http://identifiers.org/biomodels.db/MODEL1303260001#_3aaacb17_a1d2_4289_8aa1_58f405ada6e6
value: 0.9
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_7583c613_55bb_4422_bc1c_a4b73c64dd50
value: 0.08
type: LocalParameter

meta PYK
reversible: true
type: Reaction
is version of: http://identifiers.org/ec-code/2.7.1.40
is: R00200
name: pyruvate kinase
modifier: MODEL1303260001#
is: SBO:0000176
is version of: GO:0004743
fast: false

meta cell
is: GO:0005829
constant: true
size: 1.0
spatial dimensions: 3.0
name: cell
type: Compartment

http://identifiers.org/biomodels.db/MODEL1303260001#_006e9496_568f_457b_8faf_3c2378469325
stoichiometry: 1.0
species: meta P3G
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_152a4e4f_23ab_46ed_8b48_2c4da611a92e
name: mmol
type: SBMLUnitsDef

meta ENO1
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.171592988538958
initial amount: NaN
in compartment: meta cell
name: ENO1
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#_70e1837a_010a_4772_9921_a1ae4ced2983
value: 19.2
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_4feadc4c_90a3_4972_87e8_9ee28d16493d
exponent: -1.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

http://identifiers.org/biomodels.db/MODEL1303260001#_1b60453a_2f96_4e1e_b038_b2d0d922cfbd
constant: true
value: 1.59
type: Parameter

http://identifiers.org/biomodels.db/MODEL1303260001#_0399e0ba_3173_44e6_810b_a616c65c4cd0
value: 10.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_2eb43911_f085_4d6d_a113_feecd05078d1
exponent: 1.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

http://identifiers.org/biomodels.db/MODEL1303260001#_3d347c99_1893_4c79_8a88_76848a2d2214
stoichiometry: 1.0
species: meta EtOH
type: SpeciesReference

meta HXK2
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.0153328384926289
initial amount: NaN
in compartment: meta cell
name: HXK2
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#_1de291be_4ae7_419d_9669_92c632bd6390
stoichiometry: 1.0
species: meta DHAP
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#ab12df2b_a8bc_4e8b_988b_b67526fc9bdb
stoichiometry: 1.0
species: meta F16bP
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_3c46fda9_326c_4706_9a35_4d42838a7fe8
stoichiometry: 1.0
species: meta ATP
type: SpeciesReference

meta DHAP
boundary condition: false
name: dihydroxyacetone phosphate
type: Species
is: SBO:0000247
in compartment: meta cell
initial concentration: 0.290344213186674
is: C00111
initial amount: NaN
constant: false
is: CHEBI:16108
has only substance units: false

meta BPG
initial concentration: 7.36873499865602E-4
constant: false
in compartment: meta cell
type: Species
is: CHEBI:16001
has only substance units: false
boundary condition: false
initial amount: NaN
is: SBO:0000247
name: 1,3-bisphosphoglycerate
is: C00236

http://identifiers.org/biomodels.db/MODEL1303260001#_2a0e5417_0d8d_45d7_af9a_cd7281fb6598
value: 0.53
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_60763e8c_d9c2_4ad9_84b9_aa52ecf9c924
value: 1.5
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#b38b9acb_7220_44f9_8611_a1a1eb9edde5
stoichiometry: 1.0
species: meta ADP
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#da436f5f_ca49_4909_a954_eb5c75176d74
exponent: 1.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

http://identifiers.org/biomodels.db/MODEL1303260001#_32d7af01_63a1_48c7_9963_d05daa434823
units: dimensionless
value: 3.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_72debe28_beff_4445_96f3_30d5d5fd7392
value: 0.2
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#beb1077a_f924_40d5_84d2_ab9f8fb2a1fb
value: 0.21
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#dd057354_dc61_49e4_ac74_0ca882514370
value: 0.111
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_762baecb_aef4_4f5d_b35f_fa699fe2803e
value: 0.658333333333333
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_94a72942_5534_49c7_9ca8_a08a04e94c32
stoichiometry: 2.0
species: meta AcAld
type: SpeciesReference

meta GLC
has only substance units: false
initial amount: NaN
in compartment: meta cell
is: SBO:0000247
type: Species
is: CHEBI:4167
is: C00031
constant: false
name: glucose
boundary condition: false
initial concentration: 1.5700004483456

meta PGK
is: SBO:0000176
is version of: GO:0004618
type: Reaction
reversible: true
modifier: MODEL1303260001#
is version of: http://identifiers.org/ec-code/2.7.2.3
is: R01512
name: 3-phosphoglycerate kinase
fast: false

http://identifiers.org/biomodels.db/MODEL1303260001#e96b0f28_a4bc_4a38_868c_e42b185d8a49
stoichiometry: 3.0
species: meta NADH
type: SpeciesReference

meta TPI1
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.073589454911377
initial amount: NaN
in compartment: meta cell
name: TPI1
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#_86f99370_e27b_4004_bab2_e3c45a0ac6d5
stoichiometry: 1.0
species: meta GLY
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_7fa86f37_2627_4278_8497_4109100f0b99
value: 0.53
type: LocalParameter

meta ADH5
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.00106249605621922
initial amount: NaN
in compartment: meta cell
name: ADH5
type: Species

meta PDC5
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.00308868608169189
initial amount: NaN
in compartment: meta cell
name: PDC5
type: Species

meta TPI
is version of: GO:0004807
is: R01015
reversible: true
modifier: MODEL1303260001#
is version of: http://identifiers.org/ec-code/5.3.1.1
is: SBO:0000176
name: triosephosphate isomerase
type: Reaction
fast: false

http://identifiers.org/biomodels.db/MODEL1303260001#_540a5a0f_ae39_49f2_a733_b023a39eda76
stoichiometry: 1.0
species: meta SUC
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#d7f93066_4220_4e96_b272_90cbdb194a3a
constant: true
value: 6.022140000000001E20
name: Avogadro constant
type: Parameter

meta extracellular
is: GO:0005576
constant: true
size: 1.0
spatial dimensions: 3.0
name: extracellular
type: Compartment

http://identifiers.org/biomodels.db/MODEL1303260001#_0f2f686f_9dc6_48b1_ac3a_d7c021f648af
units: dimensionless
value: 0.29
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_035b9b95_a788_4c9d_b119_adcd6424b1d1
stoichiometry: 2.0
species: meta G6P
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_174b0726_e4a6_4d7d_98e2_b248fa1c16c1
value: 0.93
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_4822055d_9cf9_4ba3_b1b6_794729b07f06
units: dimensionless
value: 4300.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#db0024ea_e5df_444b_b6d7_aa685e0ee524
value: 0.3
type: LocalParameter

meta ENO2
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.493611573294543
initial amount: NaN
in compartment: meta cell
name: ENO2
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#_6926fb3e_2661_446f_9543_81e4e6fe5dd8
stoichiometry: 1.0
species: meta GAP
type: SpeciesReference

meta PYK2
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.00151748381804475
initial amount: NaN
in compartment: meta cell
name: PYK2
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#_1559ac07_166f_405f_b804_49c2dc6c65d0
value: 4.33
type: LocalParameter

meta HXK
fast: false
is: R02848
modifier: MODEL1303260001#
name: hexokinase
type: Reaction
is version of: GO:0004396
is: SBO:0000176
is version of: http://identifiers.org/ec-code/2.7.1.1
reversible: true

meta ATP
initial amount: NaN
name: ATP
initial concentration: 4.29
is: C00002
is: SBO:0000247
is: CHEBI:15422
in compartment: meta cell
has only substance units: false
boundary condition: false
constant: false
type: Species

meta PDC6
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.0016352160527653
initial amount: NaN
in compartment: meta cell
name: PDC6
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#_8fd1b172_ccb1_4b33_be9a_e56bcb79cce1
value: 0.023
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_31ca81c7_dd45_4d49_a316_a13670167709
value: 0.71
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_1a73c8d7_7f0c_4fe7_b4d9_2c9775506c7a
units: dimensionless
value: 0.0174
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_13dcdce1_c59d_408b_8586_343c8e16fefc
units: dimensionless
value: 3200.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_7ae88ce8_7d94_41c5_8099_98194a4a7369
stoichiometry: 1.0
species: meta ATP
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_187ef85a_7d0c_47f6_9565_3cc0bf2b36f1
exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND
type: SBMLUnit

http://identifiers.org/biomodels.db/MODEL1303260001#a4ba05d7_c949_4938_9607_2761ebddbeb2
stoichiometry: 1.0
species: meta BPG
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_5a801cb4_6bf2_42d1_b599_dc1f22f58fde
stoichiometry: 1.0
species: meta P2G
type: SpeciesReference

meta trehalose branch
type: Reaction
modifier: MODEL1303260001#
reversible: false
fast: false
is: SBO:0000176
is version of: GO:0005992
name: trehalose branch

http://identifiers.org/biomodels.db/MODEL1303260001#_1a9033e4_a6fc_4024_8907_341390f9362d
stoichiometry: 1.0
species: meta NADH
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#ac3adc8e_207f_4d1b_9540_874dd46b7947
stoichiometry: 1.0
species: meta PEP
type: SpeciesReference

meta PFK2
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.00975915538330228
initial amount: NaN
in compartment: meta cell
name: PFK2
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#_5dcb25e5_52fa_429a_9dd0_3bf0a8c55ffb
value: 0.003
type: LocalParameter

meta EtOH
is: CHEBI:16236
initial amount: NaN
is: C00469
has only substance units: false
is: SBO:0000247
name: ethanol
initial concentration: 55.472577854384
constant: true
in compartment: meta cell
boundary condition: true
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#d400e729_32fc_4ae4_a024_acc0b21a9cee
constant: false
units: dimensionless
value: NaN
type: Parameter

meta TDH2
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.0
initial amount: NaN
in compartment: meta cell
name: TDH2
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#_3086ea95_828a_4d52_ad64_1d3aecab621e
stoichiometry: 1.0
species: meta G6P
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#dc973758_caac_4d76_8ff6_e44bbe1b0423
value: 16.6666666666667
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_96cad77b_b1c9_4ee3_9c13_d6f9fec113b2
units: dimensionless
value: 5.12
type: LocalParameter

meta AMP
initial amount: NaN
is: SBO:0000247
boundary condition: true
has only substance units: false
in compartment: meta cell
is: C00020
constant: false
is: CHEBI:16027
type: Species
name: AMP
initial concentration: 0.44

meta AcAld
is: SBO:0000247
name: acetaldehyde
in compartment: meta cell
constant: false
is: CHEBI:15343
type: Species
is: C00084
initial concentration: 0.178140579850657
boundary condition: false
has only substance units: false
initial amount: NaN

http://identifiers.org/biomodels.db/MODEL1303260001#d0e27c96_8cc2_49fb_8412_63b4b659d712
stoichiometry: 1.0
species: meta AcAld
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_44e5c5da_95e1_4344_82e2_121441fcfc79
stoichiometry: 1.0
species: meta NAD
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_0fe7adcb_d18c_4fc2_98bd_3e8e2c2717c5
value: 0.01480424934314
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_749049fa_dfe2_4e13_9935_e1d8dfccafb0
stoichiometry: 1.0
species: meta ADP
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_12cfd681_5c04_4154_8ea0_84a7e1602142
stoichiometry: 1.0
species: meta F16bP
type: SpeciesReference

meta ADP
initial concentration: 1.29
type: Species
is: CHEBI:16761
is: C00008
boundary condition: false
constant: false
name: ADP
is: SBO:0000247
initial amount: NaN
in compartment: meta cell
has only substance units: false

http://identifiers.org/biomodels.db/MODEL1303260001#_0353fae0_bbc2_43eb_baef_6b8d1d6fa69d
stoichiometry: 1.0
species: meta NAD
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#ac6f3351_9d05_446b_81da_f98f58308263
value: 1.57816666666667
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_0ff34dff_670e_4f9a_bddc_1d90b77c0f7b
units: dimensionless
value: 0.045
type: LocalParameter

meta TRH
name: trehalose
constant: true
boundary condition: true
initial concentration: 0.00384697134241316
is: CHEBI:16551
is: C01083
has only substance units: false
in compartment: meta cell
is: SBO:0000247
type: Species
initial amount: NaN

meta G6P
constant: false
initial amount: NaN
type: Species
name: glucose 6-phosphate
has only substance units: false
is: CHEBI:17665
is: SBO:0000247
initial concentration: 0.193120800911304
in compartment: meta cell
boundary condition: false
is: C00668

meta PFK1
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.0116962574765781
initial amount: NaN
in compartment: meta cell
name: PFK1
type: Species

meta TDH1
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.087716160700349
initial amount: NaN
in compartment: meta cell
name: TDH1
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#_0902a509_7c09_4919_accc_83a9b48df779
stoichiometry: 1.0
species: meta GLC
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#bfe09531_395d_4997_ac4b_3b8b0100aaad
exponent: -1.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

http://identifiers.org/biomodels.db/MODEL1303260001#_0434ee05_43c8_4fbe_9aef_3c12caec3a2f
stoichiometry: 1.0
species: meta ATP
type: SpeciesReference

meta GPM1
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.182500074724267
initial amount: NaN
in compartment: meta cell
name: GPM1
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#_81ca3cc0_c3cf_454f_95a4_194599e59fd0
value: 1.1
type: LocalParameter

meta PDC
is version of: GO:0004737
fast: false
is: SBO:0000176
type: Reaction
is: R00636
reversible: false
name: pyruvate decarboxylase
modifier: MODEL1303260001#
is version of: http://identifiers.org/ec-code/4.1.1.1

http://identifiers.org/biomodels.db/MODEL1303260001#cf439010_25db_48e8_84e1_18ce2915c4fb
stoichiometry: 1.0
species: meta TRH
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_3cef8db7_4ed1_4eb4_b994_a128146542b5
stoichiometry: 1.0
species: meta P3G
type: SpeciesReference

meta HXK1
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.0041951864287446
initial amount: NaN
in compartment: meta cell
name: HXK1
type: Species

meta PFK
reversible: false
is: SBO:0000176
name: phosphofructokinase
fast: false
is: R00756
is version of: GO:0003872
is version of: http://identifiers.org/ec-code/2.7.1.11
type: Reaction
modifier: MODEL1303260001#

meta ADH1
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.0409771277320022
initial amount: NaN
in compartment: meta cell
name: ADH1
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#d1a1b7df_70e5_40f5_82b8_05532731cc2f
units: dimensionless
value: 6500.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_6cc82e04_2192_4e5b_b30b_c0b5371c52a5
units: dimensionless
value: 0.45
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_516044b0_3aa9_4700_b5e4_60cdc1aeda35
value: 0.785166666666667
type: LocalParameter

meta PDC1
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.266952694557084
initial amount: NaN
in compartment: meta cell
name: PDC1
type: Species

meta glycerol branch
reversible: false
fast: false
has version: http://identifiers.org/ec-code/1.1.1.8
has part: R00842
name: glycerol branch
has part: R07298
has version: http://identifiers.org/ec-code/3.1.3.21
modifier: MODEL1303260001#
type: Reaction
is: SBO:0000176
is version of: GO:0006114

http://identifiers.org/biomodels.db/MODEL1303260001#fa1a1c00_01bd_4c76_a188_7a4a8e718839
stoichiometry: 1.0
species: meta NAD
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_2eec10f6_70e0_4e0d_8ef7_e41b3745b054
stoichiometry: 1.0
species: meta DHAP
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#a7b200c3_fa77_476d_bcd1_ab7b0c046451
stoichiometry: 1.0
species: meta GLCx
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#e6136d41_0662_4f47_b6a2_a04793a4635f
stoichiometry: 1.0
species: meta AMP
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#a6d5b084_205c_4b8a_9ccd_d8a14ab5677f
value: 0.0098
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#c57db27b_b52d_4d71_9d7f_a8cd2b8430bb
stoichiometry: 1.0
species: meta F6P
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#fdaea58b_925a_4e7a_a999_d153be6930c3
value: 0.92
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#f83176fa_9a23_484b_b49a_1a896309e9b2
value: 17.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#de432f98_8a10_406a_8a54_f5e5a82687dd
value: 0.5
type: LocalParameter

meta SUC
in compartment: meta cell
boundary condition: true
initial amount: NaN
is: CHEBI:30031
name: succinate
constant: true
initial concentration: 0.0
has only substance units: false
type: Species
is: SBO:0000247
is: C00042

http://identifiers.org/biomodels.db/MODEL1303260001#de52f6b3_b46d_4df5_b94a_b44fbbba9c87
value: 2.4
type: LocalParameter

meta CDC19
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.512097526792801
initial amount: NaN
in compartment: meta cell
name: CDC19
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#_4d02ad98_a1e3_46df_b288_b453b248a42b
stoichiometry: 1.0
species: meta GAP
type: SpeciesReference

meta NADH
has only substance units: false
type: Species
is: CHEBI:16908
in compartment: meta cell
initial concentration: 0.0867096979846952
initial amount: NaN
is: C00004
constant: false
boundary condition: true
name: NADH
is: SBO:0000247

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name: per second
type: SBMLUnitsDef

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value: 3.35
type: LocalParameter

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units: dimensionless
value: 0.66
type: LocalParameter

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value: 0.00592169973725601
type: LocalParameter

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stoichiometry: 1.0
species: meta P2G
type: SpeciesReference

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constant: false
value: NaN
name: glycerate phosphates
type: Parameter

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value: 0.14
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#dcc4360d_b127_4f13_be0d_b2eeb2871150
value: 2.0
type: LocalParameter

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name: mM
type: SBMLUnitsDef

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is: R00127
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is version of: GO:0004017
reversible: true
fast: false
name: adenylate kinase
is: SBO:0000176
type: Reaction

meta P2G
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is: SBO:0000247
boundary condition: false
has only substance units: false
initial amount: NaN
is: C00631
is: CHEBI:17835
type: Species
in compartment: meta cell

meta glycogen branch
fast: false
modifier: MODEL1303260001#
is version of: GO:0005978
name: glycogen branch
is: SBO:0000176
type: Reaction
reversible: false

meta F6P
name: fructose 6-phosphate
boundary condition: false
constant: false
initial amount: NaN
in compartment: meta cell
is: CHEBI:16084
type: Species
initial concentration: 0.0588603054728053
is: C05345
has only substance units: false
is: SBO:0000247

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scale: 0
multipler: 1.0
kind: LITRE
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units: dimensionless
value: 0.397
type: LocalParameter

meta succinate branch
type: Reaction
modifier: MODEL1303260001#
is version of: GO:0006105
is: SBO:0000176
name: succinate branch
fast: false
reversible: false

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stoichiometry: 1.0
species: meta ATP
type: SpeciesReference

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value: 0.237257345562943
type: LocalParameter

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units: dimensionless
value: 0.00533412710224736
type: LocalParameter

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name: mM per second
type: SBMLUnitsDef

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value: 1.0
type: LocalParameter

meta ATPase
is version of: GO:0016887
type: Reaction
name: ATPase
fast: false
is: SBO:0000176
reversible: false
modifier: MODEL1303260001#

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stoichiometry: 1.0
species: meta PYR
type: SpeciesReference

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stoichiometry: 3.0
species: meta NAD
type: SpeciesReference

meta F26bP
is: C00665
is: SBO:0000247
is: CHEBI:28602
has only substance units: false
initial amount: NaN
name: fructose 2,6-bisphosphate
constant: true
boundary condition: true
type: Species
in compartment: meta cell
initial concentration: 0.003

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stoichiometry: 1.0
species: meta ATP
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meta GLCx
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initial concentration: 74.0
boundary condition: true
initial amount: NaN
is: CHEBI:4167
constant: true
is: SBO:0000247
name: glucose
is: C00031
type: Species
in compartment: meta extracellular

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value: 0.031
type: LocalParameter

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stoichiometry: 1.0
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type: SpeciesReference

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name: per mM per second
type: SBMLUnitsDef

meta TDH
reversible: true
is: R01061
modifier: MODEL1303260001#
is version of: http://identifiers.org/ec-code/1.2.1.12
is: SBO:0000176
type: Reaction
fast: false
name: glyceraldehyde phosphate dehydrogenase
is version of: GO:0004365

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stoichiometry: 1.0
species: meta DHAP
type: SpeciesReference

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value: 0.069
type: LocalParameter

meta GLY
initial concentration: 0.15
is: SBO:0000247
has only substance units: false
constant: true
is: CHEBI:17754
name: glycerol
boundary condition: true
type: Species
in compartment: meta cell
initial amount: NaN
is: C00116

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value: 0.3
type: LocalParameter

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stoichiometry: 1.0
species: meta BPG
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_941d0c4f_aa4d_43b4_ba40_d2786c2936a3
value: 7500.0
type: LocalParameter

meta ENO
reversible: true
name: enolase
is: R00658
fast: false
is: SBO:0000176
modifier: MODEL1303260001#
is version of: http://identifiers.org/ec-code/4.2.1.11
type: Reaction
is version of: GO:0004634

meta glycogen
in compartment: meta cell
boundary condition: true
initial concentration: 0.0
initial amount: NaN
type: Species
is: CHEBI:28087
is: C00182
has only substance units: false
constant: true
name: glycogen
is: SBO:0000247

http://identifiers.org/biomodels.db/MODEL1303260001#c98546e1_b430_496c_b55e_3d72e68e667d
stoichiometry: 2.0
species: meta ADP
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_67ff6f50_658b_4640_83ce_19609fcb7d29
value: 3.36
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_0f6f5d48_0807_47f7_8f49_d82702bb2602
units: dimensionless
value: 0.0845
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#c5880a23_a223_473b_89cd_bc5b209d6830
value: 6.82E-4
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_667b7942_96f7_4f98_a238_a3e705b3d6e9
value: 0.4
type: LocalParameter

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exponent: 1.0
scale: 0
multipler: 1.0
kind: LITRE
type: SBMLUnit

meta HXT
type: Reaction
fast: false
name: glucose transport
modifier: MODEL1303260001#
is: SBO:0000185
is version of: GO:0015758
reversible: true

http://identifiers.org/biomodels.db/MODEL1303260001#_6a360dbd_91e3_4c8d_9e8b_a1f4f6af0efc
value: 111.334973497906
type: LocalParameter

meta GLK1
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.0112717406104807
initial amount: NaN
in compartment: meta cell
name: GLK1
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#c4752f35_ab34_4879_ab83_93af683eaed6
value: 1.2
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_7292095b_0c59_4aee_a2a5_9419ad11a583
stoichiometry: 1.0
species: meta ADP
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_82d804d8_f1ef_4e61_a04e_364282817ce8
stoichiometry: 1.0
species: meta ADP
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_3b7a9511_de9e_46bd_98bd_861709b6e027
units: dimensionless
value: 0.91
type: LocalParameter

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stoichiometry: 1.0
species: meta GLC
type: SpeciesReference

meta TDH3
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 1.05110118662137
initial amount: NaN
in compartment: meta cell
name: TDH3
type: Species

meta F16bP
is: C05378
is: SBO:0000247
name: fructose 1,6-bisphosphate
in compartment: meta cell
has only substance units: false
is: CHEBI:28013
type: Species
boundary condition: false
initial amount: NaN
initial concentration: 1.14580464751733
constant: false

http://identifiers.org/biomodels.db/MODEL1303260001#_032d5acc_d255_40f9_93ae_3ca78ceef8f3
value: 0.65
type: LocalParameter

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exponent: -1.0
scale: 0
multipler: 1.0
kind: LITRE
type: SBMLUnit

http://identifiers.org/biomodels.db/MODEL1303260001#dfe2264b_ab67_480a_b920_103bdbeeb817
value: 14.2966666666667
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_49c75700_8642_460b_8153_9cced16a1f82
value: 90.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_530892c9_2a1b_482c_91d7_a6c0ce78cbc3
value: 0.08
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_7049f1bf_438b_45e1_abaa_22553f1e3118
units: dimensionless
value: 1.9
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_5ddec800_8d3e_4188_a0ed_cf1bd7d1cb9f
value: 3.945
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_584a4b1a_0ac5_482f_9a36_59fa1e50de64
value: 0.23
type: LocalParameter

meta FBA
fast: false
is version of: http://identifiers.org/ec-code/4.1.2.13
modifier: MODEL1303260001#
is: SBO:0000176
reversible: true
is: R01068
name: fructosebisphosphate aldolase
type: Reaction
is version of: GO:0004332

http://identifiers.org/biomodels.db/MODEL1303260001#dc6b0179_2f47_48bc_b819_683a4dbfa9ae
stoichiometry: 1.0
species: meta ADP
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_4d92a24b_ccdc_40b0_8c90_cb4088d44410
value: 0.15
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_8fe72282_b9a0_46aa_963d_539347e45711
stoichiometry: 1.0
species: meta PYR
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#a52a8489_6f8c_49ca_a123_ed3b8428ca94
value: 1.4
type: LocalParameter

meta PGI
type: Reaction
modifier: MODEL1303260001#
fast: false
is version of: GO:0004347
is: R00771
reversible: true
name: phosphoglucose isomerase
is version of: http://identifiers.org/ec-code/5.3.1.9
is: SBO:0000176

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stoichiometry: 1.0
species: meta ADP
type: SpeciesReference

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exponent: -1.0
scale: 0
multipler: 1.0
kind: SECOND
type: SBMLUnit

meta P3G
is: SBO:0000247
boundary condition: false
has only substance units: false
constant: false
is: CHEBI:17794
is: C00197
initial amount: NaN
initial concentration: 0.117456252783611
in compartment: meta cell
name: 3-phosphoglycerate
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#_7ace656b_a124_4414_a367_161c4f1a3454
value: 1.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#a3671980_a884_4861_97f6_c2016a7de1a9
value: 0.09
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#f965a966_da9f_456b_8040_52a832db1409
constant: true
value: 6.02
type: Parameter

http://identifiers.org/biomodels.db/MODEL1303260001#_4ae521fb_1dce_4279_b0b2_cbd2a7964ddb
units: dimensionless
value: 2000.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_3a7d3cdd_9f16_445c_8799_9c3b4574443b
stoichiometry: 1.0
species: meta GAP
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meta NAD
name: NAD
is: C00003
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is: CHEBI:15846
constant: false
in compartment: meta cell
has only substance units: false
type: Species
boundary condition: false
is: SBO:0000247
initial amount: NaN

MODEL1303260001
species: meta GLK1
species: meta ADH5
species: meta PYR
species: meta FBA1
species: meta ATP
reaction: meta glycogen branch
name: reversible michaelis-menten: two noncompeting couples
reaction: meta succinate branch
name: irreversible mass action
species: meta PDC1
species: meta DHAP
reaction: meta ENO
species: meta PDC5
reaction: meta FBA
area units: area
is: http://identifiers.org/taxonomy/4932
species: meta NAD
species: meta GLC
reaction: meta AK
species: meta P3G
species: meta SUC
species: meta ADH1
species: meta ENO1
reaction: meta glycerol branch
species: meta AMP
reaction: meta PGK
species: meta F26bP
name: reversible mass action
reaction: meta PGI
species: meta GLY
type: SBMLModel
name: reversible michaelis-menten: one substrate, one product
reaction: meta ADH
reaction: meta PYK
species: meta TDH3
length unit: length
reaction: meta PFK
species: meta F6P
species: meta HXK2
species: meta PEP
species: meta PGI1
reaction: meta HXT
species: meta ADP
species: meta EtOH
species: meta PDC6
species: meta TDH2
species: meta BPG
name: reversible michaelis-menten: ordered bi-bi
initial assignment: MODEL1303260001#
species: meta PYK2
species: meta P2G
species: meta GPM1
species: meta glycogen
species: meta NADH
species: meta AcAld
reaction: meta GPM
name: Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 01
notes: Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 01 This model is described in the article: A model of yeast glycolysis based on a consistent kinetic characterization of all its enzymes Kieran Smallbone, Hanan L. Messiha, Kathleen M. Carroll, Catherine L. Winder, Naglis Malys, Warwick B. Dunn, Ettore Murabito, Neil Swainston, Joseph O. Dada, Farid Khan, Pınar Pir, Evangelos Simeonidis, Irena Spasić, Jill Wishart, Dieter Weichart, Neil W. Hayes, Daniel Jameson, David S. Broomhead, Stephen G. Oliver, Simon J. Gaskell, John E.G. McCarthy, Norman W. Paton, Hans V. Westerhoff, Douglas B. Kell, Pedro Mendes FEBS Letters (in press) Abstract: We present an experimental and computational pipeline for the generation of kinetic models of metabolism, and demonstrate its application to glycolysis in Saccharomyces cerevisiae. Starting from an approximate mathematical model, we employ a “cycle of knowledge” strategy, identifying the steps with most control over flux. Kinetic parameters of the individual isoenzymes within these steps are measured experimentally under a standardised set of conditions. Experimental strategies are applied to establish a set of in vivo concentrations for isoenzymes and metabolites. The data are integrated into a mathematical model that is used to predict a new set of metabolite concentrations and reevaluate the control properties of the system. This bottom-up modelling study reveals that control over the metabolic network most directly involved in yeast glycolysis is more widely distributed than previously thought. This model is hosted on BioModels Database and identified by: MODEL1303260001 . To cite BioModels Database, please use: BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models . To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more …
species: meta PFK1
species: meta PFK2
species: meta TRH
name: facilitated diffusion: symmetrical carrier
curated: false
reaction: meta PDC
species: meta G6P
species: meta GLCx
name: phosphofructokinase kinetics with Keq
name: max
species: meta PGK1
name: reversible michaelis-menten: ordered uni-bi
reaction: meta ATPase
species: meta TDH1
species: meta ENO2
reaction: meta trehalose branch
species: meta TPI1
species: meta F16bP
reaction: meta TPI
species: meta GAP
compartment: meta extracellular
compartment: meta cell

meta FBA1
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.0367018202831552
initial amount: NaN
in compartment: meta cell
name: FBA1
type: Species

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stoichiometry: 1.0
species: meta NADH
type: SpeciesReference

meta GPM
reversible: true
is: R01518
fast: false
name: phosphoglyceromutase
is version of: http://identifiers.org/ec-code/5.4.2.1
modifier: MODEL1303260001#
type: Reaction
is version of: GO:0004619
is: SBO:0000176

http://identifiers.org/biomodels.db/MODEL1303260001#a824de9c_df1f_465f_b721_d54edf2a4b03
value: 0.06
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_7900407e_38c7_4b52_8e0e_84915b7f3ed7
value: 259.220125786164
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_6cd134c3_d96c_4c1a_a136_0ce73888ab3b
stoichiometry: 1.0
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stoichiometry: 1.0
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constant: false
units: dimensionless
value: NaN
type: Parameter

meta ADH
modifier: MODEL1303260001#
is: SBO:0000176
reversible: true
name: alcohol dehydrogenase
is version of: http://identifiers.org/ec-code/1.1.1.1
is: R00754
type: Reaction
is version of: GO:0004022
fast: false

http://identifiers.org/biomodels.db/MODEL1303260001#_9883b029_e6fd_410a_945c_98479c4609fa
value: 43.0833333333333
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#a8e35460_fe0b_4ca3_a3d2_0a80c7c336b4
value: 30.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_48278855_544e_42d4_aa3e_2112f249e669
stoichiometry: 1.0
species: meta AcAld
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_1552c082_4365_4b0f_900f_df7dbff23b33
value: 17.6
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#dd27fa5c_453c_4d21_ac7f_bc2a2bfaa253
stoichiometry: 1.0
species: meta F6P
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#_85456796_e75f_481f_8dc3_3194132b8927
units: dimensionless
value: 0.19
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_403f37d3_8de3_4160_837f_5b452431dc18
value: 0.0995
type: LocalParameter

meta GAP
initial amount: NaN
is: C00118
initial concentration: 0.0789727571926259
in compartment: meta cell
has only substance units: false
constant: false
type: Species
boundary condition: false
is: CHEBI:29052
is: SBO:0000247
name: glyceraldehyde 3-phosphate

http://identifiers.org/biomodels.db/MODEL1303260001#b93c8bc1_4c5a_4e2a_aa21_8d081b6ec60d
value: 21.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_6a9fc9bf_e265_4169_90b8_a5351768cb90
value: 0.3
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_6ebd8f61_412b_4e45_902a_6469b9d9aa5e
exponent: 1.0
scale: -3
multipler: 1.0
kind: MOLE
type: SBMLUnit

http://identifiers.org/biomodels.db/MODEL1303260001#_12ad4912_d857_4746_82f3_2b4c3b0ac42b
stoichiometry: 1.0
species: meta glycogen
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#dbfa9ca2_2005_4590_ac5c_24bd3507c81a
value: 0.1
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#bf412f86_6ca2_49ee_842f_9e2b1545e7f8
stoichiometry: 1.0
species: meta ATP
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http://identifiers.org/biomodels.db/MODEL1303260001#_4908305b_58ed_4c2f_a652_f831bbc033c3
exponent: -1.0
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http://identifiers.org/biomodels.db/MODEL1303260001#_2d427972_dcd8_49ce_920e_2a7d5ade5ecd
stoichiometry: 1.0
species: meta G6P
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#b7389812_7b5c_4907_b84e_bc9922bf9ea4
value: 1.83333333333333
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#ea1fd300_d9d9_4b9d_8482_d86fde77f0fd
units: dimensionless
value: 6.7
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_15b57163_670d_470e_b8f7_d5eed64ce05b
constant: true
units: litre
value: 2.0E-14
name: volume
type: Parameter

http://identifiers.org/biomodels.db/MODEL1303260001#_3a1a9648_f801_4884_bde8_98d38c1b35ac
value: 0.17
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_61b9941d_1e98_454e_a5ed_f8e0caa14015
stoichiometry: 1.0
species: meta G6P
type: SpeciesReference

meta PYR
in compartment: meta cell
boundary condition: false
is: CHEBI:15361
constant: false
type: Species
has only substance units: false
name: pyruvate
initial concentration: 0.527117851793548
is: SBO:0000247
initial amount: NaN
is: C00022

http://identifiers.org/biomodels.db/MODEL1303260001#_91315b74_c484_4e7e_b89d_1f465bbc0d7f
stoichiometry: 1.0
species: meta NADH
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#f28e15ad_f3d5_4fa4_ad93_1f9023ef8081
value: 0.04
type: LocalParameter

meta PGK1
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.0644142281647388
initial amount: NaN
in compartment: meta cell
name: PGK1
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#c73c497f_2611_409b_a09d_0b9768eedb3f
value: 1.11
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#d0a3947b_8154_443c_bf89_00ac770206fb
units: dimensionless
value: 800.0
type: LocalParameter

meta PEP
is: C00074
is: SBO:0000247
in compartment: meta cell
name: phosphoenolpyruvate
is: CHEBI:18021
initial amount: NaN
initial concentration: 0.152501353339511
type: Species
has only substance units: false
constant: false
boundary condition: false

http://identifiers.org/biomodels.db/MODEL1303260001#_23efab45_9b0f_4432_b3ac_9d137c5e0fcb
units: dimensionless
value: 14492.7536231884
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_59dcbb9e_ffbb_4221_a004_4e2943440175
name: per mmol
type: SBMLUnitsDef

meta PGI1
is: SBO:0000252
constant: true
boundary condition: true
has only substance units: false
initial concentration: 0.0345726768225249
initial amount: NaN
in compartment: meta cell
name: PGI1
type: Species

http://identifiers.org/biomodels.db/MODEL1303260001#_7c9d76aa_4ea9_4469_9308_c39347fe6233
value: 0.75
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_6652a2db_cf7a_4470_b148_7cdcefb2bfc5
stoichiometry: 1.0
species: meta ATP
type: SpeciesReference

http://identifiers.org/biomodels.db/MODEL1303260001#c9c22319_c16c_4ed2_80ba_e876dd734cb9
units: dimensionless
value: 100.0
type: LocalParameter

http://identifiers.org/biomodels.db/MODEL1303260001#_37f07f56_7dcb_4092_92b0_fd5c75b32ee9
value: 0.11
type: LocalParameter

W3 CDTF: Wed Nov 14 14:34:48 GMT 2012

ORG:
  orgname: University of Manchester
n:
  given: Kieran
  family: Smallbone

W3 CDTF: Sun Nov 09 00:00:00 GMT 2008