619059
stoichiometry: 1.0
species: 512574
type: SpeciesReference

628062
value: 0.91
type: LocalParameter

619338
stoichiometry: 1.0
species: 512597
type: SpeciesReference

619422
stoichiometry: 1.0
species: 512628
type: SpeciesReference

628082
value: 0.1
type: LocalParameter

619578
stoichiometry: 1.0
species: 512538
type: SpeciesReference

618783
stoichiometry: 1.0
species: 512535
type: SpeciesReference

512737
kinetic law: 619794
product: 619782
product: 619770
reactant: 619758
reactant: 619746
fast: false
reversible: false
type: Reaction

628096
value: 6.82E-4
type: LocalParameter

619722
stoichiometry: 1.0
species: 512640
type: SpeciesReference

512727
kinetic law: 619602
product: 619590
product: 619578
reactant: 619566
fast: false
reversible: true
type: Reaction

619710
stoichiometry: 1.0
species: 512544
type: SpeciesReference

628061
value: 1.1918
type: LocalParameter

618927
stoichiometry: 1.0
species: 512544
type: SpeciesReference

628081
value: 5.12
type: LocalParameter

512574
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0451809175780963
initial amount: NaN
in compartment: 512531
type: Species

628075
value: 1.4
type: LocalParameter

619590
stoichiometry: 1.0
species: 512566
type: SpeciesReference

512589
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.885688538360659
initial amount: NaN
in compartment: 512531
type: Species

619362
stoichiometry: 1.0
species: 512601
type: SpeciesReference

628120
value: 6719.0
type: LocalParameter

618819
stoichiometry: 1.0
species: 512544
type: SpeciesReference

619108
stoichiometry: 1.0
species: 512580
type: SpeciesReference

MODEL2426780967
volume units: volume
reaction: 512716
species: 512637
reaction: 512707
reaction: 512703
is described by: http://identifiers.org/pubmed/17667951
species: 512593
species: 512544
reaction: 512665
curated: false
species: 512538
species: 512625
species: 512628
species: 512563
species: 512574
reaction: 512727
reaction: 512688
reaction: 512730
substance units: substance
species: 512640
reaction: 512713
type: SBMLModel
notes: Increased glycolytic flux as an outcome of whole-genome duplication in yeast. GC Conant and KH Wolfe, Mol Syst Biol 3:129,2007 This is the original model reproducing figure 2A of the article submitted by the authors. There exists a curated version with BIOMD0000000176 that reproduces figures 2A,3A and 3B from the publication. BIOMD0000000176 encompasses MODEL2426780967, MODEL2427021978, MODEL2427095802. This model originates from BioModels Database: A Database of Annotated Published Models. It is copyright (c) 2005-2011 The BioModels.net Team. To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information. In summary, you are entitled to use this encoded model in absolutely any manner you deem suitable, verbatim, or with modification, alone or embedded it in a larger context, redistribute it, commercially or not, in a restricted way or not.. To cite BioModels Database, please use: Li C, Donizelli M, Rodriguez N, Dharuri H, Endler L, Chelliah V, Li L, He E, Henry A, Stefan MI, Snoep JL, Hucka M, Le Novère N, Laibe C (2010) BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models. BMC Syst Biol., 4:92.
species: 512604
species: 512597
reaction: 512692
species: 512589
species: 512566
reaction: 512763
time units: time
reaction: 512653
species: 512577
species: 512643
reaction: 512710
species: 512647
reaction: 512656
compartment: 512531
species: 512583
species: 512634
species: 512571
reaction: 512737
species: 512559
reaction: 512721
reaction: 512700
length unit: length
species: 512601
species: 512535
species: 512650
reaction: 512659
area units: area
reaction: 512662
reaction: 512734
species: 512580
species: 512541

619047
stoichiometry: 1.0
species: 512571
type: SpeciesReference

619326
stoichiometry: 1.0
species: 512544
type: SpeciesReference

628074
value: 1056.0
type: LocalParameter

619410
stoichiometry: 1.0
species: 512604
type: SpeciesReference

628094
value: 0.02
type: LocalParameter

628181
value: 1.0
type: LocalParameter

512531
constant: true
size: 1.0
spatial dimensions: 3.0
type: Compartment

512688
kinetic law: 619072
product: 619059
reactant: 619047
fast: false
reversible: true
type: Reaction

512763
kinetic law: 619854
product: 619842
product: 619830
reactant: 619818
reactant: 619806
fast: false
reversible: false
type: Reaction

512707
kinetic law: 619314
modifier: 619302
product: 619290
reactant: 619277
fast: false
reversible: true
type: Reaction

618795
stoichiometry: 1.0
species: 512538
type: SpeciesReference

628084
value: 0.71
type: LocalParameter

512659
kinetic law: 618891
modifier: 618879
product: 618867
reactant: 618855
fast: false
reversible: true
type: Reaction

619638
stoichiometry: 1.0
species: 512577
type: SpeciesReference

628121
value: 0.0098
type: LocalParameter

628063
value: 236.7
type: LocalParameter

628073
value: 0.23
type: LocalParameter

618939
stoichiometry: 1.0
species: 512563
type: SpeciesReference

628093
value: 0.0174
type: LocalParameter

628180
value: 4300.0
type: LocalParameter

619229
stoichiometry: 1.0
species: 512589
type: SpeciesReference

628160
value: 6.9E-5
type: LocalParameter

512716
reactant: 619470
reversible: true
fast: false
reactant: 619458
type: Reaction
modifier: 619506
product: 619494
product: 619482
kinetic law: 619518

628141
value: 6.7
type: LocalParameter

619350
stoichiometry: 1.0
species: 512538
type: SpeciesReference

512577
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.50329030201531
initial amount: NaN
in compartment: 512531
type: Species

628183
value: 0.93
type: LocalParameter

512583
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0867096979846952
initial amount: NaN
in compartment: 512531
type: Species

512647
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 512531
type: Species

512637
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.15
initial amount: NaN
in compartment: 512531
type: Species

628109
value: 10.0
type: LocalParameter

619650
stoichiometry: 1.0
species: 512637
type: SpeciesReference

619746
stoichiometry: 1.0
species: 512538
type: SpeciesReference

628173
value: 45.0
type: LocalParameter

628142
value: 0.5
type: LocalParameter

619818
stoichiometry: 2.0
species: 512604
type: SpeciesReference

628148
value: 6500.0
type: LocalParameter

628132
value: 2585.0
type: LocalParameter

512563
constant: false
boundary condition: false
has only substance units: false
initial concentration: 6.22132076069411
initial amount: NaN
in compartment: 512531
type: Species

618807
stoichiometry: 1.0
species: 512541
type: SpeciesReference

618987
stoichiometry: 1.0
species: 512563
type: SpeciesReference

628058
value: 97.24
type: LocalParameter

628118
value: 0.09
type: LocalParameter

512535
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.097652231064563
initial amount: NaN
in compartment: 512531
type: Species

619120
stoichiometry: 1.0
species: 512583
type: SpeciesReference

628085
value: 0.66
type: LocalParameter

628159
value: 0.92
type: LocalParameter

628143
value: 1000.0
type: LocalParameter

628071
value: 30.0
type: LocalParameter

628099
value: 0.111
type: LocalParameter

628149
value: 21.0
type: LocalParameter

619096
stoichiometry: 1.0
species: 512577
type: SpeciesReference

619758
stoichiometry: 2.0
species: 512541
type: SpeciesReference

628185
value: 2.4
type: LocalParameter

628107
value: 2.4
type: LocalParameter

619566
stoichiometry: 2.0
species: 512544
type: SpeciesReference

512571
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.00415254899644
initial amount: NaN
in compartment: 512531
type: Species

628088
value: 0.65
type: LocalParameter

512721
kinetic law: 619554
product: 619542
reactant: 619530
fast: false
reversible: false
type: Reaction

618999
stoichiometry: 1.0
species: 512571
type: SpeciesReference

619181
stoichiometry: 1.0
species: 512538
type: SpeciesReference

628130
value: 0.003
type: LocalParameter

628146
value: 0.53
type: LocalParameter

628070
value: 2000.0
type: LocalParameter

628184
value: 6.0
type: LocalParameter

618735
stoichiometry: 1.0
species: 512625
type: SpeciesReference

628106
value: 2.0
type: LocalParameter

619084
stoichiometry: 1.0
species: 512574
type: SpeciesReference

628145
value: 0.14
type: LocalParameter

628087
value: 100.0
type: LocalParameter

628170
value: 39.5
type: LocalParameter

628097
value: 0.397
type: LocalParameter

512734
kinetic law: 619734
product: 619722
product: 619710
reactant: 619698
reactant: 619686
fast: false
reversible: false
type: Reaction

628131
value: 0.2
type: LocalParameter

628135
value: 0.19
type: LocalParameter

628157
value: 17.0
type: LocalParameter

619842
stoichiometry: 1.0
species: 512647
type: SpeciesReference

628125
value: 3200.0
type: LocalParameter

512604
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.178140579850657
initial amount: NaN
in compartment: 512531
type: Species

512710
reactant: 619326
product: 619350
type: Reaction
reversible: true
modifier: 619374
product: 619362
fast: false
reactant: 619338
kinetic law: 619386

628177
value: 0.4
type: LocalParameter

512643
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 512531
type: Species

512662
reactant: 618903
type: Reaction
reactant: 618915
reversible: false
modifier: 618951
modifier: 618963
fast: false
product: 618927
product: 618939
kinetic law: 618975

619494
stoichiometry: 1.0
species: 512604
type: SpeciesReference

628115
value: 1152.0
type: LocalParameter

512538
constant: false
boundary condition: false
has only substance units: false
initial concentration: 2.52512746499271
initial amount: NaN
in compartment: 512531
type: Species

618747
stoichiometry: 1.0
species: 512535
type: SpeciesReference

512692
reactant: 619084
type: Reaction
product: 619120
product: 619108
fast: false
reactant: 619096
modifier: 619132
kinetic law: 619145
reversible: true

619011
stoichiometry: 1.0
species: 512574
type: SpeciesReference

628166
value: 1.11
type: LocalParameter

628134
value: 1.2
type: LocalParameter

512541
constant: false
boundary condition: false
has only substance units: false
initial concentration: 2.67504014044787
initial amount: NaN
in compartment: 512531
type: Species

628156
value: 209.5
type: LocalParameter

628124
value: 1288.0
type: LocalParameter

628104
value: 0.069
type: LocalParameter

512653
kinetic law: 618771
modifier: 618759
product: 618747
reactant: 618735
fast: false
reversible: true
type: Reaction

619277
stoichiometry: 1.0
species: 512593
type: SpeciesReference

512634
constant: false
boundary condition: true
has only substance units: false
initial concentration: 50.0
initial amount: NaN
in compartment: 512531
type: Species

619542
stoichiometry: 1.0
species: 512544
type: SpeciesReference

512593
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.127695817386632
initial amount: NaN
in compartment: 512531
type: Species

512580
constant: false
boundary condition: false
has only substance units: false
initial concentration: 7.36873499865602E-4
initial amount: NaN
in compartment: 512531
type: Species

628186
value: 21.4
type: LocalParameter

628114
value: 1.0
type: LocalParameter

628123
value: 0.06
type: LocalParameter

619290
stoichiometry: 1.0
species: 512597
type: SpeciesReference

628137
value: 0.08
type: LocalParameter

512665
kinetic law: 619035
modifier: 619023
product: 619011
product: 618999
reactant: 618987
fast: false
reversible: true
type: Reaction

628155
value: 1.9
type: LocalParameter

619830
stoichiometry: 3.0
species: 512583
type: SpeciesReference

628169
value: 90.0
type: LocalParameter

512650
constant: false
boundary condition: true
has only substance units: false
initial concentration: 1.0
initial amount: NaN
in compartment: 512531
type: Species

628103
value: 0.3
type: LocalParameter

619482
stoichiometry: 1.0
species: 512583
type: SpeciesReference

628175
value: 47.11
type: LocalParameter

512730
product: 619638
reversible: false
kinetic law: 619674
product: 619650
type: Reaction
reactant: 619614
fast: false
reactant: 619626
modifier: 619662

628117
value: 0.21
type: LocalParameter

619458
stoichiometry: 1.0
species: 512577
type: SpeciesReference

619193
stoichiometry: 1.0
species: 512589
type: SpeciesReference

628168
value: 1.1
type: LocalParameter

619806
stoichiometry: 3.0
species: 512577
type: SpeciesReference

512625
constant: false
boundary condition: true
has only substance units: false
initial concentration: 50.0
initial amount: NaN
in compartment: 512531
type: Species

512544
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.28198768168719
initial amount: NaN
in compartment: 512531
type: Species

628174
value: 100.0
type: LocalParameter

619530
stoichiometry: 1.0
species: 512538
type: SpeciesReference

628153
value: 4.33
type: LocalParameter

628139
value: 0.04
type: LocalParameter

628163
value: 0.11
type: LocalParameter

512700
type: Reaction
product: 619193
reactant: 619169
reversible: true
reactant: 619157
modifier: 619205
fast: false
product: 619181
kinetic law: 619217

619470
stoichiometry: 1.0
species: 512634
type: SpeciesReference

618903
stoichiometry: 1.0
species: 512538
type: SpeciesReference

628091
value: 0.0995
type: LocalParameter

628101
value: 94.69
type: LocalParameter

628111
value: 1.0E7
type: LocalParameter

619626
stoichiometry: 1.0
species: 512583
type: SpeciesReference

619770
stoichiometry: 1.0
species: 512544
type: SpeciesReference

512628
constant: false
boundary condition: true
has only substance units: false
initial concentration: 1.0
initial amount: NaN
in compartment: 512531
type: Species

628066
value: 0.08
type: LocalParameter

619398
stoichiometry: 1.0
species: 512601
type: SpeciesReference

512566
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.292884853320091
initial amount: NaN
in compartment: 512531
type: Species

628128
value: 0.3
type: LocalParameter

619157
stoichiometry: 1.0
species: 512544
type: SpeciesReference

619686
stoichiometry: 1.0
species: 512538
type: SpeciesReference

628152
value: 857.8
type: LocalParameter

628162
value: 0.17
type: LocalParameter

628138
value: 201.6
type: LocalParameter

628079
value: 110.0
type: LocalParameter

628100
value: 3.0
type: LocalParameter

618855
stoichiometry: 1.0
species: 512541
type: SpeciesReference

512597
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.0632352144936527
initial amount: NaN
in compartment: 512531
type: Species

628110
value: 450000.0
type: LocalParameter

628151
value: 1.5
type: LocalParameter

628127
value: 0.53
type: LocalParameter

512640
constant: false
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: 512531
type: Species

628165
value: 0.031
type: LocalParameter

512559
constant: false
boundary condition: false
has only substance units: false
initial concentration: 0.624976405532373
initial amount: NaN
in compartment: 512531
type: Species

619614
stoichiometry: 1.0
species: 512571
type: SpeciesReference

619782
stoichiometry: 1.0
species: 512643
type: SpeciesReference

628078
value: 0.3
type: LocalParameter

618915
stoichiometry: 1.0
species: 512559
type: SpeciesReference

512656
kinetic law: 618843
modifier: 618831
product: 618807
reversible: true
fast: false
reactant: 618795
product: 618819
reactant: 618783
type: Reaction

619698
stoichiometry: 1.0
species: 512541
type: SpeciesReference

512601
constant: false
boundary condition: false
has only substance units: false
initial concentration: 1.81531251192736
initial amount: NaN
in compartment: 512531
type: Species

512713
kinetic law: 619446
modifier: 619434
product: 619422
product: 619410
reactant: 619398
fast: false
reversible: false
type: Reaction

512703
kinetic law: 619265
modifier: 619253
product: 619241
reactant: 619229
fast: false
reversible: true
type: Reaction

619241
stoichiometry: 1.0
species: 512593
type: SpeciesReference

619169
stoichiometry: 1.0
species: 512580
type: SpeciesReference

628090
value: 0.0845
type: LocalParameter

628077
value: 0.29
type: LocalParameter

628067
value: 0.15
type: LocalParameter

618867
stoichiometry: 1.0
species: 512559
type: SpeciesReference

628178
value: 0.023
type: LocalParameter