http://identifiers.org/biomodels.db/MODEL1304240000#_0ea83c68_0b7e_42f0_b04d_952f8f490107
fast: false
reversible: false
type: Reaction
notes: GPR_ASSOCIATION: RSP_0467 and RSP_0468 GENE_LIST: RSP_0467; RSP_0468; SUBSYSTEM: Ubiquinone and other terpenoid-quinone biosynthesis Equation: 3-Octaprenyl-4-hydroxybenzoate + H+ <=> 2-Octaprenylphenol + CO2 Confidence Level: 2
name: 3-octaprenyl-4hydroxybenzoate decarboxylase/carboxy-lyase

http://identifiers.org/biomodels.db/MODEL1304240000#_0fbdbba4_0ab2_4f1c_9012_7bd18f501b1c
notes: GPR_ASSOCIATION: RSP_0267 GENE_LIST: RSP_0267; SUBSYSTEM: Carotenoid biosynthesis Equation: Anhydrorhodovibrin + H2O <=> Rhodovibrin Confidence Level: 3
fast: false
reversible: true
name: hydroxyneurosporene synthase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_8655a33e_2ebb_4146_b2bf_fe6c1b15ca89
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: GMP[e] <=> GMP[p] Confidence Level: 1
fast: false
reversible: true
name: GMP transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#c0867219_3145_4927_9c26_b55c64118879
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_44a5d370_cf63_4dc2_bcdb_44467f6c3b75
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-1-Aminopropan-2-olO-phosphate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#cce57e92_584b_4fc0_8c6b_6a74e9142b6e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f9f78a99_6dfc_48db_9d1f_84af3b052d34
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_14c695d7_7eee_49ab_bdd7_8ffa2d4a9c8d
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0b89e572_2845_4444_9766_3497ec88c1f7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: dTMP[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_52ae4036_7161_464f_bf4c_8fa754c07f23
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b3aee76a_68f7_4b33_af42_e287f0566019
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c68dd834_dbe4_48bb_b260_b9da12549526
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_48ce30e3_0663_4bf4_948b_579d0ceeb50d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2e7b7614_c918_43c1_a0b3_0a5e126599d5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8d701a1e_cc85_4cd7_a065_fd3c13eddef7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a15c0283_6854_4209_badd_910f33cec296
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_20c203c9_3ead_48a5_a80e_002c7541e8b7
notes: GPR_ASSOCIATION: RSP_3074 or RSP_0176 GENE_LIST: RSP_3074; RSP_0176; SUBSYSTEM: Valine, leucine and isoleucine biosynthesis Equation: (R)-2,3-Dihydroxy-3-methylbutanoate <=> 3-Methyl-2-oxobutanoic acid + H2O Confidence Level: 2
fast: false
reversible: true
name: dihydroxy-acid dehydratase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_93c0d39c_66f1_4979_9369_949766856e91
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8c144e32_3363_44d6_824f_dbea1b4b76aa
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_321b1851_014d_4ba1_82f0_245c0acdef31
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a124c202_a3cf_4b66_8e4b_8a710680db10
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_22d04b23_fabc_4753_94c8_ac40980ce259
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4ef85ab7_1210_4b45_bf94_70e1dd03beab
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#cf28e3ef_841f_40fe_a390_90688aa70440
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c8e8e0ae_40bb_4029_a312_7192c0b1bf25
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a5a881a8_4215_4186_97a0_8e1f86c8c3ef
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8e57e21a_24f7_4f1e_b3e3_eb505fe7a891
notes: GPR_ASSOCIATION: RSP_2326 or RSP_2098 or RSP_2978 or RSP_1355 or RSP_0550 or RSP_0582 or RSP_1145 GENE_LIST: RSP_2326; RSP_2098; RSP_2978; RSP_1355; RSP_0550; RSP_0582; RSP_1145; SUBSYSTEM: Peptidoglycan biosynthesis Equation: Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-D glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine <=> di-trans,poly-cis-Undecaprenyl diphosphate + [GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-g-D-Glu-A2pm-D-Ala-D-Ala)]n- diphosphoundecaprenol Confidence Level: 2
fast: false
reversible: false
name: peptidoglycan glycosyltransferase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#cba6b5e2_e041_4099_8ff8_8da65bbe84da
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f22e0ef5_358f_42a2_880f_63bcb94e2de1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#cb7ea364_1f5f_46ea_9d5e_7b65b2ddc51a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#febd3f07_953e_4b4b_b5c6_77c16bdd8041
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_86bc69cd_1541_4d2a_806b_9b2d0ace54ff
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bbe67e20_f373_4f3d_80e8_9a843cc41bba
notes: GPR_ASSOCIATION: RSP_2495 or RSP_3547 GENE_LIST: RSP_2495; RSP_3547; SUBSYSTEM: Pyrimidine metabolism Equation: dUDP + Thioredoxin disulfide + H2O <=> Thioredoxin + UDP Confidence Level: 2
type: Reaction
name: ribonucleotide-diphosphate reductase
fast: false
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#_356c53de_64aa_4ad0_a477_4662bfa625d6
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7bf337ef_1aa0_4d91_a10d_1b2b6da887c5
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1e09ac9f_679a_40eb_ac1c_b61e251fb086
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1cf6d249_db32_4ff3_b509_d11c9db7e44b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0bc4e6af_4df8_4631_a7ec_2d79aabe088d
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Selenocystathionine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_57baa232_9279_44cd_b93f_c78cbd51bde8
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d2809857_df8e_4d94_af60_334a9115835b
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0dc427c5_bd05_451b_8c8e_28763b86eac5
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a946f66a_d1a7_4784_b2ec_4edf06f59843
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8aee1d26_a209_4869_9554_743ad02e5af9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_26a1b860_609c_4a22_8d3b_79c8f7c20cfb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1f8d0571_f9e8_4083_bd05_1bd80b1b556d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0c5fb7f9_8b86_4a2e_9a53_60e74b438c09
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: 2-Hydroxybutanoic acid[e] <=> 2-Hydroxybutanoic acid[p] Confidence Level: 1
fast: false
reversible: true
name: 2-Hydroxybutanoic acid transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#b608b318_312b_4a52_9e19_e502ebeba5ac
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a9fa0bb0_241e_4fe4_9eb8_a0c616f38c5d
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6e429745_c043_4182_b331_43298e79b6e1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b878fb29_f552_43cb_b8f4_11f8d9a60b6a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_878586d0_d1c8_4276_a69b_07459af8914b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d16fc7df_1bcb_40f2_8710_f9215075f3a4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c381820e_11ac_49cd_87f6_e7fa74fc7253
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Mannitol[e] <=> Confidence Level:
fast: false
reversible: false
name: Mannitol exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#a4813dd6_a6cc_48ab_8b26_36db5907ba9e
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ca6fcb80_7f39_427f_a49d_e6c6ca4d6cdd
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2be5b399_ee36_492d_bb9c_a26250fac782
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_96194260_c758_46cb_a03c_77dc9c7803ed
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Hydrogen
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_0948fb90_3481_498c_8d39_32d573da0fea
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_42649f7c_d0e4_47b6_8454_af7844d5c8f6
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bf1a506a_020b_4fcb_aa58_0cfd42076d48
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Photon[e] <=> Confidence Level:
fast: false
reversible: false
name: Photon exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#b203acef_c641_4720_84b6_923c80eab67e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b15d4a7b_538c_4c4c_a276_9f201147474b
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Isoleucine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_8cc62c0b_25eb_4827_9a7e_a5439930978c
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Nickel[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_2f289a20_992b_4388_8608_f35ed7e05bee
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2fcf6764_6f81_4e1f_89f5_a96b7e2dac4a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_02bc17e9_f81a_4fe8_b522_86602fb3da4f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_22a8cad1_736c_45f9_befc_ff5f060d20a5
type: Reaction
reversible: true
fast: false
name: phospholipase D/transphosphatidylase
notes: GPR_ASSOCIATION: RSP_0113 GENE_LIST: RSP_0113; SUBSYSTEM: Glycerophospholipid metabolism Equation: Phosphatidylcholine + H2O <=> Phosphatidate + Choline + H+ Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#_34d375e1_cc37_4d5d_b1a8_d02f5a4a6570
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_75ab383d_503d_4d1a_878f_2a02db9da5e6
fast: false
notes: GPR_ASSOCIATION: RSP_1836 GENE_LIST: RSP_1836; SUBSYSTEM: Purine metabolism Equation: 1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide + Diphosphate + H+ <=> 5-Amino-4-imidazolecarboxyamide + 5-Phospho-alpha-D-ribose 1-diphosphate Confidence Level: 2
type: Reaction
reversible: true
name: adenine phosphoribosyltransferase

http://identifiers.org/biomodels.db/MODEL1304240000#_9b5f7177_5a99_47ab_8490_0504f8b8b9af
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_53a870a1_6415_41c2_88ef_31f5539a5d4d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c6b8cbca_7f09_423f_aeb4_b9a07b8ca64f
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Gly-Glu
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_27826880_ba44_46b0_8089_325c0d5e8ccd
fast: false
type: Reaction
reversible: true
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Porphyrin and chlorophyll metabolism Equation: Precorrin 3A + Oxygen + NADH + H+ <=> Precorrin 3B + NAD+ + H2O Confidence Level: 1

http://identifiers.org/biomodels.db/MODEL1304240000#e5d4ee58_5064_440f_8187_5f7e86d36b37
stoichiometry: 0.00834
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3f7a1fce_001a_474b_83b6_43b289ea9802
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_85ddd54d_7bc1_4f37_af5c_18e2d3407dd4
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_32dd5248_bf5c_444c_a184_af9e3b74b602
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f7a605e9_f814_42fd_8c03_95b87142bfea
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ef9c1e05_56fc_4bbd_98ae_f2b11ad94e4a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_704c00c6_bee0_4ffa_b742_71335d20e762
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2a802c15_aff5_42f1_9419_acaa5b657603
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7871f147_ee16_4f7c_8960_98cd57a41de0
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-4-Hydroxyglutamatesemialdehyde
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_4befb6ab_8996_4ee4_93b4_3d291fff0c14
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0809a4ed_b205_4357_99d3_7a522f3e7883
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c74dca3c_fb56_493b_a112_62200a4e6c5c
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Histamine[e] <=> Confidence Level:
fast: false
reversible: false
name: Histamine exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_4cd2d6e9_1ee1_4ecd_bb57_0ede6e2a24c0
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Magnesiumprotoporphyrinmonomethylester
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_39542977_1e78_4762_9fb6_b8d018f3cb91
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Glutamate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_8923fd12_3cf7_447b_b480_ac0429966da8
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_12c20935_74ff_402f_b01d_abf232290783
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d5eb8429_4f80_4b55_ae90_cae5fc4bf345
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_928a75a0_7c1f_4e4b_86e4_e8827f64aea0
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Ribulose5-phosphate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_7b35c999_bdcb_470a_bb3c_fa4aea554c2b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e4c1fe9b_ba5e_4cbe_9368_bff5a1453d8a
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Phenylalanine[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#ab7e666d_e58f_485a_884a_eca9cc77f6c8
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_6cc1b84a_b46c_4ba1_baa8_e51eb087eeba
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fc3a4924_2b80_42b9_834c_4beefe6d9fe2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_59ca1a65_4b0a_4f2f_9bb1_19a113965653
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0c4db3b7_1177_4fcf_8556_a6f7818e7399
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7d0ef780_07c0_47f5_be2e_5e68fa217449
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4a94081b_7d85_404f_ad6e_b2a2202244f8
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9e0e0e4d_1b01_4e2a_9577_fb59351082ab
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4183b7b6_91dc_4fb8_bfc7_47f96725211d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c94982fc_ae0c_4d13_bf85_c26b8b61b906
notes: GPR_ASSOCIATION: RSP_0934 GENE_LIST: RSP_0934; SUBSYSTEM: Glycolysis / Gluconeogenesis Equation: 2-Phospho-D-glycerate <=> 3-Phospho-D-glycerate Confidence Level: 2
fast: false
reversible: true
name: phosphoglyceromutase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_150c12fa_35b4_443a_8f60_f454e12349d0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_829f055e_1dc2_41c2_ab08_4b4448af6d9b
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_82036bcd_691a_42ab_8d18_a9f443b54df9
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b20adc52_d604_44ac_9390_542e729f8cbf
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1bbd31b3_3b7b_46ee_86c4_7a1658c73f84
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_73e83608_1bbe_4f33_b7dc_4b8dac960432
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b52ea85c_08d4_4c23_9d9b_30246d9e143e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e60cedbd_a750_4371_a6de_8a8179ae0fa2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_83aedf20_31fe_4a35_b593_cb9458bcfe80
reversible: false
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: D-Glycerate[p] + H+[p] <=> D-Glycerate + H+ Confidence Level: 1
fast: false
type: Reaction
name: D-Glycerate via proton symport

http://identifiers.org/biomodels.db/MODEL1304240000#_0ce8815c_2de1_4821_b079_c798854647fc
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3904c487_c341_4b0b_874e_170c6342a104
fast: false
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Alternate Carbon Metabolism Equation: Glycerol 2-phosphate + H2O <=> Glycerol + Orthophosphate + H+ Confidence Level: 1
reversible: false
type: Reaction
name: Glycerol-2-phosphate phosphohydrolase

http://identifiers.org/biomodels.db/MODEL1304240000#_611fa09f_03b0_42fe_b3cf_e3b50dd87af7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e97f6d6e_0213_4dfc_8fba_1a864ba1f5d5
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_06ca3d5b_b45d_449f_8344_f8009626ec0d
notes: GPR_ASSOCIATION: (RSP_0804 and RSP_0805 and RSP_0806 and RSP_0807) or (RSP_0803 and RSP_0805 and RSP_0806 and RSP_0807) or (RSP_1451 and RSP_1452 and RSP_1453 and RSP_1454) or (RSP_3524 and RSP_3523 and RSP_3522 and RSP_3520) or (RSP_3525 and RSP_3523 and RSP_3522 and RSP_3520) or (RSP_3248 and RSP_3249 and RSP_3250 and RSP_3251) or (RSP_3255 and RSP_3257 and RSP_3258 and RSP_3252) or (RSP_0704 and RSP_0703 and RSP_0702 and RSP_0701) or (RSP_3231 and RSP_3232 and RSP_3235 and RSP_3236) or (RSP_3231 and RSP_3232 and RSP_3235 and RSP_3235) or (RSP_2702 and RSP_2700 and RSP_2701 and RSP_2703) GENE_LIST: RSP_0804; RSP_0805; RSP_0806; RSP_0807; RSP_0803; RSP_0805; RSP_0806; RSP_0807; RSP_1451; RSP_1452; RSP_1453; RSP_1454; RSP_3524; RSP_3523; RSP_3522; RSP_3520; RSP_3525; RSP_3523; RSP_3522; RSP_3520; RSP_3248; RSP_3249; RSP_3250; RSP_3251; RSP_3255; RSP_3257; RSP_3258; RSP_3252; RSP_0704; RSP_0703; RSP_0702; RSP_0701; RSP_3231; RSP_3232; RSP_3235; RSP_3236; RSP_3231; RSP_3232; RSP_3235; RSP_3235; RSP_2702; RSP_2700; RSP_2701; RSP_2703; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + Gly-Met[p] <=> ADP + H+ + Orthophosphate + Gly-Met Confidence Level: 1
reversible: false
type: Reaction
name: ABC Gly-Met transporter
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#d1709236_2b0a_4aa7_9fbb_647aaeb3f7dc
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 13(1)-Hydroxy-magnesium-protoporphyrinIX13-monomethylester
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_40bc701e_230b_4228_b8e4_ac9a36792438
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-trans-Dodecenoyl-CoA
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#e815b8ff_19bf_4e43_bca0_ba3d1efa7206
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6b413e3d_9861_4ee4_8ef0_d6a28578b69c
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Glycolate[e] <=> Glycolate[p] Confidence Level: 2
fast: false
reversible: true
name: Glycolate transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#aab15789_df88_4399_9ebf_3cc3303bf200
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#da10185e_9cee_4542_8551_40b5a0bb3f9b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_257a59e0_b2b6_4a0c_a043_1b7ea50b1ac3
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_162d38c9_002b_4f62_9a6a_8611e2ab083f
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_06084f62_e963_40c8_b14c_025dfb8ace54
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_28d5a757_1162_4411_99f8_81299b22c470
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2ed973f2_580d_4fbb_8339_64c03ffc3028
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_89f6b516_0d85_47c1_958b_3e1dc2642bb5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c21161b7_3008_4126_a548_d7b88c8ae965
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_89c855c8_26a8_46b2_acc6_6ab80e667274
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d62698b0_d003_40db_b653_a835d7237c2f
notes: GPR_ASSOCIATION: RSP_3074 or RSP_0176 GENE_LIST: RSP_3074; RSP_0176; SUBSYSTEM: Valine, leucine and isoleucine biosynthesis Equation: (R)-2,3-Dihydroxy-3-methylpentanoate <=> (S)-3-Methyl-2-oxopentanoic acid + H2O Confidence Level: 2
fast: false
reversible: true
name: dihydroxy-acid dehydratase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_063d871d_4e1d_4bda_b983_a83c547d9d81
notes: GPR_ASSOCIATION: RSP_0985 GENE_LIST: RSP_0985; SUBSYSTEM: Purine metabolism Equation: Adenine + H2O + H+ <=> Hypoxanthine + NH3 Confidence Level: 2
type: Reaction
name: adenine deaminase
reversible: false
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_0942ce91_4d39_43a4_be4e_c64240a79d35
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: NH3[e] <=> NH3[p] Confidence Level: 2
fast: false
reversible: true
name: Ammonia transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#b8558b21_86df_45d2_949b_97041ac12750
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b71a59bb_8b08_4b0a_bf63_b78a0eec7a61
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_257a8811_b782_4f3d_bd30_7021f90a8083
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3c9e74ae_7c14_42aa_a57b_2b4f9059dda0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_738147e0_31d3_465c_a1d5_50d65d4bfb4e
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a2e3d11c_3fb4_412f_80e0_27859c17d283
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d4999f3f_1592_4a39_8d0b_e5b483426833
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0a4485f3_3d22_4af5_8b0f_98a4b9b5c30e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_729d94bc_334f_44da_99fd_9225865db3ac
reversible: true
name: 3-hydroxyisobutyrate dehydrogenase
type: Reaction
notes: GPR_ASSOCIATION: RSP_0154 or RSP_3171 or RSP_2846 or RSP_2196 GENE_LIST: RSP_0154; RSP_3171; RSP_2846; RSP_2196; SUBSYSTEM: Valine, leucine and isoleucine degradation Equation: (S)-3-Hydroxyisobutyrate + NAD+ <=> (S)-Methylmalonate semialdehyde + NADH + H+ Confidence Level: 3
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_4e79b26c_de34_4979_83fe_cadbf798dbf5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f9f63cbf_b042_41f2_aa0a_2fc2456c2d11
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1e342636_38a9_4693_b319_29aa8176e75b
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: 4-Aminobutyraldehyde[e] <=> 4-Aminobutyraldehyde[p] Confidence Level: 2
fast: false
reversible: true
name: 4-Aminobutyraldehyde transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#dd5b791a_e12f_4943_9eed_0fcf02a491b1
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c57fedbf_0241_43f2_88f3_12d7ac0bf5d4
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#aef2c06d_bbac_4d21_989e_a1a9f6641724
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_35da14ea_961f_4a2f_a9cb_f6dc0ffa72a3
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_81fe1dcc_3763_4a91_89ab_8889250b7e36
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Dextrin[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_30ae9c55_c6da_4f43_9078_0c58c638adb9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_648bd7dc_afa0_490d_8499_dbc0dca5481f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_12869522_2467_40f0_9efa_7984a3f5c38d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_473bfa70_b4e5_4462_8592_ab6dfb4c45e3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: tRNA(Arg)
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_1e8c2847_5bf9_4b98_8a49_19b8babf12a5
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e833c58d_4a19_48b8_9267_38646724a1b2
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4568956c_e54c_4e62_956c_b0c06d0fc9c7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f306906f_daf7_4b1a_8b8d_ea049f31ccec
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_95cc0e16_3bef_4ba9_8f0f_7abe25e2e1e1
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ce6243ae_d332_40fa_86ef_5a05594dd890
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_93b3ef43_04c8_4641_9386_1783c44a7d1d
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Butanoic acid[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#d7e0f63b_c4b2_4ca8_8e47_a5937936f24b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c9e660a7_3fa0_4be8_803e_7e7ba06208ea
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1e21f3cb_0b6e_4893_8c86_11211e8d8930
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e27c9a75_581e_4af2_bdca_9e451ed0cb6a
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5dc242b1_23a6_4b63_a78d_8f39503754f2
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bbf79108_a539_4c04_88eb_bad00d950090
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_047a8ddc_5269_48fe_868d_a6f8b43797af
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a84e6540_671e_40ba_97c8_e8b2a1194be6
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fea47f29_7c1f_409e_9067_fa29612152f6
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: L-arginine[e] <=> Confidence Level:
fast: false
reversible: false
name: arginine exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#b0113800_4f12_46dc_92c9_441f9b133667
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a6b6a77f_7ace_4a83_99aa_560d19216649
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1f06befc_0d64_4d3c_928e_3872d1c71a6a
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b8354f57_d392_4288_9706_b1d4a1d7b961
type: Reaction
notes: GPR_ASSOCIATION: RSP_3566 GENE_LIST: RSP_3566; SUBSYSTEM: Glycine, serine and threonine metabolism Equation: N,N-Dimethylglycine + FAD + H2O <=> Sarcosine + Formaldehyde + FADH2 Confidence Level: 2
name: dimethylglycine dehydrogenase
reversible: true
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_6e4c5436_ab2c_4dbd_978c_2ec312d7f9f4
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ae8fa884_b34f_4dbe_9ec3_4fd82c86a02a
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Galactonolactone[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#e79c3fae_27ac_4227_a042_c4eae9d751e8
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Arginine phosphate[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#f363fbba_13f3_4754_a477_3b61ec77be6f
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Creatine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_66aa2606_eb7a_423f_add1_160631378f30
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_257504f8_fb58_4650_a3a4_d5d61c519105
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ec8773a3_f442_40a6_a427_7f3c3786e925
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b690dbdb_a026_46e7_820d_38a47d594024
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7eadf70c_64e2_4707_9b3e_977bd1f88344
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_71eebee2_2af5_4ab1_a2f1_7983c2adaa02
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_27af617b_1cab_4053_ae85_3278d0c3013f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_58102deb_8a2a_4fd5_96c6_abd29ec5f6a9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a2d7298c_7c66_4414_87b6_0056ec09ad46
type: Reaction
fast: false
reversible: true
name: pantothenate kinase
notes: GPR_ASSOCIATION: RSP_2533 GENE_LIST: RSP_2533; SUBSYSTEM: Pantothenate and CoA biosynthesis Equation: ATP + Pantetheine <=> ADP + Pantetheine 4'-phosphate + H+ Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#_2d7272fb_7131_4c20_9ef2_690e28ebc804
notes: GPR_ASSOCIATION: RSP_2982 GENE_LIST: RSP_2982; SUBSYSTEM: Terpenoid backbone biosynthesis Equation: 2-C-Methyl-D-erythritol 2,4-cyclodiphosphate + Reduced ferredoxin + H+ <=> 1-Hydroxy-2-methyl-2-butenyl 4-diphosphate + H2O + Oxidized ferredoxin Confidence Level: 2
fast: false
type: Reaction
reversible: true
name: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase

http://identifiers.org/biomodels.db/MODEL1304240000#_71c68207_1e12_4f80_8c51_7dfd2da15658
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1fdea81e_3eab_4559_9bad_359a549b37a2
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#eda652da_eb7d_4cec_bca2_344b76e2b07a
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Sorbose1-phosphate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_080599d4_324b_44b1_8b3f_2747d81d01aa
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_14311b1a_b820_488c_88f4_13398ba31ce3
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8b92f2d5_d0f8_48c4_9c18_5a7b7ba1aa7f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2397753c_2753_41db_805f_6f44f5a3e7bf
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#dbad3f21_81d6_4ef3_9a4d_de4d4122434b
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_14e39adc_6817_44f8_a703_49976acc2708
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d014c211_61ae_4dd9_8d22_feff9380b7bc
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_997396a0_aed6_4b06_a1d8_2cfc39ca502b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_98319e89_f57a_4587_a56c_c6ddc47e9fde
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d3c49abd_b7db_4d54_8a38_536140cd1efb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#edab011d_c41e_4c3a_b17f_c730e1ebf62d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_25c57fcb_a420_49e8_99c4_75246db417ab
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f571b3c6_7ed4_43d7_b79c_b8a26768c351
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_611353f5_22b4_46c4_9c71_0ab5900cc366
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Octaprenyl-6-methoxy-1,4-benzoquinone
type: Species

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Glycine[e] <=> Confidence Level:
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reversible: false
name: Glycine exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_55906c0f_46e0_4084_950d_5de4fae95729
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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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type: Species

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Hippurate[e] <=> Confidence Level:
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type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_1ba3d7ca_672f_469a_980c_05d33469b472
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type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: L-Alaninamide[e] <=> L-Alaninamide[p] Confidence Level: 1
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reversible: true
name: L-Alaninamide transport via diffusion
type: Reaction

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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boundary condition: false
has only substance units: false
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type: Species

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reversible: true
name: Cysteine racemase
type: Reaction

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type: LocalParameter

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type: Species

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: SpeciesReference

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notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: (R)-Lactate[p] + H+[p] <=> (R)-Lactate + H+ Confidence Level: 1
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fast: false

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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fast: false
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name: L-Alanyl-Glycine dipeptidase

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type: LocalParameter

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type: LocalParameter

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notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Demand reactions Equation: Glycogen <=> Confidence Level: 0
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name: Demand reaction for Glycogen
type: Reaction

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_62385a39_cda0_4dec_98d1_fac7737aff7d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f8a67350_6ed9_4ec4_a82b_38e0994cc9b0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_32348351_fefc_45c5_ad79_6fdacd15071c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d1b0fe04_72fe_41bb_a45b_5d52b6478c4a
name: tyrosyl-tRNA synthetase
type: Reaction
reversible: false
notes: GPR_ASSOCIATION: RSP_4041 GENE_LIST: RSP_4041; SUBSYSTEM: Aminoacyl-tRNA biosynthesis Equation: ATP + L-Tyrosine + tRNA(Tyr) <=> AMP + Diphosphate + L-Tyrosyl-tRNA(Tyr) Confidence Level: 2
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_85a125ab_35d7_48d1_9cb3_bb7fdcde5ff7
stoichiometry: 53.615732887
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_43a415f8_6b54_4343_81ad_a025c023f210
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d4ea795a_a3c8_4214_9198_0270ebedb615
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ac8a09ac_bd11_4a1e_a741_e4139cf076e9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#eb215538_dcf0_4435_934c_96d4340ec597
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5ffcc9ba_aad6_4250_aa5a_128a7e6fb30f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4bc1720a_1324_4e92_8841_00fafcc81b08
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9f1e23fa_87f7_4360_a4dc_fe4453eb3c9a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_823cd2eb_a3ef_4379_ac71_a4ea64f826b2
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d5cd5c6a_d641_4f61_9471_b3d3fc7ea363
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_74689e1e_4e44_40aa_a0e8_132545755779
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2c2c8e8f_ffc7_47a8_85b7_d7d480a66126
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_69ed3d8b_645d_4a3e_ae55_f146ed348899
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_791f54a7_c33e_446f_8fd7_e53947ab295c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c4411ae7_3be1_48e6_aaae_c76239d35584
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5a6eff53_199f_40cd_b3b8_a8bee6620590
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#acd2fdf9_74a3_43c5_9812_6bc22a1389ba
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5574f269_2d6e_45f3_b038_56f4aba00e96
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f0e11d68_56fd_43ef_9ec1_a3f0e5cbdba5
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b225441e_5d9e_4722_93db_7717374c0acb
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Lysine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_5e4e6529_a3eb_41a6_ae24_c9f4c5643467
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4ac00c5e_02bc_42a3_8ae8_334bee3e24a0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#cf4702a2_d802_4bb1_961d_4928134ecbc6
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9fcdf8ea_7065_4ead_9302_863b574a57cf
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_69690790_e6c2_4c23_bd44_aa705d922fdc
notes: GPR_ASSOCIATION: RSP_2503 GENE_LIST: RSP_2503; SUBSYSTEM: Amino sugar and nucleotide sugar metabolism Equation: UTP + N-Acetyl-alpha-D-glucosamine 1-phosphate <=> Diphosphate + UDP-N-acetyl-D-glucosamine Confidence Level: 2
type: Reaction
reversible: true
fast: false
name: bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase

http://identifiers.org/biomodels.db/MODEL1304240000#_8755132c_7ab3_4bb7_ac36_841e6a284cbb
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_13e83096_83eb_4af5_a7c0_71023493d1ac
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Cytosine[e] <=> Confidence Level:
fast: false
reversible: false
name: Cytosine exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#d602b1d1_f068_4b4b_96a5_a3f3bbe53981
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_219e4b02_433e_4c66_bc2b_4773306404f5
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ce8fba1f_0097_409d_9a91_db74a192c840
notes: GPR_ASSOCIATION: RSP_2196 GENE_LIST: RSP_2196; SUBSYSTEM: Fatty acid metabolism Equation: (S)-Hydroxyhexanoyl-CoA <=> trans-Hex-2-enoyl-CoA + H2O Confidence Level: 2
fast: false
reversible: true
name: enoyl-CoA hydratase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#dc7e0d0d_f468_4fcb_ab06_6bd24611e92e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9eb7b598_d65f_4591_b7bf_1e118b6d900d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_590ad6a1_1f2a_4e15_9338_b2c539dfd877
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3243e96f_2656_4951_b0a8_38ae4768153b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#eeb59c3e_4b64_4be7_8dea_bb3c8d09af07
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7a47ce76_d5cd_448f_a0fa_4f33f708c9fc
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bd7aeb21_1e0b_49f7_bd2e_50edbc7cb84d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7a855850_e9ba_4d36_92fa_fcfe243d323e
type: Reaction
fast: false
name: Methylsuccinyl-CoA dehydrogenase
notes: GPR_ASSOCIATION: RSP_1679 GENE_LIST: RSP_1679; SUBSYSTEM: Propanoate metabolism Equation: (2S)-methylsuccinyl-coA + FAD <=> Mesaconyl-CoA + FADH2 Confidence Level: 1
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#_11470079_ed05_418c_8c32_b45839a7cea8
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9659cc68_831f_4005_98ec_3bd72dbdb5c2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e77aa5c5_a293_4135_befa_1a4dd10d130c
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_300ed7d8_7b1a_4ba9_b153_6fd1c596c0a4
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_725b7113_22fa_4f68_a73b_1994c7ec70df
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a460a8e4_f85b_4d53_8614_2c542d9006c5
name: succinate semialdehyde dehydrogenase
reversible: true
type: Reaction
fast: false
notes: GPR_ASSOCIATION: RSP_1012 or RSP_4032 GENE_LIST: RSP_1012; RSP_4032; SUBSYSTEM: Alanine, aspartate and glutamate metabolism Equation: Succinate semialdehyde + NAD+ + H2O <=> Succinate + NADH + H+ Confidence Level: 4

http://identifiers.org/biomodels.db/MODEL1304240000#_9ec75c64_e2de_4136_8656_b4f6eef2a862
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_94030adf_7c67_444a_bb26_53758977f4ec
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Ubiquinone and other terpenoid-quinone biosynthesis Equation: Chorismate <=> 4-Hydroxybenzoate + Pyruvate Confidence Level: 1
fast: false
reversible: false
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_177129a0_f84e_46dd_bbfb_8fe0a0fff023
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2fffc8b8_3323_465e_8707_53ced27f7ede
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f25b6a15_461b_48d0_ba43_dfe3c2850c08
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fc873713_c194_4b86_931b_29ff259701cb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_089ef996_466d_4d18_ae88_4aa92f0a15a2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#be38c6f6_ac2c_4602_9e54_0e556d17e2c5
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#beec8147_8497_46ec_8364_fd1d66e4bc67
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8b38d77a_4eef_4815_9d28_86097df6f0c4
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b7dae1c7_1f76_4cfa_afc8_4a604e57971d
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Glyceraldehyde[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#d0460dfc_effc_4118_adb0_a00da3fb2010
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Benzoate[e] <=> Confidence Level:
fast: false
reversible: false
name: Benzoate exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_5c36fde1_170a_4282_ae18_7c4f6fe55c58
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5f99b136_b2fa_442d_bfe6_279601fca425
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fd44ee5e_59b1_4642_a7ff_4cb2e61f09ad
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b26bd119_b478_4a35_867d_5e2e6fd0031d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4bbbd157_c9b6_4f6d_aad8_7ebe127794e3
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_26ae8e68_11df_46ae_ac92_13c663a85835
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_22c41155_c843_453d_a33b_71e4e9d4821e
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Creatine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_179a2004_af46_47bc_b1ef_5c43004967b3
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: O-Phospho-L-serine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#e341ba37_f1f6_423e_b738_b76ffb522a73
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_546eda54_6f59_41e2_b705_3347276264b0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d3c58462_7e5b_4bd9_a674_ae9069372889
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7eb2b83b_37a6_4bbc_aae1_408b95c84044
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Altronate[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_66d202ea_2573_4b10_a096_1563f2058207
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a997c645_0693_4b70_96d9_2d6b7fe36c3b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_07c05e5c_5d7d_44ce_a210_cfa16b11e5b7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0a234a01_df71_45a7_81b3_2ea3fa72ef0f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d8227953_a45c_41e2_ad7f_c4d47992d35c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_02617582_8bcf_4841_9c06_08d1952de910
type: Reaction
name: putative phosphatidylglycerophosphatase A
fast: false
notes: GPR_ASSOCIATION: RSP_2834 GENE_LIST: RSP_2834; SUBSYSTEM: Glycerophospholipid metabolism Equation: Phosphatidylglycerophosphate + H2O <=> Phosphatidylglycerol + Orthophosphate Confidence Level: 3
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#_045e1455_5ba5_4045_8a66_a135b7f9412c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8ff3c739_68e9_4161_8a01_a04e13b55b1a
reversible: true
type: Reaction
notes: GPR_ASSOCIATION: (RSP_0100 and RSP_0101 and RSP_0102 and RSP_0103 and RSP_0104 and RSP_0105 and RSP_0106 and RSP_0107 and RSP_0108 and RSP_0109 and RSP_0110 and RSP_0111 and RSP_0112) or (RSP_2512 and RSP_2513 and RSP_2514 and RSP_2515 and RSP_2516 and RSP_2518 and RSP_2521 and RSP_2522 and RSP_2523 and RSP_2525 and RSP_2526 and RSP_2527 and RSP_2529 and RSP_2530) GENE_LIST: RSP_0100; RSP_0101; RSP_0102; RSP_0103; RSP_0104; RSP_0105; RSP_0106; RSP_0107; RSP_0108; RSP_0109; RSP_0110; RSP_0111; RSP_0112; RSP_2512; RSP_2513; RSP_2514; RSP_2515; RSP_2516; RSP_2518; RSP_2521; RSP_2522; RSP_2523; RSP_2525; RSP_2526; RSP_2527; RSP_2529; RSP_2530; SUBSYSTEM: Oxidative phosphorylation Equation: Ubiquinone + NADH + 5 H+ <=> Ubiquinol + NAD+ + 4H+[p] Confidence Level: 3
fast: false
name: putative NADH dehydrogenase I and II

http://identifiers.org/biomodels.db/MODEL1304240000#_6bdc5b10_d3d5_4dc7_bba2_d3ff2b7f95a0
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Alanyl-D-alanine[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_149e26be_3174_4f13_9321_c60e98368963
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0b5be435_e995_4ecf_ace4_5808778eee6f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_466baf54_12e4_473c_bea6_ab2d4e19430e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_84f19f4a_db7c_45f2_a07a_a5154a2574c9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1aac7904_a1a5_42cd_834e_6027ed267a84
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c23d5a9b_736c_45bd_9758_04af7289ba60
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_666ef27c_ac10_497c_88c5_2bceace43637
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f5e5e4aa_b96f_4ed7_8c0a_59efb9512ec3
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bbcee222_e97c_4bf3_b6ff_5f986699f467
stoichiometry: 8.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_565e11a9_703a_417c_ba75_950ee67e61d5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5a46d18c_b1c8_41f6_b07c_97cefdcefd43
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e38fc879_d0a5_4731_9915_0f85a0b55b08
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#dc2c94b5_40bc_4a1c_b808_8bef9b345e19
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: D-Galacturonate[e] <=> Confidence Level:
fast: false
reversible: false
name: D-Galacturonate exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_930f7e47_3b94_426f_88a7_9383533fc827
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: L-leucine[e] <=> Confidence Level:
fast: false
reversible: false
name: L-leucine exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#da060939_c2c0_42ad_abb9_826619894655
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d2f61d04_be1a_4510_a9a5_46ca59e102eb
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6ed9d880_f0f7_46a5_9e08_e2c8f083300c
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5fad4de5_bff6_4a5c_a225_b6a67dc865d8
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_01ba3486_6208_40a1_88d0_e4b16972616d
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3bfcffaf_3eff_4a06_8052_1f4efee80d56
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_64a46268_8b3f_4493_940b_5feb97f68ba2
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_104e3567_db4d_43df_b267_ad70db5cbe94
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9b387d08_1e0c_4c3d_9fc7_b0b904f9596f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_86ee4c4e_accc_42d7_9b61_f5ea2a4e22ae
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#cc3e1d82_a4b0_4128_8499_16445e02fd26
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6c9d37fc_7d22_44e8_ae51_f891d6084cf9
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_66f1792f_3f3d_4d97_b307_a88adff99281
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c2a8d4b2_ecfd_42a8_8189_1decff30d342
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_908d1c0f_1927_4dd6_a8d3_b1c4c8520e17
stoichiometry: 1.0
type: SpeciesReference

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type: LocalParameter

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type: LocalParameter

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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: SpeciesReference

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type: Reaction
fast: false

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type: SpeciesReference

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notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Gly-Asp[e] <=> Confidence Level:
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reversible: false
name: Glycyl-L-Aspartic Acid exchange
type: Reaction

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type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Xanthine[e] <=> Xanthine[p] Confidence Level: 2
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reversible: true
name: Xanthine transport via diffusion
type: Reaction

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type: LocalParameter

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type: LocalParameter

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has only substance units: false
initial concentration: NaN
initial amount: NaN
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type: Species

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initial amount: NaN
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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_0366 GENE_LIST: RSP_0366; SUBSYSTEM: Purine metabolism Equation: GTP + IMP + L-Aspartate <=> GDP + Orthophosphate + N6-(1,2-Dicarboxyethyl)-AMP + 2 H+ Confidence Level: 2
reversible: false
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name: adenylosuccinate synthetase

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type: LocalParameter

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type: LocalParameter

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boundary condition: false
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initial concentration: NaN
initial amount: NaN
name: L-Methionine
type: Species

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: SpeciesReference

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type: LocalParameter

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value: 1000.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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type: LocalParameter

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type: SpeciesReference

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notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + L-Alanine[p] <=> ADP + H+ + Orthophosphate + L-Alanine Confidence Level: 2
reversible: false
fast: false
name: ABC L-Alanine transporter

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type: LocalParameter

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type: LocalParameter

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has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Phenylalanine[e]
type: Species

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type: SpeciesReference

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type: LocalParameter

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type: LocalParameter

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initial concentration: NaN
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type: Species

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initial concentration: NaN
initial amount: NaN
name: trans-2,3-Dehydroacyl-CoA
type: Species

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type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: N6-(L-1,3-Dicarboxypropyl)-L-lysine
type: Species

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type: LocalParameter

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type: SpeciesReference

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reversible: false
fast: false
type: Reaction

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initial concentration: NaN
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name: Geranyldiphosphate
type: Species

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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name: cysteine synthase
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notes: GPR_ASSOCIATION: RSP_1109 or RSP_2147 GENE_LIST: RSP_1109; RSP_2147; SUBSYSTEM: Cysteine and methionine metabolism Equation: O-Acetyl-L-serine + Hydrogen sulfide <=> L-Cysteine + Acetate Confidence Level: 2

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value: 0.0
type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_0990 and RSP_0989 and RSP_0988 GENE_LIST: RSP_0990; RSP_0989; RSP_0988; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + D-fructose[p] <=> ADP + H+ + Orthophosphate + D-fructose Confidence Level: 2
name: ABC fructose transporter
fast: false
type: Reaction
reversible: false

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name: Chitobiose[e]
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type: LocalParameter

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type: LocalParameter

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reversible: true
notes: GPR_ASSOCIATION: RSP_0264 GENE_LIST: RSP_0264; SUBSYSTEM: Carotenoid biosynthesis Equation: 3,4-Dehydrorhodopin + S-Adenosyl-L-methionine <=> Anhydrorhodovibrin + S-Adenosyl-L-homocysteine Confidence Level: 3
fast: false
name: hydroxyneurosporene-O-methyltransferase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_152499c4_863f_4a0d_8cdf_bbff6ccb8471
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_891dbd94_d5b2_4171_9f40_40a70ff7ff51
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8050ff91_ae6f_4a88_bcde_d2446b620d9c
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_838f4e49_c1de_4f6b_848b_7ae79a5122b7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ba6755f0_a069_4492_909a_7167a35b431c
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_35122ba8_189e_4003_a20b_b1fd5552c8f7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b5e4eeac_9012_4b84_8f0f_6c9b6ed894da
stoichiometry: 0.027828
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_791b32f3_fbe7_46d0_a0f3_5d89543e97eb
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7c909d1a_6ba3_429b_bc34_aeafb3635fcf
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1d1f4b55_49af_4df6_932b_b22c1e7f07e1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_863a84a1_699b_4860_9d15_657df5fede4c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_6fcdde72_974b_473a_bffc_cb7e923f9ce8
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a4fd5b4b_371b_4302_9bda_24833faea5ea
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b57d834e_ac41_4e27_8285_29954476f9d9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4f4b013d_5604_4d12_a2b0_433be35cf55e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_10035753_0b04_4f16_8c2f_c22e45247634
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8cbb02a2_6845_47e7_ae49_5e105d20293b
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8f28a22a_a520_4506_ab71_73825494adc0
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d5eb92a1_b35a_4044_8327_f9780877fd20
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_877b815a_4894_4cf2_8f70_e07b29f3482c
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b9e88742_57ce_47f0_8a20_d20020b8c6ac
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e731f279_de17_4b14_998b_83f66e0c354a
notes: GPR_ASSOCIATION: RSP_0156 GENE_LIST: RSP_0156; SUBSYSTEM: Fatty acid biosynthesis Equation: Tetradecanoyl-CoA + FAD <=> trans-Tetradec-2-enoyl-CoA + FADH2 Confidence Level: 2
name: Acyl-CoA dehydrogenase
type: Reaction
fast: false
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#_307902c6_d5e0_495b_bb29_f2b9622fd4f3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#eebd4a81_8d76_4f55_99c7_e87bfd257e1b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2f7daadc_ebca_4aa6_83e2_973bcfc74d86
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#cb3a6d5c_8304_4f09_b0a6_b7cb8f9769dc
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_844ba6df_6c1d_407c_ab54_3cedb8673254
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d1c8e7bd_b580_4157_a825_c8bbe3741baf
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8a2311a5_ed47_46f8_ae33_93a143c4b7ca
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d926a915_1b43_4d9f_90ec_5464511482d5
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5e7e843d_6bb8_478d_a3cd_e645e607cedc
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5b483bdd_e892_4ef6_bb24_77176b257fc5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_80c9dc91_ca8b_4ceb_b4fb_300827593d2f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d01a0bd3_a6e5_456f_9d55_7829efae7c17
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_98130f19_ee08_43d8_8efb_08f939766c19
fast: false
name: pyruvate dehydrogenase
type: Reaction
notes: GPR_ASSOCIATION: (RSP_4047 and RSP_4049 and RSP_4050 and RSP_2968) or (RSP_4047 and RSP_4049 and RSP_4050 and RSP_0962) or (RSP_3974 and RSP_4050 and RSP_2968) GENE_LIST: RSP_4047; RSP_4049; RSP_4050; RSP_2968; RSP_4047; RSP_4049; RSP_4050; RSP_0962; RSP_3974; RSP_4050; RSP_2968; SUBSYSTEM: Glycolysis / Gluconeogenesis Equation: CoA + NAD+ + Pyruvate <=> Acetyl-CoA + CO2 + NADH Confidence Level: 2
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#_33d0ab4b_4bd4_4e46_9996_fa4415c12472
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_43357b28_e133_4e8f_a4d4_5d49b030efb6
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_639a30f8_6f84_4e13_8b34_182ef6fbc659
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: dTMP[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_133a4c01_60d5_4b2c_81a6_76b5f736cfed
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a1cb8187_faee_4dfb_a160_99b952187765
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c221f1c4_4bf0_43c3_99bd_30e83c536c4f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f555b6f0_a286_4890_9c85_51d0198af45c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bcf2bed1_9654_4cc1_89c1_a5a57bebc2d5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_09775d9d_dfd0_4f1f_897a_162d3aee01b1
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fa97fa41_d439_48c9_8648_0fd41f9c8eb5
stoichiometry: 0.049752
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7bbb9d83_39ac_4e07_a802_fbfb152555d4
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: H2O[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_1a78c7f0_b67e_4b83_a4de_55795b759b74
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_65ebca9d_0865_4efb_8bfc_31d25142f203
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b20e7a3b_7f2b_4dc3_9bb4_c14dafb49a42
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_232afe26_0b10_4eaa_8312_370c8ee88470
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e59372bb_9b1c_45d4_8a1c_60dc2088abe9
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_85b844a5_afab_4de7_96a6_be13058debe6
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7b04e768_dfe1_419b_b658_4f18f2f2b0e2
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d2c6c9f0_f6f9_4205_be38_c9525808472b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bf725644_029d_4194_b308_2b3f85ae90e5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_6de72435_5f4e_4e13_93f2_69c27fc6115a
name: serine hydroxymethyltransferase
reversible: true
fast: false
type: Reaction
notes: GPR_ASSOCIATION: RSP_0823 GENE_LIST: RSP_0823; SUBSYSTEM: Glycine, serine and threonine metabolism Equation: 5,10-Methylenetetrahydrofolate + Glycine + H2O <=> Tetrahydrofolate + L-serine Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#_7addf246_1cc8_4578_b5db_d7b4f15fca10
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_48ff11b8_7284_45ce_ba6e_0d7788a887a0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_407d92a3_ed92_4626_b0ab_b7a016bb2ad3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_42046663_280e_4a4b_a645_38caf3857e92
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_503a5231_c314_4fac_991a_6c225d253887
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d583bb51_a4ee_4617_8363_1b2954c9e296
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7bc80e68_db6c_40f2_b934_8039cbacfff5
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4d62bfe3_36b4_495b_bc30_9219f99c1f9f
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Ala-Leu[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#bd3b49c6_c5ba_494a_a079_6a3f6248579e
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Mannitol[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#e07cb90b_9df0_4d50_8a0e_4b688a768e97
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e1f0ad54_0fec_4654_bea6_f367f9e11124
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_274d0432_d2ad_4d09_802e_8f70d52d8625
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ee816f30_3f4e_4abd_82dc_530c9cd486b7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bc3f1bad_16db_453e_a8bd_76091a0fcd2a
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a0ac3968_df67_4510_87c7_ecdb57c09762
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ef4db518_2b81_4b21_9e09_d3383e67a888
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2edaf3b4_548a_43e8_8fdf_6a7914282f23
fast: false
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: 3'-UMP[p] + H+[p] <=> 3'-UMP + H+ Confidence Level: 1
reversible: true
type: Reaction
name: 3'-UMP transport via proton symport

http://identifiers.org/biomodels.db/MODEL1304240000#_211d9290_1c6f_48da_98e1_b1029cba8d90
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Glutamate[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_4e852e37_1074_49d5_8c22_a17483b7e680
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7a075caf_5f57_40ba_b1e9_5c3719d14a13
name: hypothetical protein/gamma-glutamylputrescine oxidase
notes: GPR_ASSOCIATION: RSP_0378 GENE_LIST: RSP_0378; SUBSYSTEM: Arginine and proline metabolism Equation: gamma-L-Glutamylputrescine + H2O + Oxygen <=> gamma-Glutamyl-gamma-aminobutyraldehyde + NH3 + H2O2 Confidence Level: 2
type: Reaction
fast: false
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#_087d2f93_925f_458a_9251_01e2c6ee50ad
fast: false
type: Reaction
notes: GPR_ASSOCIATION: (RSP_3147 and RSP_3148 and RSP_3149 and RSP_3150) or (RSP_0974 and RSP_0975 and RSP_0976 and RSP_0979) GENE_LIST: RSP_3147; RSP_3148; RSP_3149; RSP_3150; RSP_0974; RSP_0975; RSP_0976; RSP_0979; SUBSYSTEM: Citrate cycle (TCA cycle) Equation: Ubiquinone + Succinate <=> Ubiquinol + Fumarate Confidence Level: 3
name: succinate dehydrogenase
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#cfc2e154_3455_4810_8d6f_abef3cf578e2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ac7ed7c1_69f1_417d_81e9_e62b2d7de838
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2f09bba8_93b5_473d_a820_5878fce86a94
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5275a934_9cf1_48ab_849f_5fb4ee996fd6
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ebdad879_86d9_4f01_90c1_fd66d2dc4765
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_16a518cf_0edd_4b06_847c_d89aac2188e6
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_16d27e99_b380_4716_a31d_a09de1910b45
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Glycyl-L-Proline[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_9e0ed8d4_0aef_4ae4_83fe_1d40012ec1bc
stoichiometry: 0.329246981199153
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d6e082c8_d0dd_457f_89e2_655c1b51a3bb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a4f35036_1900_420d_b3bb_483aff65b45f
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5bea56e5_e5a3_42a3_815b_7390b1cd7016
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bb2e6f02_edfd_43a6_a088_6c82e6cbd16a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_58506cac_d683_4fbd_a165_3470c00513b0
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Erythrose
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_13bfdc73_f640_4883_9a57_85f04e31c1de
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_38763562_4153_4403_9004_2007c29ef80f
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8eabc908_d345_47d1_a5a7_b9a34e02ad86
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1491916d_2cf3_459d_a139_6bfb5cf8eaf3
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e5b9b11b_0df4_4c9f_a55b_e304672f4359
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f5eba0d1_60a2_42e4_9f48_3a85582fb851
type: Reaction
name: lysyl-tRNA synthetase
fast: false
notes: GPR_ASSOCIATION: (RSP_0584 or RSP_0478) and RSP_4329 GENE_LIST: RSP_0584; RSP_0478; RSP_4329; SUBSYSTEM: Aminoacyl-tRNA biosynthesis Equation: ATP + L-Lysine + tRNA(Lys) <=> AMP + Diphosphate + L-Lysyl-tRNA(Lys) Confidence Level: 2
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#_4f55f50e_c9fd_46ee_aec9_fb7bd3c83f42
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ddf0c3f0_3dca_4e12_a8e6_ae71ef4a5b19
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fce19b86_1e10_45e8_889e_f330e4aceddf
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: dGDP
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#dd3659b6_2f89_4a89_b18e_9e9319f50a33
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_80ad77ad_6a3e_4bf2_853d_69d09bd64fd8
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_35e9cea2_3fed_4bdc_8d93_a6521c3b50a5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_628a864e_116d_486f_9281_f225bc17de64
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b3668585_93f9_4872_8131_3d9b7057f726
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bb8233c4_604d_49df_9830_f55e72f90e2d
stoichiometry: 4.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0ce6f339_a97d_4b21_8058_96766fcd5773
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1b6efcff_e4fd_4b61_949b_ffd3a11859f4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4f37104f_6842_4127_99d4_3fb7504c8029
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9bce25e4_b4ab_46e7_aefa_0af5e1e17627
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d480c811_3eaa_4579_a792_65569fd2a1a7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#df765bdf_1ea0_4886_a066_f1ae2c2f7f50
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c30b3cc6_2170_41d6_9f95_775ea9da067a
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Potassium[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_7270c493_0a65_413e_9fe8_1673cf518eb7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b14231d3_beda_4bdb_aebb_07e0fab22425
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a2aebf7f_e91e_4ab6_a13f_699e132fc440
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Dethiobiotin[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_678f82c4_ab17_40a3_a8fb_680fce76e3fb
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_768f0671_2dac_43f7_a113_28f033799939
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5e6f05d4_db5f_48d4_a343_2b0c5d962e79
stoichiometry: 0.459726340415114
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5a4049f0_02e5_4711_9817_475192d6cee4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_26c1929a_0ac2_4873_8fc4_54a728256aed
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#caae735d_4734_4cda_91e4_e3f484308010
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c1e2b733_67c8_4871_8046_566956e81177
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: 4-Hydroxy-2-oxoglutarate[p] + H+[p] <=> 4-Hydroxy-2-oxoglutarate + H+ Confidence Level: 1
name: 4-Hydroxy-2-oxoglutarate via proton symport
type: Reaction
reversible: false
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_62fc9fe7_90d1_4d48_ae53_f7b8eef0130e
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Ala-Gln
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_1f935bc9_5143_480a_9e20_1167332a7697
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_54a84f4b_3959_48b0_aaf6_335efc8b46ee
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_60d45547_cc07_40cc_9e96_5d3d8d93068f
reversible: false
type: Reaction
notes: GPR_ASSOCIATION: (RSP_1282 and RSP_1281) or RSP_3271 GENE_LIST: RSP_1282; RSP_1281; RSP_3271; SUBSYSTEM: Carbon fixation in photosynthetic organisms Equation: D-Ribulose 1,5-bisphosphate + Oxygen <=> 3-Phospho-D-glycerate + 2-Phosphoglycolate Confidence Level: 4
name: ribulose bisophosphate carboxylase
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_9641eb18_7d72_44e8_93ea_60baed97e760
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bab65d35_d204_4848_bab0_c8f438e626ea
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ff499487_7e72_4dd1_82ea_97f63cc71b72
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d9e53394_0dc4_4abc_9503_e31a45c89fa5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a1c3a7c4_ac76_414e_b4fb_0eb8b846c1cc
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Ala-Glu[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#aa4964cc_581a_4259_8d17_0c448b8bc9e6
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a9b2fc71_68af_4327_8390_2cca04c328da
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#cd6ac948_925b_4cd6_860d_1f333ce0fca5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#dd7bfbed_82ce_4b72_9a25_f636613d727f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1c397f71_0fa9_4af9_a6e9_5b4975d8f115
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_946a3370_266c_4515_b5a8_1117acc08671
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2c1e15b6_2e39_44a6_ab58_e36ee945ab00
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c0dcf420_5e96_4d26_9902_bf6d40bf0e46
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ea8492b7_4829_44a1_a599_e9295ae4bc5b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9cad1ef2_20ad_4ab0_91bc_e587a8de69f5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_05414a25_c769_4152_80e1_483c0d9d1d09
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4f67deed_34b7_4e73_af32_ad56c377bbeb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ac0fd8fb_3a1a_47f8_9e39_3007110bf44a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e942e531_71be_442f_836b_6058e4345bbb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#aff0e3ec_687c_434a_b9ad_d27be604c9c7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e474f107_3af7_413d_adc6_6283658d5b88
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Glucose[e] <=> Glucose[p] Confidence Level: 2
fast: false
reversible: true
name: Glucose transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_5196339c_1d8b_49ec_b5f0_de89357e0405
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2a2d4b11_f5d5_44bb_baf0_67a5aaca8aed
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4b0d4dca_3e47_4b6e_8c20_b92fde2597be
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#be42114b_ccb3_4bd8_99e9_9f71b4ba2a13
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Sulfopyruvate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_1d961bed_2373_4528_aa40_3f3de4783b88
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_05ad4228_f979_461d_9326_c5695e861f7d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9c2dcd91_8924_4507_8cc0_df112401eb31
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3f806220_c71d_40ba_8942_8b92a5d7b892
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_50b98b18_42fd_461c_a5a5_07a10ec2e5bc
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: H[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_715d7a03_6af9_4579_b935_6ecb87ce83cf
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ab33bea4_0101_4d84_b65b_235aba6d480d
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e84d9408_a08f_491d_8e8c_c45743463117
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4cbb588c_372a_4810_8057_e25db4c180d2
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c4fe9055_444a_4faa_9c64_30ef01229b5a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_13c08e42_6b2b_43e2_bb94_d7583077c479
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f2ed4f47_9697_4ef4_88bc_ee2e3f5cd31f
fast: false
name: lipoyl synthase
type: Reaction
notes: GPR_ASSOCIATION: RSP_2783 GENE_LIST: RSP_2783; SUBSYSTEM: Lipoic acid metabolism Equation: Octanoyl-[acp] + 2 Sulfur + 2 S-Adenosyl-L-methionine + 2 H+ <=> Lipoyl-[acp] + 2 L-Methionine + 2 5'-Deoxyadenosine Confidence Level: 2
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#fd92670b_1928_47d8_a24e_c12cbbbc945f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2e92c3be_839e_453a_986a_5489ad6f7f60
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#dde28a03_037c_455a_b08c_a27ee5f3da8b
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3b0105b2_d1d6_4ae5_b147_0c022881e125
name: ABC L-phenylalanine transporter
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + L-phenylalanine[p] <=> ADP + H+ + Orthophosphate + L-phenylalanine Confidence Level: 1
type: Reaction
fast: false
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#_18191415_0675_4f5d_9312_9b74f2dde6f4
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3e110f7b_436b_4439_9d3c_cc329ada0151
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d3f3c1f1_9dee_4b3a_900a_3a8d50fe90ee
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_21fef178_eca9_407c_b50f_4c490f455964
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ae6d1a7a_ae89_4d24_a7ce_840de90c0b6b
type: Reaction
reversible: false
name: ABC sulfate transporter
notes: GPR_ASSOCIATION: (RSP_3696 and RSP_3697 and RSP_3698 and RSP_3699) or (RSP_3858 and RSP_3861 and RSP_3860 and RSP_3859) GENE_LIST: RSP_3696; RSP_3697; RSP_3698; RSP_3699; RSP_3858; RSP_3861; RSP_3860; RSP_3859; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + sulfate[p] <=> ADP + H+ + Orthophosphate + sulfate Confidence Level: 2
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#a3694955_34ca_403b_b989_2c6457c4a16f
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-proline[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#cd3ec7a6_6723_4f5f_896d_16fc78680b42
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5d940de9_4b4f_4d5d_a70f_80ae6be3f37c
fast: false
name: D-Galactonolactone transport via proton symport
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: D-Galactonolactone[p] + H+[p] <=> D-Galactonolactone + H+ Confidence Level: 1
reversible: true
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_812851f7_fb71_41b1_9928_03e8ea3f63ba
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8500abac_f9f4_4df2_944b_8bfe122c1311
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_373eb9e4_4f72_4e0b_8563_7a5f7ef9c9b8
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1d5a451f_a02c_4c1a_9882_176a9ca2ca2e
reversible: false
type: Reaction
notes: GPR_ASSOCIATION: RSP_2868 GENE_LIST: RSP_2868; SUBSYSTEM: Purine metabolism Equation: IMP + NAD+ + H2O <=> Xanthosine 5'-phosphate + NADH + H+ Confidence Level: 2
fast: false
name: inosine-5-monophosphate dehydrogenase

http://identifiers.org/biomodels.db/MODEL1304240000#_17b34329_abef_45e9_9edd_9d544bf936e2
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_31a55813_b74f_4f0d_a927_5b55c9471de5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#db6e0c5e_52d3_4abe_92f5_0c21be0e321a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#eb55df6a_37ea_4330_8a13_40a46ddb2722
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4fc0f309_c345_4f8b_a0e7_3d5de9ad694a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e74a8e73_c43f_488b_9ca5_d75c3d6da06b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0c30a466_f74d_4c7e_8ae5_65ef46aa390b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_574fb59a_19c0_4e91_8702_fadd88f81e59
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#db9245cc_b732_4be4_997b_4fdac27a1dd8
fast: false
notes: GPR_ASSOCIATION: RSP_3536 GENE_LIST: RSP_3536; SUBSYSTEM: Fatty acid metabolism Equation: Tetradecanoyl-CoA + Acetyl-CoA <=> CoA + 3-Oxohexadecanoyl-CoA Confidence Level: 2
reversible: true
name: thiolase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#bca0f3f3_f12b_4c39_82d1_1675ea158242
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d13df201_b8f9_4cf1_b497_e631d0eb953b
type: Reaction
fast: false
name: 2-Oxoglutarate via proton symport
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: 2-Oxoglutarate[p] + H+[p] <=> 2-Oxoglutarate + H+ Confidence Level: 1
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#ae10021a_58f9_419e_bb39_a8555de4740c
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: (R)-Malate[e] <=> (R)-Malate[p] Confidence Level: 2
fast: false
reversible: true
name: (R)-Malate transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_528f2300_4b16_4427_ae8d_043c8a6c07df
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9c664279_bfe3_48da_8317_76cef8777e56
name: phosphoribosyl pyrophosphate synthetase
fast: false
type: Reaction
reversible: false
notes: GPR_ASSOCIATION: RSP_2301 GENE_LIST: RSP_2301; SUBSYSTEM: Purine metabolism Equation: ATP + D-Ribose 5-phosphate <=> AMP + 5-Phospho-alpha-D-ribose + H+ Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#af8eec87_2b83_4af8_83bb_f548a8c1fa6e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3a4865b4_6859_4469_8f87_90e120d0b86a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_89ae662a_8f89_4478_a754_c37295ff368c
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bd00a4ba_e289_457b_b46a_950073c0de39
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c8a02667_35d7_43e1_a234_9a3ca140f24b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_75562316_6cf4_4731_9122_e5a2553b40fb
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f69b1a93_edad_4efe_af96_6a1ad5c61666
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a3cf4d48_bc4f_4567_a5b1_232570ba8906
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#eca4ea8f_7c28_4088_9e38_969a5372b770
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c634cd1f_5ec5_4507_8b85_8216b75f280e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_99bd1b62_bd61_4d74_ab7a_c9848bd8e3a0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5e103325_8c46_492b_a769_d38bf45a46fa
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_94e86bea_2d6a_48a0_8804_df66416dcb7b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b9f42836_1cc6_4066_a554_de7abb71f04a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9be709aa_6ee6_4241_8dce_9e4f6ce33fa1
fast: false
name: UDP-glucose pyrophosphorylase
notes: GPR_ASSOCIATION: RSP_2565 or RSP_1159 GENE_LIST: RSP_2565; RSP_1159; SUBSYSTEM: Amino sugar and nucleotide sugar metabolism Equation: UTP + D-Glucose 1-phosphate <=> Diphosphate + UDP-glucose Confidence Level: 2
reversible: true
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_62e12aa9_0171_4733_b001_cb69ca12b4e3
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7cf64f44_c2d0_4ee8_b565_8854e5744cbc
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Ribose[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#fa586f3c_2c5e_4c0e_a4aa_958bd0487dd6
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9f33119b_7655_4335_8393_3cb18bc92786
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1e2c9111_a880_47e9_a9c4_f8fb828cbd98
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8636bd40_1496_4227_b27e_f2dd1074609b
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Alanyl-D-alanine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_89300d2b_c554_4ef2_9e69_3ec9bde56778
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b70825d0_72c7_4049_bd0f_7dea30d423ad
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a866f0dd_f85b_4302_abb4_a7a63e71caa6
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#cfbf7261_4249_4a6a_9485_4fa7f73cf16d
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Mannose
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#e3165cca_03c2_42b7_b2fd_9b0c82210f40
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5dbd3b94_2af6_4bd7_a315_20a3c65d84c0
reversible: true
notes: GPR_ASSOCIATION: RSP_0279 GENE_LIST: RSP_0279; SUBSYSTEM: Porphyrin and chlorophyll metabolism Equation: Bacteriochlorophyllide a + Phytyl diphosphate <=> Bacteriochlorophyll a + Diphosphate Confidence Level: 4
type: Reaction
name: bacteriochlorophyll/chlorophyll a synthase
fast: false

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notes: GPR_ASSOCIATION: RSP_1370 GENE_LIST: RSP_1370; SUBSYSTEM: Starch and sucrose metabolism Equation: Maltose + H2O <=> 2 D-Glucose Confidence Level: 2
fast: false
reversible: true
name: alpha amylase domain-containing protein
type: Reaction

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stoichiometry: 1.0
type: SpeciesReference

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notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Glycolaldehyde[e] <=> Confidence Level:
fast: false
reversible: false
name: Glycolaldehyde exchange
type: Reaction

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stoichiometry: 0.00299
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type: LocalParameter

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type: SpeciesReference

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type: LocalParameter

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type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
type: Species

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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type: SpeciesReference

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type: SpeciesReference

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type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Hypoxanthine[e] <=> Hypoxanthine[p] Confidence Level: 2
fast: false
reversible: true
name: Hypoxanthine transport via diffusion
type: Reaction

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value: 1000.0
type: LocalParameter

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type: SpeciesReference

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value: -1000.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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type: SpeciesReference

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notes: GPR_ASSOCIATION: RSP_1597 GENE_LIST: RSP_1597; SUBSYSTEM: Purine metabolism Equation: Adenosine + H2O + H+<=> Inosine + NH3 Confidence Level: 2
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name: adenosine deaminase
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fast: false

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type: SpeciesReference

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boundary condition: false
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initial amount: NaN
name: gamma-Carotene
type: Species

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has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Diphosphate
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type: SpeciesReference

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type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: N-Carbamoyl-L-aspartate
type: Species

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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Cu2+[e]
type: Species

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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initial concentration: NaN
initial amount: NaN
name: D-lactamide[e]
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type: SpeciesReference

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type: Reaction
notes: GPR_ASSOCIATION: RSP_0910 and RSP_0911 and RSP_0912 GENE_LIST: RSP_0910; RSP_0911; RSP_0912; SUBSYSTEM: Transport, inner membrane Equation: Fumarate[p] + 2 Sodium[p] <=> Fumarate + 2 Sodium Confidence Level: 3

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value: 0.0
type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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value: 1000.0
type: LocalParameter

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type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_1396 and RSP_1395 and RSP_1394 GENE_LIST: RSP_1396; RSP_1395; RSP_1394; SUBSYSTEM: Oxidative phosphorylation Equation: Ubiquinol + 2 Ferricytochrome c + 2 H+ <=> Ubiquinone + 2 Ferrocytochrome c + 4 H+[p] Confidence Level: 4
reversible: true
fast: false
name: ubiquinol-cytochrome c reductase, iron-sulfur protein
type: Reaction

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value: 1000.0
type: LocalParameter

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stoichiometry: 2.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Threonine O-3-phosphate[p]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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type: LocalParameter

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value: -1000.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3'-UMP[e]
type: Species

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type: LocalParameter

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boundary condition: false
has only substance units: false
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initial amount: NaN
name: Selenocysteine
type: Species

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value: -1000.0
type: LocalParameter

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type: LocalParameter

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type: SpeciesReference

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type: LocalParameter

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type: LocalParameter

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type: SpeciesReference

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type: LocalParameter

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value: -1000.0
type: LocalParameter

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has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (S)-Lactate[p]
type: Species

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type: LocalParameter

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type: LocalParameter

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stoichiometry: 2.0
type: SpeciesReference

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type: LocalParameter

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type: LocalParameter

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type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
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name: 2',3'-CyclicGMP[e]
type: Species

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reversible: false
notes: GPR_ASSOCIATION: RSP_1869 or RSP_1492 GENE_LIST: RSP_1869; RSP_1492; SUBSYSTEM: Ubiquinone and other terpenoid-quinone biosynthesis Equation: 2-Octaprenyl-6-methoxyphenol + Oxygen + NADPH <=> 2-Octaprenyl-6-methoxy-1,4-benzoquinone + NADP+ + H2O + H+ Confidence Level: 2
type: Reaction
fast: false

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_67f3042f_29ad_4daa_8dc7_92f268356b6a
value: 1000.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5224605c_c41d_4e81_8117_e5ea9dd0eeab
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1339c66c_bac4_4626_99f1_376c3db520f5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: ITP
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_98a831c4_15ae_49a6_a1c7_ca4d190715c3
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Citrulline[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_6d32b801_19f0_45d6_abfd_839afa61229b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e6d71798_5c98_40d1_831f_6e6623d91259
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7ab88d6e_1aea_4591_8cf9_065ff68b8c59
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c4c9f428_d5dc_4716_bcb7_92a837f618f7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f13ad566_2708_4e01_9f67_9fd60f43a4aa
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4e20fbb9_4498_4111_8cf5_ee287b870b0d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_6b163bae_c88b_4655_bcc5_4671d2479625
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_178757e0_66be_4c1c_8f03_238f0bd0740e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bd259547_a6c5_48c0_a911_6b11456f182f
fast: false
type: Reaction
name: aminotransferase
reversible: true
notes: GPR_ASSOCIATION: RSP_2176 GENE_LIST: RSP_2176; SUBSYSTEM: Alanine, aspartate and glutamate metabolism Equation: 4-Aminobutanoate + 2-Oxoglutarate <=> Succinate semialdehyde + L-Glutamate Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#f93d95e2_bc72_4520_9f5c_b885ca9543f4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_79bee6d6_37de_44f2_98a2_bbf26bb145ee
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_044a80c3_f250_4b11_981e_45c3a507554b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_06ddbf92_4d2c_4d49_a8dc_647758fc1605
reversible: false
notes: GPR_ASSOCIATION: (RSP_3968 and RSP_3967 and RSP_3966 and RSP_3964) or (RSP_3968 and RSP_3967 and RSP_3966 and RSP_3965) or (RSP_3297 and RSP_3294 and RSP_3293 and RSP_3295) or (RSP_3297 and RSP_3294 and RSP_3293 and RSP_3296) or (RSP_2923 and RSP_2926 and RSP_2927 and RSP_2925) or (RSP_2923 and RSP_2926 and RSP_2927 and RSP_2924) or (RSP_2275 and RSP_2277 and RSP_2276 and RSP_2274) or (RSP_2275 and RSP_2277 and RSP_2276 and RSP_2278) or (RSP_1290 and RSP_1291 and RSP_1289 and RSP_1287) or (RSP_1290 and RSP_1291 and RSP_1289 and RSP_1288) or (RSP_0301 and RSP_0300 and RSP_0299 and RSP_0297) or (RSP_0301 and RSP_0300 and RSP_0299 and RSP_0298) GENE_LIST: RSP_3968; RSP_3967; RSP_3966; RSP_3964; RSP_3968; RSP_3967; RSP_3966; RSP_3965; RSP_3297; RSP_3294; RSP_3293; RSP_3295; RSP_3297; RSP_3294; RSP_3293; RSP_3296; RSP_2923; RSP_2926; RSP_2927; RSP_2925; RSP_2923; RSP_2926; RSP_2927; RSP_2924; RSP_2275; RSP_2277; RSP_2276; RSP_2274; RSP_2275; RSP_2277; RSP_2276; RSP_2278; RSP_1290; RSP_1291; RSP_1289; RSP_1287; RSP_1290; RSP_1291; RSP_1289; RSP_1288; RSP_0301; RSP_0300; RSP_0299; RSP_0297; RSP_0301; RSP_0300; RSP_0299; RSP_0298; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + L-leucine[p] <=> ADP + H+ + Orthophosphate + L-leucine Confidence Level: 2
fast: false
name: ABC L-leucine transporter
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#f0885ce3_e527_4597_9e17_05bafea50bfd
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_22aded5a_e55b_4d39_8f6f_b0322ce81a09
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_55598a39_db2a_4e5f_9a1e_629de529bf6d
reversible: true
name: CDP-alcohol phosphatidyltransferase
fast: false
notes: GPR_ASSOCIATION: RSP_0720 GENE_LIST: RSP_0720; SUBSYSTEM: Glycerophospholipid metabolism Equation: CDP-diacylglycerol + L-Serine <=> CMP + Phosphatidylserine + H+ Confidence Level: 4
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_4b57be82_1dab_40dd_8b38_2f6f002510ec
reversible: false
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + Glucose[p] <=> ADP + H+ + Orthophosphate + Glucose Confidence Level: 1
type: Reaction
fast: false
name: ABC Glucose transporter

http://identifiers.org/biomodels.db/MODEL1304240000#d5992e72_680f_4b58_becb_6a7ac0c2d50d
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2fe0d148_1046_4554_a173_65cfe2554582
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_929d947b_f0d6_498a_b4fa_8428e6f6f129
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: D-Arabitol[e] <=> Confidence Level:
fast: false
reversible: false
name: D-Arabitol exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_20bb30ef_cf5a_46ed_b1af_9cb96d26d4a4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_833f5c6a_fe97_42ac_9f86_30a85601b0af
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_213785aa_3b87_4187_a587_cbe3a21f2219
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3eed9a2c_8e52_4716_8f9a_801755b6cb10
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: dCTP
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_18d39393_7c74_4bf4_bb3e_f36847b8265b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1e55c0b3_3b56_468e_9994_ec871739a964
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_58e5ac56_4416_4460_ba30_31ee7405ba11
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2892e889_40b1_4097_b68e_a823c1f53423
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_74d102c2_6a1d_4548_9354_c359a10e1480
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f9341f80_9713_4c3f_82b5_9166ad1300ae
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3,4-Dihydroxyphenylacetate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_5851d0aa_418d_4cba_a54b_a705dc29267b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8a8c6958_2337_456b_ab4a_285c2880a52b
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e2c7d547_798e_4062_b9ea_6bc9c486fb32
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7ca7ee1d_76b3_47b7_967d_bc268368942c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_089bfab7_c71e_464e_9b57_bf00ed4e6339
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: ReducedFMN
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_722a8379_dd7a_44d2_8343_e1250d2442ad
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d7a9417d_30e7_4961_851f_3ba871dda2c2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c89513f7_f611_4f9c_af1a_0b745486adcb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_16d6b471_03d9_4954_a19d_0162d8e0935c
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f8c06ac3_aff6_4410_acd4_931875e4e540
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_6faaca8e_2f6a_4d42_879d_2c98dc89ec12
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: N-Acetyl-D-glucosamine[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#f80fa657_2536_4053_8308_2ece570655ec
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_740319b3_1e39_47d4_92cf_143be62cf5b0
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3fa8b067_0494_4d24_bd56_7537498b7ddd
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_83cdedfd_6c23_4310_ba2f_d032c23a75d7
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_938874c9_ec20_435e_a28d_352610d3b40e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f8cce34c_f020_4b3f_9780_fd017e49f6b9
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f99c4c77_125c_466e_a1cf_2f0f762d89d7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_60f9ed04_47bf_4697_91d5_96a37a3a4d36
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Hippurate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_5053dbd5_11db_449f_a384_fe24e938fb55
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_46af02b3_4ee6_47e4_a0cb_7ed6c88d5900
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ee8c145e_f5a2_4645_9167_16722a86d583
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_014366c0_9bdb_444b_a43a_5674681564e4
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_6ed96115_9aff_4962_b980_892714452ec6
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_52fef147_f9ed_455e_867d_71a5502bfaa6
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f5634a3c_d7dc_45ea_8f43_3a6668112aaa
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#aaf3fe23_2eaf_44c6_a276_d0df07fe81da
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c7e3d288_73b9_4fc0_afce_144ae35cd8e7
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Urate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_7dc6277c_1edb_4206_8969_1f933af75477
name: putative 5-formyltetrahydrofolate cyclo-ligase
type: Reaction
fast: false
reversible: false
notes: GPR_ASSOCIATION: RSP_1898 GENE_LIST: RSP_1898; SUBSYSTEM: One carbon pool by folate Equation: ATP + 5-Formyltetrahydrofolate <=> ADP + Orthophosphate + Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#d8116ea9_fb92_416b_848f_063a80e9a91d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_84979528_e4ba_4c3f_9ad9_7ef38ceee540
fast: false
reversible: true
name: uroporphyrinogen decarboxylase
notes: GPR_ASSOCIATION: RSP_0680 GENE_LIST: RSP_0680; SUBSYSTEM: Porphyrin and chlorophyll metabolism Equation: Uroporphyrinogen I + 4H+ <=> Coproporphyrinogen I + 4 CO2 Confidence Level: 4
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_9b2c2cc7_f699_4d5a_b79e_132e91aebd89
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c7765971_2ecd_4e88_a8a0_c705cfdc2470
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4abf012c_7595_473f_8db1_fd37c22eece5
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1e0c0d75_5737_4874_8d8a_af1b012d47cd
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e0f4dcf6_c510_4a40_9e02_23d0fc1d9736
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Deoxyinosine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#c0d83518_ad38_4ec5_9b0c_2666d746130d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f53efc8d_fd39_4f09_b61f_40fc37752d3e
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c35ce052_766f_41d2_86cf_5beae3e354da
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e9795365_5ec1_4433_86b1_08193b5a8508
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e893791e_7396_4e6b_a6af_512d7e2a9eb4
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_819193fb_170d_4599_9750_23e23175229c
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6cd8aedc_7eb6_4535_b696_496f1adc4bdb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e336ef0b_93da_4f81_b2a7_6e603c37f277
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ba9b8efb_df2a_44dd_96b0_b1b2c8a2888b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2e4c9d8c_9e97_4b53_a268_c32ebd5331a1
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_568b8f81_cd74_425f_aaea_70a700895c2b
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Protochlorophyllide
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_366456fb_6ccf_4d91_a459_eedcff0cad3e
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_110833cb_cf5a_4539_a4af_7bb1f37c7969
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1547f43a_2233_4267_87f6_a36e914de4fa
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_238a9f90_27e8_4cb5_aa6a_3ca10203b17f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#aed8289b_bec9_4ab2_bb11_f93207cd64c9
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_539b448d_ced3_459c_9514_d4cfbed8475c
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fd6f9e20_96d7_4624_bad7_2d978e1d55be
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f119a9f5_eaf0_4089_b7ef_71d9385e5101
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#eda8ef51_8aef_4d16_ad3b_9f2bffc72b10
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_663aed08_c17a_4550_af15_666efd72c719
stoichiometry: 9.95E-4
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9b27073f_9eae_4fc0_ba62_2afd66375434
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4919f1f5_6853_4bd6_b80e_e15b757f6f7e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fe5e3100_d2ad_43c1_8f81_0ff5db1cfb04
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_638acfb0_df08_4003_9ba5_164a9466fc43
notes: GPR_ASSOCIATION: RSP_1947 GENE_LIST: RSP_1947; SUBSYSTEM: Fructose and mannose metabolism Equation: D-Glyceraldehyde 3-phosphate <=> Glycerone phosphate Confidence Level: 2
fast: false
reversible: true
name: triosephosphate isomerase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_80ee998c_cbd7_4cb0_ab0e_b338646f264b
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Aminoimidazoleribotide
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_515ce7c7_1678_4cde_940f_4aa65a9ed493
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Fe+2[e] <=> Fe+2[p] Confidence Level: 2
fast: false
reversible: true
name: Fe+2 transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#fbed133c_09e7_4cc0_a4f2_41d9afbe63a0
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5acaaadb_048b_411b_8a2a_53ebbda49319
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_50d05078_185f_4b43_a147_30fb083ee892
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_66ad4e8a_d1bd_4e32_ae3e_116a68cbc21e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_720f4100_151a_4826_8871_e3fadf9117d9
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8ea64bab_ff08_48c3_969c_1a24be0a0641
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4c7d87d2_48f2_47cf_bc65_43dc19ee6544
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f7306103_d5c6_42d6_beff_dde93c1a678c
type: Reaction
name: phosphomethylpyrimidine kinase
notes: GPR_ASSOCIATION: RSP_0647 GENE_LIST: RSP_0647; SUBSYSTEM: Thiamine metabolism Equation: ATP + 4-Amino-2-methyl-5-phosphomethylpyrimidine <=> ADP + 2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + H+ Confidence Level: 2
fast: false
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#_7139976a_141b_4645_ad85_17ca91d5f0e8
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7afc9716_40fd_4a4e_bf54_7730735fc780
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#dfdd441b_6086_4d1c_9cbe_f3936a7611cb
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ff8979f8_2357_4585_b1d0_1bd10eb851d3
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f5f00fa1_4595_47ba_9988_4b8dd393cb5e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9fba0bd1_3960_4007_898c_99f7539c74de
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_09920666_13ef_482d_8ab5_04008ef56b67
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_74a5a128_6b63_4041_b458_60bc20d5e285
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8c5ce809_6412_4890_907c_a25de32fcf75
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d006ca61_2c8d_4b83_9ebd_f724b4cca391
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d1d9c8fb_5634_4962_97d5_b4f49bfe9320
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: trans-Oct-2-enoyl-CoA
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_76263a40_653b_4aca_9045_2392a2f3ee33
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_68a85882_8bc1_44fc_bf52_93397f910b2b
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: O-Phospho-L-serine[p] + H+[p] <=> O-Phospho-L-serine + H+ Confidence Level: 1
type: Reaction
name: O-Phospho-L-serine transport via proton symport
fast: false
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#e4033929_0506_40fa_a4fa_1358a28b0125
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7cd23fe4_ad14_4871_a1ab_f1c628475a4a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_70943466_c0e4_4ecd_81d1_3aca52d0c81c
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_46514366_ead3_4c26_875f_96b6801996e9
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ce620edb_b1c0_4b1d_9e37_1052dc3729d8
fast: false
type: Reaction
reversible: true
name: thiolase
notes: GPR_ASSOCIATION: RSP_3536 GENE_LIST: RSP_3536; SUBSYSTEM: Fatty acid metabolism Equation: Hexanoyl-CoA + Acetyl-CoA <=> CoA + 3-Oxooctanoyl-CoA Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#b80891bf_28bd_4b9d_8b18_c717992821d9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_39e4b4a3_f8d4_4808_a6cd_02e24680b79b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bce510f1_62ce_4450_9482_8dc7210a1d9a
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f0125cd4_9a09_4923_9bf1_c0cd7975f61f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#cf850228_d74d_4f25_8f5a_3653fb46b015
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_04001aa4_bb18_4f8d_b41c_bbebd2ded979
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: UDP-3-O-(3-hydroxytetradecanoyl)-D-glucosamine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_61e25d1f_8fbe_42c4_9c6e_fef34d33c686
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d15692e0_914b_44f0_aad0_237e0e5ebb42
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Purine metabolism Equation: Urate + Oxygen + H2O <=> 5-Hydroxyisourate + H2O2 Confidence Level: 1
reversible: true
fast: false
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_59079acd_ccc8_4306_8dd8_04fdcf90b75c
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_309d7cee_adfb_4f78_9bf3_7b0b4045371a
name: UDP-N-acetylglucosamine acyltransferase
type: Reaction
fast: false
notes: GPR_ASSOCIATION: RSP_2714 GENE_LIST: RSP_2714; SUBSYSTEM: Lipopolysaccharide biosynthesis Equation: (3R)-3-Hydroxytetradecanoyl-[acyl-carrier protein] + UDP-N-acetyl-D-glucosamine <=> Acyl-carrier protein + UDP-3-O-(3-hydroxytetradecanoyl)-N-acetylglucosamine + H+ Confidence Level: 2
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#c2b868c2_f162_4fd3_af5e_10a4fe065c3b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b5102561_e526_405f_95ae_9a7a23ae81de
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5132d124_ce0c_4f21_a057_3354aa60daff
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2d5c7f93_c219_468f_baff_966b1443225d
notes: GPR_ASSOCIATION: RSP_0191 GENE_LIST: RSP_0191; SUBSYSTEM: Pyruvate metabolism Equation: ATP + Holo-[carboxylase] + HCO3- <=> ADP + Orthophosphate + Carboxybiotin-carboxyl-carrier protein + H+ Confidence Level: 2
reversible: true
type: Reaction
name: acetyl-CoA carboxylase biotin
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#a220e7b7_0aec_4152_8844_f4821fb64a47
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b9daa55e_18ac_479f_9f96_d449d0eea2d8
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: D-Methionine[e] <=> D-Methionine[p] Confidence Level: 2
fast: false
reversible: true
name: D-Methionine transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_9aca6faa_4344_418c_aebf_50658f11378e
type: Reaction
notes: GPR_ASSOCIATION: RSP_0183 or RSP_3462 GENE_LIST: RSP_0183; RSP_3462; SUBSYSTEM: Pyrimidine metabolism Equation: 5,6-Dihydrothymine + H2O <=> 3-Ureidoisobutyrate + H+ Confidence Level: 2
name: phenylhydantoinase
reversible: true
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#db5fe664_3852_45f0_a8fd_41a5effe3d17
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f6d18b47_fbc2_468d_8bcb_59461d2968fa
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_956c4628_32c9_48fb_8852_5eb4c2db4b50
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: S-Aminomethyldihydrolipoylprotein
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#db93ed75_307b_4dec_8921_3489a2739b52
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_366b224f_8cb1_49d8_b630_490b809a88f4
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1c538f18_7105_4328_8f72_7ecbeb9255ef
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-Dglutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_40a9c282_843f_468d_9aaf_3b70504fd129
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-erythro-3-Methylmalate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_644607b1_16c7_4854_8489_dd538064d4d1
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: O-Phospho-4-hydroxy-L-threonine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_441ff2e6_c67f_4dcc_bd6d_20ada44ecf43
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bc695400_c815_4df0_ba62_21fee074d855
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: sn-glycero-3-Phosphoethanolamine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_73f4f4a4_1b66_4f3f_9863_ab24e02a7ea3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ce0ebd4a_cf34_452e_9e33_b4e9dc4789ee
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_866163db_9789_482a_b130_d3c255307385
notes: GPR_ASSOCIATION: RSP_0960 GENE_LIST: RSP_0960; SUBSYSTEM: Propanoate metabolism Equation: Crotonoyl-CoA + NADPH + CO2 <=> (2S)-Ethylmalonyl-CoA + NADP+ Confidence Level: 4
type: Reaction
name: crotonyl-CoA carboxylase/reductase
fast: false
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#_497ce939_ef0a_43ef_926e_7245baae1a04
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: alpha-Ribazole
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_012a6c56_1978_4e9f_9eff_8d6189adc519
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Precorrin6Y
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#dfff7486_69b6_4acb_8f3b_a2ce4ca96e07
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Mercaptopyruvate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_13cf88bc_06c9_402b_8b0e_86012da79246
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Sulfate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#d41c9750_1c56_46eb_8646_5b53f057bdb5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Phosphoglycolate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#dd9f4c8c_472c_467f_b43e_db384ec16c21
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: 6-Phospho-D-gluconate[e] <=> Confidence Level:
fast: false
reversible: false
name: 6-Phospho-D-gluconate exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_74ab86ba_5eec_4053_b63b_fedfc02b9538
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a4e932d9_e034_41d7_96ff_f460353871d2
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_13238cc9_1456_42b0_88c5_e2c648c223a7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1f983a37_d161_474d_a086_0a79b3485a7b
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: D-Serine[e] <=> D-Serine[p] Confidence Level: 1
fast: false
reversible: true
name: D-Serine transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_40f264cf_92a1_455d_a6c8_5042d0d50625
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f8b1b0a2_42c3_44d3_ba5a_ca651c851622
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fc56ad17_ac91_4f16_8887_21cfbbc6e452
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_33fb01c9_8218_48e1_ae02_e8115f912f81
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2fe825b4_d560_44bb_a81e_33de7a1daf2e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ee4a6b18_bf8b_415d_ae48_da39de15dab7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b2df9bdb_8a6f_4e9f_9b51_8d15744f0bbc
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Cholinephosphate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b2f04263_8a09_4577_ba30_9496d5528954
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (3R)-3-Hydroxyoctanoyl-[acyl-carrierprotein]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b8623ac0_2303_4492_85b5_7b18e3f0d849
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3e6d22f4_f7e7_42f6_886a_017d3d902ab9
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_65da4f9e_c130_4c6f_9731_09c4a019c3af
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4b591b47_40b3_4f5f_b304_0aea29057ecb
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_46ed2313_c7cb_4c21_b412_5804a44c433b
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7fe3c161_f53f_4dfc_925a_cf0eee00c06d
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Trimetaphosphate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_1de44e03_c849_4b24_b6f0_b6480c4a2c55
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a98b46a8_87d2_450c_bcc0_4d5676b36a5c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8e799461_98a4_4310_ad30_05e3750fec8c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Catechol
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_8977ce51_3a23_478e_ad63_517356a63e49
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a99b3db8_3383_4a09_8dd7_9a6562366320
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_503e0c03_2f91_49e5_906b_9c6e64402ccf
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d311263a_2333_4acd_8d57_48c90fe5abf7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_469d4de2_4f5d_4557_9aab_b7c94da177ec
notes: GPR_ASSOCIATION: RSP_2246 GENE_LIST: RSP_2246; SUBSYSTEM: Histidine metabolism Equation: D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate <=> 3-(imidazol-4-yl)-2-oxopropyl phosphate + H2O Confidence Level: 2
fast: false
reversible: false
name: imidazoleglycerol-phosphate dehydratase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#d91f9dcb_f6e1_4fae_98e4_a345ac51aa3b
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#db678f4c_58af_42ab_91f7_d23f3170358d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3c66e1d0_baa1_4643_a4ed_ce6ff1e57fe0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9bbd10fd_d9ec_42fd_80a1_ae2f6ee19a68
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_14f0488d_3c52_4859_aeed_4d1e1385ef2b
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ea1f2b65_b13b_4979_86f6_4ab22dfa8dbf
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Dethiobiotin
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_9aa4b09b_9190_4df8_b739_0c6a8be36261
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_752f308c_23c1_4efa_8f71_e69b418fa9e4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#eb8057c6_a3f9_45aa_8555_cd40947b0150
type: Reaction
fast: false
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: Hippurate[p] + H+[p] <=> Hippurate + H+ Confidence Level: 1
name: Hippurate via proton symport
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#eec303a1_58e5_432b_b3bc_22ea79393246
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fc09fd6e_cada_4ed2_ab53_b63a227da841
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#cd2514eb_c0ab_41a5_86c8_9e48bd16c9b9
stoichiometry: 8.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4c49676e_c211_4ac0_956f_69a343a23737
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Aminoacetaldehyde[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_800dee29_47c3_46a5_a712_37da452fdebd
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ef8eccc8_f0ad_4e3b_9744_5a6ea651b92c
name: asparaginase
reversible: false
type: Reaction
fast: false
notes: GPR_ASSOCIATION: RSP_3949 GENE_LIST: RSP_3949; SUBSYSTEM: Alanine, aspartate and glutamate metabolism Equation: L-Asparagine + H2O <=> L-Aspartate + NH3 Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#_812778e1_9eb4_43c0_977f_c83217587cc7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#de777b2c_2fef_4de1_bcee_dcc1991a9b06
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1b4cd64b_53c1_4e7c_bba4_b40a4b9909d3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f20c7e93_a7ab_4925_a6aa_50fa58e46a3a
stoichiometry: 5.9E-5
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8b6c4144_e16f_4075_89ba_1e88c868bc65
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bae4ed23_977f_4821_b13a_d23357104570
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-proline[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_88af07e6_d4bd_4d0a_aed4_4719b0514f01
stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: spermidine[p]
type: Species

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_344fcd3b_8e49_45f7_868e_aba3ecdf3a2b
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_08d83aed_73ac_4113_8453_1567687ec775
value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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notes: GPR_ASSOCIATION: RSP_2219 GENE_LIST: RSP_2219; SUBSYSTEM: Lipopolysaccharide biosynthesis Equation: Dodecanoyl-[acyl-carrier protein] + Di[3-deoxy-D-manno-octulosonyl]-lipid IV(A) <=> Lauroyl-KDO2-lipid IV(A) + acyl-carrier protein + H+ Confidence Level: 2
fast: false
name: putative lipid A biosynthesis lauroyl acyltransferase
type: Reaction
reversible: true

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Magnesium[p]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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reversible: true
type: Reaction
name: L-2-Aminoadipate-6-semialdehyde:NAD+ 6-oxidoreductase
notes: GPR_ASSOCIATION: RSP_1292 GENE_LIST: RSP_1292; SUBSYSTEM: Lysine degradation Equation: L-2-Aminoadipate 6-semialdehyde + NAD+ + H2O <=> L-2-Aminoadipate + NADH + 2 H+ Confidence Level: 1
fast: false

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value: 0.0
type: LocalParameter

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fast: false
notes: GPR_ASSOCIATION: RSP_1827 GENE_LIST: RSP_1827; SUBSYSTEM: Porphyrin and chlorophyll metabolism Equation: Heme + trans,trans-Farnesyl diphosphate + H2O <=> Heme O + Diphosphate Confidence Level: 3
name: protoheme IX farnesyltransferase
type: Reaction
reversible: true

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Amino-7,8-dihydro-4-hydroxy-6-(diphosphooxymethyl)pteridine
type: Species

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Hydroxypropanoate[e]
type: Species

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_73d605eb_a6f8_4de0_832c_d90cdbe9bc2e
value: 0.0
type: LocalParameter

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fast: false
notes: GPR_ASSOCIATION: RSP_0451 and (RSP_4325 or RSP_4330 or RSP_4339 or RSP_4349 or RSP_4354) GENE_LIST: RSP_0451; RSP_4325; RSP_4330; RSP_4339; RSP_4349; RSP_4354; SUBSYSTEM: Aminoacyl-tRNA biosynthesis Equation: ATP + L-Alanine + tRNA(Ala) <=> AMP + Diphosphate + L-Alanyl-tRNA Confidence Level: 2
reversible: false
type: Reaction
name: alanyl-tRNA synthetase

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Mn2
type: Species

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Mannitol[e]
type: Species

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type: Reaction
name: catalase
notes: GPR_ASSOCIATION: RSP_2380 or RSP_2779 GENE_LIST: RSP_2380; RSP_2779; SUBSYSTEM: Methane metabolism Equation: Methanol + H2O2 <=> Formaldehyde + 2 H2O Confidence Level: 4
reversible: false
fast: false

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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type: Reaction
name: pantothenate kinase
fast: false
reversible: false
notes: GPR_ASSOCIATION: RSP_2533 GENE_LIST: RSP_2533; SUBSYSTEM: Pantothenate and CoA biosynthesis Equation: ATP + N-((R)-Pantothenoyl)-L-cysteine <=> ADP + (R)-4'-Phosphopantothenoyl-L-cysteine + 2 H+ Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#c7a974ad_adf5_4613_8df1_2abfc4877b35
stoichiometry: 1.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

MODEL1304240000
curated: false
area units: area
notes: Rhodobacter sphaeroides model (Version 2 - iRsp1140)
name: Imam2013 - Metabolic network in Rhodobacter sphaeroides (iRsp1140)
length unit: length
type: SBMLModel

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value: 0.0
type: LocalParameter

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type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
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stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: cis-2-Methyl-5-isopropylhexa-2,5-dienoyl-CoA
type: Species

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Hydroxyoctadecanoyl-[acp]
type: Species

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: UDP-6-sulfoquinovose
type: Species

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value: -1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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type: SpeciesReference

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value: 0.0
type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Fatty acid
type: Species

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value: 0.0
type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Methylpropanoyl-CoA
type: Species

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Ala-Gln[e] <=> Ala-Gln[p] Confidence Level: 1
fast: false
reversible: true
name: Ala-Gln transport via diffusion
type: Reaction

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Methanethiol
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_896e64d0_3c42_4585_94dc_a51211a7dc89
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Hypotaurine[e] <=> Hypotaurine[p] Confidence Level: 2
fast: false
reversible: true
name: Hypotaurine transport via diffusion
type: Reaction

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stoichiometry: 0.158241164502485
type: SpeciesReference

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type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Acetoin[e]
type: Species

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value: 0.0
type: LocalParameter

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type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Diacylglycerylhomoserine
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: 2-Methylmaleate[e] <=> 2-Methylmaleate[p] Confidence Level: 1
fast: false
reversible: true
name: 2-Methylmaleate transport via diffusion
type: Reaction

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2',3'-CyclicCMP[e]
type: Species

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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stoichiometry: 2.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e3bf20e5_8a53_4958_9273_7589f8f148ed
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8b1a3b48_3bc9_45ab_afac_42e64b102be4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: O-Acetyl-L-serine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_3b5262fe_cb3b_4e3b_bd6e_251762cd2662
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_401e8c05_81e5_4a84_a90b_a246aadc08cf
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5188ee5b_b5b4_4580_95ab_d39ae1c0b668
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b11a57da_636d_4af9_9736_6ac79616d455
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6631e2cc_7aee_45d3_9372_7a360e2dde37
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Butanoyl-CoA
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_6bf996a4_744d_421a_a380_c06f72539546
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e4d8e7fc_09e9_4e42_b6b6_f89c6d0384c1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5992968b_cf52_4725_b033_bd52fd1ad29e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_70581836_5f89_46e7_a96c_261d08dcb9e0
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7d067904_7de8_4d4a_a8aa_0e0921bf5a6f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c9a8dd96_8189_41f0_9d57_9c9484dbafb9
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_02ae472f_368a_414b_9a66_bb2ff46cd0cb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ad7e3cda_de9f_42cb_9c6e_6972c8b82422
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7cd3ea1a_db86_463f_8efe_2ab28dd97ac0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b95b0b54_423a_4341_a1ef_5d4391e144cd
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bd374b91_7db0_4864_af4f_3adbad25a366
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ffa4bd6c_71fb_4682_88c3_fb24176fc090
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ab5c3f09_73e1_4ad5_bd68_bc9134b1dcfd
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_15e4f8f4_22a4_4f4d_a999_45e45496800e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_185aa563_cd98_4733_9311_4e1fad9665d7
type: Reaction
fast: false
reversible: true
notes: GPR_ASSOCIATION: RSP_2008 or RSP_1494 GENE_LIST: RSP_2008; RSP_1494; SUBSYSTEM: Arginine and proline metabolism Equation: N-Succinyl-LL-2,6-diaminoheptanedioate + 2-Oxoglutarate <=> N-Succinyl-2-L-amino-6-oxoheptanedioate + L-Glutamate Confidence Level: 2
name: acetylornithine transaminase

http://identifiers.org/biomodels.db/MODEL1304240000#_4e1df42a_9d6e_4ba7_8ea9_8383bfd02674
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_18bdf0e6_5cea_4ad1_8817_755403c32ced
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_199a4ce4_8ac0_42ef_9109_0bfb4e750e6a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2c99a97c_242a_4d36_80b5_7a422b68770d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_57414fe6_bbb6_49ae_99ea_58bc80763c5d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7dcde92e_8f41_4e68_b6c3_f49051ed4dbb
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Gly-Met[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#a5db177a_ab76_44f5_97b5_116d1f732679
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_722fdc79_dcc9_4f06_81f5_b844720297aa
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c7eb40d6_4c17_4956_9b20_f3cb332f86f0
name: adenosylcobinamide kinase
fast: false
notes: GPR_ASSOCIATION: RSP_0602 GENE_LIST: RSP_0602; SUBSYSTEM: Porphyrin and chlorophyll metabolism Equation: Adenosyl cobinamide + ATP <=> Adenosyl cobinamide phosphate + ADP + H+ Confidence Level: 3
type: Reaction
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#_355e3f1f_cf0b_4e6c_9dc3_2c22c6b18123
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5141d94c_218c_4447_b213_6898e44d3d68
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2a2b84ec_a409_4fe7_b871_e658a759ae35
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 4-Methyl-2-oxopentanoate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b45d15dd_1d59_4b2f_915d_98fd4fbf82a6
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9b4f65e1_908d_4ff3_8571_f1449c294c13
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1b9fa4e9_2d7f_444f_9d2d_6c9b192741cc
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9def897a_e1ac_4ec0_83ac_8028503d340c
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1ec57697_32e2_47b7_b2b0_1d3379e88a2f
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Fumarate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b378fea5_6c42_43ff_bf7a_222bac0eaeed
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fb37a6a2_721d_4793_96ec_200fc9a8f6e7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Glutathionedisulfide
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#e0c8c251_747f_4078_b17c_912d226ecb5d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4a790685_685e_4487_9861_c7d75d445e8a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#dccdacad_b9d1_4ef7_bee1_ba75018cc70e
fast: false
reversible: true
type: Reaction
name: N-acetylglucosamine 6-phosphate deacetylase
notes: GPR_ASSOCIATION: RSP_1296 GENE_LIST: RSP_1296; SUBSYSTEM: Amino sugar and nucleotide sugar metabolism Equation: N-Acetyl-D-glucosamine 6-phosphate + H2O <=> D-Glucosamine 6-phosphate + Acetate Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#bcdb93c0_58d6_4043_9b09_ed8e526c5da6
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Galactarate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#bb596d2e_3c05_4d2c_b8cd_7d77a312009d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a9e43ff2_6e01_404d_9ce4_2bfc3b23d85d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_859f6fd7_dc49_4983_ad58_183afb744118
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_40c39344_1b9f_40f2_909b_b82e4f736b53
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_90a20f4e_b553_45c0_aebd_8c210f75aa09
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_03909e18_b6cd_4ce3_83de_a1e7d9115127
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3'-GMP[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_36f4016d_77d0_41b5_96c6_a8c550afcfa9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_44ee9082_da99_4351_9c36_2ce20335b78d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7591753f_da1d_41e2_b6df_7d90089eeeea
name: Sodium/Calcium antiporter (1:1)
notes: GPR_ASSOCIATION: RSP_2638 GENE_LIST: RSP_2638; SUBSYSTEM: Transport, inner membrane Equation: Calcium + Sodium[p] <=> <=> Calcium[p] + Sodium Confidence Level: 2
type: Reaction
fast: false
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#b6ae4e14_bf72_40f3_8e98_35890989797b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fa4f3f07_7629_4460_b01f_3fae3f2c8db2
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: O-Phospho-L-serine[e] <=> Confidence Level:
fast: false
reversible: false
name: O-Phospho-L-serine exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_545e4451_94b2_4972_8c30_2ad6c85a1056
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b0f7a0f0_c7a1_48a1_b381_dae6ffd7eae1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_680126d3_a6d1_4c7f_b6ac_bfa24a679d5b
fast: false
notes: GPR_ASSOCIATION: RSP_2107 GENE_LIST: RSP_2107; SUBSYSTEM: Peptidoglycan biosynthesis Equation: Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + UDP-N-acetyl-D-glucosamine <=> Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + UDP + H+ Confidence Level: 2
type: Reaction
name: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#_71425132_36e4_4e4e_8887_6e73bb34bb2f
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a543c1c8_58c7_46c1_aa63_5256ec4793a7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7890cb8d_0e16_4e90_b177_52b053f1de38
fast: false
name: 3-oxoacyl-[acyl-carrier-protein] reductase
notes: GPR_ASSOCIATION: RSP_3888 or RSP_3440 or RSP_3062 or RSP_2538 or RSP_2461 or RSP_2371 or RSP_0610 GENE_LIST: RSP_3888; RSP_3440; RSP_3062; RSP_2538; RSP_2461; RSP_2371; RSP_0610; SUBSYSTEM: Fatty acid biosynthesis Equation: (R)-3-Hydroxyhexanoyl-[acp] + NADP+ <=> 3-Oxohexanoyl-[acp] + NADPH + H+ Confidence Level: 2
type: Reaction
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#c2b54889_e7da_4ce4_9f6b_01d57671b33c
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c6942feb_6cfc_4865_be4c_2500e498fffa
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_056ad8ad_0739_41ba_a97e_cf9ce9dbdb83
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3badd736_2746_4bfb_8ff2_d398974db0a8
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a6b44eda_da4e_4fea_9f16_cf0e4b8b6ddc
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c3df4489_1549_496c_9894_bba5bd0d22c0
reversible: true
notes: GPR_ASSOCIATION: RSP_3330 or RSP_0656 GENE_LIST: RSP_3330; RSP_0656; SUBSYSTEM: Transport, inner membrane Equation: Sulfate[p] + Sodium[p] <=> Sulfate + Sodium Confidence Level: 2
fast: false
name: Sodium/Sulfate symporter
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_62ceb8c4_7d41_47c9_84b7_e8f7ac8ae223
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_90f9b17a_5b26_4ecb_a721_7b613da2c78c
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_338a9a89_880b_4353_875f_83571d2cd366
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5f55a32f_5a99_4c94_a6ef_416f005d671b
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f7fba587_472d_4b35_ab57_72dd8b3b5cbd
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d2a0252a_28a6_465f_9d6f_00dabb3c6006
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c9ce59cd_76b3_4080_a75f_e17cbfc86482
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7747207c_3e1e_4dda_b8b4_713444f1d07f
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a3f33836_782f_4b7d_8721_67f5feb6312d
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Diphosphate[e] <=> Confidence Level:
fast: false
reversible: false
name: Diphosphate exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#d12b25c8_2671_415c_8996_0e2d59f15686
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_44ea6e14_2e63_486c_9f54_49179f08ade9
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: D-Mannose 6-phosphate[e] <=> Confidence Level:
fast: false
reversible: false
name: D-Mannose 6-phosphate exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_072e403f_6742_4a01_9e79_9dc985c0ca3b
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a81815a9_b6b3_40fe_aa83_9b48d7b25532
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a33ed58e_cb18_4397_a0e0_4da3a89c9b7e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_35342e12_4cbf_4e7b_9af7_4ba267b6cd4c
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#dc91a7b3_b909_4cf6_b3c7_8e31a7b04cf3
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1f52b3f1_eb02_4329_9f28_23ed16930696
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ac6500f6_7b6f_4ef2_92e4_e3a6a06a378a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9ab6c59e_78a9_4f67_87f1_84441f61e16f
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a2695e02_e5c0_4dda_a560_d6ddb11be5ee
notes: GPR_ASSOCIATION: RSP_1370 GENE_LIST: RSP_1370; SUBSYSTEM: Starch and sucrose metabolism Equation: Dextrin + 5 H2O <=> 6 D-Glucose Confidence Level: 2
fast: false
reversible: true
name: Dextrin 6-alpha-D-glucanohydrolase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_4dd27594_4ba7_4801_b1ea_0f93e6f7277e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4cdff258_c0e8_456b_af71_de9909e622fa
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_913f75be_e8ce_460d_ab0d_524ba445331a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e1fbafc2_c24c_44d1_a91f_038f05df7f07
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0430b91a_50bd_4bbf_8d9d_40393e1c6640
type: Reaction
name: 3-methylcrotonoyl-CoA carboxylase
reversible: true
notes: GPR_ASSOCIATION: RSP_2509 and RSP_2508 GENE_LIST: RSP_2509; RSP_2508; SUBSYSTEM: Valine, leucine and isoleucine degradation Equation: ATP + 3-Methylcrotonyl-CoA + HCO3- <=> ADP + Orthophosphate + 3-Methylglutaconyl-CoA Confidence Level: 2
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_7c04e4e4_a6f2_424c_8746_de206058296f
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 4-Phospho-L-aspartate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_8a7e731f_54b2_43f2_a2b3_ee690355ca8e
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Glycine[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_2b60bd45_480c_4bd3_84ea_1fd63d7716da
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#aaaeef02_509a_4211_8a83_042afc88453f
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Acetate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_611edb1f_fa4c_4cbc_80ff_e205d2659550
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#aaf29ffb_a472_4fae_bb74_b8653b601e2b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fbf1040b_b274_462e_af9e_86a38728ee2f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3cf02f88_0ee6_4c2e_a4b7_f717375f67e5
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: D-Asparagine[e] <=> Confidence Level:
fast: false
reversible: false
name: D-Asparagine exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#eeaf0dfc_81f1_41f5_884c_57334c2156cf
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Galactono-1,4-lactone
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_804e6bea_560d_4ea2_8e6a_50df229e0f5e
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Diacylglyceryl-N,N,N-trimethylhomoserine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#cfd81269_ff40_407a_9e82_c1c9d70cf3c5
stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Gly-Asp[e] <=> Gly-Asp[p] Confidence Level: 1
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reversible: true
name: Glycyl-L-Aspartic Acid transport via diffusion
type: Reaction

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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Nicotinate[e]
type: Species

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type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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reversible: true
name: enoyl-ACP dehydratase
type: Reaction

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type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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type: Species

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value: 0.0
type: LocalParameter

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notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Sulfur metabolism Equation: Thiosulfate <=> Sulfite + Sulfur Confidence Level: 1
fast: false
reversible: true
name: Thiosulfate/sulfite conversion
type: Reaction

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (S)-Lactaldehyde[p]
type: Species

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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value: 0.0
type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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name: nucleoside hydrolase
notes: GPR_ASSOCIATION: RSP_2914 GENE_LIST: RSP_2914; SUBSYSTEM: Purine metabolism Equation: Inosine + H2O <=> Hypoxanthine + D-Ribose Confidence Level: 2
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notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: 2',3'-Cyclic GMP[e] <=> Confidence Level:
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reversible: false
name: 2',3'-Cyclic GMP exchange
type: Reaction

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type: LocalParameter

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initial concentration: NaN
initial amount: NaN
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type: Species

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has only substance units: false
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initial amount: NaN
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type: Species

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type: LocalParameter

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type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_2894 GENE_LIST: RSP_2894; SUBSYSTEM: Purine metabolism Equation: ATP + GDP <=> ADP + GTP Confidence Level: 2
name: nucleoside diphosphate kinase
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reversible: true

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type: LocalParameter

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type: Species

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type: LocalParameter

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name: L-Homoserine
type: Species

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type: LocalParameter

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initial amount: NaN
name: 1-Hydroxy-2-aminoethylphosphonate
type: Species

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type: SpeciesReference

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type: LocalParameter

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name: 2-Acetolactate
type: Species

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: Species

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type: Reaction

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_1896 GENE_LIST: RSP_1896; SUBSYSTEM: Purine metabolism Equation: Guanine + H2O + H+ <=> Xanthine + NH3 Confidence Level: 2
name: guanine deaminase

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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name: Adenine transport via diffusion
type: Reaction

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stoichiometry: 1.0
type: SpeciesReference

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notes: GPR_ASSOCIATION: RSP_2176 GENE_LIST: RSP_2176; SUBSYSTEM: Alanine, aspartate and glutamate metabolism Equation: L-3-Amino-isobutanoate + 2-Oxoglutarate <=> (S)-Methylmalonate semialdehyde + L-Glutamate Confidence Level: 2
fast: false
name: aminotransferase
type: Reaction
reversible: true

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4f2d883c_fd1e_462f_97eb_fb71199bd31f
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4ed31b82_f244_452b_8887_e59c04ce08e2
notes: GPR_ASSOCIATION: RSP_2196 GENE_LIST: RSP_2196; SUBSYSTEM: Fatty acid metabolism Equation: (S)-Hydroxydecanoyl-CoA <=> trans-Dec-2-enoyl-CoA + H2O Confidence Level: 2
fast: false
reversible: true
name: enoyl-CoA hydratase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#fa1285c4_b896_47f1_a559_8ca96f215045
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_28d82390_3ef0_498e_9e98_c13df159cd02
stoichiometry: 1.0
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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_926050bc_aeed_4772_b553_e59fc23b6dab
stoichiometry: 1.0
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type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e79251e9_ac3c_47a7_87c8_5350659430e7
stoichiometry: 1.0
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http://identifiers.org/biomodels.db/MODEL1304240000#_1cc31059_30be_4053_b45d_28f882fa94d5
stoichiometry: 1.0
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stoichiometry: 1.0
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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Benzoate
type: Species

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
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stoichiometry: 1.0
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stoichiometry: 1.0
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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_17323ac8_e950_4db8_9ffb_917a737847dd
value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_837145ae_c0d6_4413_9c3f_c0181f981e23
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f2394380_b9f9_4b00_8500_1087e570c4ae
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a19a14c5_c6ff_4618_9e46_a2a115d46159
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_71bbf140_bfe3_4db3_9137_9811e6ac5fd9
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_270ef921_6780_4bda_b6a1_1c66de4840b5
stoichiometry: 1.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_851349de_7000_4353_9979_b19cebe83e30
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: D-Alanyl-D-alanine[e] <=> Confidence Level:
fast: false
reversible: false
name: D-Alanyl-D-alanine exchange
type: Reaction

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 4-Hydroxyphenylacetaldehyde
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_5ce93ad9_a4e0_4212_ab98_937427c33e37
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_66739918_81b0_4a3e_ae23_8d1f1cf0db3d
stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 4-Aminobutyraldehyde
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_93e1dd05_e59a_4e35_9e60_e0cefb5bddc4
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6bc65140_dcd4_42e9_9bda_a143c66679d0
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Hydrogensulfide[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#f12fdf83_3528_4285_81ae_688662a81610
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_6293cb89_ed5d_43db_b9bf_fbb36a58e324
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3714d20f_0802_4bcf_a576_ff65387f686c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Chitobiose
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#cceedef2_0ce8_4491_aa6d_25c40dcc441b
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_509faeef_5e6b_480a_99b8_204d6e944bae
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fd401add_e0d8_49fb_abf9_77c770a70ed1
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Alanine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#bfa02a3d_bab4_411b_801d_1d9a9c35052a
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: D-Glucose 6-phosphate[e] <=> D-Glucose 6-phosphate[p] Confidence Level: 1
fast: false
reversible: true
name: D-Glucose 6-phosphate transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_6b8f3c43_354d_461b_a764_2351f02f2096
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0219a382_8363_45d2_975a_caf3767daa1d
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: CO2[p]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Dimethylsulfide[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#de7933cd_0b3f_41f2_bf53_cd47d86a8aec
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c2166726_f88a_4f2d_a217_6bacefe40ed4
value: 1000.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_89f104ee_a9e1_4de3_af02_446ea0893e3f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1db1f0d6_be1c_48ad_8e97_d609d341a025
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9fcb9f9d_cffb_4d7f_be8a_3dc4959bb754
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9cdba428_8456_438b_994f_bdef386f44e6
stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b663f54c_e4a7_4d4d_b6e8_9b0434441c5a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b8970d95_8885_48ab_bd91_9e5c0f2c80f1
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: fructose[e] <=> fructose[p] Confidence Level: 2
fast: false
reversible: true
name: D-fructose transport via diffusion
type: Reaction

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stoichiometry: 1.0
type: SpeciesReference

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notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: 3-Hydroxypropanoate[e] <=> 3-Hydroxypropanoate[p] Confidence Level: 2
fast: false
reversible: true
name: 3-Hydroxypropanoate transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#c829a810_5799_436e_9f5b_278de40fe10c
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Fe2[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_174cc7be_36ff_4faa_84ba_cd2f747ccf58
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5a2d029c_4d3c_426a_bf2f_41f977c8053d
stoichiometry: 0.562158734565962
type: SpeciesReference

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fast: false
name: Xanthosine transport via proton symport
reversible: true
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: Xanthosine[p] + H+[p] <=> Xanthosine + H+ Confidence Level: 1
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_70ee268f_25a0_4de1_9f2f_863e2eb2d9c9
notes: GPR_ASSOCIATION: RSP_0272 GENE_LIST: RSP_0272; SUBSYSTEM: Carotenoid biosynthesis Equation: Hydroxyspheroidene + 2 Reduced ferredoxin + 2 Oxygen + 4 H+ <=> Hydroxyspheroidenone + 2 Oxidized ferredoxin + 3 H2O Confidence Level: 3
reversible: false
fast: false
name: spheroidene monooxygenase
type: Reaction

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

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stoichiometry: 1.0
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notes: GPR_ASSOCIATION: RSP_0882 or RSP_4002 or RSP_3456 or RSP_3408 GENE_LIST: RSP_0882; RSP_4002; RSP_3456; RSP_3408; SUBSYSTEM: Lysine biosynthesis Equation: L-Aspartate 4-semialdehyde + Pyruvate <=> L-2,3-Dihydrodipicolinate + H+ Confidence Level: 2
name: dihydrodipicolinate synthase
reversible: false
fast: false
type: Reaction

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type: SpeciesReference

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fast: false
reversible: false
type: Reaction
name: prephenate dehydratase
notes: GPR_ASSOCIATION: RSP_0706 GENE_LIST: RSP_0706; SUBSYSTEM: Phenylalanine, tyrosine and tryptophan biosynthesis Equation: L-Arogenate + H+ <=> L-Phenylalanine + H2O + CO2 Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#c17277e6_0f0b_4570_8f8d_31fe16a140e5
stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

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stoichiometry: 1.0
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stoichiometry: 1.0
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http://identifiers.org/biomodels.db/MODEL1304240000#c8ed36e2_33dc_46f8_977f_c75a25da6564
value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: glutathione[e] <=> Confidence Level:
fast: false
reversible: false
name: glutathione exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_9326f88c_6382_4c9e_a877_8c0247b00403
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Deoxy-D-glucose
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_8110e24c_96c2_4071_b9ab_deaa0ecdd2db
stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: myo-Inositol
type: Species

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a82155be_be0e_471d_aa4e_83ee330cffa7
value: -1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Glutamate
type: Species

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value: 0.0
type: LocalParameter

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notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Ala-Thr[e] <=> Confidence Level:
fast: false
reversible: false
name: Ala-Thr exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#b0cf21e4_f8a6_4168_8cc7_62716dfa5259
stoichiometry: 1.0
type: SpeciesReference

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notes: GPR_ASSOCIATION: RSP_0812 GENE_LIST: RSP_0812; SUBSYSTEM: Propanoate metabolism Equation: (2S)-Ethylmalonyl-CoA <=> (2R)-Ethylmalonyl-CoA Confidence Level: 4
fast: false
reversible: true
name: methylmalonyl-CoA epimerase/ethylmalonyl-CoA epimerase
type: Reaction

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 2.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Glucuronate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_71373ed9_f88d_459e_8203_acbf4d0ac695
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8cad342e_fe8f_450e_bc50_af19225a4e8a
stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Ribitol[e]
type: Species

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1c482dcb_9dfd_4004_94f8_e1689854206e
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
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notes: GPR_ASSOCIATION: RSP_1869 or RSP_1492 GENE_LIST: RSP_1869; RSP_1492; SUBSYSTEM: Ubiquinone and other terpenoid-quinone biosynthesis Equation: 2-Octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone + Oxygen + NADPH + H+ <=> 2-Octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone + NADP+ + H2O Confidence Level: 2
reversible: false
name: 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase / 2-octaprenyl-6-methoxyphenol hydroxylase
type: Reaction
fast: false

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_81f5f618_96ee_47ec_bfc9_607343d4dded
stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: 3-Oxalomalate[e] <=> 3-Oxalomalate[p] Confidence Level: 1
fast: false
reversible: true
name: 3-Oxalomalate transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#c95d57c8_e77b_4785_bcf8_84ae0ed53429
stoichiometry: 1.0
type: SpeciesReference

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notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: dTMP[e] <=> Confidence Level:
fast: false
reversible: false
name: dTMP exchange
type: Reaction

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (R)-4'-Phosphopantothenoyl-L-cysteine
type: Species

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Cobaltion
type: Species

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Creatine[e] <=> Confidence Level:
fast: false
reversible: false
name: Creatine exchange
type: Reaction

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Dihydrolipoylprotein
type: Species

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value: -1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: CMP[p]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

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notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Chitobiose[e] <=> Confidence Level:
fast: false
reversible: false
name: Chitobiose exchange
type: Reaction

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Methionine[p]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Lysine[e]
type: Species

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_505b20bd_0268_47d6_83d3_38ea4728dcc5
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#dd447137_15aa_4a97_880b_0ecc182b8073
value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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boundary condition: true
has only substance units: false
initial concentration: NaN
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type: LocalParameter

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value: 0.0
type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
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type: Species

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value: 1000.0
type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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stoichiometry: 1.0
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value: -1000.0
type: LocalParameter

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stoichiometry: 1.0
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type: LocalParameter

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stoichiometry: 1.0
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type: LocalParameter

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type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#af3901da_56ad_49cd_9b01_824cc642520f
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type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ac36195d_1ac9_4466_8a6c_bf1914139a28
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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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value: 1000.0
type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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has only substance units: false
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type: Species

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type: LocalParameter

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reversible: false
name: ABC Nicotinate transporter
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notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + Nicotinate[p] <=> ADP + H+ + Orthophosphate + Nicotinate Confidence Level: 1

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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reversible: false
type: Reaction
fast: false
notes: GPR_ASSOCIATION: RSP_1766 or RSP_1848 GENE_LIST: RSP_1766; RSP_1848; SUBSYSTEM: Glycolysis / Gluconeogenesis Equation: ADP + Phosphoenolpyruvate + H+ <=> ATP + Pyruvate Confidence Level: 4
name: pyruvate kinase

http://identifiers.org/biomodels.db/MODEL1304240000#_19283de6_ca15_4fac_b379_dd138ddb1edc
stoichiometry: 1.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8296416e_f602_42eb_a188_f10eef52350f
value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Ornithine[e]
type: Species

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value: -1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bbd1c280_bb53_4cc0_8a96_156af03dd5c2
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Malonate[p]
type: Species

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Calcium[e]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Ethanolamine phosphate
type: Species

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Cys-Gly[e] <=> Confidence Level:
fast: false
reversible: false
name: Cys-Gly exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#a538f18a_9783_42a2_a176_1a1de740cf18
fast: false
name: phosphoribosylaminoimidazolecarboxamide formyltransferase
type: Reaction
reversible: true
notes: GPR_ASSOCIATION: RSP_1100 GENE_LIST: RSP_1100; SUBSYSTEM: Purine metabolism Equation: 10-Formyltetrahydrofolate + 1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide <=> Tetrahydrofolate + 1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#_93614fdc_37bd_496f_8a59_050367ea25f6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-O-Phosphoserine[e]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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type: Reaction
notes: GPR_ASSOCIATION: RSP_0156 GENE_LIST: RSP_0156; SUBSYSTEM: Fatty acid biosynthesis Equation: Decanoyl-CoA + FAD <=> trans-Dec-2-enoyl-CoA + FADH2 Confidence Level: 2
name: Acyl-CoA dehydrogenase

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Aminopropanal
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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type: Reaction
notes: GPR_ASSOCIATION: RSP_3174 GENE_LIST: RSP_3174; SUBSYSTEM: Transport, inner membrane Equation: Xanthine[p] + Sodium[p] <=> Xanthine + Sodium Confidence Level: 2
reversible: false
name: Xanthine via Na+ symport

http://identifiers.org/biomodels.db/MODEL1304240000#_096e6be7_015a_4f36_812c_f32ae7ec7a74
notes: GPR_ASSOCIATION: RSP_1865 GENE_LIST: RSP_1865; SUBSYSTEM: Valine, leucine and isoleucine biosynthesis Equation: (S)-2-Aceto-2-hydroxybutanoate <=> (R)-3-Hydroxy-3-methyl-2-oxopentanoate Confidence Level: 2
fast: false
reversible: true
name: ketol-acid reductoisomerase
type: Reaction

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value: 0.0
type: LocalParameter

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type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Threonine O-3-phosphate
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (-)-Ureidoglycolate
type: Species

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type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3'-AMP
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Deoxy-D-glucose 6-phosphate
type: Species

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type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Cysteine[e]
type: Species

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: FMN
type: Species

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3,4-Dihydroanhydrorhodovibrin
type: Species

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value: -1000.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Methylbutanoyl-CoA
type: Species

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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stoichiometry: 0.0105866653787653
type: SpeciesReference

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value: -1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: heme[e] <=> Confidence Level:
fast: false
reversible: false
name: heme exchange
type: Reaction

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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type: Reaction
reversible: true
name: thiamine diphosphokinase
fast: false
notes: GPR_ASSOCIATION: RSP_0363 GENE_LIST: RSP_0363; SUBSYSTEM: Thiamine metabolism Equation: ATP + Thiamine <=> AMP + Thiamin diphosphate Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#_8a996361_0ab5_45a2_90f8_2e8db4252e3f
stoichiometry: 1.0
type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (R)-Lactate
type: Species

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Sulfite[e] <=> Sulfite[p] Confidence Level: 2
fast: false
reversible: true
name: Sulfite transport via diffusion
type: Reaction

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3'-GMP
type: Species

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type: SpeciesReference

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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reversible: false
notes: GPR_ASSOCIATION: RSP_0599 GENE_LIST: RSP_0599; SUBSYSTEM: Pantothenate and CoA biosynthesis Equation: (R)-4'-Phosphopantothenoyl-L-cysteine + H+ <=> Pantetheine 4'-phosphate + CO2 Confidence Level: 2
fast: false
type: Reaction

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: spermidine[e] <=> Confidence Level:
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value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e89169dc_ad7e_476a_9fc3_30b89a0a19ad
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e227c288_9bd2_499a_ba61_19746a9ca8f1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c8a5b3bf_eaad_443e_9655_8c18393e4429
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-carnitine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_0323ea0d_8c38_493e_932e_731212c98836
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (R)-Pantoate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#dbd91c5c_a440_42db_a6e9_5e7f084b270d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3988c4f2_5166_4ddc_a2b8_e8a4488df035
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (R)-Lactate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_14a61b32_165a_4739_87ae_3c7d45de4565
stoichiometry: 1.29E-4
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_53c27505_956d_437e_bda7_0367910db4d2
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9ced1b14_5aeb_45df_894c_1d6b0c6e2475
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Histidyl-tRNA(His)
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_1c4aee9f_f6d1_471f_9771_ad0cb59a0ffa
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_44a1761a_5629_45b4_acbc_48901c82f6b5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Histidinolphosphate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#c59ffcc2_64d5_4f8a_ad9b_490c7d76d2b9
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Glycine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#cdb9cf9a_acd0_40be_85c4_3bdd5441e3e1
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ef975f89_ee08_4f1d_876d_a16aa0622957
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: dTDP-glucose
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#ed04e6f9_b477_4c2d_ba53_3958be5c4eef
reversible: true
notes: GPR_ASSOCIATION: RSP_0272 GENE_LIST: RSP_0272; SUBSYSTEM: Carotenoid biosynthesis Equation: Spirilloxanthin + 2 Reduced ferredoxin + 2 Oxygen + 4 H+ <=> 2-Ketospirilloxanthin + 2 Oxidized ferredoxin + 3 H2O Confidence Level: 3
fast: false
type: Reaction
name: spheroidene monooxygenase

http://identifiers.org/biomodels.db/MODEL1304240000#a435eba0_5f0b_4b6e_a70a_001967c195a7
notes: GPR_ASSOCIATION: RSP_1831 GENE_LIST: RSP_1831; SUBSYSTEM: Glycine, serine and threonine metabolism Equation: O-Phospho-L-homoserine + H2O <=> L-Threonine + Orthophosphate Confidence Level: 2
name: threonine synthase
reversible: false
fast: false
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_074fe535_3d19_4e60_bb1e_13c127d5ba17
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Cysteine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b70812a3_408a_43ac_8e03_760a42f6a0e5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d91a9247_19a6_4c18_b470_b9736dae22cd
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b95f18e3_04e5_4990_968b_8b230667206c
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3ba163b6_5634_437c_83bd_528c48a78c54
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0bca1f86_ac20_4f12_8abb_d8a09cb77819
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#baee2b2b_782d_4a23_a1be_52dd2121f370
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e1d2d2fd_0973_4b7b_9375_264567acc6e0
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: (R)-Lactate[e] <=> (R)-Lactate[p] Confidence Level: 2
fast: false
reversible: true
name: (R)-Lactate transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_54dc0a8e_894b_49fe_8386_4e6503adf70f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_15cc1a95_2fb3_4aae_ba52_20d4cb805280
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3db3659b_d8f0_4e14_ae6b_c1d6a3ebdfe2
notes: GPR_ASSOCIATION: RSP_3844 or RSP_0514 or RSP_0160 GENE_LIST: RSP_3844; RSP_0514; RSP_0160; SUBSYSTEM: Polyketide sugar unit biosynthesis Equation: DTDP-glucose <=> 4,6-Dideoxy-4-oxo-dTDP-D-glucose + H2O Confidence Level: 2
fast: false
reversible: false
name: dTDP-glucose 4,6-dehydratase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_96f7d18d_05a0_4493_9f1d_bbbfe958daee
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6f4a2ebc_a758_475d_af18_5056f2b6c361
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#feeb35e0_da42_4ffc_bcb3_780533970195
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_55cafe59_d0ad_45c4_8d17_373a7a1eac0f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f72dbb3f_e9af_48cb_8b6a_1550303e8ce1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_468dd62b_51e1_45c6_a996_15c21492bb65
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e73f8c78_57cf_41ce_9843_3476175b3a4f
fast: false
reversible: false
name: 3-hydroxybutyryl-CoA dehydrogenase
notes: GPR_ASSOCIATION: RSP_1687 or RSP_2196 GENE_LIST: RSP_1687; RSP_2196; SUBSYSTEM: PHB Synthesis Equation: (S)-3-Hydroxybutanoyl-CoA + NAD+ <=> Acetoacetyl-CoA + NADH + H+ Confidence Level: 4
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#a61c48ac_54dc_429b_bdf8_b9007b54049a
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 4-Hydroxy-2-oxoglutarate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_6ed26d4c_c38c_499f_a273_4c9429a7d109
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ed87442d_6462_484c_b635_348bd93c2263
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-threo-Aldono-1,5-lactone
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_3e60be82_d81f_4707_9ca4_eaaf4bc1d3e4
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3ca344db_6224_46e9_a77d_05984af34fd5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ab4bcead_68db_4e6c_9929_e891c2f4109f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_401a0ee8_7de8_4602_a3ab_d28171c9f80b
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Galacturonate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_15b7373c_8da7_482f_b182_5cca33eda811
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c6100e6a_6849_4fd2_a9f4_5c88cc9d60bc
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ff21f208_3c36_4ca2_b8f1_ed13ada1d0b3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1ed89868_2100_42b4_8a04_85a24a4ab4e4
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ed760d63_820a_404d_8659_fc05e0fb801f
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bf92a7b8_c904_4837_a816_79c9f1045399
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b0fc6ed7_fd50_476d_b8f5_dbbe1d6304d9
fast: false
reversible: true
notes: GPR_ASSOCIATION: RSP_0723 GENE_LIST: RSP_0723; SUBSYSTEM: Alanine, aspartate and glutamate metabolism Equation: L-Alanine + NAD+ + H2O <=> Pyruvate + NH3 + NADH + H+ Confidence Level: 3
name: L-alanine dehydrogenase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_548f1d58_348c_481b_b77d_c34b5a479029
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f14878cb_5ab2_478a_906d_8f23074b6806
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_74ff87fd_5fa6_4103_a94a_b79011529163
notes: GPR_ASSOCIATION: RSP_0267 GENE_LIST: RSP_0267; SUBSYSTEM: Carotenoid biosynthesis Equation: Spheroidene + H2O <=> Hydroxyspheroidene Confidence Level: 3
fast: false
reversible: true
name: hydroxyneurosporene synthase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_62f468b7_12f4_467c_bff5_ff1143d7a5f3
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c6f25a4f_07cf_4634_8fad_de15cc8c20a9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_79327699_2f5f_4f44_9294_7eae0f503c54
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_994304d7_d90a_42b5_9972_5d685e5766ca
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (R)-2,3-Dihydroxy-3-methylpentanoate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_413f5953_0a49_4ce0_b6ae_befb6d91384d
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ee6d968f_6eb7_46a5_8379_3b8b77b0337a
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + L-Alaninamide[p] <=> ADP + H+ + Orthophosphate + L-Alaninamide Confidence Level: 1
fast: false
reversible: false
type: Reaction
name: ABC L-Alaninamide transporter

http://identifiers.org/biomodels.db/MODEL1304240000#e57291d0_8993_4510_a0bf_88a5a974b30b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#beec2616_f059_4428_b5d1_cf0abf2c8a49
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#be35048f_f299_466a_8a3d_e20644f2a811
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0314720e_f9b3_4e96_b2cc_b5afc502e9b8
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#dc55aff1_7598_42d5_a0bf_42253837c14c
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c08eb806_5e44_42a6_b431_cee3ee252942
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#dc99de50_71e7_4279_8ce7_ca465ac5610d
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#be17e851_aeec_4428_9257_27051b607fa5
fast: false
notes: GPR_ASSOCIATION: RSP_2372 GENE_LIST: RSP_2372; SUBSYSTEM: Pyruvate metabolism Equation: (S)-Lactaldehyde + NAD+ + H2O <=> (S)-Lactate + NADH + 2 H+ Confidence Level: 2
type: Reaction
name: aldehyde dehydrogenase
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#_1da5c2ef_90d9_4a24_8731_d78a8a1162fc
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fe0d4a8e_3771_4705_a748_b092cdde4f85
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d478c13f_838a_4fea_bf28_334dca02cec5
reversible: true
type: Reaction
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Cysteine and methionine metabolism Equation: Acetyl-CoA + L-Homoserine <=> CoA + O-Acetyl-L-homoserine Confidence Level: 1
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_1f757bda_4497_4bba_acc6_75622b5509fc
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e9185048_6be6_4441_a943_786bb32d2894
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: NADPH
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b9744c71_7606_4a93_859a_1cdf240894b2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: putrescine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b5a218da_50d3_4465_bc31_d25b38c762e2
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Agmatine[e] <=> Confidence Level:
fast: false
reversible: false
name: Agmatine exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#f57b40cd_4634_44f3_a1bf_55e622f3c1dc
type: Reaction
reversible: true
notes: GPR_ASSOCIATION: RSP_0900 or RSP_2793 GENE_LIST: RSP_0900; RSP_2793; SUBSYSTEM: Nitrogen metabolism Equation: Reduced ferredoxin + NAD+ + H+ <=> Oxidized ferredoxin + NADH Confidence Level: 2
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#a3dad406_aee8_492f_8413_f0366d43353e
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e512cf42_ec29_43ec_a851_0ea20b003299
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f06f8a5e_b42d_424f_a3e6_bf2ec47889d4
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e7b6c4a2_9702_4421_843d_9e753be3b93a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4462821d_7225_4b68_893c_68f2b1d5533f
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Phosphoenolpyruvate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#c103da53_4dde_4d84_82e4_3ce5606f6465
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1bee1344_a829_429f_94f5_22ae523947ee
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#cfa638d2_7cca_473a_8363_39a64e82c333
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (2E)-5-Methylhexa-2,4-dienoyl-CoA
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_9b88bc45_3926_4b89_819f_01e5d436ad1a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b2eefcc0_9617_4f18_8514_42b8499b2cce
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Formate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_948fb3f5_f665_4fec_b40a_49e269b98ab9
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Molybdate[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#c80b1b16_2693_4715_baad_6fb90be8025f
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_36bc2870_03c5_41cb_96b2_37cb94bdce3d
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8bbbfeb2_f7b0_4108_ad12_539e82cf70d5
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c3869ae0_aa44_40ca_a9ad_61ce1b6a21cf
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a70a02ed_0f3d_45a4_9891_7247a23091de
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0b2000b8_97f6_4c64_b3b4_f37e900a6d5f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6302a173_7590_4fad_8149_8fc10794c096
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ea1634e3_b990_4fda_b4a8_2f98d1de9526
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a7857481_57ca_41d4_96b0_d99f5c9f2b72
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0afcfc8f_50fb_41eb_98ac_8f6ad6b1ef09
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a88ea4c0_d730_47d2_ac72_a904fbdbb2f6
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_52a67e90_c7ff_42ab_a166_59e31ef04efd
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Acetyl-CoA
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_1ddfa70b_4e98_4e06_a11e_91c08de3aef4
fast: false
reversible: false
notes: GPR_ASSOCIATION: RSP_1766 or RSP_1848 GENE_LIST: RSP_1766; RSP_1848; SUBSYSTEM: Glycolysis / Gluconeogenesis Equation: GDP + Phosphoenolpyruvate + H+ <=> GTP + Pyruvate Confidence Level: 4
name: pyruvate kinase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_798ad9c2_aba7_4164_bb89_ebda0f938cb3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_443b2ab4_cce7_4817_a5b6_f7f5fe723b4f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7758dc57_a9ae_41cf_9c23_6f712c25d2c4
notes: GPR_ASSOCIATION: RSP_1389 GENE_LIST: RSP_1389; SUBSYSTEM: Phenylalanine, tyrosine and tryptophan biosynthesis Equation: 5-O-(1-Carboxyvinyl)-3-phosphoshikimate <=> Chorismate + Orthophosphate Confidence Level: 2
fast: false
reversible: false
name: chorismate synthase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_1e2aba21_249a_422f_8600_90aa5418f183
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Acetoin
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#d5bd7100_0585_4208_b8c2_e64341559273
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_96e8e6bf_4e5e_4e51_8525_caed1ac87a46
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fa3f85cc_41b3_4413_b1ad_5c7b3554211b
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_118e60fd_7fd3_4812_b2da_32f53caafba2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1151acc0_2467_42f5_8f5f_737a624d97fb
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b90b0972_6e6d_423b_b46b_55c47b212a3b
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Alanine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_3b0519ad_b47a_4e3d_a1a6_47771be0ddde
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c15e36d0_64ee_4840_a306_0cfd9331bf7d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e4c98e2c_e794_4dea_8111_e6a192a8d999
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#de23a0a9_ff65_4ddd_9a4f_09177b7c1394
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_80447ecd_758a_4e4e_944f_76e63c761a15
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_88b76934_8d7f_4e6b_a68f_606c9bc69099
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Cys-Gly[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_7af8b8b0_82d3_49dc_8799_4574bb2004c8
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5f0e93e1_e7fb_43f9_b61b_ed80c8142f03
name: adenosylcobinamide kinase
fast: false
type: Reaction
reversible: true
notes: GPR_ASSOCIATION: RSP_0602 GENE_LIST: RSP_0602; SUBSYSTEM: Porphyrin and chlorophyll metabolism Equation: Adenosyl cobinamide phosphate + GTP + H+ <=> Adenosine-GDP-cobinamide + Diphosphate Confidence Level: 3

http://identifiers.org/biomodels.db/MODEL1304240000#a79baff0_65f6_4dae_9a8d_f2ae383fee22
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a46c5632_0c14_41e1_ad9f_c27a84d86d6a
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_592280bc_90db_47a4_903b_f3fc14b11663
stoichiometry: 0.162794340704026
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_02f76ac3_4686_40bc_9454_97331e2b619a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d0004360_2a45_4781_94b5_7bed92a0c450
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_09ab15a8_9eb3_4952_a9cf_fd16307cf3d5
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b025353e_2cb2_4b7c_a264_d58741cd90be
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f810bea4_ef4c_4602_9197_d5b52cd89985
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d17c360b_32c6_42ce_adc7_46c0a9b5cb42
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Tetrahydrofolyl-[Glu](2)
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_0850e5cd_d6a8_4f4c_b3a6_ed59003a112f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7bf9b3d3_9665_4bdb_bf82_dc60bbc578be
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d6c36bca_45ce_46e8_95dc_7ea0387ccabb
reversible: false
type: Reaction
name: ABC zinc transporter
fast: false
notes: GPR_ASSOCIATION: RSP_3571 and RSP_3567 and RSP_3568 GENE_LIST: RSP_3571; RSP_3567; RSP_3568; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + zinc[p] <=> ADP + H+ + Orthophosphate + zinc Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#f33398f6_9663_464a_9b81_ff590cefeb3f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5fe9ebe2_401e_4efe_ad87_59a9bd3f535d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_379f0c07_f59d_44de_8100_c90275ffa496
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#df0e6e03_fe58_4718_8403_bb90f76ee5f9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_07944722_e15f_401f_a7df_b979bdb0ea90
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f736cccb_576b_4f09_99e9_edadd566d2dc
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_00ecd977_5b3f_4e47_b6c7_23e8e5362094
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a5bcf037_02fa_4c2a_bb98_f6b081036156
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f2024620_6a18_4d93_b1dc_2ad10924b2e2
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Adenine[e] <=> Confidence Level:
fast: false
reversible: false
name: Adenine exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_8c1f7461_1a96_4742_9e62_5feeb6fa70b9
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6baccfd2_df30_43d4_9edd_174d13296b72
name: nucleoside hydrolase
reversible: true
type: Reaction
notes: GPR_ASSOCIATION: RSP_2914 GENE_LIST: RSP_2914; SUBSYSTEM: Purine metabolism Equation: Guanosine + H2O <=> Guanine + D-Ribose Confidence Level: 2
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#ca1f7276_8762_4f9a_9ba0_2f470676d021
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f555acae_a470_4ca5_bbaa_47e8a914eb4e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6aa24ffe_7b47_4c07_afc2_954da6bf254b
name: UDP-glucose 6-dehydrogenase
fast: false
reversible: true
notes: GPR_ASSOCIATION: RSP_0653 GENE_LIST: RSP_0653; SUBSYSTEM: Amino sugar and nucleotide sugar metabolism Equation: UDP-glucose + H2O + 2 NAD+ <=> UDP-glucuronate + 2 NADH + 3 H+ Confidence Level: 2
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_517d3af3_3c02_43d8_a6da_36f015a6bc63
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: GMP[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#a03f0f45_71ac_4f32_a1b0_63b808e14b17
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3212a4b4_30ac_48be_9eb7_05e1d60e3703
notes: GPR_ASSOCIATION: RSP_0812 GENE_LIST: RSP_0812; SUBSYSTEM: Propanoate metabolism Equation: (R)-Methylmalonyl-CoA <=> (S)-Methylmalonyl-CoA Confidence Level: 4
fast: false
reversible: true
name: methylmalonyl-CoA epimerase/ethylmalonyl-CoA epimerase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_3581b688_a1ef_41a3_a872_870d0c54d50d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9c4bc2e0_eb9e_4a69_94dc_bbb46072d63b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f2a71618_7176_49ea_8a0f_56c4ef99da2f
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Phosphoenolpyruvate[e] <=> Phosphoenolpyruvate[p] Confidence Level: 1
fast: false
reversible: true
name: Phosphoenolpyruvate transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#c7226525_43c9_492c_8655_9ee21cd7d424
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f56c8a69_9b08_4909_ac37_fb3bcabc094c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ea060308_0986_4618_91f7_489002187871
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_388e864f_1239_4469_8331_0cad8c323402
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_54d5e10a_b9ad_443d_8eba_afb27bcd8216
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fc198044_635a_4bc6_8f97_484db4a973e4
type: Reaction
reversible: false
notes: GPR_ASSOCIATION: RSP_1217 or RSP_1593 GENE_LIST: RSP_1217; RSP_1593; SUBSYSTEM: Pyruvate metabolism Equation: Oxaloacetate + H+ <=> Pyruvate + CO2 Confidence Level: 2
fast: false
name: oxaloacetate carboxy-lyase (pyruvate-forming)

http://identifiers.org/biomodels.db/MODEL1304240000#_8a5bc8e2_a223_4267_8d59_e3149038049a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f6714c95_7cf0_46ce_bb23_7d5e630ed7bb
name: phosphoadenosine phosphosulfate reductase
type: Reaction
fast: false
notes: GPR_ASSOCIATION: RSP_1941 GENE_LIST: RSP_1941; SUBSYSTEM: Sulfur metabolism Equation: Thioredoxin + 3'-Phosphoadenylyl sulfate <=> Thioredoxin disulfide + Sulfite + Adenosine 3',5'-bisphosphate Confidence Level: 2
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#_1bd78990_ef9a_4dd5_8e0c_df8130a5824e
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8efbe1b4_c210_498a_8644_08650ec8b808
reversible: true
fast: false
notes: GPR_ASSOCIATION: RSP_2894 GENE_LIST: RSP_2894; SUBSYSTEM: Pyrimidine metabolism Equation: ATP + dCDP <=> ADP + dCTP Confidence Level: 2
name: nucleoside diphosphate kinase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#cc0e4272_9ed0_425f_a531_631d3570c65a
reversible: false
name: Uridine ABC transporter
notes: GPR_ASSOCIATION: RSP_2208 and RSP_2209 and RSP_2210 and RSP_2211 GENE_LIST: RSP_2208; RSP_2209; RSP_2210; RSP_2211; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + Uridine[p] <=> ADP + H+ + Orthophosphate + Uridine Confidence Level: 4
fast: false
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_39b9269b_83e5_4875_8958_0967f50ce073
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6fad528a_bc0e_4108_b591_eec3bc21b86c
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fe3c094d_0cca_420c_a8e5_f9c0b9323499
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_718407d9_1245_41d6_839d_0299f09fef3a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_70aa753e_fa40_4968_a8a7_84cc2d6390e0
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9aacd1fb_206e_488b_a169_313779b0df4e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4f8b947e_bd9c_4da3_9058_03ec91b5787f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d15d455e_98b9_4787_8867_dbeff28fd06e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f3a079d9_2be5_43b4_a941_da808985294f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5b322535_db25_4eff_8877_5144da24d22b
name: N-acetylglucosamine kinase
notes: GPR_ASSOCIATION: RSP_1405 GENE_LIST: RSP_1405; SUBSYSTEM: Amino sugar and nucleotide sugar metabolism Equation: ATP + N-Acetyl-D-glucosamine <=> ADP + N-Acetyl-D-glucosamine 6-phosphate + H+ Confidence Level: 2
type: Reaction
fast: false
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#b856108a_ffd5_441c_b8b6_e07dce4c7797
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3b3d04d7_4397_4824_93c2_61737c56b152
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ae6ba046_10d5_497b_b1da_8bf10209ca88
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fe8b3c65_f187_45ba_99f3_df72c8263cc1
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_86fdc3d3_9dd9_4e64_a73e_3b22172dc1eb
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Heme[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_8bb3c4be_f5b8_4cb7_bc1d_eccdd1f29150
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7c2fca23_c334_4435_9132_1a24668ed126
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d235facc_dae8_4de6_87e1_d8bb4518bc23
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f1758fdd_48be_460a_8329_ef774dd8b63a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_96d79570_9063_4924_9274_5c7f4becb520
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: 2-Deoxy-D-glucose[e] <=> Confidence Level:
fast: false
reversible: false
name: 2-Deoxy-D-glucose exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_22bca080_4471_432b_91d5_64b5f33c3f5d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a2a05fdb_db51_4715_bbb3_fcc4027d0dd9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_264724b2_1004_45a3_854b_5e36fc96ea76
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_69aaaa54_9bf1_4573_8cef_c37919b45cba
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Cytosine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#fab09fd9_639f_42f5_ba3e_3e1cad78e269
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7c82536e_07bf_4991_90a5_621a9f227c1b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5580d222_d175_412f_9432_b57b8b107ee5
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6ef0d765_a45c_4252_a680_fa25124e00ad
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1e160f09_f499_447c_99c7_45433a2b4b1c
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f956bb5f_e46e_4fb6_a7a8_46bdd6841f01
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#eeaa71af_3d00_44fa_ab43_ec65a2b658e0
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_306c2b63_7c03_452e_bc06_2f83ed9a34e2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_60146da9_1d6e_4fd1_90d9_c60b4b218181
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: GMP[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_50eb5c43_79d0_4043_9abe_78f364543d2f
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Oxopentanoicacid
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_5ede6436_db05_4811_aead_e334a3d96a57
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1a119c32_488e_4249_ab46_3808b066d637
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_63623a40_2516_4e5d_9ba0_33625d3a8dea
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b1d212a3_89f3_466d_a569_00bb9e5f090b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_09e5c639_3882_4756_b810_d7f54ca25dbc
stoichiometry: 5.0E-5
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a17d6863_daf4_4ce4_af31_2896d72195dc
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_52250a9a_b413_4f31_a72e_ea731af0f175
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_801cfe0c_09ab_4181_b4bb_05f189302743
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3b80e719_22b3_40d4_85a6_fc35bb812d48
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Ala-Glu[e] <=> Confidence Level:
fast: false
reversible: false
name: Ala-Glu exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_995950ac_b3e2_40c9_9712_960cde3bcf35
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4122ad5a_fbd4_4f13_91ff_60d5a27924c0
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ca476165_7c66_44ff_81f2_41dc0757759d
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_39b15709_b078_4d86_a8d2_3dadc2a00480
stoichiometry: 4.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f0313b57_485b_4c35_a664_6f81aac1baff
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 5-(2-Hydroxyethyl)-4-methylthiazole
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#f7225a61_29fd_4423_b1a3_d249a74b25e2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7df08d1e_eb4d_4734_bd4c_808be38435e1
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8d38e270_131c_46f6_ac27_bd63ed036466
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4ee81b29_bb50_49a3_84da_6507e65d0e00
notes: GPR_ASSOCIATION: RSP_0267 GENE_LIST: RSP_0267; SUBSYSTEM: Carotenoid biosynthesis Equation: Spheroidenone + H2O <=> Hydroxyspheroidenone Confidence Level: 3
fast: false
reversible: true
name: hydroxyneurosporene synthase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_956aa634_743b_423f_af23_059bb5007e8b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_077ba929_ccdb_4ad9_9d1f_a38214ef7024
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3c6c3b9a_f740_403a_bcad_c82992ad95f6
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_34500512_c3eb_4b0e_8cc4_fde85f652bee
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_76e648a7_4fd4_44ab_8d49_b5a8dddb6559
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4978a010_a35a_4264_849a_4c8c965e0c72
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#cf5ca099_d3f5_43c1_8fdb_aa0ff4431e05
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2b6b5195_d461_426b_b3a2_d9eb59e398cf
type: Reaction
fast: false
notes: GPR_ASSOCIATION: RSP_3704 GENE_LIST: RSP_3704; SUBSYSTEM: Pentose and glucuronate interconversions Equation: D-arabitol + NAD+ <=> D-Arabinose + NADH + H+ Confidence Level: 4
reversible: true
name: ribitol 2-dehydrogenase

http://identifiers.org/biomodels.db/MODEL1304240000#_44462085_a2e1_4e75_bda1_9f034dcdf8d3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_94426279_3a68_4471_b401_2eef02521410
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_733b9c07_8f64_43dd_bfa1_71c912d93d60
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_74adeb52_2098_461f_b040_d6e2d779fd6d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_740b2bfb_3c61_41eb_b9d1_c2fa80b3813e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_07d4d46a_d085_49e3_9338_77bc564a45be
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e7ac245f_d801_4133_b7ca_dee996492428
stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6126259d_be81_4646_a10f_a07b3115506e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4264e82a_977d_439f_8376_b04741b1f445
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e585cc7d_738d_47a6_bf30_95cfcced7c1a
reversible: true
notes: GPR_ASSOCIATION: RSP_3272 or RSP_1499 GENE_LIST: RSP_3272; RSP_1499; SUBSYSTEM: Glutathione metabolism Equation: Glutathione + H2O <=> Cys-Gly + L-Glutamate Confidence Level: 2
fast: false
type: Reaction
name: Gamma-glutamyltransferase

http://identifiers.org/biomodels.db/MODEL1304240000#f2824331_8e2f_4248_b9a4_ba9bde898fe2
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_25f848f4_88bd_48ec_a8e0_2b71374407bc
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Hexadecanoicacid
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_6db842ee_3a16_4bc2_832c_1bd166fde888
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 1-(5-Phospho-D-ribosyl)-ATP
type: Species

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fast: false
name: acetyl-CoA hydrolase/transferase family protein
type: Reaction
notes: GPR_ASSOCIATION: RSP_0029 GENE_LIST: RSP_0029; SUBSYSTEM: Pyruvate metabolism Equation: Acetyl-CoA + H2O <=> CoA + Acetate + H+ Confidence Level: 2
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#cdcee3cc_8bd9_45e4_8839_2f0aec6637de
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e558a3bc_1541_440f_a196_178147546534
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0d742a93_02d7_4835_8543_57a2171d32a8
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_995fe569_6615_4107_9202_f69f8c5fb063
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8ad0b136_1d5e_4961_a264_2dfae817aaae
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6b94fdb4_7dfd_4686_a8e3_49d70900f6d5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_23be81e4_f184_4eeb_bdca_6bab37b5dd5f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_527f693a_bffb_4fa3_8346_474165bb6eb5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1801ec82_8a35_493a_92bd_088ac59e58b2
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3186bfa5_02a3_491a_b674_c6e7523623fe
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: 5'-Deoxyadenosine[e] <=> 5'-Deoxyadenosine[p] Confidence Level: 2
fast: false
reversible: true
name: 5'-Deoxyadenosine transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_78b3f15b_8751_4562_ad63_353d01f6c212
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_428272a9_1fe7_4d04_b26b_bb87bda72764
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d9629d1e_be16_4af5_b6e0_86a86512be41
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7593fd95_43f1_41e1_82c1_4f7e3ffd2fdf
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_151a5f01_960e_4a94_ad2a_7bc162a684f0
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_79d20643_8da4_4f3f_9995_5059d65f6f36
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e3f0ffae_4bd4_49c7_9e45_792e175472a5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f3e9cf22_51f8_4592_bc0e_8a17a6e3351f
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fd34f524_1d50_4774_a64b_78e6ce206d2a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8eb63d85_53be_4a1c_99cf_0558fa877a09
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_6152be29_e5dd_42f5_be33_fb30a92285d7
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4e998126_90cf_4bc5_887c_fe5f1c34f2ed
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4c7b2259_68e0_4a25_a953_1d9106b2c7f1
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4a89898f_f5d7_46c8_ae28_dbd2561f722d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ad279378_58b8_462b_825f_d86a357dc8d7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_14e7def7_71e4_4878_843d_50b800dbf36d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_996e6b60_387f_4a00_b5ea_f76c100d3d3b
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2d0f65b7_5c58_48c2_8c40_d590dedb8334
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e16a5365_d381_4261_972d_b0a447625c80
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f98e21de_dc2d_41b3_a19b_b27671476ce5
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c31ddeb6_2b31_4311_965d_1e271b419ad0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_70f36883_195b_4386_8042_455545def513
type: Reaction
reversible: false
name: S-adenosylmethionine synthetase
notes: GPR_ASSOCIATION: RSP_3595 GENE_LIST: RSP_3595; SUBSYSTEM: Cysteine and methionine metabolism Equation: ATP + L-Methionine + H2O <=> Orthophosphate + Diphosphate + S-Adenosyl-L-methionine + H+ Confidence Level: 3
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#f81c3ba8_fd4a_4514_8d58_213f190cbe83
stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: N-Acetylphosphinothricin
type: Species

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_56e4bc0d_820d_4bda_9bc2_c974dbd8be3d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2713af90_a2d6_461d_b4dd_a3d53604036c
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_339e9b7b_02ff_4007_b52c_775792b67a6a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_03118948_ae20_4fcd_b9ee_c14455fc2d08
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_379d4ee3_8fcb_4f99_9f70_f75bd543b5e3
value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_952be4ef_51d1_4ead_9fa8_27abfaded534
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8f62adfb_2d56_405d_add5_bcdc170df6ab
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4a291845_804a_4114_8d07_b269e6d65afd
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fdcc2f5b_7466_4f76_8e83_8141fa0f76aa
stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0084f895_e5cc_436e_bff8_17533a548ec5
fast: false
notes: GPR_ASSOCIATION: RSP_0481 GENE_LIST: RSP_0481; SUBSYSTEM: Pentose and glucuronate interconversions Equation: 2-Dehydro-3-deoxy-D-gluconate + NAD+ <=> (4S)-4,6-Dihydroxy-2,5-dioxohexanoate + NADH + H+ Confidence Level: 2
name: 2-deoxy-D-gluconate 3-dehydrogenase
type: Reaction
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#dfc80a1a_9976_4775_bdf6_1d77695b172a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a80c4756_8a99_4ff8_a469_b145aa6340a2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3',4'-Dihydrorhodovibrin
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_18d9285f_966b_4a39_acba_95acec554503
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2,2'-Diketospirilloxanthin
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#ab5a94a6_f4a9_485d_9eff_1ad14be95b85
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2ad890b7_01ff_4843_adbd_7cae62121a37
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1c49c7b0_d892_4b6c_92ff_5b8a97f96109
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3d5029d9_cf3d_46fe_9b2a_a03ca363eef0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_6816ec37_67af_4fb3_9922_d6c31581c730
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Oxopentanoicacid[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#a0818577_b8df_40cc_8c44_15bb69736fc9
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Hydroxy-5-methylhex-4-enoyl-CoA
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#c23fed29_c4eb_4797_8f7c_6bb64a3eea19
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9fb030a7_ee10_4aa9_922b_b58026179439
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c049a6b1_84ad_4633_a4a3_3f1605f4f5ea
notes: GPR_ASSOCIATION: RSP_1461 or RSP_2394 GENE_LIST: RSP_1461; RSP_2394; SUBSYSTEM: Lipopolysaccharide biosynthesis Equation: 3-Deoxy-D-manno-octulosonyl-lipid IV(A) + CMP-3-deoxy-D-manno-octulosonate <=> Di[3-deoxy-D-manno-octulosonyl]-lipid IV(A) + CMP + H+ Confidence Level: 2
name: putative 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)
type: Reaction
reversible: true
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#ef8a5422_7b16_4c43_b63e_31d6b130bedc
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 10-FormyltetrahydrofolylL-glutamate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#bec29401_2e91_4e97_b149_7f46c68d0c74
stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8d85afbc_6dbd_47e4_9259_0673c76e12f1
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2922a1a0_9b7e_474b_b38a_3cc9990cc9f4
fast: false
type: Reaction
name: protochlorophyllide reductase iron-sulfur ATP-binding protein
reversible: true
notes: GPR_ASSOCIATION: RSP_0285 and RSP_0286 and RSP_0288 GENE_LIST: RSP_0285; RSP_0286; RSP_0288; SUBSYSTEM: Porphyrin and chlorophyll metabolism Equation: Protochlorophyllide + ATP + H2O + H+ + Reduced Ferredoxin <=> Chlorophyllide a + ADP + Orthophosphate + Oxidized Ferredoxin Confidence Level: 3

http://identifiers.org/biomodels.db/MODEL1304240000#_9cb751bb_da37_4efa_a84e_3df7bd7b2bdd
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Adenine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#d9888be7_f89e_49e5_878c_e8c74e9ba3d1
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Glyoxylate[e]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 2.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Formaldehyde[e]
type: Species

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_63ebc4cc_154e_4942_9705_25c811f3a0bb
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e4978e50_def6_4836_acea_b69f600ee4ed
stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d16f47ae_9710_4895_9c31_d631f66c1e9f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3a0f8c00_5392_4061_a1d1_fc2b5511cea6
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_339bfeb5_1556_4e5f_abd6_26e5f9f1c123
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5d366d79_2151_47bf_937f_63f43904d4ec
type: Reaction
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Propanoate metabolism Equation: 2-Oxobutanoate + Orthophosphate + 0.5 Oxygen + H+ <=> Propanoyl phosphate + CO2 + H2O Confidence Level: 1
reversible: false
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#a3bdf4cc_a846_49a3_8bbc_36aa31b950c2
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2e9069ef_2459_42c5_b17a_1ad3ead7821e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7eb211f3_3997_466b_816f_6d2278cd78e4
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_36c65c46_abea_4728_86fe_7756a54056c5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7b076c07_6b9a_4acf_8359_b0a08f322120
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b35e87bb_bb57_45d7_9b46_49580d695c8a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b242b973_5488_4a15_9a40_07eb7cedf322
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7d92ea6e_bb28_4245_81ef_fa3067e2adf2
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fd422879_09e9_4f18_a878_6097646e4fd9
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ab391c0f_1782_45b9_b5f1_5b22988f413c
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ba0f6e0e_1ef6_491a_be3b_f1dc686e6ec4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f42da12f_a180_4bbc_b0e1_f2347341cbbe
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2d903768_fc57_41c3_9ed8_5e676094e486
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_21387972_ca6e_4db6_a5f0_8902517ba8e0
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7734f725_3a09_4957_a802_6d6b9e5d287a
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_18dfa036_7a4a_4e08_9f42_2e3a289a4b3f
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Proline[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_1eeed5f4_fdc3_4335_ac84_6b7018c8dd09
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_19105e8c_5c29_42be_afa5_b7f7d6f4bb3d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#db1a4e2b_3a47_469f_b390_566084244f35
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b22befbb_7b3f_4ea6_9d37_b09b14239815
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 4-Hydroxy-2-oxoglutarate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#f50858d8_a836_4e30_baac_7428f44e1428
notes: GPR_ASSOCIATION: RSP_2712 GENE_LIST: RSP_2712; SUBSYSTEM: Fatty acid biosynthesis Equation: trans-tetradec-2-enoyl-[acp] + H2O <=> (R)-3-Hydroxyteradecanoyl-[acp] Confidence Level: 2
fast: false
reversible: true
name: enoyl-ACP dehydratase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_245e6303_f619_4e59_9d42_5b284d7e0260
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_85febe00_5561_490d_bbb0_6286163b88a1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c1ae3952_8bbb_4161_9bfc_410aa22bb0ba
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Octaprenyl-4-hydroxybenzoate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_70977b53_c395_4778_a855_4a552403efb7
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: D-Sorbitol[e] <=> Confidence Level:
fast: false
reversible: false
name: sorbitol exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#e96defda_4696_43b8_8c77_bb5df9cc2b44
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3c874c9a_4f89_4855_ae03_3e5b01f1162a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#cb933c25_2abc_4176_b69c_954e80e04ccb
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d42a5ce3_a73c_46bf_b712_f240d414c24b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f76f2272_1b18_4449_9e60_1bc6449a2904
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1d81eac0_65cb_44e9_a755_649b0f5c4d71
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_52c4f665_5abf_4e6c_9dd0_39074ab79f46
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Chitobiose[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b0dbe16c_0c82_4e3d_83a3_6363c15a85d7
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_60a93a22_7e60_4b43_8b01_da4d311d39ed
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2215c496_678d_448e_b1a1_ff464752b351
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: L-Alanine[e] <=> Confidence Level:
fast: false
reversible: false
name: L-Alanine exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_27c79b37_af52_4850_b6d5_e53f0fe21b50
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_11797fd8_8aa0_4b66_a827_dac93e02c975
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6f5f8386_dc0b_4d6b_803a_73168a75359b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6f4cd793_2250_4723_a16b_d14d91cc1958
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_34da9a20_45e4_4e82_8180_1f1e019baf48
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_22133eee_78f5_4808_931b_65503d8b7f8d
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3,4-Dihydroxy-2-butanone4-phosphate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#fb86e860_7fbf_427e_9d68_6e1007611807
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_70ffdfa2_4e4d_4c72_9291_6fba264e8a44
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Thymidine[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_724189a1_fa0c_44de_9203_ce0724040b16
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_83eff42e_5259_4fe1_9a2d_fadb11233d14
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ddb856a0_f56e_4a1b_be32_3c291516c885
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ecc792cf_7e94_4cfd_9de0_348224f7646c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9d5820cc_d0d5_4a70_83ac_e0c06cdf4fa6
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_35609472_01bc_4870_b8e4_6b0a58c1a4db
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b1fcc4ef_bdca_47a4_bc31_32d1f4d20753
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7262467d_e186_4ce3_b3a6_c9d2021d9c67
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2fbf5f8e_a99d_42e4_82f6_4cff93b51180
type: Reaction
name: putative sarcosine oxidase
reversible: false
notes: GPR_ASSOCIATION: (RSP_2689 and RSP_2688 and RSP_2690 and RSP_2686) or (RSP_2689 and RSP_2688 and RSP_2690 and RSP_0638) GENE_LIST: RSP_2689; RSP_2688; RSP_2690; RSP_2686; RSP_2689; RSP_2688; RSP_2690; RSP_0638; SUBSYSTEM: Glycine, serine and threonine metabolism Equation: Sarcosine + H2O + Oxygen <=> Glycine + Formaldehyde + H2O2 Confidence Level: 2
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_068a94b4_74fd_45e6_8295_360da1de4d5b
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Oxodecanoyl-[acp]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_23bcda1a_4e10_4e0d_9b54_9660e7f970a0
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8b56ef27_807a_4f6c_b5b9_f30465adb7e0
stoichiometry: 0.459726340415114
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8dc421de_46e9_4ecb_8846_5c49902facb4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5256cf6c_018c_4bb7_b1b5_7296dfcafe79
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#df22f453_c4ba_487c_8756_5279460e1742
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_723bc7c9_cff0_43d1_9fa7_ee32ccfde2e6
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#decf8d8e_4534_42dd_929b_05bff437d18e
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2ba63aec_63f6_4429_a22d_c3b5073c1175
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6c022088_ce28_4ab5_8de5_ffb422884066
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_796fedd5_388f_497f_81ea_70ef93c223c4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d20c53e2_9646_4c12_908e_f76c071bf3a3
fast: false
type: Reaction
name: cytidine deaminase
reversible: false
notes: GPR_ASSOCIATION: RSP_1594 or RSP_2267 GENE_LIST: RSP_1594; RSP_2267; SUBSYSTEM: Pyrimidine metabolism Equation: Deoxycytidine + H2O + H+ <=> Deoxyuridine + NH3 Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#_2a8d7758_2acb_4ac1_ba77_398fa482f374
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Ethanolamine phosphate[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#a198e4ce_fcc3_4295_bb24_ccaedf5845d9
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Alanine[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b3a39dc0_5dce_4671_b83e_f9864ba39778
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f319b499_23f5_4bb0_b42b_479067d93521
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_556682e0_6277_4d03_bf68_7b99e9613e55
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2f5c518e_7555_427f_835d_ab9f00bedc16
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 5-Aminolevulinate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#bed35156_fba9_4a16_bbfd_90499203b533
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Succinate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_02ebdc44_0c4a_4278_862b_6592a58be96c
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_41e9bcd0_d690_4c1d_8d8a_b58c315c281d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_71991cd3_8284_42bf_804b_23105e7b24c4
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8212d51c_4908_49d1_9f6d_47673a9bad90
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: β-Hydroxy Butyric Acid[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_4ff9369c_6c79_4bc2_a859_8e8cbf76e50e
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c1d015c7_4ce2_45c5_928e_21b4cb688df9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_35aad6c4_4c64_475b_899a_8a1a36a5de9d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0ed7c456_025a_4137_8517_01fa9c70c0be
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9e4fb4b8_2c0d_40fb_885e_884e668fa2f0
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Decanoyl-[acp]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_41b3d969_c996_4110_becb_01d45674d093
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_540fb747_ae03_48cd_ae31_ded04c729aff
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_079b7eaf_862b_4cca_bc0f_06e265f0d4fc
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4f1f031a_0b61_424a_82b7_02fe753ae766
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a8646abb_829a_44ff_ab57_94606149a46c
type: Reaction
name: RelA/SpoT family protein
notes: GPR_ASSOCIATION: RSP_1670 GENE_LIST: RSP_1670; SUBSYSTEM: Purine metabolism Equation: Guanosine 3',5'-bis(diphosphate) + H2O <=> GDP + Diphosphate Confidence Level: 2
reversible: false
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_3c28e7dc_9ba0_44dc_850d_56cd47f0f6fe
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f8084ef3_d46b_472c_baf9_d33ef48968e4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_51aace38_0959_4469_9f18_3eec358cb57d
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Phenylacetyl-CoA
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#a08991b6_3d2e_455d_9def_e472b6dddc2e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a8862869_f3b5_4ce0_85f8_94240c9ea388
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_974d04e4_55f9_40d5_8558_927aae0eab62
notes: GPR_ASSOCIATION: RSP_3074 or RSP_0176 GENE_LIST: RSP_3074; RSP_0176; SUBSYSTEM: Valine, leucine and isoleucine biosynthesis Equation: 2,3-Dihydroxy-3-methylbutanoate <=> 3-Methyl-2-oxobutanoic acid + H2O Confidence Level: 2
fast: false
reversible: false
name: dihydroxy-acid dehydratase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#d769b930_1646_4561_808d_dbfbeea04945
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Magnesium[e] <=> Confidence Level:
fast: false
reversible: false
name: Magnesium exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_27301090_df6a_42cb_9590_97e874fe45cb
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_31bdee35_85bc_4a10_9141_3831e0dd72bb
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#dd8d7955_697b_4dee_a826_9b7d58117965
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_29ca4fc7_e050_47e3_9ba2_6bdd6f5e98da
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_438ba49b_187a_4e25_8ff2_b36f411bb474
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#db4405b9_3cdb_4778_8bb2_95c02b3a5508
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8e48e242_f78e_4f82_8f4b_37de46db2714
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_44fd2f61_ac87_4d8c_a6e1_499a4819ecfc
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9e14c4eb_0009_45bf_8335_28bce1a14b6f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a635fce5_a325_4fc6_b9ed_2c7d0f79f68e
type: Reaction
notes: GPR_ASSOCIATION: RSP_0155 GENE_LIST: RSP_0155; SUBSYSTEM: Valine, leucine and isoleucine biosynthesis Equation: (S)-3-Hydroxyisobutyryl-CoA + H2O <=> CoA + (S)-3-Hydroxyisobutyrate + 2 H+ Confidence Level: 1
reversible: false
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_4314bb6a_881c_45c5_ad4c_2419658ec46e
notes: GPR_ASSOCIATION: RSP_3739 GENE_LIST: RSP_3739; SUBSYSTEM: Pentose phosphate pathway Equation: 2-Deoxy-D-ribose 5-phosphate <=> D-Glyceraldehyde 3-phosphate + Acetaldehyde Confidence Level: 2
fast: false
reversible: true
name: deoxyribose phosphate aldolase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#a6e5d075_6f27_41cb_89b7_bf032d54e107
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5c9dfb6f_1419_4268_9a42_b1dd4a59ec1a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8ebbda2a_f4ab_4c09_8827_ba964bf6801f
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3'-AMP[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_93a74a16_a64d_498b_b3b7_e86e24819543
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ac637ab9_34f6_49e0_ae8c_1e284088adbd
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_72d56120_42dc_42d7_8d07_f7a2dd33232c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a7b32a4b_ba06_4770_8f1f_146f9549b78f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d8348ada_2479_492d_923c_bc05cdaeef7e
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Dehydro-3-deoxy-D-galactonate6-phosphate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#dca52dc6_cede_4916_8f0f_9dc3efe57eb1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_50487709_5188_4dd1_8961_6ceb9c2b2de5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e1378af6_75b2_448a_9485_2dfdc9aa1f3c
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Acetoacetate[e] <=> Acetoacetate[p] Confidence Level: 1
fast: false
reversible: true
name: Acetoacetate transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#d6aec0a8_4a60_4717_a360_765fadb4fda0
notes: GPR_ASSOCIATION: RSP_0529 GENE_LIST: RSP_0529; SUBSYSTEM: Pyruvate metabolism Equation: Acetyl-CoA + H2O + 2-Oxoglutarate <=> (R)-2-Hydroxybutane-1,2,4-tricarboxylate + CoA + H+ Confidence Level: 2
name: acetyl-CoA:2-oxoglutarate C-acetyltransferase
fast: false
reversible: false
type: Reaction

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b555429c_5984_4f68_8d06_58d1623505cb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_332b7019_e570_4ec1_a839_310adacb3b59
value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0381eb3f_2cf6_444f_a63d_ff170886f1ab
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d5c7b55d_d0d5_4814_ae5f_925a75c92e8f
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6d338eae_9e66_45ea_a462_794dad3d214e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3fa868f1_f8bd_4c9a_bd45_b9f615ee9206
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fb0c1520_3dde_4034_99ae_40fec50ad111
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6bbc637a_b793_4489_8043_26771cebba79
stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: CDP-diacylglycerol
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_6f03b592_f144_4daf_add3_641ab9a51e67
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1e0504e3_bba6_45d7_9faa_fb03096f08fa
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_92f82682_b2cc_40e2_b047_a628cb36a55a
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#afd698f6_9a6d_4fd1_a183_995a769cce35
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ccee6392_2551_494a_b014_a8975e13d979
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0a76621a_9ae6_4afa_bb3c_41bb4fb1af8d
stoichiometry: 1.0
type: SpeciesReference

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reversible: true
name: glyceraldehyde-3-phosphate dehydrogenase
type: Reaction
notes: GPR_ASSOCIATION: RSP_2959 or RSP_4211 or RSP_3269 GENE_LIST: RSP_2959; RSP_4211; RSP_3269; SUBSYSTEM: Glycolysis / Gluconeogenesis Equation: D-Glyceraldehyde 3-phosphate + Orthophosphate + NAD+ <=> 3-Phospho-D-glyceroyl phosphate + NADH + H+ Confidence Level: 2
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_52697381_718a_47a8_90cb_be23c36173af
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a5a7f945_b8c0_4f4d_9181_a475f133c46f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4e983f0d_850b_47cf_a4fa_6f44ce07392b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#edc1d199_8ec1_4751_bb55_54b614c68b01
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_73a45ccf_ae45_4909_9d95_ad6b7e70cdf5
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b392660e_b916_49d6_9e6d_8da406f252ad
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e7f02bb6_4062_4d0a_91be_6e67a1d55946
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8a1fbaf2_0996_4254_8924_18aaf486798c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fc63a679_7b76_42de_8584_f394317c4d97
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e051dea7_d500_4e54_975e_595c0138b0cf
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_70d74945_4a0f_4d24_8e97_c2c6b69f7363
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c803f1e8_3bff_4119_a568_f6e6cf5fd8ab
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b24a1152_c6d3_428b_bade_6428c496f15b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bc688dee_868d_459b_bb78_2c9cc60fe85f
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#abccd543_861b_4a85_b683_e450c9bbca7e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7d16c6c9_a957_4709_9068_b19479cf3f13
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_72308efc_03d6_4c10_9065_2eda7bc56833
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0744cbf8_fd73_419e_99ef_ff6719197ac1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_89584893_4b2c_4d48_bf50_75a0abf57260
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d24a129c_c1cf_465d_a25c_5257524b61cf
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_75433742_e75a_448d_a225_9ee1d224a03c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4300e31a_0108_4f27_81a1_80c17d163bd2
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_89bf6e3c_f7f4_45ef_8e89_a2e37b213cfe
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b131d5e5_cba8_47df_b4f1_d74d466504a7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Thymidine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_1f88a09c_c8a0_4496_97a4_8b822300bb1d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7efbbc3b_a210_4ed5_aca6_e67d5843bd5d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_61fcd3a1_a802_4e13_8cf8_84c93eb7811f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d0cdc014_4d3b_410c_9a0a_9225fa3789a7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3b3ff9f4_7b46_40e9_b52a_e7b715f47084
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 1-Acyl-sn-glycerol3-phosphate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#cbc85d2a_9504_44d3_a081_47667bec5a26
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2b0129fe_d125_4423_862e_22448ab6815c
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3508de1a_f237_4685_917a_77871c430fdb
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2e6346e4_6643_48f1_a043_de5c4b18a110
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c78fccba_e6d0_4dfc_8d65_8cfbb689664c
notes: GPR_ASSOCIATION: RSP_0863 and RSP_0862 GENE_LIST: RSP_0863; RSP_0862; SUBSYSTEM: Valine, leucine and isoleucine biosynthesis Equation: (2R,3S)-3-Isopropylmalate <=> 2-Isopropylmaleate + H2O Confidence Level: 2
fast: false
reversible: true
name: isopropylmalate isomerase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_3402f5b8_caee_40cb_97b4_07c4e3430a4e
reversible: false
name: ABC putrescine transporter
type: Reaction
fast: false
notes: GPR_ASSOCIATION: (RSP_2397 and RSP_2398 and RSP_2399 and RSP_2400) or (RSP_3337 and RSP_3335 and RSP_3336 and RSP_3338) or (RSP_0016 and RSP_0017 and RSP_0015 and RSP_0161) or (RSP_2158 and RSP_2156 and RSP_2157 and RSP_2159) or (RSP_3038 and RSP_3039 and RSP_3040 and RSP_3041) GENE_LIST: RSP_2397; RSP_2398; RSP_2399; RSP_2400; RSP_3337; RSP_3335; RSP_3336; RSP_3338; RSP_0016; RSP_0017; RSP_0015; RSP_0161; RSP_2158; RSP_2156; RSP_2157; RSP_2159; RSP_3038; RSP_3039; RSP_3040; RSP_3041; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + putrescine[p] <=> ADP + H+ + Orthophosphate + putrescine Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#_595a619a_9acb_435b_b086_c8cf7b588b3b
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c5ca2d92_dc7d_4048_9c27_563118818166
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_088785ad_1125_4737_b90e_87cc99c1c4f1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3478653c_3865_4ec7_aaf1_2e48bab88eef
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e703cefe_4097_451b_946c_629374425ba3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fad56d3a_51c1_4338_a89c_2a577649a7c0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_957d5f22_41bf_4a7e_9897_37e8fc973f5e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2fef1f3b_cfb3_4ec6_b053_13e3a494f713
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#af783f30_0aed_4fb3_8661_0e1a8971f159
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bee1d941_d05a_4d97_860b_723f63584fc3
type: Reaction
name: phosphotransacetylase
fast: false
reversible: true
notes: GPR_ASSOCIATION: RSP_4009 or RSP_1255 GENE_LIST: RSP_4009; RSP_1255; SUBSYSTEM: Propanoate metabolism Equation: Propanoyl-CoA + Orthophosphate <=> Propanoyl phosphate + CoA Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#_7f55f193_6789_4afa_b6ec_80682b643e21
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#dd7ee45f_ed60_4796_a065_a2c86be8db28
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7cd82abb_c788_4f3b_a3db_0dfaa20918fa
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c1f170db_6594_4812_8e2c_be8e4ae014d3
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f8ecff62_0488_41af_99da_bd723d3ea2a0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9797907f_207f_4d9b_97d9_e3d502101a32
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1b7fbb02_0331_450d_98a7_e2e030c6da38
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Acetaldehyde[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b527c05f_7b9a_458c_8b88_838e1c141ce3
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_05307867_e7cf_4d85_810b_815193fd29a4
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bd1fd205_9e54_4872_960c_42cbc7130610
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a93e88eb_808b_4b7a_af4d_75e9d33d2073
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-C-Methyl-D-erythritol2,4-cyclodiphosphate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_4c76c719_87d1_4474_a25d_bd58ed454215
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: C5-Branched dibasic acid metabolism Equation: (S)-2-Methylmalate <=> Acetate + Pyruvate Confidence Level: 1
fast: false
reversible: true
name: (2S)-2-hydroxy-2-methylbutanedioate pyruvate-lyase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_5e462521_786a_4930_8415_de90fd9853eb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_700d8a33_56a5_4694_8809_28747eff173c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c4aa2592_e9ec_4a69_8a15_e01033ec6279
fast: false
notes: GPR_ASSOCIATION: RSP_0430 GENE_LIST: RSP_0430; SUBSYSTEM: Porphyrin and chlorophyll metabolism Equation: Adenosyl cobyrinate hexaamide + D-1-Aminopropan-2-ol O-phosphate + ATP <=> Adenosyl cobinamide phosphate + ADP + Orthophosphate + H+ Confidence Level: 3
reversible: true
type: Reaction
name: adenosylcobinamide-phosphate synthase

http://identifiers.org/biomodels.db/MODEL1304240000#_44956150_6910_4417_92ec_ab778b618567
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bedb0a75_5145_4d92_b2fe_1672e94c2f21
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_08c7f8a6_b286_4fe2_95c2_cbbdfa2807cd
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e800dec4_76b2_4dcb_8baa_3ee23c9a5225
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f718dd45_ac9a_4beb_bc5c_f49a99214671
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7b347c8e_43e5_4c0b_94f3_f257af2b673c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_79c7315e_7499_4050_8780_66f0b899415f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_57e70ff6_1d51_4be2_969e_4a06644465c8
name: stationary phase survival protein SurE
notes: GPR_ASSOCIATION: RSP_2545 GENE_LIST: RSP_2545; SUBSYSTEM: Purine metabolism Equation: 3'-GMP + H2O <=> Guanosine + Orthophosphate Confidence Level: 2
reversible: false
fast: false
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#ecd81970_c1e6_41d7_be9f_aa70b1c51881
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: GMP[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_48a3c7a3_fbe7_4964_831b_241b2bdb94b1
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9ca4fe9c_b46c_4294_b592_89b9eaf44ac7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Phospho-D-glycerate[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#db4c8b57_d979_4479_9d43_287924c178f7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#db640212_78c6_44bc_9dbf_764e97577e1c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a50199d6_0d76_45db_8ee7_75a2db5c7cf7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1806f2df_369a_4ecc_9ccf_044b3d0c430f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7dc098ff_a880_44a1_b4c0_fbf4b82333ae
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b9ffdaaf_f036_4a7d_bf81_8570b4658e1f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_12878d77_8f24_4296_ae89_a84a4a7e31ce
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Ethanolamine phosphate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_0724b703_f9e9_41cd_95fe_ac56667c4426
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f30b2397_5c6b_484d_95db_d251ac823db2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f42e9606_f668_4098_94d1_a07490a60c8c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c5c253eb_5a53_4806_9afb_747efa5d3fe5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fb77ac8c_b9f1_4c0b_889a_4b9c424f9452
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6925967b_d0fb_42e0_a1f9_925287caf9d6
name: Agmatine transport via proton symport
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: Agmatine[p] + H+[p] <=> Agmatine + H+ Confidence Level: 1
fast: false
reversible: true
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_2cde85f1_3caa_4078_9d71_1bb1f58a7aeb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e4be644e_30c1_4dc1_99ab_843c6f70a795
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1e8a9612_26fa_4b74_8132_448de0d30430
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8b567349_c041_41b6_8a15_e99cc8901add
name: enoyl-CoA hydratase
type: Reaction
fast: false
notes: GPR_ASSOCIATION: RSP_2196 GENE_LIST: RSP_2196; SUBSYSTEM: Fatty acid metabolism Equation: (2S,3S)-3-Hydroxy-2-methylbutanoyl-CoA <=> 2-Methylbut-2-enoyl-CoA + H2O + H+ Confidence Level: 2
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#_8ccedb3c_6a3f_44cf_a4f6_20ec8e051787
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_75d62e47_3716_4a3b_8c51_292597e67e5f
constant: true
size: NaN
spatial dimensions: 3.0
name: Cytosol
type: Compartment

http://identifiers.org/biomodels.db/MODEL1304240000#a7c862c3_38ba_435b_82fa_c45d6ef9caf2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#cba7c9ed_3794_408d_8cd5_416bfee60f0b
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_265850d3_ca52_43d6_aa25_0745cfcbc365
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a192bf27_5b35_4b26_a233_8f5db0be7ccf
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ae0c7977_0910_4c6e_87a3_104904acf5bc
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fadc91cc_75ad_48e6_a174_96c4ea1864e0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d4fdb560_3726_41fd_a054_55ed32e25e28
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_73b10838_46a3_4254_8db2_77d67c4ac8ea
notes: GPR_ASSOCIATION: RSP_3536 GENE_LIST: RSP_3536; SUBSYSTEM: Fatty acid metabolism Equation: 3-Methylcrotonyl-CoA + Acetyl-CoA <=> 5-Methyl-3-oxo-4-hexenoyl-CoA + CoA Confidence Level: 2
name: thiolase
reversible: true
type: Reaction
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_93425080_72a4_4d6e_b329_4573564558b4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a4c0a139_6612_4f5c_b30b_9128ab1428c7
reversible: false
type: Reaction
name: dihydrofolate reductase
fast: false
notes: GPR_ASSOCIATION: RSP_0389 GENE_LIST: RSP_0389; SUBSYSTEM: Folate biosynthesis Equation: Folate + 2 NADPH + 2 H+ <=> Tetrahydrofolate + 2 NADP+ Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#c5b322d4_895d_400c_8fde_62cbff4f1cc9
stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Arginine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_046f9f01_a52a_41f1_9690_41e707548ab7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_762252f5_c437_4f92_a206_d6af8f6e0feb
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: D-Galactonolactone[e] <=> D-Galactonolactone[p] Confidence Level: 1
fast: false
reversible: true
name: D-Galactonolactone transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#aeede4c7_f5fc_4a25_96ec_2f368a807e93
type: Reaction
notes: GPR_ASSOCIATION: RSP_1862 GENE_LIST: RSP_1862; SUBSYSTEM: Folate biosynthesis Equation: 2-Amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + 4-Aminobenzoate <=> Dihydropteroate + H2O Confidence Level: 2
name: dihydropteroate synthase
reversible: true
fast: false

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_06e9aeb7_9349_4d86_94c8_72e75588d1c7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_76556504_4ad1_4aef_8281_90dae5c6c784
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (R)-3-Hydroxybutanoate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_9c79561a_00e1_41e4_b76e_fff953bfc28a
stoichiometry: 1.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_172f678b_811f_40af_9523_11a3b30b3389
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7d1d52ce_d93a_47dc_b487_ab8983e07daf
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3523ba8f_ea45_4945_8d4c_fdcb5f12d35e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_26b714f9_0341_41d7_8cd5_269b17953e59
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ae5ada61_61f0_415f_8110_6da244094aca
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Methylmaleate
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Sucrose[e]
type: Species

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notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: D-lactamide[e] <=> Confidence Level:
fast: false
reversible: false
name: D-lactamide exchange
type: Reaction

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_114e920c_48b8_45ee_a1de_f3ce453e79db
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4c17fc93_c027_4783_904c_bd0f08446ef1
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bee87eeb_86d0_4cdc_8d65_476c4ae3181b
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_94bcc35e_20fb_4850_a976_63c5d8bc8a49
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_55433c0e_b02a_4e80_8bf2_64a35b5be2f0
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c2feb8d7_c665_4650_ade8_48ba01983c38
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6cd17886_c9a2_41d5_84d6_62bca642d330
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: L-cysteine[e] <=> L-cysteine[p] Confidence Level: 2
fast: false
reversible: true
name: cysteine transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_1e4920f2_2226_4cb6_994c_630c7a020663
notes: GPR_ASSOCIATION: RSP_2959 GENE_LIST: RSP_2959; SUBSYSTEM: Vitamin B6 metabolism Equation: D-Erythrose 4-phosphate + NAD+ + H2O <=> 4-Phospho-D-erythronate + NADH + 2 H+ Confidence Level: 1
fast: false
name: glyceraldehyde-3-phosphate dehydrogenase
type: Reaction
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#ce37f29e_ef8d_4575_b06a_02e6f06a0b6a
value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Glutamyl5-phosphate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#be071c67_e668_40c8_8e1c_447e54c2c973
fast: false
reversible: true
name: D-Glucosamine 6-phosphate transport via proton symport
type: Reaction
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: D-Glucosamine 6-phosphate[p] + H+[p] <=> D-Glucosamine 6-phosphate + H+ Confidence Level: 1

http://identifiers.org/biomodels.db/MODEL1304240000#_298351f0_8ef4_4b61_b843_8e95a5d79886
stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_470e28b9_0040_4923_afe4_941811741654
value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_340d7947_fd60_4f81_a8eb_bcec73a8c7b3
value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a65840f6_ab57_4f6a_8c49_a2a7a1e68c30
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Isopropylmaleate
type: Species

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b3c5fb42_c962_4a9b_99eb_ddeca4dacead
notes: GPR_ASSOCIATION: RSP_2941 GENE_LIST: RSP_2941; SUBSYSTEM: Amino sugar and nucleotide sugar metabolism Equation: Chitobiose + H2O <=> 2 N-Acetyl-D-glucosamine Confidence Level: 2
fast: false
reversible: true
name: putative glycoside hydrolase
type: Reaction

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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fast: false
notes: GPR_ASSOCIATION: RSP_2181 and RSP_2180 and RSP_2179 GENE_LIST: RSP_2181; RSP_2180; RSP_2179; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + choline[p] <=> ADP + H+ + Orthophosphate + choline Confidence Level: 3
name: ABC choline transporter
type: Reaction
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#fa7bdf67_1e0d_4053_bb31_d5197f167733
value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: spermidine[e]
type: Species

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Demethylmenaquinone
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 2.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Dethiobiotin[p]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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type: SpeciesReference

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value: 0.0
type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: N-Acetyl-L-glutamate5-semialdehyde
type: Species

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type: LocalParameter

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value: 0.0
type: LocalParameter

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type: LocalParameter

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type: SpeciesReference

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type: LocalParameter

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stoichiometry: 0.203795439131989
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type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (S)-3-Methyl-2-oxopentanoicacid
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Glycine[e] <=> Glycine[p] Confidence Level: 2
fast: false
reversible: true
name: L-Glycine transport via diffusion
type: Reaction

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type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_733b5f8e_bf56_4ae8_a27c_a64bb6747e76
value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6625c020_9afd_4e0d_9565_35826731195b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_82fddde2_eca5_4fd9_9b19_309641c88a4d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e6b219b1_47fe_492f_93a2_d390fce5aa17
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_073ade14_0d3f_4c0d_8d01_8ec5f102562b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5561e188_d2a0_4b45_8f96_84791d9195b1
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d9ce746c_4db7_4ee3_8fb2_76b6fb426405
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_12ecbb0b_6b3f_46a6_b6a1_291215038c9b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#cc412bb2_e68d_46f0_bc36_3f131d793f81
type: Reaction
reversible: true
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: 2',3'-Cyclic UMP[p] + H+[p] <=> 2',3'-Cyclic UMP + H+ Confidence Level: 1
name: 2',3'-Cyclic UMP via proton symport
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_5769ee85_8d36_4d95_9335_c7d6bdb048e5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9be7ac21_21e7_48f1_8971_a247983b2193
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ebae7e21_c77c_4538_b004_cd0bde93babe
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Hydroxy-3-oxopropanoate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_690565fe_d0e5_4dfc_8310_73f957c3a820
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c1ac9a0e_a6e5_4d6e_9640_4a2fbb78d056
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_28662001_916a_452b_82bb_79fcc3a7fcf3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9fd977f1_a776_422f_a392_1f75f4506ea0
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_35eac42a_4022_4357_9fa0_85f7810da229
reversible: true
type: Reaction
name: branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase
notes: GPR_ASSOCIATION: RSP_1768 or RSP_3455 GENE_LIST: RSP_1768; RSP_3455; SUBSYSTEM: D-Alanine, D-Glutamine and D-glutamate metabolism Equation: D-Alanine + 2-Oxoglutarate <=> Pyruvate + D-Glutamate Confidence Level: 2
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_7af7a81a_dc1c_4b87_b286_00ae204138e4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b62d54e4_1b97_4eb4_907b_ce3323a4961a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#db7c5a90_6de7_4957_b114_9c3bdc673d15
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_03a5a31b_872a_4630_939e_36369c510d38
notes: GPR_ASSOCIATION: RSP_2864 GENE_LIST: RSP_2864; SUBSYSTEM: Pentose phosphate pathway Equation: D-Ribulose 5-phosphate <=> D-Xylulose 5-phosphate Confidence Level: 2
fast: false
reversible: true
name: ribulose-5-phosphate 3-epimerase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_9e3657d0_10bc_4563_934a_cc99c0bbaa57
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_283ed0e2_79d0_4c81_a922_cb25a6ded47e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f59f5edf_4f7d_4a39_8901_28e5c9a2d924
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4d17311e_3260_4d3f_87a6_57b80618da16
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f21e462c_5376_4302_bffd_47c3dc6c01aa
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_74b5c332_717e_4b3e_9072_8860cc5bc31f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_179a35f0_d9b1_42f2_b49c_73fe2fdb6b5c
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_10da4d85_16a1_4b53_977e_4e11f5ced161
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_97e8ed32_8c11_4ab8_b952_e14075688503
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_08db6648_db02_444e_9593_0c2ab85dc1d1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_85bef414_91bb_451f_9848_27e9b28fb422
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3ffe8028_ccc0_47b9_ac22_c304abb507c1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a96bacaf_64e5_425e_8618_eac2997306b6
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#cf2e22e1_1727_4a1c_b05a_53f34d4bcda7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e7c5c15a_354f_44d9_8136_9c309918f9c9
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4de104f9_a3bf_40ad_8be7_5f4cb2c45ad9
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Proline[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_064db375_13eb_48e7_9f35_534050280507
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_58c2da36_966d_47d6_8c10_73dc71645d7e
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 5-Aminopentanoate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_6574afa8_d115_4118_8a27_b1bdcb7d4ce3
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_709387ba_3c83_483a_943a_e6893299da10
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6b2ba995_a88a_4b70_89da_9ec84b0c2642
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_151bf579_7340_4ae2_86f3_8cb75a696d58
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b762563b_80f3_480c_9b44_de5b0c53236d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7c335baa_d4ad_4e25_80ab_83dcfcc12c27
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Ala-Gln[e] <=> Confidence Level:
fast: false
reversible: false
name: Ala-Gln exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_7771e83a_f6a8_4bef_8f5d_546fa315ffb5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Sulfopyruvate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_163b9fc2_6b3e_4ed7_a511_efc25bd96f65
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Cu+
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#ba110915_b537_4832_97d2_46b99b1d2d96
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a734414a_682d_436a_b3b4_71252ee31c8f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c35b513b_8887_4b42_b2c8_c84b518ae31f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c678f460_bd90_4548_9497_48b9355c452d
notes: GPR_ASSOCIATION: RSP_0154 or RSP_3171 or RSP_2846 or RSP_2196 GENE_LIST: RSP_0154; RSP_3171; RSP_2846; RSP_2196; SUBSYSTEM: Glyoxylate and dicarboxylate metabolism Equation: D-Glycerate + NAD+ <=> 2-Hydroxy-3-oxopropanoate + NADH + H+ Confidence Level: 2
fast: false
reversible: true
type: Reaction
name: (R)-Glycerate:NAD+ oxidoreductase

http://identifiers.org/biomodels.db/MODEL1304240000#_77150462_4032_4d04_8473_4ab5b91478a6
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_70e4a86d_74c3_4cd2_8f18_51e883c90f3c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (9Z)-Hexadecenoicacid
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_03eaffd8_a4f0_4e96_a2cf_a2c8e2897366
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: di-trans,poly-cis-Undecaprenylphosphate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b13ad3e4_bbc1_44ec_9b38_e9a33444dbee
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_27550c15_868d_434c_8b7a_1955799bcfdb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#dcc5cd32_db29_40a6_a33a_728a741fb4e2
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4fad6ad4_bfb0_45e9_b81f_404ec0725d25
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: trans,trans-Farnesyldiphosphate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_57135b77_0f98_4586_9d0b_eecb58cb82ed
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_985d60fa_4521_4fab_a7c8_f28575e1724f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3488d05c_c82e_4abb_89db_2529e436e8b5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_832ae0fb_9c99_409f_b5ec_30b5956429d2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a37b0df4_17b2_4fb3_833e_dadd5f0d0d6e
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: H2O[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#e762bec9_6b55_4989_8976_bd6321f72280
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bfe38dc6_f40a_4814_b332_64a38fc23721
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#f85c5997_8649_48c0_a041_00757039e107
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_296d54f7_346b_4338_bab9_f40da58d425b
reversible: true
fast: false
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: 3'-GMP[p] + H+[p] <=> 3'-GMP + H+ Confidence Level: 1
type: Reaction
name: 3'-GMP transport via proton symport

http://identifiers.org/biomodels.db/MODEL1304240000#a4d6307f_4ed1_47b1_9e58_dc0ab754433f
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_012cfb50_ea12_4a92_9381_f955945b740a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1fbc53bb_515d_4016_ad6f_45861fdc816f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#feaf1d30_54c1_4e4a_bc20_c011d6d28721
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#af68b4bc_84aa_46ba_8f83_1852150a4b9b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bfb9ed52_1de4_45f0_983f_8a6ac658e405
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Hydrogen[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_1d86bfec_c48b_4ebf_99c5_868669aff1b4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#dedb8476_b8e5_4957_b7f3_d3561e43e224
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_82aa24bb_f31c_4953_93dc_4aab14506d13
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d8c7ba80_d73d_4bdd_b7c1_8630495cde7b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7cbe0742_258c_4767_8482_e050e4f413ae
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c28dfc99_b58f_457e_b3d6_8ebda2c5172c
name: methionine synthase I
notes: GPR_ASSOCIATION: RSP_2124 or RSP_3346 or RSP_3347 or RSP_2768 GENE_LIST: RSP_2124; RSP_3346; RSP_3347; RSP_2768; SUBSYSTEM: Cysteine and methionine metabolism Equation: 5-Methyltetrahydrofolate + L-Homocysteine <=> Tetrahydrofolate + L-Methionine + H+ Confidence Level: 2
type: Reaction
reversible: true
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_3b1b130b_0f1e_4938_a043_1d1aa9b27ea3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_62cdb24b_83b9_47d7_a070_ea1f2b995cd1
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_59ad9c2f_5b20_4394_942c_5fde965d6db0
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Citramalyl-CoA
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_38a141a5_fefe_4df9_815d_dd0c5c7664b1
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ba8309ae_d4c0_42be_9be5_a36b24b806da
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5930aacd_584d_4b7c_aca8_320e53ab04e1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9739211d_fe61_4716_a3bc_db5ae86c8238
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: 5-Dehydro-D-gluconate[e] <=> 5-Dehydro-D-gluconate[p] Confidence Level: 1
fast: false
reversible: true
name: 5-Dehydro-D-gluconate transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_437763b1_9db2_411c_9ca1_83238ba9d8e0
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_47860f11_8b76_42b7_a7a8_b05bce82e176
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_55f4890c_6672_4226_a79e_a4719c8f5c87
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c2961517_cd37_4bf3_83b0_52518fff255d
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_21690aab_03f2_4d5d_a009_c83a8c1a1c40
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6b69d9f0_a52d_428b_8b42_9eef25f2509a
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ee18dce5_3173_43f2_aede_64214c80b2ef
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_14badcb2_4431_4221_b9ae_7b5424b291f7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_72d434ce_e975_4472_8177_947eadabcc4e
stoichiometry: 3.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0f1fde71_099a_4564_a870_8cbb5f370833
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_257cf910_17bc_493a_83b5_58dfc5f63b54
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#aff19a91_7246_4fbd_9ee0_8ce969213075
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Hexadecanoyl-[acp]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#e3e00951_5db6_4590_aa04_552a567fbb0b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_03283a8c_b3c6_4595_b62d_8d89d1e2fde1
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_150248ca_9bec_447b_a970_758708950e68
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Thiamindiphosphate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_4a3facf6_ee7f_4a76_824a_a47e4c0ce21c
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_178cad0f_1264_4af1_8377_4edde4b62fc1
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_79b85616_91f8_4a90_958e_89c54225707b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3fb810cc_805e_46fd_a0a3_6e4347346eaa
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a37050bb_7b84_4b4d_aa2d_060a2654354a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_519a681d_d3bc_4856_8312_9e4db0e366c0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9fed7bca_bb41_46f8_9efc_e68bc2413300
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1c9899ad_f5d2_47ae_a4f4_23df7795f84b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1035b4d3_225d_4107_b5ec_ce55570d8685
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8c28b0d7_e6b9_4516_98b8_110dde727b57
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a07622fa_c0cb_4d44_8137_24d69311d68b
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-carnitine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_83794bb4_636c_4b09_90c3_4d9802cd5dbf
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#dc4d38e8_f0b7_4aa2_acb5_a291caf38812
value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Nitrite
type: Species

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e6e122b9_9d83_41f0_88a3_9b34c40329ef
stoichiometry: 1.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9990bbdc_0d1e_4c6d_952c_fd187eccbbdc
stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_222cfabc_b3f8_4c60_9e79_e64a8c467e55
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2e994d6c_8c8d_401c_9370_b8964670abd6
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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reversible: true
name: sulfite/nitrite reductase
type: Reaction
fast: false
notes: GPR_ASSOCIATION: RSP_1942 GENE_LIST: RSP_1942; SUBSYSTEM: Sulfur metabolism Equation: Hydrogen sulfide + 3 Oxidized ferredoxin + 3 H2O <=> Sulfite + 3 Reduced ferredoxin + 8 H+ Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#_3854c17c_6d80_4c52_977c_a4ad23c26977
fast: false
type: Reaction
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: Diphosphate[p] + H+[p] <=> Diphosphate + H+ Confidence Level: 1
name: Diphosphate transport via proton symport
reversible: true

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f7fb718f_2b47_441d_b38b_ac8bafdf8831
stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: beta-Alanine[p]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: meso-Tartaricacid[e]
type: Species

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: tRNA(His)
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#c0c79979_5dcd_4f2e_9f0a_721cda1290ba
notes: GPR_ASSOCIATION: RSP_2887 GENE_LIST: RSP_2887; SUBSYSTEM: Starch and sucrose metabolism Equation: Glycogen + Orthophosphate <=> D-Glucose 1-phosphate Confidence Level: 3
fast: false
reversible: false
name: glycogen phosphorylase
type: Reaction

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value: 0.0
type: LocalParameter

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type: Reaction
reversible: false
name: (S)-Lactate via proton symport
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: (S)-Lactate[p] + H+[p] <=> (S)-Lactate + H+ Confidence Level: 1
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_2a392eb2_aa87_4beb_890a_f63dfb007ec7
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0c1df5b9_34c9_4e1a_ba8e_619e15320862
reversible: true
name: Inosine transport via proton symport
type: Reaction
fast: false
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: Inosine[p] + H+[p] <=> Inosine + H+ Confidence Level: 1

http://identifiers.org/biomodels.db/MODEL1304240000#f513cdb6_e95d_4069_85b1_97a156ac7502
stoichiometry: 1.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_72cea856_94d6_41ed_9664_c3a7f18b0b41
value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Deoxy-D-glucose[p]
type: Species

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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name: glycyl-tRNA synthetase
type: Reaction
fast: false
notes: GPR_ASSOCIATION: RSP_1856 and RSP_1858 and (RSP_4296 or RSP_4305 or RSP_4344) GENE_LIST: RSP_1856; RSP_1858; RSP_4296; RSP_4305; RSP_4344; SUBSYSTEM: Aminoacyl-tRNA biosynthesis Equation: ATP + Glycine + tRNA(Gly) <=> AMP + Diphosphate + Glycyl-tRNA(Gly) Confidence Level: 2
reversible: false

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_1862 GENE_LIST: RSP_1862; SUBSYSTEM: Folate biosynthesis Equation: 2-Amino-7,8-dihydro-4-hydroxy-6-(diphosphooxymethyl)pteridine + 4-Aminobenzoate <=> Diphosphate + Dihydropteroate Confidence Level: 2
type: Reaction
name: dihydropteroate synthase
reversible: false
fast: false

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reversible: false
name: Gly-Glu dipeptidase
type: Reaction
fast: false
notes: GPR_ASSOCIATION: RSP_1982 or RSP_1379 or RSP_2899 GENE_LIST: RSP_1982; RSP_1379; RSP_2899; SUBSYSTEM: Dipeptide metabolism Equation: Gly-Glu + H2O <=> Glycine + L-Glutamate Confidence Level: 1

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 5,6-Dihydrothymine
type: Species

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type: SpeciesReference

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type: SpeciesReference

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type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (2R)-Ethylmalonyl-CoA
type: Species

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type: LocalParameter

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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type: SpeciesReference

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type: SpeciesReference

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type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Cu2+[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_451fefd4_9d15_44d1_a4d6_75ceb38f4d7a
reversible: false
type: Reaction
notes: GPR_ASSOCIATION: RSP_0184 GENE_LIST: RSP_0184; SUBSYSTEM: Alanine, aspartate and glutamate metabolism Equation: N-Carbamyl-L-glutamate + H2O + H+ <=> L-Glutamate + NH3 + CO2 Confidence Level: 2
name: allantoate amidohydrolase
fast: false

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Mannose 6-phosphate[p]
type: Species

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notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Gluconate[e] <=> Gluconate[p] Confidence Level: 2
fast: false
reversible: true
name: Gluconate transport via diffusion
type: Reaction

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type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Deoxy-D-glucose 6-phosphate[e]
type: Species

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: S-Adenosyl-L-methionine
type: Species

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type: LocalParameter

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type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Ala-Asp[e]
type: Species

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_255fbd1a_28b0_4c39_a8d8_80c1e895bfc0
value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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type: SpeciesReference

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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type: Reaction
fast: false
reversible: false
notes: GPR_ASSOCIATION: RSP_1555 GENE_LIST: RSP_1555; SUBSYSTEM: Purine metabolism Equation: 5-Hydroxyisourate + H2O <=> 5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate + H+ Confidence Level: 2
name: transthyretin-like protein

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Alanyl-Glycine[p]
type: Species

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 4-Aminobutyraldehyde[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#a61104f6_2945_406d_b245_2e4db0192d44
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Cellobiose
type: Species

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ba3210ce_affb_4bcd_bddb_86c847f82239
value: 1000.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Lauroyl-CoA
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#c43af192_7e2c_4da9_9015_5340eda2fd72
fast: false
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: CMP[p] + H+[p] <=> CMP + H+ Confidence Level: 1
reversible: true
name: CMP transport via proton symport
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_434ba2e3_348c_4497_a382_ed433956f8a7
stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_67d5fa7a_dec7_4baa_abae_8c6802148752
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c05db67e_934c_4916_bc6b_0ff542c7b9aa
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#df988af8_b97c_4dfd_9960_e8b112fec886
reversible: true
name: lipoate-protein ligase B
type: Reaction
notes: GPR_ASSOCIATION: RSP_1878 GENE_LIST: RSP_1878; SUBSYSTEM: Lipoic acid metabolism Equation: Octanoyl-[acp] + Apoprotein <=> Protein N6-(octanoyl)lysine + Acyl-carrier protein + H+ Confidence Level: 2
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_2a2554d6_4e76_4c66_b292_0db0a4258573
value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_11a07fe5_7b98_4dde_8539_5ecb51b217e8
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_99473ec0_46f6_4147_8d6d_d30f0ba430bd
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_89fdfe59_29fd_4f0c_b734_7661218403f9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d8776a67_eb76_4d14_af36_1e0f3b970ae2
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d1afceaa_b26f_4627_b5be_df1f983a75f8
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3bb05d27_f150_4373_8f8f_c518dff614e4
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8e2fd594_1a7b_4c76_8fa7_1b5109f3c514
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Fatty acid biosynthesis Equation: Hexadecanoyl-[acp] + Reduced Ferredoxin + Oxygen + 2 H+ <=> Hexadecenoyl-[acyl-carrier protein] + Oxidized Ferredoxin + 2 H2O Confidence Level: 1
type: Reaction
fast: false
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#d47f3f6b_3ece_473f_ad28_1850274e36c8
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d7bbac95_a985_4bb4_8485_964f509bfc35
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3b2dfa05_fc5b_4e15_9ff3_e086c0a307e7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7eb16027_bc45_43a0_958d_43f2ac2a2596
stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Hydrogen[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_06bb132e_ac41_473e_bd9b_eb1672e484b3
value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Phosphoglycolate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b2c66c4d_33a9_4b76_9b30_315947a73501
stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: trans-Tetradec-2-enoyl-[acp]
type: Species

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type: SpeciesReference

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type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

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type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

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type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1596dcb5_a8c7_4708_8b5c_f6f8b459107a
type: Reaction
fast: false
name: bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
reversible: false
notes: GPR_ASSOCIATION: RSP_2503 GENE_LIST: RSP_2503; SUBSYSTEM: Amino sugar and nucleotide sugar metabolism Equation: Acetyl-CoA + alpha-D-Glucosamine 1-phosphate <=> CoA + N-Acetyl-alpha-D-glucosamine 1-phosphate + H+ Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#_05b855ad_2c8e_43b3_979f_97ad325c3fa0
value: -1000.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
type: Species

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Cysteate[p]
type: Species

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reversible: true
name: amidophosphoribosyltransferase
notes: GPR_ASSOCIATION: RSP_2454 GENE_LIST: RSP_2454; SUBSYSTEM: Purine metabolism Equation: 5-Phosphoribosylamine + Diphosphate + L-Glutamate <=> L-Glutamine + 5-Phospho-alpha-D-ribose 1-diphosphate + H2O Confidence Level: 2
type: Reaction
fast: false

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: UDP-N-acetyl-D-glucosamine
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

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type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Allantoin[e]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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type: SpeciesReference

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type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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name: thiamine ABC transporter
notes: GPR_ASSOCIATION: (RSP_1391 and RSP_1392 and RSP_1393) GENE_LIST: RSP_1391; RSP_1392; RSP_1393; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + thiamine[p] <=> ADP + H+ + Orthophosphate + thiamine Confidence Level: 2
fast: false
reversible: false
type: Reaction

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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type: Reaction
reversible: true
notes: GPR_ASSOCIATION: RSP_1970 GENE_LIST: RSP_1970; SUBSYSTEM: Purine metabolism Equation: 10-Formyltetrahydrofolate + 5'-Phosphoribosylglycinamide <=> Tetrahydrofolate + 5'-Phosphoribosyl-N-formylglycinamide + H+ Confidence Level: 2
name: phosphoribosylglycinamide formyltransferase

http://identifiers.org/biomodels.db/MODEL1304240000#f92900d4_f400_49d1_bbed_e76c845630d0
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: L-isoleucine[e] <=> L-isoleucine[p] Confidence Level: 2
fast: false
reversible: true
name: L-isoleucine transport via diffusion
type: Reaction

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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fast: false
type: Reaction
name: ABC L-histidine transporter
reversible: false
notes: GPR_ASSOCIATION: RSP_3457 and RSP_3459 and RSP_3458 and RSP_3460 GENE_LIST: RSP_3457; RSP_3459; RSP_3458; RSP_3460; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + L-histidine[p] <=> ADP + H+ + Orthophosphate + L-histidine Confidence Level: 2

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6637f711_d22d_4125_ac24_76ebf9298e71
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e873779b_38fb_4a13_bc6a_661612bb523f
value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Gly-Gln[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#c29aa3b2_aecc_44ed_af84_2e0a6a517596
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: 2',3'-Cyclic AMP[p] + H+[p] <=> 2',3'-Cyclic AMP + H+ Confidence Level: 1
fast: false
reversible: true
name: 2',3'-Cyclic AMP via proton symport
type: Reaction

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Fructose[e]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
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name: Starch
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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
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stoichiometry: 1.0
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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
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stoichiometry: 1.0
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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_48abad9a_24b2_4e1c_92ec_3aa40e6ea0de
stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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reversible: false
type: Reaction
fast: false
name: Ala-Asp dipeptidase
notes: GPR_ASSOCIATION: RSP_1982 or RSP_1379 or RSP_2899 GENE_LIST: RSP_1982; RSP_1379; RSP_2899; SUBSYSTEM: Dipeptide metabolism Equation: Ala-Asp + H2O <=> L-Alanine + L-Aspartate Confidence Level: 1

http://identifiers.org/biomodels.db/MODEL1304240000#_0416ea17_25f5_434b_bcba_0f8a537aa60b
stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Tyrosyl-tRNA(Tyr)
type: Species

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Mannose[e]
type: Species

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_30a0c15f_f8d9_49b6_84fe_00ca02bb2fb2
stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ad313780_dcc4_4451_aa36_8ad2145ebf4d
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-lactamide[p]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

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notes: GPR_ASSOCIATION: RSP_0863 and RSP_0862 GENE_LIST: RSP_0863; RSP_0862; SUBSYSTEM: Valine, leucine and isoleucine biosynthesis Equation: D-erythro-3-Methylmalate <=> 2-Methylmaleate Confidence Level: 2
fast: false
reversible: true
name: isopropylmalate isomerase
type: Reaction

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#dfa779f9_d347_43ad_b856_562832af122d
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_050b58ee_c873_4abf_a003_2ed175fe02a7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0f87419c_b943_4561_af3c_e5f9f14b042f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_61e81869_80b7_44d7_ac01_26988b30e04a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f04b64fc_4a45_4a64_b687_d560ee5fad5b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a1ee5f2d_4b69_4886_9822_20aeecdd3949
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3886c125_6528_44ac_aed7_1930fcfce010
value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Benzoate[e]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Ethanol[e]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: 2-Hydroxybutanoic acid[p] + H+[p] <=> 2-Hydroxybutanoic acid + H+ Confidence Level: 1
reversible: true
name: 2-Hydroxybutanoic acid transport via proton symport
fast: false
type: Reaction

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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type: SpeciesReference

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type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Methylmaleate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#eae9ce70_5457_4121_9034_3ac1f069545e
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: 4-Aminobutyraldehyde[e] <=> Confidence Level:
fast: false
reversible: false
name: 4-Aminobutyraldehyde exchange
type: Reaction

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b23a01da_04b0_41ec_b4f4_938f984d8cc9
notes: GPR_ASSOCIATION: RSP_2771 or RSP_0782 GENE_LIST: RSP_2771; RSP_0782; SUBSYSTEM: Purine metabolism Equation: Guanosine 3'-diphosphate 5'-triphosphate + H2O <=> Guanosine 3',5'-bis(diphosphate) + Orthophosphate + H+ Confidence Level: 2
type: Reaction
fast: false
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#f8c1b601_0518_408c_96a3_6556e6c06cd5
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Guanine[e] <=> Guanine[p] Confidence Level: 2
fast: false
reversible: true
name: Guanine transport via diffusion
type: Reaction

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Molybdate
type: Species

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d54bcdd8_74d6_4e0e_b790_2c50edafb7db
stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

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type: SpeciesReference

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value: 0.0
type: LocalParameter

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fast: false
reversible: true
type: Reaction
notes: GPR_ASSOCIATION: RSP_3871 and RSP_3869 and RSP_3868 GENE_LIST: RSP_3871; RSP_3869; RSP_3868; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + Molybdate[p] <=> ADP + H+ + Orthophosphate + Molybdate Confidence Level: 3
name: ABC molybdate transporter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: tRNA(Pro)
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a92ec71a_7f7b_415e_a90f_d23719235941
stoichiometry: 0.203795439131989
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_83980701_22af_4c10_a2dd_73f4a985bd66
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d01103cc_3cf4_40ad_80e7_fb6ccf5d8ff9
value: -1000.0
type: LocalParameter

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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Alanyl-Glycine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_8eb64e4e_147e_4c36_ac9d_456f61256c95
type: Reaction
fast: false
notes: GPR_ASSOCIATION: RSP_0602 GENE_LIST: RSP_0602; SUBSYSTEM: Porphyrin and chlorophyll metabolism Equation: Adenosyl cobinamide + GTP <=> Adenosyl cobinamide phosphate + GDP + H+ Confidence Level: 3
reversible: true
name: adenosylcobinamide kinase

http://identifiers.org/biomodels.db/MODEL1304240000#bf97cafe_cf86_487e_bd39_a9d35aa4425c
value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_28b138fc_cb7a_483c_a44c_29155a6e0f23
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_18c44630_9fc5_447f_bf70_e2dd31c2aa3e
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1102a3b0_85c9_41a7_aee7_bcd8eb23a8ec
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Met-Ala[e] <=> Met-Ala[p] Confidence Level: 1
fast: false
reversible: true
name: Met-Ala transport via diffusion
type: Reaction

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stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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name: isocitrate/isopropylmalate dehydrogenase / tartrate dehydrogenase
reversible: false
notes: GPR_ASSOCIATION: RSP_3389 or RSP_3388 GENE_LIST: RSP_3389; RSP_3388; SUBSYSTEM: Glyoxylate and dicarboxylate metabolism Equation: (R)-Malate + NAD+ <=> Pyruvate + CO2 + NADH Confidence Level: 4
fast: false
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_708fbc55_84e1_45eb_b50d_b2d2c2ab9643
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a138a61c_452f_4f63_afba_001ddfd5182f
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Acetoacetyl-CoA
type: Species

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_147b332c_451a_4557_8113_648eb678d59d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_40f4ec5f_ec12_49e1_85ad_01150ee029e2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1a5d838b_6ef5_4001_bdde_ddde42500a92
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Trimetaphosphate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#e2b27bfd_6e46_4576_ad21_5968f5ef83c3
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f38c89f6_4f1a_42b7_9d93_4af345d2589a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_94e1f76a_0e0e_413f_9984_caedede09d12
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_533394f6_dc4c_41c7_afdc_afdaf35438b7
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d8eb465f_b740_42e3_bbe7_922cf1306fd6
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f40db2d2_512d_47d3_b19b_ce9c98e1e146
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2a083545_5256_4c7b_8493_8792bb1f35ff
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f7ac70a3_e348_43be_bd65_3b88293bbb0d
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Urea[e] <=> Confidence Level:
fast: false
reversible: false
name: Urea exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_75f84cf9_a6b7_4d44_a507_ce49f3de4fe1
value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_045d249a_527d_4abf_b255_f10f27601cfc
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5c5a47bb_6bd4_4fcd_9766_c988e9ec8be9
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2,3-Bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl1-phosphate
type: Species

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c38c1a42_390b_45cf_9228_796bca693a46
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4bc13d38_9cbc_464c_b57f_1a3ef9752505
notes: GPR_ASSOCIATION: RSP_0267 GENE_LIST: RSP_0267; SUBSYSTEM: Carotenoid biosynthesis Equation: 3,4-Dihydroanhydrorhodovibrin + H2O <=> 3',4'-Dihydrorhodovibrin Confidence Level: 3
fast: false
reversible: true
name: hydroxyneurosporene synthase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#e3d8d92b_61ed_436c_aa0d_929d40a48889
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_10247dcc_948c_4a16_a8af_be9af7d35d8c
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d7409946_5164_4b65_b358_28e41ce1b4a6
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_02653206_95e7_48dc_be34_68c778504166
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#aeba1e6e_5902_4381_a613_544acf8155a4
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0ff61953_4b66_48f0_a8b8_fdd53c58023b
name: meso-Tartaric acid via proton symport
fast: false
type: Reaction
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: meso-Tartaric acid[p] + H+[p] <=> meso-Tartaric acid + H+ Confidence Level: 1
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#f6ffb367_7c82_44db_85db_737d761a270e
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: N-Acetylornithine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_5c93f58d_a043_408a_8245_88ef8b028cbf
notes: GPR_ASSOCIATION: RSP_1597 GENE_LIST: RSP_1597; SUBSYSTEM: Purine metabolism Equation: Deoxyadenosine + H2O + H+ <=> Deoxyinosine + NH3 Confidence Level: 2
type: Reaction
fast: false
reversible: false
name: adenosine deaminase

http://identifiers.org/biomodels.db/MODEL1304240000#_1a9ba6f2_0f65_4360_ae56_faa4814638c4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 6,7-Dimethyl-8-(1-D-ribityl)lumazine
type: Species

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value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_710af51d_e054_4dcb_ae9b_105ceb7de8e4
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Nitrite[e] <=> Nitrite[p] Confidence Level: 2
fast: false
reversible: true
name: Nitrite transport via diffusion
type: Reaction

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: tRNA(Ala)
type: Species

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9d096d30_71b4_442b_bd49_8372c2a09d74
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_91e22b6d_35c3_4389_9f6c_ef6ecc3335c0
value: 1000.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3'-CMP[p]
type: Species

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#dd813884_96e7_43f7_b0f6_c8386762a4f5
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_35771189_23e2_46a9_abad_141bdb04975e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_952a91dd_f69a_4531_831d_b34e6403de24
value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Adenosine3',5'-bisphosphate
type: Species

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Nitrate
type: Species

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value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7af00c07_59d9_4b32_8fb4_770e9c0d7fd0
stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 4-Phospho-D-erythronate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_208e55b6_0db3_436c_9160_dca6dcea13e4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c8fd4c4e_dd6b_4b97_aca5_29c9ea9fa285
reversible: true
fast: false
type: Reaction
name: Acyl-CoA dehydrogenase
notes: GPR_ASSOCIATION: RSP_0156 or RSP_1679 GENE_LIST: RSP_0156; RSP_1679; SUBSYSTEM: Fatty acid biosynthesis Equation: 2-Methylpropanoyl-CoA + FAD <=> 2-Methylprop-2-enoyl-CoA + FADH2 Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#_0371da09_a52d_48da_bfec_176cddf2f2ac
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5a8f11ec_fb29_420c_8183_c234f5db9c89
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b8b28ae3_d55b_406c_a83c_3d40e84b9f54
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Oxobutanoate[e]
type: Species

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_899b47dd_2b08_479d_aae7_0e6a3ef51125
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1410ea08_8c8d_4e96_a5a1_7910000c0344
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_846d13b3_5db4_40e3_9f44_876cb60c0df5
notes: GPR_ASSOCIATION: RSP_1989 and (RSP_4309 or RSP_4328 or RSP_4337) GENE_LIST: RSP_1989; RSP_4309; RSP_4328; RSP_4337; SUBSYSTEM: Aminoacyl-tRNA biosynthesis Equation: ATP + L-Valine + tRNA(Val) <=> AMP + Diphosphate + L-Valyl-tRNA(Val) Confidence Level: 2
fast: false
reversible: false
name: valyl-tRNA synthetase
type: Reaction

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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type: Reaction
name: thiamine-phosphate pyrophosphorylase
notes: GPR_ASSOCIATION: RSP_0648 or RSP_3828 GENE_LIST: RSP_0648; RSP_3828; SUBSYSTEM: Thiamine metabolism Equation: 2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + 4-Methyl-5-(2-phosphoethyl)-thiazole + 2 H+ <=> Diphosphate + Thiamin phosphate Confidence Level: 2
reversible: true

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2c04f107_8ef0_4a68_82a0_0596eb5deefb
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1ad5013a_5452_45f5_a7f5_5eef0ef7833c
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_93cf938e_7b6f_4519_be8d_675bb3078ec5
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_79566f3b_88f7_4d79_bbb1_ac1315dc4e99
value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 2.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ec267cbb_1625_4ecb_b1a6_324bb8045a82
value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_870a54d3_9403_4735_ac7e_335802ff856b
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2be37205_a7ba_4d11_9b47_01482bdd7feb
stoichiometry: 1.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ff03426b_9dfc_41bd_a38f_f3e451c65081
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#da3af755_549b_4654_9cb2_298b20db24d2
value: 1000.0
type: LocalParameter

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stoichiometry: 0.400398098059319
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-O-Phosphoserine[p]
type: Species

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stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_38c393c5_7e68_44b1_8241_a6b381a608d2
value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_917c218f_362f_4ec9_977b_a5904f0e21f7
notes: GPR_ASSOCIATION: RSP_2196 GENE_LIST: RSP_2196; SUBSYSTEM: Fatty acid metabolism Equation: (S)-Hydroxyoctanoyl-CoA <=> trans-Oct-2-enoyl-CoA + H2O Confidence Level: 2
fast: false
reversible: true
name: enoyl-CoA hydratase
type: Reaction

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value: 0.0
type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2,3,2'3'-Tetrakis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6-beta-D-
type: Species

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_300389da_b78b_4fb3_bd34_9cb8669171e8
value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose5-phosphate
type: Species

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_021f4df0_ab05_43f8_bf77_66d81b927c3a
value: 0.0
type: LocalParameter

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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Tyrosine[e]
type: Species

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_030fc053_597f_458a_8c78_6973cd90b406
stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

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stoichiometry: 2.0
type: SpeciesReference

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type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_65282f21_0a7d_4f5d_9c9c_60382cec2c9c
value: 1000.0
type: LocalParameter

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stoichiometry: 4.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2a57a16f_f1f0_49cb_9629_6020ea3f96ac
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_15d110c1_e18c_4573_abd0_50dbcb10aec5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4fd6187f_a7dd_4f08_8f1b_e1722aecd320
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ce2d1bef_8ff6_4432_9dea_8e05647e6344
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_728909df_9aaf_412a_b4e4_591986b5d090
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#cf7b900b_729a_442e_918b_4756b9ac33b3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b06b8990_2405_49b6_827e_c67370b636f5
fast: false
name: 2-Phosphoglycolate transport via proton symport
reversible: true
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: 2-Phosphoglycolate[p] + H+[p] <=> 2-Phosphoglycolate + H+ Confidence Level: 1
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_4067293d_6a5c_4e66_b409_45f7c992ffc8
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fc4cf561_184e_45e7_b3ef_3e66692902dc
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_13a2a4b9_54ee_49fb_a935_e84fe93bee50
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#deeb12b2_57f1_46ca_9795_88476b376ab2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c4ceee2b_6aab_4c3e_84f7_6adada4e072b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_994a0278_9544_43e3_bd8d_968b0d4d960f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3b7e2ff7_bfd6_4f08_9ea2_eec1eb97c6dd
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f362a469_f622_401d_bc2b_cdb9cae7096e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2e1e33fb_cc71_4359_8a78_3468bc904b0d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5c56d63c_a677_481e_b001_2d83429725ec
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Nicotinate[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_08940cf6_8673_4ca9_bd3d_6cca60e5a24b
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_671ef5d7_93d1_4716_8b8e_ae8ad79e002c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_94a8fc1f_bc28_4351_9e68_49a9c11b05d5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5171e703_c076_4feb_9704_74906feccd01
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6de3cbc5_15ea_40f5_b6a4_6ce6e2a07e4c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_03b624d5_a2fc_4fe7_a2b0_652617300686
type: Reaction
reversible: false
name: formate dehydrogenase
fast: false
notes: GPR_ASSOCIATION: (RSP_1078 and RSP_1079 and RSP_1080 and RSP_1082) or (RSP_1078 and RSP_1079 and RSP_1082 and RSP_1821) GENE_LIST: RSP_1078; RSP_1079; RSP_1080; RSP_1082; RSP_1078; RSP_1079; RSP_1082; RSP_1821; SUBSYSTEM: Glyoxylate and dicarboxylate metabolism Equation: Formate + NAD+ <=> CO2 + NADH Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#bcc22342_054e_48d5_b15c_1b7d639360cb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0fde7af4_0236_451f_91bf_c07ec5d37362
fast: false
name: lipoate-protein ligase B
type: Reaction
reversible: true
notes: GPR_ASSOCIATION: RSP_1878 GENE_LIST: RSP_1878; SUBSYSTEM: Lipoic acid metabolism Equation: Lipoyl-[acp] + Apoprotein <=> Protein N6-(lipoyl)lysine + Acyl-carrier protein + H+ Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#_54b0389f_a93e_4d36_81ec_81744aaa287f
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_21a66f91_8a72_40b3_88ee_39eaf042ebda
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_759bb61e_4333_4c37_ae03_125a42399cf6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Sucrose[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#e8b5c51d_acb6_4511_893f_3b6442e55410
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_17e23981_ef69_4681_9a80_d1323b71483d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7a91e5c0_e9ac_4b8e_825d_f2ca39a331d5
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Transport, outer membrane Equation: Photon[e] <=> Photon Confidence Level: 2
fast: false
reversible: false
name: Photon transport
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_56e26e66_6ac1_476d_89f4_08890685963a
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_14a41ea0_280f_4124_96d4_22cb3dc4f02e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_50d26efa_437d_49d8_a38e_5590782444a9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#acb42e77_2b5c_4243_a884_2c549eb0064e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0da5d30e_8edc_48e4_b3c7_7c8a769d62ed
fast: false
name: ABC Cu2+ transporter
reversible: false
notes: GPR_ASSOCIATION: (RSP_3413 and RSP_3414 and RSP_3415 and RSP_3416) or (RSP_3392 and RSP_3391 and RSP_3390) or (RSP_2403 and RSP_2404 and RSP_2405) or (RSP_1439 and RSP_1437 and RSP_1438) or (RSP_3079 and RSP_3220 and RSP_3222 and RSP_3221) GENE_LIST: RSP_3413; RSP_3414; RSP_3415; RSP_3416; RSP_3392; RSP_3391; RSP_3390; RSP_2403; RSP_2404; RSP_2405; RSP_1439; RSP_1437; RSP_1438; RSP_3079; RSP_3220; RSP_3222; RSP_3221; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + Cu2+[p] <=> ADP + H+ + Orthophosphate + Cu2+ Confidence Level: 2
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_6c5ce81a_7f29_42ac_80a7_606dd22d5ecc
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_283d6891_e5b7_45dd_afb6_fd07cd870a6b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e6ad78fb_0a70_489c_81b7_170ee86175e9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e85f3963_9b1c_4c62_a9d7_c83bd87a715e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fb653ab1_3805_4d8b_a4fb_a50f554a490a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8e5f33d5_f3e3_40fc_85c5_5d19cf91f410
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3d3a4619_db49_413b_bba6_2c420b2f1d2a
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3d92aaca_3429_4fc0_90a6_3280c60f341e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_93030fb6_978d_4a81_80f7_6cc50778a51e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9dd7e259_f963_4283_9ae8_d95b335ecc06
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f1fe8f41_4234_4bf1_a4b4_3e6af785e449
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bb66441e_1013_4b30_b299_00a5f537916d
reversible: false
name: glycine cleavage system aminomethyltransferase T
fast: false
notes: GPR_ASSOCIATION: RSP_2193 GENE_LIST: RSP_2193; SUBSYSTEM: Glycine, serine and threonine metabolism Equation: Glycine + Tetrahydrofolate + NAD+ <=> 5,10-Methylenetetrahydrofolate + NH3 + CO2 + NADH Confidence Level: 2
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_59eb5c70_9004_4a89_ba98_70ccd93dfb97
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_05616892_2c3c_4d6e_877b_ee89385d1800
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f19ff02d_23e4_40d2_98d9_9fc798b27aba
type: Reaction
name: putative asparagine synthase
reversible: true
fast: false
notes: GPR_ASSOCIATION: RSP_2557 or RSP_7386 GENE_LIST: RSP_2557; RSP_7386; SUBSYSTEM: Alanine, aspartate and glutamate metabolism Equation: ATP + L-Aspartate + L-Glutamine + H2O <=> AMP + Diphosphate + L-Asparagine + L-Glutamate + H+ Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#_6c77ed1a_f59f_4f92_b799_cf6308af782a
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: (S,S)-Tartaric acid[e] <=> (S,S)-Tartaric acid[p] Confidence Level: 1
fast: false
reversible: true
name: (S,S)-Tartaric acid transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_7ee5a54f_4e07_4b07_8446_b25238aa1bd4
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b5555ceb_8727_48aa_8770_bfddff192672
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bc384997_7b8c_48c9_8aa2_e649dfe6b1da
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b9783feb_2ea4_4ae8_938e_a5108b0f7078
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Propanoyl-CoA
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_0ffedf53_47c7_48fc_a046_18f33804efd0
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_66ac0925_55a7_48a6_a7bf_abfc4b6f89fd
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_36fb311a_bee4_4d02_8cd6_d517a844277a
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Alanyl-D-alanine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#f5b613e6_97c4_4f10_8dbe_6241325e3979
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d5798bc5_5fb8_48e0_95fd_b2701afcbf9d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_53b8a8a0_c653_4786_afab_a3838424f2ff
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6ebf3207_7cd9_46f2_9c9d_6f6272faa542
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a8e4657e_44c4_4599_8273_1b472f0b8549
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a80efdd8_b1de_4d00_af81_dc5c89ebf77b
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Sodium[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_819c3803_ab63_460a_b72d_243f29699bb3
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4c24ee11_c0c7_47a0_80cf_e7c336a2fbc4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_42941be0_fa7c_4187_9974_7250dfa5cc21
notes: GPR_ASSOCIATION: RSP_1610 GENE_LIST: RSP_1610; SUBSYSTEM: Ascorbate and aldarate metabolism Equation: D-Galactarate <=> 5-Dehydro-4-deoxy-D-glucarate + H2O Confidence Level: 2
fast: false
reversible: false
name: D-galactarate hydro-lyase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#fa545d0d_0c2d_40a2_be17_d497d0f356e9
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Uracil[e] <=> Confidence Level:
fast: false
reversible: false
name: Uracil exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_9c890fd8_8951_495b_8ec5_666f45869df5
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d3a23849_8454_43e1_881c_aa86d6a6ad02
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_754d856f_1389_458e_aa24_d97ab2ef4ca3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_07a4ddc5_0e19_4428_b6da_df1e200e951b
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Photon[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_13716196_8a50_4e4c_9b49_8a830791eb7e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9777efed_086c_49dd_afba_387eac2c14a6
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d5bc9d21_0153_43a3_b90b_496ab9076479
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_984a03f8_5cd2_4ed9_a161_09c589a3c780
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8aeed725_8934_4088_828f_3422f30d582d
notes: GPR_ASSOCIATION: RSP_6215 GENE_LIST: RSP_6215; SUBSYSTEM: Phenylalanine, tyrosine and tryptophan biosynthesis Equation: L-Arogenate + NAD+ <=> L-Tyrosine + CO2 + NADH Confidence Level: 2
fast: false
reversible: false
type: Reaction
name: cyclohexadienyl dehydrogenase

http://identifiers.org/biomodels.db/MODEL1304240000#_7b89f101_c96a_49a8_9daa_4adce917533a
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Acyl-CoA
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_3576933b_8c64_4183_bbf9_52858e3cf02c
reversible: true
type: Reaction
fast: false
name: D-Mannose 6-phosphate transport via proton symport
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: D-Mannose 6-phosphate[p] + H+[p] <=> D-Mannose 6-phosphate + H+ Confidence Level: 1

http://identifiers.org/biomodels.db/MODEL1304240000#ab1e760c_06b8_4d1c_9232_40d4cc71155f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8d73fd21_1fce_4a9e_8190_1ee9cd08607a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e5b3f5bd_4c5d_46da_8d70_7a72f122adaa
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c48cc7cf_307a_4ee6_b840_e9e99166b05a
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c829f5bb_fe07_49ee_810d_153b15f4ceb7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b81d3d24_7d95_4a66_ac71_be1e6d5eb8c1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c716be0b_71fd_45ec_88ca_efb80487033d
reversible: true
type: Reaction
name: (R)-1-Aminopropan-2-ol:NAD+ oxidoreductase
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Glycine, serine and threonine metabolism Equation: (R)-1-Aminopropan-2-ol + NAD+ <=> Aminoacetone + NADH Confidence Level: 1
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_590efb2d_788a_452e_a212_10548fb83cbe
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_67b2286f_0eab_4864_9957_d20bfa3ccdae
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fca724c8_6dbb_4698_abc7_32a9ec5bd683
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2b0f28ae_e6a4_4def_8694_41c70d152265
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d2e445a9_bb75_43f9_b2b6_f1c114d6a9f8
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_631b2976_aed7_41b4_ac26_959553420b7d
notes: GPR_ASSOCIATION: RSP_1861 GENE_LIST: RSP_1861; SUBSYSTEM: Folate biosynthesis Equation: 2-Amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine <=> Glycolaldehyde + 2-Amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine Confidence Level: 2
fast: false
reversible: true
name: dihydroneopterin aldolase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_79079952_5753_49f9_870b_fc9ab40e0834
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_30a16843_5261_47f8_abc9_84e7272f35a3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_51464393_aa2d_442d_813f_fc3716068396
reversible: true
type: Reaction
fast: false
name: bacteriochlorophyll synthase, 23 kDa subunit (BchJ)
notes: GPR_ASSOCIATION: RSP_0280 GENE_LIST: RSP_0280; SUBSYSTEM: Porphyrin and chlorophyll metabolism Equation: Divinylprotochlorophyllide + NADPH + H+ <=> Protochlorophyllide + NADP+ Confidence Level: 3

http://identifiers.org/biomodels.db/MODEL1304240000#_2fbc1ee4_da05_4f08_a844_fcc788eef4cb
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Indoleglycerolphosphate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_0a13e8ac_3f4e_44e8_9430_7d2028cdb125
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e7966bd6_6a10_4130_a20e_06b18800883d
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#dfad50be_a15d_4d49_8502_8192795e5d83
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Asparagine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_04a5766d_9b4c_40e3_95ca_a1c0578272b1
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6fe7a32c_9d33_4734_b0ee_7dec93916848
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7ef58377_dfc7_4500_94cb_0b9bc829ff13
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#aeedcd5b_3e1e_4c99_a6b0_e61914f46eb5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b0534028_9a9d_469a_89b8_0ce88bdc6399
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d7926306_cc47_48da_90cc_b12f05382ca9
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: L-methionine[e] <=> L-methionine[p] Confidence Level: 2
fast: false
reversible: true
name: L-methionine transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_60c9213f_7796_48bb_8844_1a4e04a608ca
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4b825533_5cae_4eaf_9fec_3fa1f233bf1a
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_67998e74_7f5d_4031_8c88_abb74458cbfa
type: Reaction
fast: false
notes: GPR_ASSOCIATION: RSP_0750 GENE_LIST: RSP_0750; SUBSYSTEM: Terpenoid backbone biosynthesis Equation: trans,trans-Farnesyl diphosphate + 5 Isopentenyl diphosphate <=> all-trans-Octaprenyl diphosphate + 5 Diphosphate Confidence Level: 2
name: geranylgeranyl pyrophosphate synthase/polyprenyl synthetase
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#_7e2985bd_ce3a_46ea_bfac_b62676edff0b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d696d3da_b24f_43e7_89e5_f9d1b8929d9e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e3c4ca0a_4e6e_4d08_ae8b_644c8859a9a0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c35b5e06_217b_4358_a4cf_a9b9da07ef3a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_987e1c3c_34c5_4791_b3f4_95cf59362259
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_445afc43_0288_4218_928c_139bb1d44854
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#eda11445_becf_4a0b_8685_3fbdde87aaec
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_64879533_9cf1_455e_bc8a_1ddf70311208
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_61ec9f7e_36f0_4e12_a3b7_5ead13edeeaa
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a03ad95b_4395_4d3a_89ad_8540df4911e1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1ef9230d_6a72_4b73_8bd8_0b628fd9d08a
fast: false
name: L-arginine carboxy-lyase (agmatine-forming)
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Arginine and proline metabolism Equation: L-Arginine + H+ <=> Agmatine + CO2 Confidence Level: 1
type: Reaction
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#_911036d6_5c06_49df_a514_66d2fb4e8adc
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4bdb7eb2_e407_467a_80b5_c1fe24303e80
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f80db063_26aa_4d5e_8506_b9a3682a6ab9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_727b21c6_c179_4b0e_8155_cd286a6f6479
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8a46ea9a_f6ab_4224_8825_6a44b0d3613c
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c2e32e9c_4d55_41be_ab93_40aff4b4adc6
notes: GPR_ASSOCIATION: RSP_2645 GENE_LIST: RSP_2645; SUBSYSTEM: Pentose phosphate pathway Equation: 2-Dehydro-3-deoxy-6-phospho-D-gluconate <=> D-Glyceraldehyde 3-phosphate + Pyruvate Confidence Level: 2
fast: false
reversible: true
name: 2-keto-3-deoxy-phosphogluconate aldolase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#d021f5b4_4b44_4b22_a0f1_5ade2d1cc7aa
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1a70471e_0636_4395_a171_9e470fd6c268
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_27c337a9_35fd_4d8b_84e6_614bbc3e7e5d
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: 3-Phospho-D-glycerate[e] <=> 3-Phospho-D-glycerate[p] Confidence Level: 2
fast: false
reversible: true
name: 3-Phospho-D-glycerate transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_80d687a7_80ce_4694_a89f_4d2942398fdb
fast: false
type: Reaction
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + Succinamic Acid[p] <=> ADP + H+ + Orthophosphate + Succinamic Acid Confidence Level: 1
name: ABC Succinamic Acid transporter
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#_711a167a_ac7c_45ca_bf09_fb77214fc7c9
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fa01a099_942f_45e0_98b5_5eac2ba2f524
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_591d3c21_7da4_4b11_b650_45b49bba3835
fast: false
reversible: true
name: Acetoin transport via proton symport
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: Acetoin[p] + H+[p] <=> Acetoin + H+ Confidence Level: 1
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#d02b759b_6065_4157_9e2e_16f16aafbfa5
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: L-Cysteate[e] <=> Confidence Level:
fast: false
reversible: false
name: L-Cysteate exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#a1cbc7c7_0687_4284_ba88_bdff580b9a43
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_305bb757_c6b9_4c80_9c9c_d17045b29d55
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#df5712ef_021c_4dd4_905b_da5347c5b806
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0938c45b_06d0_4069_82d1_32837f2fc6b0
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b46f5357_3232_45b7_b4b3_5e9c3b392442
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f64a87ad_bdc6_4748_8470_1310662abe7a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_86d38ebf_ca2e_4c7f_bdd8_30d4fa48bf21
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_81c5845f_6703_4fb7_92a0_8cb6a8f02b60
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#eaf96043_5604_43ea_95d7_b6324b04935c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: GDP-4-dehydro-6-deoxy-D-mannose
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_7909aaeb_7217_47c6_8a73_6bd88d0dda65
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c44499b7_616d_44fb_892e_357fd978baab
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_186eb51f_6209_451b_9971_38b20736b742
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8de362f0_c92d_4984_85d4_c68fd51d4159
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_57cfcca6_64e0_46c6_9f26_e816ee952534
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_68d269ad_ddb6_4eef_9c71_844bd0d8997d
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: NH3[e] <=> Confidence Level:
fast: false
reversible: false
name: Ammonia exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_352443f1_33ee_4505_b9dc_73f6887d4db9
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c7396533_6b6e_4ca4_9dcf_38ede8d9433a
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Hydroxypropanoate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#faea6501_56fd_417b_bd0f_329e9b1a7fbb
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e4b9ac06_8405_47b3_8b5f_598173881536
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f324cbd1_86a2_4239_8618_790cea79b2d7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3f9a2403_7911_4fad_a946_65c6c2da3967
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 5-Aminopentanoate[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b8f54817_00fc_4c0a_a04f_be203456fe32
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f19af054_ffdd_4aed_b5d4_a47d8b922d67
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_62b5e473_e1ca_49f9_84aa_26d103e17866
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9649ecaf_5fb6_4167_bd3a_abf511358bc0
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b221f92e_410d_43e6_9a2f_b9544221ea8f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#cf669590_19a6_491c_a938_591c9b68fe34
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4077bd7c_194d_4435_85cd_4c7565e917e2
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b0314f3a_b0ff_4753_afe0_42dcc91f129f
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fd6e8bf1_1eb9_4488_8834_c8ea435c54d7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0edd7065_d916_4611_8757_a19d4da60eed
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_848ca753_0197_4c6a_bac0_227667641dcc
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2b0ee39b_061c_4287_bc34_5623801c63f2
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f5a22bff_5321_41c5_9a64_c009c7d2895d
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_823ce749_a6c6_47b8_ae77_a0c11dee39c6
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_80b4b0aa_c0d6_4396_a130_8401d526913c
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fbf76c95_4202_45a4_8a99_3c6fd77ca427
notes: GPR_ASSOCIATION: RSP_1538 GENE_LIST: RSP_1538; SUBSYSTEM: Amino sugar and nucleotide sugar metabolism Equation: CTP + D-Glucose 1-phosphate + H+ <=> Diphosphate + CDP-glucose Confidence Level: 2
reversible: true
fast: false
name: CTP:alpha-D-glucose-1-phosphate cytidylyltransferase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_08810261_f2a0_499c_9ec8_81b3cfd39f62
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_22af08b8_c303_4276_8895_ff62c2af2b3b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4c8cf8f3_2747_41dc_a2a4_0a78f3a5c651
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_468ba6fc_c573_4c2c_8c5b_7d90a8499ef6
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6fd2f3aa_df44_4ea5_9fd3_4b5665db34c1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_036a5f97_c9ed_4106_be21_2239a7466cb5
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7de31b86_1f76_4172_98cc_230146bf71f0
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0c83c412_3074_4454_809e_3b56ce5634d2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ce473373_4cb6_49ef_b37b_290627264532
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4f4518c6_b0ca_4b26_bb17_e5d4ff6161fb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9f8e7731_434e_4bb1_81d5_646277a9bce7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fe78fd9d_a7bf_49ae_aeb3_26824aab4ec8
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e9a42328_2285_438c_86ca_2df0bc1ad418
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 5-Methylhex-4-enoyl-CoA
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#f8ea551f_f62b_46b9_b718_fbfb18199eb8
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_75101dd7_88cf_4cea_914f_ab57cdbcc7fe
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f1d778bc_6532_420f_a716_bc05363fcaf2
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_02cdba0d_b9df_460f_b144_79126bfe7bb4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5f6700d4_a53a_4afc_b2bc_2fe5b84b75ff
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8f33c65d_9101_41e9_b471_b33b827d8cfc
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0c913580_bc21_4a55_81c4_57c3b0bc0ecb
name: 5'-Methylthioadenosine via proton symport
reversible: true
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: 5'-Methylthioadenosine[p] + H+[p] <=> 5'-Methylthioadenosine + H+ Confidence Level: 1
fast: false
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#a01342c1_0d7d_4c94_9406_8fcf251302e1
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#df913a7c_665f_4e8f_a6ef_30e83b95a82e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d711e42d_f678_40b1_b939_fad9338b311c
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9741112d_d5ca_4fce_b6d8_88a721036988
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ef7ba423_9d57_40aa_ba90_3d3498bd162b
stoichiometry: 4.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f22e21af_08a8_4215_8491_0086c6a29894
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d60c53e3_7e93_4f7b_81f6_8de76d6d2ce6
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_72aee5d8_27ab_462b_ab81_6ba85bd61303
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d98185fa_8652_4ada_b155_8392919ad60e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_13d08384_cee3_41c9_bda3_74c8508ad6f7
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_462a3588_ce61_4b9e_8331_ecabe0248fda
type: Reaction
fast: false
notes: GPR_ASSOCIATION: (RSP_3968 and RSP_3967 and RSP_3966 and RSP_3964) or (RSP_3968 and RSP_3967 and RSP_3966 and RSP_3965) or (RSP_3297 and RSP_3294 and RSP_3293 and RSP_3295) or (RSP_3297 and RSP_3294 and RSP_3293 and RSP_3296) or (RSP_2923 and RSP_2926 and RSP_2927 and RSP_2925) or (RSP_2923 and RSP_2926 and RSP_2927 and RSP_2924) or (RSP_2275 and RSP_2277 and RSP_2276 and RSP_2274) or (RSP_2275 and RSP_2277 and RSP_2276 and RSP_2278) or (RSP_1290 and RSP_1291 and RSP_1289 and RSP_1287) or (RSP_1290 and RSP_1291 and RSP_1289 and RSP_1288) or (RSP_0301 and RSP_0300 and RSP_0299 and RSP_0297) or (RSP_0301 and RSP_0300 and RSP_0299 and RSP_0298) GENE_LIST: RSP_3968; RSP_3967; RSP_3966; RSP_3964; RSP_3968; RSP_3967; RSP_3966; RSP_3965; RSP_3297; RSP_3294; RSP_3293; RSP_3295; RSP_3297; RSP_3294; RSP_3293; RSP_3296; RSP_2923; RSP_2926; RSP_2927; RSP_2925; RSP_2923; RSP_2926; RSP_2927; RSP_2924; RSP_2275; RSP_2277; RSP_2276; RSP_2274; RSP_2275; RSP_2277; RSP_2276; RSP_2278; RSP_1290; RSP_1291; RSP_1289; RSP_1287; RSP_1290; RSP_1291; RSP_1289; RSP_1288; RSP_0301; RSP_0300; RSP_0299; RSP_0297; RSP_0301; RSP_0300; RSP_0299; RSP_0298; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + L-valine[p] <=> ADP + H+ + Orthophosphate + L-valine Confidence Level: 2
name: ABC L-valine transporter
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#d715a518_8d47_445e_a085_9d05b5334f75
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fa5d374a_8c1c_4958_b281_f84d40060cc4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Chlorophyllidea
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_07f6c65f_342e_47a1_994d_582c4a35e7fd
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0a9d0e7c_a2a3_42f9_9109_13fe12ef1d48
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a56a3413_a970_42e3_b64b_9446045251da
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Alanine[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_4c82f015_edbb_4bd3_a4f6_e64aae535119
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1151cb90_97f1_451c_ac87_5bbda8195e9b
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ff0602c9_b84f_4753_81d6_5849d5520376
stoichiometry: 1.0
type: SpeciesReference

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type: Reaction
fast: false
notes: GPR_ASSOCIATION: RSP_1836 or RSP_2786 or RSP_2342 GENE_LIST: RSP_1836; RSP_2786; RSP_2342; SUBSYSTEM: Purine metabolism Equation: GMP + Diphosphate <=> Guanine + 5-Phospho-alpha-D-ribose 1-diphosphate Confidence Level: 2
reversible: true
name: adenine phosphoribosyltransferase

http://identifiers.org/biomodels.db/MODEL1304240000#_698f36a0_c71c_4c52_b4e2_3c83f145f632
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Guanosine[e] <=> Confidence Level:
fast: false
reversible: false
name: Guanosine exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_2ad46baf_b978_4c5a_8074_5285f92f3c29
value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_45bb8daa_dcb3_4423_bee3_1bcc612ca9b0
value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9c85b647_31f5_4346_a0c3_bda43415224c
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e1660735_9c2a_4622_90cc_90620d496c93
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_994fae0b_9007_4cd8_992c_a674615aa1a0
stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8a29f885_68a8_408c_b9b6_6b16714d0dc2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Oxidizedferredoxin
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#c15f0b86_65e3_4e66_ac8b_ec798bb58c45
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bf7c524f_9d05_4cb5_a2c4_55e89cf280aa
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2191747f_240a_4bcb_869b_8dadae760f24
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ad40dcfc_06cd_4828_b50d_994403b2c565
name: 3-demethylubiquinone-9 3-methyltransferase
notes: GPR_ASSOCIATION: RSP_1175 GENE_LIST: RSP_1175; SUBSYSTEM: Ubiquinone and other terpenoid-quinone biosynthesis Equation: 2-Octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone + S-Adenosyl-L-methionine <=> Ubiquinone + S-Adenosyl-L-homocysteine Confidence Level: 2
reversible: true
fast: false
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#b2a8ec16_b05d_4cff_bbcc_7ae8fedf844a
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Iditol
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_509aad90_d60c_4d69_82fd_0d495fa7ab5a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_631399c9_78d1_41eb_91a3_a4886fc34d64
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: tRNA(Met)
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#c91f7cab_f726_4f37_a6d2_c778f38c2018
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3fdf5dd1_9aea_4a17_a088_9fc799ec7bb4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_32c7f0ce_9efb_401d_a0ea_a4b6fae4d865
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Carboxy-2,5-dihydro-5-oxofuran-2-acetate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#aff72d70_fc88_470c_b7fe_724f4e0f5b26
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_16aeccfe_68f2_4ee5_8ff7_f31e68e7239f
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: 2',3'-Cyclic GMP[e] <=> 2',3'-Cyclic GMP[p] Confidence Level: 2
fast: false
reversible: true
name: 2',3'-Cyclic GMP transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#edc99589_e307_462c_b862_7eb99c2ec78d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ce66cbfb_b32d_4fa7_a490_cbeb81bd0172
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2462c080_a5ba_432c_91b4_e5a1c8407d9f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c7e5e21c_6bd2_4e65_8ee6_a475d1d62c06
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c8574c79_803e_4237_9f3a_d31e785493f6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 4-Amino-4-deoxychorismate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#ef33f1be_20e0_4998_bd01_b1ce69b7c949
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7aec7f56_053a_4d7a_8ff0_9c30411ba020
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c70ad27e_d352_426a_acbd_0fcc38885422
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#aa164116_806f_46f0_a8df_6067fc36c962
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Altronate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_4bb70cbf_cf50_4fb3_ac7c_b9317317ffff
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_577e1655_262c_4752_bf8a_4132037d5e3e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8cec7a84_d87b_476f_8db9_218ea1544f58
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7f6e30d0_b92a_44c3_98cf_0d1d13d9c7fc
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_515996db_f23d_4a45_ac94_dfed2f41cf30
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_93bfd655_8fe9_48b1_9e0e_432e312e054d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a9302767_96ca_4c06_ba16_fc8952064524
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5afd6ef8_fa6c_40f0_a2ae_463376c7e9f2
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1579d4ab_49c1_4711_b98c_0330bd6682ad
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Galactarate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#dd689361_98e7_46a4_b245_a557644240cf
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#cf3840e6_c9a0_49aa_baa8_6a16bce499c9
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Methylbut-2-enoyl-CoA
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b132c4ec_48c2_47f7_8854_9aa9aadcd2fd
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Mannose[e] <=> Mannose[p] Confidence Level: 2
fast: false
reversible: true
name: Mannose transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_5f9a7b97_246c_44e9_982b_b6f462fdbd55
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ab24c047_049d_4167_a29b_c648cd6d69e4
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_034a8611_c1df_4ed7_9523_f3bf744cec95
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2560611c_1520_4ca8_956c_83bb195fdc0d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f5939a09_8c15_4852_afc5_9b23b4de8b3f
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Fumarate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_3b38633b_9be2_4c31_98a0_abad740c6865
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Ribulose1,5-bisphosphate
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b1197865_5540_4958_8718_95581838b2c0
value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 4.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c6644877_e522_45bb_b197_ecbf77d3efc2
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6c089062_1518_432c_b4fa_3ba2a66ca495
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_54ef1066_0535_4a8e_a149_c011b117db69
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c98c68ec_7e88_44c5_be27_817ade0016ac
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_06bcd94f_8757_464c_8ccf_aa28c0010681
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5ab8afe0_4e01_441f_95b9_334330fff3b5
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c74aceb8_d28b_4f6d_bc2c_03316a6df89f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_48276568_fc34_43a2_b1ed_052e9a176558
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#cd63c921_5fc8_4faf_bf12_819173364c3c
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Methionine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_5c74df3b_7b63_426d_a780_02fe65381d8e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bd5f0291_1425_4b77_9b77_1217d7eff884
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_88ba217e_a9dd_46c0_a767_74e44b7bed3f
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#eee01181_5b94_4e09_ad6d_204f96fbc90f
fast: false
reversible: true
notes: GPR_ASSOCIATION: RSP_1351 GENE_LIST: RSP_1351; SUBSYSTEM: Glycine, serine and threonine metabolism Equation: O-Phospho-4-hydroxy-L-threonine + 2-Oxoglutarate <=> 2-Oxo-3-hydroxy-4-phosphobutanoate + L-Glutamate Confidence Level: 2
name: phosphoserine aminotransferase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_288f21cd_ae9d_4852_9f3f_da934847f9c3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_812d8112_5fe5_4eb5_b88e_14d1a946f3ae
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e48c881d_f04f_4ff6_85fd_abf58949b05a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1dfa4a3d_998d_4c6d_8604_fd51ba46e628
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f18c7e88_aa1c_4dd3_8d88_58b1ad44d3d4
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9b592e71_b51d_4462_bf3f_09633e7296e1
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: D-Galactarate[p] + H+[p] <=> D-Galactarate + H+ Confidence Level: 1
name: D-Galactarate transport via proton symport
type: Reaction
reversible: true
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#d70afe78_250d_4b99_a9f5_798bab17575a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_80b83648_2e7c_49b5_b213_7966d5b46b60
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8114616d_cecf_47c2_a87b_f35d165f8de2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f6dd885b_5011_4db8_a82b_1967b775688f
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ab96539e_70f3_489d_a2a8_2ab269116057
name: putative nucleotide di-P-sugar epimerase or dehydratase
type: Reaction
reversible: true
notes: GPR_ASSOCIATION: RSP_4108 GENE_LIST: RSP_4108; SUBSYSTEM: Fructose and mannose metabolism Equation: GDP-L-fucose + NADP+ <=> GDP-4-dehydro-6-deoxy-D-mannose + NADPH + Confidence Level: 2
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_83fb5e15_c2c1_4449_b90b_6fcdb3e00449
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3c02d414_3d6f_4a87_bfa8_7fb9edf469d6
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fcff08e4_6aa9_4554_b6a2_02678fb000d1
notes: GPR_ASSOCIATION: RSP_2196 GENE_LIST: RSP_2196; SUBSYSTEM: Fatty acid metabolism Equation: (2E)-5-Methylhexa-2,4-dienoyl-CoA + H2O <=> 3-Hydroxy-5-methylhex-4-enoyl-CoA Confidence Level: 2
fast: false
reversible: true
name: enoyl-CoA hydratase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#ad4a4047_8f20_461c_b38e_df3dfa73808a
stoichiometry: 2.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8e179d73_e1ae_4fe8_92dc_26f5b991100b
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1208ab85_889c_45a6_a2e8_049f8e5651de
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6047ce42_3e3d_4a08_bc78_dca5a20ab957
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_668354c0_2779_48d8_94c5_312c6b992dff
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_408ffad9_be2a_456d_a08e_e3c09affd2e2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_98960c20_244b_4217_b7ee_a5c2047ca8b6
reversible: true
notes: GPR_ASSOCIATION: RSP_3185 GENE_LIST: RSP_3185; SUBSYSTEM: Porphyrin and chlorophyll metabolism Equation: Hydrogenobyrinate + 2 L-Glutamine + 2 ATP + 2 H2O <=> Hydrogenobyrinate a,c diamide + 2 Orthophosphate + 2 L-Glutamate + 2 ADP + H+ Confidence Level: 3
type: Reaction
name: cobyrinic acid a,c-diamide synthase
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_91c89df6_8e53_414d_837c_3abcbec7ad0b
value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_329dc9ce_619d_40b0_93c7_27768a536ce7
stoichiometry: 1.0
type: SpeciesReference

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fast: false
type: Reaction
notes: GPR_ASSOCIATION: RSP_2914 GENE_LIST: RSP_2914; SUBSYSTEM: Nicotinate and nicotinamide metabolism Equation: N-Ribosylnicotinamide + H2O <=> Nicotinamide + D-Ribose Confidence Level: 2
reversible: true
name: nucleoside hydrolase

http://identifiers.org/biomodels.db/MODEL1304240000#c99dfad6_fd77_4770_b969_b9d3936d025a
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (3R)-3-Hydroxyacyl-CoA
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_528ba332_642f_4b0d_b23c_f9435600c3e2
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_988b5aae_bb06_45b2_9914_12a0f2ea7b69
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c7c8fc60_12a7_4fb0_b4f2_b1703205ca9b
stoichiometry: 5.9E-5
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_0284 GENE_LIST: RSP_0284; SUBSYSTEM: Porphyrin and chlorophyll metabolism Equation: 3-Vinylbacteriochlorophyllide a + H2O <=> 3-Hydroxyethylbacteriochlorophyllide a Confidence Level: 2
fast: false
reversible: false
name: 2-vinyl bacteriochlorophyllide hydratase
type: Reaction

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_63e1c1b4_4b9b_493f_8987_37eb56d0a0ee
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_294b1294_61af_4d4f_bea1_2782d4981613
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2b92a9e4_4ce8_449d_8b44_737a4e6fa0ea
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_83866adc_8196_4c63_9892_b9c0527744a7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6313d479_9e01_406f_8e94_de3303358767
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_506c8f17_8729_41d4_9d82_5269ca076adc
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3068239a_ed4b_42d6_b3ba_0c228421d286
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c3f25ad6_c376_4bc4_a188_bcd64f408b5a
fast: false
notes: GPR_ASSOCIATION: RSP_3176 or RSP_2344 or RSP_1256 GENE_LIST: RSP_3176; RSP_2344; RSP_1256; SUBSYSTEM: Fatty acid biosynthesis Equation: But-2-enoyl-[acyl-carrier protein] + NADH + H+ <=> Butyryl-[acp] + NAD+ Confidence Level: 4
type: Reaction
name: enoyl-[acyl-carrier-protein] reductase [NADH]
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#_8ade2d5d_26c6_4fb2_a6ed_50873cb15704
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#defbb9a8_e232_40e3_b52c_7fa4b962a3ed
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Nitrogen[e] <=> Nitrogen[p] Confidence Level: 2
fast: false
reversible: true
name: Nitrogen transport via diffusion
type: Reaction

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Oxostearoyl-[acp]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_7b19037d_de71_4530_ab41_6e9ea95894a9
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: 2',3'-Cyclic AMP[e] <=> 2',3'-Cyclic AMP[p] Confidence Level: 2
fast: false
reversible: true
name: 2',3'-Cyclic AMP transport via diffusion
type: Reaction

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Threonine
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Ala-Glu[p]
type: Species

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Agmatine[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#d979714d_1e5f_4118_b2ca_4cb17edba084
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2,5-Diamino-6-(5'-triphosphoryl-3',4'-trihydroxy-2'-oxopentyl)-
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#c8613bc9_421d_4a66_8e6b_369c92ebbdf2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (S)-3-Hydroxy-3-methylglutaryl-CoA
type: Species

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: FAD
type: Species

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_32bbe80e_f552_4402_83d0_142763e01c41
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2aa9e153_9c91_4599_8058_985cf5291f86
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2cb62aae_c713_4f0d_af20_50ffb823c485
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#add9a282_9725_4d25_af3a_225acfe0c2fb
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6feae0a5_df54_4c4a_8850_70638dbe503f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a8476b2a_379a_4010_90df_0120ffecc9fe
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4616cd0b_53d4_4836_b959_abbe0a138ac6
stoichiometry: 2.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Citrate
type: Species

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c3c0348d_184b_4b1e_b5ca_22d4872a93fe
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_071bde5b_eeb2_4eca_9e27_3bce10b08662
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e1087b01_93f0_4df2_a371_e18a4056deb6
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1e3d190a_ad9e_4172_abe7_9659b70191da
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_987b0b50_2843_4b8f_ac2b_a99e48c628d3
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2f172aa1_65a2_43f6_a5ac_f628926b702e
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fa96094a_b6a0_4d2c_aa21_c7e866bfbd0b
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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type: Reaction
reversible: false
name: 5-nucleotidase
notes: GPR_ASSOCIATION: RSP_0955 or RSP_2545 GENE_LIST: RSP_0955; RSP_2545; SUBSYSTEM: Pyrimidine metabolism Equation: CMP + H2O <=> Cytidine + Orthophosphate Confidence Level: 2
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_6a082c66_a391_46dc_9fb9_f9e8cfe8e73f
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Asparagine
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9d2f667d_47a4_41e1_beba_830ae31d8032
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_97c10221_dc00_4700_ae84_69af36ed8e83
value: -1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a716543b_0fcf_453a_b30b_17d845e51ca5
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bc6c8425_d756_4097_a515_2d60d5d87b40
notes: GPR_ASSOCIATION: RSP_0265 or RSP_1135 GENE_LIST: RSP_0265; RSP_1135; SUBSYSTEM: Carotenoid biosynthesis Equation: trans,trans-Farnesyl diphosphate + Isopentenyl diphosphate <=> Diphosphate + Geranylgeranyl diphosphate Confidence Level: 4
type: Reaction
fast: false
name: farnesyl-diphosphate synthase
reversible: false

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#cf223060_28f8_43fa_953a_fcb12e5d381e
value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1ccda78a_1541_40a8_ace7_43af79dbd663
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 0.29010880158789
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fb3a9a8f_fddb_4e4b_b377_ebeda073a4c9
notes: GPR_ASSOCIATION: RSP_2914 GENE_LIST: RSP_2914; SUBSYSTEM: Purine metabolism Equation: Xanthosine + H2O <=> Xanthine + D-Ribose Confidence Level: 2
reversible: true
name: nucleoside hydrolase
type: Reaction
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_789e5c92_8710_49b6_bfc9_48082edafcce
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_34243805_08cc_403c_b6b7_9bcc5d5ad5d8
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Methanol[e]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2fb1b6d8_e03f_4f2e_b05a_24feb15be953
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f07bc900_770d_4060_a395_7a621dd4b0f1
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_02533480_91b6_44f1_8fd0_bc7ddbd1fabd
value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ec9e2b61_3db7_4a8d_a642_8b5232f39412
value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: D-Proline[e] <=> D-Proline[p] Confidence Level: 2
fast: false
reversible: true
name: D-Proline transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#dfd4a778_fbba_4ee9_ac14_5e3feb41bffd
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_91da8b92_fae0_4a8d_a64d_d7bbba5b5e2e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c5dc0d07_aef9_4ae7_bce7_6fee73b8e72d
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Orthophosphate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_5a55a487_4565_4d1e_a6ae_3491728e6df5
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a2a63490_b78d_475f_b02c_aae813f3d4e6
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#cb4aa9c8_f832_458b_9bc6_8cdb9de6b9ef
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_73941297_aee2_44c2_ae4f_7e4ebb4f0cc2
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_92c5e621_5e42_4492_bb1c_c7123be62fa3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_885db9fb_d08c_4faa_b4bc_404c33da5c02
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c99a45d5_3d43_4364_88d0_857cc45519d5
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Pyridoxine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_4b3465e3_8e3e_4c80_bd65_ea2643a42aae
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_33629ee4_125c_4a0d_8ebd_f20fae83068c
name: 3-oxoacyl-[acyl-carrier-protein] synthase I
notes: GPR_ASSOCIATION: RSP_3177 or RSP_3468 or RSP_2464 GENE_LIST: RSP_3177; RSP_3468; RSP_2464; SUBSYSTEM: Fatty acid biosynthesis Equation: Tetradecanoyl-[acp] + Malonyl-[acyl-carrier protein] <=> 3-Oxohexadecanoyl-[acp] + CO2 + Acyl-carrier protein Confidence Level: 2
fast: false
reversible: true
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_893b8ccc_1e92_4614_b0f5_6e76b10eb17f
stoichiometry: 0.562158734565962
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5f84e8c7_5f02_49ee_99a0_faf17a83ef52
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b77a2f52_131b_493b_a433_e73666e5b20e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ab85cffc_a3f1_4441_9629_f34298d8c270
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_82de1393_7e45_444e_8ccd_1982c4bd27bb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2605f575_eceb_4486_be6b_a5c003051aca
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1229eac9_a762_478f_9605_9f8db1fe07e1
reversible: true
notes: GPR_ASSOCIATION: RSP_2428 GENE_LIST: RSP_2428; SUBSYSTEM: Riboflavin metabolism Equation: Nicotinate D-ribonucleotide + Dimethylbenzimidazole <=> Nicotinate + N1-(5-Phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole + H+ Confidence Level: 2
type: Reaction
name: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_8c38b802_6463_495d_8484_14521d10e037
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_21e1a1d1_fd20_48ec_948b_17cfe4f749f7
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: thiamine[e] <=> thiamine[p] Confidence Level: 2
fast: false
reversible: true
name: thiamine transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_113c1689_4621_47a8_ada8_1744ae1b9fd0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b75bfce1_9e12_4d0b_81d6_985439441e90
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ac818775_ca4a_4061_a3f1_74f0ca40663b
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a190a3e2_44a5_4883_993b_72ae1644ef5a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_012e006f_dffa_43b2_8b20_358fbcf99ee6
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9a3b4aca_3c63_4498_9cb9_9887e23ec3a0
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_12129376_a7e2_4006_89e3_76014b6ecc59
stoichiometry: 0.0612705465487423
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_637b3ab1_f7ed_4f5f_952a_34a14790bbc7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5f5ee9c5_ff98_4dde_93a6_47c898b4c460
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bd87dff7_760f_4ee5_aac8_8cce9b5ec54f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2610b7ab_5c46_42fc_8ce7_c8dfc9df787e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_6310058a_4fd9_4901_b2c6_d9d81d34a3e1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9b7411ff_80e0_4782_85ca_cc4bbdbec294
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d5a72ccb_3bb9_4a80_a95a_b55eafe4502e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d12ecbc0_8aa0_4dc9_a8f0_e8bd96af9807
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_80522bee_c185_41c1_bb98_8023a2bb5769
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#dfdf4d0f_8871_4318_83ba_cf0b9ff59a2f
fast: false
type: Reaction
name: enoyl-[acyl-carrier-protein] reductase [NADH]
notes: GPR_ASSOCIATION: RSP_3176 or RSP_2344 or RSP_1256 GENE_LIST: RSP_3176; RSP_2344; RSP_1256; SUBSYSTEM: Fatty acid biosynthesis Equation: trans-Oct-2-enoyl-[acp] + NADH + H+ <=> Octanoyl-[acp] + NAD+ Confidence Level: 4
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#_925e2572_71f6_43d4_9ae6_f8d07f6d3ac8
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8a7c7647_a380_4805_b238_0963f1b21a32
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2d96b661_8dde_4eff_8b42_abff3c27e8db
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_62ba0273_bbea_4cfa_8a34_b722cb69c895
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7b6070e9_1d05_4904_9f9d_6230473c253f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_33b171da_c07b_4ba2_8bf6_203297542dd7
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_08db366d_c9bd_47c7_81d4_6dec3b55c442
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9859ca5f_5d72_4150_9d13_96776a1ebff3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fadb8f3b_831d_45c9_9eac_39eb6efb6e74
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_48b5a77b_d0b8_42d6_97b6_0ccaa2cd564a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_564d9146_be3d_4f0c_b1b9_7eb88b012797
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Phosphonoacetate[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#d879b65a_2c14_4b13_ade4_86df1cd2bbcc
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c3577730_d995_46ae_89a4_21818698c992
reversible: false
notes: GPR_ASSOCIATION: (RSP_3337 and RSP_3335 and RSP_3336 and RSP_3338) or (RSP_0016 and RSP_0017 and RSP_0015 and RSP_0161) or (RSP_2158 and RSP_2156 and RSP_2157 and RSP_2159) or (RSP_3038 and RSP_3039 and RSP_3040 and RSP_3041) GENE_LIST: RSP_3337; RSP_3335; RSP_3336; RSP_3338; RSP_0016; RSP_0017; RSP_0015; RSP_0161; RSP_2158; RSP_2156; RSP_2157; RSP_2159; RSP_3038; RSP_3039; RSP_3040; RSP_3041; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + spermidine[p] <=> ADP + H+ + Orthophosphate + spermidine Confidence Level: 2
name: ABC spermidine transporter
fast: false
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_83a92212_09e8_4e86_81a7_f0b239a648ea
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d1de3be2_67d8_456e_81cf_2f27de15d5e0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e203f95e_ecc7_4caa_98c6_a0b032ca04c9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c5b1fe17_5809_4e88_8922_2141ff31f718
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Cobinamide
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_21884aef_7059_4e7b_9a8d_87fa8cf5cb84
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8e9f425b_ad15_400e_9f89_9c9337777be8
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a187179a_fdce_4335_823b_11cd337e186d
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (3R)-3-Hydroxydecanoyl-[acyl-carrierprotein]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#ae11db8c_0228_4c09_bd81_063e167323a5
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: 3'-UMP[e] <=> 3'-UMP[p] Confidence Level: 2
fast: false
reversible: true
name: 3'-UMP transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_15ec1d1f_dfec_48ca_b09e_12a09a6decca
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c756d7df_f72a_479b_80f1_404049ff728c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3ab0802a_d41e_45a3_87d7_b8b4bb508c9a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b3ca8f5f_ae7e_4b38_805c_c48ea0f142a2
type: Reaction
reversible: false
fast: false
notes: GPR_ASSOCIATION: RSP_2307 GENE_LIST: RSP_2307; SUBSYSTEM: Oxidative phosphorylation Equation: Diphosphate + H2O <=> 2 Orthophosphate + H+ Confidence Level: 2
name: putative manganese-dependent inorganic pyrophosphatase

http://identifiers.org/biomodels.db/MODEL1304240000#e5ccd8e5_1e5d_4d2d_a07d_4410d819a39a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f68e47af_826b_4133_93aa_7dad991c5908
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Sodium[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#aad81975_fc79_4e6e_80b7_5d2fc165da64
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f04633f8_ea23_421b_bd73_bc76cc31581e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8140a496_9d0c_4cc5_97c9_c51787426d1a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c2816a00_f587_4ffe_a50a_85ae842eb577
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4aa60384_6fd4_4c5f_9b1d_237ed98e2922
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f8079266_165c_4d63_8fcb_012a9f24d258
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5ccca12e_6848_4245_bea2_c4aab5fc55c0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e8fcb29d_217e_4130_b38a_8401e27c19b6
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c96232b1_5db7_4674_ac04_e3a5c35bd7b2
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d98d12e0_d457_4e18_b03e_4721b22ac816
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Inosine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b7a2582e_abc3_4029_987c_506aaa370c41
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_27cb45ea_532f_4a48_893a_c8f29d240d8a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b3a14bce_a632_48f2_be99_1c7be16cd536
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_90e257db_9d32_4879_82a9_b8a301ae750e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a0a9d90d_0bc6_46bf_99e8_53d1893e3e19
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_73aeab46_c77d_40de_b78b_247acf896b00
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_19a8858d_a813_49bb_bf0e_9dffad89ee6b
name: formyltetrahydrofolate deformylase
notes: GPR_ASSOCIATION: RSP_0944 GENE_LIST: RSP_0944; SUBSYSTEM: Folate biosynthesis Equation: 10-Formyltetrahydrofolate + H2O <=> Formate + Tetrahydrofolate Confidence Level: 2
fast: false
type: Reaction
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#_1f37ffc2_7b62_45ef_b1e9_3ea0551a98c1
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_86810f94_1c3d_4b83_8ad5_ec71ac86029d
type: Reaction
name: 3-Hydroxypropanoate transport via proton symport
fast: false
reversible: true
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: 3-Hydroxypropanoate[p] + H+[p] <=> 3-Hydroxypropanoate + H+ Confidence Level: 1

http://identifiers.org/biomodels.db/MODEL1304240000#_9757adf7_6e81_4501_94a6_8773271a9bf7
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_52a06a61_4b13_4cd4_8c42_0091286b88f7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f7825c11_fe0e_43a5_98ac_f9f32e8e9e68
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5cc86565_b0a6_490f_8272_51d356e71fbb
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d14ae8a7_8008_463a_b48a_7d9e23360e74
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_40bebe3a_2ba7_463c_92ad_a9f7d09bce34
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2641f3f1_333c_4c78_8cc7_b4ed54a03c7a
notes: GPR_ASSOCIATION: RSP_1756 GENE_LIST: RSP_1756; SUBSYSTEM: Pantothenate and CoA biosynthesis Equation: 3-Methyl-2-oxobutanoic acid + Formaldehyde <=> 2-Dehydropantoate Confidence Level: 2
fast: false
reversible: false
name: 3-methyl-2-oxobutanoate hydroxymethyltransferase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_149e0321_be95_4d0a_8053_0928bbc1cf70
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_14cdaf94_dfe6_41f8_b17a_0dac7780a078
type: Reaction
reversible: true
notes: GPR_ASSOCIATION: RSP_3535 or RSP_2196 GENE_LIST: RSP_3535; RSP_2196; SUBSYSTEM: Fatty acid metabolism Equation: (S)-3-Hydroxydodecanoyl-CoA + NAD+ <=> 3-Oxododecanoyl-CoA + NADH + H+ Confidence Level: 2
fast: false
name: 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase

http://identifiers.org/biomodels.db/MODEL1304240000#_1a98672a_70af_4492_b918_bd9fc0b184da
notes: GPR_ASSOCIATION: RSP_1447 or RSP_2502 GENE_LIST: RSP_1447; RSP_2502; SUBSYSTEM: Amino sugar and nucleotide sugar metabolism Equation: L-Glutamine + D-Fructose 6-phosphate <=> L-Glutamate + D-Glucosamine 6-phosphate Confidence Level: 2
type: Reaction
name: glucosamine--fructose-6-phosphate aminotransferase
reversible: true
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_58dd32e0_ca9f_424f_9984_9bd25190fab9
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f859f398_f523_4146_971d_a4141e50c454
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a5b35737_171e_4388_8933_c2508b02ae9c
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Protoporphyrin
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_84380af3_890a_49cb_bc0d_80b6c90db69d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b42252be_a07c_47c7_8d2d_023d28fa8274
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Poly-beta-hydroxybutyrate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_460fbf36_e261_403e_8179_68fa3bf7449d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bdf6581c_8208_480a_85f9_d93d987f88b7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_29f7a0b0_6cf7_4baf_9f69_8aa4aba0eb63
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#de77f820_2f18_42ef_a339_1c5ea2d052f7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_56bb5123_0674_47d0_abdc_018319fe6b81
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e7ed40ad_0325_4922_9125_e0b2575bea9b
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Glucose[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#a4ce9689_a0bf_4da3_9298_62acd6a1df45
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_949599ad_ebc6_44c6_a56e_4cd2ed533406
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c2b22d89_0ea2_4ad9_a052_5914b2412641
stoichiometry: 2.0
type: SpeciesReference

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d8975dfc_83f3_4713_ac15_3e0323a5593b
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Taurine[e] <=> Taurine[p] Confidence Level: 2
fast: false
reversible: true
name: Taurine transport via diffusion
type: Reaction

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Gluconicacid[p]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 2-Methyl-3-oxopropanoate
type: Species

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value: 0.0
type: LocalParameter

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reversible: false
notes: GPR_ASSOCIATION: RSP_2707 GENE_LIST: RSP_2707; SUBSYSTEM: Terpenoid backbone biosynthesis Equation: trans,trans-Farnesyl diphosphate + Isopentenyl diphosphate + H+ <=> trans,trans,cis-Geranylgeranyl diphosphate + Diphosphate Confidence Level: 2
fast: false
name: undecaprenyl pyrophosphate synthetase
type: Reaction

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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type: Reaction
reversible: false
fast: false

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reversible: true
type: Reaction
notes: GPR_ASSOCIATION: RSP_0187 GENE_LIST: RSP_0187; SUBSYSTEM: Pyrimidine metabolism Equation: 5,6-Dihydrothymine + NADP+ <=> Thymine + NADPH + H+ Confidence Level: 2
name: dihydropyrimidine dehydrogenase

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type: SpeciesReference

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type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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type: SpeciesReference

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type: LocalParameter

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notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + D-Methionine[p] <=> ADP + H+ + Orthophosphate + D-Methionine Confidence Level: 2
name: D-Methionine ABC transporter
type: Reaction

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stoichiometry: 1.0
type: SpeciesReference

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type: LocalParameter

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type: SpeciesReference

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type: LocalParameter

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type: SpeciesReference

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type: SpeciesReference

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name: D-alanine--D-alanine ligase
reversible: true
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fast: false

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value: -1000.0
type: LocalParameter

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type: LocalParameter

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initial concentration: NaN
initial amount: NaN
name: (11E)-Octadecenoly-[acyl-carrierprotein]
type: Species

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type: LocalParameter

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value: -1000.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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initial amount: NaN
name: Hypotaurine
type: Species

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value: -1000.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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type: SpeciesReference

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initial amount: NaN
name: 4-Aminobutyraldehyde[e]
type: Species

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type: LocalParameter

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value: -1000.0
type: LocalParameter

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type: SpeciesReference

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type: LocalParameter

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type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

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type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: meso-Tartaric acid[e] <=> meso-Tartaric acid[p] Confidence Level: 2
fast: false
reversible: true
name: meso-Tartaric acid transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_0e3241aa_0b62_419e_bcde_f0594c1ec239
notes: GPR_ASSOCIATION: RSP_0488 GENE_LIST: RSP_0488; SUBSYSTEM: Pentose and glucuronate interconversions Equation: D-Glucuronate <=> D-Fructuronate Confidence Level: 2
fast: false
reversible: true
name: glucuronate isomerase
type: Reaction

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type: SpeciesReference

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type: LocalParameter

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name: (S,S)-Tartaric acid[e]
type: Species

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initial concentration: NaN
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name: NH3[e]
type: Species

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name: Tetradecanoyl-CoA
type: Species

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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name: Adenylylsulfate
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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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initial amount: NaN
name: Hexadecenoyl-[acyl-carrierprotein]
type: Species

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type: LocalParameter

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type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b474e41b_9ee4_4f50_add7_fa0e5962703b
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type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
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type: Species

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value: 1000.0
type: LocalParameter

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type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Met-Ala[e]
type: Species

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type: SpeciesReference

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type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b487a246_b46e_4948_a1fa_a4c43fd00194
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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Selenide[e]
type: Species

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_69829f32_c2bf_4571_8e05_7c767df2fa92
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2d91d059_d412_49bc_864d_f0e3c48b90cf
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_24c2daec_16de_439f_b472_8fb888f0d037
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9c028060_787a_47a1_afc9_e53c9d857137
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type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#db38fd24_bdca_455f_8129_e795dd54f475
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http://identifiers.org/biomodels.db/MODEL1304240000#_6679a097_a4bf_427e_9234_258e92d3be6d
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type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_41ea2631_1797_4ea4_81db_5e86c1e3ad49
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6dc0d4f3_f8f9_4c61_a0be_25f391bf98d2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_6b55d749_156a_46e7_9ce9_bb8c4f95e76d
stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_81e7488d_5ced_47a0_9131_2f19327ba30d
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type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_870b1f27_157f_400e_b4dc_4e0cde042383
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http://identifiers.org/biomodels.db/MODEL1304240000#_5b859947_248b_4b1a_95ac_bab1e3d57414
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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b748e310_3442_4fa3_a21b_abe3fba54e8a
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_755da410_519d_46fa_8b92_31fee4761729
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_839205c1_1f70_4f44_ab99_0bacbc604b6a
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type: LocalParameter

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constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: sulfate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#c6e44a65_ee64_4990_bd7b_924977728a68
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c38764d0_fdb5_4e45_a054_6aa54a0707c0
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b94768bc_961c_4c35_9809_0f5788d7e1b4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ea4c0546_530f_407c_96f5_0d5b337fe1dc
name: Uridine ribohydrolase
type: Reaction
notes: GPR_ASSOCIATION: RSP_2914 GENE_LIST: RSP_2914; SUBSYSTEM: Pyrimidine metabolism Equation: Uridine + H2O <=> Uracil + D-Ribose Confidence Level: 2
fast: false
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#_89112af7_b417_4407_b3d8_ce0ecaccdbd3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3dbc10b8_bdbd_4653_9639_1df19668e9ab
stoichiometry: 0.024071
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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fast: false
name: indole-3-glycerol-phosphate synthase
notes: GPR_ASSOCIATION: RSP_6214 GENE_LIST: RSP_6214; SUBSYSTEM: Phenylalanine, tyrosine and tryptophan biosynthesis Equation: 1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate + H+<=> Indoleglycerol phosphate + CO2 + H2O Confidence Level: 2
type: Reaction
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#_1d23b857_ca74_44e8_b4ed_6897b8d1e5a0
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notes: GPR_ASSOCIATION: RSP_0735 or RSP_3827 GENE_LIST: RSP_0735; RSP_3827; SUBSYSTEM: Glycerophospholipid metabolism Equation: Phosphatidate + CoA <=> 1-Acyl-sn-glycerol 3-phosphate + Acyl-CoA Confidence Level: 2
name: phospholipid/glycerol acyltransferase
fast: false
type: Reaction

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value: 1000.0
type: LocalParameter

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type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9ef61daa_a30f_44ab_8ce0_ffab20d4b2ea
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type: SpeciesReference

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type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_83818c2c_8bd3_4490_92c1_05ffb797a704
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type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_957f5493_0fb5_4824_ab0d_fc549ab2fa03
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type: SpeciesReference

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type: SpeciesReference

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type: Reaction
reversible: true
name: phytoene dehydrogenase
notes: GPR_ASSOCIATION: RSP_0271 GENE_LIST: RSP_0271; SUBSYSTEM: Carotenoid biosynthesis Equation: Neurosporene + NAD+ <=> Lycopene + NADH + H+ Confidence Level: 4
fast: false

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value: -1000.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 0.144502841748517
type: SpeciesReference

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type: SpeciesReference

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Arabinose[e]
type: Species

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type: SpeciesReference

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stoichiometry: 1.0
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type: SpeciesReference

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stoichiometry: 14.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Sulfopyruvate[e]
type: Species

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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notes: GPR_ASSOCIATION: (RSP_0495 and RSP_0496) GENE_LIST: RSP_0495; RSP_0496; SUBSYSTEM: Hydrogen metabolism Equation: Hydrogen + Oxidized ferredoxin <=> Reduced ferredoxin + 2 H+ Confidence Level: 3
reversible: true
fast: false
type: Reaction
name: hydrogenase

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

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type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Glyceraldehyde
type: Species

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Sulfur
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_35c1b246_ca1e_4b86_bbe2_03ed03db5870
stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1208fc21_d9c6_4485_82fb_9a26e0083a40
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_703e661a_f7c8_4fcd_9852_9de76789fe3d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_01e7d30e_9831_41a2_a79d_1d19bca7bc7c
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: glutamate[e] <=> Confidence Level:
fast: false
reversible: false
name: glutamate exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_9fd8ce43_ab99_47bb_94a6_11e206a3fcbe
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_84612af1_b150_4755_a372_e49a2ef9203e
value: 1000.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_11613803_5ef4_422a_8b04_8cbd7cc9d23d
stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3'-CMP[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_411ccd07_5a0b_41ee_bafc_d11df4338323
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e3f926a0_d3cb_4f2a_9168_9eaf565f2959
notes: GPR_ASSOCIATION: RSP_0897 or RSP_1144 or RSP_3110 or RSP_3111 or RSP_3377 GENE_LIST: RSP_0897; RSP_1144; RSP_3110; RSP_3111; RSP_3377; SUBSYSTEM: Glutathione metabolism Equation: RX + Glutathione <=> Halide + R-S-Glutathione Confidence Level: 2
type: Reaction
name: RX:glutathione R-transferase
fast: false
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#a57128ad_b691_4581_98c7_f2188a333f2c
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_10610e7b_1241_459e_b6c7_3c31136cf58d
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ae220288_bff9_463e_88c8_8ff3dcc45952
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_81b06970_d4bc_41e4_87d7_6f6c3d891d61
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b5cdb190_c4a1_4169_ae5e_8b9d5a3a3cb6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Hydroxymethylbilane
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#e3966598_5152_41d0_a260_b49cd14eaebc
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c163eebb_6487_47ce_b774_670241c45330
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d88f5d21_6e34_491f_ac71_f3c645b9f7f3
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Methanethiol[e] <=> Confidence Level:
fast: false
reversible: false
name: Methanethiol exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_6789fd31_5bdd_45b7_bd4f_02c6ea7d84ad
fast: false
reversible: true
name: Selenide via proton symport
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: Selenide[p] + H+[p] <=> Selenide + H+ Confidence Level: 1
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_23769d85_6135_4574_b9d8_d94bf87f321a
value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_772d263f_38c4_48d4_ae7e_93db7a60c68b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0bcde98f_4a25_4b92_a30e_9ab961fe6d80
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f3d8c48c_0869_4e23_95dd_cfd8899d5424
name: Tetrathionate transport via proton symport
fast: false
type: Reaction
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: Tetrathionate[p] + H+[p] <=> Tetrathionate + H+ Confidence Level: 1
reversible: true

http://identifiers.org/biomodels.db/MODEL1304240000#dfde818b_ae07_437a_8c31_e3f0ae049c2e
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b8e18737_84ca_428b_a569_864e975dd665
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ba5ed456_67d9_474c_859d_cb07c0928ce5
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_538220c8_ad00_4e3a_a6a1_2430e32a7924
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a672c9a8_15ef_49f0_97e8_1247ee8b3321
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_52d544d2_3bb5_49fd_b0a0_bd3c1dd1ab91
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_67dab0be_5c65_4537_932f_881d34177f5d
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: L-glutamine[e] <=> Confidence Level:
fast: false
reversible: false
name: glutamine exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#f7a6fee8_4a8f_4d08_ae24_41fc1568eb48
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ee04e16c_f28a_4f94_8446_bfe4b3dd0fda
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0c416638_ac5e_415c_98cb_c88f2f855a63
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2d7aac24_b539_47c6_978c_44942c5ea855
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Hydrogen[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_2d56ae0c_bd88_462e_b6c9_c0db8edcfad2
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: L-Arginine phosphate[e] <=> Confidence Level:
fast: false
reversible: false
name: L-Arginine phosphate exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_6a0b7bd0_762c_4ad0_aa79_f60a441e6f9d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b95707ba_b30b_40b3_9c26_376316698b07
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3a748cdc_b458_437e_9266_e866727d5a26
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3b149233_ea15_4025_a983_c10f5faf87ff
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_80225da7_4e28_4eb7_8b64_3b0cb3b99109
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#abe9e912_5ded_4d27_8ff4_c1334bded9ec
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Glyoxylate[e] <=> Glyoxylate[p] Confidence Level: 2
fast: false
reversible: true
name: Glyoxylate transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_27490c33_08f0_499a_8e97_71c46c9e731f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_16612a6a_acb4_4eac_8292_2ec43ebc9111
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_74a20508_2653_40e4_a857_6f9c26830395
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5be00a6f_eeee_409a_bd4a_252aef222ec9
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: L-leucine[e] <=> L-leucine[p] Confidence Level: 2
fast: false
reversible: true
name: L-leucine transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_45f73d62_6fc0_4a62_9cc5_e591d53f7d64
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c965b67f_1411_4954_8d69_109f1c36d29b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ddf59d2b_91f2_4d75_a641_d7731e329595
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Sulfopyruvate[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_921dd901_79f8_45c2_9324_3318e89d09c1
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0d12a3a6_9933_4e1d_90dc_7f7fa57d6d0a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7292cf73_a081_41e1_8da4_ec227de2cbde
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e440667f_f839_4628_bba7_86984e287956
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_987805e9_4403_4736_974a_1e3c719ced4a
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (S)-Lactaldehyde[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_255e6e47_bdd5_4809_a8e7_82d69581e65d
stoichiometry: 0.120479068428029
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_734843de_a850_46d4_94fb_6fc6dcf93abe
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#cdbbd063_d456_4e43_95f6_5f6d23ebf6fb
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#acc4f3a4_caf9_4a08_8275_3c6e24983c27
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4ffb8599_ed00_4878_82f8_f43e03db69a1
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a58a32bc_5c7d_4bbb_8939_a82dde2edd5a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a0deb874_b3aa_4e70_a1b8_7a5c9bfb7895
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_18a865a9_5170_44f5_9172_79ae5ae7c452
reversible: false
fast: false
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: beta-Alanine[p] + H+[p] <=> beta-Alanine + H+ Confidence Level: 1
name: Beta-Alanine via proton symport
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#b0b0f894_4998_4824_a620_0ff7d160a67a
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Phenylaceticacid
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#c7c6d5b1_e293_4e82_956a_c9e531c0f593
notes: GPR_ASSOCIATION: RSP_0389 GENE_LIST: RSP_0389; SUBSYSTEM: Folate biosynthesis Equation: Dihydrofolate + NADP+ <=> Folate + NADPH + H+ Confidence Level: 2
reversible: true
name: dihydrofolate reductase
type: Reaction
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_1d63307b_45a9_45fe_ad59_8dda737ffa61
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c92ab299_f522_4e41_8b22_61d06336838c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1c5b48bc_94e1_425e_8b71_58f22940bc0e
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Xylitol[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_1cb195c4_9b32_4bae_ba90_7406edc14548
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_111590fe_0254_4042_8661_537dd0111174
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_096b0bdd_b805_4202_aa43_c4ea7bfad43f
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 5-Dehydro-D-gluconate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_8426f049_9240_4f2b_8c7b_afb493642b97
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e57c5ef6_5b64_492c_a896_99cf98c28dcd
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ae80450d_567f_4665_9341_e775125cf5d8
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_11834dca_268f_472c_baf0_249a447f7d7d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5725b1d9_c20f_45d7_a88b_78dfd804418e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6524c6fc_b090_4f12_8ad0_2772b15ff66f
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (R)-Malate[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#a39a81c2_4371_493d_9719_e4c3311dbdc6
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_50038c63_8869_481c_a956_7d42906b6574
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b2801e74_aafe_4a5c_ba85_8a31a8a06841
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Formate[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#ea9f2103_8ce7_4788_a5d1_f66fc241e3f2
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Oxooctanoyl-CoA
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#ec0af8ed_6ed0_4f1a_9939_0497b94230ad
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_209c12f8_fb48_4a65_bb25_4ffe94562eee
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d9a21336_f3bd_45bb_a75e_5b438b8f754e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fefdeb38_c294_4870_962e_bb611cbcf3fc
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3749ecfd_f8cb_40b9_8c7a_1c7611556185
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: dAMP
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_62bf0871_c868_40e3_9ba7_b927de17cddb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7344b154_6240_4851_80b1_c76c6dd8fff0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8581edbc_a3a7_49d7_b7a5_fa93977fba24
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_781edc5c_4757_4d89_8bc1_51c7354d3ced
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_233a2d67_a96e_4cd5_a9a6_046a581fc4a5
stoichiometry: 2.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_538162a5_fd37_4d3a_9493_301c741fdd2c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ee35d8ce_65c2_4f29_9b9f_d559b1ee77f9
fast: false
reversible: true
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: D-1-Aminopropan-2-ol O-phosphate[p] + H+[p] <=> D-1-Aminopropan-2-ol O-phosphate + H+ Confidence Level: 1
type: Reaction
name: D-1-Aminopropan-2-ol O-phosphate via proton symport

http://identifiers.org/biomodels.db/MODEL1304240000#_825893bb_20e6_48d6_932a_2e0da07ede8f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_881d6c10_0fb5_49ef_b20b_96a85304b624
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5b03cd76_4716_45a6_b670_94d349138af8
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2136eaa6_b87d_448b_99f2_b870f9229821
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fc07f530_4dcf_4e5c_997e_b087e0552ec2
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#da7836b9_cf2e_4db8_b5a5_6426724b45bf
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_48049be7_c85c_486d_b3d5_ddfe314f0c12
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#db77bc6c_86d3_43cf_9f72_995c8df75701
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f72b14bc_77a6_4286_955a_8ea1f8b12b6a
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: 5-Methylcytosine[e] <=> 5-Methylcytosine[p] Confidence Level: 2
fast: false
reversible: true
name: 5-Methylcytosine transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#b2a868f7_d1d4_47ba_b86a_9d5e3ff2febe
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Nitrite[e] <=> Confidence Level:
fast: false
reversible: false
name: Nitrite exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_474f7e8f_19e7_4be2_aab6_6479c93305f4
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: heme[e] <=> heme[p] Confidence Level: 2
fast: false
reversible: true
name: heme transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#a53a8aca_ea5e_40a7_8c80_6cd71776ad6e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7618eb00_1747_461a_8608_807976334138
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_15d1fc05_8bbb_4adb_b8de_2614a2cf93a4
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c557a92c_6627_4903_b7e7_d22066e7c6e8
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8d749277_a03f_4065_b427_68227ab907b8
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5fa1eb52_8be5_46c8_b781_71c2379e37c0
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#cd585c41_9907_4b5d_ada1_0aad841e04e0
reversible: true
notes: GPR_ASSOCIATION: RSP_3963 or RSP_0747 GENE_LIST: RSP_3963; RSP_0747; SUBSYSTEM: Fatty acid biosynthesis Equation: (R)-3-Hydroxybutanoyl-CoA + NADP+ <=> Acetoacetyl-CoA + NADPH + H+ Confidence Level: 3
name: Acetoacetyl-CoA reductase
fast: false
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#b656ec11_22c4_45b7_a8ec_81be45312b45
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_743a7fa9_b7b5_4f11_b228_cb65e0211487
type: Reaction
notes: GPR_ASSOCIATION: RSP_1592 or RSP_0579 GENE_LIST: RSP_1592; RSP_0579; SUBSYSTEM: Propanoate metabolism Equation: ATP + Propanoate + CoA <=> AMP + Diphosphate + Propanoyl-CoA Confidence Level: 2
name: acyl-CoA sythetase
fast: false
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#_01a7b499_3872_4d34_b8ab_4f09b1fac774
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_32d605c6_6305_48ac_adf5_820f248795d6
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8568efda_f81e_4140_ae72_964ba7fac6f0
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 4-Coumarate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_2f3b3185_fb34_4c7b_8da4_9c87783d0584
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a9406c69_3aa9_46ca_bcf2_d1c326efcb8e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9ab6a879_98ea_4eb5_80f1_b4cf99811cd4
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Glutathionedisulfide[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_4c511465_f68f_4772_8019_005ef11e1bae
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a5881a46_2191_4914_8f18_b57888ef7174
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Phosphatidylglycerophosphate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_7e7f7c50_0d42_4fae_a9ee_ee33c74d0e90
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Hypoxanthine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#fca1f8fd_485b_461e_a4ce_551c9b16c4f7
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d3b3cfe2_2d83_4277_80a2_dc1586cdbad9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_7021a6a7_ceec_4c2f_a9a3_32d8b0ee007d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6313bedd_87e4_40d4_8585_83d4f39a1306
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_364cbb66_4c51_4bb1_b0db_d45985198e87
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d0e26dc3_3609_4ddc_b9c8_053d2b76d44c
notes: GPR_ASSOCIATION: RSP_2304 GENE_LIST: RSP_2304; SUBSYSTEM: Riboflavin metabolism Equation: ATP + Riboflavin <=> ADP + FMN + H+ Confidence Level: 2
fast: false
reversible: true
name: FMN adenylyltransferase / riboflavin kinase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_981defc8_f034_41cb_bd39_7d3110be62cd
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_24b3ef42_5b11_451c_8a94_56219016b738
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f5dbd02a_d78f_4a03_9225_f21e1a500487
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c82fab23_9895_4bd5_81fa_4a23aa0387ce
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b5ef9e2d_2d94_41b5_8de9_e18d608a6f59
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: (R)-Malate[e] <=> Confidence Level:
fast: false
reversible: false
name: (R)-Malate exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#ac114be6_c5a3_4a96_a3f8_74d8827a757f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_61f4aeaf_f3f4_4f89_a7fa_324b67606529
name: ABC D-Alanyl-D-alanine transporter
notes: GPR_ASSOCIATION: (RSP_0804 and RSP_0805 and RSP_0806 and RSP_0807) or (RSP_0803 and RSP_0805 and RSP_0806 and RSP_0807) or (RSP_1451 and RSP_1452 and RSP_1453 and RSP_1454) or (RSP_3524 and RSP_3523 and RSP_3522 and RSP_3520) or (RSP_3525 and RSP_3523 and RSP_3522 and RSP_3520) or (RSP_3248 and RSP_3249 and RSP_3250 and RSP_3251) or (RSP_3255 and RSP_3257 and RSP_3258 and RSP_3252) or (RSP_0704 and RSP_0703 and RSP_0702 and RSP_0701) or (RSP_3231 and RSP_3232 and RSP_3235 and RSP_3236) or (RSP_3231 and RSP_3232 and RSP_3235 and RSP_3235) or (RSP_2702 and RSP_2700 and RSP_2701 and RSP_2703) GENE_LIST: RSP_0804; RSP_0805; RSP_0806; RSP_0807; RSP_0803; RSP_0805; RSP_0806; RSP_0807; RSP_1451; RSP_1452; RSP_1453; RSP_1454; RSP_3524; RSP_3523; RSP_3522; RSP_3520; RSP_3525; RSP_3523; RSP_3522; RSP_3520; RSP_3248; RSP_3249; RSP_3250; RSP_3251; RSP_3255; RSP_3257; RSP_3258; RSP_3252; RSP_0704; RSP_0703; RSP_0702; RSP_0701; RSP_3231; RSP_3232; RSP_3235; RSP_3236; RSP_3231; RSP_3232; RSP_3235; RSP_3235; RSP_2702; RSP_2700; RSP_2701; RSP_2703; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine[p] <=> ADP + H+ + Orthophosphate + L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine Confidence Level: 3
type: Reaction
fast: false
reversible: false

http://identifiers.org/biomodels.db/MODEL1304240000#_06239902_5b99_456f_abef_745bd678470f
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_29d2e236_e079_4f7c_b2d8_bdeb2e99a0c9
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_74921d8e_e3a0_4033_b7c7_f6691573928b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_88cfdaf8_17fd_4f46_aa90_3661da6809a0
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_44fc38c2_ce9a_4351_93fb_8f5c7123954f
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Acetaldehyde[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#d32b9329_3a68_4606_8233_3cbae858c5b3
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f6ad565b_4130_4852_b9f7_9412314040ee
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b906a3e9_3f4c_4bba_ab5c_7c6b5f7897a3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ab477251_0e8d_44ad_bb4a_3b4177d60d1f
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a42a71cd_e316_42c2_b7c5_41e5f5b01108
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Dimethylallyldiphosphate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b6988355_97d1_40f9_b456_31d9c8219f2e
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6fe34456_7981_4e3a_b389_3df50d989f57
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_617d1179_29ad_44dd_9064_af3a8412dc01
type: Reaction
reversible: true
name: spheroidene monooxygenase
notes: GPR_ASSOCIATION: RSP_0272 GENE_LIST: RSP_0272; SUBSYSTEM: Carotenoid biosynthesis Equation: 2-Ketospirilloxanthin + 2 Reduced ferredoxin + 2 Oxygen + 4 H+ <=> 2,2'-Diketospirilloxanthin + 2 Oxidized ferredoxin + 3 H2O Confidence Level: 3
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_45a578f4_146c_474b_9f77_f689deca0efc
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c5026162_7a01_4cc4_8c40_b6ac4b5b9858
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2de6a785_ce2e_4bcf_a6ba_61bfb06a1cd9
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0f4e43f6_3603_4da6_9e32_3d5413d6df31
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_406bff69_d6b1_47c2_9788_75dd535f4e79
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a7d689c9_8329_49b4_af69_6327dccce0f1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#af7ff836_c3a0_45ca_a6c4_ad6625ff510a
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Imidazole-4-acetate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_1b34dfec_b42a_44c1_b483_52c22785ef89
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_99db147f_1a4a_4ccb_834d_98ee349df97c
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Xanthosine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_111b64d9_285e_4e28_96e3_9780a9856d78
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9a21abad_84b4_4a3f_a32f_434b4ef14435
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Riboflavin[e] <=> Confidence Level:
fast: false
reversible: false
name: Riboflavin exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#fcdf8617_8593_41fc_b55d_1feebaaa2071
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c0cc5ba4_eab7_4fac_8bb1_138c6f387ab5
notes: GPR_ASSOCIATION: RSP_2956 or RSP_3268 GENE_LIST: RSP_2956; RSP_3268; SUBSYSTEM: Pentose phosphate pathway Equation: D-Fructose 6-phosphate + D-Glyceraldehyde 3-phosphate <=> D-Erythrose 4-phosphate + D-Xylulose 5-phosphate Confidence Level: 3
reversible: true
type: Reaction
name: transketolase
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#b86a9e8a_302b_49e9_8a81_07fd09c27440
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_819272dd_9423_46b6_bd84_771d75da22a0
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_73587139_995d_419e_bec6_538b2af8e144
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_85e148c7_8927_4b2f_b37b_c30dffd31dfa
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_06bcc03e_0316_4154_8c5c_390a589efc2f
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1101b93e_0dcd_41d6_8c53_a04722810f91
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bdaa3141_491c_4ae5_932f_1405195ebefd
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f6e980ef_1430_4c2a_a167_8d9ef402a5f1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f06b4123_ff66_48d9_9dbe_f75612cb05bc
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b5968b12_8a03_477b_bcba_84e14aa3e96f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d772aa37_ac55_403b_abd8_33f449b2d410
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a2946369_1c1e_4d2f_8057_ddc5c0ada8fd
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a1f96a2b_ff60_49bd_89ad_2b4c0675ffc8
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_254d3bba_f9ec_4583_8cb3_7e07ea504ab0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2c536c29_0a22_45d4_abb4_f533f4e2d1cd
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9b8941d3_00bf_4ba5_beb3_a180ee68f291
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a416473e_aadf_4f9c_844e_799e511ca334
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fc7b52e0_23e1_4152_8e97_c79c0126d44e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a0266615_e449_484c_85a9_537a9049db16
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5cfd00e8_8686_4cc7_80c8_2a6e5829b816
reversible: true
notes: GPR_ASSOCIATION: RSP_2824 GENE_LIST: RSP_2824; SUBSYSTEM: Porphyrin and chlorophyll metabolism Equation: S-Adenosyl-L-methionine + Precorrin 3B <=> S-Adenosyl-L-homocysteine + Precorrin 4 + H+ Confidence Level: 2
fast: false
type: Reaction
name: precorrin-3 methyltransferase

http://identifiers.org/biomodels.db/MODEL1304240000#_249fcb0c_eb99_4291_a86d_bb5359fb2118
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_244c9595_250f_4dd3_af3d_134f2e7b49ce
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c3ece62f_b6cd_4443_8d6d_d3c0c5060aba
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_061d6f22_0964_4bd8_98e6_497a93709c00
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3215884d_41e5_4697_9c2f_6e217f408c40
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9c8a1318_e922_4f47_9a33_6db35ce9e9c3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0ee3a8de_470d_435e_8afa_fcea664814fa
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c26e5902_93f2_4d39_bb44_c4c1e9ed3aa4
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a1f274c8_7ebd_45d1_a9d6_e0791c26207f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c050708c_3cbf_40dc_926f_b63dfb467133
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a9de65d7_33bc_4944_b812_add9fcc914a1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_945e1376_cf0a_407c_9d14_903d5d05e970
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_79a059ef_b6a8_46fa_bad6_5eaa5702354b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8c4b9199_2820_4af9_a573_b2778b11ebc9
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3bd1b16f_dfa2_4257_95c1_db09a27eac85
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9ae65cf1_abd3_42c6_8f47_b385276a4101
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_61adbff1_a9c9_4f83_9f1d_8f7e24a5685b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_919b8082_4765_4677_bd13_54da90c3457b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e107aab9_0a09_40f5_bf83_2aa875ad45b1
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0bf87b89_bd9c_4f97_8f5e_5378a6b7ac17
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_09c9cc8a_5c88_4404_a8e9_6e3d2b0194ad
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0da3619d_9b47_4f36_99c7_669d65a4eb78
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_3b53e89a_54f5_4658_ae95_39d7a1488299
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2a87cfd1_ae55_42cb_a2f5_647f8069a05e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#aa8403f7_6d1b_457f_9e8e_5ef6bb47f82e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_237dcdf7_65a8_45c6_a799_2667bcfc0e51
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5e756dd9_4d92_4b20_8d88_e22cdbf1923c
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#eb23867f_9d43_4e01_a20c_bfdd45d63668
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Ala-His
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#e80dd593_f115_4e47_8976_d17aa4e3c65f
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6719479a_27cf_40c3_abed_92cbae0bd0d9
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_768404cb_a506_455c_aa35_40af050f6c22
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_97fa7320_6ca0_48dd_83ed_93ca9bed88de
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: zinc[e] <=> zinc[p] Confidence Level: 2
fast: false
reversible: true
name: zinc transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_277624d7_7d98_4a27_95dd_49c2436cd678
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e0972e01_f99f_4b99_9660_0a79800be28d
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_0d21df83_6794_45f6_a49b_e4b26a42b49b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f7579758_38f3_4728_98ed_fd82ed389700
type: Reaction
reversible: true
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: Glycolaldehyde[p] + H+[p] <=> Glycolaldehyde + H+ Confidence Level: 1
fast: false
name: Glycolaldehyde via proton symport

http://identifiers.org/biomodels.db/MODEL1304240000#_20fe65d7_8deb_44b4_9ccc_a2deaff81c88
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#efaf352a_7606_4370_885b_db0be90b58fa
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_070cbd4f_e336_4386_9337_7437374169ba
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_85f69e38_f94c_463e_98bc_5975c6f2b65a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c5ae8859_5bc5_4e49_a7e7_b61a51bf2c30
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#b19dda9d_3702_4289_86da_5bdd27306a67
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6187d53f_f39d_48b7_bd72_a6cad30aaa22
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_36c788e2_c565_47b4_ab48_319f631944a6
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5733ee1e_5892_4f6e_b9b4_a5f85e42eda9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2d2a4be8_4b7d_4634_9efa_ab0028d82d3d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ddaf3444_8a5d_453f_bc64_efd832c7a31b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#f7232feb_0fb5_493c_911b_be13db8781e3
stoichiometry: 0.27332564777702
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_25a9b95c_68a0_48e1_b41c_e037c3bc2451
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#be02585f_1d35_4b20_9b26_d3e3d09a989b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0c70faf4_bad1_4645_a644_0d6e0c907cd2
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_91fec2b1_0d82_46a6_a65a_83270d2aee7f
name: Thymidine transport via proton symport
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: Thymidine[p] + H+[p] <=> Thymidine + H+ Confidence Level: 1
reversible: true
fast: false
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_36451cc8_0546_4cbf_97fc_cfc44dd19b79
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d358ffe1_b2ab_410a_b795_64cecb21dce0
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bc471673_d087_485b_a67e_748c12a1b82d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fc8cbbfc_b0b0_44c8_8811_6044deb11ad7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_35d63001_80b4_4dc6_a472_d6dbfc52e2db
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e3409ba1_3b3d_41c4_a1ae_838571cf0654
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_41b92932_d04c_4402_9ca4_8ca76e7f7bec
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#d43b553c_cc2d_456c_a223_c0ffa5b01124
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d9d60d26_a954_4be3_b645_c8efd82cff34
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c7d70d52_809e_4fb3_96e7_512693a3f70f
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_53d9a36c_f399_46aa_a6ad_59b126acac53
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e86587e2_c212_456a_9f64_022a26d60b87
reversible: true
type: Reaction
notes: GPR_ASSOCIATION: RSP_0264 GENE_LIST: RSP_0264; SUBSYSTEM: Carotenoid biosynthesis Equation: Hydroxyspirilloxanthin + S-Adenosyl-L-methionine <=> Spirilloxanthin + S-Adenosyl-L-homocysteine Confidence Level: 3
name: hydroxyneurosporene-O-methyltransferase
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#e754a469_112e_464a_a7f2_96037b35d895
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#cf43d8b5_7264_4ddf_8dd8_1d6948f25371
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a0ac58cb_264f_4429_8918_829f2e7c50c9
stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c77b3aa5_3feb_40b8_973c_61207930c85d
stoichiometry: 4.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2d65deae_efac_442d_a913_359e268ea9f9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4d4a305a_3ccf_4ffe_88ed_fdd99644acf9
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Co2
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#ba606c7b_3f12_4dc8_a811_aea2fd111ec7
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_53840444_3cad_4904_a840_d28f8e124b58
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Succinamic Acid[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_4474def4_2141_4491_b6e9_ac52e6f4b633
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4dcd88ff_4430_4476_85b2_c520d0facf54
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fd324959_66c1_4398_80f5_da4472506320
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6eb4e70f_2da5_4ace_8dd8_8e5755d68d1d
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_716a7475_ffde_4a16_a8b3_a3c0109a61c3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0480f175_54e8_4427_bc34_79054d61abf8
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_76f226d1_f4f2_470b_91d4_8dc06dcd17ed
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#cb588584_e9b9_4ab0_846c_93b6c86e2ed7
value: 1000.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Phosphatidate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_67f6ae9a_c39f_48c2_b6a1_03269f419b6e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ba5ea6af_6cf2_4e09_8a00_35c449886204
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_728d0eca_fffb_4264_93a2_665d5ea657c2
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#cb8d3940_01a4_45a1_848b_e4e97f08a9a5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_00a95e6a_36cc_4376_afdb_93ac98497317
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_158c96b8_88a7_4c7f_a3eb_5a260420b2bf
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1b02ffcc_0bc8_4a68_8c2b_f5d322538962
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9c41af0a_7291_4c3f_a8f8_c05ab83c0aea
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a5d1a503_ddae_4d5e_8cce_460f03ba180e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#db24da81_dbf0_4051_97d2_bd5a1a8e28ad
fast: false
reversible: true
name: malate dehydrogenase
type: Reaction
notes: GPR_ASSOCIATION: RSP_0968 GENE_LIST: RSP_0968; SUBSYSTEM: Citrate cycle (TCA cycle) Equation: (S)-Malate + NAD+ <=> Oxaloacetate + NADH + H+ Confidence Level: 4

http://identifiers.org/biomodels.db/MODEL1304240000#_2190e378_d1d5_4ff4_8291_98271c0de545
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e3d3e45a_70bd_4b0a_8c2b_98036a81b027
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_34d993ed_f336_462d_b199_2346c75f22bf
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1cc84a01_3a3b_4196_b81f_6c4768c4f886
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_732f0b7c_a2cd_4c18_ac7b_b99ba60ada5b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f3cfeb97_6729_4d01_b9dd_cd1e50da0249
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9351a8d8_505b_4d99_9955_510b4e758268
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1b0b7958_7f50_4cd2_933e_1e39ee33fa11
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1bb94a64_c6bf_4649_8dad_e4cd4d9c7578
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_1f06a3a3_d649_4554_ac4d_2db39c73c959
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_164f3696_84d7_47df_b808_363a87cbcb8f
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type: SpeciesReference

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stoichiometry: 5.9E-5
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Hydroxyethylbacteriochlorophyllidea
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_2331736b_5034_47de_8b1d_901ea5c9c9c5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ba94b2c0_4717_4948_8406_576d097d6c6e
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a27f5e7a_24fc_4631_85f3_dab205868d15
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_12dcd524_765c_4ae9_93ce_b8caa00765f6
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_23874f85_82f7_4444_8093_7945d142b7eb
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#de9fa587_b0ba_4120_bb57_60a46f7ab5c8
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6d803ba2_bb43_442d_845c_ec9ad7d01620
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_307b4e90_0db9_402f_8d71_1f4bab615004
stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 0.28447
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fd0ba404_6691_48c6_85a3_367574b8e12b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bfbdc095_5569_44a1_acc7_ac8c9ba1dea6
type: Reaction
name: ABC Nitrate transporter
reversible: true
notes: GPR_ASSOCIATION: (RSP_3154 and RSP_3151 and RSP_3152 and RSP_3153) or (RSP_3154 and RSP_0180 and RSP_0181 and RSP_0179) GENE_LIST: RSP_3154; RSP_3151; RSP_3152; RSP_3153; RSP_3154; RSP_0180; RSP_0181; RSP_0179; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + Nitrate[p] <=> ADP + H+ + Orthophosphate + Nitrate Confidence Level: 2
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#bef9f869_6e84_4ce2_be17_e9181788f666
stoichiometry: 2.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_148258b1_6f0a_483e_9680_c3237418518e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e59af392_2252_4ea7_91ca_50b3780de0e9
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_54cda046_5035_418b_a009_6ff1624d8a70
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5fa3e0aa_df23_4151_b0e8_8b4bc413cd5c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_1924b8b7_65f7_43a1_9d8a_13eea67e2369
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9fced258_3998_4e41_a903_e899de22b5d6
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_77ab9704_c203_4f16_b8f4_434eed5e476e
type: Reaction
reversible: true
name: mannose-1-phosphate guanylyltransferase (GDP)
fast: false
notes: GPR_ASSOCIATION: RSP_0834 or RSP_4053 GENE_LIST: RSP_0834; RSP_4053; SUBSYSTEM: Fructose and mannose metabolism Equation: GDP + D-Mannose 1-phosphate + H+ <=> Orthophosphate + GDP-mannose Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#_0d1aa97c_3ff0_4b9f_9076_dd88de65b5c6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 6-Phospho-D-gluconate[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#bb51a933_c811_4252_895f_2cced188d7de
stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: alpha,alpha'-Trehalose6-phosphate
type: Species

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stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_17227fbb_9b30_4242_bc50_ed3fee1bb4a7
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_592a8838_c798_40c2_8207_2b972d193984
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: 4-Aminobutanoate[e] <=> 4-Aminobutanoate[p] Confidence Level: 1
fast: false
reversible: true
name: 4-Aminobutanoate transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_55612afe_8791_4294_9c5f_eb28b8bf1987
type: Reaction
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: Glyoxylate[p] + Sodium[p] <=> Glyoxylate + Sodium Confidence Level: 1
reversible: false
name: Glyoxylate via Na+ symport
fast: false

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c20c7d36_12fe_4660_b8c9_c4df9aa80ab0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_45865886_623a_40a6_be79_7a797a8153bb
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#f8a657e9_89b8_4d39_8d0c_4e41f4169612
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (2S)-methylsuccinyl-coA
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_7eb45d2f_059a_4506_9338_d5222d23705d
type: Reaction
fast: false
reversible: false
notes: GPR_ASSOCIATION: RSP_1387 GENE_LIST: RSP_1387; SUBSYSTEM: Purine metabolism Equation: AMP + H2O <=> Adenine + D-Ribose 5-phosphate Confidence Level: 2
name: AMP nucleosidase

http://identifiers.org/biomodels.db/MODEL1304240000#a54ea2f1_bde0_4ca7_a1db_51ccc8c2a630
stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_38a85c8a_85d0_4faa_8ca7_ddb8a5e820fe
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5ebefa83_3e91_496d_a272_4affa662013c
stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Oxalomalate[p]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b5f836fb_272c_4f24_a78f_9fc78d617650
value: 1000.0
type: LocalParameter

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type: Reaction
fast: false
notes: GPR_ASSOCIATION: RSP_0321 and RSP_0322 and RSP_0323 and RSP_0324 GENE_LIST: RSP_0321; RSP_0322; RSP_0323; RSP_0324; SUBSYSTEM: Nitrogen metabolism Equation: NADH + H+ + 2 Nitric oxide <=> Nitrous oxide + NAD+ + H2O Confidence Level: 3
name: nitric oxide reductase
reversible: false

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Ribulose
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#abed049b_d535_4deb_b3fe_b19625cdf5bc
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#fcc969da_c072_4e7e_aba2_be480b6a806f
stoichiometry: 1.0
type: SpeciesReference

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fast: false
notes: GPR_ASSOCIATION: RSP_3742 and RSP_3744 and RSP_3745 GENE_LIST: RSP_3742; RSP_3744; RSP_3745; SUBSYSTEM: Transport, inner membrane Equation: ATP + H2O + L-cysteine[p] <=> ADP + H+ + Orthophosphate + L-cysteine Confidence Level: 2
name: ABC L-cysteine transporter
reversible: false
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#b9010441_b482_4395_8823_32ba2f9f7332
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_95be7494_a218_48fe_a0c6_4c874625ff0b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#abef7eaf_82be_423c_acbd_c3e892279b58
value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ea9d8b47_23ba_49c1_8f58_d69dc5c6e222
value: 1000.0
type: LocalParameter

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reversible: false
notes: GPR_ASSOCIATION: (RSP_0831 and RSP_1513) or (RSP_0831 and RSP_3585) GENE_LIST: RSP_0831; RSP_1513; RSP_0831; RSP_3585; SUBSYSTEM: Phenylalanine, tyrosine and tryptophan biosynthesis Equation: L-Serine + Indole <=> L-Tryptophan + H2O Confidence Level: 2
name: tryptophan synthase
type: Reaction
fast: false

http://identifiers.org/biomodels.db/MODEL1304240000#_0cdc64a3_1c34_4260_b76a_fcdb18dadd7c
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_132d438d_af4b_41b6_916e_609a396688a8
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e1dc76c4_3207_46e3_abf6_3f94ed0d3de6
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0373d533_1e61_4edb_aac5_cb4788dbc011
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#baa55fc9_3600_4dac_80c5_8f8d6811ecab
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6db489a1_7df9_4f80_afb7_134fc8a04e60
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_31a0f422_69a1_47f5_ae8b_bda06d86ac0b
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_11c8162d_35fd_4753_95b7_47781ce722bf
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Met-Ala[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b1c33f1e_0950_46fe_b410_39b86f0880ce
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#cf826a0f_5959_460c_8d0c_0d578a38fcba
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_292d86de_6768_412a_8fed_565f5d5697fc
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Potassium[e] <=> Confidence Level:
fast: false
reversible: false
name: Potassium exchange
type: Reaction

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Valyl-tRNA(Val)
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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reversible: false
type: Reaction
notes: GPR_ASSOCIATION: RSP_3218 GENE_LIST: RSP_3218; SUBSYSTEM: Porphyrin and chlorophyll metabolism Equation: Reduced FMN + Oxygen <=> Dimethylbenzimidazole + D-Erythrose 4-phosphate + H2O Confidence Level: 3

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value: 0.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (R)-2-Methylmalate[p]
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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name: 3-Hydroxypropionyl-CoA hydrolase
type: Reaction
fast: false
reversible: true
notes: GPR_ASSOCIATION: RSP_0155 GENE_LIST: RSP_0155; SUBSYSTEM: Propanoate metabolism Equation: 3-Hydroxypropanoate + CoA + H+ <=> 3-Hydroxypropionyl-CoA + H2O Confidence Level: 1

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stoichiometry: 1.0
type: SpeciesReference

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type: LocalParameter

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: dIDP
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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value: 1000.0
type: LocalParameter

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stoichiometry: 2.0
type: SpeciesReference

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fast: false
type: Reaction
notes: GPR_ASSOCIATION: ? GENE_LIST: SUBSYSTEM: Transport, inner membrane Equation: Aminoacetaldehyde[p] + H+[p] <=> Aminoacetaldehyde + H+ Confidence Level: 1
reversible: true
name: Aminoacetaldehyde via proton symport

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value: 1000.0
type: LocalParameter

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value: 1000.0
type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_3182 or RSP_2199 or RSP_0742 GENE_LIST: RSP_3182; RSP_2199; RSP_0742; SUBSYSTEM: Fatty acid biosynthesis Equation: 5-Methylhex-4-enoyl-CoA + FAD <=> (2E)-5-Methylhexa-2,4-dienoyl-CoA + FADH2 Confidence Level: 2
type: Reaction
name: Acyl-CoA dehydrogenase
reversible: true
fast: false

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type: SpeciesReference

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Decanoyl-CoA
type: Species

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

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notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: H2O[e] <=> H2O[p] Confidence Level: 2
fast: false
reversible: true
name: H2O transport via diffusion
type: Reaction

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value: 0.0
type: LocalParameter

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type: SpeciesReference

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type: LocalParameter

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type: SpeciesReference

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type: SpeciesReference

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type: LocalParameter

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type: LocalParameter

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type: LocalParameter

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type: SpeciesReference

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type: SpeciesReference

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value: -1000.0
type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Ubiquinone
type: Species

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type: SpeciesReference

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value: 1000.0
type: LocalParameter

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stoichiometry: 0.318272081825848
type: SpeciesReference

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boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 4-Coumarate[e]
type: Species

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value: -1000.0
type: LocalParameter

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type: SpeciesReference

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type: LocalParameter

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type: SpeciesReference

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type: SpeciesReference

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type: SpeciesReference

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value: 1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 5-Dehydro-D-gluconate[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_6d553f73_98b3_4042_b7f5_7381ee1b9478
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Selenide[e] <=> Confidence Level:
fast: false
reversible: false
name: Selenide exchange
type: Reaction

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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Magnesium
type: Species

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Hexanoyl-[acp]
type: Species

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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value: -1000.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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stoichiometry: 1.0
type: SpeciesReference

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value: 0.0
type: LocalParameter

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notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: L-histidine[e] <=> L-histidine[p] Confidence Level: 2
fast: false
reversible: true
name: histidine transport via diffusion
type: Reaction

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stoichiometry: 1.0
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value: 0.0
type: LocalParameter

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stoichiometry: 1.0
type: SpeciesReference

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Dimethylbenzimidazole
type: Species

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value: -1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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type: SpeciesReference

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value: 0.0
type: LocalParameter

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Homocysteine
type: Species

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value: 1000.0
type: LocalParameter

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value: 0.0
type: LocalParameter

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type: SpeciesReference

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value: -1000.0
type: LocalParameter

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type: SpeciesReference

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boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Dodecanoyl-[acyl-carrierprotein]
type: Species

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type: SpeciesReference

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type: LocalParameter

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value: 0.0
type: LocalParameter

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reversible: false
type: Reaction
fast: false
notes: GPR_ASSOCIATION: RSP_0425 and (RSP_4303 or RSP_4307 or RSP_4315 or RSP_4351 or RSP_4356) GENE_LIST: RSP_0425; RSP_4303; RSP_4307; RSP_4315; RSP_4351; RSP_4356; SUBSYSTEM: Aminoacyl-tRNA biosynthesis Equation: ATP + L-Methionine + tRNA(Met) <=> AMP + Diphosphate + L-Methionyl-tRNA(Met) Confidence Level: 2
name: methionyl-tRNA synthetase

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Nitrousoxide
type: Species

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constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Inositol1-phosphate
type: Species

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type: Reaction
fast: false
reversible: true
notes: GPR_ASSOCIATION: RSP_1815 GENE_LIST: RSP_1815; SUBSYSTEM: Glutathione metabolism Equation: ATP + gamma-L-Glutamyl-L-cysteine + Glycine <=> ADP + Orthophosphate + Glutathione Confidence Level: 3
name: glutathione synthetase

http://identifiers.org/biomodels.db/MODEL1304240000#afd17f5d_ac74_4a72_8732_ecc2d4d432b7
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Hydroxypropanoate[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_2a137ed3_fa16_4c59_a296_1aa9d92141f3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ab203335_f342_4fa1_a822_98fe3115707e
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_71e3e0ab_9caf_44b4_95d9_f627c38513ce
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2c297a94_6316_431f_8802_2335fdf0b204
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Inosine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_3f8aac70_3179_416c_b49e_733dfd0994a5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_889682b7_dcf4_4588_841f_1e9c017d6976
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#bbc20052_7e20_4203_a85b_4f46ed92d858
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e7a52a25_e45e_4573_8f4d_abc6dd59ca4b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a214fef0_839c_4384_8765_fdf1af504eab
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5a8e702a_5d73_411e_a419_668b9bfc6b9f
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Fe(III)dicitrate[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_931d6ba3_53da_4c67_843f_c84ffad50bff
notes: GPR_ASSOCIATION: GENE_LIST: SUBSYSTEM: Exchange reaction Equation: Malonate[e] <=> Confidence Level:
fast: false
reversible: false
name: Malonate exchange
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_9de03d57_0566_4435_b190_cb2904fd5cf4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#bd0c1a4d_1471_4fc0_8427_9bb6074fba91
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e2e4b218_e332_4fdf_b0f5_9fabf66992e0
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#db6140e6_313e_4e6a_8604_15b7e36b5ce3
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_0431393a_6fea_4228_a419_c7b1b864a546
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2c325b8c_537e_42b5_87b7_1f6def1fb2a5
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4ce2299a_ce57_4d8a_9f6e_1dd8cc57c6c4
notes: GPR_ASSOCIATION: RSP_2511 GENE_LIST: RSP_2511; SUBSYSTEM: Valine, leucine and isoleucine degradation Equation: (S)-3-Hydroxy-3-methylglutaryl-CoA <=> 3-Methylglutaconyl-CoA + H2O Confidence Level: 2
fast: false
reversible: true
name: enoyl-CoA hydratase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_37611f4d_c902_42ba_86d4_828c3d8bc1cb
notes: GPR_ASSOCIATION: RSP_0551 GENE_LIST: RSP_0551; SUBSYSTEM: Pyrimidine metabolism Equation: ATP + dUMP <=> ADP + dUDP Confidence Level: 2
type: Reaction
reversible: true
fast: false
name: thymidylate kinase

http://identifiers.org/biomodels.db/MODEL1304240000#_07a396a6_1a0d_4bf7_8539_7349440c10f0
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: (S,S)-Tartaric acid
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#cc250c9d_5c46_427e_9eaa_605174c4884a
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_07824f8b_f9b4_44b5_908d_426883756812
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_493b1dd2_c67d_41d7_aaa7_b7a7434b45e4
fast: false
notes: GPR_ASSOCIATION: RSP_1598 GENE_LIST: RSP_1598; SUBSYSTEM: Pyrimidine metabolism Equation: UMP + Diphosphate <=> Uracil + 5-Phospho-alpha-D-ribose Confidence Level: 2
type: Reaction
reversible: true
name: uracil phosphoribosyltransferase

http://identifiers.org/biomodels.db/MODEL1304240000#_3656fefe_944e_4684_b6af_6de6a2bd072d
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#c824690b_d849_4f3d_b32f_1d988bf054a5
stoichiometry: 3.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c72d2a3d_4b20_4464_a29b_38460615375c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a5d3e1ee_ad94_4d11_8877_10992685c35e
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#afc00895_21c1_4a1c_abef_774aaa95cf4d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_26ddebe1_d76a_4b93_b9e3_ae62870fbcc1
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_773e5104_d089_4889_9d8a_184bcbee3108
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_4abc91bc_9279_42ee_87b7_222fcba644f0
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b1273d44_17b8_4876_b947_a77de14eb81f
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Nickel[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b1ffde92_f1c6_476a_85ca_d03cfa1cbedc
notes: GPR_ASSOCIATION: RSP_0842 GENE_LIST: RSP_0842; SUBSYSTEM: Transport, outer membrane Equation: Malonate[e] <=> Malonate[p] Confidence Level: 1
fast: false
reversible: true
name: Malonate transport via diffusion
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_5840484e_fe73_40f0_8a05_f19a88dcd213
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_8e4f385c_60b4_45b8_88d6_b08e51995389
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_02d83ba2_0d32_4e24_b14f_24a3d05e08b6
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Hypoxanthine[p]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#ccd5ac76_a13f_4f58_b83b_fcafc0163c97
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d413cd78_965f_4e80_bbf3_14d07f25b973
name: putative hydroxyacylglutathione hydrolase (glyoxalase II) (GLX II) protein
type: Reaction
reversible: false
fast: false
notes: GPR_ASSOCIATION: RSP_2294 or RSP_0204 GENE_LIST: RSP_2294; RSP_0204; SUBSYSTEM: Pyruvate metabolism Equation: (R)-S-Lactoylglutathione + H2O <=> Glutathione + (R)-Lactate Confidence Level: 2

http://identifiers.org/biomodels.db/MODEL1304240000#d829b8e4_b337_4fcd_a842_f6c80c0fbd3e
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ad3a1d5f_b631_4a08_a251_fa982764fe24
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2eb82e4e_4a84_47db_b0b3_d1566e0d3fbc
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Alanyl-Glycine[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_30443c0a_db7c_4561_b27f_1f22614e9f87
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_8618e11d_562a_469b_91ed_681555e53b30
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_80ada6d0_db03_4052_9d0b_af087a5227d9
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_35252737_59c4_4b75_b57a_aa5b8dd33e2c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_4f3166c6_f863_403c_ae26_2c2515da372a
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c4c73c68_4a34_4cd3_8c95_0726e6ad768c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#fb774cfc_1fb1_41fb_a752_75cbdc27d056
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_715b4fa1_c7ae_42ef_934f_5cde0f49d088
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_03053842_6a32_4175_b6be_7f682c10c9bd
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: L-Serine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_798dc907_9355_41ec_938c_a4736209ca6b
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a4c85c31_8d6c_49e3_ae1e_3fc0a562d381
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#eab8adf0_2cc6_4425_b6eb_aa0e7268b767
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_488e514c_5a6d_416f_8b2c_e4d9a973e901
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#d35a465f_c6a7_4f9c_ab90_ceec14ef1c9b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#e8fdc11b_0044_4368_a83a_64b82a76ca3f
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_5b90f156_ff2a_432a_ba6e_4da125972332
type: Reaction
notes: GPR_ASSOCIATION: RSP_1350 GENE_LIST: RSP_1350; SUBSYSTEM: Phosphonate and phosphinate metabolism Equation: D-O-Phosphoserine + H2O <=> D-Serine + Orthophosphate Confidence Level: 2
reversible: false
fast: false
name: D-O-Phosphoserine phosphohydrolase

http://identifiers.org/biomodels.db/MODEL1304240000#_01d9eaaa_77ae_4942_9d64_847623e15b01
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: D-Serine
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#_1d9e4fa9_c7e9_4207_92f5_c235b003a328
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#ed1b4c71_6ba9_45e7_8615_4c072463b5f2
notes: GPR_ASSOCIATION: RSP_4045 or RSP_3270 or RSP_1283 GENE_LIST: RSP_4045; RSP_3270; RSP_1283; SUBSYSTEM: Pentose phosphate pathway Equation: Sedoheptulose 1,7-bisphosphate <=> Glycerone phosphate + D-Erythrose 4-phosphate Confidence Level: 2
fast: false
reversible: true
name: fructose-bisphosphate aldolase
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#f7d5743e_494f_4b9f_b349_9a89efab978b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#c9a6cde9_f480_4515_b332_c3022b7db9f8
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_31a44d61_5d37_4750_9a84_b61b3e6be488
value: -1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_331ce1da_cef1_4f1a_b41a_e8fa69bd3fc4
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3ae093cc_f347_4ce5_bb86_4246ff904aac
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_9a5141d1_01a8_488a_b714_86dea0b3f247
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#de9dac4b_1cf9_40d1_a5f0_f6d5c112c9af
constant: false
boundary condition: false
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: 3-Ureidopropionate
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#b8f81011_dde3_4c6f_846e_f966c2221000
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_9c1bcbc8_5ebc_4e4b_bd58_7d5f823fc66b
constant: false
boundary condition: true
has only substance units: false
initial concentration: NaN
initial amount: NaN
name: Gly-Glu[e]
type: Species

http://identifiers.org/biomodels.db/MODEL1304240000#bb1e376e_aff0_449d_929b_c1118db694b5
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#a275d63d_0d6d_41a4_9d25_54c205a33104
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#e2e966ca_94f5_44ad_8cea_8f86d725393c
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#dd118431_aea8_4172_9e7b_c147ba4a7c4d
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_2a6424dd_e7ef_458d_9df4_88ff049ed137
notes: GPR_ASSOCIATION: RSP_0859 GENE_LIST: RSP_0859; SUBSYSTEM: Valine, leucine and isoleucine biosynthesis Equation: 2-Oxobutanoate + CO2 + NADH <=> D-erythro-3-Methylmalate + NAD+ Confidence Level: 2
fast: false
name: 3-isopropylmalate dehydrogenase
reversible: true
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_532cfc28_513b_4c59_91d5_af561b212443
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a811fb40_e99b_4a0e_986f_2ab7fff70e8d
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_6ebac518_e012_41e2_a8b1_9eb27f6ee9e4
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_49505812_857e_43a5_918b_bd1df62cf360
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#cb70ddf2_c09b_4055_86ae_91acfce67554
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_5238ea64_5b8f_4ed4_a4f0_bbfe8309e134
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ed37ad95_9038_4099_8d35_de1c6878224b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_891c99db_7692_48f1_95fd_293a7b673da7
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_98bac7d4_4ab7_41ee_9265_668d17fbfe43
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_7b9702b0_fa64_4f56_b34c_cefd6f41be32
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_671d4d42_279c_4e59_a916_15264455ac05
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ee90ea13_12c4_4f29_94c1_03fbae35cd01
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#_30c7ceb2_15f3_4a7c_a655_a9278b03b145
value: 1000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#b0d2f283_32c6_407b_af09_3b56348c14bc
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#ef9cf41a_3c69_4d24_be33_fa686e30e102
reversible: false
name: Adenine via Na+ symport
fast: false
notes: GPR_ASSOCIATION: RSP_3174 GENE_LIST: RSP_3174; SUBSYSTEM: Transport, inner membrane Equation: Adenine[p] + Sodium[p] <=> Adenine + Sodium Confidence Level: 2
type: Reaction

http://identifiers.org/biomodels.db/MODEL1304240000#_28a46965_3590_434c_81db_5a0de3ffae2e
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_2c2f0f84_45ba_4a72_b2f1_b073f550230b
stoichiometry: 1.0
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1304240000#a2350f81_80ef_4517_8ecb_4591d5bdfb78
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_57cf7d25_010a_46e9_9659_c55f6358eac0
value: 0.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1304240000#_3e5f3188_2298_41e8_9be9_ccbb551a1653
stoichiometry: 1.0
type: SpeciesReference