactant: 841990
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notes: GENE_ASSOCIATION: ( b0153 and b0151 and b0152 ) PROTEIN_ASSOCIATION: ( FhuB and FhuC and FhuD ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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834246
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species: 251522
type: SpeciesReference

904994
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species: 238823
type: SpeciesReference

259561
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_O_Phospho_L_serine_C3H6NO6P
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960790
stoichiometry: 1.0
species: 259141
type: SpeciesReference

842002
stoichiometry: 1.0
species: 247463
type: SpeciesReference

837114
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type: LocalParameter

792051
units: 716537
value: 0.0
type: LocalParameter

885888
stoichiometry: 1.0
species: 252522
type: SpeciesReference

793007
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species: 240043
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933090
stoichiometry: 1.0
species: 264241
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species: 243343
type: SpeciesReference

818440
units: 716537
value: 0.0
type: LocalParameter

884641
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type: LocalParameter

756105
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species: 241323
type: SpeciesReference

924446
stoichiometry: 1.0
species: 251222
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981585
stoichiometry: 1.0
species: 260861
type: SpeciesReference

906205
stoichiometry: 1.0
species: 253962
type: SpeciesReference

725965
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791278
stoichiometry: 1.0
species: 245703
type: SpeciesReference

736898
units: 716537
value: 0.0
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946160
units: 716537
value: 0.0
type: LocalParameter

264341
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
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type: Species

935156
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species: 256522
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961127
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species: 259841
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933235
stoichiometry: 1.0
species: 251342
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946875
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species: 258282
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776621
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species: 241883
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955186
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species: 258222
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984673
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species: 255982
type: SpeciesReference

722942
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species: 259141
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818229
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790425
units: 716537
value: 0.0
type: LocalParameter

913583
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type: LocalParameter

248263
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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902090
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species: 251462
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845544
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296038
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name: R_Glucuronate_1_phosphate_phosphatase__periplasm_
type: Reaction
reactant: 875461
reversible: false
product: 875485
fast: false
reactant: 875449
kinetic law: 875497

834876
stoichiometry: 1.0
species: 261501
type: SpeciesReference

887580
stoichiometry: 1.0
species: 252202
type: SpeciesReference

819018
units: 716537
value: 0.0
type: LocalParameter

764143
stoichiometry: 1.0
species: 242103
type: SpeciesReference

891315
units: 716537
value: 0.0
type: LocalParameter

783432
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type: LocalParameter

807433
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species: 265721
type: SpeciesReference

746842
stoichiometry: 1.0
species: 240063
type: SpeciesReference

732219
stoichiometry: 1.0
species: 256762
type: SpeciesReference

864651
stoichiometry: 1.0
species: 240703
type: SpeciesReference

245603
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Deoxyinosine_C10H12N4O4
type: Species

743821
value: 0.0
type: LocalParameter

720040
value: 0.0
type: LocalParameter

248262
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Fucose_C6H12O5
type: Species

789882
value: 0.0
type: LocalParameter

260761
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
type: Species

882444
units: 716537
value: -999999.0
type: LocalParameter

962918
stoichiometry: 1.0
species: 240083
type: SpeciesReference

275540
kinetic law: 748206
product: 748193
reactant: 748181
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fast: false
reversible: true
name: R_alanine_racemase
type: Reaction

819620
stoichiometry: 1.0
species: 251402
type: SpeciesReference

312397
kinetic law: 986721
product: 986709
product: 986697
reactant: 986685
notes: GENE_ASSOCIATION: ( b3117 or b1814 or b2797 or b3772 ) PROTEIN_ASSOCIATION: ( TdcB ) or ( SdaAec ) or ( SdaB ) or ( IlvA ) SUBSYSTEM: S_Valine__Leucine__and_Isoleucine_Metabolism PROTEIN_CLASS:
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reversible: false
name: R_L_threonine_deaminase
type: Reaction

975611
stoichiometry: 1.0
species: 260641
type: SpeciesReference

848086
stoichiometry: 1.0
species: 248143
type: SpeciesReference

734688
units: 716537
value: 999999.0
type: LocalParameter

921086
units: 716537
value: 999999.0
type: LocalParameter

832748
stoichiometry: 2.23E-4
species: 259681
type: SpeciesReference

835405
stoichiometry: 1.0
species: 257022
type: SpeciesReference

251423
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Bicarbonate_CHO3
type: Species

908391
stoichiometry: 1.0
species: 253782
type: SpeciesReference

771327
units: 716537
value: 0.0
type: LocalParameter

854405
stoichiometry: 1.0
species: 248662
type: SpeciesReference

956731
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type: LocalParameter

978308
stoichiometry: 1.0
species: 261661
type: SpeciesReference

867442
stoichiometry: 1.0
species: 250062
type: SpeciesReference

875136
units: 716537
value: 0.0
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971618
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type: LocalParameter

754789
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274460
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kinetic law: 741625
reactant: 741576
product: 741613
reactant: 741588
reversible: false
name: R_adenosylmethionine_decarboxylase
type: Reaction
product: 741600

269061
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Methionine_Sulfoxide_C5H11NO3S
type: Species

967626
value: 0.0
type: LocalParameter

789207
stoichiometry: 1.0
species: 255302
type: SpeciesReference

900872
stoichiometry: 1.0
species: 248403
type: SpeciesReference

960489
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994824
stoichiometry: 1.0
species: 263241
type: SpeciesReference

233894
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_1_Acyl_sn_glycero_3_phosphoglycerol__n_C181__C24H46O9P1
type: Species

853450
stoichiometry: 1.0
species: 251342
type: SpeciesReference

972940
units: 716537
value: 0.0
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741069
units: 716537
value: -999999.0
type: LocalParameter

886359
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type: LocalParameter

251422
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
type: Species

945640
value: 0.0
type: LocalParameter

928377
value: 0.0
type: LocalParameter

950208
value: 0.0
type: LocalParameter

952206
stoichiometry: 1.0
species: 258782
type: SpeciesReference

847373
value: -0.001003
type: LocalParameter

255442
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
type: Species

290959
kinetic law: 840549
product: 840537
reactant: 840525
notes: GENE_ASSOCIATION: b3040 PROTEIN_ASSOCIATION: ZupT SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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reversible: false
name: R_iron__2__transport_in_via_permease__no_H_
type: Reaction

732944
stoichiometry: 1.0
species: 263961
type: SpeciesReference

738326
stoichiometry: 1.0
species: 244923
type: SpeciesReference

297618
reversible: false
product: 885028
type: Reaction
reactant: 885004
product: 885040
reactant: 885016
notes: GENE_ASSOCIATION: b0595 PROTEIN_ASSOCIATION: EntB SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 3.3.2.1
kinetic law: 885052
fast: false
name: R_isochorismatase

874494
stoichiometry: 1.0
species: 256042
type: SpeciesReference

758444
value: 0.0
type: LocalParameter

234114
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_Pyrroline_5_carboxylate_C5H6NO2
type: Species

979510
units: 716537
value: 999999.0
type: LocalParameter

879614
units: 716537
value: 0.0
type: LocalParameter

807287
value: 0.0
type: LocalParameter

725820
units: 716537
value: 0.0
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863539
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870618
units: 716537
value: 999999.0
type: LocalParameter

885671
units: 716537
value: 999999.0
type: LocalParameter

854617
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species: 255942
type: SpeciesReference

294198
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product: 863853
reactant: 863829
reactant: 863841
type: Reaction
notes: GENE_ASSOCIATION: ( b1812 or b0485 or b1524 ) PROTEIN_ASSOCIATION: ( PabBec ) or ( YbaS ) or ( YneH ) SUBSYSTEM: S_Glutamate_Metabolism PROTEIN_CLASS: 3.5.1.2
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product: 863865
kinetic law: 863878
name: R_glutaminase

981985
stoichiometry: 1.0
species: 260901
type: SpeciesReference

804476
value: 0.0
type: LocalParameter

898595
units: 716537
value: 0.0
type: LocalParameter

740790
stoichiometry: 1.0
species: 249962
type: SpeciesReference

841167
value: -0.004012
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924675
value: 0.0
type: LocalParameter

738974
units: 716537
value: 0.0
type: LocalParameter

834452
value: -0.004012
type: LocalParameter

794833
stoichiometry: 1.0
species: 246303
type: SpeciesReference

984889
stoichiometry: 1.0
species: 239803
type: SpeciesReference

729732
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species: 251342
type: SpeciesReference

259121
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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type: Species

977899
stoichiometry: 1.0
species: 250882
type: SpeciesReference

737395
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species: 239283
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752639
units: 716537
value: 999999.0
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803979
units: 716537
value: 999999.0
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918604
stoichiometry: 1.0
species: 261561
type: SpeciesReference

985286
units: 716537
value: -999999.0
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881219
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species: 257062
type: SpeciesReference

919308
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type: LocalParameter

759830
stoichiometry: 1.0
species: 241763
type: SpeciesReference

267741
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Gluconate_C6H11O7
type: Species

789678
value: 0.0
type: LocalParameter

867214
stoichiometry: 1.0
species: 255962
type: SpeciesReference

761485
units: 716537
value: 0.0
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932221
units: 716537
value: 0.0
type: LocalParameter

769997
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value: 0.0
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741721
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species: 259141
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951261
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species: 250302
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272860
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type: Reaction
product: 732063
reversible: false
kinetic law: 732099
reactant: 732051
reactant: 732026
reactant: 732038
name: R_acyl_acyl_carrier_protein_synthetase___n_C181_
product: 732075
product: 732087
fast: false

948819
value: -0.008025
type: LocalParameter

310917
reactant: 977656
kinetic law: 977692
reactant: 977644
product: 977668
name: R_L_serine_via_sodium_symport__periplasm_
type: Reaction
product: 977680
fast: false
reversible: false
notes: GENE_ASSOCIATION: b3089 PROTEIN_ASSOCIATION: SstT SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:

784733
stoichiometry: 1.0
species: 251342
type: SpeciesReference

845774
units: 716537
value: 0.0
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798591
units: 716537
value: 0.0
type: LocalParameter

936311
units: 716537
value: 1.64E-4
type: LocalParameter

313556
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reactant: 997023
type: Reaction
notes: GENE_ASSOCIATION: b0480 PROTEIN_ASSOCIATION: UshA SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 3.6.1.45
kinetic law: 997083
name: R_UDPglucose_pyrophosphohydrolase
reactant: 997035
product: 997047
product: 997059
fast: false
product: 997071

888963
units: 716537
value: 0.331884
type: LocalParameter

863551
stoichiometry: 1.0
species: 249962
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003337
stoichiometry: 1.0
species: 264661
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979981
units: 716537
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type: LocalParameter

308757
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product: 964230
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reactant: 964194
kinetic law: 964254
reversible: false
fast: false
reactant: 964182
reactant: 964206
product: 964242
type: Reaction
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992602
stoichiometry: 1.0
species: 251222
type: SpeciesReference

993433
stoichiometry: 1.0
species: 241883
type: SpeciesReference

823110
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species: 254522
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811778
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species: 245083
type: SpeciesReference

932838
stoichiometry: 1.0
species: 240703
type: SpeciesReference

783660
value: 0.0
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785506
stoichiometry: 1.0
species: 256042
type: SpeciesReference

802364
stoichiometry: 1.0
species: 247263
type: SpeciesReference

939520
value: 0.0
type: LocalParameter

915671
value: 0.0
type: LocalParameter

759685
units: 716537
value: 999999.0
type: LocalParameter

894671
stoichiometry: 1.0
species: 251482
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280819
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product: 783239
kinetic law: 783251
type: Reaction
product: 783227
name: R_2_3_diaminopropionate_amonnia_lyase
reactant: 783203
reversible: false
fast: false

895035
value: 0.0
type: LocalParameter

729502
units: 716537
value: 0.262148
type: LocalParameter

957841
stoichiometry: 1.0
species: 258182
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800007
units: 716537
value: 0.0
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859512
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value: -999999.0
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879409
stoichiometry: 1.0
species: 239803
type: SpeciesReference

763843
units: 716537
value: 0.0
type: LocalParameter

834682
units: 716537
value: 999999.0
type: LocalParameter

914956
value: 0.0
type: LocalParameter

275100
kinetic law: 745527
product: 745515
reactant: 745503
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_agmatine_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

738769
units: 716537
value: 0.0
type: LocalParameter

936528
units: 716537
value: 1.64E-4
type: LocalParameter

870824
stoichiometry: 1.0
species: 250302
type: SpeciesReference

313557
kinetic law: 997181
product: 997169
reactant: 997157
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_UDPglucose_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

738531
value: 0.0
type: LocalParameter

279920
reversible: false
product: 775892
reactant: 775844
reactant: 775856
kinetic law: 775904
type: Reaction
name: R_Cytosine_deaminase
notes: GENE_ASSOCIATION: b0337 PROTEIN_ASSOCIATION: CodA SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.5.4.1
reactant: 775868
product: 775880
fast: false

817285
value: -0.092283
type: LocalParameter

909328
stoichiometry: 1.0
species: 255502
type: SpeciesReference

717403
units: 716537
value: -999999.0
type: LocalParameter

869599
stoichiometry: 1.0
species: 250602
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829145
units: 716537
value: 0.0
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914740
units: 716537
value: 0.0
type: LocalParameter

991222
units: 716537
value: -999999.0
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756874
stoichiometry: 1.0
species: 239963
type: SpeciesReference

296018
kinetic law: 875377
product: 875365
reactant: 875353
notes: GENE_ASSOCIATION: b3092 PROTEIN_ASSOCIATION: UxaC SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 5.3.1.12
fast: false
reversible: true
name: R_glucuronate_isomerase__D_galacturonate_
type: Reaction

835613
units: 716537
value: 999999.0
type: LocalParameter

242183
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_butanesulfonate_C4H9O3S
type: Species

925198
stoichiometry: 1.0
species: 251342
type: SpeciesReference

839304
units: 716537
value: 999999.0
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004956
units: 716537
value: 999999.0
type: LocalParameter

864214
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716684
stoichiometry: 1.0
species: 233154
type: SpeciesReference

722242
units: 716537
value: 0.0
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740135
units: 716537
value: 0.0
type: LocalParameter

828480
units: 716537
value: 999999.0
type: LocalParameter

959077
value: 0.0
type: LocalParameter

850708
stoichiometry: 1.0
species: 250302
type: SpeciesReference

747524
units: 716537
value: 999999.0
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986926
stoichiometry: 1.0
species: 261681
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749844
stoichiometry: 1.0
species: 251222
type: SpeciesReference

259122
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Prephenate_C10H8O6
type: Species

831138
stoichiometry: 1.0
species: 263881
type: SpeciesReference

290419
reactant: 836847
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reversible: false
product: 836859
fast: false
reactant: 836811
product: 836871
notes: GENE_ASSOCIATION: ( b1805 or b1701 ) PROTEIN_ASSOCIATION: ( FadD ) or ( FadK ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 6.2.1.3
product: 836883
type: Reaction
reactant: 836835
reactant: 836823
product: 836895
kinetic law: 836907

877476
stoichiometry: 1.0
species: 259141
type: SpeciesReference

903239
value: -0.002006
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947818
value: 0.0
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961974
stoichiometry: 1.0
species: 251342
type: SpeciesReference

755308
stoichiometry: 2.0
species: 241363
type: SpeciesReference

804681
units: 716537
value: 0.0
type: LocalParameter

233534
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_1_4_alpha_D_glucan_C36H62O31
type: Species

789435
stoichiometry: 1.0
species: 255942
type: SpeciesReference

851263
units: 716537
value: 999999.0
type: LocalParameter

726173
units: 716537
value: 999999.0
type: LocalParameter

903010
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species: 239803
type: SpeciesReference

727314
stoichiometry: 1.0
species: 255982
type: SpeciesReference

747950
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type: LocalParameter

281619
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notes: GENE_ASSOCIATION: b2541 PROTEIN_ASSOCIATION: HcaB SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
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name: R_2_3_dihydroxyphenylpropionate_dehydrogenase
kinetic law: 789484
reactant: 789423
reversible: false
type: Reaction
reactant: 789435
product: 789447
product: 789460

256502
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
type: Species

907280
units: 716537
value: 0.0
type: LocalParameter

821885
units: 716537
value: 0.0
type: LocalParameter

950646
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species: 258902
type: SpeciesReference

297838
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notes: GENE_ASSOCIATION: ( b3454 and b3455 and b3457 and b3460 and b3456 ) PROTEIN_ASSOCIATION: ( LivF and LivG and LivH and LivJ and LivM ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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reactant: 886384
reversible: false
product: 886420
product: 886408
product: 886432
type: Reaction
reactant: 886371
kinetic law: 886456
fast: false
product: 886444

803737
stoichiometry: 1.0
species: 234254
type: SpeciesReference

748904
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type: LocalParameter

771765
units: 716537
value: 0.0
type: LocalParameter

876919
stoichiometry: 1.0
species: 255942
type: SpeciesReference

810392
value: 0.0
type: LocalParameter

728968
stoichiometry: 1.0
species: 261461
type: SpeciesReference

956114
stoichiometry: 1.0
species: 257402
type: SpeciesReference

843686
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type: LocalParameter

847166
stoichiometry: 1.0
species: 247943
type: SpeciesReference

816994
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type: LocalParameter

906641
stoichiometry: 3.0
species: 251382
type: SpeciesReference

989495
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species: 255002
type: SpeciesReference

907884
value: 0.0
type: LocalParameter

966857
value: 0.0
type: LocalParameter

762682
stoichiometry: 1.0
species: 251382
type: SpeciesReference

806045
units: 716537
value: 0.0
type: LocalParameter

891750
units: 716537
value: 0.130838
type: LocalParameter

255882
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Nicotinate_C6H4NO2
type: Species

945373
units: 716537
value: -999999.0
type: LocalParameter

890375
units: 716537
value: 0.0
type: LocalParameter

770748
units: 716537
value: -999999.0
type: LocalParameter

971953
units: 716537
value: 0.0
type: LocalParameter

880254
units: 716537
value: 999999.0
type: LocalParameter

892415
units: 716537
value: 0.0
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895479
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species: 262781
type: SpeciesReference

972507
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species: 259941
type: SpeciesReference

935978
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type: LocalParameter

721551
units: 716537
value: 0.0
type: LocalParameter

294878
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name: R_Glycolate_oxidase
reactant: 868167
type: Reaction
product: 868191
notes: GENE_ASSOCIATION: ( b2979 and b4467 and b4468 ) PROTEIN_ASSOCIATION: GlcDEF SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
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reactant: 868154
product: 868179
fast: false

970253
units: 716537
value: 999999.0
type: LocalParameter

285319
kinetic law: 810260
product: 810248
reactant: 810235
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_coprogen_unloaded__no_Fe_III___exchange
type: Reaction

254862
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_magnesium_Mg
type: Species

259562
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_O_Phospho_L_serine_C3H6NO6P
type: Species

797853
stoichiometry: 1.0
species: 251342
type: SpeciesReference

966263
stoichiometry: 1.0
species: 259562
type: SpeciesReference

254202
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Maltotriose_C18H32O16
type: Species

900025
stoichiometry: 1.0
species: 248443
type: SpeciesReference

924882
units: 716537
value: 999999.0
type: LocalParameter

772715
stoichiometry: 2.0
species: 243563
type: SpeciesReference

833499
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type: LocalParameter

922848
units: 716537
value: 0.0
type: LocalParameter

748338
units: 716537
value: 0.0
type: LocalParameter

881911
value: 0.0
type: LocalParameter

307377
kinetic law: 955498
product: 955462
type: Reaction
reversible: false
product: 955486
reactant: 955438
product: 955474
reactant: 955450
name: R_Phospholipase_A1__phosphatidylglycerol__n_C180___periplasm_
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812665
stoichiometry: 1.0
species: 266801
type: SpeciesReference

834017
units: 716537
value: 999999.0
type: LocalParameter

736091
stoichiometry: 1.0
species: 239103
type: SpeciesReference

720886
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type: LocalParameter

949789
stoichiometry: 1.0
species: 258942
type: SpeciesReference

959293
value: 0.0
type: LocalParameter

762474
units: 716537
value: 999999.0
type: LocalParameter

900715
stoichiometry: 1.0
species: 234734
type: SpeciesReference

285559
kinetic law: 811416
product: 811404
reactant: 811392
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Decanoate__n_C100__exchange
type: Reaction

924226
stoichiometry: 1.0
species: 256082
type: SpeciesReference

930065
value: 0.0
type: LocalParameter

957637
units: 716537
value: 0.0
type: LocalParameter

978599
units: 716537
value: 999999.0
type: LocalParameter

785964
stoichiometry: 1.0
species: 251342
type: SpeciesReference

740354
units: 716537
value: 999999.0
type: LocalParameter

286299
kinetic law: 815003
product: 814991
reactant: 814978
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_D_Fructuronate_exchange
type: Reaction

866925
stoichiometry: 1.0
species: 239803
type: SpeciesReference

798386
stoichiometry: 1.0
species: 251342
type: SpeciesReference

755718
value: 0.0
type: LocalParameter

941966
units: 716537
value: 0.0
type: LocalParameter

960273
stoichiometry: 1.0
species: 251342
type: SpeciesReference

731578
value: 0.0
type: LocalParameter

914439
stoichiometry: 1.0
species: 255482
type: SpeciesReference

239303
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_N_Acetylmuramate_C11H18NO8
type: Species

936732
stoichiometry: 1.0
species: 251342
type: SpeciesReference

763614
stoichiometry: 1.0
species: 260141
type: SpeciesReference

874059
stoichiometry: 3.0
species: 251222
type: SpeciesReference

976235
value: 0.0
type: LocalParameter

913378
stoichiometry: 2.0
species: 251342
type: SpeciesReference

731360
stoichiometry: 1.0
species: 241203
type: SpeciesReference

886600
units: 716537
value: 999999.0
type: LocalParameter

244343
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Cytidine_C9H13N3O5
type: Species

880883
stoichiometry: 1.0
species: 258902
type: SpeciesReference

829867
value: -0.196603
type: LocalParameter

997169
stoichiometry: 1.0
species: 263641
type: SpeciesReference

817078
units: 716537
value: 0.0
type: LocalParameter

775024
units: 716537
value: -999999.0
type: LocalParameter

831379
units: 716537
value: 999999.0
type: LocalParameter

885232
stoichiometry: 1.0
species: 238023
type: SpeciesReference

794120
stoichiometry: 1.0
species: 262141
type: SpeciesReference

004715
value: 0.0
type: LocalParameter

825793
units: 716537
value: 0.0
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775699
stoichiometry: 1.0
species: 238823
type: SpeciesReference

728344
value: 0.0
type: LocalParameter

268381
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Homoserine_C4H9NO3
type: Species

797637
stoichiometry: 1.0
species: 261461
type: SpeciesReference

855162
units: 716537
value: 0.0
type: LocalParameter

823338
units: 716537
value: 0.0
type: LocalParameter

970037
value: -0.004012
type: LocalParameter

987143
value: -0.077237
type: LocalParameter

759228
stoichiometry: 1.0
species: 241643
type: SpeciesReference

860794
value: 0.0
type: LocalParameter

963242
stoichiometry: 1.0
species: 241763
type: SpeciesReference

747106
stoichiometry: 1.0
species: 237964
type: SpeciesReference

961758
stoichiometry: 3.0
species: 251222
type: SpeciesReference

880038
stoichiometry: 1.0
species: 251222
type: SpeciesReference

737830
stoichiometry: 1.0
species: 247043
type: SpeciesReference

249542
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Glucose_C6H12O6
type: Species

821017
units: 716537
value: 0.0
type: LocalParameter

891534
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species: 239803
type: SpeciesReference

735076
stoichiometry: 1.0
species: 258902
type: SpeciesReference

889748
value: 0.0
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793735
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type: LocalParameter

875993
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species: 251322
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984182
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species: 261641
type: SpeciesReference

306577
notes: GENE_ASSOCIATION: ( b1278 or b0418 ) PROTEIN_ASSOCIATION: ( PgpB ) or ( PgpA ) SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.3.27
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product: 950268
reactant: 950256
kinetic law: 950292
fast: false
name: R_phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C161_
product: 950280
type: Reaction
reactant: 950244

779418
value: -0.096296
type: LocalParameter

851806
value: 0.0
type: LocalParameter

842995
units: 716537
value: 999999.0
type: LocalParameter

266081
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Cob_I_alamin_C62H88CoN13O14P
type: Species

890158
stoichiometry: 1.0
species: 237384
type: SpeciesReference

971400
value: -0.004012
type: LocalParameter

833908
units: 716537
value: 0.0
type: LocalParameter

816777
value: 0.0
type: LocalParameter

761051
units: 716537
value: 0.0
type: LocalParameter

258981
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
type: Species

942937
units: 716537
value: 999999.0
type: LocalParameter

768052
stoichiometry: 1.0
species: 243543
type: SpeciesReference

236574
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_3_Dehydroshikimate_C7H7O5
type: Species

977368
value: -0.046142
type: LocalParameter

812116
units: 716537
value: 999999.0
type: LocalParameter

302098
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product: 913511
reactant: 913499
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_magnesium__Mg2__transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

799718
stoichiometry: 1.0
species: 251382
type: SpeciesReference

751048
value: 0.0
type: LocalParameter

942220
value: -0.009028
type: LocalParameter

830546
value: -0.163502
type: LocalParameter

929592
units: 716537
value: 0.0
type: LocalParameter

259781
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Ubiquinol_8_C49H76O4
type: Species

798167
stoichiometry: 1.0
species: 255982
type: SpeciesReference

717644
value: 0.0
type: LocalParameter

731797
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species: 259141
type: SpeciesReference

258982
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M__R__Pantothenate_C9H16NO5
type: Species

780622
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species: 244343
type: SpeciesReference

954668
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species: 234994
type: SpeciesReference

770965
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value: -999999.0
type: LocalParameter

778998
value: 0.0
type: LocalParameter

717851
units: 716537
value: 0.0
type: LocalParameter

934481
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value: 0.0
type: LocalParameter

793445
units: 716537
value: 0.0
type: LocalParameter

786488
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value: 999999.0
type: LocalParameter

888504
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species: 255942
type: SpeciesReference

866707
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value: 999999.0
type: LocalParameter

890724
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898208
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type: LocalParameter

775240
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species: 243803
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864033
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value: 999999.0
type: LocalParameter

309457
kinetic law: 968585
product: 968573
reactant: 968561
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_putrescine_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

720668
stoichiometry: 1.0
species: 259141
type: SpeciesReference

904982
value: 0.0
type: LocalParameter

813823
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species: 267041
type: SpeciesReference

834234
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species: 251342
type: SpeciesReference

801509
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species: 252942
type: SpeciesReference

246583
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
type: Species

902710
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species: 251342
type: SpeciesReference

899170
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species: 241043
type: SpeciesReference

958597
stoichiometry: 1.0
species: 237984
type: SpeciesReference

802751
value: 0.0
type: LocalParameter

298498
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reactant: 890532
product: 890556
reversible: false
fast: false
type: Reaction
notes: GENE_ASSOCIATION: ( b2342 or b3845 ) PROTEIN_ASSOCIATION: ( FadI ) or ( FadA ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.16
name: R_3_ketoacyl_CoA_thiolase
product: 890544
kinetic law: 890568

286079
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product: 813921
reactant: 813908
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_ferric_2_3_dihydroxybenzoylserine_exchange
type: Reaction

885451
units: 716537
value: 999999.0
type: LocalParameter

782805
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species: 257502
type: SpeciesReference

829434
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value: 0.0
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790221
value: 0.0
type: LocalParameter

302878
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product: 922666
reactant: 922617
reactant: 922641
product: 922678
notes: GENE_ASSOCIATION: b0931 PROTEIN_ASSOCIATION: PncB SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.4.2.11
type: Reaction
kinetic law: 922716
reversible: false
reactant: 922653
product: 922703
fast: false
product: 922690
name: R_nicotinic_acid_mononucleotide_pyrophosphorylase

766176
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value: 0.0
type: LocalParameter

924008
stoichiometry: 1.0
species: 244843
type: SpeciesReference

854836
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type: LocalParameter

897787
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type: LocalParameter

846937
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value: 0.0
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824718
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type: LocalParameter

944414
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953712
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type: LocalParameter

950426
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value: 0.0
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872328
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value: 0.220636
type: LocalParameter

784131
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value: 0.0
type: LocalParameter

837839
units: 716537
value: 999999.0
type: LocalParameter

731142
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species: 238043
type: SpeciesReference

876371
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species: 236654
type: SpeciesReference

825576
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value: 999999.0
type: LocalParameter

811151
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value: 999999.0
type: LocalParameter

307157
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product: 954000
reactant: 953988
type: Reaction
notes: GENE_ASSOCIATION: b3821 PROTEIN_ASSOCIATION: PldA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.32
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product: 954012
fast: false
kinetic law: 954036
product: 954024
reactant: 953976

812445
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type: LocalParameter

741287
units: 716537
value: 999999.0
type: LocalParameter

233314
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_1_2_Diacyl_sn_glycerol__dioctadecanoyl__n_C180__C39H76O5
type: Species

302877
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name: R_NAD_transhydrogenase
reactant: 922507
reversible: false
reactant: 922495
fast: false
notes: GENE_ASSOCIATION: ( b3962 or ( b1602 and b1603 ) ) PROTEIN_ASSOCIATION: ( SthA ) or ( Pnt ) SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS:
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product: 922532
type: Reaction

992456
value: 0.0
type: LocalParameter

872111
stoichiometry: 1.0
species: 250702
type: SpeciesReference

937395
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value: 0.0
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918821
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species: 255642
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790437
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913595
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species: 254902
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783444
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species: 234654
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864663
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species: 250042
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species: 248043
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732207
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species: 240703
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_chorismate_C10H8O6
type: Species

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species: 259961
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species: 243343
type: SpeciesReference

990255
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species: 262141
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819006
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764131
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species: 251382
type: SpeciesReference

891327
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value: 999999.0
type: LocalParameter

728128
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species: 243283
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882456
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value: 999999.0
type: LocalParameter

962906
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species: 239803
type: SpeciesReference

757068
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value: 0.0
type: LocalParameter

789894
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value: 3.29E-4
type: LocalParameter

244923
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
type: Species

845556
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819632
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species: 268241
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921074
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value: 0.0
type: LocalParameter

268981
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Melibiose_C12H22O11
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species: 257542
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species: 240303
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285779
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product: 812469
reactant: 812457
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_Dopamine_exchange
type: Reaction

837126
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value: 0.0
type: LocalParameter

984661
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species: 246243
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295578
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product: 872623
reactant: 872611
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_guanosine_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

841397
units: 716537
value: 999999.0
type: LocalParameter

981381
stoichiometry: 1.0
species: 260841
type: SpeciesReference

924458
stoichiometry: 1.0
species: 255742
type: SpeciesReference

736886
value: 0.0
type: LocalParameter

814918
units: 716537
value: 0.0
type: LocalParameter

818452
value: -0.056172
type: LocalParameter

884653
units: 716537
value: -6.766124
type: LocalParameter

295098
kinetic law: 869515
reactant: 869467
reactant: 869479
product: 869491
type: Reaction
notes: GENE_ASSOCIATION: b3052 PROTEIN_ASSOCIATION: RfaEec SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
name: R_D_glycero_D_manno_hepose_1_phosphate_adenyltransferase
product: 869503
reactant: 869455
fast: false
reversible: false

721008
value: 0.0
type: LocalParameter

981597
stoichiometry: 1.0
species: 260881
type: SpeciesReference

725953
units: 716537
value: 0.0
type: LocalParameter

955198
stoichiometry: 1.0
species: 235154
type: SpeciesReference

722930
stoichiometry: 1.0
species: 258282
type: SpeciesReference

772111
value: 0.0
type: LocalParameter

935144
stoichiometry: 1.0
species: 251342
type: SpeciesReference

946863
stoichiometry: 1.0
species: 251222
type: SpeciesReference

961115
stoichiometry: 1.0
species: 259821
type: SpeciesReference

946172
units: 716537
value: 999999.0
type: LocalParameter

758456
units: 716537
value: 0.0
type: LocalParameter

972953
value: 0.0
type: LocalParameter

860106
units: 716537
value: 999999.0
type: LocalParameter

290639
product: 838334
kinetic law: 838358
reversible: false
type: Reaction
product: 838346
fast: false
name: R_fructose_bisphosphatase
reactant: 838310
reactant: 838322
notes: GENE_ASSOCIATION: ( b3925 or b4232 ) PROTEIN_ASSOCIATION: ( GlpX ) or ( Fbp ) SUBSYSTEM: S_GlycolysisGluconeogenesis PROTEIN_CLASS: 3.1.3.11

739603
stoichiometry: 1.0
species: 249962
type: SpeciesReference

933222
stoichiometry: 1.0
species: 252862
type: SpeciesReference

870606
units: 716537
value: 0.0
type: LocalParameter

885683
value: 0.0
type: LocalParameter

259342
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_L_Proline_C5H9NO2
type: Species

846708
units: 716537
value: 0.0
type: LocalParameter

879626
value: 0.0
type: LocalParameter

979522
value: 0.0
type: LocalParameter

807299
units: 716537
value: 0.0
type: LocalParameter

980312
stoichiometry: 1.0
species: 259601
type: SpeciesReference

898583
value: 0.0
type: LocalParameter

844168
stoichiometry: 1.0
species: 260001
type: SpeciesReference

802147
units: 716537
value: 0.0
type: LocalParameter

313776
reactant: 999785
name: R_uracil_transport_in_via_proton_symport__periplasm_
product: 999821
type: Reaction
reactant: 999797
product: 999809
reversible: false
fast: false
notes: GENE_ASSOCIATION: b2497 PROTEIN_ASSOCIATION: UraA SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
kinetic law: 999833

967493
units: 716537
value: 999999.0
type: LocalParameter

792063
value: -0.004012
type: LocalParameter

729720
stoichiometry: 1.0
species: 239803
type: SpeciesReference

752203
stoichiometry: 1.0
species: 240923
type: SpeciesReference

249982
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Glutamate_C5H8NO4
type: Species

738986
units: 716537
value: 999999.0
type: LocalParameter

854604
stoichiometry: 1.0
species: 248842
type: SpeciesReference

841179
stoichiometry: 1.0
species: 247383
type: SpeciesReference

924687
units: 716537
value: 0.0
type: LocalParameter

834464
stoichiometry: 1.0
species: 244723
type: SpeciesReference

984877
stoichiometry: 1.0
species: 253582
type: SpeciesReference

804463
units: 716537
value: 999999.0
type: LocalParameter

982527
value: 0.0
type: LocalParameter

303477
fast: false
reactant: 928061
product: 928086
reactant: 928049
notes: GENE_ASSOCIATION: ( b2291 or b2744 or b4374 ) PROTEIN_ASSOCIATION: ( YfbR ) or ( SurE ) or ( YjjG ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.3.5
type: Reaction
product: 928074
kinetic law: 928099
reversible: false
name: R_5__nucleotidase__dUMP_

771339
value: 0.0
type: LocalParameter

296238
product: 876530
reactant: 876505
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) PROTEIN_ASSOCIATION: ( FadB ) or ( FadJ ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.35
product: 876542
name: R_3_hydroxyacyl_CoA_dehydrogenase__3_oxohexanoyl_CoA_
reactant: 876517
product: 876554
type: Reaction
fast: false
reversible: false
kinetic law: 876566

875124
value: 0.0
type: LocalParameter

867430
value: -0.003009
type: LocalParameter

313777
product: 999930
fast: false
product: 999942
name: R_uracil_transport_in_via_proton_symport__reversible__periplasm_
kinetic law: 999954
notes: GENE_ASSOCIATION: b1006 PROTEIN_ASSOCIATION: YcdG SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
reactant: 999918
reactant: 999906
reversible: true
type: Reaction

754777
units: 716537
value: 0.0
type: LocalParameter

956743
units: 716537
value: 0.0
type: LocalParameter

279700
reversible: true
reactant: 774445
name: R_crotonobetainyl_CoA_carnitine_CoA_transferase
kinetic law: 774481
notes: GENE_ASSOCIATION: b0038 PROTEIN_ASSOCIATION: CaiB SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS:
product: 774469
fast: false
type: Reaction
product: 774457
reactant: 774433

886347
units: 716537
value: 0.0
type: LocalParameter

303478
reactant: 928172
notes: GENE_ASSOCIATION: b2744 PROTEIN_ASSOCIATION: SurE SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.3.5
product: 928208
product: 928196
name: R_5__nucleotidase__XMP_
type: Reaction
reversible: false
kinetic law: 928220
reactant: 928184
fast: false

945652
units: 716537
value: 0.0
type: LocalParameter

928365
units: 716537
value: 999999.0
type: LocalParameter

725832
value: 0.0
type: LocalParameter

237524
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_3_Oxooctadecanoyl_CoA_C39H64N7O18P3S
type: Species

994812
stoichiometry: 1.0
species: 258062
type: SpeciesReference

002698
units: 716537
value: -999999.0
type: LocalParameter

789219
stoichiometry: 1.0
species: 257162
type: SpeciesReference

916058
units: 716537
value: 0.0
type: LocalParameter

844392
units: 716537
value: 0.0
type: LocalParameter

853462
stoichiometry: 1.0
species: 256002
type: SpeciesReference

967638
units: 716537
value: 0.0
type: LocalParameter

847385
stoichiometry: 1.0
species: 247983
type: SpeciesReference

738314
stoichiometry: 1.0
species: 247043
type: SpeciesReference

952218
stoichiometry: 1.0
species: 259141
type: SpeciesReference

259341
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Proline_C5H9NO2
type: Species

791290
stoichiometry: 1.0
species: 252782
type: SpeciesReference

721964
stoichiometry: 1.0
species: 235234
type: SpeciesReference

933030
units: 716537
value: 999999.0
type: LocalParameter

243583
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_coprogen_C35H52N6O13Fe
type: Species

793964
units: 716537
value: 0.0
type: LocalParameter

777738
units: 716537
value: 0.0
type: LocalParameter

303017
kinetic law: 924238
product: 924226
reactant: 924214
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_ammonia_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

248023
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2__Formamido__N1__5_phospho_D_ribosyl_acetamidine_C8H15N3O8P
type: Species

958344
units: 716537
value: 0.0
type: LocalParameter

309977
kinetic law: 971831
reactant: 971771
product: 971807
reversible: false
reactant: 971783
product: 971819
product: 971795
type: Reaction
fast: false
notes: GENE_ASSOCIATION: b1662 PROTEIN_ASSOCIATION: RibCec SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 2.5.1.9
name: R_riboflavin_synthase

916672
value: 0.0
type: LocalParameter

880871
stoichiometry: 1.0
species: 251762
type: SpeciesReference

786255
value: 0.0
type: LocalParameter

976898
stoichiometry: 1.0
species: 238823
type: SpeciesReference

722918
stoichiometry: 1.0
species: 240703
type: SpeciesReference

997132
units: 716537
value: 0.0
type: LocalParameter

768247
units: 716537
value: 0.0
type: LocalParameter

850902
units: 716537
value: 999999.0
type: LocalParameter

303018
kinetic law: 924336
product: 924324
reactant: 924312
notes: GENE_ASSOCIATION: ( s0001 or b0451 ) PROTEIN_ASSOCIATION: ( SPONTANEOUS ) or ( AmtB ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
fast: false
reversible: true
name: R_ammonia_reversible_transport__periplasm_
type: Reaction

977175
units: 716537
value: 0.0
type: LocalParameter

268361
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_4_hydroxy_5_methyl_3_2H__furanone_C5H6O3
type: Species

876749
units: 716537
value: 0.0
type: LocalParameter

920796
units: 716537
value: 999999.0
type: LocalParameter

866937
stoichiometry: 1.0
species: 251342
type: SpeciesReference

955378
units: 716537
value: 0.0
type: LocalParameter

242823
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Choline_C5H14NO
type: Species

746818
value: 0.0
type: LocalParameter

731566
units: 716537
value: 0.0
type: LocalParameter

941954
value: 0.0
type: LocalParameter

285939
kinetic law: 813256
product: 813244
reactant: 813232
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_ethanesulfonate_exchange
type: Reaction

957649
units: 716537
value: 999999.0
type: LocalParameter

293938
reactant: 861798
reversible: false
kinetic law: 861847
product: 861822
product: 861834
notes: GENE_ASSOCIATION: ( ( b2417 and b1101 and b2415 and b2416 ) or ( b1817 and b1818 and b1819 and b2415 and b2416 ) or ( b2417 and b1621 and b2415 and b2416 ) ) PROTEIN_ASSOCIATION: ( Crr and PtsG and PtsH and PtsI ) or ( ManX and ManY and ManZ and PtsH and PtsI ) or ( Crr and MalX and PtsH and PtsI ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
reactant: 861810
type: Reaction
fast: false
name: R_D_glucose_transport_via_PEPPyr_PTS__periplasm_

842958
stoichiometry: 2.0
species: 251342
type: SpeciesReference

851879
units: 716537
value: 0.0
type: LocalParameter

249522
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Glucose_C6H12O6
type: Species

986240
stoichiometry: 1.0
species: 261601
type: SpeciesReference

986468
stoichiometry: 1.0
species: 250082
type: SpeciesReference

977827
value: 0.0
type: LocalParameter

951609
value: 0.0
type: LocalParameter

789050
value: 0.0
type: LocalParameter

829663
units: 716537
value: 0.0
type: LocalParameter

808838
value: 0.0
type: LocalParameter

833487
units: 716537
value: 999999.0
type: LocalParameter

962978
units: 716537
value: 999999.0
type: LocalParameter

827719
value: 0.0
type: LocalParameter

843260
units: 716537
value: 999999.0
type: LocalParameter

782841
units: 716537
value: 999999.0
type: LocalParameter

942475
stoichiometry: 1.0
species: 251222
type: SpeciesReference

797889
stoichiometry: 1.0
species: 255982
type: SpeciesReference

234354
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_2__3__Cyclic_UMP_C9H10N2O8P
type: Species

289499
kinetic law: 830486
product: 830474
reactant: 830462
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Tyrosine_exchange
type: Reaction

801533
stoichiometry: 1.0
species: 238303
type: SpeciesReference

752955
stoichiometry: 1.0
species: 251342
type: SpeciesReference

752263
units: 716537
value: 0.0
type: LocalParameter

950232
value: -0.007022
type: LocalParameter

238263
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_6_phospho_D_glucono_1_5_lactone_C6H9O9P
type: Species

941747
stoichiometry: 1.0
species: 251222
type: SpeciesReference

272120
reactant: 727132
name: R_3_oxoacyl_acyl_carrier_protein_reductase__n_C160_
fast: false
product: 727181
reactant: 727145
notes: GENE_ASSOCIATION: b1093 PROTEIN_ASSOCIATION: FabG SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.1.1.100
reactant: 727157
type: Reaction
reversible: true
kinetic law: 727193
product: 727169

971631
stoichiometry: 1.0
species: 241883
type: SpeciesReference

762694
stoichiometry: 1.0
species: 240163
type: SpeciesReference

002408
value: 0.0
type: LocalParameter

950814
value: 0.0
type: LocalParameter

992408
stoichiometry: 1.0
species: 262781
type: SpeciesReference

936129
stoichiometry: 1.0
species: 256942
type: SpeciesReference

989483
stoichiometry: 1.0
species: 246363
type: SpeciesReference

263841
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
type: Species

869527
units: 716537
value: 0.0
type: LocalParameter

281899
product: 791170
product: 791194
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS:
reactant: 791134
fast: false
product: 791146
product: 791182
name: R_2_3_diketo_5_methylthio_1_phosphopentane_degradation_reaction
type: Reaction
reactant: 791122
reactant: 791110
reversible: false
product: 791158
kinetic law: 791206

295018
product: 869045
reactant: 869008
fast: false
name: R_glycine_transport_in_via_proton_symport__periplasm_
notes: GENE_ASSOCIATION: ( b4208 or b1801 ) PROTEIN_ASSOCIATION: ( CycAec ) or ( YeaV ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
product: 869033
kinetic law: 869057
type: Reaction
reactant: 869021
reversible: false

963495
units: 716537
value: 0.069795
type: LocalParameter

907896
stoichiometry: 1.0
species: 254402
type: SpeciesReference

284559
kinetic law: 806577
product: 806565
reactant: 806553
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_O_Acetyl_L_serine_exchange
type: Reaction

747572
stoichiometry: 1.0
species: 240343
type: SpeciesReference

945114
stoichiometry: 1.0
species: 257602
type: SpeciesReference

843698
stoichiometry: 1.0
species: 247563
type: SpeciesReference

807009
units: 716537
value: 0.0
type: LocalParameter

866513
units: 716537
value: 0.0
type: LocalParameter

870896
units: 716537
value: 0.0
type: LocalParameter

003956
units: 716537
value: 999999.0
type: LocalParameter

886371
stoichiometry: 1.0
species: 241883
type: SpeciesReference

970990
units: 716537
value: 999999.0
type: LocalParameter

981924
stoichiometry: 1.0
species: 241883
type: SpeciesReference

289299
kinetic law: 829519
product: 829507
reactant: 829495
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Thymidine_exchange
type: Reaction

998530
value: 0.0
type: LocalParameter

980995
stoichiometry: 1.0
species: 260821
type: SpeciesReference

258162
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Phosphatidylglycerol__ditetradec_7_enoyl__n_C141__C34H62O10P1
type: Species

803749
stoichiometry: 1.0
species: 264901
type: SpeciesReference

759637
stoichiometry: 1.0
species: 258902
type: SpeciesReference

970266
value: 0.0
type: LocalParameter

834270
units: 716537
value: 0.0
type: LocalParameter

795400
stoichiometry: 1.0
species: 246463
type: SpeciesReference

725881
stoichiometry: 1.0
species: 239803
type: SpeciesReference

813377
units: 716537
value: 999999.0
type: LocalParameter

842741
value: 0.0
type: LocalParameter

233614
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_1_5_Diaminopentane_C5H16N2
type: Species

880267
value: 0.0
type: LocalParameter

846732
stoichiometry: 1.0
species: 233074
type: SpeciesReference

892428
units: 716537
value: 999999.0
type: LocalParameter

912376
stoichiometry: 1.0
species: 254822
type: SpeciesReference

717608
units: 716537
value: 999999.0
type: LocalParameter

977380
stoichiometry: 1.0
species: 241883
type: SpeciesReference

302418
kinetic law: 916950
product: 916938
reactant: 916926
notes: GENE_ASSOCIATION: b2917 PROTEIN_ASSOCIATION: Sbm SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 5.4.99.2
fast: false
reversible: false
name: R_Methylmalonyl_CoA_mutase
type: Reaction

980545
value: -0.006018
type: LocalParameter

717025
units: 716537
value: 999999.0
type: LocalParameter

972531
stoichiometry: 1.0
species: 251442
type: SpeciesReference

988362
stoichiometry: 1.0
species: 248363
type: SpeciesReference

772171
stoichiometry: 1.0
species: 251342
type: SpeciesReference

726100
stoichiometry: 1.0
species: 236494
type: SpeciesReference

303437
kinetic law: 927869
product: 927857
reactant: 927845
notes: GENE_ASSOCIATION: s0001 PROTEIN_ASSOCIATION: SPONTANEOUS SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
fast: false
reversible: true
name: R_NO_transport__diffusion_
type: Reaction

296278
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) PROTEIN_ASSOCIATION: ( FadB ) or ( FadJ ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.35
reversible: false
reactant: 876785
fast: false
product: 876822
product: 876810
kinetic law: 876835
name: R_3_hydroxyacyl_CoA_dehydrogenase__3_oxodecanoyl_CoA_
product: 876797
reactant: 876773
type: Reaction

903974
units: 716537
value: 999999.0
type: LocalParameter

720028
units: 716537
value: 999999.0
type: LocalParameter

967688
stoichiometry: 1.0
species: 239563
type: SpeciesReference

718860
units: 716537
value: 0.0
type: LocalParameter

985082
value: 0.0
type: LocalParameter

294358
reactant: 864917
name: R_L_glutamate_transport_via_proton_symport__reversible__periplasm_
kinetic law: 864967
notes: GENE_ASSOCIATION: b4077 PROTEIN_ASSOCIATION: GltP SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
reversible: true
reactant: 864929
type: Reaction
product: 864942
product: 864954
fast: false

959065
units: 716537
value: 0.0
type: LocalParameter

984601
units: 716537
value: 0.0
type: LocalParameter

817272
units: 716537
value: 0.0
type: LocalParameter

814095
value: 0.0
type: LocalParameter

956972
units: 716537
value: 0.0
type: LocalParameter

947212
units: 716537
value: 999999.0
type: LocalParameter

242943
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Citrate_C6H5O7
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816717
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reactant: 849077
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841143
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kinetic law: 882663
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907268
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000804
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790449
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886854
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885609
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type: SpeciesReference

796914
value: -0.001003
type: LocalParameter

729744
stoichiometry: 1.0
species: 258902
type: SpeciesReference

722482
stoichiometry: 1.0
species: 240703
type: SpeciesReference

907256
units: 716537
value: 999999.0
type: LocalParameter

807845
units: 716537
value: 0.0
type: LocalParameter

728992
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species: 238303
type: SpeciesReference

253862
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Malate_C4H4O5
type: Species

865003
value: 0.0
type: LocalParameter

896121
stoichiometry: 1.0
species: 250342
type: SpeciesReference

911290
value: 0.0
type: LocalParameter

748965
stoichiometry: 1.0
species: 240283
type: SpeciesReference

837851
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type: LocalParameter

962507
stoichiometry: 1.0
species: 251262
type: SpeciesReference

764758
units: 716537
value: 0.0
type: LocalParameter

992843
stoichiometry: 1.0
species: 262921
type: SpeciesReference

972977
stoichiometry: 1.0
species: 260041
type: SpeciesReference

312117
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name: R_thioldisulfide_reductase__DsbC_
reversible: false
kinetic law: 985046
product: 985034
reactant: 985010
reactant: 984997
type: Reaction
product: 985022
notes: GENE_ASSOCIATION: ( b2893 and b4136 ) PROTEIN_ASSOCIATION: ( DsbC and DsbD ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:

841844
value: 0.0
type: LocalParameter

732932
stoichiometry: 1.0
species: 251342
type: SpeciesReference

297238
name: R_Hydroxypyruvate_reductase__NADPH_
reactant: 882736
reactant: 882748
type: Reaction
product: 882786
fast: false
kinetic law: 882799
reversible: false
notes: GENE_ASSOCIATION: ( b3553 or b1033 ) PROTEIN_ASSOCIATION: ( YiaE ) or ( YcdW ) SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
product: 882773
reactant: 882761

738707
stoichiometry: 1.0
species: 257002
type: SpeciesReference

956767
stoichiometry: 1.0
species: 251262
type: SpeciesReference

914981
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type: LocalParameter

945676
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species: 241883
type: SpeciesReference

893813
units: 716537
value: 999999.0
type: LocalParameter

939580
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species: 257302
type: SpeciesReference

865295
stoichiometry: 1.0
species: 243283
type: SpeciesReference

925644
units: 716537
value: 0.0
type: LocalParameter

928389
units: 716537
value: 0.0
type: LocalParameter

980338
stoichiometry: 1.0
species: 251342
type: SpeciesReference

994836
stoichiometry: 1.0
species: 258902
type: SpeciesReference

754753
units: 716537
value: 999999.0
type: LocalParameter

730177
stoichiometry: 1.0
species: 237824
type: SpeciesReference

852047
value: -0.004012
type: LocalParameter

875148
value: 0.0
type: LocalParameter

929579
value: 0.0
type: LocalParameter

876980
units: 716537
value: 0.0
type: LocalParameter

843478
stoichiometry: 1.0
species: 247543
type: SpeciesReference

246523
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_deoxy_D_xylulose_C5H10O4
type: Species

734676
units: 716537
value: 0.0
type: LocalParameter

255602
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
type: Species

921098
value: 0.0
type: LocalParameter

313796
kinetic law: 000051
product: 000039
reactant: 000027
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_uracil_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

983941
stoichiometry: 1.0
species: 261361
type: SpeciesReference

753160
stoichiometry: 1.0
species: 235634
type: SpeciesReference

937370
stoichiometry: 1.0
species: 236035
type: SpeciesReference

898220
stoichiometry: 1.0
species: 236254
type: SpeciesReference

784974
stoichiometry: 1.0
species: 241883
type: SpeciesReference

859585
stoichiometry: 1.0
species: 241963
type: SpeciesReference

762401
stoichiometry: 1.0
species: 241883
type: SpeciesReference

806601
units: 716537
value: 999999.0
type: LocalParameter

834864
stoichiometry: 1.0
species: 251222
type: SpeciesReference

973461
stoichiometry: 1.0
species: 251222
type: SpeciesReference

249962
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Glutamate_C5H8NO4
type: Species

264641
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_D_Xylose_C5H10O5
type: Species

290659
kinetic law: 838455
product: 838443
reactant: 838431
notes: GENE_ASSOCIATION: b2802 PROTEIN_ASSOCIATION: FucI SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 5.3.1.25
fast: false
reversible: true
name: R_L_fucose_isomerase
type: Reaction

263141
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_undecaprenyl_phosphate_4_amino_4_formyl_L_arabinose_C61H99N1O8P1
type: Species

776633
stoichiometry: 1.0
species: 249802
type: SpeciesReference

895275
units: 716537
value: 0.014329
type: LocalParameter

880859
stoichiometry: 1.0
species: 251342
type: SpeciesReference

818217
units: 716537
value: 999999.0
type: LocalParameter

769756
value: 0.0
type: LocalParameter

753389
units: 716537
value: 0.0
type: LocalParameter

935168
stoichiometry: 1.0
species: 263541
type: SpeciesReference

933247
stoichiometry: 1.0
species: 252542
type: SpeciesReference

307137
name: R_Phospholipase_A1__phosphatidylethanolamine__n_C120___periplasm_
product: 953880
product: 953868
fast: false
reactant: 953844
product: 953892
reactant: 953856
type: Reaction
reversible: false
kinetic law: 953904
notes: GENE_ASSOCIATION: b3821 PROTEIN_ASSOCIATION: PldA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.32

987806
stoichiometry: 1.0
species: 261841
type: SpeciesReference

846307
units: 716537
value: 0.0
type: LocalParameter

718848
value: 0.0
type: LocalParameter

746830
stoichiometry: 1.0
species: 233074
type: SpeciesReference

756117
stoichiometry: 1.0
species: 251382
type: SpeciesReference

812859
stoichiometry: 1.0
species: 266841
type: SpeciesReference

936552
stoichiometry: 1.0
species: 236014
type: SpeciesReference

313797
product: 000147
product: 000172
reactant: 000123
reversible: false
kinetic law: 000184
type: Reaction
fast: false
reactant: 000135
product: 000160
name: R_ureidoglycolate_dehydrogenase
notes: GENE_ASSOCIATION: b0517 PROTEIN_ASSOCIATION: AllD SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 1.1.1.154

298478
product: 890423
reactant: 890411
kinetic law: 890447
product: 890435
reactant: 890399
fast: false
reversible: false
notes: GENE_ASSOCIATION: ( b2342 or b3845 ) PROTEIN_ASSOCIATION: ( FadI ) or ( FadA ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.16
name: R_3_ketoacyl_CoA_thiolase
type: Reaction

779694
units: 716537
value: 999999.0
type: LocalParameter

951200
units: 716537
value: 999999.0
type: LocalParameter

828952
units: 716537
value: 0.0
type: LocalParameter

887313
units: 716537
value: 0.0
type: LocalParameter

004775
stoichiometry: 1.0
species: 264781
type: SpeciesReference

989046
stoichiometry: 1.0
species: 262021
type: SpeciesReference

837102
units: 716537
value: 999999.0
type: LocalParameter

303457
kinetic law: 927977
product: 927965
product: 927953
reactant: 927941
notes: GENE_ASSOCIATION: b2262 PROTEIN_ASSOCIATION: MenB SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 4.1.3.36
fast: false
reversible: false
name: R_naphthoate_synthase
type: Reaction

993674
units: 716537
value: 0.0
type: LocalParameter

972748
units: 716537
value: 0.0
type: LocalParameter

785901
value: 0.0
type: LocalParameter

244103
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Hydrogen_cyanide_CHN
type: Species

720644
stoichiometry: 1.0
species: 240703
type: SpeciesReference

776084
value: 0.0
type: LocalParameter

879096
value: 0.0
type: LocalParameter

865827
units: 716537
value: 0.0
type: LocalParameter

902734
stoichiometry: 1.0
species: 233574
type: SpeciesReference

775264
stoichiometry: 1.0
species: 243763
type: SpeciesReference

764601
stoichiometry: 1.0
species: 253642
type: SpeciesReference

950670
units: 716537
value: 0.0
type: LocalParameter

303697
kinetic law: 929906
type: Reaction
reactant: 929870
reactant: 929858
notes: GENE_ASSOCIATION: ( b0480 or b4055 ) PROTEIN_ASSOCIATION: ( UshA ) or ( AphA ) SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS: 3.1.3.5
product: 929882
name: R_5__nucleotidase__dTMP_
reversible: false
fast: false
product: 929894

290219
kinetic law: 835321
type: Reaction
product: 835309
reversible: false
notes: GENE_ASSOCIATION: b0452 PROTEIN_ASSOCIATION: TesB SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS:
reactant: 835261
fast: false
product: 835285
reactant: 835273
name: R_fatty_acid_CoA_thioesterase__octadecanoate_
product: 835297

741793
value: 0.0
type: LocalParameter

864057
units: 716537
value: 0.0
type: LocalParameter

272800
product: 731627
notes: GENE_ASSOCIATION: ( b2836 and b1094 ) PROTEIN_ASSOCIATION: ( Aas and AcpP ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 6.2.1.20
reversible: false
reactant: 731602
fast: false
type: Reaction
name: R_acyl_acyl_carrier_protein_synthetase___n_C141_
reactant: 731590
product: 731639
product: 731651
reactant: 731615
kinetic law: 731663

945349
stoichiometry: 1.0
species: 257042
type: SpeciesReference

949500
value: -0.007022
type: LocalParameter

793421
stoichiometry: 1.0
species: 251342
type: SpeciesReference

265341
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Acetoacetate_C4H5O3
type: Species

751023
units: 716537
value: -999999.0
type: LocalParameter

789606
stoichiometry: 1.0
species: 256042
type: SpeciesReference

874071
stoichiometry: 1.0
species: 234634
type: SpeciesReference

902042
stoichiometry: 1.0
species: 235134
type: SpeciesReference

886842
value: 0.0
type: LocalParameter

957104
units: 716537
value: 0.0
type: LocalParameter

812421
value: 0.0
type: LocalParameter

258962
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Pimeloyl_CoA_C28H41N7O19P3S
type: Species

988508
stoichiometry: 1.0
species: 261921
type: SpeciesReference

799305
value: -0.001003
type: LocalParameter

744668
value: -0.038117
type: LocalParameter

743423
units: 716537
value: 0.219692
type: LocalParameter

854812
value: 0.0
type: LocalParameter

794362
stoichiometry: 1.0
species: 260281
type: SpeciesReference

272100
reversible: false
name: R_3_oxoacyl_acyl_carrier_protein_reductase__n_C141_
type: Reaction
reactant: 727010
product: 727035
product: 727047
notes: GENE_ASSOCIATION: b1093 PROTEIN_ASSOCIATION: FabG SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.1.1.100
kinetic law: 727059
reactant: 726997
fast: false
reactant: 727022

725180
units: 716537
value: 0.0
type: LocalParameter

988097
stoichiometry: 1.0
species: 251342
type: SpeciesReference

782829
units: 716537
value: 0.0
type: LocalParameter

742908
value: 0.0
type: LocalParameter

742217
stoichiometry: 1.0
species: 251342
type: SpeciesReference

285799
kinetic law: 812580
product: 812568
reactant: 812556
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_dTMP_exchange
type: Reaction

885476
units: 716537
value: 0.0
type: LocalParameter

935918
stoichiometry: 1.0
species: 256802
type: SpeciesReference

937928
units: 716537
value: 999999.0
type: LocalParameter

876517
stoichiometry: 1.0
species: 255942
type: SpeciesReference

780176
units: 716537
value: 999999.0
type: LocalParameter

721758
value: 0.0
type: LocalParameter

979921
stoichiometry: 1.0
species: 260701
type: SpeciesReference

829458
value: 0.0
type: LocalParameter

982540
stoichiometry: 5.0
species: 251342
type: SpeciesReference

793759
stoichiometry: 1.0
species: 245943
type: SpeciesReference

803304
units: 716537
value: 999999.0
type: LocalParameter

839365
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species: 255342
type: SpeciesReference

737855
stoichiometry: 1.0
species: 247063
type: SpeciesReference

831150
stoichiometry: 1.0
species: 270201
type: SpeciesReference

751705
value: 0.0
type: LocalParameter

917903
stoichiometry: 1.0
species: 243003
type: SpeciesReference

759204
stoichiometry: 1.0
species: 241883
type: SpeciesReference

717476
stoichiometry: 1.0
species: 233474
type: SpeciesReference

273460
product: 735752
reactant: 735716
product: 735728
fast: false
type: Reaction
reversible: false
reactant: 735704
product: 735740
name: R_N_acetylglucosamine_kinase
kinetic law: 735764
notes: GENE_ASSOCIATION: b1119 PROTEIN_ASSOCIATION: NagK SUBSYSTEM: S_Murein_Recycling PROTEIN_CLASS: 2.7.1.59

241443
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Arginine_C6H15N4O2
type: Species

943046
stoichiometry: 1.0
species: 260583
type: SpeciesReference

981719
stoichiometry: 1.0
species: 259781
type: SpeciesReference

961734
stoichiometry: 1.5
species: 256562
type: SpeciesReference

768478
stoichiometry: 1.0
species: 258902
type: SpeciesReference

293958
notes: GENE_ASSOCIATION: b2943 PROTEIN_ASSOCIATION: GalP SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
reversible: false
type: Reaction
reactant: 861919
product: 861943
name: R_D_glucose_transport_in_via_proton_symport__periplasm_
product: 861955
kinetic law: 861967
reactant: 861931
fast: false

980765
units: 716537
value: 0.0
type: LocalParameter

860770
value: 0.0
type: LocalParameter

845083
stoichiometry: 1.0
species: 247923
type: SpeciesReference

821644
value: -0.191588
type: LocalParameter

800031
value: 0.0
type: LocalParameter

881546
units: 716537
value: 3.29E-4
type: LocalParameter

279980
product: 776229
type: Reaction
reversible: false
product: 776253
reactant: 776193
reactant: 776217
name: R_Crotonobetaine_CoA_Ligase
kinetic law: 776265
fast: false
reactant: 776205
product: 776241
notes: GENE_ASSOCIATION: b0037 PROTEIN_ASSOCIATION: CaiC SUBSYSTEM: S_Oxidative_Phosphorylation PROTEIN_CLASS:

855186
stoichiometry: 1.0
species: 248802
type: SpeciesReference

254442
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Mannonate_C6H11O7
type: Species

955390
units: 716537
value: 999999.0
type: LocalParameter

865610
stoichiometry: 1.0
species: 243343
type: SpeciesReference

311317
reactant: 980041
product: 980077
notes: GENE_ASSOCIATION: ( ( b1126 and b1125 and b1124 and b1123 ) or ( b1440 and b1441 and b1442 and b1443 ) ) PROTEIN_ASSOCIATION: ( PotA and PotB and PotC and PotDec ) or ( YdcS and YdcT and YdcU and YdcV ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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product: 980101
product: 980089
kinetic law: 980125
reactant: 980053
product: 980113
reversible: false
name: R_spermidine_transport_via_ABC_system__periplasm_
fast: false
reactant: 980065

807239
stoichiometry: 1.0
species: 265681
type: SpeciesReference

864457
value: -0.004012
type: LocalParameter

770989
value: 0.0
type: LocalParameter

981177
units: 716537
value: 999999.0
type: LocalParameter

975660
stoichiometry: 1.0
species: 259141
type: SpeciesReference

244323
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Cysteinyl_tRNA_Cys__C3H6NOSR
type: Species

954644
stoichiometry: 1.0
species: 251262
type: SpeciesReference

302857
product: 922241
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
kinetic law: 922265
name: R_NADP_phosphatase
reactant: 922229
reversible: false
product: 922253
reactant: 922217
type: Reaction
fast: false

002638
units: 716537
value: 0.0
type: LocalParameter

744052
units: 716537
value: 0.0
type: LocalParameter

927953
stoichiometry: 1.0
species: 243343
type: SpeciesReference

778974
units: 716537
value: 0.0
type: LocalParameter

868591
value: 0.0
type: LocalParameter

739627
units: 716537
value: -999999.0
type: LocalParameter

717620
value: 0.0
type: LocalParameter

896338
units: 716537
value: 0.0
type: LocalParameter

942244
stoichiometry: 1.0
species: 257462
type: SpeciesReference

900266
stoichiometry: 1.0
species: 248443
type: SpeciesReference

789496
units: 716537
value: 0.0
type: LocalParameter

248722
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Galactarate_C6H8O8
type: Species

798143
stoichiometry: 1.0
species: 261181
type: SpeciesReference

761075
value: 0.0
type: LocalParameter

302858
reactant: 922361
notes: GENE_ASSOCIATION: b1740 PROTEIN_ASSOCIATION: NadEec SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 6.3.1.5
reactant: 922349
fast: false
kinetic law: 922421
product: 922397
product: 922385
reactant: 922337
product: 922409
type: Reaction
product: 922373
name: R_NAD_synthase__nh3_
reversible: false

989252
stoichiometry: 1.0
species: 239803
type: SpeciesReference

800248
units: 716537
value: 999999.0
type: LocalParameter

306557
type: Reaction
name: R_phosphatidylglycerol_phosphate_phosphatase__n_C161_
reactant: 950124
kinetic law: 950172
reactant: 950136
fast: false
reversible: false
product: 950148
product: 950160
notes: GENE_ASSOCIATION: ( b0418 or b1278 ) PROTEIN_ASSOCIATION: ( PgpA ) or ( PgpB ) SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.3.27

890134
units: 716537
value: 0.0
type: LocalParameter

286059
kinetic law: 813835
product: 813823
reactant: 813811
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Fe_III_dicitrate_exchange
type: Reaction

824742
value: 0.0
type: LocalParameter

936104
value: 0.0
type: LocalParameter

296298
reactant: 876907
reversible: false
fast: false
reactant: 876919
kinetic law: 876968
product: 876944
product: 876956
product: 876931
name: R_3_hydroxyacyl_CoA_dehydrogenase__3_oxododecanoyl_CoA_
notes: GENE_ASSOCIATION: ( b3846 or b2341 ) PROTEIN_ASSOCIATION: ( FadB ) or ( FadJ ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.1.1.35
type: Reaction

752979
units: 716537
value: 0.0
type: LocalParameter

770712
stoichiometry: 1.0
species: 243103
type: SpeciesReference

987395
value: 0.0
type: LocalParameter

876323
units: 716537
value: 999999.0
type: LocalParameter

782865
units: 716537
value: 0.0
type: LocalParameter

867490
stoichiometry: 1.0
species: 255982
type: SpeciesReference

758493
stoichiometry: 1.0
species: 251222
type: SpeciesReference

294378
fast: false
name: R_Naglutamate_symport__periplasm_
type: Reaction
reactant: 865040
product: 865077
reactant: 865052
product: 865064
reversible: false
kinetic law: 865089
notes: GENE_ASSOCIATION: b3653 PROTEIN_ASSOCIATION: GltS SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:

942499
stoichiometry: 1.0
species: 233334
type: SpeciesReference

788698
stoichiometry: 1.0
species: 245303
type: SpeciesReference

941723
units: 716537
value: 0.0
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950256
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species: 258542
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732908
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species: 263941
type: SpeciesReference

943084
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value: 999999.0
type: LocalParameter

999507
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type: LocalParameter

804427
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species: 265041
type: SpeciesReference

248003
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
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type: Species

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
type: Species

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value: 999999.0
type: LocalParameter

739663
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value: -0.217916
type: LocalParameter

757383
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species: 251342
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309737
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product: 970326
type: Reaction
name: R_pyrimidine_nucleoside_phosphorylase__uracil_
reactant: 970314
kinetic law: 970350
product: 970338
reactant: 970302

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value: -999999.0
type: LocalParameter

905615
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type: LocalParameter

998554
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979717
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value: 0.0
type: LocalParameter

285959
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product: 813341
reactant: 813329
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_Ethanol_exchange
type: Reaction

846756
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species: 247903
type: SpeciesReference

268341
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Histidine_C6H9N3O2
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value: 999999.0
type: LocalParameter

934421
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species: 263422
type: SpeciesReference

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species: 250402
type: SpeciesReference

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species: 260841
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751733
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species: 251342
type: SpeciesReference

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276000
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reactant: 751096
product: 751144
product: 751132
reversible: false
reactant: 751108
reactant: 751084
product: 751157
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product: 751120

721733
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865863
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species: 251382
type: SpeciesReference

967663
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species: 238823
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type: Reaction
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reactant: 733233
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kinetic law: 733269
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reversible: false
reactant: 733221
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886396
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species: 252482
type: SpeciesReference

902770
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value: 0.0
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834294
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value: -999999.0
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946839
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species: 258902
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861385
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894623
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793988
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species: 245963
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798567
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species: 256982
type: SpeciesReference

234374
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
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882492
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value: 999999.0
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003385
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species: 259141
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295038
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notes: GENE_ASSOCIATION: b0007 PROTEIN_ASSOCIATION: YaaJ SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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reactant: 869129
type: Reaction
fast: false
reversible: false
product: 869165
reactant: 869141
kinetic law: 869177

777713
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species: 261341
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785717
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species: 244883
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species: 241424
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reactant: 790977
product: 790990
product: 791002
reactant: 790964
reactant: 790951
product: 791014
reversible: false
fast: false
type: Reaction
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS:
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312577
kinetic law: 987818
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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product: 987806
reactant: 987782
product: 987794
fast: false
type: Reaction
reversible: false
name: R_thymine_transport_out_via_proton_antiport__periplasm_

890785
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species: 238823
type: SpeciesReference

238243
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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916696
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species: 251222
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species: 251222
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
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species: 247603
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812153
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species: 259641
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species: 260421
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species: 258902
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species: 259781
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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species: 262001
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value: 999999.0
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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928184
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species: 264421
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851215
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species: 234074
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species: 246823
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940777
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species: 259141
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298438
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reactant: 890170
product: 890194
type: Reaction
reactant: 890158
kinetic law: 890206
reversible: false

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value: 0.0
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783696
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species: 233594
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789038
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value: 4.93E-4
type: LocalParameter

776671
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species: 239803
type: SpeciesReference

303417
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name: R_nitric_oxide_dioxygenase
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notes: GENE_ASSOCIATION: b2552 PROTEIN_ASSOCIATION: HmpA SUBSYSTEM: S_Nitrogen_Metabolism PROTEIN_CLASS: 1.14.12.17
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kinetic law: 927676
reversible: false
reactant: 927628
reactant: 927603
fast: false
type: Reaction
product: 927652

887543
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738000
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value: -999999.0
type: LocalParameter

885622
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753135
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value: 0.0
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
in compartment: 233034
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value: 999999.0
type: LocalParameter

868179
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species: 235634
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760845
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species: 240103
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730756
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303418
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reactant: 927749
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
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992638
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species: 251342
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769961
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species: 257362
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_D_Glucose_exchange
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872364
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species: 250762
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species: 258942
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initial concentration: NaN
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species: 254642
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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903576
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species: 253762
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734423
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species: 238763
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924250
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855608
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744692
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species: 256042
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initial concentration: NaN
initial amount: NaN
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832097
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759867
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species: 243283
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species: 237664
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initial amount: NaN
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value: 999999.0
type: LocalParameter

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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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species: 259482
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value: 0.055407
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904215
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972784
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788082
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897304
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808850
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827731
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816135
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species: 248702
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species: 256662
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960224
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859548
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768016
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species: 240643
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species: 244383
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743870
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933283
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290919
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fast: false
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product: 840332
kinetic law: 840356
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reactant: 840320
notes: GENE_ASSOCIATION: b3915 PROTEIN_ASSOCIATION: FieF SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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275800
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notes: GENE_ASSOCIATION: b3588 PROTEIN_ASSOCIATION: AldB SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 1.2.1.4
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fast: false
reversible: false
kinetic law: 749907
product: 749869
reactant: 749832
reactant: 749844
product: 749882
type: Reaction
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963218
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984625
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species: 246183
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935192
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956996
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940986
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004920
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species: 264781
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971231
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796805
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species: 256002
type: SpeciesReference

957661
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277600
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type: Reaction
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product: 761305
reactant: 761269
notes: GENE_ASSOCIATION: b3528 PROTEIN_ASSOCIATION: DctA SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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kinetic law: 761317
reactant: 761281
fast: false

754524
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type: LocalParameter

797180
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type: LocalParameter

263861
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has only substance units: false
initial concentration: NaN
initial amount: NaN
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972556
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284579
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product: 806661
reactant: 806649
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Adenine_exchange
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002420
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value: 0.0
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936708
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species: 236074
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boundary condition: false
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initial amount: NaN
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value: 999999.0
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772364
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species: 243403
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747355
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species: 240143
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779442
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907027
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289279
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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896374
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821608
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767065
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290679
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991258
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value: -0.041874
type: LocalParameter

243363
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initial amount: NaN
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937346
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304857
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product: 938444
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notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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889797
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939084
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759432
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769744
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951237
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963905
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772147
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785938
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004763
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828988
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reversible: false
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982576
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756814
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255402
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reactant: 885256
product: 885268
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product: 846235
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233854
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291618
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reactant: 846089
kinetic law: 846137
product: 846113
name: R_beta_fructofuranosidase
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866525
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302057
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308037
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259521
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812409
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306317
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962942
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843272
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958331
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initial amount: NaN
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reactant: 921976
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301458
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reactant: 926047
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product: 926072
fast: false
product: 926059
reactant: 926023
name: R_nicotinate_nucleotide_adenylyltransferase
reactant: 926035

237784
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type: Reaction
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fast: false
product: 863575
product: 863587
reactant: 863563

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species: 238783
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880292
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initial amount: NaN
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970290
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kinetic law: 863478
product: 863466
product: 863454
product: 863442
reactant: 863406
product: 863430

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reactant: 741347
product: 741359
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816147
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species: 267521
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838394
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type: LocalParameter

266721
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product: 731784
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species: 238383
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308797
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product: 964520
reactant: 964484
kinetic law: 964533
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notes: GENE_ASSOCIATION: b4111 PROTEIN_ASSOCIATION: ProPec SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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307117
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notes: GENE_ASSOCIATION: b3821 PROTEIN_ASSOCIATION: PldA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.32
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kinetic law: 953772
reactant: 953724
reactant: 953736
name: R_Phospholipase_A1__phosphatidate__n_C181___periplasm_
product: 953748
fast: false

859561
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species: 264021
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867901
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963917
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725168
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312137
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reactant: 985118
kinetic law: 985166
reactant: 985130
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product: 985154
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species: 241883
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957805
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898245
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951224
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821837
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847118
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251682
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863502
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309417
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product: 968357
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255622
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807869
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313096
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980212
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species: 260721
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264661
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initial amount: NaN
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991488
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906605
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730153
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841820
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774300
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807688
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242983
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species: 237963
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967894
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989447
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286039
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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name: R_Fe3_exchange
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313097
kinetic law: 992517
product: 992505
reactant: 992493
notes: GENE_ASSOCIATION: b2344 PROTEIN_ASSOCIATION: FadL SUBSYSTEM: S_Transport__Outer_Membrane PROTEIN_CLASS:
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298458
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name: R_3_ketoacyl_CoA_thiolase
product: 890315
kinetic law: 890327
reversible: false
product: 890303
notes: GENE_ASSOCIATION: ( b2342 or b3845 ) PROTEIN_ASSOCIATION: ( FadI ) or ( FadA ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.16

792027
units: 716537
value: 999999.0
type: LocalParameter

991270
value: 0.0
type: LocalParameter

731529
units: 716537
value: 0.0
type: LocalParameter

962106
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type: LocalParameter

996323
stoichiometry: 1.0
species: 263661
type: SpeciesReference

923466
units: 716537
value: 0.294003
type: LocalParameter

763807
units: 716537
value: 0.0
type: LocalParameter

982564
stoichiometry: 1.0
species: 260583
type: SpeciesReference

233574
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_5_Diaminopentane_C5H16N2
type: Species

258722
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Protoheme_C34H30FeN4O4
type: Species

839341
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type: LocalParameter

934217
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type: LocalParameter

737879
units: 716537
value: -999999.0
type: LocalParameter

296818
fast: false
reversible: false
kinetic law: 880230
reactant: 880182
type: Reaction
product: 880218
product: 880206
name: R_mercury__Hg2__transport_out_via_proton_antiport__periplasm_
reactant: 880194
notes: GENE_ASSOCIATION: b3915 PROTEIN_ASSOCIATION: FieF SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:

803328
units: 716537
value: 0.0
type: LocalParameter

265321
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Acetate_C2H3O2
type: Species

717451
value: 0.0
type: LocalParameter

865634
units: 716537
value: -999999.0
type: LocalParameter

961151
units: 716537
value: -999999.0
type: LocalParameter

993220
stoichiometry: 1.0
species: 263041
type: SpeciesReference

881522
units: 716537
value: 999999.0
type: LocalParameter

989581
units: 716537
value: 0.019279
type: LocalParameter

290239
product: 835443
reactant: 835393
product: 835431
product: 835418
reactant: 835405
name: R_fatty_acid_CoA_thioesterase__octadecenoate_
fast: false
notes: GENE_ASSOCIATION: b0452 PROTEIN_ASSOCIATION: TesB SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS:
type: Reaction
kinetic law: 835456
reversible: false

961710
units: 716537
value: 0.129586
type: LocalParameter

831175
units: 716537
value: 0.0
type: LocalParameter

980789
value: 0.0
type: LocalParameter

801761
stoichiometry: 1.0
species: 255722
type: SpeciesReference

756826
units: 716537
value: 0.0
type: LocalParameter

821620
value: 0.0
type: LocalParameter

800055
value: 0.0
type: LocalParameter

936997
units: 716537
value: 999999.0
type: LocalParameter

722290
value: -0.012037
type: LocalParameter

238683
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Acetoacetate_C4H5O3
type: Species

786219
units: 716537
value: 999999.0
type: LocalParameter

819415
value: 0.0
type: LocalParameter

789472
stoichiometry: 1.0
species: 255962
type: SpeciesReference

716635
units: 716537
value: 999999.0
type: LocalParameter

817248
units: 716537
value: 999999.0
type: LocalParameter

998783
units: 716537
value: -999999.0
type: LocalParameter

942269
stoichiometry: 1.0
species: 258902
type: SpeciesReference

295058
kinetic law: 869274
product: 869262
reactant: 869250
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_Glycine_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

968307
stoichiometry: 1.0
species: 259622
type: SpeciesReference

971670
stoichiometry: 1.0
species: 247923
type: SpeciesReference

744076
stoichiometry: 1.0
species: 240763
type: SpeciesReference

725011
stoichiometry: 1.0
species: 262081
type: SpeciesReference

728380
stoichiometry: 1.0
species: 253782
type: SpeciesReference

954620
units: 716537
value: 0.0
type: LocalParameter

870167
stoichiometry: 1.0
species: 250642
type: SpeciesReference

254242
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Maltotetraose_C24H42O21
type: Species

903275
stoichiometry: 1.0
species: 251342
type: SpeciesReference

980351
stoichiometry: 1.0
species: 260701
type: SpeciesReference

295538
name: R_guanosine_kinase
product: 872400
product: 872388
fast: false
type: Reaction
product: 872376
notes: GENE_ASSOCIATION: b0477 PROTEIN_ASSOCIATION: Gsk SUBSYSTEM: S_Nucleotide_Salvage_Pathway PROTEIN_CLASS:
reversible: false
kinetic law: 872417
reactant: 872352
reactant: 872364

916514
stoichiometry: 1.0
species: 243283
type: SpeciesReference

853425
value: 0.0
type: LocalParameter

855620
value: 0.0
type: LocalParameter

720620
stoichiometry: 1.0
species: 241883
type: SpeciesReference

776060
value: 0.0
type: LocalParameter

832796
stoichiometry: 0.003948
species: 260641
type: SpeciesReference

879072
value: 0.0
type: LocalParameter

874096
stoichiometry: 2.0
species: 251342
type: SpeciesReference

950694
value: 0.0
type: LocalParameter

273480
notes: GENE_ASSOCIATION: b3784 PROTEIN_ASSOCIATION: WecA SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS:
reactant: 735849
name: R_UDP_N_acetylglucosamineundecaprenylphosphate_N_acetylglucosamine__1_phosphate_transferase
kinetic law: 735885
product: 735873
reactant: 735837
reversible: false
product: 735861
fast: false
type: Reaction

737347
units: 716537
value: 999999.0
type: LocalParameter

241463
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Arginine_C6H15N4O2
type: Species

895071
stoichiometry: 1.0
species: 253542
type: SpeciesReference

892452
units: 716537
value: 0.0
type: LocalParameter

978332
units: 716537
value: 0.0
type: LocalParameter

843490
stoichiometry: 1.0
species: 251342
type: SpeciesReference

842729
units: 716537
value: 0.005235
type: LocalParameter

766810
value: -0.004012
type: LocalParameter

726683
units: 716537
value: 999999.0
type: LocalParameter

902066
stoichiometry: 1.0
species: 248443
type: SpeciesReference

717899
value: 0.0
type: LocalParameter

949524
stoichiometry: 1.0
species: 258422
type: SpeciesReference

254462
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_2_alpha_D_Mannosyl__D_glycerate_C9H15O9
type: Species

920566
value: 0.0
type: LocalParameter

311337
kinetic law: 980224
product: 980212
reactant: 980200
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_spermidine_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

778950
stoichiometry: 1.0
species: 251342
type: SpeciesReference

259382
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_L_Prolinylglycine_C7H12N2O3
type: Species

895299
stoichiometry: 1.0
species: 233934
type: SpeciesReference

249942
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Glutamate_C5H8NO4
type: Species

293978
kinetic law: 862065
product: 862052
reactant: 862039
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_glucose_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

994160
units: 716537
value: 0.0
type: LocalParameter

743447
stoichiometry: 1.0
species: 234594
type: SpeciesReference

945325
stoichiometry: 1.0
species: 251342
type: SpeciesReference

876114
units: 716537
value: -999999.0
type: LocalParameter

835080
units: 716537
value: 999999.0
type: LocalParameter

794386
stoichiometry: 1.0
species: 251342
type: SpeciesReference

886866
stoichiometry: 1.0
species: 252542
type: SpeciesReference

986493
units: 716537
value: 0.0
type: LocalParameter

768453
stoichiometry: 1.0
species: 242823
type: SpeciesReference

973921
value: 0.0
type: LocalParameter

244303
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Cystathionine_C7H14N2O4S
type: Species

979945
stoichiometry: 1.0
species: 251342
type: SpeciesReference

775433
units: 716537
value: 999999.0
type: LocalParameter

306537
product: 950028
reactant: 950016
type: Reaction
reversible: false
reactant: 950004
product: 950040
kinetic law: 950052
notes: GENE_ASSOCIATION: ( b0418 or b1278 ) PROTEIN_ASSOCIATION: ( PgpA ) or ( PgpB ) SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.3.27
name: R_phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C160_
fast: false

940002
units: 716537
value: 0.0
type: LocalParameter

946609
stoichiometry: 1.0
species: 258222
type: SpeciesReference

747781
units: 716537
value: 0.0
type: LocalParameter

988073
stoichiometry: 1.0
species: 240703
type: SpeciesReference

922617
stoichiometry: 1.0
species: 241883
type: SpeciesReference

780405
stoichiometry: 1.0
species: 256042
type: SpeciesReference

919115
stoichiometry: 1.0
species: 255382
type: SpeciesReference

773140
value: 0.0
type: LocalParameter

886106
stoichiometry: 1.0
species: 240103
type: SpeciesReference

820885
stoichiometry: 1.0
species: 252682
type: SpeciesReference

741008
stoichiometry: 1.0
species: 239623
type: SpeciesReference

915887
units: 716537
value: 0.0
type: LocalParameter

296098
kinetic law: 875786
product: 875774
reactant: 875762
notes: GENE_ASSOCIATION: ( b0875 or s0001 ) PROTEIN_ASSOCIATION: ( AqpZ ) or ( SPONTANEOUS ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
fast: false
reversible: true
name: R_H2O_transport_via_diffusion__periplasm_
type: Reaction

886684
units: 716537
value: -999999.0
type: LocalParameter

846355
stoichiometry: 1.0
species: 256002
type: SpeciesReference

802955
stoichiometry: 1.0
species: 246883
type: SpeciesReference

944969
stoichiometry: 1.0
species: 258002
type: SpeciesReference

298218
kinetic law: 888771
product: 888759
reactant: 888747
reactant: 888735
notes: GENE_ASSOCIATION: ( b0071 and b0072 ) PROTEIN_ASSOCIATION: LeuC SUBSYSTEM: S_Valine__Leucine__and_Isoleucine_Metabolism PROTEIN_CLASS: 4.2.1.33
fast: false
reversible: true
name: R_2_isopropylmalate_hydratase
type: Reaction

766846
stoichiometry: 1.0
species: 243223
type: SpeciesReference

792548
units: 716537
value: 999999.0
type: LocalParameter

978368
units: 716537
value: 0.0
type: LocalParameter

972712
units: 716537
value: 0.0
type: LocalParameter

784926
units: 716537
value: 999999.0
type: LocalParameter

868106
units: 716537
value: 999999.0
type: LocalParameter

000840
stoichiometry: 1.0
species: 250942
type: SpeciesReference

771532
value: 0.0
type: LocalParameter

776477
units: 716537
value: 0.0
type: LocalParameter

842498
stoichiometry: 1.0
species: 241883
type: SpeciesReference

903503
units: 716537
value: 0.0
type: LocalParameter

264821
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M__S__Propane_1_2_diol_C3H8O2
type: Species

734484
value: 0.0
type: LocalParameter

309937
kinetic law: 971558
product: 971546
reactant: 971534
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
fast: false
reversible: true
name: R_Ribose_5_phosphate_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

849670
stoichiometry: 1.0
species: 248322
type: SpeciesReference

308557
notes: GENE_ASSOCIATION: b2499 PROTEIN_ASSOCIATION: PurM SUBSYSTEM: S_Purine_and_Pyrimidine_Biosynthesis PROTEIN_CLASS: 6.3.3.1
product: 962930
reactant: 962882
reversible: false
product: 962906
fast: false
type: Reaction
product: 962918
name: R_phosphoribosylaminoimidazole_synthase
reactant: 962894
product: 962942
kinetic law: 962954

744631
units: 716537
value: 999999.0
type: LocalParameter

835468
units: 716537
value: 0.0
type: LocalParameter

257282
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_1_2_didodecanoyl_sn_glycerol_3_phosphate_C27H51O8P1
type: Species

756597
value: 0.0
type: LocalParameter

988060
stoichiometry: 1.0
species: 240283
type: SpeciesReference

960983
value: 0.0
type: LocalParameter

758215
units: 716537
value: 999999.0
type: LocalParameter

751533
units: 716537
value: 999999.0
type: LocalParameter

973957
stoichiometry: 1.0
species: 242563
type: SpeciesReference

882736
stoichiometry: 1.0
species: 251342
type: SpeciesReference

857645
stoichiometry: 1.0
species: 247963
type: SpeciesReference

874264
units: 716537
value: 0.0
type: LocalParameter

266961
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_D_Fructose_6_phosphate_C6H11O9P
type: Species

800067
stoichiometry: 1.0
species: 246583
type: SpeciesReference

777788
value: -0.014043
type: LocalParameter

864420
units: 716537
value: 999999.0
type: LocalParameter

851010
units: 716537
value: 0.0
type: LocalParameter

964170
value: 0.0
type: LocalParameter

291378
product: 843345
reactant: 843308
kinetic law: 843357
name: R_ferrichrome__minus_Fe__secretion__to_periplasm_
fast: false
reactant: 843320
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
reversible: false
type: Reaction
product: 843333

751205
value: 0.0
type: LocalParameter

721080
stoichiometry: 1.0
species: 240703
type: SpeciesReference

310997
product: 978176
name: R_Succinylglutamic_semialdehyde_dehydrogenase
notes: GENE_ASSOCIATION: b1746 PROTEIN_ASSOCIATION: AstD SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS:
type: Reaction
product: 978152
product: 978164
reactant: 978128
reactant: 978140
reactant: 978116
reversible: false
kinetic law: 978188
fast: false

991876
value: 0.0
type: LocalParameter

736646
value: 0.0
type: LocalParameter

934229
units: 716537
value: 0.0
type: LocalParameter

993257
units: 716537
value: 999999.0
type: LocalParameter

894296
stoichiometry: 1.0
species: 253382
type: SpeciesReference

959245
stoichiometry: 1.0
species: 259781
type: SpeciesReference

953232
value: 0.0
type: LocalParameter

945845
stoichiometry: 1.0
species: 251342
type: SpeciesReference

930967
stoichiometry: 1.0
species: 239803
type: SpeciesReference

917939
stoichiometry: 1.0
species: 251342
type: SpeciesReference

853607
stoichiometry: 1.0
species: 246983
type: SpeciesReference

729792
value: 0.0
type: LocalParameter

848592
units: 716537
value: 999999.0
type: LocalParameter

717061
value: 0.0
type: LocalParameter

969519
stoichiometry: 1.0
species: 256562
type: SpeciesReference

917723
stoichiometry: 1.0
species: 255122
type: SpeciesReference

247663
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Fe_enterobactin_C30H27FeN3O15
type: Species

938396
value: 0.0
type: LocalParameter

985890
stoichiometry: 1.0
species: 251342
type: SpeciesReference

291638
notes: GENE_ASSOCIATION: ( ( b0684 and b3924 ) or ( b2895 and b3924 ) ) PROTEIN_ASSOCIATION: ( FldA and Fpr ) or ( FldB and Fpr ) SUBSYSTEM: S_Unassigned PROTEIN_CLASS: 1.18.1.2
reversible: false
fast: false
product: 846367
reactant: 846355
reactant: 846343
type: Reaction
product: 846379
reactant: 846331
kinetic law: 846391
name: R_flavodoxin_reductase__NADPH_

834814
units: 716537
value: 999999.0
type: LocalParameter

807495
units: 716537
value: 0.0
type: LocalParameter

980509
units: 716537
value: 0.0
type: LocalParameter

896301
units: 716537
value: 0.0
type: LocalParameter

956791
stoichiometry: 1.0
species: 233654
type: SpeciesReference

261361
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Thiocyanate_CNS
type: Species

824549
value: -0.095292
type: LocalParameter

815919
units: 716537
value: 0.0
type: LocalParameter

838154
units: 716537
value: 999999.0
type: LocalParameter

809553
stoichiometry: 1.0
species: 242943
type: SpeciesReference

970725
units: 716537
value: 999999.0
type: LocalParameter

281120
reversible: false
reactant: 786279
reactant: 786267
kinetic law: 786329
name: R_2_dehydro_3_deoxygluconokinase
product: 786317
notes: GENE_ASSOCIATION: b3526 PROTEIN_ASSOCIATION: KdgK SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 2.7.1.45
product: 786304
type: Reaction
fast: false
product: 786291

973437
stoichiometry: 1.0
species: 262141
type: SpeciesReference

291639
type: Reaction
reactant: 846489
reactant: 846477
notes: GENE_ASSOCIATION: ( ( b2763 and b2764 ) or b3844 ) PROTEIN_ASSOCIATION: ( CysIJ ) or ( Fre ) SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 1.5.1.30
reversible: false
name: R_flavin_reductase
fast: false
kinetic law: 846526
reactant: 846465
product: 846501
product: 846514

291379
product: 843466
name: R_ferrichrome_transport_via_ABC_system__periplasm_
reactant: 843454
product: 843503
notes: GENE_ASSOCIATION: ( b0153 and b0151 and b0152 ) PROTEIN_ASSOCIATION: ( FhuB and FhuC and FhuD ) SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
reactant: 843442
kinetic law: 843515
reversible: false
product: 843478
reactant: 843430
fast: false
type: Reaction
product: 843490

982383
units: 716537
value: 0.0
type: LocalParameter

284519
kinetic law: 806384
product: 806372
reactant: 806360
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_N_Acetylneuraminate_exchange
type: Reaction

823837
units: 716537
value: 999999.0
type: LocalParameter

971683
stoichiometry: 1.0
species: 251342
type: SpeciesReference

966603
stoichiometry: 1.0
species: 242583
type: SpeciesReference

253602
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_3_Bis_3_hydroxytetradecanoyl__beta_D_glucosaminyl_1_phosphate_C34H64NO12P
type: Species

759048
value: 0.0
type: LocalParameter

966059
stoichiometry: 1.0
species: 257982
type: SpeciesReference

298638
kinetic law: 891425
product: 891401
reversible: false
product: 891413
notes: GENE_ASSOCIATION: ( b4196 or b3581 ) PROTEIN_ASSOCIATION: ( SgaH ) or ( SgbH ) SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
reactant: 891377
name: R_3_keto_L_gulonate_6_phosphate_decarboxylase
type: Reaction
reactant: 891389
fast: false

300478
reversible: false
type: Reaction
product: 903275
notes: GENE_ASSOCIATION: b2923 PROTEIN_ASSOCIATION: ArgO SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
fast: false
reactant: 903251
name: R_L_lysine_transport_out_via_proton_antiport__cytoplasm_to_periplasm_
kinetic law: 903299
product: 903287
reactant: 903263

867708
stoichiometry: 1.0
species: 255862
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938180
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species: 243283
type: SpeciesReference

806252
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999278
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type: LocalParameter

949087
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value: 0.0
type: LocalParameter

997530
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species: 248323
type: SpeciesReference

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species: 255962
type: SpeciesReference

813329
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species: 246923
type: SpeciesReference

821089
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species: 268561
type: SpeciesReference

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species: 264701
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species: 260541
type: SpeciesReference

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species: 254342
type: SpeciesReference

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value: 999999.0
type: LocalParameter

844937
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species: 247783
type: SpeciesReference

956199
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type: LocalParameter

299278
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kinetic law: 895491
type: Reaction
reactant: 895431
product: 895467
product: 895455
name: R_Lysophospholipase_L1__2_acylglycerophosphotidate__n_C140___periplasm_
notes: GENE_ASSOCIATION: b0494 PROTEIN_ASSOCIATION: TesA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.5
reactant: 895443
product: 895479
fast: false

238443
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_alanine_D_glutamate_C8H13N2O5
type: Species

761672
units: 716537
value: -999999.0
type: LocalParameter

970953
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species: 259801
type: SpeciesReference

814279
units: 716537
value: 0.0
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908871
units: 716537
value: 0.0
type: LocalParameter

965394
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value: 0.0
type: LocalParameter

743472
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species: 248302
type: SpeciesReference

955558
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type: LocalParameter

757540
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species: 259141
type: SpeciesReference

744401
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type: LocalParameter

752919
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species: 241883
type: SpeciesReference

836666
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species: 251382
type: SpeciesReference

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727399
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species: 237504
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738060
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species: 247043
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873532
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species: 239803
type: SpeciesReference

298838
kinetic law: 892659
reactant: 892622
product: 892647
reactant: 892609
fast: false
product: 892635
type: Reaction
notes: GENE_ASSOCIATION: b0237 PROTEIN_ASSOCIATION: PepD SUBSYSTEM: S_Murein_Recycling PROTEIN_CLASS:
reversible: false
name: R_L_alanyl_gamma_L_glutamate_peptidase

294818
kinetic law: 867841
product: 867829
reactant: 867817
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_glycolate_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

904276
stoichiometry: 1.0
species: 251342
type: SpeciesReference

875798
units: 716537
value: -999999.0
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945163
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type: LocalParameter

951429
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species: 258522
type: SpeciesReference

755961
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value: 0.0
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936165
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value: 999999.0
type: LocalParameter

730141
units: 716537
value: 0.0
type: LocalParameter

827539
units: 716537
value: 0.0
type: LocalParameter

933720
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type: LocalParameter

987624
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value: 999999.0
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992650
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species: 258902
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species: 235654
type: SpeciesReference

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species: 251342
type: SpeciesReference

866985
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776277
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value: 0.0
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962349
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species: 241883
type: SpeciesReference

853910
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value: 999999.0
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730780
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species: 238343
type: SpeciesReference

994885
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value: 999999.0
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species: 239803
type: SpeciesReference

951031
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species: 258402
type: SpeciesReference

821211
units: 716537
value: -999999.0
type: LocalParameter

295778
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fast: false
product: 873962
reactant: 873926
name: R_GTP_cyclohydrolase_I
reversible: false
notes: GENE_ASSOCIATION: b2153 PROTEIN_ASSOCIATION: FolE SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS: 3.5.4.16
product: 873938
type: Reaction
product: 873950
reactant: 873914

972279
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species: 260102
type: SpeciesReference

937952
units: 716537
value: 1.64E-4
type: LocalParameter

726864
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species: 237444
type: SpeciesReference

998710
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930547
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type: LocalParameter

799958
stoichiometry: 1.0
species: 246583
type: SpeciesReference

952410
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898257
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species: 251342
type: SpeciesReference

918313
stoichiometry: 1.0
species: 251222
type: SpeciesReference

796191
units: 716537
value: -999999.0
type: LocalParameter

273880
product: 738206
product: 738218
name: R_acyl_CoA_dehydrogenase__decanoyl_CoA_
reversible: true
reactant: 738182
notes: GENE_ASSOCIATION: b0221 PROTEIN_ASSOCIATION: FadE SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.3.99.3
kinetic law: 738230
fast: false
type: Reaction
reactant: 738194

753196
stoichiometry: 1.0
species: 251342
type: SpeciesReference

977127
stoichiometry: 1.0
species: 260321
type: SpeciesReference

921279
stoichiometry: 1.0
species: 251342
type: SpeciesReference

767596
units: 716537
value: 0.00176
type: LocalParameter

879458
units: 716537
value: 999999.0
type: LocalParameter

768973
value: 0.0
type: LocalParameter

290479
reactant: 837342
kinetic law: 837414
type: Reaction
fast: false
reactant: 837318
reactant: 837330
product: 837402
reversible: false
notes: GENE_ASSOCIATION: ( b1805 or b1701 ) PROTEIN_ASSOCIATION: ( FadD ) or ( FadK ) SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 6.2.1.3
product: 837366
product: 837390
product: 837378
reactant: 837354
name: R_fatty_acid_CoA_ligase__octanoate_transport_via_vectoral_Co_A_coupling_

973206
stoichiometry: 1.0
species: 260081
type: SpeciesReference

735861
stoichiometry: 1.0
species: 263861
type: SpeciesReference

948409
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species: 251342
type: SpeciesReference

887349
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species: 252642
type: SpeciesReference

786291
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species: 235434
type: SpeciesReference

814059
units: 716537
value: 999999.0
type: LocalParameter

299498
kinetic law: 896953
product: 896929
fast: false
reactant: 896893
reversible: false
type: Reaction
product: 896941
notes: GENE_ASSOCIATION: b0494 PROTEIN_ASSOCIATION: TesA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.1.5
name: R_Lysophospholipase_L1__2_acylglycerophosphoethanolamine__n_C180___periplasm_
product: 896917
reactant: 896905

249782
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_D_Glucuronate_C6H9O7
type: Species

241403
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Aerobactin_C22H33FeN4O13
type: Species

723134
value: 0.0
type: LocalParameter

862380
stoichiometry: 1.0
species: 259141
type: SpeciesReference

830304
units: 716537
value: -999999.0
type: LocalParameter

817006
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species: 249282
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867937
stoichiometry: 1.0
species: 250062
type: SpeciesReference

941491
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type: LocalParameter

826371
units: 716537
value: -0.708202
type: LocalParameter

787175
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type: LocalParameter

959029
units: 716537
value: 0.0
type: LocalParameter

743254
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species: 257702
type: SpeciesReference

937322
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value: 0.243693
type: LocalParameter

948626
units: 716537
value: 999999.0
type: LocalParameter

861156
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981743
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value: 0.0
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778706
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species: 251342
type: SpeciesReference

888315
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value: 2.05E-4
type: LocalParameter

828696
units: 716537
value: 0.0
type: LocalParameter

768284
units: 716537
value: 0.0
type: LocalParameter

880098
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species: 251722
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996371
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767041
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860746
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810320
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757323
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species: 241763
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887095
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species: 251342
type: SpeciesReference

792995
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type: LocalParameter

959934
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species: 259022
type: SpeciesReference

990207
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species: 251342
type: SpeciesReference

748532
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species: 259681
type: SpeciesReference

760444
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805131
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value: 0.0
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991415
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species: 252602
type: SpeciesReference

750186
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species: 255962
type: SpeciesReference

772765
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species: 247203
type: SpeciesReference

779646
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species: 251342
type: SpeciesReference

268321
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
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type: Species

987842
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value: 999999.0
type: LocalParameter

780856
units: 716537
value: 0.0
type: LocalParameter

280020
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type: Reaction
reactant: 776513
kinetic law: 776549
notes: GENE_ASSOCIATION: b4111 PROTEIN_ASSOCIATION: ProPec SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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product: 776525
product: 776537
reactant: 776501
fast: false

940962
units: 716537
value: 0.0
type: LocalParameter

763141
value: 0.0
type: LocalParameter

890109
units: 716537
value: 999999.0
type: LocalParameter

235554
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_2_Dehydro_D_gluconate_C6H9O7
type: Species

879264
stoichiometry: 1.0
species: 239803
type: SpeciesReference

934674
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species: 243343
type: SpeciesReference

275300
notes: GENE_ASSOCIATION: b0159 PROTEIN_ASSOCIATION: Mtn SUBSYSTEM: S_Methionine_Metabolism PROTEIN_CLASS: 3.2.2.9
reactant: 746722
reversible: false
product: 746734
name: R_S_adenosylhomocysteine_nucleosidase
fast: false
kinetic law: 746758
product: 746746
type: Reaction
reactant: 746710

796829
stoichiometry: 1.0
species: 244943
type: SpeciesReference

788844
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species: 235634
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003701
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species: 264581
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904058
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species: 253182
type: SpeciesReference

274080
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product: 739373
product: 739361
reactant: 739349
notes: GENE_ASSOCIATION: ( b0118 or b1276 ) PROTEIN_ASSOCIATION: ( AcnB ) or ( AcnA ) SUBSYSTEM: S_Citric_Acid_Cycle PROTEIN_CLASS: 4.2.1.3
fast: false
reversible: true
name: R_aconitase__half_reaction_A__Citrate_hydro_lyase_
type: Reaction

722458
stoichiometry: 1.0
species: 241883
type: SpeciesReference

756370
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type: LocalParameter

976620
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species: 241883
type: SpeciesReference

905867
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value: 0.0
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882263
units: 716537
value: 0.0
type: LocalParameter

300698
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reactant: 904493
product: 904541
product: 904529
product: 904517
notes: GENE_ASSOCIATION: b1800 PROTEIN_ASSOCIATION: YeaU SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 1.1.1.83
fast: false
reactant: 904505
reversible: false
kinetic law: 904553
type: Reaction

747167
value: 0.0
type: LocalParameter

900073
value: 0.0
type: LocalParameter

849222
stoichiometry: 1.0
species: 248283
type: SpeciesReference

298418
kinetic law: 890085
product: 890073
reactant: 890061
reactant: 890049
notes: GENE_ASSOCIATION: ( b2342 or b3845 ) PROTEIN_ASSOCIATION: ( FadI ) or ( FadA ) SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 2.3.1.16
fast: false
reversible: false
name: R_3_ketoacyl_CoA_thiolase
type: Reaction

814966
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type: LocalParameter

827755
stoichiometry: 1.0
species: 260162
type: SpeciesReference

287959
kinetic law: 823038
product: 823026
reactant: 823014
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_2_alpha_D_Mannosyl__D_glycerate_exchange
type: Reaction

278820
reactant: 769118
notes: GENE_ASSOCIATION: ( b2538 and b2539 and b2540 and b2542 ) PROTEIN_ASSOCIATION: HcaCDEF SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
reactant: 769130
product: 769142
kinetic law: 769166
type: Reaction
name: R_Cinnamate_dioxygenase
product: 769154
reactant: 769094
reactant: 769106
fast: false
reversible: false

734024
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type: LocalParameter

751963
stoichiometry: 1.0
species: 240903
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882956
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value: 999999.0
type: LocalParameter

843442
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species: 251222
type: SpeciesReference

244583
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_dATP_C10H12N5O12P3
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770143
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value: 999999.0
type: LocalParameter

879674
stoichiometry: 1.0
species: 251342
type: SpeciesReference

282379
notes: GENE_ASSOCIATION: ( ( b4136 and b3781 ) or ( b4136 and b2582 ) ) PROTEIN_ASSOCIATION: ( DsbD and TrxA ) or ( DsbD and TrxC ) SUBSYSTEM: S_Unassigned PROTEIN_CLASS:
reactant: 794108
product: 794132
reactant: 794120
product: 794144
name: R_DsbD_reductase
fast: false
type: Reaction
kinetic law: 794156
reversible: false

730564
units: 716537
value: 0.0
type: LocalParameter

001201
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type: LocalParameter

726647
stoichiometry: 1.0
species: 255982
type: SpeciesReference

813123
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type: LocalParameter

826155
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value: 999999.0
type: LocalParameter

747757
stoichiometry: 1.0
species: 258902
type: SpeciesReference

898039
units: 716537
value: 999999.0
type: LocalParameter

967433
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species: 243223
type: SpeciesReference

829627
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value: 0.0
type: LocalParameter

731930
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species: 251622
type: SpeciesReference

846985
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895239
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value: 0.0
type: LocalParameter

290699
kinetic law: 838698
product: 838685
product: 838672
reactant: 838659
notes: GENE_ASSOCIATION: ( b2800 or b2738 ) PROTEIN_ASSOCIATION: ( FucA ) or ( YgbL ) SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 4.1.2.17
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reversible: true
name: R_L_fuculose_1_phosphate_aldolase
type: Reaction

807809
stoichiometry: 1.0
species: 240723
type: SpeciesReference

264601
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_D_Xylose_C5H10O5
type: Species

791652
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value: 0.0
type: LocalParameter

866008
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value: -999999.0
type: LocalParameter

832073
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type: LocalParameter

923634
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species: 239803
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866767
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species: 255942
type: SpeciesReference

838711
units: 716537
value: -999999.0
type: LocalParameter

243763
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_L_Carnitine_C7H15NO3
type: Species

962567
units: 716537
value: 0.0
type: LocalParameter

251162
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_Hydrogen_peroxide_H2O2
type: Species

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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
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type: Species

926865
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species: 251382
type: SpeciesReference

881003
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species: 251762
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872388
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species: 250622
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882688
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value: 999999.0
type: LocalParameter

876578
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value: 0.0
type: LocalParameter

762924
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species: 250202
type: SpeciesReference

238223
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_6_hydroxymethyl_dihydropterin_pyrophosphate_C7H8N5O8P2
type: Species

835032
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species: 251342
type: SpeciesReference

722748
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species: 241883
type: SpeciesReference

831307
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value: 0.0
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776695
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species: 249962
type: SpeciesReference

907643
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type: LocalParameter

772912
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species: 247923
type: SpeciesReference

957141
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value: 0.0
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817780
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species: 250102
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803785
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value: 999999.0
type: LocalParameter

276980
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product: 757237
product: 757225
reactant: 757213
notes: GENE_ASSOCIATION: b3960 PROTEIN_ASSOCIATION: ArgH SUBSYSTEM: S_Arginine_and_Proline_Metabolism PROTEIN_CLASS: 4.3.2.1
fast: false
reversible: true
name: R_argininosuccinate_lyase
type: Reaction

937733
value: 0.0
type: LocalParameter

749399
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type: LocalParameter

950487
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species: 251262
type: SpeciesReference

781647
stoichiometry: 1.0
species: 239803
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948867
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species: 239803
type: SpeciesReference

793238
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965804
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species: 243283
type: SpeciesReference

288419
kinetic law: 825263
product: 825251
reactant: 825239
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_O2_exchange
type: Reaction

284739
kinetic law: 807445
product: 807433
reactant: 807420
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Alanine_exchange
type: Reaction

820166
value: 0.0
type: LocalParameter

997758
value: -0.048649
type: LocalParameter

966482
stoichiometry: 1.0
species: 251262
type: SpeciesReference

292738
kinetic law: 854321
product: 854309
reactant: 854297
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_D_galactose_1_phosphate_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

283039
name: R_enoyl_acyl_carrier_protein_reductase__NADH___n_C180_
product: 798288
reversible: false
product: 798301
kinetic law: 798313
notes: GENE_ASSOCIATION: b1288 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.3.1.9
reactant: 798251
reactant: 798264
reactant: 798276
type: Reaction
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943678
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species: 258882
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893621
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species: 253122
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924093
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745407
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species: 240843
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initial amount: NaN
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812177
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903722
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value: -999999.0
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283719
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product: 802364
kinetic law: 802388
reversible: false
product: 802376
type: Reaction
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notes: GENE_ASSOCIATION: b0585 PROTEIN_ASSOCIATION: Fes SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:
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815510
units: 716537
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766627
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species: 239803
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889542
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937117
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310277
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product: 973606
type: Reaction
product: 973594
reactant: 973558
kinetic law: 973618

868325
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value: 999999.0
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722000
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288299
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product: 824670
reactant: 824658
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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reversible: true
name: R_Ni2_exchange
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806432
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value: 0.0
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311917
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product: 983855
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species: 233834
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785312
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initial amount: NaN
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858710
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871401
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964691
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873758
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735282
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729574
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species: 238303
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978796
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species: 260461
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species: 247203
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product: 843879
reactant: 843830
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product: 843842
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product: 843867
reactant: 843818
kinetic law: 843891
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Inorganic_Ion_Transport_and_Metabolism PROTEIN_CLASS:

958849
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species: 258982
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289679
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reactant: 831331
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730369
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type: LocalParameter

830753
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species: 263561
type: SpeciesReference

767740
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value: 999999.0
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285199
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product: 809661
reactant: 809649
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reversible: true
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units: 716537
value: 0.0
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763891
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species: 242205
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247443
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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species: 254302
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751758
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species: 233374
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824766
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species: 269321
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970507
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887796
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969736
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979316
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993037
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730986
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245803
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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861578
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301218
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product: 907691
product: 907679
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830909
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973654
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865040
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species: 250002
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initial amount: NaN
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878187
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806877
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861590
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767306
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301658
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751521
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758203
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species: 241883
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307757
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297278
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reversible: false
product: 883041
kinetic law: 883065
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reactant: 883017
product: 883053
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notes: GENE_ASSOCIATION: b0003 PROTEIN_ASSOCIATION: ThrB SUBSYSTEM: S_Threonine_and_Lysine_Metabolism PROTEIN_CLASS: 2.7.1.39

893850
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820873
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915875
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872599
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794192
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281139
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kinetic law: 786463
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reactant: 786414
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908199
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240243
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771520
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868118
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253822
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776465
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796952
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250082
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boundary condition: false
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initial concentration: NaN
initial amount: NaN
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initial concentration: NaN
initial amount: NaN
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807483
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306377
notes: GENE_ASSOCIATION: b0914 PROTEIN_ASSOCIATION: MsbA SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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reactant: 949001
product: 949025
product: 949038
type: Reaction
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reversible: false
reactant: 949013
kinetic law: 949075
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product: 949063
fast: false

970737
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type: LocalParameter

809565
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species: 266161
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838166
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759036
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value: 0.177619
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279400
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product: 772521
reactant: 772473
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notes: GENE_ASSOCIATION: b0914 PROTEIN_ASSOCIATION: MsbA SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS:
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fast: false
product: 772497
kinetic law: 772545
product: 772533
reversible: false
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769502
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value: -999999.0
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966615
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744838
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species: 240923
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310297
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product: 973714

834827
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311937
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product: 983953
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notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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812604
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865478
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species: 250182
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993244
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851022
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763129
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800079
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958307
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718676
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720282
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292758
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notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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982588
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736658
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288439
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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819211
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value: 0.0
type: LocalParameter

258122
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initial amount: NaN
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959233
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750390
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929531
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species: 258902
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276540
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744413
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727387
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951417
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954608
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856802
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245323
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956186
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806240
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313297
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reactant: 994462
product: 994487
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product: 994511
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987637
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product: 848653
reactant: 848641
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_D_fructuronate_transport_via_diffusion__extracellular_
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species: 258902
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901453
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297898
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product: 886769
reactant: 886757
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reversible: true
name: R_IMP_cyclohydrolase
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species: 233734
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initial amount: NaN
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type: Reaction
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species: 261021
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313296
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notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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817018
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species: 267701
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744016
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initial concentration: NaN
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842207
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271600
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reversible: true
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923403
stoichiometry: 1.0
species: 264241
type: SpeciesReference

873545
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species: 250882
type: SpeciesReference

806649
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species: 239603
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918301
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species: 241883
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species: 242883
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772777
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species: 251342
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species: 251222
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species: 261441
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273200
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reversible: true
name: R_acetoacetate_transport_via_diffusion__extracellular_to_periplasm_
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933295
units: 716537
value: 999999.0
type: LocalParameter

788832
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species: 256962
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species: 241283
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species: 258902
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882251
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940974
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976632
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species: 251222
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780843
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727169
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species: 237054
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756382
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species: 241263
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722446
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species: 235094
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942293
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734036
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258782
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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species: 248242
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718896
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species: 251262
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species: 258942
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937334
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948638
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type: LocalParameter

302037
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reversible: false
kinetic law: 912774
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reactant: 912714
product: 912738
reactant: 912726
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type: Reaction
product: 912762

778718
stoichiometry: 1.0
species: 258902
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861144
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237764
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boundary condition: false
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initial amount: NaN
in compartment: 233054
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type: LocalParameter

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743242
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species: 251342
type: SpeciesReference

985878
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species: 261901
type: SpeciesReference

301858
product: 911483
type: Reaction
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name: R_methionine_adenosyltransferase
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reactant: 911459
reactant: 911447
product: 911471
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kinetic law: 911507

953916
units: 716537
value: 0.0
type: LocalParameter

828684
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888303
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964158
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757311
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species: 243783
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917951
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species: 253082
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302038
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product: 912882

237763
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boundary condition: false
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initial amount: NaN
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987855
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768296
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792983
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value: 4.93E-4
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767053
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996383
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750174
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805143
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721068
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772352
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797373
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850216
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760432
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233374
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initial amount: NaN
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270481
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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722736
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species: 235174
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846997
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species: 247923
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835020
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species: 243343
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762936
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species: 246203
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252102
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boundary condition: false
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957153
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778501
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270480
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737503
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313077
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reversible: true
name: R_thiosulfate_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

896881
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species: 264201
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238424
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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858928
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849657
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826167
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269980
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972049
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species: 251342
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791664
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866779
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species: 256742
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305577
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product: 943291
reactant: 943267
name: R_pyruvate_dehydrogenase
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product: 943303
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722012
units: 716537
value: 999999.0
type: LocalParameter

234194
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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927336
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265381
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initial amount: NaN
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778926
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species: 238623
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934241
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240023
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912110
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832277
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species: 241763
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309217
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reactant: 967002
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reversible: false
kinetic law: 967062
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297058
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reactant: 881704
product: 881728
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280620
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966494
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species: 259581
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303277
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kinetic law: 926483
type: Reaction

781635
stoichiometry: 1.0
species: 244503
type: SpeciesReference

893633
stoichiometry: 1.0
species: 259761
type: SpeciesReference

301438
reversible: false
kinetic law: 908979
notes: GENE_ASSOCIATION: ( b0632 or b3182 or b0839 or b2010 ) PROTEIN_ASSOCIATION: ( DacA ) or ( DacB ) or ( DacC ) or ( DacD ) SUBSYSTEM: S_Murein_Biosynthesis PROTEIN_CLASS: 3.4.16.4
reactant: 908931
product: 908967
type: Reaction
reactant: 908943
name: R_murein_D_D_carboxypeptidase__murein5px4p___periplasm_
fast: false
product: 908955

883366
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type: LocalParameter

943666
stoichiometry: 1.0
species: 255942
type: SpeciesReference

931651
stoichiometry: 1.0
species: 251382
type: SpeciesReference

769937
stoichiometry: 1.0
species: 251262
type: SpeciesReference

897544
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type: LocalParameter

287479
kinetic law: 820713
product: 820701
reactant: 820689
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_IMP_exchange
type: Reaction

846125
stoichiometry: 1.0
species: 248562
type: SpeciesReference

886890
stoichiometry: 1.0
species: 251342
type: SpeciesReference

733688
units: 716537
value: 999999.0
type: LocalParameter

745419
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species: 251342
type: SpeciesReference

890966
value: 0.0
type: LocalParameter

860528
units: 716537
value: 0.0
type: LocalParameter

868337
value: 0.0
type: LocalParameter

295338
type: Reaction
notes: GENE_ASSOCIATION: b3449 PROTEIN_ASSOCIATION: UgpQ SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 3.1.4.46
product: 871089
reactant: 871065
kinetic law: 871113
reactant: 871053
name: R_Glycerophosphodiester_phosphodiesterase__Glycerophosphoethanolamine_
reversible: false
product: 871077
fast: false
product: 871101

948879
stoichiometry: 1.0
species: 251342
type: SpeciesReference

004595
units: 716537
value: 0.0
type: LocalParameter

937105
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species: 239803
type: SpeciesReference

801701
units: 716537
value: 999999.0
type: LocalParameter

944608
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species: 257902
type: SpeciesReference

755949
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952278
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value: 0.0
type: LocalParameter

875329
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value: 0.0
type: LocalParameter

773128
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value: 0.0
type: LocalParameter

258342
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
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type: Species

730998
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type: LocalParameter

750805
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species: 251342
type: SpeciesReference

926375
units: 716537
value: 0.0
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993025
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988048
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species: 237883
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969748
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718007
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species: 234254
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813558
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970519
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979328
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723998
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type: LocalParameter

889989
units: 716537
value: 0.0
type: LocalParameter

864407
units: 716537
value: 0.0
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744619
units: 716537
value: 0.0
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754705
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species: 239803
type: SpeciesReference

887784
units: 716537
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851457
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species: 248402
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865259
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species: 250062
type: SpeciesReference

790281
units: 716537
value: 999999.0
type: LocalParameter

719067
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755368
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species: 251342
type: SpeciesReference

985660
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species: 262121
type: SpeciesReference

973642
units: 716537
value: 999999.0
type: LocalParameter

777556
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type: LocalParameter

257982
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_phosphatidylethanolamine__dioctadec_11_enoyl__n_C181__C41H78N1O8P1
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915441
units: 716537
value: 0.0
type: LocalParameter

759891
units: 716537
value: 0.0
type: LocalParameter

729562
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species: 237484
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813341
stoichiometry: 1.0
species: 266941
type: SpeciesReference

927192
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value: 999999.0
type: LocalParameter

778270
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type: LocalParameter

237054
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
type: Species

735270
units: 716537
value: 0.0
type: LocalParameter

719187
value: 0.0
type: LocalParameter

879892
value: 0.0
type: LocalParameter

292038
type: Reaction
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fast: false
reactant: 850020
reversible: false
reactant: 850032
kinetic law: 850068
name: R_Glucose_1_phosphatase
product: 850056
product: 850044

985058
units: 716537
value: 0.0
type: LocalParameter

773840
stoichiometry: 1.0
species: 259161
type: SpeciesReference

804198
units: 716537
value: 0.0
type: LocalParameter

830741
value: -0.261803
type: LocalParameter

730357
units: 716537
value: 0.0
type: LocalParameter

856391
units: 716537
value: 0.0
type: LocalParameter

003920
stoichiometry: 1.0
species: 264721
type: SpeciesReference

920032
value: 0.0
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723847
stoichiometry: 1.0
species: 236334
type: SpeciesReference

235414
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_2_dodecanoyl_sn_glycerol_3_phosphate_C15H30O7P1
type: Species

938168
stoichiometry: 1.0
species: 257082
type: SpeciesReference

751746
stoichiometry: 1.0
species: 255962
type: SpeciesReference

807203
units: 716537
value: 0.0
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991852
units: 716537
value: -999999.0
type: LocalParameter

813570
units: 716537
value: 999999.0
type: LocalParameter

990957
stoichiometry: 1.0
species: 259721
type: SpeciesReference

298618
type: Reaction
fast: false
reactant: 891243
name: R_3_deoxy__D_manno_octulosonic__acid_8_phosphate_synthase
reactant: 891255
reversible: false
product: 891291
kinetic law: 891303
product: 891279
notes: GENE_ASSOCIATION: b1215 PROTEIN_ASSOCIATION: KdsA SUBSYSTEM: S_Lipopolysaccharide_Biosynthesis__Recycling PROTEIN_CLASS: 4.1.2.16
reactant: 891267

763117
units: 716537
value: 0.0
type: LocalParameter

964194
stoichiometry: 1.0
species: 259322
type: SpeciesReference

821656
stoichiometry: 1.0
species: 253362
type: SpeciesReference

907208
stoichiometry: 1.0
species: 254322
type: SpeciesReference

819223
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type: LocalParameter

996359
units: 716537
value: 0.0
type: LocalParameter

851034
value: 0.0
type: LocalParameter

718663
stoichiometry: 1.0
species: 236494
type: SpeciesReference

735849
stoichiometry: 1.0
species: 263441
type: SpeciesReference

917915
stoichiometry: 1.0
species: 253562
type: SpeciesReference

959221
stoichiometry: 1.0
species: 238623
type: SpeciesReference

777763
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720270
stoichiometry: 1.0
species: 234954
type: SpeciesReference

839377
stoichiometry: 1.0
species: 256562
type: SpeciesReference

257262
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233054
name: M_1_2_didodecanoyl_sn_glycerol_3_phosphate_C27H51O8P1
type: Species

872184
units: 716537
value: 999999.0
type: LocalParameter

730129
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type: LocalParameter

002601
units: 716537
value: -999999.0
type: LocalParameter

868996
value: -0.028588
type: LocalParameter

717085
stoichiometry: 1.0
species: 233294
type: SpeciesReference

962362
stoichiometry: 1.0
species: 251222
type: SpeciesReference

882239
units: 716537
value: 999999.0
type: LocalParameter

280899
type: Reaction
reactant: 783927
fast: false
reactant: 783939
product: 783963
reversible: false
notes: GENE_ASSOCIATION: b0175 PROTEIN_ASSOCIATION: CdsA SUBSYSTEM: S_Glycerophospholipid_Metabolism PROTEIN_CLASS: 2.7.7.41
kinetic law: 783987
reactant: 783951
product: 783975
name: R_CDP_diacylglycerol_synthetase__n_C140_

938372
units: 716537
value: 0.0
type: LocalParameter

268761
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_L_Lyxose_C5H10O5
type: Species

896326
value: 0.0
type: LocalParameter

759024
value: 0.0
type: LocalParameter

966627
stoichiometry: 1.0
species: 243223
type: SpeciesReference

797144
units: 716537
value: 999999.0
type: LocalParameter

955571
stoichiometry: 1.0
species: 251262
type: SpeciesReference

796841
stoichiometry: 1.0
species: 255982
type: SpeciesReference

930294
units: 716537
value: 999999.0
type: LocalParameter

951670
stoichiometry: 1.0
species: 243223
type: SpeciesReference

906411
value: -0.197606
type: LocalParameter

802979
units: 716537
value: -999999.0
type: LocalParameter

774807
stoichiometry: 1.0
species: 241883
type: SpeciesReference

287439
kinetic law: 820518
product: 820506
reactant: 820494
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_L_Idonate_exchange
type: Reaction

846331
stoichiometry: 1.0
species: 247863
type: SpeciesReference

788203
units: 716537
value: 999999.0
type: LocalParameter

933708
units: 716537
value: 0.0
type: LocalParameter

908187
units: 716537
value: 0.0
type: LocalParameter

758239
units: 716537
value: 0.0
type: LocalParameter

871209
stoichiometry: 1.0
species: 246823
type: SpeciesReference

773164
stoichiometry: 1.0
species: 251382
type: SpeciesReference

820861
units: 716537
value: 0.0
type: LocalParameter

270900
kinetic law: 719811
product: 719799
reactant: 719787
notes: GENE_ASSOCIATION: b2835 PROTEIN_ASSOCIATION: LplT SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
fast: false
reversible: false
name: R_2_Acyl_sn_glycero_3_phosphoethanolamine__n_C120__transporter_via_facilitated_diffusion__periplasm_
type: Reaction

796964
stoichiometry: 1.0
species: 242523
type: SpeciesReference

243183
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_cardiolipin__tetraoctadecanoyl__n_C180__C81H156O17P2
type: Species

921976
stoichiometry: 1.0
species: 256002
type: SpeciesReference

728750
units: 716537
value: 999999.0
type: LocalParameter

771556
value: 0.0
type: LocalParameter

000864
stoichiometry: 1.0
species: 249262
type: SpeciesReference

903528
value: 0.0
type: LocalParameter

273860
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fast: false
type: Reaction
product: 738084
product: 738096
name: R_acyl_CoA_dehydrogenase__octanoyl_CoA_
notes: GENE_ASSOCIATION: b0221 PROTEIN_ASSOCIATION: FadE SUBSYSTEM: S_Membrane_Lipid_Metabolism PROTEIN_CLASS: 1.3.99.3
reactant: 738072
reactant: 738060
kinetic law: 738108

904481
value: -0.004012
type: LocalParameter

894007
stoichiometry: 1.0
species: 241883
type: SpeciesReference

893863
stoichiometry: 1.0
species: 241883
type: SpeciesReference

972736
value: 0.0
type: LocalParameter

308537
product: 962760
product: 962796
kinetic law: 962808
reversible: true
product: 962772
notes: GENE_ASSOCIATION: b4005 PROTEIN_ASSOCIATION: PurDec SUBSYSTEM: S_Purine_and_Pyrimidine_Biosynthesis PROTEIN_CLASS: 6.3.4.13
name: R_phosphoribosylglycinamide_synthase
reactant: 962723
fast: false
reactant: 962748
type: Reaction
reactant: 962736
product: 962784

795594
units: 716537
value: 0.0
type: LocalParameter

261381
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_Thiocyanate_CNS
type: Species

996588
units: 716537
value: -999999.0
type: LocalParameter

290499
product: 837535
reversible: false
notes: GENE_ASSOCIATION: b3844 PROTEIN_ASSOCIATION: Fre SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
reactant: 837499
name: R_FAD_reductase
type: Reaction
reactant: 837511
fast: false
kinetic law: 837547
reactant: 837487
product: 837523

806889
units: 716537
value: 999999.0
type: LocalParameter

744655
units: 716537
value: 0.0
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780140
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species: 251382
type: SpeciesReference

289099
kinetic law: 828552
product: 828540
reactant: 828528
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Succinate_exchange
type: Reaction

760882
stoichiometry: 1.0
species: 256682
type: SpeciesReference

878199
units: 716537
value: 999999.0
type: LocalParameter

898051
value: 0.0
type: LocalParameter

865052
stoichiometry: 1.0
species: 255862
type: SpeciesReference

858952
units: 716537
value: 0.0
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734460
units: 716537
value: -999999.0
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874288
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type: LocalParameter

957117
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value: 999999.0
type: LocalParameter

935906
value: 0.0
type: LocalParameter

862368
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species: 239823
type: SpeciesReference

247683
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
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758843
units: 716537
value: 0.0
type: LocalParameter

253622
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233034
name: M_lipoprotein_XC16H30O1
type: Species

799317
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species: 251342
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849695
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species: 248302
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832049
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740583
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751557
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930342
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species: 240743
type: SpeciesReference

767318
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941214
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value: 999999.0
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882712
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value: 0.0
type: LocalParameter

857669
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species: 239803
type: SpeciesReference

266281
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
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780695
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value: 0.0
type: LocalParameter

944486
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species: 258902
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791894
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value: 999999.0
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951055
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value: 0.0
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873558
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species: 251342
type: SpeciesReference

830329
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999978
units: 716537
value: 999999.0
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842219
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776253
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species: 258902
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744028
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value: 999999.0
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983205
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species: 251222
type: SpeciesReference

300498
kinetic law: 903395
product: 903383
reactant: 903371
notes: GENE_ASSOCIATION: ( b0241 or b0929 or b1377 or b2215 ) PROTEIN_ASSOCIATION: ( PhoE ) or ( OmpF ) or ( OmpN ) or ( OmpC ) SUBSYSTEM: S_Transport__Outer_Membrane_Porin PROTEIN_CLASS:
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reversible: true
name: R_L_lysine_transport_via_diffusion__extracellular_to_periplasm_
type: Reaction

824561
stoichiometry: 1.0
species: 256062
type: SpeciesReference

768997
stoichiometry: 1.0
species: 237803
type: SpeciesReference

920590
stoichiometry: 1.0
species: 255942
type: SpeciesReference

753172
stoichiometry: 1.0
species: 240643
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881789
value: 0.0
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998734
stoichiometry: 1.0
species: 263861
type: SpeciesReference

821235
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937976
stoichiometry: 1.0
species: 236115
type: SpeciesReference

952434
stoichiometry: 1.0
species: 258702
type: SpeciesReference

766651
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type: LocalParameter

948891
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species: 258902
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799934
stoichiometry: 1.0
species: 246563
type: SpeciesReference

281699
kinetic law: 789942
product: 789930
reactant: 789918
notes: GENE_ASSOCIATION: b2303 PROTEIN_ASSOCIATION: FolXec SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
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reversible: true
name: R_dihydroneopterin_triphosphate_2__epimerase
type: Reaction

309917
reversible: false
fast: false
product: 971436
reactant: 971412
name: R_ribose_5_phosphate_phosphatase
reactant: 971424
product: 971448
kinetic law: 971461
notes: GENE_ASSOCIATION: b4055 PROTEIN_ASSOCIATION: AphA SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS:
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873782
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species: 250082
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298858
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reversible: false
notes: GENE_ASSOCIATION: b1415 PROTEIN_ASSOCIATION: AldA SUBSYSTEM: S_Alternate_Carbon_Metabolism PROTEIN_CLASS: 1.2.1.21
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type: Reaction
product: 892792
kinetic law: 892804
reactant: 892743
reactant: 892756
reactant: 892731
product: 892780
fast: false

718468
units: 716537
value: 999999.0
type: LocalParameter

918677
value: 0.0
type: LocalParameter

264841
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
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719606
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species: 235974
type: SpeciesReference

743278
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value: 0.0
type: LocalParameter

285399
kinetic law: 810645
product: 810633
reactant: 810621
notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
name: R_Cu_exchange
type: Reaction

787151
value: 0.0
type: LocalParameter

960705
units: 716537
value: 999999.0
type: LocalParameter

306797
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name: R_protoheme_transport_via_ABC_system__periplasm_
notes: GENE_ASSOCIATION: ( b2201 and b2200 and b2199 ) PROTEIN_ASSOCIATION: ( CcmA and CcmB and CcmC ) SUBSYSTEM: S_Transport__Inner_Membrane PROTEIN_CLASS:
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reactant: 951791
product: 951854
product: 951841
fast: false
type: Reaction
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product: 951828
reactant: 951778
kinetic law: 951866

865682
value: 0.0
type: LocalParameter

959005
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species: 258982
type: SpeciesReference

266981
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
in compartment: 233014
name: M_Formaldehyde_CH2O
type: Species

993270
value: 0.0
type: LocalParameter

273220
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product: 734338
name: R_acetaldehyde_dehydrogenase__acetylating_
notes: GENE_ASSOCIATION: ( b0351 or b1241 ) PROTEIN_ASSOCIATION: ( MhpF ) or ( AdhE ) SUBSYSTEM: S_Pyruvate_Metabolism PROTEIN_CLASS: 1.2.1.10
reactant: 734277
reactant: 734302
kinetic law: 734350
type: Reaction
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fast: false
reversible: true
product: 734326

982166
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species: 258062
type: SpeciesReference

895263
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826395
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species: 259001
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723110
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value: 0.0
type: LocalParameter

295798
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product: 874108
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notes: GENE_ASSOCIATION: b1277 PROTEIN_ASSOCIATION: RibA SUBSYSTEM: S_Cofactor_and_Prosthetic_Group_Biosynthesis PROTEIN_CLASS:
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kinetic law: 874120
product: 874071
type: Reaction
reactant: 874059
name: R_GTP_cyclohydrolase_II__25drapp_
product: 874096
reactant: 874047

944632
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species: 251342
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product: 896809
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product: 896784
reactant: 896760
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product: 895335
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reactant: 895311
reactant: 895299
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273000
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reversible: false
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type: Reaction

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species: 240343
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826179
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813147
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751987
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kinetic law: 746878
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reversible: true
reactant: 746830
product: 746866

972291
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species: 264561
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983422
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species: 261241
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initial concentration: NaN
initial amount: NaN
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species: 239323
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718249
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973981
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813896
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721770
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907667
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species: 254362
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738048
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287939
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reversible: true
name: R_D_Mannose_exchange
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757347
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873770
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981767
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750378
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244563
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initial amount: NaN
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823850
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initial concentration: NaN
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initial concentration: NaN
initial amount: NaN
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923211
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283059
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fast: false
reactant: 798386
product: 798422
product: 798434
reactant: 798410
type: Reaction
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reactant: 798398
name: R_enoyl_acyl_carrier_protein_reductase__NADPH___n_C180_
notes: GENE_ASSOCIATION: b1288 PROTEIN_ASSOCIATION: FabI SUBSYSTEM: S_Cell_Envelope_Biosynthesis PROTEIN_CLASS: 1.3.1.10

988593
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772327
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284759
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name: R_D_Alanyl_D_alanine_exchange
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288019
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product: 823314
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
fast: false
reversible: true
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831583
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730345
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reactant: 776645

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796623
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777544
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915453
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973678
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262581
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282399
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product: 794253
fast: false
reactant: 794241

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858734
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253402
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997734
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940520
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793214
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815534
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285179
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notes: GENE_ASSOCIATION: PROTEIN_ASSOCIATION: SUBSYSTEM: S_ PROTEIN_CLASS:
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846113
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890954
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243783
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861699
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722024
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744874
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965115
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881292
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291399
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871425
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product: 948891
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751545
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245823
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967409
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product: 844132
reactant: 844108
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292778
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283079
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979909
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product: 957866
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reversible: false
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reactant: 965550

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291879
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reversible: false
kinetic law: 848907
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784950
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value: 6.57E-4
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301878
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821247
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